Citrus Sinensis ID: 020110

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-
Protein Sequence
MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPVEDAVRETVESLKAKGFLGQHVSQS
Secondary Structure (PSIPRED)
ccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEEccccccHHHHcccccccccEEEEEccccccccHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEccccccccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHcccccccccccccccEEHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHcccccccHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccHccccccEEEEcccHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHcccccHHccEEEEEcccccccHHHHHcccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHcEEEccccccccEEcccccccHHHHHHccccEHHHHHHHHHHHHHHHHHccccEEEEEccEEEcccccccccHHHHHHHHHHcccHHHHHHHHccEEcHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHcccccccccccccccccccEEEcHHHHHHcccEEccHHHHHHHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
MASEAEKEEETVCVTGANGFIGTWLVKTLLdnnytsinatvfpgsdsshlfalpgagdanlRVFEADVLDSGAVSRAVEGckgvfhvaspctledpvdpekeliLPAVQGTLNVLEAAKRFGVRRVVVTSSIsaivpnpgwkgkvfdetswtdleycksrkkwypvSKTLAEKAAWEFAEKHgvdvvaihpatclgplmqpylNASCAVLQQLLQgskdtqeyhwlgavpvkdVAKAQVLLFespaasgrylctnGIYQFGDFAERvsklfpefpvhrfdgetqpglipcKDAAKRLMDlglvftpvEDAVRETVESLKAkgflgqhvsqs
Flexible Loop (DISEMBL)
maseaekeeetvcvtgangFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTssisaivpnpgwkgkvfdetsWTDLeycksrkkwypVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFespaasgrylCTNGIYQFGDFAERVSKLFPEFPVhrfdgetqpglIPCKDAAKRLMDLGLVFTPVEDAVRETVESlkakgflgqhvsqs
Low Complexity Region (SEG)
MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPVEDAVRETVESLKAKGFLGQHVSQS
Disordered region (IsUnstruct)
**********TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPVEDAVRETVE***************
Disordered Region (DISOPRED)
*************VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPVEDAVRETVESLKAKG**G******
Disordered Region (DISEMBL)
***********VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPVEDAVRETVESLKAKGFLGQHVSQS
Disordered Region (DISPRO)
********EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPVEDAVRETVESLKAKGFLGQ*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPVEDAVRETVESLKAKGFLGQHVSQS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	331	2.2.26 [Sep-21-2011]
Q9S9N9	344	Cinnamoyl-CoA reductase 1	no	no	0.933	0.898	0.425	7e-57
Q500U8	326	Tetraketide alpha-pyrone	no	no	0.924	0.938	0.367	1e-55
Q9SAH9	332	Cinnamoyl-CoA reductase 2	no	no	0.924	0.921	0.413	5e-55
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.945	0.899	0.349	1e-48
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.945	0.902	0.346	4e-48
P51110	337	Dihydroflavonol-4-reducta	no	no	0.942	0.925	0.366	3e-47
P51102	382	Dihydroflavonol-4-reducta	no	no	0.936	0.811	0.379	3e-47
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.924	0.85	0.359	8e-46
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.909	0.850	0.348	3e-44
P14720	380	Dihydroflavonol-4-reducta	N/A	no	0.921	0.802	0.365	6e-44

>sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1

 Score =  221 bits (562), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/320 (42%), Positives = 197/320 (61%), Gaps = 11/320 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEAD 67
           +TVCVTGA G+I +W+VK LL+  YT +  TV    D  ++HL  L G G   L + +AD
Sbjct: 11  KTVCVTGAGGYIASWIVKILLERGYT-VKGTVRNPDDPKNTHLRELEG-GKERLILCKAD 68

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + D  A+  A++GC GVFH ASP T +DP    ++++ PAV G   V+ AA    V+RVV
Sbjct: 69  LQDYEALKAAIDGCDGVFHTASPVT-DDP----EQMVEPAVNGAKFVINAAAEAKVKRVV 123

Query: 128 VTSSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           +TSSI A+  +P    + V DE+ W+DL++CK+ K WY   K +AE+AAWE A++ GVD+
Sbjct: 124 ITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDL 183

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
           V ++P   LGP +QP +NAS   + + L GS  T        V V+DVA A VL++E+P+
Sbjct: 184 VVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS 243

Query: 247 ASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAAKRLMDLGLVFT 305
           ASGRYL        G+  E ++KLFPE+P+  +   E  P   P K   +++ DLGL FT
Sbjct: 244 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 303

Query: 306 PVEDAVRETVESLKAKGFLG 325
             + ++ +TV+SL+ KG L 
Sbjct: 304 STKQSLYDTVKSLQEKGHLA 323

Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 4EC: 4

>sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1

 Score =  217 bits (552), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 118/321 (36%), Positives = 199/321 (61%), Gaps = 15/321 (4%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVL 69
           VCVTGA+GF+ +WLVK LL   Y  I     PG++   +HL+ L GA +  LR+ +AD++
Sbjct: 8   VCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKE-RLRLVKADLM 66

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVV 128
           + G+   A+ GC+GVFH ASP  L+   +PE+E++ PA++GTLNVL + ++   ++RVV+
Sbjct: 67  EEGSFDNAIMGCQGVFHTASP-VLKPTSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVL 125

Query: 129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
           TSS S +     +  K+  DE+ WT +E CK  + WY +SKTLAE+AAW+F+E++G+D+V
Sbjct: 126 TSSSSTVRIRDDFDPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGIDLV 185

Query: 188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW---LGAVPVKDVAKAQVLLFES 244
            + P+  +GP + P L ++ + +  LL+G  +T+++ W   +G V + DVA+  +++FE 
Sbjct: 186 TVLPSFLVGPSLPPDLCSTASDVLGLLKG--ETEKFQWHGQMGYVHIDDVARTHIVVFEH 243

Query: 245 PAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAAKRLMDLGLV 303
            AA GRY+C++ +    +    +S  +P  P+  RF+   +   +       ++  LGL 
Sbjct: 244 EAAQGRYICSSNVISLEELVSFLSARYPSLPIPKRFEKLNR---LHYDFDTSKIQSLGLK 300

Query: 304 FTPVEDAVRETVESLKAKGFL 324
           F  +E+   + + SL  +G+L
Sbjct: 301 FKSLEEMFDDCIASLVEQGYL 321

Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1

 Score =  214 bits (546), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/317 (41%), Positives = 192/317 (60%), Gaps = 11/317 (3%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVL 69
           VCVTGA G+I +W+VK LL+  YT +  TV   +D  ++HL  L GA +  L +  AD+L
Sbjct: 8   VCVTGAGGYIASWIVKLLLERGYT-VRGTVRNPTDPKNNHLRELQGAKE-RLTLHSADLL 65

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           D  A+   ++GC GVFH ASP T +DP    + ++ PAV G   V++AA +  V+RVV T
Sbjct: 66  DYEALCATIDGCDGVFHTASPMT-DDP----ETMLEPAVNGAKFVIDAAAKAKVKRVVFT 120

Query: 130 SSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
           SSI A+  NP    + + DE  W+DL++CK+ K WY   K LAE++AWE A+  GVD+V 
Sbjct: 121 SSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDLVV 180

Query: 189 IHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
           ++P   LGP +Q  +NAS   + + L GS  T        V V+DVA   VL++E+P+AS
Sbjct: 181 LNPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYEAPSAS 240

Query: 249 GRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAAKRLMDLGLVFTPV 307
           GRY+        G+  E ++K FPE+P+  +   E  P   P K   +++ DLGL F P+
Sbjct: 241 GRYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGLEFKPI 300

Query: 308 EDAVRETVESLKAKGFL 324
           + ++ E+V+SL+ KG L
Sbjct: 301 KQSLYESVKSLQEKGHL 317

Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  193 bits (491), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/326 (34%), Positives = 189/326 (57%), Gaps = 13/326 (3%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVF 64
           E E+VCVTGA+GFIG+WLV  LL++ YT + ATV   ++     HL  LP A + +L ++
Sbjct: 4   ESESVCVTGASGFIGSWLVMRLLEHGYT-VRATVRDPTNQKKVKHLLDLPKA-ETHLTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           +AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P + G L++L+A ++    
Sbjct: 62  KADLADEGSFDEAIQGCSGVFHVATPMDFESK-DPENEVIKPTINGLLDILKACQKAKTV 120

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEK 181
           R +V +S +  V     +  V+DE++W+D+E+C+S K   W Y VSKTLAE+AAW++A++
Sbjct: 121 RKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKE 180

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAV-LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL 240
           + +D + I P   +GP + P +  S    L  +L+             V + D+  + + 
Sbjct: 181 NNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIY 240

Query: 241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAAKRLMD 299
           L+E P A GRY+C++      +  + + + +PE+ +  +F G     L P   ++K+L +
Sbjct: 241 LYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKG-IDDNLEPVHFSSKKLRE 299

Query: 300 LGLVFT-PVEDAVRETVESLKAKGFL 324
           +G  F   +ED     V++ +AKG +
Sbjct: 300 IGFEFKYSLEDMFVGAVDACRAKGLI 325

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  192 bits (487), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/326 (34%), Positives = 189/326 (57%), Gaps = 13/326 (3%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVF 64
           E E+VCVTGA+GFIG+WLV  LL++ YT + ATV   ++     HL  LP A + +L ++
Sbjct: 4   ESESVCVTGASGFIGSWLVMRLLEHGYT-VRATVRDPTNQKKVKHLLDLPKA-ETHLTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           +AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P + G L++L+A ++    
Sbjct: 62  KADLADEGSFDEAIQGCSGVFHVATPMDFESR-DPENEVIKPTINGLLDILKACQKAKTV 120

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEK 181
           R +V +S +  V     +  V+DE++W+D+E+C+S K   W Y VSKTLAE+AAW++A++
Sbjct: 121 RKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKE 180

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAV-LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL 240
           + +D + I P   +GP + P +  S    L  +L+             V + D+  + + 
Sbjct: 181 NNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIY 240

Query: 241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAAKRLMD 299
           L++ P A GRY+C++      +  + + + +PE+ +  +F G     L P   ++K+L +
Sbjct: 241 LYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKG-IDDNLEPVHFSSKKLRE 299

Query: 300 LGLVFT-PVEDAVRETVESLKAKGFL 324
           +G  F   +ED     V++ +AKG +
Sbjct: 300 IGFEFKYSLEDMFVGAVDACRAKGLI 325

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  189 bits (479), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 189/327 (57%), Gaps = 15/327 (4%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVF 64
           + ETVCVTGA+GFIG+WLV  LL+   T + ATV   ++     HL  LP A + +L ++
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERRLT-VRATVRDPTNVKKVKHLLDLPKA-ETHLTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
           +AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P ++G L ++++ A    V
Sbjct: 62  KADLADEGSFDEAIKGCTGVFHVATPMDFESK-DPENEVIKPTIEGMLGIMKSCAAAKTV 120

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
           RR+V TSS +  V     +  V+DE+ W+D+E+C+++K   W Y VSKTLAE+AAW++A+
Sbjct: 121 RRLVFTSS-AGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179

Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-VPVKDVAKAQV 239
           ++ +D + I P   +GP +   +  S       + G++        G  V + D+  A +
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI 239

Query: 240 LLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAAKRLM 298
            LFE+P A GRY+C++      D A+ + + +PE+ +   F G     L     ++K+L 
Sbjct: 240 YLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKG-VDENLKSVCFSSKKLT 298

Query: 299 DLGLVFT-PVEDAVRETVESLKAKGFL 324
           DLG  F   +ED     V++ +AKG L
Sbjct: 299 DLGFEFKYSLEDMFTGAVDTCRAKGLL 325

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score =  189 bits (479), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/329 (37%), Positives = 187/329 (56%), Gaps = 19/329 (5%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGS--DSSHLFALPGAGDANLRVF 64
           ++ETVCVTGA+GFIG+WLV  LL+  Y  + ATV  PG+     HL  LP A    L ++
Sbjct: 4   QKETVCVTGASGFIGSWLVMRLLERGYF-VRATVRDPGNLKKVQHLLDLPNAKTL-LTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
           +AD+ + G+   A+ GC GVFHVA+P   E   DPE E+I P V G L +++A  K   V
Sbjct: 62  KADLSEEGSYDDAINGCDGVFHVATPMDFESK-DPENEVIKPTVNGMLGIMKACVKAKTV 120

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
           RR V TSS   +      K  V+DE  W+DLE+  S+K   W Y VSKTLAEKAAW+FAE
Sbjct: 121 RRFVFTSSAGTVNVEEHQKN-VYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAE 179

Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA---VPVKDVAKA 237
           + G+D ++I P   +GP +   +  S  ++  L   +++   Y  +     V + D+  A
Sbjct: 180 EKGLDFISIIPTLVVGPFITTSMPPS--LITALSPITRNEAHYSIIRQGQYVHLDDLCNA 237

Query: 238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAAKR 296
            + L+E  AA GRY+C++        ++ +   +PE+ V   F+G     L   + ++K+
Sbjct: 238 HIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPSTFEG-VDENLKSIEFSSKK 296

Query: 297 LMDLGLVFT-PVEDAVRETVESLKAKGFL 324
           L D+G  F   +E+   E++E+ + KGFL
Sbjct: 297 LTDMGFNFKYSLEEMFIESIETCRQKGFL 325

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score =  184 bits (467), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/328 (35%), Positives = 188/328 (57%), Gaps = 22/328 (6%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVFEA 66
           ETVCVTGA+GFIG+WL+  LL+  YT + ATV    ++    HL  LP A   NL +++A
Sbjct: 23  ETVCVTGASGFIGSWLIMRLLERGYT-VRATVRDPDNTKKVQHLLDLPNA-KTNLTLWKA 80

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ + G+   AV+GC GVFH+A+P   E   DPE E+I P + G L++L++  +  +RRV
Sbjct: 81  DLHEEGSFDAAVDGCTGVFHIATPMDFESK-DPENEMIKPTINGMLDILKSCVKAKLRRV 139

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEKHG 183
           V TSS    V     +  V+DET W+ L++ +S K   W Y VSK LAE+AAW++A ++ 
Sbjct: 140 VFTSS-GGTVNVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENN 198

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA---VPVKDVAKAQVL 240
           ++ ++I P   +GP + P +  S  ++  L   ++    Y  +     V + D+  + + 
Sbjct: 199 LEFISIIPPLVVGPFIMPSMPPS--LITALSPITRTESHYTIIKQGQFVHLDDLCMSHIF 256

Query: 241 LFESPAASGRYL---CTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRL 297
           L+E+P A+GRY+   C   IY   D A+ + + +PE+ V     + +  +   + ++K+L
Sbjct: 257 LYENPKANGRYIASACAATIY---DIAKMLREEYPEYNVPTKFKDYKEDMGQVQFSSKKL 313

Query: 298 MDLGLVFT-PVEDAVRETVESLKAKGFL 324
            DLG  F   ++D     VES +AKG L
Sbjct: 314 TDLGFEFKYGLKDMYTAAVESCRAKGLL 341

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score =  179 bits (454), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/330 (34%), Positives = 179/330 (54%), Gaps = 29/330 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
           V VTGA+GF+G+WLV  LL   YT + ATV   ++   +  L  LPGA +  L +++AD+
Sbjct: 8   VVVTGASGFVGSWLVMKLLQAGYT-VRATVRDPANVEKTKPLLELPGAKE-RLSIWKADL 65

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVV 127
            + G+ + A+ GC GVFHVA+P    D  DPE E+I P V+G L+++ A K  G V+R+V
Sbjct: 66  SEDGSFNEAIAGCTGVFHVATPMDF-DSQDPENEVIKPTVEGMLSIMRACKEAGTVKRIV 124

Query: 128 VTSSISAI----VPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
            TSS  ++     P P      +D+ +W+D++YC+  K   W Y VSK LAEKAA E+A 
Sbjct: 125 FTSSAGSVNIEERPRPA-----YDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYAS 179

Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW-----LGAVPVKDVA 235
           ++G+D ++I P   +GP +   +  S      L+ G+    E H+     +  V + D+ 
Sbjct: 180 ENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGN----EAHYSILKQVQLVHLDDLC 235

Query: 236 KAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAK 295
            A   LFE P A+GRY+C++        A  +   FPE+ + +        L P   ++K
Sbjct: 236 DAMTFLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDIPQKFAGVDDNLQPIHFSSK 295

Query: 296 RLMDLGLVFT-PVEDAVRETVESLKAKGFL 324
           +L+D G  F    ED     + + + KG +
Sbjct: 296 KLLDHGFSFRYTTEDMFDAAIHTCRDKGLI 325

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2

 Score =  178 bits (451), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/328 (36%), Positives = 183/328 (55%), Gaps = 23/328 (7%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVFEAD 67
           TVCVTGA GFIG+WLV  LL+  Y +++ATV    +     HL  LP A D NL +++AD
Sbjct: 17  TVCVTGAAGFIGSWLVMRLLERGY-NVHATVRDPENKKKVKHLLELPKA-DTNLTLWKAD 74

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGVRRV 126
           +   G+   A++GC+GVFHVA+P   E   DPE E+I P V+G L+++E+ AK   V+R+
Sbjct: 75  LTVEGSFDEAIQGCQGVFHVATPMDFESK-DPENEVIKPTVRGMLSIIESCAKANTVKRL 133

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEKHG 183
           V TSS   +      K   +D+TSW+DL++  ++K   W Y  SK LAEKAA E A+K  
Sbjct: 134 VFTSSAGTLDVQEQQK-LFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKN 192

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL-----GAVPVKDVAKAQ 238
           +D ++I P   +GP + P    S      L+ G+    E H+        V + D+ +A 
Sbjct: 193 IDFISIIPPLVVGPFITPTFPPSLITALSLITGN----EAHYCIIKQGQYVHLDDLCEAH 248

Query: 239 VLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAAKRL 297
           + L+E P A GR++C++      D A+ V + +PE+ V   F G     L     ++K+L
Sbjct: 249 IFLYEHPKADGRFICSSHHAIIYDVAKMVREKWPEYYVPTEFKG-IDKDLPVVSFSSKKL 307

Query: 298 MDLGLVFT-PVEDAVRETVESLKAKGFL 324
            D+G  F   +ED  +  +++ + K  L
Sbjct: 308 TDMGFQFKYTLEDMYKGAIDTCRQKQLL 335

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	331
224129534	330	predicted protein [Populus trichocarpa]	0.981	0.984	0.792	1e-154
225465312	333	PREDICTED: bifunctional dihydroflavonol	0.990	0.984	0.787	1e-153
255556687	334	cinnamoyl-CoA reductase, putative [Ricin	0.993	0.985	0.761	1e-149
449478087	326	PREDICTED: tetraketide alpha-pyrone redu	0.963	0.978	0.761	1e-144
449431910	326	PREDICTED: tetraketide alpha-pyrone redu	0.963	0.978	0.758	1e-144
15226955	318	Rossmann-fold NAD(P)-binding domain-cont	0.951	0.990	0.722	1e-138
297817868	318	cinnamoyl-CoA reductase family [Arabidop	0.951	0.990	0.719	1e-137
147765772	293	hypothetical protein VITISV_004153 [Viti	0.873	0.986	0.701	1e-130
357448325	333	Dihydroflavonol-4-reductase [Medicago tr	0.984	0.978	0.669	1e-127
356555831	330	PREDICTED: bifunctional dihydroflavonol	0.987	0.990	0.688	1e-124

>gi|224129534|ref|XP_002328740.1| predicted protein [Populus trichocarpa] gi|222839038|gb|EEE77389.1| predicted protein [Populus trichocarpa]

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 260/328 (79%), Positives = 298/328 (90%), Gaps = 3/328 (0%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDAN--LRVF 64
           K++E VCVTGANGFIG+WLV+TLLD  YT I+A+++PGSD SHLF +PGA DA+  L VF
Sbjct: 3   KQKEAVCVTGANGFIGSWLVRTLLDQGYTKIHASIYPGSDPSHLFEIPGATDASVSLEVF 62

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           EADVLD  A+ +AVEGC+GVFHVASPCTLEDP DP++EL++PAVQGTLNVLEAAK+F VR
Sbjct: 63  EADVLDHDAICKAVEGCQGVFHVASPCTLEDPKDPQEELVMPAVQGTLNVLEAAKKFKVR 122

Query: 125 RVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           RVVVTSSISA+VPNP W + KVFDE+SWTDL+YCKSR+KWYPVSKTLAEKAAWEFA ++G
Sbjct: 123 RVVVTSSISALVPNPSWPREKVFDESSWTDLDYCKSRQKWYPVSKTLAEKAAWEFAGRNG 182

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +DVVAIHPATCLGPL+QP LNASCAVLQQLLQGS+DTQEYHWLGAV V+DVA+AQVLLFE
Sbjct: 183 MDVVAIHPATCLGPLLQPALNASCAVLQQLLQGSRDTQEYHWLGAVHVRDVARAQVLLFE 242

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLV 303
           +P ASGRYLCTNGIYQFGDFA  VS+LFPEFP+HRF GETQPGL  CKDA+K+L+DLGLV
Sbjct: 243 TPTASGRYLCTNGIYQFGDFAATVSRLFPEFPLHRFSGETQPGLRGCKDASKKLIDLGLV 302

Query: 304 FTPVEDAVRETVESLKAKGFLGQHVSQS 331
           FTPVED+VRETVESLKAKGFL   +SQS
Sbjct: 303 FTPVEDSVRETVESLKAKGFLRNEMSQS 330

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465312|ref|XP_002269382.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|297739432|emb|CBI29614.3| unnamed protein product [Vitis vinifera]

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 259/329 (78%), Positives = 300/329 (91%), Gaps = 1/329 (0%)

Query: 4   EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRV 63
           EA+K++E VCVTGANGFIG+WLV+TL+++ YT+I+A++FPGSD+SHLF+LPGA  A++ V
Sbjct: 5   EADKKKEAVCVTGANGFIGSWLVRTLVEHGYTTIHASIFPGSDASHLFSLPGAAAADIVV 64

Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           +EAD+LD+ AV+RAVEGC GVFHVASPC+LEDP DPEKEL++PAV+GT NVLEAA+RF V
Sbjct: 65  YEADLLDAEAVARAVEGCTGVFHVASPCSLEDPKDPEKELLMPAVEGTKNVLEAARRFQV 124

Query: 124 RRVVVTSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
           RRVV+TSSISA+VPNP W   + F+ETSWTDL YCKSR+KWYPVSKTLAEKAAWEFA KH
Sbjct: 125 RRVVLTSSISALVPNPSWPPNIPFNETSWTDLHYCKSRQKWYPVSKTLAEKAAWEFAGKH 184

Query: 183 GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF 242
           G+DVVAIHPATCLG L+QP LNASCAVLQQLL+GS +TQEYHWLGAV VKDVAKAQVLLF
Sbjct: 185 GIDVVAIHPATCLGELLQPRLNASCAVLQQLLEGSTETQEYHWLGAVHVKDVAKAQVLLF 244

Query: 243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGL 302
           E+PAASGRYLCT+GIYQF DFAERVSKLFPEFPVHRF GETQPG++ CKDAAKRL+DLGL
Sbjct: 245 ETPAASGRYLCTDGIYQFADFAERVSKLFPEFPVHRFIGETQPGMMACKDAAKRLIDLGL 304

Query: 303 VFTPVEDAVRETVESLKAKGFLGQHVSQS 331
           VFTPVEDAV++ VESLKAKGFL Q   QS
Sbjct: 305 VFTPVEDAVKDAVESLKAKGFLEQGKKQS 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556687|ref|XP_002519377.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223541444|gb|EEF42994.1| cinnamoyl-CoA reductase, putative [Ricinus communis]

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 256/336 (76%), Positives = 300/336 (89%), Gaps = 7/336 (2%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA---G 57
           MA++ +KE   VCVTGANGFIG+WL++TLL + YT+I+A+++P SD SHLF L  +   G
Sbjct: 1   MATQNKKE--AVCVTGANGFIGSWLIQTLLQHGYTTIHASIYPASDPSHLFHLISSSSHG 58

Query: 58  DA-NLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLE 116
           D  NL+++EAD+LD  A+ +AVEGC+GVFHVASPCTLE+P DPEKEL+LPAVQGT+NVLE
Sbjct: 59  DIINLKLYEADLLDYDAICKAVEGCQGVFHVASPCTLEEPKDPEKELVLPAVQGTINVLE 118

Query: 117 AAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA 175
           AA++F VRRVV+TSSISA+VPNP W  GKVFDE+SWTDL+YCKSR+KWYPVSK+LAEKAA
Sbjct: 119 AARKFKVRRVVLTSSISALVPNPNWPAGKVFDESSWTDLDYCKSRQKWYPVSKSLAEKAA 178

Query: 176 WEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA 235
           WEFAEKHG+DVVAIHP+TC+GPL+QP LNAS AVLQQLL+GSKDTQEYHWLGAV VKDVA
Sbjct: 179 WEFAEKHGMDVVAIHPSTCIGPLLQPSLNASSAVLQQLLEGSKDTQEYHWLGAVHVKDVA 238

Query: 236 KAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAK 295
           KAQVLLFE+P+ASGRYLCTNGIYQFGDFA+RVSKLFPEFPVH F GETQPGL  CKDAAK
Sbjct: 239 KAQVLLFEAPSASGRYLCTNGIYQFGDFADRVSKLFPEFPVHSFIGETQPGLTTCKDAAK 298

Query: 296 RLMDLGLVFTPVEDAVRETVESLKAKGFLGQHVSQS 331
           RL++LGLVFTPVEDAV E+VESL+AKGFL    S+S
Sbjct: 299 RLIELGLVFTPVEDAVGESVESLQAKGFLKHKTSES 334

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449478087|ref|XP_004155219.1| PREDICTED: tetraketide alpha-pyrone reductase 1-like [Cucumis sativus]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/323 (76%), Positives = 290/323 (89%), Gaps = 4/323 (1%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAG-DANLRVF 64
           KE+E VCVTGANGFIG+W+V+ LL++ YT+I+ ++FPGSDSSHL  L P    +ANLRVF
Sbjct: 5   KEKEPVCVTGANGFIGSWVVRALLESGYTTIHTSIFPGSDSSHLLNLLPSTNPNANLRVF 64

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           EAD++D  AV+RAVEGCKGVFH+ASPCTLEDPVDP+KEL+ PAVQGT+NVL AAK+FGVR
Sbjct: 65  EADLMDGEAVARAVEGCKGVFHIASPCTLEDPVDPQKELVEPAVQGTVNVLNAAKKFGVR 124

Query: 125 RVVVTSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           RVV+TSSISA+VPNPGW   + FDE+SWTDLEYC SRKKWYPVSKTLAEK+AWEFAE HG
Sbjct: 125 RVVLTSSISALVPNPGWPSHMPFDESSWTDLEYCISRKKWYPVSKTLAEKSAWEFAENHG 184

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +DVV+I PATCLGPL+QP LNASCAVLQQLL GS+DTQEYHWLGAV VKDVAKAQ+LLFE
Sbjct: 185 LDVVSILPATCLGPLLQPTLNASCAVLQQLLHGSQDTQEYHWLGAVHVKDVAKAQILLFE 244

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLV 303
           SP  SGRYLCTNGIYQF +FA++V+K+ P+FPVHRF GETQPGL+ CKDAAK+L+DLGLV
Sbjct: 245 SP-TSGRYLCTNGIYQFSEFADKVAKICPQFPVHRFVGETQPGLVTCKDAAKKLIDLGLV 303

Query: 304 FTPVEDAVRETVESLKAKGFLGQ 326
           FTP+E A+++TVESL++KGFL Q
Sbjct: 304 FTPLEVAIQDTVESLRSKGFLNQ 326

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449431910|ref|XP_004133743.1| PREDICTED: tetraketide alpha-pyrone reductase 1-like [Cucumis sativus]

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/323 (75%), Positives = 290/323 (89%), Gaps = 4/323 (1%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAG-DANLRVF 64
           KE+E VCVTGANGFIG+W+V+ LL++ YT+I+ ++FPGSDSSHL  L P    +ANLR+F
Sbjct: 5   KEKEPVCVTGANGFIGSWVVRALLESGYTTIHTSIFPGSDSSHLLNLLPSTNPNANLRIF 64

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           EAD++D  AV+RAVEGCKGVFH+ASPCTLEDPVDP+KEL+ PAVQGT+NVL AAK+FGVR
Sbjct: 65  EADLMDGEAVARAVEGCKGVFHIASPCTLEDPVDPQKELVEPAVQGTVNVLNAAKKFGVR 124

Query: 125 RVVVTSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           RVV+TSSISA+VPNPGW   + FDE+SWTDLEYC SRKKWYPVSKTLAEK+AWEFAE HG
Sbjct: 125 RVVLTSSISALVPNPGWPSHMPFDESSWTDLEYCISRKKWYPVSKTLAEKSAWEFAENHG 184

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +DVV+I PATCLGPL+QP LNASCAVLQQLL GS+DTQEYHWLGAV VKDVAKAQ+LLFE
Sbjct: 185 LDVVSILPATCLGPLLQPTLNASCAVLQQLLHGSQDTQEYHWLGAVHVKDVAKAQILLFE 244

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLV 303
           SP  SGRYLCTNGIYQF +FA++V+K+ P+FPVHRF GETQPGL+ CKDAAK+L+DLGLV
Sbjct: 245 SP-TSGRYLCTNGIYQFSEFADKVAKICPQFPVHRFVGETQPGLVACKDAAKKLIDLGLV 303

Query: 304 FTPVEDAVRETVESLKAKGFLGQ 326
           FTP+E A+++TVESL++KGFL Q
Sbjct: 304 FTPLEVAIQDTVESLRSKGFLNQ 326

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226955|ref|NP_178345.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|3894172|gb|AAC78522.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|28973736|gb|AAO64184.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|29824207|gb|AAP04064.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|110736834|dbj|BAF00375.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|330250482|gb|AEC05576.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 229/317 (72%), Positives = 279/317 (88%), Gaps = 2/317 (0%)

Query: 9   EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
           +ETVCVTGANGFIG+W+++TL++  YT I+A+++PGSD +HL  LPG+ D+ +++FEAD+
Sbjct: 3   KETVCVTGANGFIGSWIIRTLIEKGYTKIHASIYPGSDPTHLLQLPGS-DSKIKIFEADL 61

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           LDS A+SRA++GC GVFHVASPCTL+ PVDPEKEL+ PAV+GT+NVLEAAKRF VRRVV+
Sbjct: 62  LDSDAISRAIDGCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVI 121

Query: 129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
           TSSISA+VPNP W  KV  DE+SW+DL++CKSR+KWYP+SKTLAEKAAWEF+EKHG ++V
Sbjct: 122 TSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTNIV 181

Query: 188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
            IHP+TCLGPL+QP LNASCAVL QLLQGS +TQE+HWLG V VKDVAK  V+LFE+P A
Sbjct: 182 TIHPSTCLGPLLQPNLNASCAVLLQLLQGSTETQEHHWLGVVHVKDVAKGHVMLFETPDA 241

Query: 248 SGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPV 307
           SGR+LCTNGIYQF +FA  VSKLFPEF VH+FD ETQPGL  C DAAKRL++LGLVFT V
Sbjct: 242 SGRFLCTNGIYQFSEFAALVSKLFPEFAVHKFDKETQPGLTSCNDAAKRLIELGLVFTAV 301

Query: 308 EDAVRETVESLKAKGFL 324
           EDAV+ETV+SL+ KGFL
Sbjct: 302 EDAVKETVQSLRDKGFL 318

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817868|ref|XP_002876817.1| cinnamoyl-CoA reductase family [Arabidopsis lyrata subsp. lyrata] gi|297322655|gb|EFH53076.1| cinnamoyl-CoA reductase family [Arabidopsis lyrata subsp. lyrata]

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 228/317 (71%), Positives = 278/317 (87%), Gaps = 2/317 (0%)

Query: 9   EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
           +ETVCVTGANGFIG+W+++TL++  YT I+A+V+PGSD +HL  LPG+ D+ +++FEAD+
Sbjct: 3   KETVCVTGANGFIGSWIIRTLIEKGYTKIHASVYPGSDPTHLLKLPGS-DSKIKIFEADL 61

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           LDS A+SRA++GC GVFHVASPCTL+ PV+PEKEL+ PAV+GT+NVLEAAKRF VRRVV+
Sbjct: 62  LDSDAISRAIDGCAGVFHVASPCTLDPPVNPEKELVEPAVKGTINVLEAAKRFNVRRVVI 121

Query: 129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
           TSSISA+VPNP W  +V  DE+SWTDL++CKS +KWYP+SKTLAEKAAWEF+EKHG ++V
Sbjct: 122 TSSISALVPNPNWPERVPVDESSWTDLDFCKSMQKWYPISKTLAEKAAWEFSEKHGTNIV 181

Query: 188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
            IHP+TCLGPL+QP LNASCAVL QLLQGS +TQE+HWLG V V+DVAK  V+LFE+P A
Sbjct: 182 TIHPSTCLGPLLQPNLNASCAVLLQLLQGSTETQEHHWLGVVHVRDVAKGHVMLFETPEA 241

Query: 248 SGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPV 307
           SGR+LCTNGIYQF +FA  VSKLFPEF VHRFD ETQPGL  C DAAKRL++LGLVFT V
Sbjct: 242 SGRFLCTNGIYQFSEFAALVSKLFPEFAVHRFDKETQPGLTSCIDAAKRLIELGLVFTAV 301

Query: 308 EDAVRETVESLKAKGFL 324
           EDAV+ETV+SL+ KGFL
Sbjct: 302 EDAVKETVQSLRDKGFL 318

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147765772|emb|CAN68983.1| hypothetical protein VITISV_004153 [Vitis vinifera]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/328 (70%), Positives = 267/328 (81%), Gaps = 39/328 (11%)

Query: 4   EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRV 63
           EA+K++E VCVTGANGFIG+WLV+TL+++ YT+I+A++FPGSD+SHLF+LPGA  A++ V
Sbjct: 5   EADKKKEAVCVTGANGFIGSWLVRTLVEHGYTTIHASIFPGSDASHLFSLPGAAAADIVV 64

Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           +EAD+LD+ AV+RAVEGC GVFHVASPC+LEDP DPEKEL++PAV+GT NVLEAA+RF  
Sbjct: 65  YEADLLDAEAVARAVEGCTGVFHVASPCSLEDPKDPEKELLMPAVEGTKNVLEAARRF-- 122

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
                                                +KWYPVSKTLAEKAAWEFA KHG
Sbjct: 123 -------------------------------------QKWYPVSKTLAEKAAWEFAGKHG 145

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +DVVAIHPATCLG L+QP LNASCAVLQQLL+GS +TQEYHWLGAV VKDVAKAQVLLFE
Sbjct: 146 IDVVAIHPATCLGELLQPRLNASCAVLQQLLEGSTETQEYHWLGAVHVKDVAKAQVLLFE 205

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLV 303
           +PAASGRYLCT+GIYQF DFAERVSKLFPEFPVHRF GETQPG++ CKDAAKRL+DLGLV
Sbjct: 206 TPAASGRYLCTDGIYQFADFAERVSKLFPEFPVHRFIGETQPGMMACKDAAKRLIDLGLV 265

Query: 304 FTPVEDAVRETVESLKAKGFLGQHVSQS 331
           FTPVEDAV++ VESLKAKGFL Q   QS
Sbjct: 266 FTPVEDAVKDAVESLKAKGFLEQGKKQS 293

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357448325|ref|XP_003594438.1| Dihydroflavonol-4-reductase [Medicago truncatula] gi|355483486|gb|AES64689.1| Dihydroflavonol-4-reductase [Medicago truncatula]

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/330 (66%), Positives = 263/330 (79%), Gaps = 4/330 (1%)

Query: 5   AEKEEETVCVTGANGFIGTWLVKTLL--DNNYTSINATVFPGSDSSHLFALPGAGDANLR 62
           +E  EE VCVTGANGFIG+WLV TLL   N +  I+AT+FP SD SHLF L     + + 
Sbjct: 3   SENREEVVCVTGANGFIGSWLVHTLLSKQNPHYKIHATIFPNSDPSHLFTLHPEAQSRIT 62

Query: 63  VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG 122
           +F  ++LDS AVS A+ GC GVFHVASPCTLEDP DP+KEL+ PAVQGTLNVLEA+KR G
Sbjct: 63  IFPVNILDSTAVSNAINGCSGVFHVASPCTLEDPTDPQKELLEPAVQGTLNVLEASKRAG 122

Query: 123 VRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
           V+RVV+TSSISA+VPNP W + K  DE SWTD+EYCK R KWYPVSKT AEK AWEF EK
Sbjct: 123 VKRVVLTSSISAMVPNPNWPENKAIDEGSWTDVEYCKLRGKWYPVSKTEAEKVAWEFCEK 182

Query: 182 H-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL 240
           H GVDVVA+HP TCLGPL+Q  +NAS AVLQ+L+ G KDTQE +WLGAV VKDVA+A VL
Sbjct: 183 HSGVDVVAVHPGTCLGPLLQNQMNASSAVLQRLMMGEKDTQECYWLGAVHVKDVARAHVL 242

Query: 241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDL 300
           ++E+P A+GRYLC NGIYQF  FA+ VS+L+ ++P+H F  ETQPGL P K+AAKRL+DL
Sbjct: 243 VYETPTAAGRYLCVNGIYQFSSFAKIVSELYHDYPIHSFPNETQPGLTPFKEAAKRLIDL 302

Query: 301 GLVFTPVEDAVRETVESLKAKGFLGQHVSQ 330
           GLVFTP++DA+RE  ESL AKGFL +  SQ
Sbjct: 303 GLVFTPIQDAIREAAESLMAKGFLQRTTSQ 332

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555831|ref|XP_003546233.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Glycine max]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/334 (68%), Positives = 273/334 (81%), Gaps = 7/334 (2%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLD--NNYTSINATVFPGSDSSHLFALPGAGD 58
           MA+E    +E VCVTGANGFIG+WLV+TLL+  N   +I+AT+FPGSD+SHLF L  +  
Sbjct: 1   MANEI-PHDEVVCVTGANGFIGSWLVRTLLEKENPRYTIHATIFPGSDASHLFNLHPSAA 59

Query: 59  ANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA 118
           + L +F AD+LD+ A+SRA+  C GVFHVASPCTLEDP DP+++L+ PAVQGTLNVL AA
Sbjct: 60  SRLTLFPADLLDAAALSRAITACSGVFHVASPCTLEDPTDPQRDLLEPAVQGTLNVLTAA 119

Query: 119 KRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE 177
           +R GVRRVV+TSSISA+VPNPGW  G+  DE SWTD+EYCK R KWYPV+KT AE+AAW 
Sbjct: 120 RRVGVRRVVLTSSISAMVPNPGWPAGRAADEASWTDVEYCKGRGKWYPVAKTEAERAAWA 179

Query: 178 FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA 237
           F    GV+VVA+ PATCLGPL+QP LNAS AVL++L+ GS++TQEYHWLGAV VKDVAKA
Sbjct: 180 F---DGVEVVAVLPATCLGPLLQPDLNASSAVLRELMMGSRETQEYHWLGAVHVKDVAKA 236

Query: 238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRL 297
            VLL+E+P A+GRYLCTNGIYQF  FA  VS+L+PEFP+HRF  ETQPGL  CKDAAKRL
Sbjct: 237 NVLLYETPTAAGRYLCTNGIYQFSSFAAMVSELYPEFPIHRFPEETQPGLTACKDAAKRL 296

Query: 298 MDLGLVFTPVEDAVRETVESLKAKGFLGQHVSQS 331
           MDLGLV TP++DAVRE VESL AKGFL    SQS
Sbjct: 297 MDLGLVLTPIQDAVREAVESLIAKGFLQCTPSQS 330

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	331
TAIR|locus:2056171	318	AT2G02400 [Arabidopsis thalian	0.951	0.990	0.722	3.2e-129
TAIR|locus:2171258	324	AT5G58490 [Arabidopsis thalian	0.951	0.972	0.510	1.3e-82
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.954	0.972	0.417	3.8e-62
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.939	0.953	0.436	4.8e-62
TAIR|locus:2200427	344	CCR1 "cinnamoyl coa reductase	0.948	0.912	0.432	1e-59
TAIR|locus:2033394	319	AT1G66800 [Arabidopsis thalian	0.936	0.971	0.413	7.3e-59
TAIR|locus:2051018	321	CRL2 "CCR(Cinnamoyl coA:NADP o	0.912	0.940	0.427	1.9e-58
TAIR|locus:2025832	332	CCR2 "cinnamoyl coa reductase"	0.924	0.921	0.419	8.4e-58
TAIR|locus:2012315	322	AT1G09510 [Arabidopsis thalian	0.915	0.940	0.423	3.6e-57
TAIR|locus:2051008	321	CRL1 "CCR(Cinnamoyl coA:NADP o	0.927	0.956	0.415	4.6e-57

TAIR|locus:2056171 AT2G02400 [Arabidopsis thaliana (taxid:3702)]

 Score = 1268 (451.4 bits), Expect = 3.2e-129, P = 3.2e-129
 Identities = 229/317 (72%), Positives = 279/317 (88%)

Query:     9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
             +ETVCVTGANGFIG+W+++TL++  YT I+A+++PGSD +HL  LPG+ D+ +++FEAD+
Sbjct:     3 KETVCVTGANGFIGSWIIRTLIEKGYTKIHASIYPGSDPTHLLQLPGS-DSKIKIFEADL 61

Query:    69 LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
             LDS A+SRA++GC GVFHVASPCTL+ PVDPEKEL+ PAV+GT+NVLEAAKRF VRRVV+
Sbjct:    62 LDSDAISRAIDGCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVI 121

Query:   129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
             TSSISA+VPNP W  KV  DE+SW+DL++CKSR+KWYP+SKTLAEKAAWEF+EKHG ++V
Sbjct:   122 TSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTNIV 181

Query:   188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
              IHP+TCLGPL+QP LNASCAVL QLLQGS +TQE+HWLG V VKDVAK  V+LFE+P A
Sbjct:   182 TIHPSTCLGPLLQPNLNASCAVLLQLLQGSTETQEHHWLGVVHVKDVAKGHVMLFETPDA 241

Query:   248 SGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPV 307
             SGR+LCTNGIYQF +FA  VSKLFPEF VH+FD ETQPGL  C DAAKRL++LGLVFT V
Sbjct:   242 SGRFLCTNGIYQFSEFAALVSKLFPEFAVHKFDKETQPGLTSCNDAAKRLIELGLVFTAV 301

Query:   308 EDAVRETVESLKAKGFL 324
             EDAV+ETV+SL+ KGFL
Sbjct:   302 EDAVKETVQSLRDKGFL 318

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

TAIR|locus:2171258 AT5G58490 [Arabidopsis thaliana (taxid:3702)]

 Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
 Identities = 164/321 (51%), Positives = 224/321 (69%)

Query:     8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVF 64
             E E VCVTGA+G IG+WLV  LL   Y S++ATV    D   + HL  L GA    L +F
Sbjct:     5 EREVVCVTGASGCIGSWLVHQLLLRGY-SVHATVKNLQDEKETKHLEGLEGAA-TRLHLF 62

Query:    65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
             E D+L    VS A+ GC GVFH+ASPC +++  DP+K+L+ PAV+GT+NVL AAK   V+
Sbjct:    63 EMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAKEASVK 122

Query:   125 RVVVTSSISAIVPNPGWKG-KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
             RVVVTSSISAI P+P W   K+ +E  W   +YC+    WYP+SKTLAEKAAWEFAE+ G
Sbjct:   123 RVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAWEFAEEKG 182

Query:   184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
             +DVV ++P T +GP++ P LNAS  +L +LLQG  +T E  ++G+V  KDVA A +L++E
Sbjct:   183 LDVVVVNPGTVMGPVIPPSLNASMHMLLRLLQGCTETYENFFMGSVHFKDVALAHILVYE 242

Query:   244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLV 303
              P + GR+LC   I  +GDF  +V++L+P + V +   ETQPGL+  K+A+K+L+DLGL 
Sbjct:   243 DPYSKGRHLCVEAISHYGDFVAKVAELYPNYNVPKLPRETQPGLLRDKNASKKLIDLGLK 302

Query:   304 FTPVEDAVRETVESLKAKGFL 324
             F  +E+ ++E VESLK+KGF+
Sbjct:   303 FISMEEIIKEGVESLKSKGFI 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 136/326 (41%), Positives = 210/326 (64%)

Query:     5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANL 61
             + +EE+TVCVTGA+G+I +W+VK LL   YT + A+V   +D   + HL AL GA +  L
Sbjct:     2 SSEEEKTVCVTGASGYIASWIVKLLLLRGYT-VKASVRDPNDPRKTEHLLALEGA-EERL 59

Query:    62 RVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA-KR 120
             ++F+A++L+ G+   A++GC+GVFH ASP    D  DP+ EL+ PAV+GT+NVL +  K 
Sbjct:    60 KLFKANLLEEGSFDSAIDGCEGVFHTASPF-YHDVKDPQAELLDPAVKGTINVLSSCLKT 118

Query:   121 FGVRRVVVTSSISAIVPN--PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
               V+RVV+TSSI+A+  N  P     + DET + D +YC++ K WY +SKTLAE AAW+F
Sbjct:   119 SSVKRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRASKLWYVLSKTLAENAAWKF 178

Query:   179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQ 238
             A+++ + +V+I+PA  +GPL+QP LN S A +  L++G++ T      G V VKDVA A 
Sbjct:   179 AKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKGAQ-TFPNATFGWVNVKDVANAH 237

Query:   239 VLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLM 298
             +  FE+P A GRY     +  + +    +  L+P+F +     + +  +   K + ++  
Sbjct:   238 IQAFENPDADGRYCLVERVAHYSEVVNILHDLYPDFQLPEKCADEKIYIPTYKVSKEKAE 297

Query:   299 DLGLVFTPVEDAVRETVESLKAKGFL 324
              LG+ F P+E +++ETVESL+ KGF+
Sbjct:   298 SLGVEFVPLEVSIKETVESLRDKGFI 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 141/323 (43%), Positives = 201/323 (62%)

Query:     8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVF 64
             E + VCVTGA+G+I +WLVK LL   YT + A+V   SD   + HL +L GA +  L +F
Sbjct:     6 EGKVVCVTGASGYIASWLVKFLLSRGYT-VKASVRDPSDPKKTQHLVSLEGAKE-RLHLF 63

Query:    65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
             +AD+L+ G+   A++GC GVFH ASP    D  DP+ ELI PAV+GTLNVL + AK   V
Sbjct:    64 KADLLEQGSFDSAIDGCHGVFHTASPF-FNDAKDPQAELIDPAVKGTLNVLNSCAKASSV 122

Query:   124 RRVVVTSSISAIVPN--PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
             +RVVVTSS++A+  N  P       DET ++D E C++ K WY +SKTLAE AAW+ A++
Sbjct:   123 KRVVVTSSMAAVGYNGKPRTPDVTVDETWFSDPELCEASKMWYVLSKTLAEDAAWKLAKE 182

Query:   182 HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL 241
              G+D+V I+PA  +GPL+QP LN S A +  L+ G+K      + G V VKDVA A +  
Sbjct:   183 KGLDIVTINPAMVIGPLLQPTLNTSAAAILNLINGAKTFPNLSF-GWVNVKDVANAHIQA 241

Query:   242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAK-RLMDL 300
             FE P+A+GRY     +    +    + +L+P  P+     +  P  +P    +K +   L
Sbjct:   242 FEVPSANGRYCLVERVVHHSEIVNILRELYPNLPLPERCVDENP-YVPTYQVSKDKTRSL 300

Query:   301 GLVFTPVEDAVRETVESLKAKGF 323
             G+ + P++ +++ETVESLK KGF
Sbjct:   301 GIDYIPLKVSIKETVESLKEKGF 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 142/328 (43%), Positives = 201/328 (61%)

Query:     1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGD 58
             +AS A K   TVCVTGA G+I +W+VK LL+  YT +  TV    D  ++HL  L G G 
Sbjct:     5 VASPAGK---TVCVTGAGGYIASWIVKILLERGYT-VKGTVRNPDDPKNTHLRELEG-GK 59

Query:    59 ANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA 118
               L + +AD+ D  A+  A++GC GVFH ASP T  D  DPE +++ PAV G   V+ AA
Sbjct:    60 ERLILCKADLQDYEALKAAIDGCDGVFHTASPVT--D--DPE-QMVEPAVNGAKFVINAA 114

Query:   119 KRFGVRRVVVTSSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE 177
                 V+RVV+TSSI A+  +P    + V DE+ W+DL++CK+ K WY   K +AE+AAWE
Sbjct:   115 AEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWE 174

Query:   178 FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA 237
              A++ GVD+V ++P   LGP +QP +NAS   + + L GS  T        V V+DVA A
Sbjct:   175 TAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALA 234

Query:   238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH-RFDGETQPGLIPCKDAAKR 296
              VL++E+P+ASGRYL        G+  E ++KLFPE+P+  +   E  P   P K   ++
Sbjct:   235 HVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQK 294

Query:   297 LMDLGLVFTPVEDAVRETVESLKAKGFL 324
             + DLGL FT  + ++ +TV+SL+ KG L
Sbjct:   295 IKDLGLEFTSTKQSLYDTVKSLQEKGHL 322

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IDA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2033394 AT1G66800 [Arabidopsis thaliana (taxid:3702)]

 Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 133/322 (41%), Positives = 200/322 (62%)

Query:     8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVF 64
             E + VCVTGA+G+I +W+VK LL   YT + ATV    D+   +HL  L GA +  L++F
Sbjct:     4 EGKVVCVTGASGYIASWIVKLLLLRGYT-VRATVRNPMDTKKTNHLLTLEGASE-RLKLF 61

Query:    65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
             ++D+L+ G+  +A+EGC GVFH ASP +L    DP+ E+I PAV GTLNVL   AK   V
Sbjct:    62 KSDLLEEGSFDQAIEGCDGVFHTASPVSLT-VTDPQTEMIDPAVNGTLNVLRTCAKVSSV 120

Query:   124 RRVVVTSSISAIVP-NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
             +RV+VTSS +A +  NP     V DET +TDL    + K WY  SKTLAE+ AW FA+++
Sbjct:   121 KRVIVTSSTAATLSINPN---DVVDETVFTDLSVYLAMKAWYGYSKTLAEETAWRFAKEN 177

Query:   183 GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF 242
             G+D+V ++P   +GP++QP LN S  V+  L+ G   +  +++   + V+DV+ A +  F
Sbjct:   178 GIDLVVMNPGNVIGPVLQPTLNYSVEVIVDLINGKNPSNSFYYR-FMDVRDVSLAHIKAF 236

Query:   243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGL 302
             E P+ASGRY+  +      D  + + +LFP+      D E + G +  K    +L  LG+
Sbjct:   237 EVPSASGRYILADPDVTMKDIQKLLHELFPDLCRVDKDNENEVGEMAYKVCVDKLKSLGI 296

Query:   303 VFTPVEDAVRETVESLKAKGFL 324
              FTP+++++++TV SLK +  L
Sbjct:   297 EFTPIKESLKDTVVSLKERCLL 318

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2051018 CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
 Identities = 136/318 (42%), Positives = 204/318 (64%)

Query:    12 VCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDS-SHLFALPGAGDANLRVFEADVL 69
             VCVTGA GF+G+W+V  LL  +Y  ++ TV  PG++  +HL  L  AGD  L++F+AD+L
Sbjct:     9 VCVTGAGGFLGSWVVNHLLSRDYF-VHGTVRDPGNEKYAHLKKLDKAGD-KLKLFKADLL 66

Query:    70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             + G++  A+ GC GVFHVA P       +PE +LI PAV GTLNVL+A     V+RVV  
Sbjct:    67 NYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACVEAKVKRVVYV 126

Query:   130 SSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
             SS+SA+  NP W K +V DET+W+D +YCK  + WY +SKT AE  A+EFA++ G+D+V+
Sbjct:   127 SSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAFEFAKRTGLDLVS 186

Query:   189 IHPATCLGPLMQPY-LNASCAVLQQLL-QG--SKDTQEYHWLGAVPVKDVAKAQVLLFES 244
             + P   LGP++Q + +NAS  VL +LL +G  S++ QE H    V V+DVA+A +L++E 
Sbjct:   187 VCPTLVLGPVLQQHTVNASSLVLLKLLKEGYESRNNQERH---LVDVRDVAQALLLVYEK 243

Query:   245 PAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVF 304
               A GRY+C     +  + AE++  L+  +   +   E   G +  K ++++L  LG  +
Sbjct:   244 AEAEGRYICIGHTVREQEVAEKLKSLYLNYNYPKRYIEAD-GKV--KVSSEKLQKLGWTY 300

Query:   305 TPVEDAVRETVESL-KAK 321
              P+E+ + ++VES  KAK
Sbjct:   301 RPLEETLVDSVESYRKAK 318

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2025832 CCR2 "cinnamoyl coa reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 133/317 (41%), Positives = 192/317 (60%)

Query:    12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVL 69
             VCVTGA G+I +W+VK LL+  YT +  TV   +D  ++HL  L GA +  L +  AD+L
Sbjct:     8 VCVTGAGGYIASWIVKLLLERGYT-VRGTVRNPTDPKNNHLRELQGAKE-RLTLHSADLL 65

Query:    70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             D  A+   ++GC GVFH ASP T  D  DPE  ++ PAV G   V++AA +  V+RVV T
Sbjct:    66 DYEALCATIDGCDGVFHTASPMT--D--DPET-MLEPAVNGAKFVIDAAAKAKVKRVVFT 120

Query:   130 SSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
             SSI A+  NP    + + DE  W+DL++CK+ K WY   K LAE++AWE A+  GVD+V 
Sbjct:   121 SSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDLVV 180

Query:   189 IHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
             ++P   LGP +Q  +NAS   + + L GS  T        V V+DVA   VL++E+P+AS
Sbjct:   181 LNPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYEAPSAS 240

Query:   249 GRYLCTNGIYQFGDFAERVSKLFPEFPVH-RFDGETQPGLIPCKDAAKRLMDLGLVFTPV 307
             GRY+        G+  E ++K FPE+P+  +   E  P   P K   +++ DLGL F P+
Sbjct:   241 GRYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGLEFKPI 300

Query:   308 EDAVRETVESLKAKGFL 324
             + ++ E+V+SL+ KG L
Sbjct:   301 KQSLYESVKSLQEKGHL 317

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=NAS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0042754 "negative regulation of circadian rhythm" evidence=IMP

TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)]

 Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
 Identities = 135/319 (42%), Positives = 198/319 (62%)

Query:    12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
             VCVTGA+G++ +W+VK LL   YT + ATV   SD   + HL AL GA +  L++F+AD+
Sbjct:     8 VCVTGASGYVASWIVKLLLLRGYT-VRATVRDPSDEKKTEHLLALDGAKE-KLKLFKADL 65

Query:    69 LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGVRRVV 127
             L+ G+  +A+EGC  VFH ASP +L    DP+ ELI PAV+GTLNVL+  AK   V+RV+
Sbjct:    66 LEEGSFEQAIEGCDAVFHTASPVSLT-VTDPQIELIDPAVKGTLNVLKTCAKVSSVKRVI 124

Query:   128 VTSSISAIV---PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
             VTSS++A++   P  G    + DE+ ++D  +C  +K WY +SKTLAE  AW FA++ G+
Sbjct:   125 VTSSMAAVLFREPTLG-PNDLVDESCFSDPNFCTEKKLWYALSKTLAEDEAWRFAKEKGL 183

Query:   185 DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES 244
             D+V I+P   LGPL++P L  S  V+ +L+ G KD         V V+DVA A +  FE+
Sbjct:   184 DLVVINPGLVLGPLLKPSLTFSVNVIVELITG-KDNFINKDFRLVDVRDVALAHIKAFET 242

Query:   245 PAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPC--KDAAKRLMDLGL 302
             P+A+GRY+    +    D  + + + FP+  +    GE    +IP   K   +++  LG+
Sbjct:   243 PSANGRYIIEGPVVTINDIEKILREFFPDLNLGN-KGEASE-IIPVIYKLCVEKVKSLGI 300

Query:   303 VFTPVEDAVRETVESLKAK 321
              FTP E  +R+T+ SLK K
Sbjct:   301 EFTPTEATLRDTILSLKEK 319

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2051008 CRL1 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 136/327 (41%), Positives = 201/327 (61%)

Query:     5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDS-SHLFALPGAGDANLR 62
             A+  +  VCVTGA GF+G+W+V  LL  +Y  ++ TV  P ++  +HL  L  AGD  L+
Sbjct:     2 ADVHKGKVCVTGAGGFLGSWVVDLLLSKDYF-VHGTVRDPDNEKYAHLKKLEKAGD-KLK 59

Query:    63 VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG 122
             +F+AD+LD G++  A+ GC GVFHVA P       +PE ELI PAV GTLNVL+A     
Sbjct:    60 LFKADLLDYGSLQSAIAGCSGVFHVACPVPPASVPNPEVELIAPAVDGTLNVLKACIEAN 119

Query:   123 VRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
             V+RVV  SS++A   NP W K +V DE  W+D EYCK  + WY ++KT AE  A+EFA++
Sbjct:   120 VKRVVYVSSVAAAFMNPMWSKNQVLDEACWSDQEYCKKTENWYCLAKTRAESEAFEFAKR 179

Query:   182 HGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLL-QG--SKDTQEYHWLGAVPVKDVAKA 237
              G+ +V++ P   LGP++Q   +NAS  VL +LL +G  ++D QE H    V V+DVA+A
Sbjct:   180 TGLHLVSVCPTLVLGPILQQNTVNASSLVLLKLLKEGFETRDNQERH---LVDVRDVAQA 236

Query:   238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEF--PVHRFDGETQPGLIPCKDAAK 295
              +L++E   A GRY+CT+   +     E++   +P +  P    D E +      K +++
Sbjct:   237 LLLVYEKAEAEGRYICTSHTVKEEIVVEKLKSFYPHYNYPKKYIDAEDR-----VKVSSE 291

Query:   296 RLMDLGLVFTPVEDAVRETVESL-KAK 321
             +L  LG  + P+E+ + ++VES  KAK
Sbjct:   292 KLQKLGWTYRPLEETLVDSVESYRKAK 318

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0046686 "response to cadmium ion" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	331
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-136
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	2e-95
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	7e-76
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	4e-73
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	2e-72
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	4e-71
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	3e-69
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	6e-59
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	7e-59
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	1e-57
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	2e-46
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	1e-40
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-39
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	5e-33
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	7e-31
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	4e-29
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	8e-24
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	8e-21
cd08946	200	cd08946, SDR_e, extended (e) SDRs	5e-20
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	7e-20
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	7e-18
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	9e-18
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	3e-17
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	7e-17
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	5e-16
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	8e-14
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	3e-12
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	5e-12
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	1e-11
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	2e-11
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	4e-11
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	4e-11
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	1e-10
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	2e-09
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	2e-09
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	2e-08
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	6e-08
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	6e-08
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	1e-07
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	2e-07
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	2e-07
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	3e-07
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	3e-07
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	5e-07
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	5e-07
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	7e-07
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	9e-07
pfam08659	181	pfam08659, KR, KR domain	1e-06
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	2e-06
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	2e-06
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-06
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	3e-06
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	5e-06
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	9e-06
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	1e-05
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	2e-05
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-05
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	2e-05
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	3e-05
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	4e-05
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	4e-05
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	4e-05
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	5e-05
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	6e-05
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-04
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	2e-04
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	2e-04
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	2e-04
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-04
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-04
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	3e-04
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	4e-04
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	5e-04
PRK05865	854	PRK05865, PRK05865, hypothetical protein; Provisio	6e-04
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	8e-04
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	9e-04
cd05233	234	cd05233, SDR_c, classical (c) SDRs	0.001
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	0.001
PLN02206	442	PLN02206, PLN02206, UDP-glucuronate decarboxylase	0.001
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	0.002
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	0.002
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	0.002
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	0.002
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	0.003
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	0.004

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  388 bits (998), Expect = e-136
 Identities = 143/296 (48%), Positives = 203/296 (68%), Gaps = 8/296 (2%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVFEADV 68
           VCVTGA+GFIG+WLVK LL   YT + ATV    D    +HL  L GA +  L++F+AD+
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYT-VRATVRDPGDEKKVAHLLELEGAKE-RLKLFKADL 58

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVV 127
           LD G+   A++GC GVFHVASP    D  DPE+E+I PAV+GTLNVLEA  +   V+RVV
Sbjct: 59  LDYGSFDAAIDGCDGVFHVASPVDF-DSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVV 117

Query: 128 VTSSISAIVPNPGWK-GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
            TSS++A+V NP    GKV DE+ W+DL++CK  K WY +SKTLAEKAAWEFAE++G+D+
Sbjct: 118 FTSSVAAVVWNPNRGEGKVVDESCWSDLDFCKKTKLWYALSKTLAEKAAWEFAEENGLDL 177

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
           V ++P+  +GP +QP LN+S  ++  LL+G+ +  +   L  V V DVA A +LL+E P+
Sbjct: 178 VTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQNGSLALVHVDDVADAHILLYEKPS 237

Query: 247 ASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGL 302
           ASGRY+C++ +    + A  ++K +P++ +     + QPG+   K ++K+L DLG 
Sbjct: 238 ASGRYICSSHVVTRPELAALLAKKYPQYNIPTKFEDDQPGVARVKLSSKKLKDLGF 293

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  285 bits (731), Expect = 2e-95
 Identities = 141/325 (43%), Positives = 205/325 (63%), Gaps = 12/325 (3%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVF 64
           E + VCVTGA+G+I +WLVK LL   YT + ATV   +D   + HL AL GA +  L +F
Sbjct: 3   EGKVVCVTGASGYIASWLVKLLLQRGYT-VKATVRDPNDPKKTEHLLALDGAKE-RLHLF 60

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
           +A++L+ G+    V+GC+GVFH ASP    D  DP+ ELI PAV+GTLNVL + AK   V
Sbjct: 61  KANLLEEGSFDSVVDGCEGVFHTASP-FYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSV 119

Query: 124 RRVVVTSSISAIVPN--PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
           +RVVVTSS++A+  N  P     V DET ++D  +C+  K WY +SKTLAE+AAW+FA++
Sbjct: 120 KRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE 179

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL 241
           +G+D+V I+PA  +GPL+QP LN S   +  L+ G++ T        V V+DVA A +  
Sbjct: 180 NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQA 238

Query: 242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAK-RLMDL 300
           FE P+ASGRY     +  + +  + + +L+P   +     + +P  +P    +K +   L
Sbjct: 239 FEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLPEKCADDKP-YVPTYQVSKEKAKSL 297

Query: 301 GLVFTPVEDAVRETVESLKAKGFLG 325
           G+ F P+E ++++TVESLK KGFL 
Sbjct: 298 GIEFIPLEVSLKDTVESLKEKGFLS 322

Length = 322

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  235 bits (601), Expect = 7e-76
 Identities = 128/321 (39%), Positives = 197/321 (61%), Gaps = 10/321 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEA 66
           + VCVTGA+G+I +W+VK LL   YT + ATV   +D   + HL AL GA +  L++F+A
Sbjct: 6   KLVCVTGASGYIASWIVKLLLLRGYT-VKATVRDLTDRKKTEHLLALDGAKE-RLKLFKA 63

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRR 125
           D+L+  +  +A+EGC  VFH ASP       DP+ ELI PA++GT+NVL   K    V+R
Sbjct: 64  DLLEESSFEQAIEGCDAVFHTASP-VFFTVKDPQTELIDPALKGTINVLNTCKETPSVKR 122

Query: 126 VVVTSSISAIVPN--PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           V++TSS +A++    P     V DET ++D   C+  K WYP+SK LAE AAWEFA+ +G
Sbjct: 123 VILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNG 182

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +D+V ++P    GPL+QP LN S  ++   + G K+     +   V V+DVA A +   E
Sbjct: 183 IDMVVLNPGFICGPLLQPTLNFSVELIVDFING-KNLFNNRFYRFVDVRDVALAHIKALE 241

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLV 303
           +P+A+GRY+    I    D  + + +LFP+  +   + E++   + CK   +++ +LG+ 
Sbjct: 242 TPSANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEMNEMICKVCVEKVKNLGVE 301

Query: 304 FTPVEDAVRETVESLKAKGFL 324
           FTP++ ++R+T+ SLK K  L
Sbjct: 302 FTPMKSSLRDTILSLKEKCLL 322

Length = 322

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  227 bits (581), Expect = 4e-73
 Identities = 111/277 (40%), Positives = 149/277 (53%), Gaps = 17/277 (6%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVFEAD 67
            V VTGA GFI + +V+ LL   Y  +  TV   S S+    L    G  D  L     D
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGY-KVRGTVRSLSKSAKLKALLKAAGYND-RLEFVIVD 58

Query: 68  -VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRR 125
            +    A   A++G   V HVASP     P D E ++I PAV+GTLNVLEAAK  G V+R
Sbjct: 59  DLTAPNAWDEALKGVDYVIHVASPFPFTGP-DAEDDVIDPAVEGTLNVLEAAKAAGSVKR 117

Query: 126 VVVTSSISAIV-PNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAE--K 181
           VV+TSS++A+  P     GKVF E  W DL   KS     Y  SKTLAEKAAWEF +  K
Sbjct: 118 VVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKENK 177

Query: 182 HGVDVVAIHPATCLGPLMQP-YLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDVAKAQ 238
              +++ I+P   LGP +    LN+S  ++ +LL G          + G V V+DVA A 
Sbjct: 178 PKFELITINPGYVLGPSLLADELNSSNELINKLLDGKLPAIPPNLPF-GYVDVRDVADAH 236

Query: 239 VLLFESPAASG-RYLCTNGIYQFGDFAERVSKLFPEF 274
           V   ESP A+G R++ + G + F + A+ + + FP+ 
Sbjct: 237 VRALESPEAAGQRFIVSAGPFSFQEIADLLREEFPQL 273

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  227 bits (580), Expect = 2e-72
 Identities = 136/319 (42%), Positives = 197/319 (61%), Gaps = 11/319 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEAD 67
           +TVCVTGA G+I +W+VK LL+  YT +  TV    D  ++HL  L G G   L + +AD
Sbjct: 11  KTVCVTGAGGYIASWIVKILLERGYT-VKGTVRNPDDPKNTHLRELEG-GKERLILCKAD 68

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + D  A+  A++GC GVFH ASP T +DP    ++++ PAV G   V+ AA    V+RVV
Sbjct: 69  LQDYEALKAAIDGCDGVFHTASPVT-DDP----EQMVEPAVNGAKFVINAAAEAKVKRVV 123

Query: 128 VTSSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           +TSSI A+  +P    + V DE+ W+DL++CK+ K WY   K +AE+AAWE A++ GVD+
Sbjct: 124 ITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDL 183

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
           V ++P   LGP +QP +NAS   + + L GS  T        V V+DVA A VL++E+P+
Sbjct: 184 VVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS 243

Query: 247 ASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAAKRLMDLGLVFT 305
           ASGRYL        G+  E ++KLFPE+P+  +   E  P   P K   +++ DLGL FT
Sbjct: 244 ASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT 303

Query: 306 PVEDAVRETVESLKAKGFL 324
             + ++ +TV+SL+ KG L
Sbjct: 304 STKQSLYDTVKSLQEKGHL 322

Length = 342

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  223 bits (569), Expect = 4e-71
 Identities = 128/320 (40%), Positives = 194/320 (60%), Gaps = 11/320 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEA 66
           + VCVTGA+G+I +W+VK LL   Y +INATV    D   + HL AL GA +  L++F+A
Sbjct: 6   KVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDRKKTDHLLALDGAKE-RLKLFKA 63

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRR 125
           D+LD G+   A++GC+ VFH ASP  +    DP+ ELI PAV GT+NVL    +   V+R
Sbjct: 64  DLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKR 123

Query: 126 VVVTSSISAIVPNPGWKG--KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           V++TSS++A++      G   V DET +T+  + + RK+WY +SKTLAE AAW FA+ + 
Sbjct: 124 VILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNE 183

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +D++ ++P    GP++QP LN S AV+ +L++G       H    V V+DVA A V   E
Sbjct: 184 IDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHR-FVDVRDVALAHVKALE 242

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAAKRLMDLGL 302
           +P+A+GRY+    +    D    + + FP+  +  R +  T+   +       ++  LG+
Sbjct: 243 TPSANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKSLGI 302

Query: 303 V-FTPVEDAVRETVESLKAK 321
           + FTP E ++R+TV SLK K
Sbjct: 303 IEFTPTETSLRDTVLSLKEK 322

Length = 325

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  219 bits (560), Expect = 3e-69
 Identities = 127/331 (38%), Positives = 190/331 (57%), Gaps = 23/331 (6%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGS--DSSHLFALPGAGDANLRVF 64
           ++ETVCVTGA+GFIG+WLV  LL+  YT + ATV  P +     HL  LPGA    L ++
Sbjct: 4   QKETVCVTGASGFIGSWLVMRLLERGYT-VRATVRDPANVKKVKHLLDLPGA-TTRLTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-V 123
           +AD+   G+   A+ GC GVFHVA+P   E   DPE E+I P V G L++++A  +   V
Sbjct: 62  KADLAVEGSFDDAIRGCTGVFHVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTV 120

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
           RR+V TSS +  V     +  V+DE  W+DL++C+ +K   W Y VSKTLAEKAAW++A 
Sbjct: 121 RRIVFTSS-AGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAA 179

Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW-----LGAVPVKDVA 235
           ++G+D ++I P   +GP +   +  S      L+ G+    E H+        V + D+ 
Sbjct: 180 ENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN----EAHYSIIKQGQFVHLDDLC 235

Query: 236 KAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAA 294
            A + LFE PAA GRY+C++      D A+ + + +PE+ +  RF G     L   + ++
Sbjct: 236 NAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPG-IDEDLKSVEFSS 294

Query: 295 KRLMDLGLVFT-PVEDAVRETVESLKAKGFL 324
           K+L DLG  F   +ED     +E+ + KG +
Sbjct: 295 KKLTDLGFTFKYSLEDMFDGAIETCREKGLI 325

Length = 351

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  191 bits (486), Expect = 6e-59
 Identities = 102/301 (33%), Positives = 152/301 (50%), Gaps = 27/301 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
           V VTGA+GF+ + +V+ LL+  Y  + ATV   S     +HL  L  A    L +  AD+
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYK-VRATVRDPSKVKKVNHLLDLD-AKPGRLELAVADL 58

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVV 127
            D  +    ++GC GVFHVA+P +     DP  E+I PA+ GTLN L+AA     V+R V
Sbjct: 59  TDEQSFDEVIKGCAGVFHVATPVSFSSK-DPN-EVIKPAIGGTLNALKAAAAAKSVKRFV 116

Query: 128 VTSSISAI-VPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEKHG 183
           +TSS  ++ +P P  +G V DE SW   E+    KK  W Y  SKTLAEKAAW+FA+++ 
Sbjct: 117 LTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADENN 176

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK---------DTQEYHWLGAVPVKDV 234
           +D++ + P   +G +      +S      L+ G++             Y     V V D+
Sbjct: 177 IDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGYY-----VHVVDI 231

Query: 235 AKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAA 294
             A +   E P A GRY+CT G + +    + + K +P +     D   Q   +    +A
Sbjct: 232 CLAHIGCLELPIARGRYICTAGNFDWNTLLKTLRKKYPSYTF-PTDFPDQGQDLSKFSSA 290

Query: 295 K 295
           K
Sbjct: 291 K 291

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  192 bits (489), Expect = 7e-59
 Identities = 121/347 (34%), Positives = 186/347 (53%), Gaps = 34/347 (9%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           MA+     ++T CV G  GF+ + L+K LL   Y ++N TV    +    +HL AL   G
Sbjct: 1   MATLTPTGKKTACVIGGTGFLASLLIKLLLQKGY-AVNTTVRDPENQKKIAHLRALQELG 59

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
           D  L++F AD+ D  +    + GC  VFHVA+P       DPE ++I PA+QG  NVL+A
Sbjct: 60  D--LKIFGADLTDEESFEAPIAGCDLVFHVATPVNFASE-DPENDMIKPAIQGVHNVLKA 116

Query: 118 -AKRFGVRRVVVTSSISAI-VPNPGWKGKVFDETSWTDLEYCKSRK--KW-YPVSKTLAE 172
            AK   V+RV++TSS +A+ +      G V +E +WTD+E+  S K   W YP SKTLAE
Sbjct: 117 CAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAE 176

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA---- 228
           KAAW+FAE++ +D++ + P    GP +   + +S ++   L+ G     E+   G     
Sbjct: 177 KAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITG----NEFLINGLKGMQ 232

Query: 229 --------VPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEF--PVHR 278
                     V+DV +A + L E  +ASGRY+C        + A+ + K +P++  P   
Sbjct: 233 MLSGSISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDF 292

Query: 279 FDGETQPGLIPCKDAAKRLMDLGLVFT-PVEDAVRETVESLKAKGFL 324
            D  ++  LI    ++++L+  G  F   +E+   +TVE  KAKG L
Sbjct: 293 GDFPSKAKLII---SSEKLISEGFSFEYGIEEIYDQTVEYFKAKGLL 336

Length = 338

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  189 bits (482), Expect = 1e-57
 Identities = 122/350 (34%), Positives = 189/350 (54%), Gaps = 32/350 (9%)

Query: 3   SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLR 62
              E    T CVTGA G+IG+WLVK LL   YT ++AT+   + S HL +    GD  LR
Sbjct: 4   EGRESATGTYCVTGATGYIGSWLVKLLLQRGYT-VHATLRDPAKSLHLLSKWKEGD-RLR 61

Query: 63  VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPE-------KELILPAVQGTLNVL 115
           +F AD+ + G+   AV+GC GVFHVA+    +   D          ++I PA++GTLNVL
Sbjct: 62  LFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVL 121

Query: 116 EAAKRFG-VRRVVVTSSISAIVP---NPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSK 168
           ++  +   V+RVV TSSIS +     N  W+  V DET  T +++  + K   W Y +SK
Sbjct: 122 KSCLKSKTVKRVVFTSSISTLTAKDSNGRWR-AVVDETCQTPIDHVWNTKASGWVYVLSK 180

Query: 169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA 228
            L E+AA+++A+++G+D+V++   T  GP + P + +S  VL   + G  D++ +  L A
Sbjct: 181 LLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITG--DSKLFSILSA 238

Query: 229 VP----------VKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEF-PVH 277
           V           ++D+  A + L E   A GRY+C    Y   +    +SK +P      
Sbjct: 239 VNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQV 298

Query: 278 RFDGETQPGLIPCKDAAKRLMDLGLVFT-PVEDAVRETVESLKAKGFLGQ 326
           R D E + G IP + ++K+L DLG  +   +E+ + +T++     GFL Q
Sbjct: 299 RLDEEKR-GSIPSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDHGFLPQ 347

Length = 353

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score =  158 bits (402), Expect = 2e-46
 Identities = 89/267 (33%), Positives = 138/267 (51%), Gaps = 36/267 (13%)

Query: 6   EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDAN--LRV 63
           ++  ++VCV  A+G++G WLVK LL   YT ++A V    ++     + G       L+V
Sbjct: 3   DESSKSVCVMDASGYVGFWLVKRLLSRGYT-VHAAVQKNGETEIEKEIRGLSCEEERLKV 61

Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVD--PEKELILPA-VQGTLNVLEA-AK 119
           F+ D LD  ++  A++GC G+F     C  + P D     E ++   V+   NVLEA A+
Sbjct: 62  FDVDPLDYHSILDALKGCSGLF-----CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQ 116

Query: 120 RFGVRRVVVTSSISAIVPNPGWKG------KVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
              + +VV TSS++A++    W+       K  DE SW+D  +C+  K W+ ++KTL+EK
Sbjct: 117 TDTIEKVVFTSSLTAVI----WRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEK 172

Query: 174 AAWEFAEKHGVDVVAIHPATCLGP-LMQ--PYLNASCAVLQQLLQGSKDTQEYHWLGAVP 230
            AW  A   GV++V+I+    +GP L Q  PY           L+G+    E   L  V 
Sbjct: 173 TAWALAMDRGVNMVSINAGLLMGPSLTQHNPY-----------LKGAAQMYENGVLVTVD 221

Query: 231 VKDVAKAQVLLFESPAASGRYLCTNGI 257
           V  +  A +  FE  ++ GRYLC N I
Sbjct: 222 VNFLVDAHIRAFEDVSSYGRYLCFNHI 248

Length = 297

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  143 bits (364), Expect = 1e-40
 Identities = 101/341 (29%), Positives = 147/341 (43%), Gaps = 61/341 (17%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           VTGA GF+G+ LV+ LL   Y  + A V  GSD+  L  LP      + V E D+ D+ +
Sbjct: 3   VTGATGFLGSNLVRALLAQGYR-VRALVRSGSDAVLLDGLP------VEVVEGDLTDAAS 55

Query: 74  VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS 133
           ++ A++GC  VFH+A+  +L    D  KEL    V+GT NVL+AA   GVRRVV TSSI+
Sbjct: 56  LAAAMKGCDRVFHLAAFTSLWAK-DR-KELYRTNVEGTRNVLDAALEAGVRRVVHTSSIA 113

Query: 134 AIVPNPGWKGKVFDETS-WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPA 192
           A+   P       DET+ W +  +       Y  SK LAE    E A + G+DVV ++P+
Sbjct: 114 ALGGPP---DGRIDETTPWNERPFPND----YYRSKLLAELEVLEAAAE-GLDVVIVNPS 165

Query: 193 TCLGPLMQPYLNAS-----CAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
              GP        S        L   L              V V+DVA+  +   E    
Sbjct: 166 AVFGPG--DEGPTSTGLDVLDYLNGKLPAYPPG----GTSFVDVRDVAEGHIAAMEKGRR 219

Query: 248 SGRYLCTNGIYQFGDFAERVSKLFP-------------------EFPVHRFDGETQPGLI 288
             RY+       F    E ++++                          R  G  +P L+
Sbjct: 220 GERYILGGENLSFKQLFETLAEITGVKPPRRTIPPWLLKAVAALSELKARLTG--KPPLL 277

Query: 289 PCK-----------DAAKRLMDLGLVFTPVEDAVRETVESL 318
             +            + K   +LG    P+E+A+R+T+  L
Sbjct: 278 TPRTARVLRRNYLYSSDKARRELGYSPRPLEEALRDTLAWL 318

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  141 bits (356), Expect = 2e-39
 Identities = 82/324 (25%), Positives = 122/324 (37%), Gaps = 31/324 (9%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           VTG  GFIG+ LV+ LL   +         G D       P    + +     D+ D   
Sbjct: 5   VTGGAGFIGSHLVERLLAAGHDVR------GLDRLRDGLDPL--LSGVEFVVLDLTDRDL 56

Query: 74  VSRAVEGCK-GVFHVASPCTLEDPVDPEKELIL-PAVQGTLNVLEAAKRFGVRRVVVTSS 131
           V    +G    V H+A+  ++ D    +    L   V GTLN+LEAA+  GV+R V  SS
Sbjct: 57  VDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASS 116

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
           +S +  +P       DE               Y VSK  AE+    +A  +G+ VV + P
Sbjct: 117 VSVVYGDP--PPLPIDEDLGPPRPL-----NPYGVSKLAAEQLLRAYARLYGLPVVILRP 169

Query: 192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP-------VKDVAKAQVLLFES 244
               GP  +P L +S  V   + Q  K        G          V DVA A +L  E+
Sbjct: 170 FNVYGPGDKPDL-SSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALEN 228

Query: 245 PAASGRYLCTNGI-YQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCK----DAAKRLMD 299
           P      + +        + AE V++                     +    D +K    
Sbjct: 229 PDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAA 288

Query: 300 LGL-VFTPVEDAVRETVESLKAKG 322
           LG      +E+ + +T+E L  K 
Sbjct: 289 LGWEPKVSLEEGLADTLEWLLKKL 312

Length = 314

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score =  125 bits (315), Expect = 5e-33
 Identities = 85/291 (29%), Positives = 132/291 (45%), Gaps = 36/291 (12%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-----FALPG 55
             + A+ E   VCVTG   F+G  +V  LL + Y S+   V    D   L     F   G
Sbjct: 45  GDAGADAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLREMEMFGEMG 103

Query: 56  AGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDP------EKELILPAVQ 109
             +  +    A++ +  ++  A +GC GVFH ++       VDP       K +     +
Sbjct: 104 RSNDGIWTVMANLTEPESLHEAFDGCAGVFHTSAF------VDPAGLSGYTKSMAELEAK 157

Query: 110 GTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGK-------VFDETSWTDLEYCKSRK 161
            + NV+EA  R   VR+ V TSS+ A V    W+         V DE SW+D  +C+  K
Sbjct: 158 ASENVIEACVRTESVRKCVFTSSLLACV----WRQNYPHDLPPVIDEESWSDESFCRDNK 213

Query: 162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ 221
            WY + K  AEKAAW  A   G+ +  I PA   GP    +   +       L+G+++  
Sbjct: 214 LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGP---GFFRRNSTATIAYLKGAQEML 270

Query: 222 EYHWLGAVPVKDVAKAQVLLFE---SPAASGRYLCTNGIYQFGDFAERVSK 269
               L    V+ +A+A V ++E   +  A GRY+C + +    D AE +++
Sbjct: 271 ADGLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELAR 321

Length = 367

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score =  118 bits (298), Expect = 7e-31
 Identities = 102/365 (27%), Positives = 152/365 (41%), Gaps = 89/365 (24%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTGA GF+G+ +V+ LL+     +   V P SD  +L  L         + E D+ D
Sbjct: 2   KVLVTGATGFVGSAVVRLLLEQGEE-VRVLVRPTSDRRNLEGLDV------EIVEGDLRD 54

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             ++ +AV GC+ +FHVA+   L  P DPE E+    V+GT N+L AA   GV RVV TS
Sbjct: 55  PASLRKAVAGCRALFHVAADYRLWAP-DPE-EMYAANVEGTRNLLRAALEAGVERVVYTS 112

Query: 131 SISAIVPNPGWKGKVFDETSWTDLE-----YCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
           S++ +       G   DET+ + L+     Y +        SK LAE+AA E A + G+ 
Sbjct: 113 SVATLGVRG--DGTPADETTPSSLDDMIGHYKR--------SKFLAEQAALEMAAEKGLP 162

Query: 186 VVAIHPATCLGPL------------------MQPYLNASCAVLQQLLQGSKDTQEYHWLG 227
           VV ++P+T +GP                   M  Y++                     L 
Sbjct: 163 VVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTG-------------------LN 203

Query: 228 AVPVKDVAKAQVLLFESPAASGRYLC-----------------TNG-----------IYQ 259
            V V DVA+  +L  E      RY+                  T             +  
Sbjct: 204 LVHVDDVAEGHLLALERGRIGERYILGGENLTLKQILDKLAEITGRPAPRVKLPRWLLLP 263

Query: 260 FGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPVEDAVRETVESLK 319
               AE +++L  + P    DG           +AK + +LG    P  +A+R+ VE  +
Sbjct: 264 VAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQRPAREALRDAVEWFR 323

Query: 320 AKGFL 324
           A G+L
Sbjct: 324 ANGYL 328

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  113 bits (285), Expect = 4e-29
 Identities = 86/333 (25%), Positives = 123/333 (36%), Gaps = 49/333 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTGA+GFIG+ L + LL   +  + A     S +S    L  A          DV D
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGH-EVRALDIYNSFNSW-GLLDNAVHDRFHFISGDVRD 58

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDP-VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           +  V   V+ C  VFH+A+   +      P    +   V GTLNVLEAA     +RVV T
Sbjct: 59  ASEVEYLVKKCDVVFHLAALIAIPYSYTAPL-SYVETNVFGTLNVLEAACVLYRKRVVHT 117

Query: 130 SS-----ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
           S+      +  VP         DE     L Y    +  Y  SK  A++ A+ +    G+
Sbjct: 118 STSEVYGTAQDVP--------IDEDH--PLLYINKPRSPYSASKQGADRLAYSYGRSFGL 167

Query: 185 DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV-PVKDV--AKAQVLL 241
            V  I P    GP           + Q+ +      Q    LG   P +D    K     
Sbjct: 168 PVTIIRPFNTYGPRQSARAVIPTIISQRAI-----GQRLINLGDGSPTRDFNFVKDTARG 222

Query: 242 F----ESPAASGRY--LCTNGIYQFGDFAERVSK------LFPEFPVHRFDGETQPG--- 286
           F    ++  A G      +      G+ A  +        +   +  HR           
Sbjct: 223 FIDILDAIEAVGEIINNGSGEEISIGNPAVELIVEELGEMVLIVYDDHREYRPGYSEVER 282

Query: 287 LIPCKDAAKRLMDLGLVFTP---VEDAVRETVE 316
            IP    AKRL+     + P   + D +RET+E
Sbjct: 283 RIPDIRKAKRLLG----WEPKYSLRDGLRETIE 311

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 97.4 bits (243), Expect = 8e-24
 Identities = 69/255 (27%), Positives = 98/255 (38%), Gaps = 40/255 (15%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ LV+ LL   Y  I          S            +R  E D+ D 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIV---LGRRRRSESL-----NTGRIRFHEGDLTDP 52

Query: 72  GAVSRAVEGCK--GVFHVASPC----TLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
            A+ R +   +   V H+A+      + EDP D     I   V GTL +LEAA+R GV+R
Sbjct: 53  DALERLLAEVQPDAVIHLAAQSGVGASFEDPAD----FIRANVLGTLRLLEAARRAGVKR 108

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWT-DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
            V  SS S +  +         E +    L         Y  +K  AE+    +A  +G+
Sbjct: 109 FVFASS-SEVYGDVA--DPPITEDTPLGPLSP-------YAAAKLAAERLVEAYARAYGL 158

Query: 185 DVVAIHPATCLGPLMQ--------PYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAK 236
             V +      GP           P L       + +L     TQ   +   + V DVA+
Sbjct: 159 RAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDF---LYVDDVAR 215

Query: 237 AQVLLFESPAASGRY 251
           A +L  E P     Y
Sbjct: 216 AILLALEHPDGGEIY 230

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 91.0 bits (226), Expect = 8e-21
 Identities = 64/199 (32%), Positives = 87/199 (43%), Gaps = 22/199 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +V VTG +GF G  LVK LL+   T +    F  +      AL      N+   + D+ D
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVR--SFDIAPP--GEALSAWQHPNIEFLKGDITD 56

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              V +A+ G   VFH A+   L  P D   E+    V GT NVL+A +R GV++ V TS
Sbjct: 57  RNDVEQALSGADCVFHTAAIVPLAGPRDLYWEV---NVGGTQNVLDACQRCGVQKFVYTS 113

Query: 131 SISAIVPNPGWKGKVF---DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
           S S I       G+     DET    L Y       Y  +K +AE    E   +  +   
Sbjct: 114 SSSVIFG-----GQNIHNGDET----LPYPPLDSDMYAETKAIAEIIVLEANGRDDLLTC 164

Query: 188 AIHPATCLGP---LMQPYL 203
           A+ PA   GP    + P L
Sbjct: 165 ALRPAGIFGPGDQGLVPIL 183

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 86.2 bits (214), Expect = 5e-20
 Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 66/250 (26%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ LV+ LL+  +                            V   D LD 
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGH---------------------------EVVVIDRLDV 33

Query: 72  GAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
                       V H+A+    P + ++P     E     V GTLN+LEAA++ GV+R V
Sbjct: 34  ------------VVHLAALVGVPASWDNPD----EDFETNVVGTLNLLEAARKAGVKRFV 77

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
             SS S        +G   +E +        S    Y VSK  AE     + E +G+ VV
Sbjct: 78  YASSASV---YGSPEGLPEEEETPP---RPLSP---YGVSKLAAEHLLRSYGESYGLPVV 128

Query: 188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY-------HWLGAVPVKDVAKAQVL 240
            +  A   GP  +P L+    V+   ++ + + +              + V DV +A + 
Sbjct: 129 ILRLANVYGPGQRPRLD---GVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILH 185

Query: 241 LFESPAASGR 250
             E+P   G 
Sbjct: 186 ALENPLEGGG 195

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 87.7 bits (218), Expect = 7e-20
 Identities = 91/327 (27%), Positives = 138/327 (42%), Gaps = 48/327 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTG  GFIG+ LV+ LL+  +  I   V     +     LP     N++  E D+ D 
Sbjct: 2   VLVTGGAGFIGSHLVERLLERGHEVI---VLDNLSTGKKENLP-EVKPNVKFIEGDIRDD 57

Query: 72  GAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
             V  A EG   VFH A+    P ++EDP+   +  +L    GTLN+LEAA++ GV+R V
Sbjct: 58  ELVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVL----GTLNLLEAARKAGVKRFV 113

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
             SS S     P       DE    +          Y VSK   E     FA  +G+  V
Sbjct: 114 YASSSSVYGDPP---YLPKDEDHPPNPLSP------YAVSKYAGELYCQVFARLYGLPTV 164

Query: 188 AIHPATCLGPLMQP---YLNASCAVLQQLLQG--------SKDTQEYHWLGAVPVKDVAK 236
           ++      GP   P   Y       +++ L+G         + T+++       V+DV +
Sbjct: 165 SLRYFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDF-----TYVEDVVE 219

Query: 237 AQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLF-PEF-PVHRFDGETQPGLIPCKDA 293
           A +L   + A    Y + T       + AE + ++   E  PV+      +PG +    A
Sbjct: 220 ANLLAATAGAGGEVYNIGTGKRTSVNELAELIREILGKELEPVYA---PPRPGDVRHSLA 276

Query: 294 A-KRLMDLGLVFTP---VEDAVRETVE 316
              +   L L + P    E+ +R TVE
Sbjct: 277 DISKAKKL-LGWEPKVSFEEGLRLTVE 302

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 82.3 bits (204), Expect = 7e-18
 Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 17/129 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH--LFALPGAGDANLRVFEADVL 69
           V VTGA+GFIG+ LV+ L+   Y  + A V   S +S   L   P      + V   D+ 
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYE-VRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDIR 59

Query: 70  DSGAVSRAVEGCKGVFHVAS----PCTLEDP---VDPEKELILPAVQGTLNVLEAAKRFG 122
           D  +V +A++GC  VFH+A+    P +   P   VD         V GTLNVL+AA+  G
Sbjct: 60  DPDSVRKAMKGCDVVFHLAALIAIPYSYIAPDSYVDTN-------VTGTLNVLQAARDLG 112

Query: 123 VRRVVVTSS 131
           V +VV TS+
Sbjct: 113 VEKVVHTST 121

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 81.6 bits (202), Expect = 9e-18
 Identities = 69/306 (22%), Positives = 107/306 (34%), Gaps = 33/306 (10%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADV--- 68
           VTG  GF+G  LVK LL+N +  +   V   S           G     +RV E D+   
Sbjct: 3   VTGGTGFLGRHLVKRLLENGF-KVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQP 61

Query: 69  ---LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
              L + A          V H A+     D   P ++     + GT +VLE A R  ++R
Sbjct: 62  NLGLSAAASRELAGKVDHVIHCAA---SYDFQAPNEDAWRTNIDGTEHVLELAARLDIQR 118

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
               S+        G           T+L   ++ K  Y  SK  AE+     A +  + 
Sbjct: 119 FHYVSTAYVAGNREGN-------IRETELNPGQNFKNPYEQSKAEAEQLVRAAATQ--IP 169

Query: 186 VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY--------HWLGAVPVKDVAKA 237
           +    P+  +G      +      L +LL        +          L  VPV  VA A
Sbjct: 170 LTVYRPSIVVGDSKTGRIE-KIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADA 228

Query: 238 QVLLFESPAASGR-YLCTNG-IYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAK 295
            V L + P A+G+ +  T+       + A+     F   P        +P         +
Sbjct: 229 IVYLSKKPEANGQIFHLTDPTPQTLREIADLFKSAF-LSPGLLVLLMNEPNASLPNALRR 287

Query: 296 RLMDLG 301
            L++L 
Sbjct: 288 SLLNLP 293

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 80.5 bits (199), Expect = 3e-17
 Identities = 50/189 (26%), Positives = 70/189 (37%), Gaps = 23/189 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTGANGFIG  LV  LL        A         +      +         A++ D
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIA-------VRNAENAEPSVVL------AELPD 47

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAV--QGTLNVLEAAKRFGVRRVVV 128
             + +    G   V H+A+   + +    +       V  + T  +  AA R GV+R V 
Sbjct: 48  IDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVF 107

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
            SS+          G  FDET     +        Y  SK  AE+A  E     G++VV 
Sbjct: 108 LSSVKVNG-EGT-VGAPFDETDPPAPQ------DAYGRSKLEAERALLELGASDGMEVVI 159

Query: 189 IHPATCLGP 197
           + P    GP
Sbjct: 160 LRPPMVYGP 168

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 78.9 bits (195), Expect = 7e-17
 Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 39/280 (13%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLDSG 72
           VTG  GF+G  +V+ LL          VF    S  L  L       +  + E DV D  
Sbjct: 2   VTGGGGFLGRHIVRLLLREG-ELQEVRVFDLRFSPEL--LEDFSKLQVITYIEGDVTDKQ 58

Query: 73  AVSRAVEGCKGVFHVASPCTLED--PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
            + RA++G   V H A+   + D         ++   V+GT NVL+A  + GVR +V TS
Sbjct: 59  DLRRALQGSDVVIHTAA---IIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTS 115

Query: 131 SISAIVPNPGWKGKVF---DETSWTDLEYCKSRKKWYPVSKTLAEKA-----AWEFAEKH 182
           S+  + PN    G+     DET      Y  + +  YP SK LAEK              
Sbjct: 116 SMEVVGPNSY--GQPIVNGDET----TPYESTHQDPYPESKALAEKLVLKANGSTLKNGG 169

Query: 183 GVDVVAIHPATCLGP---LMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQV 239
            +   A+ PA   G     + P+L           +             V V +VA A +
Sbjct: 170 RLYTCALRPAGIFGEGDPFLFPFLVRLLKNGLAKFRTGDKNVLSDR---VYVGNVAWAHI 226

Query: 240 LL-------FESPAASGR-YLCTNG--IYQFGDFAERVSK 269
           L         ++ + +G+ Y  ++      + DF   + K
Sbjct: 227 LAARALQDPKKASSIAGQFYFISDDTPHNSYDDFNRTLLK 266

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 77.5 bits (191), Expect = 5e-16
 Identities = 51/164 (31%), Positives = 70/164 (42%), Gaps = 8/164 (4%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVF---PGSDSSHLFALPGAGDANLRVFEADVLD 70
           VTG  GF+G  +++ LL+         V     G +    F     G   +   E D+ D
Sbjct: 4   VTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFE-KSQGKTYVTDIEGDIKD 62

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              + RA +G   V H A+   +  P + E EL    V GT  VLEA  +  V+R+V TS
Sbjct: 63  LSFLFRACQGVSVVIHTAAIVDVFGPPNYE-ELEEVNVNGTQAVLEACVQNNVKRLVYTS 121

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
           SI    PN  +KG+        D  Y  +    Y  SK LAE  
Sbjct: 122 SIEVAGPN--FKGRPI-FNGVEDTPYEDTSTPPYASSKLLAENI 162

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 70.9 bits (174), Expect = 8e-14
 Identities = 74/274 (27%), Positives = 115/274 (41%), Gaps = 37/274 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +  V G +GF+G  LV+ LL     +++  VF   D    F L  +    ++    D+ D
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVH--VF---DIRPTFELDPSSSGRVQFHTGDLTD 55

Query: 71  SGAVSRAVEGCKG---VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
              + +A    KG   VFH ASP    +     K      VQGT NV+EA ++ GV+++V
Sbjct: 56  PQDLEKAFN-EKGPNVVFHTASPDHGSNDDLYYK----VNVQGTRNVIEACRKCGVKKLV 110

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF-AEKHGVDV 186
            TSS S +           DE+    L Y    +  Y  +K LAEK   +    + G+  
Sbjct: 111 YTSSASVVFNGQDIING--DES----LPYPDKHQDAYNETKALAEKLVLKANDPESGLLT 164

Query: 187 VAIHPATCLGP---LMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
            A+ PA   GP    + P L  +    +   Q       + +     V++VA A +L  +
Sbjct: 165 CALRPAGIFGPGDRQLVPGLLKAAKNGKTKFQIGDGNNLFDF---TYVENVAHAHILAAD 221

Query: 244 -------SPAASGR-YLCTNG--IYQFGDFAERV 267
                  +   +G  +  TN   IY F DFA  +
Sbjct: 222 ALLSSSHAETVAGEAFFITNDEPIY-FWDFARAI 254

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 65.7 bits (161), Expect = 3e-12
 Identities = 53/217 (24%), Positives = 79/217 (36%), Gaps = 62/217 (28%)

Query: 10  ETVCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDSSHLFALPGAGDAN 60
           + + +TG  GF+G+ L   LL         DN +T     +       HL      G  N
Sbjct: 1   KRILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNI------EHL-----IGHPN 49

Query: 61  LRVFEADVLDS--GAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQGTLNV 114
                 DV +     V +       ++H+A P +      +P+    + +   V GTLN+
Sbjct: 50  FEFIRHDVTEPLYLEVDQ-------IYHLACPASPVHYQYNPI----KTLKTNVLGTLNM 98

Query: 115 LEAAKRFGVRRVVVTSSISA-----IVPNPGWKGKVFDETSW-----TDLEYCKSRKKWY 164
           L  AKR G  RV++ S+        + P P        E+ W          C      Y
Sbjct: 99  LGLAKRVGA-RVLLASTSEVYGDPEVHPQP--------ESYWGNVNPIGPRSC------Y 143

Query: 165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
              K +AE     +  +HGVDV         GP M P
Sbjct: 144 DEGKRVAETLCMAYHRQHGVDVRIARIFNTYGPRMHP 180

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 63.8 bits (156), Expect = 5e-12
 Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 16/137 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V V GA G +G  +V+ LLD  Y  + A V   S +  L A      A   V   D+ D
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQ-VRALVRDPSQAEKLEA------AGAEVVVGDLTD 53

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAV--QGTLNVLEAAKRFGVRRVVV 128
           + +++ A+EG   V   A     +     E      AV   G +N+++AAK+ GV+R V+
Sbjct: 54  AESLAAALEGIDAVISAAG-SGGKGGPRTE------AVDYDGNINLIDAAKKAGVKRFVL 106

Query: 129 TSSISAIVPNPGWKGKV 145
            SSI A  P+   +   
Sbjct: 107 VSSIGADKPSHPLEALG 123

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 7/122 (5%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFALPGAGDANLRVFEADVLD 70
           + VTG  GFIG+ LV  LL+         V    S        P   +   R  + D+LD
Sbjct: 2   ILVTGGAGFIGSHLVDRLLEEGN---EVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLD 58

Query: 71  SGAVSRAVEGCKGVFHVAS-PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           + A   A +    VFH+A+ P       DP+ +L    V  T NVLEA +  GV+R+V  
Sbjct: 59  T-ADKVAKKDGDTVFHLAANPDVRLGATDPDIDLEE-NVLATYNVLEAMRANGVKRIVFA 116

Query: 130 SS 131
           SS
Sbjct: 117 SS 118

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 62.7 bits (153), Expect = 2e-11
 Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 18/135 (13%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLDSG 72
           V GA G  G  +V+ LL +    + A T  P S ++   A PG       V + D+ D  
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGV-----EVVQGDLDDPE 57

Query: 73  AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI 132
           ++  A++G  GVF V            E E+     QG  NV++AAKR GV+  V +S  
Sbjct: 58  SLEAALKGVYGVFLVTDF----WEAGGEDEI----AQGK-NVVDAAKRAGVQHFVFSSVP 108

Query: 133 SA---IVPNPGWKGK 144
                 +  P +  K
Sbjct: 109 DVEKLTLAVPHFDSK 123

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 62.7 bits (153), Expect = 4e-11
 Identities = 47/191 (24%), Positives = 75/191 (39%), Gaps = 18/191 (9%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V + G NGFIG+ LV  LL+         VF    S   + LP  G   +   + D  + 
Sbjct: 2   VLIVGGNGFIGSHLVDALLEE---GPQVRVF--DRSIPPYELPLGG---VDYIKGDYENR 53

Query: 72  GAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             +  A+ G   V H+AS         +P  + I   V  T+ +LEA    G+ +++  S
Sbjct: 54  ADLESALVGIDTVIHLASTTNPATSNKNPILD-IQTNVAPTVQLLEACAAAGIGKIIFAS 112

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S   +   P  +     E+  T           Y +SK   EK    +   +G+D   + 
Sbjct: 113 SGGTVYGVP--EQLPISESDPTLPI------SSYGISKLAIEKYLRLYQYLYGLDYTVLR 164

Query: 191 PATCLGPLMQP 201
            +   GP  +P
Sbjct: 165 ISNPYGPGQRP 175

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 60.8 bits (148), Expect = 4e-11
 Identities = 48/224 (21%), Positives = 67/224 (29%), Gaps = 51/224 (22%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           V GA G  G  LVK LL         T    + S        A    +   + D+ D   
Sbjct: 3   VIGATGKTGRRLVKELLARG---HQVTALSRNPSK-------APAPGVTPVQKDLFDLAD 52

Query: 74  VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS 133
           ++ A+ G   V           P D +         G  ++L+AA R GVRR+VV S+  
Sbjct: 53  LAEALAGVDAVVDAFGA----RPDDSD---------GVKHLLDAAARAGVRRIVVVSAAG 99

Query: 134 AIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPAT 193
                PG                              A+ AA E     G+D   + P  
Sbjct: 100 LYRDEPGTFRLDDAPL---------------FPPYARAKAAAEELLRASGLDWTIVRP-- 142

Query: 194 CLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA 237
             G L               +    D        ++   DVA A
Sbjct: 143 --GALFDEEGE------TYEIGTEGDPAG---ESSISRADVAAA 175

Length = 182

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 61.9 bits (151), Expect = 1e-10
 Identities = 50/138 (36%), Positives = 68/138 (49%), Gaps = 18/138 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-----GAGDANLRVFE 65
           TV VTG  G IG+ L + +L  N   I   +F   D   L+ +         +  LR + 
Sbjct: 252 TVLVTGGGGSIGSELCRQILKFNPKEI--ILF-SRDEYKLYLIDMELREKFPELKLRFYI 308

Query: 66  ADVLDSGAVSRAVEGCK--GVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
            DV D   V RA+EG K   VFH A+    P  +E   +PE E I   V GT NV EAA 
Sbjct: 309 GDVRDRDRVERAMEGHKVDIVFHAAALKHVP-LVEY--NPE-EAIKTNVLGTENVAEAAI 364

Query: 120 RFGVRRVVVTSSISAIVP 137
           + GV++ V+ S+  A+ P
Sbjct: 365 KNGVKKFVLISTDKAVNP 382

Length = 588

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 5/147 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
             V +TG  GFIG+ L +  L   +     +  +  GS  +  +      D  +R    D
Sbjct: 1   MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60

Query: 68  VLDSGAVSRAVEGCKGVFHVAS-PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           + +   +    E    + H A+ P        P  +    A+ GTLNVLEAA++      
Sbjct: 61  IRNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNAL-GTLNVLEAARQHAPNAP 119

Query: 127 VVTSSISAIVPN-PGWKGKVFDETSWT 152
            + +S + +  + P +      ET + 
Sbjct: 120 FIFTSTNKVYGDLPNYLPLEELETRYE 146

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 57.1 bits (139), Expect = 2e-09
 Identities = 47/137 (34%), Positives = 62/137 (45%), Gaps = 18/137 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-----PGAGDANLRVFEA 66
           V VTG  G IG+ L + +L  N   I   +F   D   L+ +         D  LR F  
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKI--ILF-SRDEFKLYEIRQELRQEYNDPKLRFFIG 57

Query: 67  DVLDSGAVSRAVE--GCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
           DV D   + RA+E  G   VFH A+    P    +P+    E I   V GT NV EAA  
Sbjct: 58  DVRDRERLERAMEQHGVDTVFHAAALKHVPLVEYNPM----EAIKTNVLGTENVAEAAIE 113

Query: 121 FGVRRVVVTSSISAIVP 137
            GV + V+ S+  A+ P
Sbjct: 114 NGVEKFVLISTDKAVNP 130

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 38/179 (21%), Positives = 60/179 (33%), Gaps = 26/179 (14%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           + GA G  G+ +V+  L   +     T     D + L A        L+V + DVLD   
Sbjct: 4   IIGATGRTGSAIVREALARGH---EVTALV-RDPAKLPAE----HEKLKVVQGDVLDLED 55

Query: 74  VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS 133
           V  A+EG   V           P            +GT N++ A K  GV+R++V     
Sbjct: 56  VKEALEGQDAVISALGTRNDLSPTTL-------HSEGTRNIVSAMKAAGVKRLIVVGGAG 108

Query: 134 AIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPA 192
           ++   P              L+          V          +   + G+D  A+ P 
Sbjct: 109 SLDDRPKVTLV---------LDTLLFPPALRRV--AEDHARMLKVLRESGLDWTAVRPP 156

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 52.7 bits (127), Expect = 6e-08
 Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 23/155 (14%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           VTGA G +GT +V+ LL     S+ A V     +   FA  G       V + D  D   
Sbjct: 3   VTGATGKLGTAVVELLLAKV-ASVVALVRNPEKAK-AFAADGV-----EVRQGDYDDPET 55

Query: 74  VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS--- 130
           + RA EG   +  ++    LED +   K           N ++AAK+ GV+ +V  S   
Sbjct: 56  LERAFEGVDRLLLISPSD-LEDRIQQHK-----------NFIDAAKQAGVKHIVYLSASG 103

Query: 131 -SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY 164
               +        G        + + Y   R  W+
Sbjct: 104 ADEDSPFLLARDHGATEKYLEASGIPYTILRPGWF 138

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 52.6 bits (127), Expect = 6e-08
 Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 18/138 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF----ALPGAGDA-NLRVFE 65
           T+ VTG  G IG+ LV+ +L          +    D + L      L        LR   
Sbjct: 4   TILVTGGAGSIGSELVRQILK---FGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFII 60

Query: 66  ADVLDSGAVSRAVE--GCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
            DV D   + RA +  G   VFH A+    P ++ED   PE E I   V GT NV++AA 
Sbjct: 61  GDVRDKERLRRAFKERGPDIVFHAAALKHVP-SMEDN--PE-EAIKTNVLGTKNVIDAAI 116

Query: 120 RFGVRRVVVTSSISAIVP 137
             GV + V  S+  A+ P
Sbjct: 117 ENGVEKFVCISTDKAVNP 134

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 17/129 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTG  G+IG+  V  LL+  Y   +  V     + H  ALP      +  +E D+ D
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGY---DVVVLDNLSNGHREALPRIEKIRIEFYEGDIRD 57

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPA------VQGTLNVLEAAKRFG 122
             A+ +     K   V H A+   + + V        P       V GTLN+LEA +  G
Sbjct: 58  RAALDKVFAEHKIDAVIHFAALKAVGESVQ------KPLKYYDNNVVGTLNLLEAMRAHG 111

Query: 123 VRRVVVTSS 131
           V+  V +SS
Sbjct: 112 VKNFVFSSS 120

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 23/192 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
            V +TGA+GF+G  L + LL +  N   I   V      S        G   +     D+
Sbjct: 2   KVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKAPS--------GAPRVTQIAGDL 53

Query: 69  LDSGAVSRAVEG-CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRV 126
                +     G    VFH+A+  +     D +    +  V GT N+LEA ++ G   R 
Sbjct: 54  AVPALIEALANGRPDVVFHLAAIVSGGAEADFDLGYRV-NVDGTRNLLEALRKNGPKPRF 112

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V TSS++           V D T+             Y   K + E    +++ +  VD 
Sbjct: 113 VFTSSLAVYGLPL--PNPVTDHTALDPASS-------YGAQKAMCELLLNDYSRRGFVDG 163

Query: 187 VAIHPAT-CLGP 197
             +   T C+ P
Sbjct: 164 RTLRLPTVCVRP 175

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 21/132 (15%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVF----PGSDSSHLFALPGAGDANLRVFEA 66
            V VTG  GF G+WL   L +     + A V         + +LF L    D  +     
Sbjct: 6   RVLVTGHTGFKGSWLSLWLQE-----LGAKVIGYSLDPPTNPNLFEL-ANLDNKISSTRG 59

Query: 67  DVLDSGAVSRAVEGCKG--VFHVA-SPC---TLEDPVDPEKELILPAVQGTLNVLEAAKR 120
           D+ D  A+  A+   +   VFH+A  P    + +DPV    E     V GT+N+LEA + 
Sbjct: 60  DIRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPV----ETFETNVMGTVNLLEAIRE 115

Query: 121 FG-VRRVVVTSS 131
            G V+ VV  +S
Sbjct: 116 TGSVKAVVNVTS 127

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 51.0 bits (123), Expect = 3e-07
 Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 16/127 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTG  G+IG+  V+ LL   +      V     + H  AL        + +E D+LD
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGH---EVVVLDNLSNGHKIALL---KLQFKFYEGDLLD 55

Query: 71  SGAVSR--AVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
              ++          V H A+      ++++P+    +     V GTLN++EA  + GV+
Sbjct: 56  RALLTAVFEENKIDAVVHFAASISVGESVQNPL----KYYDNNVVGTLNLIEAMLQTGVK 111

Query: 125 RVVVTSS 131
           + + +S+
Sbjct: 112 KFIFSST 118

Length = 329

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 50.8 bits (122), Expect = 3e-07
 Identities = 55/192 (28%), Positives = 71/192 (36%), Gaps = 26/192 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLD 70
           + VTGA G +G  L + L  +    +            L      G      +   D+ D
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPR--VIGVDG-------LDRRRPPGSPPKVEYVRLDIRD 51

Query: 71  SGAVSRAVE-GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             A     E     V H+A    L+ P D   E     V GT NVL+A    GV RVVVT
Sbjct: 52  PAAADVFREREADAVVHLAF--ILDPPRDGA-ERHRINVDGTQNVLDACAAAGVPRVVVT 108

Query: 130 SSI---SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVD 185
           SS+    A   NP         T    L         Y   K   E+   EF  +H  ++
Sbjct: 109 SSVAVYGAHPDNPAP------LTEDAPLRGSPEFA--YSRDKAEVEQLLAEFRRRHPELN 160

Query: 186 VVAIHPATCLGP 197
           V  + PAT LGP
Sbjct: 161 VTVLRPATILGP 172

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 39/150 (26%), Positives = 55/150 (36%), Gaps = 27/150 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVL 69
            V +TG +  IG  L   L    Y      V   + +   L +L    + NL V E DV 
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYR-----VIATARNPDKLESLGELLNDNLEVLELDVT 56

Query: 70  DSGAVSRAVEGCKGVFH----------VASPCTLEDPVDPE--KELILPAVQGTLNVLEA 117
           D  ++  AV+     F                 LE+    E  +EL    V G L V  A
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEE-TSIEEVRELFEVNVFGPLRVTRA 115

Query: 118 A------KRFGVRRVVVTSSISAIVPNPGW 141
                  +  G  R+V  SS++ +VP P  
Sbjct: 116 FLPLMRKQGSG--RIVNVSSVAGLVPTPFL 143

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 21/131 (16%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDA-NLRVFEADVL 69
            V V GA GFIG ++V  L       I     P    ++   L   GD   +   E D+ 
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVI----VPYRCEAYARRLLVMGDLGQVLFVEFDLR 57

Query: 70  DSGAVSRAVEGCK------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           D  ++ +A+EG        G  +     + ED V          V+G   + +AAK  GV
Sbjct: 58  DDESIRKALEGSDVVINLVGRLYETKNFSFED-VH---------VEGPERLAKAAKEAGV 107

Query: 124 RRVVVTSSISA 134
            R++  S++ A
Sbjct: 108 ERLIHISALGA 118

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 49.6 bits (119), Expect = 7e-07
 Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 6/123 (4%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLD 70
           + VTG  G+IG+  V+ LL++ +  +   +     +    ALP         F E D+ D
Sbjct: 2   ILVTGGAGYIGSHTVRQLLESGHEVV---ILDNLSNGSREALPRGERITPVTFVEGDLRD 58

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
              + R  E  K   V H A    + + V    +     V GTLN+LEA ++ GV++ + 
Sbjct: 59  RELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFIF 118

Query: 129 TSS 131
           +SS
Sbjct: 119 SSS 121

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 49.5 bits (119), Expect = 9e-07
 Identities = 78/341 (22%), Positives = 131/341 (38%), Gaps = 79/341 (23%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + VTG  G +G+ +V+ L    Y ++   VF  S                   E D+ D
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENV---VFRTSK------------------ELDLTD 39

Query: 71  SGAVSRAVEGCK--GVFHVASPC-----TLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
             AV    E  K   V H+A+        +  P D     +   +    NV+ AA RFGV
Sbjct: 40  QEAVRAFFEKEKPDYVIHLAAKVGGIVANMTYPAD----FLRDNLLINDNVIHAAHRFGV 95

Query: 124 RRVVVTSSISAIVPNPGWKGKV-FDETS-WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
           +++V   S S I P+         DE+   T     +   + Y ++K    K    + ++
Sbjct: 96  KKLVFLGS-SCIYPD---LAPQPIDESDLLT--GPPEPTNEGYAIAKRAGLKLCEAYRKQ 149

Query: 182 HGVDVVAIHPATCLGP--------------LMQPYLNASCAVLQQL-LQGS-KDTQEYHW 225
           +G D +++ P    GP              L++ +  A     +++ + GS    +E+ +
Sbjct: 150 YGCDYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTPRREFLY 209

Query: 226 LGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFG--------DFAERVSKLFPEFPVH 277
                  D+A+A V L E+            I   G        + AE ++++       
Sbjct: 210 -----SDDLARAIVFLLENYD-------EPIIVNVGSGVEISIRELAEAIAEVVGFKGEI 257

Query: 278 RFDGETQPGLIPCKDAA-KRLMDLGLV-FTPVEDAVRETVE 316
            FD  ++P   P K     +L  LG   FTP+E  +RET E
Sbjct: 258 VFD-TSKPDGQPRKLLDVSKLRALGWFPFTPLEQGIRETYE 297

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 47.5 bits (114), Expect = 1e-06
 Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 20/147 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINAT---VFPGSDSSHLFA-LPGAGDANLRVFEA 66
           T  VTG  G +G  L + L +     +        P  ++  L A L   G A + V   
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARG-AEVTVVAC 60

Query: 67  DVLDSGAVSRAVEGC-------KGVFHVASPCTLED----PVDPE--KELILPAVQGTLN 113
           DV D  AV   +          +GV H A    L D     +  E    ++ P V G  N
Sbjct: 61  DVSDRDAVRALLAEIRADGPPLRGVIHAAG--VLRDALLANMTAEDFARVLAPKVTGAWN 118

Query: 114 VLEAAKRFGVRRVVVTSSISAIVPNPG 140
           + EA +   +   V+ SSI+ ++ +PG
Sbjct: 119 LHEATRDRPLDFFVLFSSIAGVLGSPG 145

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 10/118 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V +TG  G IG+ L++ LL+  +  +    F      HL   P     NL V E  + D 
Sbjct: 3   VLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHP-----NLTVVEGSIADK 57

Query: 72  GAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
             V +     K   V H A+    +DP D  ++  L  V G  NV++AAK+ GV+R++
Sbjct: 58  ALVDKLFGDFKPDAVVHTAA--AYKDPDDWYED-TLTNVVGGANVVQAAKKAGVKRLI 112

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 50/247 (20%), Positives = 88/247 (35%), Gaps = 40/247 (16%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           T  V GA+G IG  + + L    +     +               A    + +  AD +D
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKL---------AWLPGVEIVAADAMD 51

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
           + +V  A  G   ++H A+P           EL  P ++   NV+ AA+  G  ++V+  
Sbjct: 52  ASSVIAAARGADVIYHCANPAYTRWE-----ELFPPLME---NVVAAAEANG-AKLVLPG 102

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           ++    P  G    + ++T +       +RK      +   E+       K  +  + + 
Sbjct: 103 NVYMYGPQAG--SPITEDTPFQPT----TRKGRI---RAEMEERLLAAHAKGDIRALIVR 153

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP-------VKDVAKAQVLLFE 243
                GP       A  + L   L      +   + G +        + DVA+A V L E
Sbjct: 154 APDFYGP------GAINSWLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAE 207

Query: 244 SPAASGR 250
            P A G 
Sbjct: 208 EPDAFGE 214

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 48/195 (24%), Positives = 72/195 (36%), Gaps = 33/195 (16%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + + GA GFIG  L + LL+  +     T+   +       L       + V E D+ D 
Sbjct: 1   ILILGATGFIGRALARELLEQGH---EVTLLVRNTK----RLSKEDQEPVAVVEGDLRDL 53

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
            ++S AV+G   V H+A           +   +    +GT NVLEAAK  GV+  +  SS
Sbjct: 54  DSLSDAVQGVDVVIHLAG----APRDTRDFCEVDV--EGTRNVLEAAKEAGVKHFIFISS 107

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA-EKHGVDVVAIH 190
           + A         +                    P S  LA KA  E    +  +    + 
Sbjct: 108 LGA---YGDLHEETEPS----------------PSSPYLAVKAKTEAVLREASLPYTIVR 148

Query: 191 PATCLGPLMQPYLNA 205
           P    G L +   NA
Sbjct: 149 PGVIYGDLARAIANA 163

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 47.7 bits (113), Expect = 3e-06
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
           +++ + +TG  G  G  +++  LD +   I   +F   +           ++ L+ +  D
Sbjct: 3   KDKILLITGGTGSFGNAVLRRFLDTDIKEIR--IFSRDEKKQDDMRKKYNNSKLKFYIGD 60

Query: 68  VLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           V D  ++  A  G   ++H A+    P     P++  K  +L    GT NVLEAA   GV
Sbjct: 61  VRDYRSILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVL----GTENVLEAAIANGV 116

Query: 124 RRVVVTSSISAIVP 137
           +RVV  S+  A+ P
Sbjct: 117 KRVVCLSTDKAVYP 130

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 47.1 bits (112), Expect = 5e-06
 Identities = 42/200 (21%), Positives = 68/200 (34%), Gaps = 30/200 (15%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE---A 66
           +   VTGA GFIG+ L + L    +         G+D       P          E    
Sbjct: 1   QRALVTGAGGFIGSHLAERLKAEGHYVR------GADWKS----PEHMTQPTDDDEFHLV 50

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELIL-PAVQGTLNVLEAAKRFGVRR 125
           D+ +     +A EG   VFH+A+       +     +I+        N+LEAA+  GV R
Sbjct: 51  DLREMENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVER 110

Query: 126 VVVTSS-------ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
            +  SS                 +    +E +W         +  Y   K   E+    +
Sbjct: 111 FLFASSACVYPEFKQLETTVVRLR----EEDAWPA-----EPQDAYGWEKLATERLCQHY 161

Query: 179 AEKHGVDVVAIHPATCLGPL 198
            E +G++   +      GP 
Sbjct: 162 NEDYGIETRIVRFHNIYGPR 181

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 46.2 bits (110), Expect = 9e-06
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 14/124 (11%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTGA G++G  LV  LL   +  + A V        L   P +    + V   D+ D 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGH-QVRALV---RSPEKLADRPWSE--RVTVVRGDLEDP 54

Query: 72  GAVSRAVEGCKGVFH-VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
            ++  A+EG    ++ V S  +  D  + ++           N   AA+  GV+R++   
Sbjct: 55  ESLRAALEGIDTAYYLVHSMGSGGDFEEADRRA-------ARNFARAARAAGVKRIIYLG 107

Query: 131 SISA 134
            +  
Sbjct: 108 GLIP 111

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 16/127 (12%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSG 72
           VTGA G IG+ +  TLL+             SD  +   A  GA      V   D+ D  
Sbjct: 3   VTGATGRIGSKVATTLLEAGR---PVRALVRSDERAAALAARGA-----EVVVGDLDDPA 54

Query: 73  AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI 132
            ++ A+ G   VF +A P     P    +   + A +       A +  GV+RVV  SS+
Sbjct: 55  VLAAALAGVDAVFFLAPP----APTADARPGYVQAAE---AFASALREAGVKRVVNLSSV 107

Query: 133 SAIVPNP 139
            A   +P
Sbjct: 108 GADPESP 114

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 9/116 (7%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS----HLFALPGAGDANLRVFEADVL 69
           +TG  G  G++L + LL+  Y  ++      S  +    HL+  P   D  L +   D+ 
Sbjct: 7   ITGITGQDGSYLAELLLEKGYE-VHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLT 65

Query: 70  DSGAVSRAVEGCKG--VFHVASPCTLEDPVD-PEKELILPAVQGTLNVLEAAKRFG 122
           DS  + R +E  +   ++++A+   +    + PE    + A+ GTL +LEA +  G
Sbjct: 66  DSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAI-GTLRLLEAIRILG 120

Length = 345

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 49/202 (24%), Positives = 73/202 (36%), Gaps = 47/202 (23%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           +TGA+  IG  LV+ LL     ++ AT    S ++ L AL GA  + L + E DV D  A
Sbjct: 3   ITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAAL-GASHSRLHILELDVTDEIA 61

Query: 74  VS----RAVEGCKG---VFH---VASPCTLEDPVDPEKELILPAVQ--GTLNVLEAAK-- 119
            S        G  G   + +   +         VD E  L +  V   G L + +A    
Sbjct: 62  ESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAFLPL 121

Query: 120 -RFGVRRVVVT-----SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT---- 169
              G R  ++       SI        +                      Y  SK     
Sbjct: 122 LLKGARAKIINISSRVGSIGDNTSGGWYS---------------------YRASKAALNM 160

Query: 170 LAEKAAWEFAEKHGVDVVAIHP 191
           L +  A E  ++ G+ VV++HP
Sbjct: 161 LTKSLAVEL-KRDGITVVSLHP 181

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 49/183 (26%), Positives = 69/183 (37%), Gaps = 31/183 (16%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE-ADVLD 70
           + +TG  G IG+ L K LL   Y   N      SD       P A       FE  DVLD
Sbjct: 2   ILITGGLGQIGSELAK-LLRKRYGKDNVIA---SD----IRKPPAHVVLSGPFEYLDVLD 53

Query: 71  SGAVSRAVE--GCKGVFHVAS--PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
             ++   V       + H+A+      E       ++    + G  NVLE A+   + R+
Sbjct: 54  FKSLEEIVVNHKITWIIHLAALLSAVGEKNPPLAWDV---NMNGLHNVLELAREHNL-RI 109

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDL--EYCKSR-KKWYPVSKTLAEKAAWEFAEKHG 183
            V S+I A           F  T+  +   +    R +  Y VSK  AE     +  K G
Sbjct: 110 FVPSTIGA-----------FGPTTPRNNTPDDTIQRPRTIYGVSKVAAELLGEYYHHKFG 158

Query: 184 VDV 186
           VD 
Sbjct: 159 VDF 161

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 14/140 (10%)

Query: 6   EKEEETVCVTGANGFIGTWLVKTLLDNNYTSI----NATVFPGSDSS--HLFALPGAGDA 59
           E ++ TV V GA G+IG ++V+ L+   Y  +      +   G +        LPGA   
Sbjct: 57  EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGA--- 113

Query: 60  NLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
              V   DV D+ ++ + +        V   C L       K+      Q T N L+A +
Sbjct: 114 --EVVFGDVTDADSLRKVLFSEGDPVDVVVSC-LASRTGGVKDSWKIDYQATKNSLDAGR 170

Query: 120 RFGVRRVVVTSSISAIVPNP 139
             G +  V+ S+I   V  P
Sbjct: 171 EVGAKHFVLLSAIC--VQKP 188

Length = 390

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 44.4 bits (106), Expect = 3e-05
 Identities = 40/152 (26%), Positives = 56/152 (36%), Gaps = 28/152 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG---AGDANLRVFEAD 67
           T  VTGA+  IG  +   L  +    +       S+     AL     A     RV   D
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIY----DSNEEAAEALAAELRAAGGEARVLVFD 62

Query: 68  VLDSGAVSRAVE-------GCKGVFHVA---SPCTLEDPVDPE--KELILPAVQGTLNVL 115
           V D  AV   +E           + + A       L   +  E    +I   + GT NV+
Sbjct: 63  VSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPR-MSEEDWDRVIDVNLTGTFNVV 121

Query: 116 EAA------KRFGVRRVVVTSSISAIVPNPGW 141
            AA       R+G  R+V  SS+S +  NPG 
Sbjct: 122 RAALPPMIKARYG--RIVNISSVSGVTGNPGQ 151

Length = 246

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 43.2 bits (103), Expect = 3e-05
 Identities = 37/151 (24%), Positives = 57/151 (37%), Gaps = 28/151 (18%)

Query: 11  TVCVTGANGFIG----TWLVKT-----LLDNNYTSINATVFPGSDSSHLFALPGAGDANL 61
           T  +TG  G +G     WL +      +L     S +    PG+    L A   A  A +
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVL----LSRSGPDAPGAA--ALLAELEAAGARV 55

Query: 62  RVFEADVLDSGAVSRAVEGC-------KGVFH---VASPCTLEDPVDPE--KELILPAVQ 109
            V   DV D  A++  +           GV H   V     L   + PE    ++ P   
Sbjct: 56  TVVACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLAS-LTPERFAAVLAPKAA 114

Query: 110 GTLNVLEAAKRFGVRRVVVTSSISAIVPNPG 140
           G  N+ E      +   V+ SSI+ ++ +PG
Sbjct: 115 GAWNLHELTADLPLDFFVLFSSIAGVLGSPG 145

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 44.7 bits (106), Expect = 4e-05
 Identities = 38/151 (25%), Positives = 54/151 (35%), Gaps = 18/151 (11%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDN---NYTSINATVFPGSDSSHLFALPGAGD--ANL 61
           K      VTG  G IG  L + L          +  +  P  +      L       A +
Sbjct: 203 KPGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARV 262

Query: 62  RVFEADVLDSGAVSRAVEGCK-------GVFHVA---SPCTLEDPVDPE--KELILPAVQ 109
               ADV D+ AV R +E  +       GV H A       L      E  + ++ P V 
Sbjct: 263 LYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQ-KTAEDFEAVLAPKVD 321

Query: 110 GTLNVLEAAKRFGVRRVVVTSSISAIVPNPG 140
           G LN+ +A     +   V+ SS+SA     G
Sbjct: 322 GLLNLAQALADEPLDFFVLFSSVSAFFGGAG 352

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 11/126 (8%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +V +TG  G+ G  L   L  +    I   +           LP      ++  +ADV D
Sbjct: 1   SVLITGGGGYFGFRLGCALAKSGVHVILFDI-----RRPQQELP----EGIKFIQADVRD 51

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPA-VQGTLNVLEAAKRFGVRRVVVT 129
              + +AV G   VFH+AS   +       +ELI    V+GT N+++   R  V R++ T
Sbjct: 52  LSQLEKAVAGVDCVFHIAS-YGMSGREQLNRELIEEINVRGTENIIQVCVRRRVPRLIYT 110

Query: 130 SSISAI 135
           S+ + I
Sbjct: 111 STFNVI 116

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 43.3 bits (103), Expect = 4e-05
 Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 33/154 (21%)

Query: 11  TVCVTGANGFIGT----WLVK------TLLDNNYTSINATVFPGSDSSHLFA-LPGAGDA 59
           TV +TG  G +G     WL         L+            P   ++ L A L   G A
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRR--------GPAPGAAELVAELEALG-A 52

Query: 60  NLRVFEADVLDSGAVSRAVEGCK-------GVFH---VASPCTLEDPVDPE--KELILPA 107
            + V   DV D  A++  +           GV H   V     LE+ + PE  + ++ P 
Sbjct: 53  EVTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEE-LTPERFERVLAPK 111

Query: 108 VQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW 141
           V G  N+ E  +   +   V+ SS++ ++ +PG 
Sbjct: 112 VTGAWNLHELTRDLDLGAFVLFSSVAGVLGSPGQ 145

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 34/198 (17%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
           +++TV VTGAN  IG   V++LL +    + A V     ++HL A  G     LR+   D
Sbjct: 2   KDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRL---D 58

Query: 68  VLDSGAVSRAVEGCK---------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA- 117
           V D  ++  A    K         GV   A+          ++E+ +  V G L + +A 
Sbjct: 59  VTDPESIKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDV-NVFGLLRLAQAF 117

Query: 118 ---AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
               K  G   +V  +S++++   P                Y  S+   Y +++ L    
Sbjct: 118 APVLKANGGGAIVNLNSVASLKNFPAMGT------------YSASKSAAYSLTQGLRA-- 163

Query: 175 AWEFAEKHGVDVVAIHPA 192
             E A + G  V+++HP 
Sbjct: 164 --ELAAQ-GTLVLSVHPG 178

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 43.4 bits (103), Expect = 6e-05
 Identities = 57/261 (21%), Positives = 88/261 (33%), Gaps = 57/261 (21%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTGA   IG  +   L  +    I   +     ++    +  AG    R  + DV D
Sbjct: 8   VALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG-KARARQVDVRD 66

Query: 71  SGAVSRAVE-------GCKGVFH---VASPCTLEDPVDPE--KELILPAVQGTLNVLEAA 118
             A+  AV            +     +       + +D E  + +I   + GT  + +AA
Sbjct: 67  RAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAE-MDDEQWERVIDVNLTGTFLLTQAA 125

Query: 119 ----KRFGVRRVVVTSSISA-IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
                R G  R+V+TSS++   V  PG               Y  S  K   V  T A  
Sbjct: 126 LPALIRAGGGRIVLTSSVAGPRVGYPGLAH------------YAAS--KAGLVGFTRA-- 169

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK- 232
            A E A    + V ++HP     P+     +A     + +              A+P+  
Sbjct: 170 LALELAA-RNITVNSVHPGGVDTPMAGNLGDAQ--WAEAIAA------------AIPLGR 214

Query: 233 -----DVAKAQVLLFESPAAS 248
                D+A A VL   S  A 
Sbjct: 215 LGEPEDIAAA-VLFLASDEAR 234

Length = 251

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADV 68
          +   VTGA   IG+ + + LL++ Y  I AT F G+D +   F   G  +  +R+ E DV
Sbjct: 3  KIALVTGAKRGIGSAIARELLNDGYRVI-ATYFSGNDCAKDWFEEYGFTEDQVRLKELDV 61

Query: 69 LDSGAVSRAV 78
           D+   + A+
Sbjct: 62 TDTEECAEAL 71

Length = 245

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 19/136 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-----GSDSSHLFALPGAGDANLRVFE 65
           ++ +TG  G  G   +  LL  NY      ++        +    F  P      LR F 
Sbjct: 6   SILITGGTGSFGKAFISRLL-ENYNPKKIIIYSRDELKQWEMQQKFPAP-----CLRFFI 59

Query: 66  ADVLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
            DV D   ++RA+ G   V H A+    P    +P     E I   + G  NV++AA   
Sbjct: 60  GDVRDKERLTRALRGVDYVVHAAALKQVPAAEYNPF----ECIRTNINGAQNVIDAAIDN 115

Query: 122 GVRRVVVTSSISAIVP 137
           GV+RVV  S+  A  P
Sbjct: 116 GVKRVVALSTDKAANP 131

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 36/186 (19%), Positives = 60/186 (32%), Gaps = 37/186 (19%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVF----PGSDSS-----------HLFALPGAGD 58
           +TGA GF+G  L++ LL    ++    ++         S           +         
Sbjct: 1   LTGATGFLGKVLLEKLLR---STPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKAL 57

Query: 59  ANLRVFEADV------LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTL 112
             +     D+      L         E    + H A+       V+P  +L    V GT 
Sbjct: 58  ERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNF---VEPYSDLRATNVLGTR 114

Query: 113 NVLEAAKRFGVRRVV-VTSSISAIVPNPGWKGKVFDETSWTDLEYC-KSRKKW---YPVS 167
            VL  AK+        V+++        G +G + +E  +   E            Y  S
Sbjct: 115 EVLRLAKQMKKLPFHHVSTAYVN-----GERGGLLEEKPYKLDEDEPALLGGLPNGYTQS 169

Query: 168 KTLAEK 173
           K LAE+
Sbjct: 170 KWLAEQ 175

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 25/184 (13%)

Query: 14  VTGANGFIGTWLVKTLLDN--NYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           VTG  GFIG+  V+ LL+   +Y  IN   +    +  +L  +  +     R  + D+ D
Sbjct: 5   VTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDV--SSSPRYRFVKGDICD 62

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAAKRFGV 123
           +  V R  E  K   V H A+    E  VD     PE   I   V GT  +LEAA+++GV
Sbjct: 63  AELVDRLFEEEKIDAVIHFAA----ESHVDRSISDPE-PFIRTNVLGTYTLLEAARKYGV 117

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           +R V  S+    V         F ETS        +    Y  SK  A+     +   +G
Sbjct: 118 KRFVHISTDE--VYGDLLDDGEFTETS----PLAPTSP--YSASKAAADLLVRAYHRTYG 169

Query: 184 VDVV 187
           + VV
Sbjct: 170 LPVV 173

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 44/209 (21%), Positives = 71/209 (33%), Gaps = 43/209 (20%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V +TG  G +G      L       +       +  S    LPG     LR+   D++D 
Sbjct: 10  VAITGGFGGLGRATAAWLA-ARGARVALIGRGAAPLSQ--TLPGVPADALRIGGIDLVDP 66

Query: 72  GAVSRAVE-------GCKGVFHVA---SPCTLEDPVDPEKELILPA-VQGTLNVLEAA-- 118
            A  RAV+           + ++A      T+ D      + +    V+ TLN  +AA  
Sbjct: 67  QAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALP 126

Query: 119 --KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT----LAE 172
                G  R+V   + +A+   PG                       Y  +K     L E
Sbjct: 127 ALTASGGGRIVNIGAGAALKAGPGMGA--------------------YAAAKAGVARLTE 166

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
             A E  ++ G+ V A+ P+    P  + 
Sbjct: 167 ALAAELLDR-GITVNAVLPSIIDTPPNRA 194

Length = 239

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 23/134 (17%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTS-INATVFPGS-----------DSSHLFALPG-AGDAN 60
           VTG  GFIG  LV  LLD    + ++  V   S            +  +  L G   +  
Sbjct: 5   VTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPG 64

Query: 61  LRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
           L + EAD+ + G +         V H+A+   + D    E+      V GT NV+E A+R
Sbjct: 65  LGLSEADIAELGDIDH-------VVHLAA---IYDLTADEEAQRAANVDGTRNVVELAER 114

Query: 121 FGVRRVVVTSSISA 134
                    SSI+ 
Sbjct: 115 LQAATFHHVSSIAV 128

Length = 657

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 56/267 (20%), Positives = 87/267 (32%), Gaps = 52/267 (19%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTS-INATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDS 71
           VTGA+  IG  + + L        + A       +  L A +  AG        ADV D 
Sbjct: 10  VTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDD 69

Query: 72  -GAVSRAVEGCK-------------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
             +V   V   +             G+    +P       D ++ + +  +   L    A
Sbjct: 70  EESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAA 129

Query: 118 AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLAEK 173
                 +R+V  SS++ +   PG                       Y  SK     L + 
Sbjct: 130 LPLMKKQRIVNISSVAGLGGPPGQAA--------------------YAASKAALIGLTKA 169

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-AVPVK 232
            A E A   G+ V A+ P     P+     +A    L++L            LG     +
Sbjct: 170 LALELA-PRGIRVNAVAPGYIDTPMTAALESAELEALKRLAAR-------IPLGRLGTPE 221

Query: 233 DVAKAQVLLFESPAAS---GRYLCTNG 256
           +VA A   L    AAS   G+ L  +G
Sbjct: 222 EVAAAVAFLASDEAASYITGQTLPVDG 248

Length = 251

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 22/129 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVF-----PGSDSSHLFALPGAGDANLRVFE 65
            V VTG  GF G+WL   L       + A V+     P +  +    L  A         
Sbjct: 6   KVLVTGHTGFKGSWLSLWL-----LELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHF-- 58

Query: 66  ADVLDSGAVSRAVEGCKG--VFHVAS-PC---TLEDPVDPEKELILPAVQGTLNVLEAAK 119
            D+ D+  + +A+   K   VFH+A+ P    +  DP+    E     V GT+N+LEA +
Sbjct: 59  GDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPL----ETFETNVMGTVNLLEAIR 114

Query: 120 RFGVRRVVV 128
             G  + VV
Sbjct: 115 AIGSVKAVV 123

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 18/135 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS----HLFALPGAGDANLRVFEA 66
              +TG  G  G++L + LL+  Y          S ++    HL+         + +   
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLY----INKDRITLHYG 56

Query: 67  DVLDSGAVSRAVEGCKG--VFHVA----SPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
           D+ DS ++ RA+E  +   ++H+A       + +DP             GTLN+LEA + 
Sbjct: 57  DLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPE----YTAEVNAVGTLNLLEAIRI 112

Query: 121 FGVRRVVVTSSISAI 135
            G+      +S S  
Sbjct: 113 LGLDARFYQASSSEE 127

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 51/203 (25%), Positives = 69/203 (33%), Gaps = 20/203 (9%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDA----------N 60
            V +TGA GF+G +L+  LLD +   +   V   SD + L  L    D            
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADR 61

Query: 61  LRVFEADV------LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNV 114
           + V   D+      L         E    + H A+   L + V P  EL    V GT  V
Sbjct: 62  VEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAA---LVNHVFPYSELRGANVLGTAEV 118

Query: 115 LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
           L  A     + +   SSIS           V  +         +     Y  SK +AEK 
Sbjct: 119 LRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKL 178

Query: 175 AWEFAEKHGVDVVAIHPATCLGP 197
             E A   G+ V    P    G 
Sbjct: 179 VRE-AGDRGLPVTIFRPGYITGD 200

Length = 382

>gnl|CDD|235630 PRK05865, PRK05865, hypothetical protein; Provisional

 Score = 41.2 bits (96), Expect = 6e-04
 Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 19/120 (15%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTGA+G +G  L   LL   +  +      G       + P + D       AD+ D+
Sbjct: 3   IAVTGASGVLGRGLTARLLSQGHEVV------GIARHRPDSWPSSAD----FIAADIRDA 52

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
            AV  A+ G   V H A              +    + GT NVL+A    G  R+V TSS
Sbjct: 53  TAVESAMTGADVVAHCAW------VRGRNDHI---NIDGTANVLKAMAETGTGRIVFTSS 103

Length = 854

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score = 40.4 bits (94), Expect = 8e-04
 Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 38/201 (18%)

Query: 12  VCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDSSHLFALPGAGDANLR 62
           + VTG  GF+G+ LV  L+         DN +T     +       HLF     G+    
Sbjct: 123 IVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLV------HLF-----GNPRFE 171

Query: 63  VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAA 118
           +   DV++   +         ++H+A P +   PV    +P K  I   V GTLN+L  A
Sbjct: 172 LIRHDVVEPILLE-----VDQIYHLACPAS---PVHYKYNPVKT-IKTNVMGTLNMLGLA 222

Query: 119 KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
           KR G R ++  +S S +  +P    +   ET W ++     R   Y   K  AE  A ++
Sbjct: 223 KRVGARFLL--TSTSEVYGDPLEHPQ--KETYWGNVNPIGER-SCYDEGKRTAETLAMDY 277

Query: 179 AEKHGVDVVAIHPATCLGPLM 199
               GV+V         GP M
Sbjct: 278 HRGAGVEVRIARIFNTYGPRM 298

Length = 436

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 9e-04
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 17/134 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYT-----SINATVFPGSDSSHLFALPGAGDANLRVFE 65
            + VTGA GFIG  + K LL+         ++N         + L  L  +G    +  +
Sbjct: 2   KILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGF--KFVK 59

Query: 66  ADVLDSGAVSRAVEGCK--GVFHVASPC----TLEDPVDPEKELILPAVQGTLNVLEAAK 119
            D+ D  A+ R  +  +   V H+A+      +LE+P       +   + G LN+LE  +
Sbjct: 60  GDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENP----HAYVDSNIVGFLNLLELCR 115

Query: 120 RFGVRRVVVTSSIS 133
            FGV+ +V  SS S
Sbjct: 116 HFGVKHLVYASSSS 129

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 45/215 (20%), Positives = 69/215 (32%), Gaps = 54/215 (25%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
             VTGA+  IG  + + L            N       ++    A   A   N    +AD
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNE------EALAELAAIEALGGNAVAVQAD 54

Query: 68  VLDSGAVSRAVEGCK-------GVFH---VASPCTLEDPVDPEKEL-------ILPAVQG 110
           V D   V   VE           + +   +A P  LE+    +++        +      
Sbjct: 55  VSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEE--LTDEDWDRVLDVNLTGVFLL 112

Query: 111 TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK-- 168
           T   L   K+ G  R+V  SS++ + P PG               Y          SK  
Sbjct: 113 TRAALPHMKKQGGGRIVNISSVAGLRPLPGQ------------AAYA--------ASKAA 152

Query: 169 --TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
              L    A E A  +G+ V A+ P     P++  
Sbjct: 153 LEGLTRSLALELA-PYGIRVNAVAPGLVDTPMLAK 186

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 49/235 (20%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTGA G  G  +++ LL    + + A V     ++ L A  G       V + D    
Sbjct: 1   IAVTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKAATL-ADQGV-----EVRQGDYNQP 54

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
             + +A  G   +F +        P       I    QG  NV +AA+R GV+ +  T  
Sbjct: 55  ELLQKAFAGASKLFIITG------PHYDNTLEI---KQGK-NVADAARRAGVKHIYSTGY 104

Query: 132 ISAIVPN-PGWKGKVFDETSWTD--LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
             A     P    K+  E +     + Y   R   Y       E    E          A
Sbjct: 105 AFAEESAIPLAHVKLAVEYAIRTTGIPYTFLRNGLY------TENFVSEGLPAADTGSGA 158

Query: 189 IHPATCLGPLMQPYLNAS---CAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL 240
           I      GP+  P +  +    A  Q L +   + +  + +          A  L
Sbjct: 159 IVLPAGDGPV--PSVTRNDLGPAAAQLLKEEGHEGKTINLVSNCRWTPDELAAAL 211

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 56/201 (27%), Positives = 82/201 (40%), Gaps = 38/201 (18%)

Query: 12  VCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDSSHLFALPGAGDANLR 62
           V VTG  GF+G+ LV  L+         DN +T     V       H F+ P     N  
Sbjct: 122 VVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVM------HHFSNP-----NFE 170

Query: 63  VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAA 118
           +   DV++   +         ++H+A P +   PV    +P K  I   V GTLN+L  A
Sbjct: 171 LIRHDVVEPILLE-----VDQIYHLACPAS---PVHYKFNPVKT-IKTNVVGTLNMLGLA 221

Query: 119 KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
           KR G R ++  +S S +  +P    +V  ET W ++     R   Y   K  AE    ++
Sbjct: 222 KRVGARFLL--TSTSEVYGDPLQHPQV--ETYWGNVNPIGVR-SCYDEGKRTAETLTMDY 276

Query: 179 AEKHGVDVVAIHPATCLGPLM 199
                V+V         GP M
Sbjct: 277 HRGANVEVRIARIFNTYGPRM 297

Length = 442

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 21/106 (19%)

Query: 229 VPVKDVAKAQVLLFESPAASGRYLCTNGIYQ-FGDFAERVSKL-----------FPEFPV 276
           V VKDV K  +   E+P+ SG +    G  + F D A    K            FPE   
Sbjct: 219 VYVKDVVKVNLFFLENPSVSGIFNVGTGRARSFNDLASATFKALGKEVKIEYIDFPEDLR 278

Query: 277 HRFDGETQPGLIPCKDAAKRLMDLGLV--FTPVEDAVRETVESLKA 320
            ++   T+  +        +L   G    F  +E+ V++ V++  A
Sbjct: 279 GKYQSFTEADI-------SKLRAAGYTKEFHSLEEGVKDYVKNYLA 317

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 11/135 (8%)

Query: 5   AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS------HLFALPGAGD 58
                 T+ VTG  G+IG+  V  LL   Y      V    D+S       +  L G   
Sbjct: 1   MSLMGRTILVTGGAGYIGSHTVLQLLLAGYK---VVVIDNLDNSSEEALRRVKELAGDLG 57

Query: 59  ANLRVFEADVLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLE 116
            NL   + D+ D  A+ +     +   V H A    + + V          + GT+N+LE
Sbjct: 58  DNLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLE 117

Query: 117 AAKRFGVRRVVVTSS 131
              + G +++V +SS
Sbjct: 118 VMAKHGCKKLVFSSS 132

Length = 352

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 12/93 (12%)

Query: 8  EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-----GDANLR 62
          + +T+ +TGA G IG+ LVK +L+     I A +    D   L  L  +         L 
Sbjct: 3  KGKTILITGAGGLIGSALVKAILEAGGIVIAADI----DKEALNELLESLGKEFKSKKLS 58

Query: 63 VFEADVLDSGAVSRA---VEGCKGVFHVASPCT 92
          + E D+ D  ++           G    A  C 
Sbjct: 59 LVELDITDQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 63/304 (20%), Positives = 98/304 (32%), Gaps = 52/304 (17%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTGA GFIG+ +V+ L+   +  +          +      GA     +V   D+ D 
Sbjct: 3   VFVTGATGFIGSAVVRELVAAGHEVVGLARSD--AGAAKLEAAGA-----QVHRGDLEDL 55

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
             + +A      V H+A      D      E+   A++     L        + ++ TS 
Sbjct: 56  DILRKAAAEADAVIHLAFTHDF-DNFAQACEVDRRAIEALGEALRGTG----KPLIYTSG 110

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV-VAIH 190
           I  + P         +E      +          VS    E AA E AE+ GV   V   
Sbjct: 111 IWLLGP-----TGGQEEDEEAPDD--PPTPAARAVS----EAAALELAER-GVRASVVRL 158

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDVAKAQVLLFE 243
           P    G             +  L+  +++     ++G       AV   D A+   L  E
Sbjct: 159 PPVVHGR-------GDHGFVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALE 211

Query: 244 SPAASGRYLCT--NGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLG 301
              A   Y      GI    D AE + +        R         IP ++AA     L 
Sbjct: 212 KGKAGSVYHAVAEEGI-PVKDIAEAIGR--------RLGVPVVS--IPAEEAAAHFGWLA 260

Query: 302 LVFT 305
           +   
Sbjct: 261 MFVA 264

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 62/264 (23%), Positives = 87/264 (32%), Gaps = 36/264 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDA---------- 59
           TV +TGA GF+G +L++ LL  +    +   V   S+   +  L  A  +          
Sbjct: 1   TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLAR 60

Query: 60  -NLRVFEADV------LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTL 112
             + V   D+      L      R  E    + H  +   L + V P  EL    V GT 
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGA---LVNWVYPYSELRGANVLGTR 117

Query: 113 NVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAE 172
            VL  A     + +   S+IS             D+ + T           Y  SK +AE
Sbjct: 118 EVLRLAASGRAKPLHYVSTISVGAAIDL-STVTEDDATVTPPPGLAGG---YAQSKWVAE 173

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGP------LMQPYL-NASCAVLQQLLQGSKDTQEYHW 225
               E A   G+ V  + P   LG            L       L               
Sbjct: 174 LLVRE-ASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPQSPELTEDL 232

Query: 226 LGAVPVKDVAKAQVLLFESPAASG 249
               PV  VA+A V+L   PAAS 
Sbjct: 233 ---TPVDFVARAIVVLSSRPAASA 253

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 38.3 bits (89), Expect = 0.004
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 18/126 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINA-----TVFPGSDSSHLFALPGAGDANLRVFEA 66
           +C+TGA GFI + + + L    +  I +              H F L      +LRV E 
Sbjct: 24  ICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHL-----VDLRVMEN 78

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELIL-PAVQGTLNVLEAAKRFGVRR 125
            +       +  +G   VF++A+       +     +I+      + N+LEAA+  GV+R
Sbjct: 79  CL-------KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKR 131

Query: 126 VVVTSS 131
               SS
Sbjct: 132 FFYASS 137

Length = 370

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	331
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	100.0
PRK05865	854	hypothetical protein; Provisional	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
PLN02778	298	3,5-epimerase/4-reductase	100.0
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	100.0
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.98
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.97
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
PLN02260	668	probable rhamnose biosynthetic enzyme	99.96
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.96
PRK12320	699	hypothetical protein; Provisional	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.95
PLN02503	605	fatty acyl-CoA reductase 2	99.95
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.94
KOG2774	366	consensus NAD dependent epimerase [General functio	99.94
PRK06482	276	short chain dehydrogenase; Provisional	99.94
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.93
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.93
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.93
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.93
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.93
PRK08263	275	short chain dehydrogenase; Provisional	99.92
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK06180	277	short chain dehydrogenase; Provisional	99.92
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.92
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.92
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.92
PRK07775	274	short chain dehydrogenase; Provisional	99.92
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.91
PRK07074	257	short chain dehydrogenase; Provisional	99.91
PRK09135	249	pteridine reductase; Provisional	99.9
PRK06914	280	short chain dehydrogenase; Provisional	99.9
PRK07060	245	short chain dehydrogenase; Provisional	99.9
PRK07067	257	sorbitol dehydrogenase; Provisional	99.9
PRK06182	273	short chain dehydrogenase; Validated	99.9
PRK07806	248	short chain dehydrogenase; Provisional	99.9
PRK05876	275	short chain dehydrogenase; Provisional	99.9
PRK12829	264	short chain dehydrogenase; Provisional	99.9
PRK06194	287	hypothetical protein; Provisional	99.9
PRK12746	254	short chain dehydrogenase; Provisional	99.9
PLN03209	576	translocon at the inner envelope of chloroplast su	99.9
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.9
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.9
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.9
PRK06138	252	short chain dehydrogenase; Provisional	99.89
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK05875	276	short chain dehydrogenase; Provisional	99.89
PRK12827	249	short chain dehydrogenase; Provisional	99.89
PRK07774	250	short chain dehydrogenase; Provisional	99.89
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.89
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.89
PRK06179	270	short chain dehydrogenase; Provisional	99.89
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK12828	239	short chain dehydrogenase; Provisional	99.88
PRK06500	249	short chain dehydrogenase; Provisional	99.88
PRK06128	300	oxidoreductase; Provisional	99.88
PRK06181	263	short chain dehydrogenase; Provisional	99.88
PRK07890	258	short chain dehydrogenase; Provisional	99.88
PRK05993	277	short chain dehydrogenase; Provisional	99.88
PRK08628	258	short chain dehydrogenase; Provisional	99.88
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.88
PRK12939	250	short chain dehydrogenase; Provisional	99.87
PLN02253	280	xanthoxin dehydrogenase	99.87
PRK07024	257	short chain dehydrogenase; Provisional	99.87
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.87
PRK05717	255	oxidoreductase; Validated	99.87
PRK07454	241	short chain dehydrogenase; Provisional	99.87
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.87
PRK09291	257	short chain dehydrogenase; Provisional	99.87
PRK08219	227	short chain dehydrogenase; Provisional	99.87
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.87
PRK07576	264	short chain dehydrogenase; Provisional	99.87
PRK09134	258	short chain dehydrogenase; Provisional	99.87
PRK06701	290	short chain dehydrogenase; Provisional	99.87
PRK06101	240	short chain dehydrogenase; Provisional	99.87
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.87
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.87
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.87
PRK10538	248	malonic semialdehyde reductase; Provisional	99.86
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.86
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.86
PRK08264	238	short chain dehydrogenase; Validated	99.86
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.86
PRK06841	255	short chain dehydrogenase; Provisional	99.86
PRK06123	248	short chain dehydrogenase; Provisional	99.86
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.86
PRK05693	274	short chain dehydrogenase; Provisional	99.86
PRK08017	256	oxidoreductase; Provisional	99.86
PRK07985	294	oxidoreductase; Provisional	99.86
PRK05650	270	short chain dehydrogenase; Provisional	99.86
PRK08267	260	short chain dehydrogenase; Provisional	99.86
PRK08265	261	short chain dehydrogenase; Provisional	99.86
PRK06196	315	oxidoreductase; Provisional	99.86
PRK06523	260	short chain dehydrogenase; Provisional	99.86
PRK07856	252	short chain dehydrogenase; Provisional	99.85
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.85
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK08226	263	short chain dehydrogenase; Provisional	99.85
PRK07814	263	short chain dehydrogenase; Provisional	99.85
PRK08324	681	short chain dehydrogenase; Validated	99.85
PRK06398	258	aldose dehydrogenase; Validated	99.85
PRK09186	256	flagellin modification protein A; Provisional	99.85
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK07035	252	short chain dehydrogenase; Provisional	99.85
PRK07825	273	short chain dehydrogenase; Provisional	99.85
PRK08643	256	acetoin reductase; Validated	99.85
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.85
PRK07478	254	short chain dehydrogenase; Provisional	99.85
PRK06172	253	short chain dehydrogenase; Provisional	99.85
PRK07577	234	short chain dehydrogenase; Provisional	99.85
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.85
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.85
PRK08589	272	short chain dehydrogenase; Validated	99.84
PRK07102	243	short chain dehydrogenase; Provisional	99.84
PRK07063	260	short chain dehydrogenase; Provisional	99.84
PRK06114	254	short chain dehydrogenase; Provisional	99.84
PRK06139	330	short chain dehydrogenase; Provisional	99.84
PRK12937	245	short chain dehydrogenase; Provisional	99.84
PRK06949	258	short chain dehydrogenase; Provisional	99.84
PRK07326	237	short chain dehydrogenase; Provisional	99.84
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.84
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.84
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK12747	252	short chain dehydrogenase; Provisional	99.84
PRK07041	230	short chain dehydrogenase; Provisional	99.84
PRK12743	256	oxidoreductase; Provisional	99.84
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK08251	248	short chain dehydrogenase; Provisional	99.83
PRK06057	255	short chain dehydrogenase; Provisional	99.83
PRK07109	334	short chain dehydrogenase; Provisional	99.83
PRK05866	293	short chain dehydrogenase; Provisional	99.83
PRK12744	257	short chain dehydrogenase; Provisional	99.83
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.83
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.83
PRK07677	252	short chain dehydrogenase; Provisional	99.83
PRK06198	260	short chain dehydrogenase; Provisional	99.83
PRK05872	296	short chain dehydrogenase; Provisional	99.83
PRK06197	306	short chain dehydrogenase; Provisional	99.83
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.82
PRK09242	257	tropinone reductase; Provisional	99.82
PRK12742	237	oxidoreductase; Provisional	99.82
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.82
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.82
PRK05867	253	short chain dehydrogenase; Provisional	99.82
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.82
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.82
PRK07904	253	short chain dehydrogenase; Provisional	99.82
PRK08703	239	short chain dehydrogenase; Provisional	99.81
PRK08278	273	short chain dehydrogenase; Provisional	99.81
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.81
PRK06924	251	short chain dehydrogenase; Provisional	99.81
PRK09072	263	short chain dehydrogenase; Provisional	99.81
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.81
PRK08339	263	short chain dehydrogenase; Provisional	99.81
PRK07069	251	short chain dehydrogenase; Validated	99.81
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.81
PRK06953	222	short chain dehydrogenase; Provisional	99.81
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.81
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.81
PRK05854	313	short chain dehydrogenase; Provisional	99.8
PRK06483	236	dihydromonapterin reductase; Provisional	99.8
PRK07023	243	short chain dehydrogenase; Provisional	99.8
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.8
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.8
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.8
PRK06484	520	short chain dehydrogenase; Validated	99.79
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.79
PRK07832	272	short chain dehydrogenase; Provisional	99.79
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.79
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK07791	286	short chain dehydrogenase; Provisional	99.78
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.78
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.78
PRK07831	262	short chain dehydrogenase; Provisional	99.78
PRK07578	199	short chain dehydrogenase; Provisional	99.78
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PRK07201	657	short chain dehydrogenase; Provisional	99.78
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK07062	265	short chain dehydrogenase; Provisional	99.77
PRK08177	225	short chain dehydrogenase; Provisional	99.77
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.77
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.76
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
COG2910	211	Putative NADH-flavin reductase [General function p	99.76
PRK06940	275	short chain dehydrogenase; Provisional	99.76
PRK06125	259	short chain dehydrogenase; Provisional	99.75
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.75
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK12367	245	short chain dehydrogenase; Provisional	99.75
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.74
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.74
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.73
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK05884	223	short chain dehydrogenase; Provisional	99.72
PRK06484	520	short chain dehydrogenase; Validated	99.72
PRK05855	582	short chain dehydrogenase; Validated	99.72
PRK05599	246	hypothetical protein; Provisional	99.72
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.72
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.71
PLN02780	320	ketoreductase/ oxidoreductase	99.69
PRK08303	305	short chain dehydrogenase; Provisional	99.69
PLN00015	308	protochlorophyllide reductase	99.67
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.67
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.65
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.65
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.64
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.64
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.63
PRK08862	227	short chain dehydrogenase; Provisional	99.61
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.58
KOG0725	270	consensus Reductases with broad range of substrate	99.57
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.57
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.56
KOG1208	314	consensus Dehydrogenases with different specificit	99.56
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.55
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.53
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.53
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.5
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.5
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.49
COG1028	251	FabG Dehydrogenases with different specificities (	99.48
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.47
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.47
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.46
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.42
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.42
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.4
PTZ00325	321	malate dehydrogenase; Provisional	99.31
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.25
PLN00106	323	malate dehydrogenase	99.21
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.19
PRK06720	169	hypothetical protein; Provisional	99.17
PRK08309	177	short chain dehydrogenase; Provisional	99.13
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.97
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.95
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.85
PRK09620	229	hypothetical protein; Provisional	98.75
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.74
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.7
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.7
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.7
PRK05086	312	malate dehydrogenase; Provisional	98.65
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.62
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.59
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.55
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.46
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.44
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.38
PRK14982	340	acyl-ACP reductase; Provisional	98.35
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.19
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.16
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.09
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.07
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.02
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.99
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.98
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	97.97
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.94
COG3268	382	Uncharacterized conserved protein [Function unknow	97.91
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.89
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.8
PRK04148	134	hypothetical protein; Provisional	97.79
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.78
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.76
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.76
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.75
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.75
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.75
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.73
PRK09496	453	trkA potassium transporter peripheral membrane com	97.73
PRK05442	326	malate dehydrogenase; Provisional	97.72
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.7
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.7
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.69
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.67
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.65
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.61
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.56
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.56
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.55
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.54
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.54
PRK09496	453	trkA potassium transporter peripheral membrane com	97.53
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.53
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.53
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.52
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.5
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.47
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.46
PTZ00117	319	malate dehydrogenase; Provisional	97.4
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.4
PRK06223	307	malate dehydrogenase; Reviewed	97.4
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.38
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.38
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.37
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.35
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.33
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.31
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.29
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.25
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.2
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.18
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.17
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.14
PRK08223	287	hypothetical protein; Validated	97.13
PRK10669	558	putative cation:proton antiport protein; Provision	97.1
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.09
PLN02602	350	lactate dehydrogenase	97.09
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.05
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.04
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.03
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.03
PLN02383	344	aspartate semialdehyde dehydrogenase	97.0
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.0
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.0
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.98
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.98
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.94
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.92
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.92
PRK08328	231	hypothetical protein; Provisional	96.92
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.91
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.9
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.9
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.89
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.86
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.86
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.85
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.85
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.85
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.84
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.83
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.8
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.78
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.77
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.74
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.73
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.73
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.72
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.72
PRK07877	722	hypothetical protein; Provisional	96.72
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.72
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.72
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.71
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.68
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.68
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.66
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.64
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.62
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.6
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.59
PRK08655	437	prephenate dehydrogenase; Provisional	96.59
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.57
KOG2018	430	consensus Predicted dinucleotide-utilizing enzyme	96.56
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.55
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.55
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.53
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.53
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.53
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.5
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.47
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.44
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.42
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.37
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.37
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.37
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.36
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.31
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.31
PRK07411	390	hypothetical protein; Validated	96.3
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.29
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.29
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.27
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.27
PRK14851	679	hypothetical protein; Provisional	96.26
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.26
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.25
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.25
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.23
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.22
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.19
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.18
PRK06849	389	hypothetical protein; Provisional	96.16
PRK14852	989	hypothetical protein; Provisional	96.16
PLN00203	519	glutamyl-tRNA reductase	96.16
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.16
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.15
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	96.15
PRK07574	385	formate dehydrogenase; Provisional	96.13
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.13
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.12
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.12
cd01493	425	APPBP1_RUB Ubiquitin activating enzyme (E1) subuni	96.11
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.11
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.1
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.09
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.09
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.08
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.06
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.05
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.04
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.02
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.01
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.0
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.0
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.0
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.0
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	95.99
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	95.97
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.97
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.92
PRK07417	279	arogenate dehydrogenase; Reviewed	95.9
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	95.89
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	95.88
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.86
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.85
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.84
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	95.83
PLN02948	577	phosphoribosylaminoimidazole carboxylase	95.81
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.81
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	95.79
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.79
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	95.78
TIGR00036	266	dapB dihydrodipicolinate reductase.	95.76
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.76
PRK10537	393	voltage-gated potassium channel; Provisional	95.74
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	95.74
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	95.74
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.74
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.73
PRK13304	265	L-aspartate dehydrogenase; Reviewed	95.72
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	95.71
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	95.69
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.68
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.65

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=5.9e-51  Score=341.42  Aligned_cols=314  Identities=47%  Similarity=0.831  Sum_probs=273.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch---hhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH---LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      .+++|+||||+||||++|+++||++|| .|+++.|++.+...   +.++.+... +...+.+|++|++++.++++++|+|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~-~l~l~~aDL~d~~sf~~ai~gcdgV   82 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKE-RLKLFKADLLDEGSFDKAIDGCDGV   82 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcc-cceEEeccccccchHHHHHhCCCEE
Confidence            467999999999999999999999999 99999999887544   555554444 6899999999999999999999999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccC-CCC-CCccccCCCCCChhhhhccC
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPN-PGW-KGKVFDETSWTDLEYCKSRK  161 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~-~~~-~~~~~~E~~~~~~~~~~~~~  161 (331)
                      ||.|.++...... +..+..+..+.|+.|++++|++.+ ++|+||+||++++... +.. .+..++|+.+.++.++....
T Consensus        83 fH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~  161 (327)
T KOG1502|consen   83 FHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK  161 (327)
T ss_pred             EEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH
Confidence            9999988764333 344789999999999999999997 9999999999888765 222 45789999999999988888


Q ss_pred             cchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHh
Q 020110          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL  241 (331)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~  241 (331)
                      .+|..+|..+|+..++++++.+++.+.+-|+.|+||...+..+.....+.++.+|....+.+....||||+|+|.|.+.+
T Consensus       162 ~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a  241 (327)
T KOG1502|consen  162 LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLA  241 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHH
Confidence            89999999999999999999999999999999999998876667778888999997777777777799999999999999


Q ss_pred             hcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCC-CCCccccccchHHHHhhC-CCccCHHHHHHHHHHHHH
Q 020110          242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGET-QPGLIPCKDAAKRLMDLG-LVFTPVEDAVRETVESLK  319 (331)
Q Consensus       242 l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~k~~~lG-~~~~~~~~~l~~~~~~~~  319 (331)
                      ++.+...|+|+|.++..++.|+++.+.+.+|.+++|...... .........+++|++.|| |++++++|++.+++++++
T Consensus       242 ~E~~~a~GRyic~~~~~~~~ei~~~l~~~~P~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~sl~  321 (327)
T KOG1502|consen  242 LEKPSAKGRYICVGEVVSIKEIADILRELFPDYPIPKKNAEEHEGFLTSFKVSSEKLKSLGGFKFRPLEETLSDTVESLR  321 (327)
T ss_pred             HcCcccCceEEEecCcccHHHHHHHHHHhCCCCCCCCCCCccccccccccccccHHHHhcccceecChHHHHHHHHHHHH
Confidence            999999999999999988999999999999988876555444 233444568999998877 888999999999999999


Q ss_pred             HcCCC
Q 020110          320 AKGFL  324 (331)
Q Consensus       320 ~~~~~  324 (331)
                      +.+.+
T Consensus       322 ~~~~l  326 (327)
T KOG1502|consen  322 EKGLL  326 (327)
T ss_pred             HhcCC
Confidence            98865

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.7e-49  Score=349.09  Aligned_cols=313  Identities=42%  Similarity=0.709  Sum_probs=244.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc--hhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      .++|+||||||+||||++++++|+++|+ +|+++.|+.....  .+..+..... +++++.+|+++.+++.++++++|+|
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~d~V   85 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGY-TVKGTVRNPDDPKNTHLRELEGGKE-RLILCKADLQDYEALKAAIDGCDGV   85 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCchhhhHHHHHHhhCCCC-cEEEEecCcCChHHHHHHHhcCCEE
Confidence            4568999999999999999999999999 9999998754321  1112211111 6889999999999999999999999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC-CCccccCCCCCChhhhhccCcc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKW  163 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~-~~~~~~E~~~~~~~~~~~~~~~  163 (331)
                      ||+|+...     .++...++.|+.++.+++++|++.++++|||+||..++|+.+.. +..+++|+++........+.+.
T Consensus        86 ih~A~~~~-----~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~  160 (342)
T PLN02214         86 FHTASPVT-----DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNW  160 (342)
T ss_pred             EEecCCCC-----CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccH
Confidence            99998642     34678899999999999999999999999999997677764432 2245788865433322334568


Q ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhc
Q 020110          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE  243 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~  243 (331)
                      |+.+|..+|++++.++++++++++++||+++|||+..+........+.+...|.....+++.++|||++|+|++++.+++
T Consensus       161 Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~  240 (342)
T PLN02214        161 YCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYE  240 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHh
Confidence            99999999999999988889999999999999998654322222233355566655567778999999999999999998


Q ss_pred             CCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCC-CCCCccccccchHHHHhhCCCccCHHHHHHHHHHHHHHcC
Q 020110          244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGE-TQPGLIPCKDAAKRLMDLGLVFTPVEDAVRETVESLKAKG  322 (331)
Q Consensus       244 ~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~lG~~~~~~~~~l~~~~~~~~~~~  322 (331)
                      ++...|+||+++...++.|+++.+.+.+|..+++..... .........+|++|+++|||+|++++|+|+++++|+++.+
T Consensus       241 ~~~~~g~yn~~~~~~~~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LG~~p~~lee~i~~~~~~~~~~~  320 (342)
T PLN02214        241 APSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFTSTKQSLYDTVKSLQEKG  320 (342)
T ss_pred             CcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHHHHcCCcccCHHHHHHHHHHHHHHcC
Confidence            876667898777789999999999999975544432211 1123334568999997799999999999999999999999


Q ss_pred             CCCc
Q 020110          323 FLGQ  326 (331)
Q Consensus       323 ~~~~  326 (331)
                      .+++
T Consensus       321 ~~~~  324 (342)
T PLN02214        321 HLAP  324 (342)
T ss_pred             CCCC
Confidence            8865

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.5e-50  Score=329.55  Aligned_cols=294  Identities=20%  Similarity=0.216  Sum_probs=243.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC-ccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      |+||||||+||||+|.+.+|++.|+ +|++++.-.. ....+...      ..+++++|+.|.+.+.++++  ++|+|||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~-~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~~~idaViH   73 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGH-EVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEENKIDAVVH   73 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCC-eEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence            4899999999999999999999999 9999976332 22333221      25899999999999999996  4899999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +||...+..+...|..+++.|+.+|.+|+++++++++++|||-|| +++|+.+..  .|++|++++.|.      |+||.
T Consensus        74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSSt-AavYG~p~~--~PI~E~~~~~p~------NPYG~  144 (329)
T COG1087          74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSST-AAVYGEPTT--SPISETSPLAPI------NPYGR  144 (329)
T ss_pred             CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecc-hhhcCCCCC--cccCCCCCCCCC------Ccchh
Confidence            999999988888999999999999999999999999999999555 589998886  899999998877      59999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCC-------CCChhHHHHHHHHcCCCCc---cCc--------CCCCc
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-------YLNASCAVLQQLLQGSKDT---QEY--------HWLGA  228 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~--------~~~~~  228 (331)
                      ||++.|++++++++.+++++++||.+++.|.....       +...+...+.+...|+...   +|+        ..|||
T Consensus       145 sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDY  224 (329)
T COG1087         145 SKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDY  224 (329)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeee
Confidence            99999999999999999999999999999986432       1122223334444444321   332        68999


Q ss_pred             eeHHHHHHHHHHhhcCCCCCc---eEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCCC-CCccccccchHHH-HhhCC
Q 020110          229 VPVKDVAKAQVLLFESPAASG---RYLC-TNGIYQFGDFAERVSKLFPEFPVHRFDGETQ-PGLIPCKDAAKRL-MDLGL  302 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~~~g---~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~k~-~~lG~  302 (331)
                      |||.|+|+|.+.+++.-..+|   +||+ +|..+|+.|+++.+.+.. +.++|....+.+ .+...+..|++|+ +.|||
T Consensus       225 IHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vt-g~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lgw  303 (329)
T COG1087         225 IHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVT-GRDIPVEIAPRRAGDPAILVADSSKARQILGW  303 (329)
T ss_pred             eehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHh-CCcCceeeCCCCCCCCceeEeCHHHHHHHhCC
Confidence            999999999999988654444   5765 577899999999999999 677776655544 6777889999999 88999


Q ss_pred             Cc-c-CHHHHHHHHHHHHHH
Q 020110          303 VF-T-PVEDAVRETVESLKA  320 (331)
Q Consensus       303 ~~-~-~~~~~l~~~~~~~~~  320 (331)
                      +| + ++++.+++..+|.+.
T Consensus       304 ~p~~~~L~~ii~~aw~W~~~  323 (329)
T COG1087         304 QPTYDDLEDIIKDAWDWHQQ  323 (329)
T ss_pred             CcccCCHHHHHHHHHHHhhh
Confidence            99 6 999999999999984

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.2e-50  Score=325.23  Aligned_cols=305  Identities=18%  Similarity=0.202  Sum_probs=256.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCC--CccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPG--SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   84 (331)
                      |++|||||+||||++++++++++.. .+|+.++.-.  .....+..+..  .++..++++|++|.+.+..+++  ++|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~--~~~~~fv~~DI~D~~~v~~~~~~~~~D~V   78 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED--SPRYRFVQGDICDRELVDRLFKEYQPDAV   78 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc--CCCceEEeccccCHHHHHHHHHhcCCCeE
Confidence            4899999999999999999999863 1578877632  11222222222  1289999999999999999998  58999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (331)
                      +|+||-.+++.+-..|...+++|+.||.+|++++++...+ ||+++||. .+||.....+..++|+++.+|..      +
T Consensus        79 vhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTD-EVYG~l~~~~~~FtE~tp~~PsS------P  151 (340)
T COG1088          79 VHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTD-EVYGDLGLDDDAFTETTPYNPSS------P  151 (340)
T ss_pred             EEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccc-cccccccCCCCCcccCCCCCCCC------C
Confidence            9999999999888999999999999999999999999754 89999997 78887765445799999999885      9


Q ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCc--CCCCceeHHHHHHHHHH
Q 020110          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEY--HWLGAVPVKDVAKAQVL  240 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~v~v~D~a~a~~~  240 (331)
                      |+.||..++.+++.|.+.+|++++|.|+++-|||.+.+. ..++.++.+++.|.+++ +|+  +.|||+||+|-|+|+..
T Consensus       152 YSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE-KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~  230 (340)
T COG1088         152 YSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE-KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDL  230 (340)
T ss_pred             cchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch-hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHH
Confidence            999999999999999999999999999999999998765 56788899999999998 655  89999999999999999


Q ss_pred             hhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCCC-----CCCCCCCCCCccccccchHHH-HhhCCCc-cCHHHHHH
Q 020110          241 LFESPAASGRYLCTN-GIYQFGDFAERVSKLFPEFPV-----HRFDGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVR  312 (331)
Q Consensus       241 ~l~~~~~~g~~~~~~-~~~s~~e~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~  312 (331)
                      ++.+...+.+||+++ ...+..|+++.|++.++....     ..+..+.+.-.....+|.+|+ ++|||.| .+|+++|+
T Consensus       231 Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~Glr  310 (340)
T COG1088         231 VLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETGLR  310 (340)
T ss_pred             HHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHHHH
Confidence            999887755897765 458999999999999943221     234444545555677999999 9999999 69999999


Q ss_pred             HHHHHHHHcCCC
Q 020110          313 ETVESLKAKGFL  324 (331)
Q Consensus       313 ~~~~~~~~~~~~  324 (331)
                      ++++||.++..+
T Consensus       311 kTv~WY~~N~~W  322 (340)
T COG1088         311 KTVDWYLDNEWW  322 (340)
T ss_pred             HHHHHHHhchHH
Confidence            999999998765

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.5e-47  Score=336.72  Aligned_cols=311  Identities=41%  Similarity=0.702  Sum_probs=242.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc---CCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA---LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .|+|||||||||||++|+++|+++|+ +|++++|+.........   ...... +++++.+|+++++.+.++++++|+||
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~d~Vi   81 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGY-TVKATVRDPNDPKKTEHLLALDGAKE-RLHLFKANLLEEGSFDSVVDGCEGVF   81 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCC-EEEEEEcCCCchhhHHHHHhccCCCC-ceEEEeccccCcchHHHHHcCCCEEE
Confidence            47999999999999999999999999 99999987654322111   111112 78899999999999999999999999


Q ss_pred             EcccCCCCCCCCCch-hhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCcccee-ccCCC-CCCccccCCCCCChhhhhccC
Q 020110           86 HVASPCTLEDPVDPE-KELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAI-VPNPG-WKGKVFDETSWTDLEYCKSRK  161 (331)
Q Consensus        86 h~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~-~~~~~-~~~~~~~E~~~~~~~~~~~~~  161 (331)
                      |+|+....  ...++ ...+++|+.++.+++++|++. ++++|||+||++++ |+... .+..+++|+.+..|.++....
T Consensus        82 h~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~  159 (322)
T PLN02662         82 HTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESK  159 (322)
T ss_pred             EeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhccc
Confidence            99987542  12234 378899999999999999887 89999999997543 43221 123568888777775544444


Q ss_pred             cchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHh
Q 020110          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL  241 (331)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~  241 (331)
                      +.|+.+|..+|++++.++++++++++++||+++|||...+........+.++..|.+ ..+++.++|||++|+|++++.+
T Consensus       160 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~a~~~~  238 (322)
T PLN02662        160 LWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQA  238 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cCCCCCcCeEEHHHHHHHHHHH
Confidence            689999999999999998889999999999999999865433334445566666543 3566789999999999999999


Q ss_pred             hcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHHHhhCCCccCHHHHHHHHHHHHHHc
Q 020110          242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPVEDAVRETVESLKAK  321 (331)
Q Consensus       242 l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~l~~~~~~~~~~  321 (331)
                      +..+...|.|++++..+|++|+++.+.+.+|..+++..............+|++|++.|||++++++++|+++++|++++
T Consensus       239 ~~~~~~~~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~~~~~~~~l~~~~~~~~~~  318 (322)
T PLN02662        239 FEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEFIPLEVSLKDTVESLKEK  318 (322)
T ss_pred             hcCcCcCCcEEEeCCCCCHHHHHHHHHHHCCCCCCCCCCCCccccccccccChHHHHHhCCccccHHHHHHHHHHHHHHc
Confidence            98776567787778889999999999999865444433222222345567999999779999899999999999999998


Q ss_pred             CCC
Q 020110          322 GFL  324 (331)
Q Consensus       322 ~~~  324 (331)
                      +++
T Consensus       319 ~~~  321 (322)
T PLN02662        319 GFL  321 (322)
T ss_pred             CCC
Confidence            875

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.5e-47  Score=339.13  Aligned_cols=304  Identities=14%  Similarity=0.097  Sum_probs=233.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch-hhcCC----CCCCCcEEEEEccCCCchHHHHHhcCcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALP----GAGDANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      +||+|||||||||||++|+++|+++|+ +|++++|....... .....    .....+++++.+|++|.+.+.++++++|
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d   92 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQ-TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD   92 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence            468999999999999999999999999 99999885432211 11110    0011168899999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      +|||+|+.........++...+++|+.++.+++++|++.++++|||+||+ .+|+...  +.+..|+++..|.      +
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~-~vyg~~~--~~~~~e~~~~~p~------~  163 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASS-STYGDHP--DLPKIEERIGRPL------S  163 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeech-HhhCCCC--CCCCCCCCCCCCC------C
Confidence            99999997654334455677899999999999999999999999999997 5555432  2456676655554      4


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHH
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAK  236 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~  236 (331)
                      +|+.+|.++|.+++.|.++++++++++||+++|||+..+.   ...+..++.++..+.++. +  |.+.++|+|++|+|+
T Consensus       164 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~  243 (348)
T PRK15181        164 PYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243 (348)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHH
Confidence            8999999999999999888899999999999999986432   134567777888887766 4  447899999999999


Q ss_pred             HHHHhhcCCC---CCceEEEe-ccccCHHHHHHHHHHhCCCCCC------CCCCCCCCCCccccccchHHH-HhhCCCc-
Q 020110          237 AQVLLFESPA---ASGRYLCT-NGIYQFGDFAERVSKLFPEFPV------HRFDGETQPGLIPCKDAAKRL-MDLGLVF-  304 (331)
Q Consensus       237 a~~~~l~~~~---~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~k~-~~lG~~~-  304 (331)
                      +++.++....   ..++||++ ++++|++|+++.+.+.++....      +...............|++|+ +.|||+| 
T Consensus       244 a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P~  323 (348)
T PRK15181        244 ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPE  323 (348)
T ss_pred             HHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCCCC
Confidence            9988775432   34578764 5679999999999998852110      111111112333567899999 7799999 


Q ss_pred             cCHHHHHHHHHHHHHHc
Q 020110          305 TPVEDAVRETVESLKAK  321 (331)
Q Consensus       305 ~~~~~~l~~~~~~~~~~  321 (331)
                      .+++|+|+++++|++.+
T Consensus       324 ~sl~egl~~~~~w~~~~  340 (348)
T PRK15181        324 FDIKEGLKQTLKWYIDK  340 (348)
T ss_pred             CCHHHHHHHHHHHHHHh
Confidence            59999999999999765

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.1e-46  Score=331.04  Aligned_cols=312  Identities=39%  Similarity=0.702  Sum_probs=241.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC---CCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP---GAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .++|||||||||||++++++|++.|+ +|+++.|+...........   .... +++++.+|+++++.+.++++++|+||
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~d~vi   82 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRKKTEHLLALDGAKE-RLKLFKADLLEESSFEQAIEGCDAVF   82 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchHHHHHHHhccCCCC-ceEEEecCCCCcchHHHHHhCCCEEE
Confidence            47999999999999999999999999 9999998765433322211   1112 68999999999999999999999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCcccee-ccCCCC-CCccccCCCCCChhhhhccCc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAI-VPNPGW-KGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~-~~~~~~-~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      |+|+..... ..++....++.|+.++.+++++|++. +++|||++||.+++ |+.+.. .+.+++|+++..|..+..+.+
T Consensus        83 h~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  161 (322)
T PLN02986         83 HTASPVFFT-VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN  161 (322)
T ss_pred             EeCCCcCCC-CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence            999975431 12223457899999999999999886 78999999998654 333221 235678888766654334456


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhh
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF  242 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l  242 (331)
                      .|+.+|..+|.+++.|.++++++++++||+++|||...+.......++.++..+... ++++.++|||++|+|++++.++
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~v~v~Dva~a~~~al  240 (322)
T PLN02986        162 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL-FNNRFYRFVDVRDVALAHIKAL  240 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC-CCCcCcceeEHHHHHHHHHHHh
Confidence            899999999999999998899999999999999998654333344556666666543 4567789999999999999999


Q ss_pred             cCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHHHhhCCCccCHHHHHHHHHHHHHHcC
Q 020110          243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPVEDAVRETVESLKAKG  322 (331)
Q Consensus       243 ~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~l~~~~~~~~~~~  322 (331)
                      +.+...++|+++++.+|+.|+++.+.+.+|...++..............+|++|++.|||+|++++|+|+++++|+++.+
T Consensus       241 ~~~~~~~~yni~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lg~~~~~l~e~~~~~~~~~~~~~  320 (322)
T PLN02986        241 ETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEMNEMICKVCVEKVKNLGVEFTPMKSSLRDTILSLKEKC  320 (322)
T ss_pred             cCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccccccCCccCHHHHHHcCCcccCHHHHHHHHHHHHHHcC
Confidence            98766678988888899999999999999765444321111111111247899997899999999999999999999987


Q ss_pred             CC
Q 020110          323 FL  324 (331)
Q Consensus       323 ~~  324 (331)
                      .+
T Consensus       321 ~~  322 (322)
T PLN02986        321 LL  322 (322)
T ss_pred             CC
Confidence            64

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=3.7e-46  Score=328.14  Aligned_cols=312  Identities=38%  Similarity=0.659  Sum_probs=241.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc---CCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA---LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      +|+||||||+||||++++++|+++|+ +|+++.|+.........   ...... +++++.+|+++.+++.++++++|+||
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~d~vi   82 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDRKKTDHLLALDGAKE-RLKLFKADLLDEGSFELAIDGCETVF   82 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcchhhHHHHHhccCCCC-ceEEEeCCCCCchHHHHHHcCCCEEE
Confidence            57999999999999999999999999 99988887654322211   111112 68899999999999999999999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceeccCCC--CCCccccCCCCCChhhhhccCc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPG--WKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~--~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      |+|+........+++...+++|+.++.+++++|.+. +.++||++||..++++...  .+..+++|+++..|.....+.+
T Consensus        83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  162 (325)
T PLN02989         83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ  162 (325)
T ss_pred             EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence            999975443334445778999999999999999875 5789999999866665321  1235688998877754333456


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhh
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF  242 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l  242 (331)
                      +|+.+|..+|++++.++++++++++++||+++|||+..+.......++.++..++.. .+.+.++|+|++|+|++++.++
T Consensus       163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~~~~~r~~i~v~Dva~a~~~~l  241 (325)
T PLN02989        163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-FNTTHHRFVDVRDVALAHVKAL  241 (325)
T ss_pred             chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-CCCcCcCeeEHHHHHHHHHHHh
Confidence            899999999999999988889999999999999998765333444556666666543 3345689999999999999999


Q ss_pred             cCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCC-CCccccccchHHHHhhCCCc-cCHHHHHHHHHHHHHH
Q 020110          243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQ-PGLIPCKDAAKRLMDLGLVF-TPVEDAVRETVESLKA  320 (331)
Q Consensus       243 ~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~k~~~lG~~~-~~~~~~l~~~~~~~~~  320 (331)
                      +.+...++||++++.+|++|+++.+.+.+|...++....+.. ........|++|+++|||+| ++++++|+++++|++.
T Consensus       242 ~~~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~~~  321 (325)
T PLN02989        242 ETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKE  321 (325)
T ss_pred             cCcccCceEEEecCCCCHHHHHHHHHHHCCCCCCCCCCCCcccccccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Confidence            876656789888788999999999999997543321111110 11235578899996799999 6999999999999988


Q ss_pred             cCC
Q 020110          321 KGF  323 (331)
Q Consensus       321 ~~~  323 (331)
                      .+.
T Consensus       322 ~~~  324 (325)
T PLN02989        322 KCL  324 (325)
T ss_pred             hCC
Confidence            764

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=3.5e-45  Score=324.96  Aligned_cols=311  Identities=37%  Similarity=0.659  Sum_probs=230.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC---CCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL---PGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .|+|||||||||||++|+++|+++|+ +|+++.|+..........   ..... +++++.+|+++.+.+.++++++|+||
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~Dl~d~~~~~~~~~~~d~Vi   82 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLERGY-TVRATVRDPANVKKVKHLLDLPGATT-RLTLWKADLAVEGSFDDAIRGCTGVF   82 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHCCC-EEEEEEcCcchhHHHHHHHhccCCCC-ceEEEEecCCChhhHHHHHhCCCEEE
Confidence            46999999999999999999999999 999999876543332221   11111 58899999999999999999999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCCCCcc-ccCCCCCChhh---hhcc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKV-FDETSWTDLEY---CKSR  160 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~-~~E~~~~~~~~---~~~~  160 (331)
                      |+|+..... ..++....+++|+.++.+++++|++.+ +++|||+||.+++++....  .+ ++|+.+.....   ...+
T Consensus        83 H~A~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~--~~~~~E~~~~~~~~~~~~~~~  159 (351)
T PLN02650         83 HVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQ--KPVYDEDCWSDLDFCRRKKMT  159 (351)
T ss_pred             EeCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCC--CCccCcccCCchhhhhccccc
Confidence            999865421 122234789999999999999999876 7899999998666543321  23 56664322110   1112


Q ss_pred             CcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHH--HHcCCCCccC-cCCCCceeHHHHHHH
Q 020110          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQ--LLQGSKDTQE-YHWLGAVPVKDVAKA  237 (331)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~v~v~D~a~a  237 (331)
                      .++|+.+|..+|.+++.|+++++++++++||+++|||+.......  .++..  ...+.....+ .+.++|+|++|+|++
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a  237 (351)
T PLN02650        160 GWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPP--SLITALSLITGNEAHYSIIKQGQFVHLDDLCNA  237 (351)
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCc--cHHHHHHHhcCCccccCcCCCcceeeHHHHHHH
Confidence            347999999999999999988999999999999999986542211  11221  1223322222 245899999999999


Q ss_pred             HHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHHHhhCCCcc-CHHHHHHHHHH
Q 020110          238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFT-PVEDAVRETVE  316 (331)
Q Consensus       238 ~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~-~~~~~l~~~~~  316 (331)
                      ++.+++.+...+.|+++++.+|+.|+++.|.+.++...++...............|++|+++|||+|+ +++++|+++++
T Consensus       238 ~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~egl~~~i~  317 (351)
T PLN02650        238 HIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDLKSVEFSSKKLTDLGFTFKYSLEDMFDGAIE  317 (351)
T ss_pred             HHHHhcCcCcCceEEecCCCcCHHHHHHHHHHhCcccCCCCCCCCcCcccccccCChHHHHHhCCCCCCCHHHHHHHHHH
Confidence            99999876656688888888999999999999886544443322212233345568888888999995 99999999999


Q ss_pred             HHHHcCCCCc
Q 020110          317 SLKAKGFLGQ  326 (331)
Q Consensus       317 ~~~~~~~~~~  326 (331)
                      |+++.+.+++
T Consensus       318 ~~~~~~~~~~  327 (351)
T PLN02650        318 TCREKGLIPL  327 (351)
T ss_pred             HHHHcCCCCc
Confidence            9999988754

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=3.8e-45  Score=323.25  Aligned_cols=320  Identities=35%  Similarity=0.570  Sum_probs=234.1

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh---cCCCCCCCcEEEEEccCCCchHHHHH
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF---ALPGAGDANLRVFEADVLDSGAVSRA   77 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~   77 (331)
                      |+......+|+||||||+||||++|+++|+++|+ +|+++.|+........   .+.. .+ +++++.+|++|.+++.++
T Consensus         1 ~~~~~~~~~~~vlItG~~GfIG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~d~~~~~~~   77 (338)
T PLN00198          1 MATLTPTGKKTACVIGGTGFLASLLIKLLLQKGY-AVNTTVRDPENQKKIAHLRALQE-LG-DLKIFGADLTDEESFEAP   77 (338)
T ss_pred             CCcccCCCCCeEEEECCchHHHHHHHHHHHHCCC-EEEEEECCCCCHHHHHHHHhcCC-CC-ceEEEEcCCCChHHHHHH
Confidence            5555556678999999999999999999999999 9998888764432211   1111 11 588999999999999999


Q ss_pred             hcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceeccCCCC-CCccccCCCCCChh
Q 020110           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLE  155 (331)
Q Consensus        78 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~-~~~~~~E~~~~~~~  155 (331)
                      ++++|+|||+|+.... ...+.....+++|+.++.++++++++. ++++||++||..+++..... .+.+++|+.+....
T Consensus        78 ~~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~  156 (338)
T PLN00198         78 IAGCDLVFHVATPVNF-ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVE  156 (338)
T ss_pred             HhcCCEEEEeCCCCcc-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchh
Confidence            9999999999986432 112222356799999999999999876 58999999998555433211 12456665422110


Q ss_pred             ---hhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC-------cC
Q 020110          156 ---YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QE-------YH  224 (331)
Q Consensus       156 ---~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~  224 (331)
                         ....+.++|+.+|..+|.+++.|+++++++++++||+++|||+...........+.++..+.... .+       ++
T Consensus       157 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  236 (338)
T PLN00198        157 FLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSG  236 (338)
T ss_pred             hhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccC
Confidence               01123457999999999999999988999999999999999986432222222344555565443 22       12


Q ss_pred             CCCceeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHHHhhCCCc
Q 020110          225 WLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVF  304 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~  304 (331)
                      .++|+||+|+|++++.+++.....+.|++++...|+.|+++.+.+.++...++...... .......+|++|++++||+|
T Consensus       237 ~~~~i~V~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~k~~~~G~~p  315 (338)
T PLN00198        237 SISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDFGDF-PSKAKLIISSEKLISEGFSF  315 (338)
T ss_pred             CcceeEHHHHHHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCCCCCcccccc-CCCCccccChHHHHhCCcee
Confidence            47999999999999999987655567888888899999999999998654433222211 12234568999996579999


Q ss_pred             -cCHHHHHHHHHHHHHHcCCCC
Q 020110          305 -TPVEDAVRETVESLKAKGFLG  325 (331)
Q Consensus       305 -~~~~~~l~~~~~~~~~~~~~~  325 (331)
                       .+++++|+++++|+++++++.
T Consensus       316 ~~~l~~gi~~~~~~~~~~~~~~  337 (338)
T PLN00198        316 EYGIEEIYDQTVEYFKAKGLLK  337 (338)
T ss_pred             cCcHHHHHHHHHHHHHHcCCCC
Confidence             599999999999999988653

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=4.1e-44  Score=318.94  Aligned_cols=305  Identities=19%  Similarity=0.205  Sum_probs=229.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEE-EEecCCCccchhhcCCCC-CCCcEEEEEccCCCchHHHHHhcC--ccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSIN-ATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~-~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~--~d~v   84 (331)
                      ||+|||||||||||+++++.|+++|+ +|+ +.+|.... ......... ...+++++.+|++|.+++.+++++  +|+|
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~-~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V   78 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETS-DAVVVVDKLTYA-GNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV   78 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCC-CEEEEEecCccc-cchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence            57999999999999999999999998 644 44443221 111111100 111578899999999999998874  8999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHh---------CCCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR---------FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~---------~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      ||+||........+.+...+++|+.++.+++++|++         .++++|||+||. .+|+.......+++|+++..|.
T Consensus        79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~-~vyg~~~~~~~~~~E~~~~~p~  157 (355)
T PRK10217         79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTD-EVYGDLHSTDDFFTETTPYAPS  157 (355)
T ss_pred             EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecch-hhcCCCCCCCCCcCCCCCCCCC
Confidence            999997654333445688999999999999999976         256799999997 4565433223568888766654


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeHH
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVK  232 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~  232 (331)
                            +.|+.+|..+|.+++.++++.+++++++||+++|||+..+. ..+..++.+...+.++.   .+++.++|+|++
T Consensus       158 ------s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~  230 (355)
T PRK10217        158 ------SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-KLIPLMILNALAGKPLPVYGNGQQIRDWLYVE  230 (355)
T ss_pred             ------ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHH
Confidence                  48999999999999999888999999999999999986432 34556677777776654   355799999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCC----CCCCC--------CCCCCCCCccccccchHHH-H
Q 020110          233 DVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPE----FPVHR--------FDGETQPGLIPCKDAAKRL-M  298 (331)
Q Consensus       233 D~a~a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~----~~~~~--------~~~~~~~~~~~~~~~~~k~-~  298 (331)
                      |+|+++..+++....+++||++ ++++|++|+++.+++.++.    .+.+.        ..............|++|+ +
T Consensus       231 D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  310 (355)
T PRK10217        231 DHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIAR  310 (355)
T ss_pred             HHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHH
Confidence            9999999999876555688775 5678999999999998742    11100        0001111233457899999 8


Q ss_pred             hhCCCc-cCHHHHHHHHHHHHHHcCC
Q 020110          299 DLGLVF-TPVEDAVRETVESLKAKGF  323 (331)
Q Consensus       299 ~lG~~~-~~~~~~l~~~~~~~~~~~~  323 (331)
                      +|||+| ++++|+|+++++|++.+..
T Consensus       311 ~lg~~p~~~l~e~l~~~~~~~~~~~~  336 (355)
T PRK10217        311 ELGWLPQETFESGMRKTVQWYLANES  336 (355)
T ss_pred             hcCCCCcCcHHHHHHHHHHHHHhCHH
Confidence            899999 6999999999999988754

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.3e-43  Score=315.07  Aligned_cols=317  Identities=35%  Similarity=0.590  Sum_probs=225.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.|+||||||+||||++++++|+++|+ +|++++|+............... +++++.+|+.+.+++.++++++|+|||+
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   86 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKSLHLLSKWKEGD-RLRLFRADLQEEGSFDEAVKGCDGVFHV   86 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhhccCC-eEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence            456999999999999999999999999 99999887544332221111112 6889999999999999999999999999


Q ss_pred             ccCCCCCC--CCCchhh-----hhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCC--CCccccCCCCCChhh-
Q 020110           88 ASPCTLED--PVDPEKE-----LILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLEY-  156 (331)
Q Consensus        88 a~~~~~~~--~~~~~~~-----~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~--~~~~~~E~~~~~~~~-  156 (331)
                      |+......  ...++..     .++.|+.++.+++++|++.+ +++||++||.++++..+..  ...+++|+.+..... 
T Consensus        87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~  166 (353)
T PLN02896         87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV  166 (353)
T ss_pred             CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence            99765422  1223333     34455699999999998874 8899999998544322211  113567763321110 


Q ss_pred             --hhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCcc----Cc----CCC
Q 020110          157 --CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ----EY----HWL  226 (331)
Q Consensus       157 --~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~  226 (331)
                        ...+..+|+.+|.++|++++.|++.++++++++||+++|||+...........+.....|.....    +.    ..+
T Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCce
Confidence              11233479999999999999999889999999999999999865432222222222223432211    11    246


Q ss_pred             CceeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHHHhhCCCc-c
Q 020110          227 GAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVF-T  305 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~-~  305 (331)
                      +|||++|+|++++.++..+...+.|++++.++++.|+++.+.+.++...................+|++++++|||+| .
T Consensus       247 dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lGw~p~~  326 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGSIPSEISSKKLRDLGFEYKY  326 (353)
T ss_pred             eEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCCCCccccccccccCccccccCHHHHHHcCCCccC
Confidence            999999999999999987655567888888899999999999998643222111111111112356888887799999 5


Q ss_pred             CHHHHHHHHHHHHHHcCCCCc
Q 020110          306 PVEDAVRETVESLKAKGFLGQ  326 (331)
Q Consensus       306 ~~~~~l~~~~~~~~~~~~~~~  326 (331)
                      +++++|+++++|++.++.+++
T Consensus       327 ~l~~~i~~~~~~~~~~~~~~~  347 (353)
T PLN02896        327 GIEEIIDQTIDCCVDHGFLPQ  347 (353)
T ss_pred             CHHHHHHHHHHHHHHCCCCCc
Confidence            999999999999999988754

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=1e-43  Score=319.37  Aligned_cols=308  Identities=17%  Similarity=0.193  Sum_probs=225.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCC--CCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPG--AGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      +.|+|||||||||||++|+++|+++ |+ +|++++|+......+.....  ... +++++.+|+.|.+.+.++++++|+|
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~-~V~~l~r~~~~~~~l~~~~~~~~~~-~~~~~~~Dl~d~~~l~~~~~~~d~V   90 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPH-KVLALDVYNDKIKHLLEPDTVPWSG-RIQFHRINIKHDSRLEGLIKMADLT   90 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCC-EEEEEecCchhhhhhhccccccCCC-CeEEEEcCCCChHHHHHHhhcCCEE
Confidence            4568999999999999999999998 58 99999887544333222110  112 6899999999999999999999999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChh---------
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE---------  155 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~---------  155 (331)
                      ||+|+.........++.+.+..|+.++.+++++|++.+ ++|||+||. .+|+....  .+++|+.+..+.         
T Consensus        91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~-~vYg~~~~--~~~~e~~p~~~~~~~~~~~e~  166 (386)
T PLN02427         91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTC-EVYGKTIG--SFLPKDHPLRQDPAFYVLKED  166 (386)
T ss_pred             EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeee-eeeCCCcC--CCCCccccccccccccccccc
Confidence            99999765433334456677899999999999999887 899999997 45654321  233343332110         


Q ss_pred             -------hhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCC---------C-CChhHHHHHHHHcCCC
Q 020110          156 -------YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP---------Y-LNASCAVLQQLLQGSK  218 (331)
Q Consensus       156 -------~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~---------~-~~~~~~~~~~~~~~~~  218 (331)
                             ....+.+.|+.+|..+|+++..+++.++++++++||+++|||+...         . ...+..++.++..+.+
T Consensus       167 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  246 (386)
T PLN02427        167 ESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREP  246 (386)
T ss_pred             ccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCC
Confidence                   0011235799999999999999888889999999999999997531         0 1123344566677776


Q ss_pred             Cc-c--CcCCCCceeHHHHHHHHHHhhcCCC-CCc-eEEEec--cccCHHHHHHHHHHhCCCCCC-CC---C---CCCC-
Q 020110          219 DT-Q--EYHWLGAVPVKDVAKAQVLLFESPA-ASG-RYLCTN--GIYQFGDFAERVSKLFPEFPV-HR---F---DGET-  283 (331)
Q Consensus       219 ~~-~--~~~~~~~v~v~D~a~a~~~~l~~~~-~~g-~~~~~~--~~~s~~e~~~~i~~~~~~~~~-~~---~---~~~~-  283 (331)
                      +. .  +++.++|||++|+|++++.++++.. ..| +||+++  +.+|+.|+++.+.+.++.... +.   .   .... 
T Consensus       247 ~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~  326 (386)
T PLN02427        247 LKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKE  326 (386)
T ss_pred             eEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCccc
Confidence            54 3  3477999999999999999998753 334 787765  379999999999999853211 10   0   0000 


Q ss_pred             -----CCCccccccchHHH-HhhCCCc-cCHHHHHHHHHHHHHHc
Q 020110          284 -----QPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVESLKAK  321 (331)
Q Consensus       284 -----~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~~~~  321 (331)
                           .........|.+|+ +.|||+| ++++++|+++++|++..
T Consensus       327 ~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~  371 (386)
T PLN02427        327 FYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKT  371 (386)
T ss_pred             ccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHH
Confidence                 01233456799999 7799999 69999999999999875

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=8.6e-44  Score=315.57  Aligned_cols=305  Identities=17%  Similarity=0.270  Sum_probs=228.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCC-CchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-DSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~vih   86 (331)
                      ||+|||||||||||++|+++|++. |+ +|++++|+......+..    .. +++++.+|++ +.+.+.++++++|+|||
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~-~V~~~~r~~~~~~~~~~----~~-~~~~~~~Dl~~~~~~~~~~~~~~d~ViH   74 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDW-EVYGMDMQTDRLGDLVN----HP-RMHFFEGDITINKEWIEYHVKKCDVILP   74 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCC-eEEEEeCcHHHHHHhcc----CC-CeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence            568999999999999999999987 68 99999886532222211    11 6899999998 66778888899999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCCh-hhhhccCcchh
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL-EYCKSRKKWYP  165 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~-~~~~~~~~~y~  165 (331)
                      +|+.........++...+++|+.++.+++++|++.+ ++|||+||+ .+|+....  .+++|++.... .....+.+.|+
T Consensus        75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~-~vyg~~~~--~~~~ee~~~~~~~~~~~p~~~Y~  150 (347)
T PRK11908         75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTS-EVYGMCPD--EEFDPEASPLVYGPINKPRWIYA  150 (347)
T ss_pred             CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecc-eeeccCCC--cCcCccccccccCcCCCccchHH
Confidence            999765434455678889999999999999999988 799999998 45554332  45666653210 00012335799


Q ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCC-------CCChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHH
Q 020110          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-------YLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVA  235 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a  235 (331)
                      .+|..+|++++.++++++++++++||+++|||+..+       ....+..++.++..|.++.   .+++.++|||++|++
T Consensus       151 ~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a  230 (347)
T PRK11908        151 CSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGI  230 (347)
T ss_pred             HHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHH
Confidence            999999999999988899999999999999998532       1234567777888887755   245889999999999


Q ss_pred             HHHHHhhcCCC--C-CceEEEec-c-ccCHHHHHHHHHHhCCCCCCC--------CCC-CCC------CCCccccccchH
Q 020110          236 KAQVLLFESPA--A-SGRYLCTN-G-IYQFGDFAERVSKLFPEFPVH--------RFD-GET------QPGLIPCKDAAK  295 (331)
Q Consensus       236 ~a~~~~l~~~~--~-~g~~~~~~-~-~~s~~e~~~~i~~~~~~~~~~--------~~~-~~~------~~~~~~~~~~~~  295 (331)
                      +++..+++++.  . +++||+++ . .+|++|+++.|.+.++..+-.        ... ...      .........|++
T Consensus       231 ~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  310 (347)
T PRK11908        231 DALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKID  310 (347)
T ss_pred             HHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccCChH
Confidence            99999998753  2 34787765 3 599999999999887422110        000 000      011224456788


Q ss_pred             HH-HhhCCCc-cCHHHHHHHHHHHHHHcCC
Q 020110          296 RL-MDLGLVF-TPVEDAVRETVESLKAKGF  323 (331)
Q Consensus       296 k~-~~lG~~~-~~~~~~l~~~~~~~~~~~~  323 (331)
                      |+ +.|||+| ++++++++++++|++++..
T Consensus       311 k~~~~lGw~p~~~l~~~l~~~~~~~~~~~~  340 (347)
T PRK11908        311 NTMQELGWAPKTTMDDALRRIFEAYRGHVA  340 (347)
T ss_pred             HHHHHcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            99 8899999 5999999999999987654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1e-43  Score=315.17  Aligned_cols=303  Identities=21%  Similarity=0.170  Sum_probs=233.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vih   86 (331)
                      +|+||||||+||||+++++.|+++|+ +|++++|+............... +++++.+|+++.+++.+++++  +|+|||
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~d~vih   81 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAK-KIEDHFGDIRDAAKLRKAIAEFKPEIVFH   81 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcC-CceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence            47999999999999999999999999 99999987654332211111111 577899999999999998875  699999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      +|+.........++...+++|+.++.+++++++..+ +++||++||+ .+|+.... ..+++|+++..|.      ++|+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~-~vyg~~~~-~~~~~e~~~~~p~------~~Y~  153 (349)
T TIGR02622        82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSD-KCYRNDEW-VWGYRETDPLGGH------DPYS  153 (349)
T ss_pred             CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEech-hhhCCCCC-CCCCccCCCCCCC------Ccch
Confidence            999765544555678899999999999999998876 7899999997 45554322 2457777765554      4899


Q ss_pred             HHHHHHHHHHHHHHHHc-------CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CcCCCCceeHHHHHH
Q 020110          166 VSKTLAEKAAWEFAEKH-------GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAK  236 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~-------~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~v~D~a~  236 (331)
                      .+|..+|.+++.+++++       +++++++||+++|||+.......+..++..+..|.++..  +++.++|+|++|+|+
T Consensus       154 ~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~  233 (349)
T TIGR02622       154 SSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLS  233 (349)
T ss_pred             hHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHH
Confidence            99999999999887654       899999999999999753222445677788888877663  558999999999999


Q ss_pred             HHHHhhcCC-----CCCceEEEec---cccCHHHHHHHHHHhCCCCCCCCCCC---CCCCCccccccchHHH-HhhCCCc
Q 020110          237 AQVLLFESP-----AASGRYLCTN---GIYQFGDFAERVSKLFPEFPVHRFDG---ETQPGLIPCKDAAKRL-MDLGLVF  304 (331)
Q Consensus       237 a~~~~l~~~-----~~~g~~~~~~---~~~s~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~k~-~~lG~~~  304 (331)
                      +++.+++..     ..++.||+++   .+.++.|+++.+.+.++..++.....   ...........|++|+ +.|||+|
T Consensus       234 a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p  313 (349)
T TIGR02622       234 GYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTLLGWHP  313 (349)
T ss_pred             HHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHHHhCCCC
Confidence            999877642     2245898764   57999999999999875543222111   1112334567899999 7799999


Q ss_pred             -cCHHHHHHHHHHHHHHc
Q 020110          305 -TPVEDAVRETVESLKAK  321 (331)
Q Consensus       305 -~~~~~~l~~~~~~~~~~  321 (331)
                       .+++++|+++++|+++.
T Consensus       314 ~~~l~~gi~~~i~w~~~~  331 (349)
T TIGR02622       314 RWGLEEAVSRTVDWYKAW  331 (349)
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence             59999999999999865

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.9e-43  Score=318.71  Aligned_cols=300  Identities=21%  Similarity=0.235  Sum_probs=226.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      .|+|||||||||||++|+++|+++|+ +|++++|..... ........ .. +++++.+|+.+.     .+.++|+|||+
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~-~V~~ldr~~~~~~~~~~~~~~-~~-~~~~~~~Di~~~-----~~~~~D~ViHl  191 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGD-EVIVIDNFFTGRKENLVHLFG-NP-RFELIRHDVVEP-----ILLEVDQIYHL  191 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCCCccHhHhhhhcc-CC-ceEEEECccccc-----cccCCCEEEEC
Confidence            46899999999999999999999999 999998753221 11111111 11 678889999764     24679999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |+......+..++...++.|+.++.+|+++|++.+. +|||+||+ .+|+....  .+.+|+.+... .+..+.+.|+.+
T Consensus       192 Aa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~-~VYg~~~~--~p~~E~~~~~~-~p~~p~s~Yg~S  266 (436)
T PLN02166        192 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTS-EVYGDPLE--HPQKETYWGNV-NPIGERSCYDEG  266 (436)
T ss_pred             ceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcH-HHhCCCCC--CCCCccccccC-CCCCCCCchHHH
Confidence            997654344456788999999999999999999885 89999997 56665432  46777642211 011123589999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC-CChhHHHHHHHHcCCCCc-cCc--CCCCceeHHHHHHHHHHhhc
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDT-QEY--HWLGAVPVKDVAKAQVLLFE  243 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~~--~~~~~v~v~D~a~a~~~~l~  243 (331)
                      |..+|++++.+++.++++++++||+++|||+.... ...+..++.++..+.++. +++  +.++|+|++|+++++..+++
T Consensus       267 K~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~  346 (436)
T PLN02166        267 KRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALME  346 (436)
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence            99999999999988899999999999999986422 234567788888887765 444  68999999999999999987


Q ss_pred             CCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHH-HhhCCCc-cCHHHHHHHHHHHHHH
Q 020110          244 SPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVESLKA  320 (331)
Q Consensus       244 ~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~~~  320 (331)
                      .. ..|+||++ ++.+|++|+++.|.+.++......+.............|++|+ +.|||+| .+++++|+++++|+++
T Consensus       347 ~~-~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~  425 (436)
T PLN02166        347 GE-HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEPKISLREGLPLMVSDFRN  425 (436)
T ss_pred             cC-CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Confidence            54 45688764 5679999999999999853211111111122334567899999 7799999 5999999999999987


Q ss_pred             cC
Q 020110          321 KG  322 (331)
Q Consensus       321 ~~  322 (331)
                      +.
T Consensus       426 ~~  427 (436)
T PLN02166        426 RI  427 (436)
T ss_pred             Hh
Confidence            54

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=1.6e-43  Score=336.47  Aligned_cols=310  Identities=18%  Similarity=0.247  Sum_probs=235.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchH-HHHHhcCccEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA-VSRAVEGCKGV   84 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~v   84 (331)
                      .++|+|||||||||||++|+++|++. |+ +|++++|..........    .. +++++.+|++|... +.++++++|+|
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-~V~~l~r~~~~~~~~~~----~~-~~~~~~gDl~d~~~~l~~~l~~~D~V  386 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNY-EVYGLDIGSDAISRFLG----HP-RFHFVEGDISIHSEWIEYHIKKCDVV  386 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCc-EEEEEeCCchhhhhhcC----CC-ceEEEeccccCcHHHHHHHhcCCCEE
Confidence            35679999999999999999999986 69 99999987643222211    11 68899999998765 56778899999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhh-ccCcc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK-SRKKW  163 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~-~~~~~  163 (331)
                      ||+|+.........++...+++|+.++.+++++|++.+ ++|||+||. .+|+...  ..+++|+++..+..+. .+.+.
T Consensus       387 iHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~-~vyg~~~--~~~~~E~~~~~~~~p~~~p~s~  462 (660)
T PRK08125        387 LPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTS-EVYGMCT--DKYFDEDTSNLIVGPINKQRWI  462 (660)
T ss_pred             EECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcch-hhcCCCC--CCCcCccccccccCCCCCCccc
Confidence            99999776544455677889999999999999999988 899999997 5565433  2467887654221111 13357


Q ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCC-------CCChhHHHHHHHHcCCCCc-c--CcCCCCceeHHH
Q 020110          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-------YLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKD  233 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D  233 (331)
                      |+.+|.++|++++.+++.++++++++||+++|||+...       ....+..++.++..+.++. .  +++.++|+|++|
T Consensus       463 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~D  542 (660)
T PRK08125        463 YSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRD  542 (660)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHH
Confidence            99999999999999998889999999999999997532       1134567777877777764 3  458899999999


Q ss_pred             HHHHHHHhhcCCC--CCc-eEEEec-c-ccCHHHHHHHHHHhCCCCCCCCCCCCC---------------CCCccccccc
Q 020110          234 VAKAQVLLFESPA--ASG-RYLCTN-G-IYQFGDFAERVSKLFPEFPVHRFDGET---------------QPGLIPCKDA  293 (331)
Q Consensus       234 ~a~a~~~~l~~~~--~~g-~~~~~~-~-~~s~~e~~~~i~~~~~~~~~~~~~~~~---------------~~~~~~~~~~  293 (331)
                      +|++++.++++..  ..| +||+++ + .+|++|+++.+.+.++..+........               .........|
T Consensus       543 va~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  622 (660)
T PRK08125        543 GIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPS  622 (660)
T ss_pred             HHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccccccccCCC
Confidence            9999999998753  234 787765 3 589999999999998532211100000               0122344579


Q ss_pred             hHHH-HhhCCCc-cCHHHHHHHHHHHHHHcCCCCc
Q 020110          294 AKRL-MDLGLVF-TPVEDAVRETVESLKAKGFLGQ  326 (331)
Q Consensus       294 ~~k~-~~lG~~~-~~~~~~l~~~~~~~~~~~~~~~  326 (331)
                      ++|+ +.|||+| .+++++|+++++|++++..++.
T Consensus       623 ~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~~~~  657 (660)
T PRK08125        623 IRNARRLLDWEPKIDMQETIDETLDFFLRTVDLTE  657 (660)
T ss_pred             hHHHHHHhCCCCCCcHHHHHHHHHHHHHhcccccc
Confidence            9999 7899999 5999999999999999887764

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=1.2e-43  Score=321.32  Aligned_cols=309  Identities=17%  Similarity=0.149  Sum_probs=224.3

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-c----------------hhhcCCCCCCCcEEEEEccC
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-S----------------HLFALPGAGDANLRVFEADV   68 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~----------------~~~~~~~~~~~~~~~~~~Dl   68 (331)
                      ..+||+||||||+||||++|+++|+++|+ +|++++|..... .                .+..+......+++++.+|+
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl  122 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGY-EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI  122 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence            34678999999999999999999999999 999986532110 0                00000000011688999999


Q ss_pred             CCchHHHHHhc--CccEEEEcccCCCCCCCCCc---hhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCccceeccCCCCC
Q 020110           69 LDSGAVSRAVE--GCKGVFHVASPCTLEDPVDP---EKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWK  142 (331)
Q Consensus        69 ~~~~~~~~~~~--~~d~vih~a~~~~~~~~~~~---~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~  142 (331)
                      +|.+.+.++++  ++|+|||+|+.........+   ....+++|+.++.+++++|++.+++ +|||+||. .+|+...  
T Consensus       123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~-~vYG~~~--  199 (442)
T PLN02572        123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTM-GEYGTPN--  199 (442)
T ss_pred             CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecc-eecCCCC--
Confidence            99999999987  48999999976543222222   2456789999999999999999885 89999997 5665432  


Q ss_pred             CccccC-----------CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---------
Q 020110          143 GKVFDE-----------TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---------  202 (331)
Q Consensus       143 ~~~~~E-----------~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---------  202 (331)
                       .+++|           +++..   +..+.++|+.+|.++|.++..|++.+|++++++||+++|||+....         
T Consensus       200 -~~~~E~~i~~~~~~~e~~~~~---~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~  275 (442)
T PLN02572        200 -IDIEEGYITITHNGRTDTLPY---PKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINR  275 (442)
T ss_pred             -CCCcccccccccccccccccC---CCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccc
Confidence             12222           21111   1234468999999999999999988999999999999999985431         


Q ss_pred             -------CChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHHHHHhhcCCCCCc---eEEEeccccCHHHHHHHHHH
Q 020110          203 -------LNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQVLLFESPAASG---RYLCTNGIYQFGDFAERVSK  269 (331)
Q Consensus       203 -------~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a~~~~l~~~~~~g---~~~~~~~~~s~~e~~~~i~~  269 (331)
                             ...+..++.++..|+++. +  |++.|||+||+|+|++++.+++.....|   +||++++.+|+.|+++.+.+
T Consensus       276 ~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~  355 (442)
T PLN02572        276 LDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTK  355 (442)
T ss_pred             cCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHH
Confidence                   123445667777787664 3  4588999999999999999998653333   57777778999999999999


Q ss_pred             h---CCCCCCCCCCC--C-CCCCccccccchHHHHhhCCCc-c---CHHHHHHHHHHHHHHcCC
Q 020110          270 L---FPEFPVHRFDG--E-TQPGLIPCKDAAKRLMDLGLVF-T---PVEDAVRETVESLKAKGF  323 (331)
Q Consensus       270 ~---~~~~~~~~~~~--~-~~~~~~~~~~~~~k~~~lG~~~-~---~~~~~l~~~~~~~~~~~~  323 (331)
                      .   ++ .+.+....  . ..........|.+|+++|||+| .   +++++|.+++.||+.+-+
T Consensus       356 ~~~~~g-~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~~~  418 (442)
T PLN02572        356 AGEKLG-LDVEVISVPNPRVEAEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDRVD  418 (442)
T ss_pred             HHHhhC-CCCCeeeCCCCcccccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhhcc
Confidence            8   64 22221111  1 1122334567889997799999 4   899999999999986543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=2.3e-42  Score=307.60  Aligned_cols=298  Identities=16%  Similarity=0.130  Sum_probs=222.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      .|+|||||||||||++|+++|+++|+ +|++++|.....  ....   .. ..+++.+|+++.+.+.+++.++|+|||+|
T Consensus        21 ~~~IlVtGgtGfIG~~l~~~L~~~G~-~V~~v~r~~~~~--~~~~---~~-~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   93 (370)
T PLN02695         21 KLRICITGAGGFIASHIARRLKAEGH-YIIASDWKKNEH--MSED---MF-CHEFHLVDLRVMENCLKVTKGVDHVFNLA   93 (370)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhCCC-EEEEEEeccccc--cccc---cc-cceEEECCCCCHHHHHHHHhCCCEEEEcc
Confidence            36999999999999999999999999 999999864321  1110   00 35678899999998888889999999999


Q ss_pred             cCCCCC-CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC--CCccccCCC--CCChhhhhccCcc
Q 020110           89 SPCTLE-DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW--KGKVFDETS--WTDLEYCKSRKKW  163 (331)
Q Consensus        89 ~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~--~~~~~~E~~--~~~~~~~~~~~~~  163 (331)
                      +..... ....++...++.|+.++.+|+++|++.++++|||+||. .+|+....  ...++.|++  +..|      .+.
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~-~vYg~~~~~~~~~~~~E~~~~p~~p------~s~  166 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSA-CIYPEFKQLETNVSLKESDAWPAEP------QDA  166 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCch-hhcCCccccCcCCCcCcccCCCCCC------CCH
Confidence            865421 12223455678999999999999999999999999997 45654332  112466654  3333      358


Q ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHHHHHcC-CCCc-c--CcCCCCceeHHHHHH
Q 020110          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQG-SKDT-Q--EYHWLGAVPVKDVAK  236 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~-~~~~-~--~~~~~~~v~v~D~a~  236 (331)
                      |+.+|..+|++++.++++++++++++||+++|||+....   ......++.++..+ .++. +  +++.++|+|++|+++
T Consensus       167 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~  246 (370)
T PLN02695        167 YGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVE  246 (370)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHH
Confidence            999999999999999888899999999999999975321   11234555555543 4443 3  457899999999999


Q ss_pred             HHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHH-HhhCCCc-cCHHHHHHH
Q 020110          237 AQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRE  313 (331)
Q Consensus       237 a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~  313 (331)
                      ++..+++.. ..+.||++ +..+|++|+++.+.+.++. +.+...............|++|+ +.|||+| .+++++|++
T Consensus       247 ai~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~-~~~i~~~~~~~~~~~~~~d~sk~~~~lgw~p~~~l~e~i~~  324 (370)
T PLN02695        247 GVLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENK-KLPIKHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRI  324 (370)
T ss_pred             HHHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCC-CCCceecCCCCCccccccCHHHHHHhcCCCCCCCHHHHHHH
Confidence            999988764 34678665 5679999999999998843 22222111111223456899999 7799999 599999999


Q ss_pred             HHHHHHHcC
Q 020110          314 TVESLKAKG  322 (331)
Q Consensus       314 ~~~~~~~~~  322 (331)
                      +++|++++.
T Consensus       325 ~~~~~~~~~  333 (370)
T PLN02695        325 TYFWIKEQI  333 (370)
T ss_pred             HHHHHHHHH
Confidence            999998753

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=1.5e-42  Score=313.40  Aligned_cols=300  Identities=20%  Similarity=0.209  Sum_probs=224.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      +.|+|||||||||||++|+++|+++|+ +|++++|..... ........ .. +++++.+|+.++     ++.++|+|||
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~-~V~~ld~~~~~~~~~~~~~~~-~~-~~~~i~~D~~~~-----~l~~~D~ViH  189 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGD-SVIVVDNFFTGRKENVMHHFS-NP-NFELIRHDVVEP-----ILLEVDQIYH  189 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcC-EEEEEeCCCccchhhhhhhcc-CC-ceEEEECCccCh-----hhcCCCEEEE
Confidence            457999999999999999999999999 999998643221 11111111 11 688889999764     3467999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +|+......+..++...+++|+.++.+|+++|++.++ +|||+||. .+|+....  .+.+|+.+.... +..+.+.|+.
T Consensus       190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~-~VYg~~~~--~p~~E~~~~~~~-P~~~~s~Y~~  264 (442)
T PLN02206        190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS-EVYGDPLQ--HPQVETYWGNVN-PIGVRSCYDE  264 (442)
T ss_pred             eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECCh-HHhCCCCC--CCCCccccccCC-CCCccchHHH
Confidence            9997655444456788999999999999999999986 89999997 55654432  456776432110 0112357999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCC-CCChhHHHHHHHHcCCCCc-cC--cCCCCceeHHHHHHHHHHhh
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-YLNASCAVLQQLLQGSKDT-QE--YHWLGAVPVKDVAKAQVLLF  242 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~-~~--~~~~~~v~v~D~a~a~~~~l  242 (331)
                      +|..+|+++..|.++++++++++||+++|||+... ....+..++.++..+.++. ++  ++.++|+|++|+|++++.++
T Consensus       265 SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~  344 (442)
T PLN02206        265 GKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM  344 (442)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHH
Confidence            99999999999988889999999999999998532 1234567778888877765 44  46899999999999999988


Q ss_pred             cCCCCCceEEEe-ccccCHHHHHHHHHHhCCC-CCCCCCCCCCCCCccccccchHHH-HhhCCCc-cCHHHHHHHHHHHH
Q 020110          243 ESPAASGRYLCT-NGIYQFGDFAERVSKLFPE-FPVHRFDGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVESL  318 (331)
Q Consensus       243 ~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~  318 (331)
                      +.. ..|.||++ ++.+|+.|+++.+++.++. ..+...+ ...........|++|+ ++|||+| .+++|+|+++++|+
T Consensus       345 e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p-~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~  422 (442)
T PLN02206        345 EGE-HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRP-NTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDF  422 (442)
T ss_pred             hcC-CCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCC-CCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence            754 45678665 5779999999999999842 1221111 1112234567899999 7899999 59999999999999


Q ss_pred             HHcC
Q 020110          319 KAKG  322 (331)
Q Consensus       319 ~~~~  322 (331)
                      ++.-
T Consensus       423 ~~~~  426 (442)
T PLN02206        423 RQRV  426 (442)
T ss_pred             HHhh
Confidence            8754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3e-42  Score=305.19  Aligned_cols=299  Identities=16%  Similarity=0.133  Sum_probs=226.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhhcCCC----CCCCcEEEEEccCCCchHHHHHhcC--c
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPG----AGDANLRVFEADVLDSGAVSRAVEG--C   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~--~   81 (331)
                      |+|||||||||||++|+++|++.|+ +|++++|++...  ..+..+..    ..+.+++++.+|++|.+.+.+++++  +
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   79 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGY-EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKP   79 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCC-EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCC
Confidence            5899999999999999999999999 999999875421  11211110    0011688999999999999999985  6


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC---EEEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      |+|||+|+..........+...+++|+.++.+++++|++.+++   +|||+||+ .+|+....  .+++|+++..|.   
T Consensus        80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~-~vyg~~~~--~~~~E~~~~~p~---  153 (343)
T TIGR01472        80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTS-ELYGKVQE--IPQNETTPFYPR---  153 (343)
T ss_pred             CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccH-HhhCCCCC--CCCCCCCCCCCC---
Confidence            9999999976543334446677889999999999999988764   89999997 55654432  467888776655   


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC-C-ChhHHHHHHHHcCCCCc--c--CcCCCCceeHH
Q 020110          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-L-NASCAVLQQLLQGSKDT--Q--EYHWLGAVPVK  232 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~-~~~~~~~~~~~~~~~~~--~--~~~~~~~v~v~  232 (331)
                         ++|+.||..+|.+++.+++++++++++.|+.++|||+.... . ..+...+.++..|.+..  +  |++.++|+||+
T Consensus       154 ---~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~  230 (343)
T TIGR01472       154 ---SPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAK  230 (343)
T ss_pred             ---ChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHH
Confidence               48999999999999999888899999999999999974322 1 22344555666665322  3  45899999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCC---------------------CCC-CCCCCccc
Q 020110          233 DVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPEFPVHR---------------------FDG-ETQPGLIP  289 (331)
Q Consensus       233 D~a~a~~~~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~---------------------~~~-~~~~~~~~  289 (331)
                      |+|++++.+++++. .+.||+ +++++|++|+++.+.+.++ .+...                     ... ........
T Consensus       231 D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (343)
T TIGR01472       231 DYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIG-KTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDL  308 (343)
T ss_pred             HHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcC-CCcccccccccccccccccCceeEEeCccccCCCccch
Confidence            99999999988653 467865 5677999999999999985 22110                     000 01122334


Q ss_pred             cccchHHH-HhhCCCc-cCHHHHHHHHHHHHHH
Q 020110          290 CKDAAKRL-MDLGLVF-TPVEDAVRETVESLKA  320 (331)
Q Consensus       290 ~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~~~  320 (331)
                      ...|++|+ ++|||+| .+++|+|+++++|+++
T Consensus       309 ~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       309 LLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             hcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence            46799999 7899999 5999999999999874

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=4.2e-43  Score=282.03  Aligned_cols=302  Identities=21%  Similarity=0.241  Sum_probs=243.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.++|+||||.||||+|||+.|+.+|| .|++++.-..............+ +++.+.-|+.     ..++.++|-|+|+
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh-~VIa~Dn~ftg~k~n~~~~~~~~-~fel~~hdv~-----~pl~~evD~IyhL   98 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGH-EVIALDNYFTGRKENLEHWIGHP-NFELIRHDVV-----EPLLKEVDQIYHL   98 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCC-eEEEEecccccchhhcchhccCc-ceeEEEeech-----hHHHHHhhhhhhh
Confidence            346999999999999999999999999 99999764333322222111122 5666667764     4578889999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |+..++.....++...+..|+.++.+++-.|++.+ +||++.||+ .+|+.+..  .|..|+-+.+-. +..+..-|+..
T Consensus        99 Aapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTs-eVYgdp~~--hpq~e~ywg~vn-pigpr~cydeg  173 (350)
T KOG1429|consen   99 AAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTS-EVYGDPLV--HPQVETYWGNVN-PIGPRSCYDEG  173 (350)
T ss_pred             ccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecc-cccCCccc--CCCccccccccC-cCCchhhhhHH
Confidence            99998877777889999999999999999999998 799999986 88888664  666666544322 12344579999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCC-CCChhHHHHHHHHcCCCCc-cCc--CCCCceeHHHHHHHHHHhhc
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-YLNASCAVLQQLLQGSKDT-QEY--HWLGAVPVKDVAKAQVLLFE  243 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~-~~~--~~~~~v~v~D~a~a~~~~l~  243 (331)
                      |+.+|.++..|.++.|+.+.|.|+++.|||.-.- +......++.+.+.+.++. +|+  +.|+|.||.|++++++++++
T Consensus       174 Kr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~  253 (350)
T KOG1429|consen  174 KRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLME  253 (350)
T ss_pred             HHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhc
Confidence            9999999999999999999999999999997532 2356678899999999988 555  88999999999999999999


Q ss_pred             CCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHH-HhhCCCc-cCHHHHHHHHHHHHHHc
Q 020110          244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVESLKAK  321 (331)
Q Consensus       244 ~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~~~~  321 (331)
                      ++....++++.++.+|+.||++++.+..+....+.+....+.+...+..|.+++ +.|||.| .+|+|+|+.++.|+++.
T Consensus       254 s~~~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~~  333 (350)
T KOG1429|consen  254 SDYRGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRER  333 (350)
T ss_pred             CCCcCCcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHHH
Confidence            886655556677889999999999999854444455555556677788999999 7799999 69999999999999764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=6.3e-42  Score=327.31  Aligned_cols=304  Identities=20%  Similarity=0.208  Sum_probs=231.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC--CCCEEEEEecCCC--ccchhhcCCCCCCCcEEEEEccCCCchHHHHHh--cCcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--EGCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d   82 (331)
                      +|+|||||||||||++|+++|+++  ++ +|++++|...  ....+.... ... +++++.+|+.|.+.+..++  .++|
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~-~V~~~d~~~~~~~~~~l~~~~-~~~-~v~~~~~Dl~d~~~~~~~~~~~~~D   82 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDY-KIVVLDKLDYCSNLKNLNPSK-SSP-NFKFVKGDIASADLVNYLLITEGID   82 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCC-EEEEEeCCCccchhhhhhhcc-cCC-CeEEEECCCCChHHHHHHHhhcCCC
Confidence            579999999999999999999998  57 8999887431  111111110 112 7899999999998887765  5799


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCC-CCccccCCCCCChhhhhcc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSR  160 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~-~~~~~~E~~~~~~~~~~~~  160 (331)
                      +|||+|+.........++...++.|+.++.+++++|++.+ +++|||+||. .+|+.... ...+.+|+++..|.     
T Consensus        83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~-~vyg~~~~~~~~~~~E~~~~~p~-----  156 (668)
T PLN02260         83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTD-EVYGETDEDADVGNHEASQLLPT-----  156 (668)
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcch-HHhCCCccccccCccccCCCCCC-----
Confidence            9999999876544444567789999999999999999987 8999999997 55654432 11223566555544     


Q ss_pred             CcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHH
Q 020110          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKA  237 (331)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a  237 (331)
                       ++|+.+|..+|++++.+.++++++++++||+++|||+.... ..+..++..+..+.++. .  +++.++|+|++|+|++
T Consensus       157 -~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a  234 (668)
T PLN02260        157 -NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEA  234 (668)
T ss_pred             -CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHH
Confidence             48999999999999999888899999999999999986432 34556667777777665 3  4478999999999999


Q ss_pred             HHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCC-C-CCCCCCCCccccccchHHHHhhCCCc-cCHHHHHHH
Q 020110          238 QVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVH-R-FDGETQPGLIPCKDAAKRLMDLGLVF-TPVEDAVRE  313 (331)
Q Consensus       238 ~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~k~~~lG~~~-~~~~~~l~~  313 (331)
                      +..+++....+++||++ ++.+|+.|+++.+++.++..+.. . .....+.......+|++|+++|||+| ++++|+|++
T Consensus       235 ~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw~p~~~~~egl~~  314 (668)
T PLN02260        235 FEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQERTSWEEGLKK  314 (668)
T ss_pred             HHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHHcCCCCCCCHHHHHHH
Confidence            99998876566789775 56799999999999998532111 1 11111122334568999998899999 699999999


Q ss_pred             HHHHHHHcCC
Q 020110          314 TVESLKAKGF  323 (331)
Q Consensus       314 ~~~~~~~~~~  323 (331)
                      +++|++++..
T Consensus       315 ~i~w~~~~~~  324 (668)
T PLN02260        315 TMEWYTSNPD  324 (668)
T ss_pred             HHHHHHhChh
Confidence            9999998755

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=1.5e-41  Score=302.09  Aligned_cols=303  Identities=19%  Similarity=0.202  Sum_probs=226.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC--ccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVF   85 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi   85 (331)
                      |+|||||||||||++|+++|+++|+..|+++++...  .......+.. .. +++++.+|++|.+++.+++++  +|+||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSD-SE-RYVFEHADICDRAELDRIFAQHQPDAVM   78 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhccc-CC-ceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence            489999999999999999999999724665554321  1111111111 11 578899999999999998864  89999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC---------CCCEEEEeCccceeccCCCCC-------C-ccccC
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF---------GVRRVVVTSSISAIVPNPGWK-------G-KVFDE  148 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~~~~~~~~~~-------~-~~~~E  148 (331)
                      |+|+..........+...+++|+.++.+++++|++.         ++++|||+||.+ +|+....+       . .+++|
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~~~~~~~E  157 (352)
T PRK10084         79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE-VYGDLPHPDEVENSEELPLFTE  157 (352)
T ss_pred             ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh-hcCCCCccccccccccCCCccc
Confidence            999976543334456789999999999999999874         467899999974 45432110       0 23677


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~  225 (331)
                      +++..|.      +.|+.+|..+|.+++.++++++++++++|++.+|||+.... ..+..++.++..+..+. +  +++.
T Consensus       158 ~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~  230 (352)
T PRK10084        158 TTAYAPS------SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQI  230 (352)
T ss_pred             cCCCCCC------ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCCCCeE
Confidence            7666554      48999999999999999888999999999999999986432 34556677777776554 3  5588


Q ss_pred             CCceeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCC---------CCCCCCCccccccchH
Q 020110          226 LGAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRF---------DGETQPGLIPCKDAAK  295 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~  295 (331)
                      ++|+|++|+|+++..+++.....+.|+++ ++..|++|+++.+++.++.. .|..         ............+|++
T Consensus       231 ~~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~d~~  309 (352)
T PRK10084        231 RDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEI-VPKATSYREQITYVADRPGHDRRYAIDAS  309 (352)
T ss_pred             EeeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccc-cccccchhhhccccccCCCCCceeeeCHH
Confidence            99999999999999998875555688775 56689999999999988431 1110         0011112234568999


Q ss_pred             HH-HhhCCCc-cCHHHHHHHHHHHHHHcCC
Q 020110          296 RL-MDLGLVF-TPVEDAVRETVESLKAKGF  323 (331)
Q Consensus       296 k~-~~lG~~~-~~~~~~l~~~~~~~~~~~~  323 (331)
                      |+ +++||+| .+++++|+++++|++++..
T Consensus       310 k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~  339 (352)
T PRK10084        310 KISRELGWKPQETFESGIRKTVEWYLANTE  339 (352)
T ss_pred             HHHHHcCCCCcCCHHHHHHHHHHHHHhCHH
Confidence            99 7799999 5999999999999998754

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=1e-40  Score=294.19  Aligned_cols=299  Identities=31%  Similarity=0.450  Sum_probs=229.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+||||||+||||+++++.|+++|+ +|++++|++.........      +++++.+|+.|.+++.++++++|+|||+|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~   73 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGE-EVRVLVRPTSDRRNLEGL------DVEIVEGDLRDPASLRKAVAGCRALFHVAA   73 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCC-EEEEEEecCccccccccC------CceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence            4799999999999999999999999 999999976543322211      688999999999999999999999999998


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (331)
                      ....  +..++...++.|+.++.++++++++.+++++|++||..+ |+... .+.+++|+++..+..   +.+.|+.+|.
T Consensus        74 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~-~~~~~-~~~~~~e~~~~~~~~---~~~~Y~~sK~  146 (328)
T TIGR03466        74 DYRL--WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVAT-LGVRG-DGTPADETTPSSLDD---MIGHYKRSKF  146 (328)
T ss_pred             eccc--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhh-cCcCC-CCCCcCccCCCCccc---ccChHHHHHH
Confidence            6432  334567889999999999999999999999999999744 44221 125678887655431   2347999999


Q ss_pred             HHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCCCc
Q 020110          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG  249 (331)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g  249 (331)
                      .+|++++.++.+++++++++||+.+||++..... ....++.....+......+..++|+|++|+|+++..++.....+.
T Consensus       147 ~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~  225 (328)
T TIGR03466       147 LAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPT-PTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGE  225 (328)
T ss_pred             HHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCC-cHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCc
Confidence            9999999998778999999999999999864321 222333444444333344556899999999999999998754433


Q ss_pred             eEEEeccccCHHHHHHHHHHhCCCCCCCCCCCC-------------------CCCC---------ccccccchHHH-Hhh
Q 020110          250 RYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGE-------------------TQPG---------LIPCKDAAKRL-MDL  300 (331)
Q Consensus       250 ~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-------------------~~~~---------~~~~~~~~~k~-~~l  300 (331)
                      .|+++++++|+.|+++.+.+.++. +.+....+                   ....         .....+|++|+ +.|
T Consensus       226 ~~~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  304 (328)
T TIGR03466       226 RYILGGENLTLKQILDKLAEITGR-PAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVREL  304 (328)
T ss_pred             eEEecCCCcCHHHHHHHHHHHhCC-CCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHc
Confidence            688888889999999999999843 22211110                   0000         12456799999 889


Q ss_pred             CCCccCHHHHHHHHHHHHHHcCCC
Q 020110          301 GLVFTPVEDAVRETVESLKAKGFL  324 (331)
Q Consensus       301 G~~~~~~~~~l~~~~~~~~~~~~~  324 (331)
                      ||+|++++++|++++.|+++++++
T Consensus       305 g~~p~~~~~~i~~~~~~~~~~~~~  328 (328)
T TIGR03466       305 GYRQRPAREALRDAVEWFRANGYL  328 (328)
T ss_pred             CCCCcCHHHHHHHHHHHHHHhCCC
Confidence            999999999999999999998764

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.8e-42  Score=276.64  Aligned_cols=299  Identities=22%  Similarity=0.261  Sum_probs=236.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC--CCCEEEEEecCC--CccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPG--SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKG   83 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   83 (331)
                      ++++||||+||||++.+..+...  .+ ..+.++.-.  +....+.+... .+ +.+++++|+.+...+..++.  ++|.
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~-~~v~idkL~~~s~~~~l~~~~n-~p-~ykfv~~di~~~~~~~~~~~~~~id~   83 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDY-KFVNLDKLDYCSNLKNLEPVRN-SP-NYKFVEGDIADADLVLYLFETEEIDT   83 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCC-cEEEEeecccccccchhhhhcc-CC-CceEeeccccchHHHHhhhccCchhh
Confidence            69999999999999999999876  34 444444311  11222222211 12 78999999999998888875  4899


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceeccCCCCCCcccc-CCCCCChhhhhccC
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFD-ETSWTDLEYCKSRK  161 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~-E~~~~~~~~~~~~~  161 (331)
                      |+|.|+..+.+.+..++......|+.++..|+++++.. ++++|||+||. .+||+.+.  .... |.+.++|..     
T Consensus        84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTd-eVYGds~~--~~~~~E~s~~nPtn-----  155 (331)
T KOG0747|consen   84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTD-EVYGDSDE--DAVVGEASLLNPTN-----  155 (331)
T ss_pred             hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEeccc-ceecCccc--cccccccccCCCCC-----
Confidence            99999999988888889999999999999999999999 79999999998 66766654  2333 888888774     


Q ss_pred             cchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCc--CCCCceeHHHHHHHH
Q 020110          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEY--HWLGAVPVKDVAKAQ  238 (331)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~v~v~D~a~a~  238 (331)
                       +|+.+|+++|..++.|.+++|++++++|.++||||++.+. ..++.++.....+.+.+ .|+  +.++|+|++|+++++
T Consensus       156 -pyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~  233 (331)
T KOG0747|consen  156 -PYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAF  233 (331)
T ss_pred             -chHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHH
Confidence             9999999999999999999999999999999999998653 45667777666777766 444  889999999999999


Q ss_pred             HHhhcCCCCCceEEE-eccccCHHHHHHHHHHhC----CCCCCC---CCCCCCCCCccccccchHHHHhhCCCc-cCHHH
Q 020110          239 VLLFESPAASGRYLC-TNGIYQFGDFAERVSKLF----PEFPVH---RFDGETQPGLIPCKDAAKRLMDLGLVF-TPVED  309 (331)
Q Consensus       239 ~~~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~k~~~lG~~~-~~~~~  309 (331)
                      ..+++....+.+||+ ++.+.+..|+++.|.+.+    +..+.+   ....+.+.......++.+|++.|||+| +++++
T Consensus       234 ~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~~e  313 (331)
T KOG0747|consen  234 KAVLEKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPTTPWEE  313 (331)
T ss_pred             HHHHhcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCcccCcHHH
Confidence            999988655668855 677899999999998876    222211   222233333344678999999999999 69999


Q ss_pred             HHHHHHHHHHHc
Q 020110          310 AVRETVESLKAK  321 (331)
Q Consensus       310 ~l~~~~~~~~~~  321 (331)
                      +|+.+++||.++
T Consensus       314 GLrktie~y~~~  325 (331)
T KOG0747|consen  314 GLRKTIEWYTKN  325 (331)
T ss_pred             HHHHHHHHHHhh
Confidence            999999999765

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=5.8e-41  Score=296.78  Aligned_cols=302  Identities=16%  Similarity=0.114  Sum_probs=228.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc--cchhhcCCC---CCCCcEEEEEccCCCchHHHHHhcC--
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPG---AGDANLRVFEADVLDSGAVSRAVEG--   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~--   80 (331)
                      ++|+||||||+||||++|+++|+++|+ +|++++|+...  ...+..+..   ..+.+++++.+|++|.+++.+++++  
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   83 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGY-EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK   83 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCC-EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence            457999999999999999999999999 99999886542  112221110   0111688999999999999988874  


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-----EEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-----RVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      +|+|||+|+.........++...+++|+.++.++++++++.+++     +||++||. .+|+...   .+++|+++..|.
T Consensus        84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~-~vyg~~~---~~~~E~~~~~p~  159 (340)
T PLN02653         84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSS-EMYGSTP---PPQSETTPFHPR  159 (340)
T ss_pred             CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccH-HHhCCCC---CCCCCCCCCCCC
Confidence            69999999986543334456777899999999999999988875     89999987 5666443   367888876655


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCCc--c--CcCCCCce
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAV  229 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~v  229 (331)
                            +.|+.+|..+|.+++.++++++++++..|+.++|||+.....  ..+..++.++..+.+..  .  +++.++|+
T Consensus       160 ------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i  233 (340)
T PLN02653        160 ------SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWG  233 (340)
T ss_pred             ------ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecce
Confidence                  489999999999999999889999999999999999754321  12233344555665443  2  45789999


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCC---CCCCCCC-CCCCCccccccchHHH-HhhCCC
Q 020110          230 PVKDVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPEF---PVHRFDG-ETQPGLIPCKDAAKRL-MDLGLV  303 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~k~-~~lG~~  303 (331)
                      |++|+|++++.+++... .+.||+ +++++|++|+++.+.+.++..   .+..... ...........|++|+ ++|||+
T Consensus       234 ~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~  312 (340)
T PLN02653        234 FAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLGWK  312 (340)
T ss_pred             eHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHhCCC
Confidence            99999999999998653 467755 567799999999999998421   1111111 1122334556799999 789999


Q ss_pred             c-cCHHHHHHHHHHHHHHc
Q 020110          304 F-TPVEDAVRETVESLKAK  321 (331)
Q Consensus       304 ~-~~~~~~l~~~~~~~~~~  321 (331)
                      | ++++++|+++++|++..
T Consensus       313 p~~~l~~gi~~~~~~~~~~  331 (340)
T PLN02653        313 PKVGFEQLVKMMVDEDLEL  331 (340)
T ss_pred             CCCCHHHHHHHHHHHHHHh
Confidence            9 59999999999998854

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.5e-40  Score=291.76  Aligned_cols=301  Identities=19%  Similarity=0.202  Sum_probs=229.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCC--ccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEE
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~v   84 (331)
                      +|||||||||||++++++|++.|  + +|++++|...  ....+..... .. +++++.+|++|++++.+++++  +|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDA-EVIVLDKLTYAGNLENLADLED-NP-RYRFVKGDIGDRELVSRLFTEHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCC-EEEEecCCCcchhhhhhhhhcc-CC-CcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence            58999999999999999999987  6 8998876422  1111111111 11 678899999999999999987  8999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (331)
                      ||+|+........+.+...+++|+.++.+++++|++.+.+ ++||+||. .+|+.... ..+++|+++..|.      +.
T Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~-~v~g~~~~-~~~~~e~~~~~~~------~~  149 (317)
T TIGR01181        78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTD-EVYGDLEK-GDAFTETTPLAPS------SP  149 (317)
T ss_pred             EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeecc-ceeCCCCC-CCCcCCCCCCCCC------Cc
Confidence            9999976544444556778999999999999999887544 89999997 45554332 2367787766554      48


Q ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHHHHHHH
Q 020110          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVL  240 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~~~  240 (331)
                      |+.+|..+|.+++.++++.+++++++||+.+|||..... ..+..++.++..+.++.   .+++.++|+|++|+|+++..
T Consensus       150 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~  228 (317)
T TIGR01181       150 YSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYL  228 (317)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHH
Confidence            999999999999999888899999999999999976432 34566777777777654   34478999999999999999


Q ss_pred             hhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCC-CCCCCCCCCccccccchHHH-HhhCCCc-cCHHHHHHHHHH
Q 020110          241 LFESPAASGRYLC-TNGIYQFGDFAERVSKLFPEFPVH-RFDGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVE  316 (331)
Q Consensus       241 ~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~  316 (331)
                      ++.+...+++|++ ++++++++|+++.+.+.++..+.. ...............|++|+ +.|||+| ++++++++++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~  308 (317)
T TIGR01181       229 VLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQ  308 (317)
T ss_pred             HHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHH
Confidence            9987655568876 456799999999999999532211 11111111222345889999 7899999 599999999999


Q ss_pred             HHHHcCC
Q 020110          317 SLKAKGF  323 (331)
Q Consensus       317 ~~~~~~~  323 (331)
                      ||++++.
T Consensus       309 ~~~~~~~  315 (317)
T TIGR01181       309 WYLDNEW  315 (317)
T ss_pred             HHHhccC
Confidence            9988764

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=3.2e-40  Score=293.70  Aligned_cols=304  Identities=17%  Similarity=0.171  Sum_probs=226.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc----hhhcCCCCCCCcEEEEEccCCCchHHHHHhc--Ccc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS----HLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   82 (331)
                      +|+|||||||||||++|+++|+++|+ +|++++|......    ...........+++++.+|++|++.+.++++  ++|
T Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d   83 (352)
T PLN02240          5 GRTILVTGGAGYIGSHTVLQLLLAGY-KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD   83 (352)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence            46999999999999999999999999 9999987532211    1111111111168899999999999988886  589


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      +|||+|+.........++...++.|+.++.+++++|++.++++||++||+ .+|+...  ..+++|+++..|.      +
T Consensus        84 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~-~vyg~~~--~~~~~E~~~~~~~------~  154 (352)
T PLN02240         84 AVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSA-TVYGQPE--EVPCTEEFPLSAT------N  154 (352)
T ss_pred             EEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH-HHhCCCC--CCCCCCCCCCCCC------C
Confidence            99999997654333455778899999999999999999999999999997 5565433  2578898877665      3


Q ss_pred             chhHHHHHHHHHHHHHHHH-cCCeEEEEcCCcccCCCCC------C-C-CChhHHHHHHHHcCCC--Cc---------cC
Q 020110          163 WYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQ------P-Y-LNASCAVLQQLLQGSK--DT---------QE  222 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~-~~~~~~~lR~~~v~G~~~~------~-~-~~~~~~~~~~~~~~~~--~~---------~~  222 (331)
                      .|+.+|..+|++++.+++. .+++++++|++++||++..      + . ...+..++.++..+..  +.         .|
T Consensus       155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  234 (352)
T PLN02240        155 PYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDG  234 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCC
Confidence            8999999999999988754 5799999999999997532      1 1 1122234455554432  21         23


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCC----CCC-ceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCC-CCCCccccccchH
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESP----AAS-GRYLC-TNGIYQFGDFAERVSKLFPEFPVHRFDGE-TQPGLIPCKDAAK  295 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~----~~~-g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  295 (331)
                      .+.++|+|++|+|++++.++...    ... ++||+ +++++|++|+++.+++.++ .+.+..... ..........|++
T Consensus       235 ~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~  313 (352)
T PLN02240        235 TGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASG-KKIPLKLAPRRPGDAEEVYASTE  313 (352)
T ss_pred             CEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhC-CCCCceeCCCCCCChhhhhcCHH
Confidence            57799999999999998887642    233 47866 5677999999999999984 333332211 1122334557899


Q ss_pred             HH-HhhCCCcc-CHHHHHHHHHHHHHHcCC
Q 020110          296 RL-MDLGLVFT-PVEDAVRETVESLKAKGF  323 (331)
Q Consensus       296 k~-~~lG~~~~-~~~~~l~~~~~~~~~~~~  323 (331)
                      |+ ++|||+|+ +++++|+++++|++++..
T Consensus       314 k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~  343 (352)
T PLN02240        314 KAEKELGWKAKYGIDEMCRDQWNWASKNPY  343 (352)
T ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHhCcc
Confidence            99 78999995 999999999999998864

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=2.7e-40  Score=288.74  Aligned_cols=284  Identities=18%  Similarity=0.158  Sum_probs=205.2

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc---hH-HHHHhc-----Ccc
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GA-VSRAVE-----GCK   82 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~-~~~~~~-----~~d   82 (331)
                      |||||||||||++|+++|++.|+ +|+++.|+.......          ..+..+|+.|.   ++ +.++++     ++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence            89999999999999999999998 777766654322111          11233555543   33 233332     689


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      +|||+|+.....  ..++...++.|+.++.+|+++|++.++ +|||+||+ .+|+....  .+.+|+++..|.      +
T Consensus        71 ~Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~-~vyg~~~~--~~~~E~~~~~p~------~  138 (308)
T PRK11150         71 AIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSA-ATYGGRTD--DFIEEREYEKPL------N  138 (308)
T ss_pred             EEEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcch-HHhCcCCC--CCCccCCCCCCC------C
Confidence            999999865432  223456799999999999999999987 69999998 55654432  356777665554      4


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--C-hhHHHHHHHHcCCCCc-c-C--cCCCCceeHHHHH
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--N-ASCAVLQQLLQGSKDT-Q-E--YHWLGAVPVKDVA  235 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~-~~~~~~~~~~~~~~~~-~-~--~~~~~~v~v~D~a  235 (331)
                      +|+.+|..+|+.++.++.+.+++++++||+++|||+.....  . ....++.++..|.... . +  +..++|+|++|+|
T Consensus       139 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a  218 (308)
T PRK11150        139 VYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVA  218 (308)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHH
Confidence            89999999999999998888999999999999999864321  1 2234446677776443 2 3  3579999999999


Q ss_pred             HHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCCC---CCccccccchHHHHhhCCCc-c-CHHH
Q 020110          236 KAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGETQ---PGLIPCKDAAKRLMDLGLVF-T-PVED  309 (331)
Q Consensus       236 ~a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~k~~~lG~~~-~-~~~~  309 (331)
                      ++++.+++.. ..++||++ ++++|+.|+++.+.+.++..++........   ........|++|++.+||+| . ++++
T Consensus       219 ~a~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~g~~p~~~~~~~  297 (308)
T PRK11150        219 AVNLWFWENG-VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKLRAAGYDKPFKTVAE  297 (308)
T ss_pred             HHHHHHHhcC-CCCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccccccceecccCHHHHHhcCCCCCCCCHHH
Confidence            9999988764 35688775 566999999999999985322221111110   11223467999997789997 4 9999


Q ss_pred             HHHHHHHHHH
Q 020110          310 AVRETVESLK  319 (331)
Q Consensus       310 ~l~~~~~~~~  319 (331)
                      +|+++++|+.
T Consensus       298 gl~~~~~~~~  307 (308)
T PRK11150        298 GVAEYMAWLN  307 (308)
T ss_pred             HHHHHHHHhh
Confidence            9999999985

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=6.5e-40  Score=291.53  Aligned_cols=295  Identities=27%  Similarity=0.431  Sum_probs=217.0

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCC-----CCCcEEEEEccCCCchHHHHHhcC
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-----GDANLRVFEADVLDSGAVSRAVEG   80 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~   80 (331)
                      ..++|+||||||+||||++++++|+++|+ +|+++.|+......+..+...     ...++.++.+|++|.+++.+++++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            45678999999999999999999999999 999888875433332221100     011578899999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccc-eeccCC--CCCCccccCCCCCChhh
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSIS-AIVPNP--GWKGKVFDETSWTDLEY  156 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~-~~~~~~--~~~~~~~~E~~~~~~~~  156 (331)
                      +|+|||+|+...............+.|+.++.+++++|++. ++++|||+||.. .+|+..  .....+++|+++.....
T Consensus       129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~  208 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF  208 (367)
T ss_pred             ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence            99999999976542211122455788999999999999986 799999999964 355431  11113467776544333


Q ss_pred             hhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHH
Q 020110          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAK  236 (331)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~  236 (331)
                      +..+.++|+.+|..+|++++.++++++++++++||+++|||+......   ..+.+...+....+++..++|+||+|+|+
T Consensus       209 ~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~---~~~~~~~~g~~~~~g~g~~~~v~V~Dva~  285 (367)
T PLN02686        209 CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNS---TATIAYLKGAQEMLADGLLATADVERLAE  285 (367)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCC---hhHHHHhcCCCccCCCCCcCeEEHHHHHH
Confidence            333456899999999999999988889999999999999998543211   12234445543336666678999999999


Q ss_pred             HHHHhhcCC---CCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCC-C-CCCccccccchHHH-HhhCCCcc
Q 020110          237 AQVLLFESP---AASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGE-T-QPGLIPCKDAAKRL-MDLGLVFT  305 (331)
Q Consensus       237 a~~~~l~~~---~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~k~-~~lG~~~~  305 (331)
                      +++.+++..   ...++|+++++.++++|+++.+.+.++ .+....... . .........|++|+ +.|||+++
T Consensus       286 A~~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~d~~~~~~d~~kl~~~l~~~~~  359 (367)
T PLN02686        286 AHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIG-LPINKIAGNSSSDDTPARFELSNKKLSRLMSRTRR  359 (367)
T ss_pred             HHHHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcC-CCCCcCCCchhhcCCcccccccHHHHHHHHHHhhh
Confidence            999999752   334578888889999999999999994 333322221 2 34566778899999 88999985

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.7e-39  Score=283.37  Aligned_cols=295  Identities=27%  Similarity=0.285  Sum_probs=232.3

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc-cEEEEccc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC-KGVFHVAS   89 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-d~vih~a~   89 (331)
                      +|||||||||||++|+++|+++|+ +|++++|......... .      ++.++.+|+.+.+...+.++.. |+|||+|+
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~------~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa   73 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGH-DVRGLDRLRDGLDPLL-S------GVEFVVLDLTDRDLVDELAKGVPDAVIHLAA   73 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCC-eEEEEeCCCccccccc-c------ccceeeecccchHHHHHHHhcCCCEEEEccc
Confidence            599999999999999999999999 9999999776554433 1      6889999999998888888888 99999999


Q ss_pred             CCCCCCCCC-chhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCC-CCCChhhhhccCcchhHH
Q 020110           90 PCTLEDPVD-PEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDET-SWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        90 ~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~-~~~~~~~~~~~~~~y~~s  167 (331)
                      ......... ++...+++|+.++.+++++|++.++++|||.||.+.+++. . ...+++|+ .+..|.      ++|+.+
T Consensus        74 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~-~-~~~~~~E~~~~~~p~------~~Yg~s  145 (314)
T COG0451          74 QSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGD-P-PPLPIDEDLGPPRPL------NPYGVS  145 (314)
T ss_pred             cCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCC-C-CCCCcccccCCCCCC------CHHHHH
Confidence            877533222 3556899999999999999999999999997776555544 2 23478888 444443      379999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCC--hhHHHHHHHHcCCC-Ccc---CcCCCCceeHHHHHHHHHHh
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQGSK-DTQ---EYHWLGAVPVKDVAKAQVLL  241 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~-~~~---~~~~~~~v~v~D~a~a~~~~  241 (331)
                      |..+|+.+..+.+.++++++++||+++|||+......  ....++..+..+.+ ...   ++..++++|++|+++++..+
T Consensus       146 K~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  225 (314)
T COG0451         146 KLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLA  225 (314)
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHH
Confidence            9999999999988789999999999999999765421  23344556677775 332   24668999999999999999


Q ss_pred             hcCCCCCceEEEecc--ccCHHHHHHHHHHhCCCCCCCCCCC---CCCCCccccccchHHH-HhhCCCc-cCHHHHHHHH
Q 020110          242 FESPAASGRYLCTNG--IYQFGDFAERVSKLFPEFPVHRFDG---ETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRET  314 (331)
Q Consensus       242 l~~~~~~g~~~~~~~--~~s~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~  314 (331)
                      ++++... .|++++.  ..+++|+++.+.+.++.........   ...........|.+++ +.|||.| .++++++.++
T Consensus       226 ~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~  304 (314)
T COG0451         226 LENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADT  304 (314)
T ss_pred             HhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHH
Confidence            9988666 8877654  6899999999999985432211111   1223445678899999 7899999 5999999999


Q ss_pred             HHHHHHcC
Q 020110          315 VESLKAKG  322 (331)
Q Consensus       315 ~~~~~~~~  322 (331)
                      ++|+....
T Consensus       305 ~~~~~~~~  312 (314)
T COG0451         305 LEWLLKKL  312 (314)
T ss_pred             HHHHHHhh
Confidence            99997654

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=1.7e-39  Score=287.52  Aligned_cols=301  Identities=17%  Similarity=0.153  Sum_probs=219.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch-hhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      |+|||||||||||++|+++|+++|+ +|++++|....... ........+.++.++.+|++|.+.+.++++  ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGH-DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence            4899999999999999999999999 99998764322111 111100011156788999999999988886  5899999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCC-ChhhhhccCcchh
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT-DLEYCKSRKKWYP  165 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~-~~~~~~~~~~~y~  165 (331)
                      +|+..........+...+++|+.++.++++++++.++++||++||+ .+|+...  ..+++|+++. .|.      ..|+
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~-~~yg~~~--~~~~~E~~~~~~p~------~~Y~  150 (338)
T PRK10675         80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSA-TVYGDQP--KIPYVESFPTGTPQ------SPYG  150 (338)
T ss_pred             CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccH-HhhCCCC--CCccccccCCCCCC------ChhH
Confidence            9987553223344577899999999999999999999999999997 4555433  2568888765 333      4899


Q ss_pred             HHHHHHHHHHHHHHHHc-CCeEEEEcCCcccCCCCCCC--------CChhHHHHHHHHcCCC--Cc---------cCcCC
Q 020110          166 VSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGSK--DT---------QEYHW  225 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~--~~---------~~~~~  225 (331)
                      .+|..+|++++.++++. +++++++|++++||+.....        ...+...+.++..+..  +.         .+.+.
T Consensus       151 ~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  230 (338)
T PRK10675        151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV  230 (338)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEE
Confidence            99999999999987654 79999999999999752110        0112233444444322  11         23467


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCC-ceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCC-CCCCCccccccchHHH-Hh
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AAS-GRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDG-ETQPGLIPCKDAAKRL-MD  299 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~-g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~k~-~~  299 (331)
                      ++|+|++|+|++++.+++..  ... ++||++ ++.+|+.|+++.+.+.++ .+++.... ...........|++|+ +.
T Consensus       231 ~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~k~~~~  309 (338)
T PRK10675        231 RDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACG-KPVNYHFAPRREGDLPAYWADASKADRE  309 (338)
T ss_pred             EeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhC-CCCCeeeCCCCCCchhhhhcCHHHHHHH
Confidence            99999999999999998752  223 478765 667999999999999984 33332211 1112233456799999 78


Q ss_pred             hCCCc-cCHHHHHHHHHHHHHHc
Q 020110          300 LGLVF-TPVEDAVRETVESLKAK  321 (331)
Q Consensus       300 lG~~~-~~~~~~l~~~~~~~~~~  321 (331)
                      +||+| .+++++|+++++|++++
T Consensus       310 lg~~p~~~~~~~~~~~~~~~~~~  332 (338)
T PRK10675        310 LNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_pred             hCCCCcCcHHHHHHHHHHHHHhh
Confidence            99999 59999999999999875

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=1.5e-39  Score=281.98  Aligned_cols=273  Identities=16%  Similarity=0.131  Sum_probs=208.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~   87 (331)
                      |+||||||+||||++|+++|++.|  +|++++|...                 .+.+|++|.+.+.++++  ++|+||||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g--~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~   61 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG--NLIALDVHST-----------------DYCGDFSNPEGVAETVRKIRPDVIVNA   61 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC--CEEEeccccc-----------------cccCCCCCHHHHHHHHHhcCCCEEEEC
Confidence            489999999999999999999988  4777776421                 24589999999999887  58999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |+......+..++...+++|+.++.+|+++|++.++ +|||+||. .+|+...  ..|++|+++..|.      +.|+.+
T Consensus        62 Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~-~Vy~~~~--~~p~~E~~~~~P~------~~Yg~s  131 (299)
T PRK09987         62 AAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTD-YVFPGTG--DIPWQETDATAPL------NVYGET  131 (299)
T ss_pred             CccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccc-eEECCCC--CCCcCCCCCCCCC------CHHHHH
Confidence            998877656666788889999999999999999986 79999997 4565443  2578998877665      489999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCc----CCCCceeHHHHHHHHHHhh
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEY----HWLGAVPVKDVAKAQVLLF  242 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~v~v~D~a~a~~~~l  242 (331)
                      |..+|+++..+    ..+.+++|++++|||+..   .....++..+..++++. +++    ..+++.+++|+++++..++
T Consensus       132 K~~~E~~~~~~----~~~~~ilR~~~vyGp~~~---~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~  204 (299)
T PRK09987        132 KLAGEKALQEH----CAKHLIFRTSWVYAGKGN---NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVAL  204 (299)
T ss_pred             HHHHHHHHHHh----CCCEEEEecceecCCCCC---CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhh
Confidence            99999999754    346799999999999743   34556666666676655 343    3455667788888888777


Q ss_pred             cCCCCCceEEEe-ccccCHHHHHHHHHHhCC--CCCCC-----CCC----CCCCCCccccccchHHH-HhhCCCccCHHH
Q 020110          243 ESPAASGRYLCT-NGIYQFGDFAERVSKLFP--EFPVH-----RFD----GETQPGLIPCKDAAKRL-MDLGLVFTPVED  309 (331)
Q Consensus       243 ~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~--~~~~~-----~~~----~~~~~~~~~~~~~~~k~-~~lG~~~~~~~~  309 (331)
                      ......|+||++ ++..|+.|+++.|.+.++  +.+.+     ...    ........+..+|++|+ +.+||+++++++
T Consensus       205 ~~~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~~~~~  284 (299)
T PRK09987        205 NKPEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPDWQV  284 (299)
T ss_pred             ccCCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCccHHH
Confidence            655455788765 567999999999977532  11111     000    01112445678899999 679999999999


Q ss_pred             HHHHHHHHH
Q 020110          310 AVRETVESL  318 (331)
Q Consensus       310 ~l~~~~~~~  318 (331)
                      +|+++++.+
T Consensus       285 ~l~~~~~~~  293 (299)
T PRK09987        285 GVKRMLTEL  293 (299)
T ss_pred             HHHHHHHHH
Confidence            999999765

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=1e-39  Score=285.10  Aligned_cols=283  Identities=19%  Similarity=0.178  Sum_probs=211.1

Q ss_pred             EEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEEcccC
Q 020110           13 CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHVASP   90 (331)
Q Consensus        13 lVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~a~~   90 (331)
                      ||||||||||++|+++|++.|+ +|+++.+.                    ..+|+.+.+++.++++  ++|+|||+|+.
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~-~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~   59 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGF-TNLVLRTH--------------------KELDLTRQADVEAFFAKEKPTYVILAAAK   59 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCC-cEEEeecc--------------------ccCCCCCHHHHHHHHhccCCCEEEEeeee
Confidence            6999999999999999999999 77765321                    1489999999998876  47999999997


Q ss_pred             CCC-CCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccC-cchhHHH
Q 020110           91 CTL-EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK-KWYPVSK  168 (331)
Q Consensus        91 ~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~-~~y~~sK  168 (331)
                      ... ......+...++.|+.++.+++++|++.++++|||+||+ .+|+...  ..+++|+++....  ..+. ..|+.+|
T Consensus        60 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~-~vyg~~~--~~~~~E~~~~~~~--~~p~~~~Y~~sK  134 (306)
T PLN02725         60 VGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSS-CIYPKFA--PQPIPETALLTGP--PEPTNEWYAIAK  134 (306)
T ss_pred             ecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCce-eecCCCC--CCCCCHHHhccCC--CCCCcchHHHHH
Confidence            543 223345677899999999999999999999999999997 4565433  3678887643211  1121 2599999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHH----HHHcCCCCc--c--CcCCCCceeHHHHHHH
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQ----QLLQGSKDT--Q--EYHWLGAVPVKDVAKA  237 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~----~~~~~~~~~--~--~~~~~~~v~v~D~a~a  237 (331)
                      ..+|++++.+.+..+++++++||+.+|||+....   ...+..++.    +...+.++.  +  +++.++|+|++|++++
T Consensus       135 ~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~  214 (306)
T PLN02725        135 IAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADA  214 (306)
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHH
Confidence            9999999999888899999999999999975311   112223332    334455443  2  4578899999999999


Q ss_pred             HHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCC-CCCCCCccccccchHHHHhhCCCc-cCHHHHHHHH
Q 020110          238 QVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFD-GETQPGLIPCKDAAKRLMDLGLVF-TPVEDAVRET  314 (331)
Q Consensus       238 ~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~lG~~~-~~~~~~l~~~  314 (331)
                      ++.+++.....+.||++ +..+|+.|+++.+++.++ .+..... ...........+|++|++.+||+| .+++++|+++
T Consensus       215 ~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~  293 (306)
T PLN02725        215 VVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVG-FEGELVWDTSKPDGTPRKLMDSSKLRSLGWDPKFSLKDGLQET  293 (306)
T ss_pred             HHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhC-CCCceeecCCCCCcccccccCHHHHHHhCCCCCCCHHHHHHHH
Confidence            99999875455667665 567999999999999984 3221111 111112234567999997799999 5999999999


Q ss_pred             HHHHHHcC
Q 020110          315 VESLKAKG  322 (331)
Q Consensus       315 ~~~~~~~~  322 (331)
                      ++|++++.
T Consensus       294 ~~~~~~~~  301 (306)
T PLN02725        294 YKWYLENY  301 (306)
T ss_pred             HHHHHhhh
Confidence            99998763

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=8.3e-39  Score=277.19  Aligned_cols=284  Identities=31%  Similarity=0.489  Sum_probs=214.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch---hhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH---LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .++|||||||||||++++++|+++|+ +|+++.|+......   +..+..... +++++.+|++|.+++.+++.++|+|+
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~~~~~l~~~d~v~   83 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGY-TVHAAVQKNGETEIEKEIRGLSCEEE-RLKVFDVDPLDYHSILDALKGCSGLF   83 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEEcCchhhhHHHHHHhcccCCC-ceEEEEecCCCHHHHHHHHcCCCEEE
Confidence            46899999999999999999999999 99999986432211   122211112 68899999999999999999999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceeccC-CC-CCCccccCCCCCChhhhhccCc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPN-PG-WKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~-~~-~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      |+++.....  .......+++|+.++.+++++|.+. +++++|++||..+++.. .. ....+++|+++..+.+...+..
T Consensus        84 ~~~~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  161 (297)
T PLN02583         84 CCFDPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL  161 (297)
T ss_pred             EeCccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence            987644321  2235678999999999999999886 68999999998665422 11 1234688888766655444455


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhh
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF  242 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l  242 (331)
                      +|+.+|..+|+.++.++++.+++++++||++||||......        ....+.....++..++||||+|+|++++.++
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~--------~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al  233 (297)
T PLN02583        162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN--------PYLKGAAQMYENGVLVTVDVNFLVDAHIRAF  233 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch--------hhhcCCcccCcccCcceEEHHHHHHHHHHHh
Confidence            79999999999999998888999999999999999764321        1222322223445678999999999999999


Q ss_pred             cCCCCCceEEEeccccC-HHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHHHhhCCCc
Q 020110          243 ESPAASGRYLCTNGIYQ-FGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVF  304 (331)
Q Consensus       243 ~~~~~~g~~~~~~~~~s-~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~  304 (331)
                      +.+...++|++.++..+ +.++++++.+.+|..+.+....+.........++++|+++||+++
T Consensus       234 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~~~  296 (297)
T PLN02583        234 EDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPYEMQGSEVYQQRIRNKKLNKLMEDF  296 (297)
T ss_pred             cCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCCcccccCCCccccccChHHHHHhCccc
Confidence            98877779999887655 678999999999988766432111122344678899999999875

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1.4e-38  Score=271.44  Aligned_cols=250  Identities=30%  Similarity=0.352  Sum_probs=186.6

Q ss_pred             EEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccc--hhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           13 CVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        13 lVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |||||+||||++|+++|+++|  + +|.++++.+....  .....    + ..+++++|++|++++.++++++|+|||+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~-~Vr~~d~~~~~~~~~~~~~~----~-~~~~~~~Di~d~~~l~~a~~g~d~V~H~A   74 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIY-EVRVLDRSPPPKFLKDLQKS----G-VKEYIQGDITDPESLEEALEGVDVVFHTA   74 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCce-EEEEcccccccccchhhhcc----c-ceeEEEeccccHHHHHHHhcCCceEEEeC
Confidence            699999999999999999999  6 9999987665432  11111    1 33499999999999999999999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC-CCccccCCCCCChhhhhccCcchhHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~-~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      +...... ....+.++++|+.||++++++|++.++++|||+||.+++..+... +-...+|+.+..    ..+.+.|+.|
T Consensus        75 a~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~----~~~~~~Y~~S  149 (280)
T PF01073_consen   75 APVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYP----SSPLDPYAES  149 (280)
T ss_pred             ccccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCccc----ccccCchHHH
Confidence            9866532 345678999999999999999999999999999999777653322 111124443322    2245689999


Q ss_pred             HHHHHHHHHHHHH---H--cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCC-Cc--cCcCCCCceeHHHHHHHHH
Q 020110          168 KTLAEKAAWEFAE---K--HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-DT--QEYHWLGAVPVKDVAKAQV  239 (331)
Q Consensus       168 K~~~e~~~~~~~~---~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~v~v~D~a~a~~  239 (331)
                      |..+|++++++..   +  ..+.+++|||+.||||++.....   .+......|.. ..  .++...+++||+|+|++++
T Consensus       150 K~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~---~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahv  226 (280)
T PF01073_consen  150 KALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVP---RLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHV  226 (280)
T ss_pred             HHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccc---hhhHHHHhcccceeecCCCceECcEeHHHHHHHHH
Confidence            9999999998764   2  24999999999999998754322   23333444422 22  3446799999999999998


Q ss_pred             HhhcC-------CCCCc-eEEEe-ccccC-HHHHHHHHHHhCCCCCCC
Q 020110          240 LLFES-------PAASG-RYLCT-NGIYQ-FGDFAERVSKLFPEFPVH  277 (331)
Q Consensus       240 ~~l~~-------~~~~g-~~~~~-~~~~s-~~e~~~~i~~~~~~~~~~  277 (331)
                      ++.+.       ....| .|+++ +++.. +.||...+.+.+ +.+.+
T Consensus       227 lA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~-G~~~~  273 (280)
T PF01073_consen  227 LAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEAL-GYPPP  273 (280)
T ss_pred             HHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHC-CCCCC
Confidence            87653       22345 67665 46677 999999999999 54444

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=7.8e-39  Score=263.74  Aligned_cols=301  Identities=20%  Similarity=0.194  Sum_probs=237.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC-CCccchhh---cCCCCCCCcEEEEEccCCCchHHHHHhcC--ccE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLF---ALPGAGDANLRVFEADVLDSGAVSRAVEG--CKG   83 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~-~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   83 (331)
                      ++||||||+||||+|.+-+|++.|+ .|++++.= ..-...+.   .+..... .+.++++|++|.+.++++++.  .|.
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy-~v~~vDNl~n~~~~sl~r~~~l~~~~~-~v~f~~~Dl~D~~~L~kvF~~~~fd~   80 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGY-GVVIVDNLNNSYLESLKRVRQLLGEGK-SVFFVEGDLNDAEALEKLFSEVKFDA   80 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCC-cEEEEecccccchhHHHHHHHhcCCCC-ceEEEEeccCCHHHHHHHHhhcCCce
Confidence            6899999999999999999999999 99988751 12122222   2222223 899999999999999999975  799


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCC-hhhhhccCc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD-LEYCKSRKK  162 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~-~~~~~~~~~  162 (331)
                      |+|+|+........++|..++..|+.++.+|++.+++++++.+|+.||+ .+|+.+..  -|++|+++.. |.      +
T Consensus        81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssa-tvYG~p~~--ip~te~~~t~~p~------~  151 (343)
T KOG1371|consen   81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSA-TVYGLPTK--VPITEEDPTDQPT------N  151 (343)
T ss_pred             EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecce-eeecCcce--eeccCcCCCCCCC------C
Confidence            9999999888777788899999999999999999999999999998876 78887775  7899999887 54      5


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC--CCCC-------ChhHHHHHHHH---------cCCCCc--cC
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM--QPYL-------NASCAVLQQLL---------QGSKDT--QE  222 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~--~~~~-------~~~~~~~~~~~---------~~~~~~--~~  222 (331)
                      +|+.+|...|+++..+.+..+..++.||.++++|...  ..+.       +..+ .+.+..         -|....  .|
T Consensus       152 pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~t~dg  230 (343)
T KOG1371|consen  152 PYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYTTIDG  230 (343)
T ss_pred             cchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCcccccCC
Confidence            9999999999999999988899999999999999322  1110       0111 111211         122222  35


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCCCCC---ceEE-EeccccCHHHHHHHHHHhCCCCCCCCCCCC-CCCCccccccchHHH
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESPAAS---GRYL-CTNGIYQFGDFAERVSKLFPEFPVHRFDGE-TQPGLIPCKDAAKRL  297 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~~~~---g~~~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~  297 (331)
                      +..++++|+-|.|+....++......   ++|| +++.+.++.+|++++.+.. +..++..... +..+......+.+++
T Consensus       231 t~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~-g~~~k~~~v~~R~gdv~~~ya~~~~a  309 (343)
T KOG1371|consen  231 TIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKAL-GVKIKKKVVPRRNGDVAFVYANPSKA  309 (343)
T ss_pred             CeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHh-cCCCCccccCCCCCCceeeeeChHHH
Confidence            68899999999999999999876542   3675 5677889999999999999 4444443332 345666788899998


Q ss_pred             -HhhCCCc-cCHHHHHHHHHHHHHHcCC
Q 020110          298 -MDLGLVF-TPVEDAVRETVESLKAKGF  323 (331)
Q Consensus       298 -~~lG~~~-~~~~~~l~~~~~~~~~~~~  323 (331)
                       ++|||++ +++++++++.++|..++..
T Consensus       310 ~~elgwk~~~~iee~c~dlw~W~~~np~  337 (343)
T KOG1371|consen  310 QRELGWKAKYGLQEMLKDLWRWQKQNPS  337 (343)
T ss_pred             HHHhCCccccCHHHHHHHHHHHHhcCCC
Confidence             9999999 6999999999999988754

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=2.4e-37  Score=267.55  Aligned_cols=268  Identities=19%  Similarity=0.190  Sum_probs=208.9

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc--cEEEEcc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC--KGVFHVA   88 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~vih~a   88 (331)
                      +|||||||||||++++++|+++|+ +|++++|.                     .+|+.+.+++.++++++  |+|||+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~-~v~~~~r~---------------------~~d~~~~~~~~~~~~~~~~d~vi~~a   58 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGR-VVVALTSS---------------------QLDLTDPEALERLLRAIRPDAVVNTA   58 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCC-EEEEeCCc---------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence            589999999999999999999999 99998774                     37899999999999865  9999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      +..........+...++.|+.++.++++++++.+. +|||+||. .+|+...  ..+++|+++.+|.      +.|+.+|
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~-~vy~~~~--~~~~~E~~~~~~~------~~Y~~~K  128 (287)
T TIGR01214        59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTD-YVFDGEG--KRPYREDDATNPL------NVYGQSK  128 (287)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeee-eeecCCC--CCCCCCCCCCCCc------chhhHHH
Confidence            97654333344677899999999999999998875 89999997 5554433  2678888876654      4899999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHhhcCC-C
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESP-A  246 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~~~-~  246 (331)
                      ..+|+.++.    .+.+++++||+++||+....  .....++..+..+.++. .+++.++++|++|+|+++..++..+ .
T Consensus       129 ~~~E~~~~~----~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~  202 (287)
T TIGR01214       129 LAGEQAIRA----AGPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLAR  202 (287)
T ss_pred             HHHHHHHHH----hCCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccC
Confidence            999999874    36899999999999998432  33445566666666555 5667899999999999999999876 3


Q ss_pred             CCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCC-------C----CCCCCCccccccchHHH-HhhCCCccCHHHHHHH
Q 020110          247 ASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRF-------D----GETQPGLIPCKDAAKRL-MDLGLVFTPVEDAVRE  313 (331)
Q Consensus       247 ~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~k~-~~lG~~~~~~~~~l~~  313 (331)
                      ..++||++ ++.+|+.|+++.+.+.++.......       .    ...........+|++|+ +.|||++++++++|.+
T Consensus       203 ~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~~~~~~~l~~  282 (287)
T TIGR01214       203 ARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPLPHWREALRA  282 (287)
T ss_pred             CCCeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCCCccHHHHHHH
Confidence            56688665 5779999999999999853321100       0    00011224467899999 7799977899999998


Q ss_pred             HHH
Q 020110          314 TVE  316 (331)
Q Consensus       314 ~~~  316 (331)
                      +++
T Consensus       283 ~~~  285 (287)
T TIGR01214       283 YLQ  285 (287)
T ss_pred             HHh
Confidence            875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=2.6e-37  Score=270.88  Aligned_cols=288  Identities=19%  Similarity=0.169  Sum_probs=210.8

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----CccEEEEc
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCKGVFHV   87 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vih~   87 (331)
                      |||||||||||++++++|+++|+.+|++++|..... .+.+.      ....+..|+.+.+.++.+.+    ++|+|||+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~   73 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNL------ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQ   73 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhh------hheeeeccCcchhHHHHHHhhccCCCCEEEEC
Confidence            699999999999999999999963688777654322 11111      22356688888877776654    79999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |+....  ...++...+++|+.++.+++++|++.++ +|||+||+ .+|+...   .+++|+++..     .+.+.|+.+
T Consensus        74 A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~-~vy~~~~---~~~~e~~~~~-----~p~~~Y~~s  141 (314)
T TIGR02197        74 GACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSA-ATYGDGE---AGFREGRELE-----RPLNVYGYS  141 (314)
T ss_pred             ccccCc--cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccH-HhcCCCC---CCcccccCcC-----CCCCHHHHH
Confidence            997543  2345677899999999999999999886 79999997 5665443   3466665432     123489999


Q ss_pred             HHHHHHHHHHHHH--HcCCeEEEEcCCcccCCCCCCC--C-ChhHHHHHHHHcCCCCc---------cCcCCCCceeHHH
Q 020110          168 KTLAEKAAWEFAE--KHGVDVVAIHPATCLGPLMQPY--L-NASCAVLQQLLQGSKDT---------QEYHWLGAVPVKD  233 (331)
Q Consensus       168 K~~~e~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~--~-~~~~~~~~~~~~~~~~~---------~~~~~~~~v~v~D  233 (331)
                      |..+|.+++.+..  ..+++++++||+.+|||+....  . ..+..++.++..+.++.         .|++.++|+|++|
T Consensus       142 K~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  221 (314)
T TIGR02197       142 KFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKD  221 (314)
T ss_pred             HHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHH
Confidence            9999999987643  2367999999999999985422  1 23445566666666543         2346789999999


Q ss_pred             HHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCC-CCCCCCCCC---CCccccccchHHH-HhhCCCc-cC
Q 020110          234 VAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFP-VHRFDGETQ---PGLIPCKDAAKRL-MDLGLVF-TP  306 (331)
Q Consensus       234 ~a~a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~k~-~~lG~~~-~~  306 (331)
                      +++++..++.. ...++||++ ++++|++|+++.+.+.++... +.....+..   ........|++|+ +.+||+| .+
T Consensus       222 ~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~~  300 (314)
T TIGR02197       222 VVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYGPFTT  300 (314)
T ss_pred             HHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCCCCccc
Confidence            99999999987 456688765 567999999999999985221 111111111   1223456899999 7789999 69


Q ss_pred             HHHHHHHHHHHHH
Q 020110          307 VEDAVRETVESLK  319 (331)
Q Consensus       307 ~~~~l~~~~~~~~  319 (331)
                      ++++++++++|++
T Consensus       301 l~~~l~~~~~~~~  313 (314)
T TIGR02197       301 LEEGVKDYVQWLL  313 (314)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=5.5e-37  Score=270.34  Aligned_cols=298  Identities=19%  Similarity=0.156  Sum_probs=217.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEEc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~   87 (331)
                      +|||||||||||++++++|+++|+ +|++++|..... ........ .. +++++.+|+.+++++.++++  ++|+|||+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~-~V~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~   77 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGH-EVVVLDNLSNGSPEALKRGER-IT-RVTFVEGDLRDRELLDRLFEEHKIDAVIHF   77 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCC-eEEEEeCCCccchhhhhhhcc-cc-ceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            589999999999999999999999 998876533221 11111111 11 57788999999999998886  58999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |+.........++...++.|+.++.++++++.+.+++++|++||. .+|+....  .+++|+++..|.      +.|+.+
T Consensus        78 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~-~~~g~~~~--~~~~e~~~~~~~------~~y~~s  148 (328)
T TIGR01179        78 AGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSA-AVYGEPSS--IPISEDSPLGPI------NPYGRS  148 (328)
T ss_pred             ccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecch-hhcCCCCC--CCccccCCCCCC------CchHHH
Confidence            997654333445667889999999999999999988999999987 45544332  467888766554      489999


Q ss_pred             HHHHHHHHHHHHHH-cCCeEEEEcCCcccCCCCCCC-------CC-hhHHHHHHHH-cCCCC-------c--cCcCCCCc
Q 020110          168 KTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPY-------LN-ASCAVLQQLL-QGSKD-------T--QEYHWLGA  228 (331)
Q Consensus       168 K~~~e~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~-------~~-~~~~~~~~~~-~~~~~-------~--~~~~~~~~  228 (331)
                      |..+|.+++.++++ .+++++++||+.+||+.....       .. .+..+..... ....+       .  .++..++|
T Consensus       149 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  228 (328)
T TIGR01179       149 KLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDY  228 (328)
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEee
Confidence            99999999998877 799999999999999864221       11 1222222222 11211       1  23467899


Q ss_pred             eeHHHHHHHHHHhhcCC---CCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCC-CCCCCCccccccchHHH-HhhCC
Q 020110          229 VPVKDVAKAQVLLFESP---AASGRYLC-TNGIYQFGDFAERVSKLFPEFPVHRFD-GETQPGLIPCKDAAKRL-MDLGL  302 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~---~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~-~~lG~  302 (331)
                      ||++|+++++..++...   ...++|++ +++++|++|+++.+++.++ .+.+... ............|++++ +.|||
T Consensus       229 v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~  307 (328)
T TIGR01179       229 IHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSG-VDFPVELAPRRPGDPASLVADASKIRRELGW  307 (328)
T ss_pred             eeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhC-CCcceEeCCCCCccccchhcchHHHHHHhCC
Confidence            99999999999988753   23357877 4567999999999999994 4433211 11112223455789999 77999


Q ss_pred             Cc-cC-HHHHHHHHHHHHHHc
Q 020110          303 VF-TP-VEDAVRETVESLKAK  321 (331)
Q Consensus       303 ~~-~~-~~~~l~~~~~~~~~~  321 (331)
                      +| .+ ++++|+++++|++++
T Consensus       308 ~p~~~~l~~~~~~~~~~~~~~  328 (328)
T TIGR01179       308 QPKYTDLEIIIKTAWRWESRN  328 (328)
T ss_pred             CCCcchHHHHHHHHHHHHhcC
Confidence            99 45 999999999999875

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=5.9e-37  Score=268.54  Aligned_cols=271  Identities=18%  Similarity=0.130  Sum_probs=205.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      +|+||||||+||||++++++|++.|  + +|++++|+......+..... .. ++.++.+|++|++++.++++++|+|||
T Consensus         4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~-~V~~~~r~~~~~~~~~~~~~-~~-~~~~v~~Dl~d~~~l~~~~~~iD~Vih   80 (324)
T TIGR03589         4 NKSILITGGTGSFGKAFISRLLENYNPK-KIIIYSRDELKQWEMQQKFP-AP-CLRFFIGDVRDKERLTRALRGVDYVVH   80 (324)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhCCCc-EEEEEcCChhHHHHHHHHhC-CC-cEEEEEccCCCHHHHHHHHhcCCEEEE
Confidence            5799999999999999999999986  6 89999887544322221111 11 688999999999999999999999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +||.........++...+++|+.++.++++++++.++++||++||....                 .|      .++|+.
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~-----------------~p------~~~Y~~  137 (324)
T TIGR03589        81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA-----------------NP------INLYGA  137 (324)
T ss_pred             CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC-----------------CC------CCHHHH
Confidence            9997654333445678999999999999999999999999999985211                 11      137999


Q ss_pred             HHHHHHHHHHHHH---HHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCC-CCc--cCcCCCCceeHHHHHHHHHH
Q 020110          167 SKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDT--QEYHWLGAVPVKDVAKAQVL  240 (331)
Q Consensus       167 sK~~~e~~~~~~~---~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~v~v~D~a~a~~~  240 (331)
                      +|..+|.+++.++   ..+|++++++||+++|||+.    ..+..+......+. +++  .+++.++|+|++|++++++.
T Consensus       138 sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~  213 (324)
T TIGR03589       138 TKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG----SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLK  213 (324)
T ss_pred             HHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC----CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHH
Confidence            9999999987754   35789999999999999863    23445555555564 344  34577999999999999999


Q ss_pred             hhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHH-HhhCCCc-cCHHHHHH
Q 020110          241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVR  312 (331)
Q Consensus       241 ~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~  312 (331)
                      +++....+.+|++++...++.|+++.+.+..+....+....+   .......|.+++ +.|||+| .++++++.
T Consensus       214 al~~~~~~~~~~~~~~~~sv~el~~~i~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~lg~~~~~~l~~~~~  284 (324)
T TIGR03589       214 SLERMLGGEIFVPKIPSMKITDLAEAMAPECPHKIVGIRPGE---KLHEVMITEDDARHTYELGDYYAILPSIS  284 (324)
T ss_pred             HHhhCCCCCEEccCCCcEEHHHHHHHHHhhCCeeEeCCCCCc---hhHhhhcChhhhhhhcCCCCeEEEccccc
Confidence            998653333677666779999999999997632111111111   123355799999 8899999 59999986

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=7.1e-36  Score=247.22  Aligned_cols=267  Identities=21%  Similarity=0.199  Sum_probs=221.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEEEcc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFHVA   88 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vih~a   88 (331)
                      +|||||++|++|++|++.|. .++ +|++++|..                     .|++|++.+.+++.+  +|+|||+|
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~-~v~a~~~~~---------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEF-EVIATDRAE---------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCc-eEEeccCcc---------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            59999999999999999998 667 999987642                     899999999999974  79999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      ++..++.++.+++..+.+|..++.+++++|++.|. ++||+||.+++-|..   +.|+.|++..+|..      .||.||
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~---~~~Y~E~D~~~P~n------vYG~sK  128 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEK---GGPYKETDTPNPLN------VYGRSK  128 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCC---CCCCCCCCCCCChh------hhhHHH
Confidence            99999999999999999999999999999999997 699999985544433   37899999988874      899999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHhhcCCCC
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESPAA  247 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~~~~~  247 (331)
                      +.+|..++    +.+-+.+|+|.+++||...   .++...+++....|+++. ..|+..+.+++.|+|+++..++.....
T Consensus       129 l~GE~~v~----~~~~~~~I~Rtswv~g~~g---~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~  201 (281)
T COG1091         129 LAGEEAVR----AAGPRHLILRTSWVYGEYG---NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKE  201 (281)
T ss_pred             HHHHHHHH----HhCCCEEEEEeeeeecCCC---CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcccc
Confidence            99999998    4568899999999999874   345666677777787777 677999999999999999999998878


Q ss_pred             CceEEEeccc-cCHHHHHHHHHHhCCCCC-C--CCCCC--CCC-CCccccccchHHH-HhhCCCccCHHHHHHHHHHH
Q 020110          248 SGRYLCTNGI-YQFGDFAERVSKLFPEFP-V--HRFDG--ETQ-PGLIPCKDAAKRL-MDLGLVFTPVEDAVRETVES  317 (331)
Q Consensus       248 ~g~~~~~~~~-~s~~e~~~~i~~~~~~~~-~--~~~~~--~~~-~~~~~~~~~~~k~-~~lG~~~~~~~~~l~~~~~~  317 (331)
                      .|+|++++.. .||.|+++.|.+.++... +  +....  +.. ....+..+++.|+ +.+|+++++++++++.+++.
T Consensus       202 ~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~~w~~~l~~~~~~  279 (281)
T COG1091         202 GGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLPEWREALKALLDE  279 (281)
T ss_pred             CcEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCccHHHHHHHHHhh
Confidence            8899776644 799999999999984111 1  11111  111 2334567899999 77999999999999998764

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=4.2e-38  Score=270.14  Aligned_cols=270  Identities=23%  Similarity=0.247  Sum_probs=196.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vih~   87 (331)
                      ||||||||+|+||++|.++|.+.|+ +|+++.|.                     ..|+.|.+++.+.+++  +|+||||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~-~v~~~~r~---------------------~~dl~d~~~~~~~~~~~~pd~Vin~   58 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGY-EVIATSRS---------------------DLDLTDPEAVAKLLEAFKPDVVINC   58 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSE-EEEEESTT---------------------CS-TTSHHHHHHHHHHH--SEEEE-
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCC-EEEEeCch---------------------hcCCCCHHHHHHHHHHhCCCeEecc
Confidence            5999999999999999999999999 99998665                     3889999999998864  8999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      ||...++.+..++...+++|+.++.+|+++|...+. ++||+||.. +|+...  ..|++|+++..|.      +.||.+
T Consensus        59 aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~-VFdG~~--~~~y~E~d~~~P~------~~YG~~  128 (286)
T PF04321_consen   59 AAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDY-VFDGDK--GGPYTEDDPPNPL------NVYGRS  128 (286)
T ss_dssp             -----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGG-GS-SST--SSSB-TTS----S------SHHHHH
T ss_pred             ceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccE-EEcCCc--ccccccCCCCCCC------CHHHHH
Confidence            999887777788999999999999999999999986 799999984 444333  3679999988776      489999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      |+++|+.++..    .-+.+|+|++.+||+..   .++...++..+..++.+. ..+..++++|++|+|+++..+++...
T Consensus       129 K~~~E~~v~~~----~~~~~IlR~~~~~g~~~---~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~  201 (286)
T PF04321_consen  129 KLEGEQAVRAA----CPNALILRTSWVYGPSG---RNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNL  201 (286)
T ss_dssp             HHHHHHHHHHH-----SSEEEEEE-SEESSSS---SSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh----cCCEEEEecceecccCC---CchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcc
Confidence            99999999853    34899999999999932   246667777788888777 66788999999999999999998754


Q ss_pred             C----CceEEE-eccccCHHHHHHHHHHhCCCCCC---CCCCCC---CCCCccccccchHHH-HhhCCCccCHHHHHHHH
Q 020110          247 A----SGRYLC-TNGIYQFGDFAERVSKLFPEFPV---HRFDGE---TQPGLIPCKDAAKRL-MDLGLVFTPVEDAVRET  314 (331)
Q Consensus       247 ~----~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~k~-~~lG~~~~~~~~~l~~~  314 (331)
                      .    .|+|++ +++.+|+.|+++.+++.++....   +....+   ......+..+|++|+ +.+|+++++++++|+++
T Consensus       202 ~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~~~~~~l~~~  281 (286)
T PF04321_consen  202 SGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPPPWREGLEEL  281 (286)
T ss_dssp             H-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS---BHHHHHHHH
T ss_pred             cccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCcCHHHHHHHH
Confidence            3    588865 55679999999999999853221   111111   113455678999999 67899999999999999


Q ss_pred             HHHH
Q 020110          315 VESL  318 (331)
Q Consensus       315 ~~~~  318 (331)
                      ++.|
T Consensus       282 ~~~~  285 (286)
T PF04321_consen  282 VKQY  285 (286)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8765

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=3.9e-36  Score=257.35  Aligned_cols=305  Identities=25%  Similarity=0.259  Sum_probs=227.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      +|.+++||||+||+|+||+++|++.+  . +|++++..+.......+........++++.+|+.+...+.+.++++ .|+
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~-~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv   80 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKL-EIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV   80 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhccccc-EEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence            35699999999999999999999998  6 9999987665332222222112228999999999999999999999 999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      |+|+.........+++..+++|+.||.+++++|++.+++++||+||..++++....  ..-+|+.+ .|   ......|+
T Consensus        81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~--~n~~E~~p-~p---~~~~d~Y~  154 (361)
T KOG1430|consen   81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPI--INGDESLP-YP---LKHIDPYG  154 (361)
T ss_pred             EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeec--ccCCCCCC-Cc---cccccccc
Confidence            99987776666667899999999999999999999999999999999888765442  22333332 22   11224899


Q ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHHHHHhh
Q 020110          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQVLLF  242 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a~~~~l  242 (331)
                      .||..+|+++++.+...++..++|||+.||||++...   ...++.-+..|..+. .  ++...|+++++.++.+.+++.
T Consensus       155 ~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~---~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~  231 (361)
T KOG1430|consen  155 ESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRL---LPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAA  231 (361)
T ss_pred             hHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccc---cHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHH
Confidence            9999999999998766679999999999999997643   334444455555433 3  347889999999999887654


Q ss_pred             c-----CCCCCc-eEEEe-ccccCHHHHHHHHHHhCCCCCCCC-CC--------------------C-CCC--------C
Q 020110          243 E-----SPAASG-RYLCT-NGIYQFGDFAERVSKLFPEFPVHR-FD--------------------G-ETQ--------P  285 (331)
Q Consensus       243 ~-----~~~~~g-~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~-~~--------------------~-~~~--------~  285 (331)
                      .     ++...| .|+++ +.++...++...+.+.+ +...+. +.                    . ..+        .
T Consensus       232 ~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~l-g~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~  310 (361)
T KOG1430|consen  232 RALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKAL-GYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVAL  310 (361)
T ss_pred             HHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhc-CCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheee
Confidence            3     344566 56655 56676666666888887 333331 10                    0 011        1


Q ss_pred             CccccccchHHH-HhhCCCc-cCHHHHHHHHHHHHHHcCCC
Q 020110          286 GLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVESLKAKGFL  324 (331)
Q Consensus       286 ~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~~~~~~~  324 (331)
                      ......++..|+ +.|||.| .++++++.+++.|+......
T Consensus       311 ~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~~~  351 (361)
T KOG1430|consen  311 LGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASESDS  351 (361)
T ss_pred             eccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhhhc
Confidence            224577899999 8999999 79999999999998776544

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=8e-36  Score=267.01  Aligned_cols=281  Identities=17%  Similarity=0.176  Sum_probs=205.4

Q ss_pred             CCCeEEEe----CcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC-----CCCCCCcEEEEEccCCCchHHHHHh
Q 020110            8 EEETVCVT----GANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-----PGAGDANLRVFEADVLDSGAVSRAV   78 (331)
Q Consensus         8 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~Dl~~~~~~~~~~   78 (331)
                      .+++||||    |||||||++|+++|+++|| +|++++|+......+...     ......+++++.+|+.|   +.+++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhh
Confidence            35789999    9999999999999999999 999999986542221100     00001158899999977   43444


Q ss_pred             --cCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhh
Q 020110           79 --EGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (331)
Q Consensus        79 --~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (331)
                        .++|+|||+++.                +..++.+++++|++.++++|||+||. .+|+....  .+..|+++..|. 
T Consensus       127 ~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~-~vyg~~~~--~p~~E~~~~~p~-  186 (378)
T PLN00016        127 AGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSA-GVYKKSDE--PPHVEGDAVKPK-  186 (378)
T ss_pred             ccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccH-hhcCCCCC--CCCCCCCcCCCc-
Confidence              468999998652                13467889999999999999999997 45554332  456676654432 


Q ss_pred             hhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeHHH
Q 020110          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKD  233 (331)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D  233 (331)
                              . +|..+|.+++    +.+++++++||+++|||....  .....++.++..+.++.   .+++.++|+|++|
T Consensus       187 --------~-sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~~--~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~D  251 (378)
T PLN00016        187 --------A-GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNNK--DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKD  251 (378)
T ss_pred             --------c-hHHHHHHHHH----HcCCCeEEEeceeEECCCCCC--chHHHHHHHHHcCCceeecCCCCeeeceecHHH
Confidence                    2 7999998775    568999999999999997543  23344566677777655   2457889999999


Q ss_pred             HHHHHHHhhcCCCCC-ceEEEe-ccccCHHHHHHHHHHhCCCCCCCCC--CCCC---------CCCccccccchHHH-Hh
Q 020110          234 VAKAQVLLFESPAAS-GRYLCT-NGIYQFGDFAERVSKLFPEFPVHRF--DGET---------QPGLIPCKDAAKRL-MD  299 (331)
Q Consensus       234 ~a~a~~~~l~~~~~~-g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~--~~~~---------~~~~~~~~~~~~k~-~~  299 (331)
                      +|+++..++.++... ++|+++ ++.+|+.|+++.+.+.+|. +....  ....         +........|++|+ ++
T Consensus       252 va~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~-~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~  330 (378)
T PLN00016        252 LASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGF-PEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEE  330 (378)
T ss_pred             HHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCC-CCceeecCccccCccccccccccccccccCHHHHHHh
Confidence            999999999886543 478765 4669999999999999843 22111  1000         01122334699999 78


Q ss_pred             hCCCc-cCHHHHHHHHHHHHHHcCCCCccC
Q 020110          300 LGLVF-TPVEDAVRETVESLKAKGFLGQHV  328 (331)
Q Consensus       300 lG~~~-~~~~~~l~~~~~~~~~~~~~~~~~  328 (331)
                      |||+| .+++++|+++++||+.++...+..
T Consensus       331 LGw~p~~~l~egl~~~~~~~~~~~~~~~~~  360 (378)
T PLN00016        331 LGWTPKFDLVEDLKDRYELYFGRGRDRKEA  360 (378)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHhcCCCcccc
Confidence            99999 599999999999999999887754

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=1.1e-35  Score=249.99  Aligned_cols=228  Identities=29%  Similarity=0.366  Sum_probs=189.6

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc--cEEEEccc
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC--KGVFHVAS   89 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~vih~a~   89 (331)
                      |||||||||||++++++|+++|+ .|+.+.|+...........     +++++.+|+.|.+.+.+++++.  |+|||+|+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~   74 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAA   74 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHHTESEEEEEBS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccc-----eEEEEEeeccccccccccccccCceEEEEeec
Confidence            79999999999999999999999 9999988776654433211     6899999999999999999765  99999999


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (331)
                      ..............++.|+.++.++++++++.+++++||+||+ .+|+...  ..+++|+++..|..      +|+.+|.
T Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~-~~y~~~~--~~~~~e~~~~~~~~------~Y~~~K~  145 (236)
T PF01370_consen   75 FSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSA-SVYGDPD--GEPIDEDSPINPLS------PYGASKR  145 (236)
T ss_dssp             SSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEG-GGGTSSS--SSSBETTSGCCHSS------HHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccc-ccccccc--cccccccccccccc------ccccccc
Confidence            7532111244678899999999999999999999999999996 6666553  36789988776664      7999999


Q ss_pred             HHHHHHHHHHHHcCCeEEEEcCCcccCCC--CCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHHHHHHHhhcC
Q 020110          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPL--MQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lR~~~v~G~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      .+|++++.+.++++++++++||+.+|||.  ..........++.++..|+++.   .+++.++++|++|+|++++.++++
T Consensus       146 ~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  225 (236)
T PF01370_consen  146 AAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALEN  225 (236)
T ss_dssp             HHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhC
Confidence            99999999998889999999999999999  1122356678889999998765   355889999999999999999999


Q ss_pred             CC-CCceEEEe
Q 020110          245 PA-ASGRYLCT  254 (331)
Q Consensus       245 ~~-~~g~~~~~  254 (331)
                      +. .+++||++
T Consensus       226 ~~~~~~~yNig  236 (236)
T PF01370_consen  226 PKAAGGIYNIG  236 (236)
T ss_dssp             SCTTTEEEEES
T ss_pred             CCCCCCEEEeC
Confidence            88 56688764

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=5.8e-34  Score=249.29  Aligned_cols=266  Identities=17%  Similarity=0.126  Sum_probs=194.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+|||||||||||++++++|+++|| +|++++|+......+...      +++++.+|+.|++++.++++++|+|||+++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~------~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~   73 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEW------GAELVYGDLSLPETLPPSFKGVTAIIDAST   73 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhc------CCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence            4899999999999999999999999 999999986543322221      789999999999999999999999999876


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (331)
                      ..     ..++...+++|+.++.+++++|++.++++|||+||.++ ....                     ..+|..+|.
T Consensus        74 ~~-----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~-~~~~---------------------~~~~~~~K~  126 (317)
T CHL00194         74 SR-----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNA-EQYP---------------------YIPLMKLKS  126 (317)
T ss_pred             CC-----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccc-cccC---------------------CChHHHHHH
Confidence            32     12345678899999999999999999999999998532 1000                     026889999


Q ss_pred             HHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc--cCcCCCCceeHHHHHHHHHHhhcCCCC
Q 020110          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDVAKAQVLLFESPAA  247 (331)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~v~D~a~a~~~~l~~~~~  247 (331)
                      .+|+.++    +.+++++++||+.+|+.....       .......+.+..  .+++.++|+|++|+|+++..++..+..
T Consensus       127 ~~e~~l~----~~~l~~tilRp~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~  195 (317)
T CHL00194        127 DIEQKLK----KSGIPYTIFRLAGFFQGLISQ-------YAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPET  195 (317)
T ss_pred             HHHHHHH----HcCCCeEEEeecHHhhhhhhh-------hhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccc
Confidence            9998875    678999999999888642211       111222333332  244778999999999999999987654


Q ss_pred             Cc-eEEEe-ccccCHHHHHHHHHHhCCCC----CCCCCCC-----------C-CC-----------CCccccccchHHH-
Q 020110          248 SG-RYLCT-NGIYQFGDFAERVSKLFPEF----PVHRFDG-----------E-TQ-----------PGLIPCKDAAKRL-  297 (331)
Q Consensus       248 ~g-~~~~~-~~~~s~~e~~~~i~~~~~~~----~~~~~~~-----------~-~~-----------~~~~~~~~~~~k~-  297 (331)
                      .| +|+++ ++.+|++|+++.+.+.++..    .+|.+..           . ..           ........+.+++ 
T Consensus       196 ~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  275 (317)
T CHL00194        196 KNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELY  275 (317)
T ss_pred             cCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHH
Confidence            44 78665 56799999999999988421    1111000           0 00           1112233456677 


Q ss_pred             HhhCCCc---cCHHHHHHHHHHHHHH
Q 020110          298 MDLGLVF---TPVEDAVRETVESLKA  320 (331)
Q Consensus       298 ~~lG~~~---~~~~~~l~~~~~~~~~  320 (331)
                      +.+|+.|   .++++++++++.-.++
T Consensus       276 ~~~g~~p~~~~~~~~~~~~~~~~~~~  301 (317)
T CHL00194        276 KIFKIDPNELISLEDYFQEYFERILK  301 (317)
T ss_pred             HHhCCChhhhhhHHHHHHHHHHHHHH
Confidence            7899997   4899999888876544

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=9.4e-34  Score=228.40  Aligned_cols=302  Identities=18%  Similarity=0.149  Sum_probs=239.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh----hcCCCCCCCcEEEEEccCCCchHHHHHhcC--cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVEG--CK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d   82 (331)
                      +|+.||||-||+-|+.|++.|+++|+ +|.++.|+.+..+..    ...+.....++..+.+|++|...+..+++.  +|
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY-~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGY-EVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCc-EEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            57899999999999999999999999 999999975443222    233333333688999999999999999875  79


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--CEEEEeCccceeccCCCCCCccccCCCCCChhhhhcc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (331)
                      -|+|+||..++..+.+.|....+++..|+.+|+++.+..+.  -||...||+ ..|+....  .|.+|++|..|..    
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS-E~fG~v~~--~pq~E~TPFyPrS----  153 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS-ELYGLVQE--IPQKETTPFYPRS----  153 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccH-HhhcCccc--CccccCCCCCCCC----
Confidence            99999999998888888999999999999999999999864  357776764 88877664  7899999999885    


Q ss_pred             CcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCCc--cCc--CCCCceeHHHH
Q 020110          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--QEY--HWLGAVPVKDV  234 (331)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~~--~~~~~v~v~D~  234 (331)
                        ||+.+|+.+......|.+.+|+..+.=++++-=+|......  ..+...+.++..|....  .|+  ..|||-|..|.
T Consensus       154 --PYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DY  231 (345)
T COG1089         154 --PYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDY  231 (345)
T ss_pred             --HHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHH
Confidence              99999999999999999999999998888888888764322  22344455667776554  565  89999999999


Q ss_pred             HHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCC------------CC------CC----CCCCcccccc
Q 020110          235 AKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHR------------FD------GE----TQPGLIPCKD  292 (331)
Q Consensus       235 a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~------------~~------~~----~~~~~~~~~~  292 (331)
                      +++++++++.+.+....+.+++..|++|+++...+..| ..+..            ..      .+    .+.....+..
T Consensus       232 Ve~mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~g-~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llg  310 (345)
T COG1089         232 VEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMVG-IDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLG  310 (345)
T ss_pred             HHHHHHHHccCCCCceEEecCceeeHHHHHHHHHHHcC-ceEEEeeccccccccccccCceeEEECccccCchhhhhhcC
Confidence            99999999988744433678999999999999999884 11110            00      01    1122334567


Q ss_pred             chHHH-HhhCCCc-cCHHHHHHHHHHHHHHc
Q 020110          293 AAKRL-MDLGLVF-TPVEDAVRETVESLKAK  321 (331)
Q Consensus       293 ~~~k~-~~lG~~~-~~~~~~l~~~~~~~~~~  321 (331)
                      |++|+ +.|||+| ++|+|.+++|+++..+.
T Consensus       311 dp~KA~~~LGW~~~~~~~elv~~Mv~~dl~~  341 (345)
T COG1089         311 DPTKAKEKLGWRPEVSLEELVREMVEADLEA  341 (345)
T ss_pred             CHHHHHHHcCCccccCHHHHHHHHHHHHHHH
Confidence            99999 7899999 69999999999987543

>PRK05865 hypothetical protein; Provisional

Probab=100.00  E-value=7.1e-33  Score=262.89  Aligned_cols=248  Identities=23%  Similarity=0.212  Sum_probs=188.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+|+|||||||||++++++|+++|+ +|++++|+....  .   .   . +++++.+|++|.+++.++++++|+|||+|+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~-~Vv~l~R~~~~~--~---~---~-~v~~v~gDL~D~~~l~~al~~vD~VVHlAa   70 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGH-EVVGIARHRPDS--W---P---S-SADFIAADIRDATAVESAMTGADVVAHCAW   70 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCchhh--c---c---c-CceEEEeeCCCHHHHHHHHhCCCEEEECCC
Confidence            4899999999999999999999999 999999864321  1   0   1 678899999999999999999999999997


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (331)
                      ....         .+++|+.++.++++++++.++++|||+||..                                  |.
T Consensus        71 ~~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~----------------------------------K~  107 (854)
T PRK05865         71 VRGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH----------------------------------QP  107 (854)
T ss_pred             cccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH----------------------------------HH
Confidence            5321         5689999999999999999999999999841                                  67


Q ss_pred             HHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc--CCCCceeHHHHHHHHHHhhcCCC-
Q 020110          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY--HWLGAVPVKDVAKAQVLLFESPA-  246 (331)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~D~a~a~~~~l~~~~-  246 (331)
                      .+|+++.    +++++++++||+++|||+..       .++.++........++  ..++|||++|+|+++..++.... 
T Consensus       108 aaE~ll~----~~gl~~vILRp~~VYGP~~~-------~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~  176 (854)
T PRK05865        108 RVEQMLA----DCGLEWVAVRCALIFGRNVD-------NWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVI  176 (854)
T ss_pred             HHHHHHH----HcCCCEEEEEeceEeCCChH-------HHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCc
Confidence            7787664    57899999999999999621       2233333222222333  46799999999999999986543 


Q ss_pred             CCceEEEe-ccccCHHHHHHHHHHhCCCC--CCCCCCCCC---CCCccccccchHHH-HhhCCCc-cCHHHHHHHHHHHH
Q 020110          247 ASGRYLCT-NGIYQFGDFAERVSKLFPEF--PVHRFDGET---QPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVESL  318 (331)
Q Consensus       247 ~~g~~~~~-~~~~s~~e~~~~i~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~  318 (331)
                      ..++||++ ++.+|++|+++.+.+.....  +........   ........+|++|+ +.|||+| .+++++|+++++|+
T Consensus       177 ~ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~  256 (854)
T PRK05865        177 DSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAV  256 (854)
T ss_pred             CCCeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            45688664 56799999999998753111  111111110   11122346899999 7899999 59999999999999


Q ss_pred             HHc
Q 020110          319 KAK  321 (331)
Q Consensus       319 ~~~  321 (331)
                      +.+
T Consensus       257 r~r  259 (854)
T PRK05865        257 RGR  259 (854)
T ss_pred             Hhh
Confidence            875

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=3.6e-33  Score=242.10  Aligned_cols=273  Identities=18%  Similarity=0.213  Sum_probs=187.4

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcccCC
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPC   91 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~~~   91 (331)
                      |||||||||||+++++.|+++|+ +|++++|+..........      .+    .|+.. ..+...+.++|+|||+|+..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------~~----~~~~~-~~~~~~~~~~D~Vvh~a~~~   68 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGH-EVTILTRSPPAGANTKWE------GY----KPWAP-LAESEALEGADAVINLAGEP   68 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCC-EEEEEeCCCCCCCcccce------ee----ecccc-cchhhhcCCCCEEEECCCCC
Confidence            69999999999999999999999 999999987654322110      11    12222 34456678899999999975


Q ss_pred             CCCC--CCCchhhhhHHHHHHHHHHHHHHHhCCCC--EEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           92 TLED--PVDPEKELILPAVQGTLNVLEAAKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        92 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      ....  ....+...++.|+.++.++++++++.+++  +||+.||. .+|+...  ..+++|+++..+.      +.|+..
T Consensus        69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~-~~yg~~~--~~~~~E~~~~~~~------~~~~~~  139 (292)
T TIGR01777        69 IADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAV-GYYGTSE--DRVFTEEDSPAGD------DFLAEL  139 (292)
T ss_pred             cccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeE-EEeCCCC--CCCcCcccCCCCC------ChHHHH
Confidence            4321  12234667889999999999999999874  45555544 4555433  2567888744332      245666


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHH--HHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQ--QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      +...|..+..+ ++.+++++++||+.+|||...    ....+..  +...+.....+++.++|+|++|+|+++..+++.+
T Consensus       140 ~~~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~  214 (292)
T TIGR01777       140 CRDWEEAAQAA-EDLGTRVVLLRTGIVLGPKGG----ALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENA  214 (292)
T ss_pred             HHHHHHHhhhc-hhcCCceEEEeeeeEECCCcc----hhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCc
Confidence            66666665543 356899999999999999642    1112221  1122223335668899999999999999999887


Q ss_pred             CCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCC----------CCCccccccchHHHHhhCCCc-c-CHHHHH
Q 020110          246 AASGRYLC-TNGIYQFGDFAERVSKLFPEFPVHRFDGET----------QPGLIPCKDAAKRLMDLGLVF-T-PVEDAV  311 (331)
Q Consensus       246 ~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~k~~~lG~~~-~-~~~~~l  311 (331)
                      ...|+|++ +++++|++|+++.+++.++ .+.+......          .....+..++++|++++||+| . +++|++
T Consensus       215 ~~~g~~~~~~~~~~s~~di~~~i~~~~g-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  292 (292)
T TIGR01777       215 SISGPVNATAPEPVRNKEFAKALARALH-RPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL  292 (292)
T ss_pred             ccCCceEecCCCccCHHHHHHHHHHHhC-CCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence            66778866 5577999999999999984 3322111110          011245678889998899999 4 788864

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=2.1e-32  Score=250.57  Aligned_cols=264  Identities=18%  Similarity=0.200  Sum_probs=185.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccchhhcC---------C--------CC----CCCcEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFAL---------P--------GA----GDANLRVF   64 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~---------~--------~~----~~~~~~~~   64 (331)
                      +.|+|||||||||||++|++.|++.+  ..+|+++.|.........++         .        ..    ...+++++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            45799999999999999999999864  23789999966432221111         0        00    00278999


Q ss_pred             EccCCC-------chHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceec
Q 020110           65 EADVLD-------SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIV  136 (331)
Q Consensus        65 ~~Dl~~-------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~  136 (331)
                      .+|+++       .+.+..+++++|+|||+|+....   ..++...+++|+.++.+++++|++. ++++|||+||+++++
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG  166 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCG  166 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEec
Confidence            999984       34467788899999999998764   3457888999999999999999986 788999999975443


Q ss_pred             cCCCC-CCccccCCC-C-----CCh-----------------------------------hhhhccCcchhHHHHHHHHH
Q 020110          137 PNPGW-KGKVFDETS-W-----TDL-----------------------------------EYCKSRKKWYPVSKTLAEKA  174 (331)
Q Consensus       137 ~~~~~-~~~~~~E~~-~-----~~~-----------------------------------~~~~~~~~~y~~sK~~~e~~  174 (331)
                      ...+. ...++.+.. +     .++                                   .......+.|+.||..+|.+
T Consensus       167 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~l  246 (491)
T PLN02996        167 EKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEML  246 (491)
T ss_pred             CCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHH
Confidence            32211 112222110 0     000                                   00111246799999999999


Q ss_pred             HHHHHHHcCCeEEEEcCCcccCCCCCCCCChh------HHHHHHHHcCCCCc---cCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          175 AWEFAEKHGVDVVAIHPATCLGPLMQPYLNAS------CAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       175 ~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      +..++  .+++++++||++|||+...+...++      ..++..+..|....   .|++.+|+|||+|++++++.++...
T Consensus       247 v~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~  324 (491)
T PLN02996        247 LGNFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAH  324 (491)
T ss_pred             HHHhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHh
Confidence            98774  4899999999999999875532222      23344445555533   3558999999999999999888753


Q ss_pred             --C-C-CceEEEe-c--cccCHHHHHHHHHHhCCCCCC
Q 020110          246 --A-A-SGRYLCT-N--GIYQFGDFAERVSKLFPEFPV  276 (331)
Q Consensus       246 --~-~-~g~~~~~-~--~~~s~~e~~~~i~~~~~~~~~  276 (331)
                        . . ..+||++ +  .++|+.|+++.+.+.++..|.
T Consensus       325 ~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~  362 (491)
T PLN02996        325 AGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW  362 (491)
T ss_pred             hccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence              1 2 2378775 4  468999999999998755553

>PLN02778 3,5-epimerase/4-reductase

Probab=100.00  E-value=1.5e-31  Score=231.30  Aligned_cols=268  Identities=12%  Similarity=0.130  Sum_probs=188.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      .|+||||||+||||++|+++|+++|+ +|+...                        .|+.+.+.+...++  ++|+|||
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-~V~~~~------------------------~~~~~~~~v~~~l~~~~~D~ViH   63 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGI-DFHYGS------------------------GRLENRASLEADIDAVKPTHVFN   63 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC-EEEEec------------------------CccCCHHHHHHHHHhcCCCEEEE
Confidence            46899999999999999999999999 887431                        23344455555555  5899999


Q ss_pred             cccCCCCC---CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCC-C---CCccccCCCCCChhhhhc
Q 020110           87 VASPCTLE---DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPG-W---KGKVFDETSWTDLEYCKS  159 (331)
Q Consensus        87 ~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~-~---~~~~~~E~~~~~~~~~~~  159 (331)
                      +||.....   .+..++...+++|+.++.+|+++|++.++++ +++||. .+|+... .   .+.+++|+++..+.    
T Consensus        64 ~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~-v~~sS~-~vy~~~~~~p~~~~~~~~Ee~~p~~~----  137 (298)
T PLN02778         64 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVL-TNYATG-CIFEYDDAHPLGSGIGFKEEDTPNFT----  137 (298)
T ss_pred             CCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCE-EEEecc-eEeCCCCCCCcccCCCCCcCCCCCCC----
Confidence            99986532   2445678899999999999999999999864 555765 4443321 1   12357776654322    


Q ss_pred             cCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHH
Q 020110          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQ  238 (331)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~  238 (331)
                       .+.|+.+|+++|.++..|+     +..++|+..++|++..    ....++.++..+..+. .+   .+|+|++|+++++
T Consensus       138 -~s~Yg~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~----~~~~fi~~~~~~~~~~~~~---~s~~yv~D~v~al  204 (298)
T PLN02778        138 -GSFYSKTKAMVEELLKNYE-----NVCTLRVRMPISSDLS----NPRNFITKITRYEKVVNIP---NSMTILDELLPIS  204 (298)
T ss_pred             -CCchHHHHHHHHHHHHHhh-----ccEEeeecccCCcccc----cHHHHHHHHHcCCCeeEcC---CCCEEHHHHHHHH
Confidence             2589999999999998764     4567888877876532    1224577777776543 33   4799999999999


Q ss_pred             HHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC----CCCCCCCCCC--CCCccccccchHHH-HhhCCCccCHHHH
Q 020110          239 VLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE----FPVHRFDGET--QPGLIPCKDAAKRL-MDLGLVFTPVEDA  310 (331)
Q Consensus       239 ~~~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~k~-~~lG~~~~~~~~~  310 (331)
                      +.++.... .|.||+ +++.+|+.|+++.+++.++.    ..+.......  ........+|++|+ +.++=.+...+++
T Consensus       205 ~~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~~~~~~  283 (298)
T PLN02778        205 IEMAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLPIKESL  283 (298)
T ss_pred             HHHHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHHHHHHhcccccchHHHH
Confidence            99987543 478876 55779999999999999942    1111111000  01122346999999 6666656788899


Q ss_pred             HHHHHHHHHHc
Q 020110          311 VRETVESLKAK  321 (331)
Q Consensus       311 l~~~~~~~~~~  321 (331)
                      ++..++-.+..
T Consensus       284 ~~~~~~~~~~~  294 (298)
T PLN02778        284 IKYVFEPNKKT  294 (298)
T ss_pred             HHHHHHHHHhh
Confidence            88888777543

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=5.6e-32  Score=210.86  Aligned_cols=286  Identities=21%  Similarity=0.227  Sum_probs=213.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC--CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   84 (331)
                      ||+|||||++|.+|++|.+.+.++|.  ++-+..                     ..-.+|+++..+.+++++  ++.+|
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~---------------------~skd~DLt~~a~t~~lF~~ekPthV   59 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI---------------------GSKDADLTNLADTRALFESEKPTHV   59 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe---------------------ccccccccchHHHHHHHhccCCcee
Confidence            57999999999999999999998876  122211                     112489999999999986  48999


Q ss_pred             EEcccCCCC-CCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccC-c
Q 020110           85 FHVASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK-K  162 (331)
Q Consensus        85 ih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~-~  162 (331)
                      ||+|++++. -.--..+.+.+..|+....|++..|-++|++++|++.|+ ++|++...  .|++|+..++...  .+. -
T Consensus        60 IhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclSt-CIfPdkt~--yPIdEtmvh~gpp--hpsN~  134 (315)
T KOG1431|consen   60 IHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLST-CIFPDKTS--YPIDETMVHNGPP--HPSNF  134 (315)
T ss_pred             eehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcce-eecCCCCC--CCCCHHHhccCCC--CCCch
Confidence            999998775 222333578899999999999999999999999988886 78876654  8899976543221  121 3


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHHHHH----cCC-CCc-cC--cCCCCceeH
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLL----QGS-KDT-QE--YHWLGAVPV  231 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~----~~~-~~~-~~--~~~~~~v~v  231 (331)
                      .|+.+|+++.-.-+.|..++|...+.+-|.++|||.+...   ...++.+++++.    +|. ++. +|  ...|+|+|+
T Consensus       135 gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys  214 (315)
T KOG1431|consen  135 GYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYS  214 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhH
Confidence            6999999999888999999999999999999999987532   234555565542    232 233 44  477999999


Q ss_pred             HHHHHHHHHhhcCCCC-CceEEEecc--ccCHHHHHHHHHHhCCCCCCCC-CCCCCCCCccccccchHHHHhhCCCc--c
Q 020110          232 KDVAKAQVLLFESPAA-SGRYLCTNG--IYQFGDFAERVSKLFPEFPVHR-FDGETQPGLIPCKDAAKRLMDLGLVF--T  305 (331)
Q Consensus       232 ~D~a~a~~~~l~~~~~-~g~~~~~~~--~~s~~e~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~lG~~~--~  305 (331)
                      +|+|+++++++.+-+. ..+.+.+++  .+|++|+++++.+.+ ++.-.. +......-...-..|++|++.|+|.|  +
T Consensus       215 ~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~-~F~G~l~~DttK~DGq~kKtasnsKL~sl~pd~~ft  293 (315)
T KOG1431|consen  215 DDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAV-DFTGKLVWDTTKSDGQFKKTASNSKLRSLLPDFKFT  293 (315)
T ss_pred             hHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHh-CCCceEEeeccCCCCCcccccchHHHHHhCCCcccC
Confidence            9999999999986432 335566666  699999999999998 332111 11111111223457899999999988  3


Q ss_pred             CHHHHHHHHHHHHHHc
Q 020110          306 PVEDAVRETVESLKAK  321 (331)
Q Consensus       306 ~~~~~l~~~~~~~~~~  321 (331)
                      +|+++|.++++||.++
T Consensus       294 ~l~~ai~~t~~Wy~~N  309 (315)
T KOG1431|consen  294 PLEQAISETVQWYLDN  309 (315)
T ss_pred             hHHHHHHHHHHHHHHh
Confidence            7999999999999765

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-31  Score=254.01  Aligned_cols=296  Identities=23%  Similarity=0.217  Sum_probs=205.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHH--HCCCCEEEEEecCCCccchhhcCCC-CCCCcEEEEEccCCCc------hHHHHHhcC
Q 020110           10 ETVCVTGANGFIGTWLVKTLL--DNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLDS------GAVSRAVEG   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~--~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~------~~~~~~~~~   80 (331)
                      |+|||||||||||++|+++|+  +.|+ +|++++|+.... .+..+.. ....+++++.+|++|+      +.+.++ ++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~-~V~~l~R~~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~   77 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREA-TVHVLVRRQSLS-RLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GD   77 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCC-EEEEEECcchHH-HHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cC
Confidence            489999999999999999999  4789 999999964322 1111100 0001789999999984      345554 88


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhcc
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (331)
                      +|+|||||+....   ........++|+.++.+++++|++.++++|||+||.. +|+...   .+++|++...+.   .+
T Consensus        78 ~D~Vih~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~-v~g~~~---~~~~e~~~~~~~---~~  147 (657)
T PRK07201         78 IDHVVHLAAIYDL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIA-VAGDYE---GVFREDDFDEGQ---GL  147 (657)
T ss_pred             CCEEEECceeecC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccc-cccCcc---Cccccccchhhc---CC
Confidence            9999999997553   2235667899999999999999999999999999974 444322   335555432211   22


Q ss_pred             CcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCC------hhHHHHHHHHcCCC-Cc---cCcCCCCcee
Q 020110          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLN------ASCAVLQQLLQGSK-DT---QEYHWLGAVP  230 (331)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~------~~~~~~~~~~~~~~-~~---~~~~~~~~v~  230 (331)
                      .++|+.+|..+|+++..   ..+++++++||+++||+.......      .+...+.+...... ..   .+...++++|
T Consensus       148 ~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  224 (657)
T PRK07201        148 PTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVP  224 (657)
T ss_pred             CCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeee
Confidence            35799999999999864   468999999999999986532111      11122333311111 11   2335689999


Q ss_pred             HHHHHHHHHHhhcCCCCCc-eEEEe-ccccCHHHHHHHHHHhCCCCC-------CCCCC----CC--------------C
Q 020110          231 VKDVAKAQVLLFESPAASG-RYLCT-NGIYQFGDFAERVSKLFPEFP-------VHRFD----GE--------------T  283 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~~~g-~~~~~-~~~~s~~e~~~~i~~~~~~~~-------~~~~~----~~--------------~  283 (331)
                      ++|+++++..++..+...| +|+++ ++++|+.|+++.+.+.++...       +|.+.    ..              .
T Consensus       225 vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  304 (657)
T PRK07201        225 VDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQ  304 (657)
T ss_pred             HHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHh
Confidence            9999999999887655545 78765 577999999999999984322       11110    00              0


Q ss_pred             C--------CCccccccchHHH-Hhh---CCCccCHHHHHHHHHHHHHHc
Q 020110          284 Q--------PGLIPCKDAAKRL-MDL---GLVFTPVEDAVRETVESLKAK  321 (331)
Q Consensus       284 ~--------~~~~~~~~~~~k~-~~l---G~~~~~~~~~l~~~~~~~~~~  321 (331)
                      .        .......+|++++ +.|   |+.+..+.+.+...++|+.++
T Consensus       305 ~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p~~~~~~~~~~~~~~~~  354 (657)
T PRK07201        305 LGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVPRLASYAPRLWDYWERH  354 (657)
T ss_pred             cCCCHHHHHhccCCCeeccHHHHHHhccCCcCCCChHHHHHHHHHHHHhc
Confidence            0        1223456788888 666   677778999999999988776

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=100.00  E-value=4.4e-31  Score=213.33  Aligned_cols=277  Identities=18%  Similarity=0.187  Sum_probs=194.7

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-CccEEEEcccC
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGVFHVASP   90 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~vih~a~~   90 (331)
                      |+|||||||||++|+..|.+.|| +|++++|++.........      ++.       ..+.+.+..+ ++|+|||+||.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh-~v~iltR~~~~~~~~~~~------~v~-------~~~~~~~~~~~~~DavINLAG~   66 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGH-QVTILTRRPPKASQNLHP------NVT-------LWEGLADALTLGIDAVINLAGE   66 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCC-eEEEEEcCCcchhhhcCc------ccc-------ccchhhhcccCCCCEEEECCCC
Confidence            68999999999999999999999 999999988765443221      111       1233444455 69999999997


Q ss_pred             CCCCC-C-CCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           91 CTLED-P-VDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        91 ~~~~~-~-~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      ...+. + .+..+..++-.+..|..|+++..+.  +.+.+|. +|+-.+|++.+.  ..++|+++.....       -+.
T Consensus        67 ~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~is-aSAvGyYG~~~~--~~~tE~~~~g~~F-------la~  136 (297)
T COG1090          67 PIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLIS-ASAVGYYGHSGD--RVVTEESPPGDDF-------LAQ  136 (297)
T ss_pred             ccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEe-cceEEEecCCCc--eeeecCCCCCCCh-------HHH
Confidence            76533 3 2334777888899999999988755  5556666 444588887764  8899986554332       111


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      ....=|+... .++..|.+++.+|.|.|.|+.-..  ........+...|.++..|.++++|||++|++++|.+++++..
T Consensus       137 lc~~WE~~a~-~a~~~gtRvvllRtGvVLs~~GGa--L~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~  213 (297)
T COG1090         137 LCQDWEEEAL-QAQQLGTRVVLLRTGVVLSPDGGA--LGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ  213 (297)
T ss_pred             HHHHHHHHHh-hhhhcCceEEEEEEEEEecCCCcc--hhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC
Confidence            1111122221 133558999999999999986321  1112234466777888888899999999999999999999999


Q ss_pred             CCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCCC----------CCccccccchHHHHhhCCCc--cCHHHHHHH
Q 020110          247 ASGRYLC-TNGIYQFGDFAERVSKLFPEFPVHRFDGETQ----------PGLIPCKDAAKRLMDLGLVF--TPVEDAVRE  313 (331)
Q Consensus       247 ~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~k~~~lG~~~--~~~~~~l~~  313 (331)
                      ..|.||+ ++.+++..+|.+++++.+ +.|.....++..          ........-+.|+...||++  .+++++|.+
T Consensus       214 lsGp~N~taP~PV~~~~F~~al~r~l-~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~  292 (297)
T COG1090         214 LSGPFNLTAPNPVRNKEFAHALGRAL-HRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALAD  292 (297)
T ss_pred             CCCcccccCCCcCcHHHHHHHHHHHh-CCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHH
Confidence            9998865 678999999999999998 443222221100          12333445556676789988  399999998


Q ss_pred             HHH
Q 020110          314 TVE  316 (331)
Q Consensus       314 ~~~  316 (331)
                      .+.
T Consensus       293 il~  295 (297)
T COG1090         293 ILK  295 (297)
T ss_pred             HHh
Confidence            864

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.98  E-value=1.7e-30  Score=229.65  Aligned_cols=239  Identities=23%  Similarity=0.181  Sum_probs=204.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCC--CCCcEEEEEccCCCchHHHHHhcC--cc
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA--GDANLRVFEADVLDSGAVSRAVEG--CK   82 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~--~d   82 (331)
                      .+.|+||||||+|-||+.+|+++++.+..+++.++|+..+..........  ...++.++.||++|.+.+..++++  +|
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd  327 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD  327 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence            35789999999999999999999999866999999987654333321111  012788999999999999999998  99


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      +|+|.||..++..++.+|.+.+++|+.||.|++++|.++++++||.+||.-++++                 .      |
T Consensus       328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~P-----------------t------N  384 (588)
T COG1086         328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNP-----------------T------N  384 (588)
T ss_pred             eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCC-----------------c------h
Confidence            9999999999999999999999999999999999999999999999999866542                 1      4


Q ss_pred             chhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc--cCcCCCCceeHHHHHHH
Q 020110          163 WYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDVAKA  237 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~v~D~a~a  237 (331)
                      .||.||+.+|..+..+++..   +.+++++|+|||.|..-    +.++.+..++.+|++++  .++-.|-|+.+.|.++.
T Consensus       385 vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG----SViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~L  460 (588)
T COG1086         385 VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG----SVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQL  460 (588)
T ss_pred             HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC----CCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHH
Confidence            89999999999999987633   38999999999999752    46778899999999988  56677889999999999


Q ss_pred             HHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCC
Q 020110          238 QVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (331)
Q Consensus       238 ~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~  272 (331)
                      ++.+......+.+|+.. |+++++.|+++.+-+..|
T Consensus       461 VlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         461 VLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             HHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence            99999876555588775 688999999999999884

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.97  E-value=1e-31  Score=223.78  Aligned_cols=234  Identities=23%  Similarity=0.150  Sum_probs=179.0

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--CCCCcEE----EEEccCCCchHHHHHhc--CccE
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANLR----VFEADVLDSGAVSRAVE--GCKG   83 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~----~~~~Dl~~~~~~~~~~~--~~d~   83 (331)
                      ||||||+|.||+.|+++|++.+-..+++++|+....-.+.....  ....+++    .+.+|++|.+.+..+++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            79999999999999999999985489999998765444443220  0000333    45799999999999998  7999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (331)
                      |||.||..++..++..|.+++++|+.|+.|++++|.++++++||++||.-++.                       |.+.
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~-----------------------Ptnv  137 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVN-----------------------PTNV  137 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS-------------------------SH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCC-----------------------CCcH
Confidence            99999999988888899999999999999999999999999999999975532                       1248


Q ss_pred             hhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc--cCcCCCCceeHHHHHHHH
Q 020110          164 YPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDVAKAQ  238 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~v~D~a~a~  238 (331)
                      ||.||+.+|+++..++...   +.+++++|+|+|.|..    .+.++.+..++..|++++  .++..|-|+.++++++.+
T Consensus       138 mGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~----GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lv  213 (293)
T PF02719_consen  138 MGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR----GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLV  213 (293)
T ss_dssp             HHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT----TSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC----CcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHH
Confidence            9999999999999887555   6899999999999975    256788999999999987  466778999999999999


Q ss_pred             HHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCC
Q 020110          239 VLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (331)
Q Consensus       239 ~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~  272 (331)
                      +.+......+.+|+.. |+++++.|+++.+.+..|
T Consensus       214 l~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g  248 (293)
T PF02719_consen  214 LQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSG  248 (293)
T ss_dssp             HHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT
T ss_pred             HHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcc
Confidence            9998776555578764 688999999999999985

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.97  E-value=1.1e-28  Score=220.72  Aligned_cols=250  Identities=23%  Similarity=0.234  Sum_probs=176.7

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccchhhcC---------CCC--CCCcEEEEEccCCCc------
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFAL---------PGA--GDANLRVFEADVLDS------   71 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~---------~~~--~~~~~~~~~~Dl~~~------   71 (331)
                      +|||||||||||++|+++|+++|  . +|+++.|+........++         ...  ...+++++.+|++++      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~-~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~   79 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQA-KVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSD   79 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCC-EEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCH
Confidence            58999999999999999999998  5 799999976532111110         000  002789999999764      


Q ss_pred             hHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           72 GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        72 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +.+..+.+++|+|||+|+....   ..+.....+.|+.++.+++++|.+.++++|||+||.+++.....   .+..|+++
T Consensus        80 ~~~~~~~~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~---~~~~~~~~  153 (367)
T TIGR01746        80 AEWERLAENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDL---STVTEDDA  153 (367)
T ss_pred             HHHHHHHhhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCC---CCcccccc
Confidence            4566777889999999997653   23356678899999999999999999889999999855433221   22344433


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC---ChhHHHHHHHHcCCCCccCc-CCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQEY-HWLG  227 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~  227 (331)
                      ..+.. ....+.|+.+|..+|.+++.+.+ .|++++++||+.++|+......   ..+..++.........+..+ ...+
T Consensus       154 ~~~~~-~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  231 (367)
T TIGR01746       154 IVTPP-PGLAGGYAQSKWVAELLVREASD-RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTED  231 (367)
T ss_pred             ccccc-cccCCChHHHHHHHHHHHHHHHh-cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccC
Confidence            22111 11235799999999999987764 4999999999999998433211   12223333333323333233 3678


Q ss_pred             ceeHHHHHHHHHHhhcCCCC---CceEEEe-ccccCHHHHHHHHHH
Q 020110          228 AVPVKDVAKAQVLLFESPAA---SGRYLCT-NGIYQFGDFAERVSK  269 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~~---~g~~~~~-~~~~s~~e~~~~i~~  269 (331)
                      |+|++|+++++..++.....   +++|+++ +++.++.|+++.+.+
T Consensus       232 ~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~  277 (367)
T TIGR01746       232 LTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER  277 (367)
T ss_pred             cccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH
Confidence            99999999999998876654   4478665 577999999999998

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=1.1e-28  Score=220.81  Aligned_cols=225  Identities=16%  Similarity=0.110  Sum_probs=171.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch---hhcCCCCCCCcEEEEEccCCCchHHHHHhc----C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH---LFALPGAGDANLRVFEADVLDSGAVSRAVE----G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~   80 (331)
                      ++++|||||||||||++++++|+++|+ +|++++|+......   ......... +++++.+|++|++++.++++    +
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~-~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELP-GAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcC-CceEEEeeCCCHHHHHHHHHHhCCC
Confidence            467999999999999999999999999 99999997643211   010100111 78899999999999999887    5


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhcc
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (331)
                      +|+||||++....     .....+++|+.++.++++++++.++++||++||.+. +.                |.     
T Consensus       137 ~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v-~~----------------p~-----  189 (390)
T PLN02657        137 VDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICV-QK----------------PL-----  189 (390)
T ss_pred             CcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccc-cC----------------cc-----
Confidence            8999999874321     123467889999999999999999999999998733 21                11     


Q ss_pred             CcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCc--CCC-CceeHHHHHH
Q 020110          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEY--HWL-GAVPVKDVAK  236 (331)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~-~~v~v~D~a~  236 (331)
                       ..|..+|...|+.+..  ...+++++++||+.+||+..        ..+..+..|.+.. +|+  ..+ ++||++|+|+
T Consensus       190 -~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~--------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~  258 (390)
T PLN02657        190 -LEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG--------GQVEIVKDGGPYVMFGDGKLCACKPISEADLAS  258 (390)
T ss_pred             -hHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH--------HHHHhhccCCceEEecCCcccccCceeHHHHHH
Confidence             2688999999988864  25789999999999997531        2234455666654 444  333 5799999999


Q ss_pred             HHHHhhcCCCCCc-eEEEec--cccCHHHHHHHHHHhCC
Q 020110          237 AQVLLFESPAASG-RYLCTN--GIYQFGDFAERVSKLFP  272 (331)
Q Consensus       237 a~~~~l~~~~~~g-~~~~~~--~~~s~~e~~~~i~~~~~  272 (331)
                      ++..++..+...+ +|++++  +.+|++|+++.+.+.++
T Consensus       259 ~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG  297 (390)
T PLN02657        259 FIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILG  297 (390)
T ss_pred             HHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhC
Confidence            9999987654444 787754  47999999999999984

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.96  E-value=5.7e-27  Score=224.50  Aligned_cols=261  Identities=14%  Similarity=0.170  Sum_probs=184.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      +|+||||||+||||++|++.|.++|+ +|...                        .+|++|.+.+.+.+.  ++|+|||
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~-~v~~~------------------------~~~l~d~~~v~~~i~~~~pd~Vih  434 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGI-AYEYG------------------------KGRLEDRSSLLADIRNVKPTHVFN  434 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCC-eEEee------------------------ccccccHHHHHHHHHhhCCCEEEE
Confidence            46899999999999999999999999 77311                        145777778877776  6899999


Q ss_pred             cccCCC---CCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCC----CCCccccCCCCCChhhhhc
Q 020110           87 VASPCT---LEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPG----WKGKVFDETSWTDLEYCKS  159 (331)
Q Consensus        87 ~a~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~----~~~~~~~E~~~~~~~~~~~  159 (331)
                      ||+...   .+.+..++...+++|+.++.+|+++|++.+++ +|++||. .+|+...    ....|++|++...|.    
T Consensus       435 ~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~-~v~~~~~~~~~~~~~p~~E~~~~~~~----  508 (668)
T PLN02260        435 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATG-CIFEYDAKHPEGSGIGFKEEDKPNFT----  508 (668)
T ss_pred             CCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEccc-ceecCCcccccccCCCCCcCCCCCCC----
Confidence            999874   23345567889999999999999999999985 6677876 4443211    112478887654432    


Q ss_pred             cCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCC-CccCcCCCCceeHHHHHHHH
Q 020110          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-DTQEYHWLGAVPVKDVAKAQ  238 (331)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D~a~a~  238 (331)
                       .+.|+.+|+.+|+++..+.     +..++|+.++||.......    +++..+..... +..+   .+..+++|++.++
T Consensus       509 -~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~~~----nfv~~~~~~~~~~~vp---~~~~~~~~~~~~~  575 (668)
T PLN02260        509 -GSFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSNPR----NFITKISRYNKVVNIP---NSMTVLDELLPIS  575 (668)
T ss_pred             -CChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCCcc----HHHHHHhccceeeccC---CCceehhhHHHHH
Confidence             2589999999999998663     4567777778865432211    34444444433 2233   3567888999998


Q ss_pred             HHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCC-CC---CCCCCCCC--C-CCCccccccchHHH-HhhCCCccCHHH
Q 020110          239 VLLFESPAASGRYLCTN-GIYQFGDFAERVSKLFP-EF---PVHRFDGE--T-QPGLIPCKDAAKRL-MDLGLVFTPVED  309 (331)
Q Consensus       239 ~~~l~~~~~~g~~~~~~-~~~s~~e~~~~i~~~~~-~~---~~~~~~~~--~-~~~~~~~~~~~~k~-~~lG~~~~~~~~  309 (331)
                      +.++.. ...|+||+++ +.+|+.|+++.|.+.++ +.   ++......  . ...... .+|++|+ +.+|+ +.++++
T Consensus       576 ~~l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~-~l~~~k~~~~~~~-~~~~~~  652 (668)
T PLN02260        576 IEMAKR-NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNN-EMDASKLKKEFPE-LLSIKE  652 (668)
T ss_pred             HHHHHh-CCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccc-cccHHHHHHhCcc-ccchHH
Confidence            888764 3458997755 55999999999999773 32   11111111  1 112333 7999999 66888 889999


Q ss_pred             HHHHHHH
Q 020110          310 AVRETVE  316 (331)
Q Consensus       310 ~l~~~~~  316 (331)
                      +|.+++.
T Consensus       653 ~l~~~~~  659 (668)
T PLN02260        653 SLIKYVF  659 (668)
T ss_pred             HHHHHHh
Confidence            9998875

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.96  E-value=2.8e-28  Score=205.83  Aligned_cols=218  Identities=26%  Similarity=0.271  Sum_probs=128.5

Q ss_pred             EeCcchHHHHHHHHHHHHCCCC-EEEEEecCCCccchhhcC----CCC---------CCCcEEEEEccCCCc------hH
Q 020110           14 VTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFAL----PGA---------GDANLRVFEADVLDS------GA   73 (331)
Q Consensus        14 VtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~----~~~---------~~~~~~~~~~Dl~~~------~~   73 (331)
                      |||||||+|++|+++|++++.. +|+++.|........+++    ...         ...+++++.||++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            7999999999999999998642 899999976442222211    000         022899999999875      45


Q ss_pred             HHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC--CCcc--ccCC
Q 020110           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW--KGKV--FDET  149 (331)
Q Consensus        74 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~--~~~~--~~E~  149 (331)
                      +..+.+++|+||||||.+..   ..+..+..+.|+.|+.++++.|.+.+.++|+|+||+ .+.+....  ....  ..|.
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~---~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa-~v~~~~~~~~~~~~~~~~~~  156 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNF---NAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTA-YVAGSRPGTIEEKVYPEEED  156 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SB---S-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEG-GGTTS-TTT--SSS-HHH--
T ss_pred             hhccccccceeeecchhhhh---cccchhhhhhHHHHHHHHHHHHHhccCcceEEeccc-cccCCCCCcccccccccccc
Confidence            66777889999999998875   234566899999999999999997777799999993 44333221  0111  1111


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHHH-HHcCCCCc---cC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQ-LLQGSKDT---QE  222 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~-~~~~~~~~---~~  222 (331)
                      .. .  ......+.|..||..+|++++.++++.|++++|+||+.|+|......   ......++.. +..|....   .+
T Consensus       157 ~~-~--~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~  233 (249)
T PF07993_consen  157 DL-D--PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDP  233 (249)
T ss_dssp             EE-E----TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB--
T ss_pred             cc-h--hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCC
Confidence            11 1  11122358999999999999999877799999999999999543221   1223333333 33333222   22


Q ss_pred             cCCCCceeHHHHHHHH
Q 020110          223 YHWLGAVPVKDVAKAQ  238 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~  238 (331)
                      +...|+++||.+|++|
T Consensus       234 ~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  234 DARLDLVPVDYVARAI  249 (249)
T ss_dssp             -TT--EEEHHHHHHHH
T ss_pred             CceEeEECHHHHHhhC
Confidence            3569999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK12320 hypothetical protein; Provisional

Probab=99.95  E-value=1.7e-26  Score=215.44  Aligned_cols=239  Identities=15%  Similarity=0.139  Sum_probs=167.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+||||||+||||++|+++|+++|+ +|++++|.+....        .. +++++.+|++++. +.+++.++|+|||+|+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~-~Vi~ldr~~~~~~--------~~-~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa   69 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGH-TVSGIAQHPHDAL--------DP-RVDYVCASLRNPV-LQELAGEADAVIHLAP   69 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEeCChhhcc--------cC-CceEEEccCCCHH-HHHHhcCCCEEEEcCc
Confidence            3899999999999999999999999 9999998643211        01 6889999999984 7788889999999998


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (331)
                      ....        ...++|+.++.|++++|++.++ ++||+||..   +.+.                      .|.    
T Consensus        70 ~~~~--------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~---G~~~----------------------~~~----  111 (699)
T PRK12320         70 VDTS--------APGGVGITGLAHVANAAARAGA-RLLFVSQAA---GRPE----------------------LYR----  111 (699)
T ss_pred             cCcc--------chhhHHHHHHHHHHHHHHHcCC-eEEEEECCC---CCCc----------------------ccc----
Confidence            6321        1235899999999999999997 799999752   2111                      222    


Q ss_pred             HHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC-ChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCCC
Q 020110          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (331)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~  248 (331)
                      .+|.++.    .++++++++|++++|||...... ..+..++.....++       ...+||++|++++++.++... ..
T Consensus       112 ~aE~ll~----~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~-------pI~vIyVdDvv~alv~al~~~-~~  179 (699)
T PRK12320        112 QAETLVS----TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSAR-------PIRVLHLDDLVRFLVLALNTD-RN  179 (699)
T ss_pred             HHHHHHH----hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCC-------ceEEEEHHHHHHHHHHHHhCC-CC
Confidence            3566554    45689999999999999654321 23334444433443       344699999999999998764 35


Q ss_pred             ceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHH-HhhCCCcc-CH--HHHHHHH
Q 020110          249 GRYLC-TNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRL-MDLGLVFT-PV--EDAVRET  314 (331)
Q Consensus       249 g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~~~~-~~--~~~l~~~  314 (331)
                      |+||+ +++.+|+.|+++.+....|...+.     .........-|.... ..++|.|+ .+  .+.+.++
T Consensus       180 GiyNIG~~~~~Si~el~~~i~~~~p~~~~~-----~~~~~~~~~pdi~~a~~~~~w~~~~~~~~~~~~~~~  245 (699)
T PRK12320        180 GVVDLATPDTTNVVTAWRLLRSVDPHLRTR-----RVRSWEQLIPEVDIAAVQEDWNFEFGWQATEAIVDT  245 (699)
T ss_pred             CEEEEeCCCeeEHHHHHHHHHHhCCCcccc-----ccccHHHhCCCCchhhhhcCCCCcchHHHHHHHHhh
Confidence            68865 567799999999998775322211     111122344556666 56799995 44  3444444

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.95  E-value=1.6e-26  Score=199.52  Aligned_cols=245  Identities=16%  Similarity=0.135  Sum_probs=167.9

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh------cC-ccE
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV------EG-CKG   83 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------~~-~d~   83 (331)
                      +||||||||++|++++++|++.|+ +|++++|++.....        . +++.+.+|+.|++++.+++      ++ +|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~-~V~~~~R~~~~~~~--------~-~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASV-PFLVASRSSSSSAG--------P-NEKHVKFDWLDEDTWDNPFSSDDGMEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCC-cEEEEeCCCccccC--------C-CCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence            489999999999999999999999 99999998764321        1 6677889999999999988      56 999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (331)
                      |+|+++....      .       .....+++++|++.|+++||++||.....+   .                      
T Consensus        71 v~~~~~~~~~------~-------~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~---~----------------------  112 (285)
T TIGR03649        71 VYLVAPPIPD------L-------APPMIKFIDFARSKGVRRFVLLSASIIEKG---G----------------------  112 (285)
T ss_pred             EEEeCCCCCC------h-------hHHHHHHHHHHHHcCCCEEEEeeccccCCC---C----------------------
Confidence            9999764221      0       124568999999999999999998533111   0                      


Q ss_pred             hhHHHHHHHHHHHHHHHH-cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc--cCcCCCCceeHHHHHHHHHH
Q 020110          164 YPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDVAKAQVL  240 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~v~D~a~a~~~  240 (331)
                        ..+...|+.++    + .|++++++||+.++++.....   .   ...+.....+.  .++..++||+++|+|+++..
T Consensus       113 --~~~~~~~~~l~----~~~gi~~tilRp~~f~~~~~~~~---~---~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~  180 (285)
T TIGR03649       113 --PAMGQVHAHLD----SLGGVEYTVLRPTWFMENFSEEF---H---VEAIRKENKIYSATGDGKIPFVSADDIARVAYR  180 (285)
T ss_pred             --chHHHHHHHHH----hccCCCEEEEeccHHhhhhcccc---c---ccccccCCeEEecCCCCccCcccHHHHHHHHHH
Confidence              01112344333    4 489999999999986542111   0   11111222222  46688999999999999999


Q ss_pred             hhcCCCCC-ceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCC------------C-------------CCccccccc
Q 020110          241 LFESPAAS-GRYLC-TNGIYQFGDFAERVSKLFPEFPVHRFDGET------------Q-------------PGLIPCKDA  293 (331)
Q Consensus       241 ~l~~~~~~-g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~------------~-------------~~~~~~~~~  293 (331)
                      ++..+... +.|++ +++.+|+.|+++.+.+.+ +.+++......            .             .........
T Consensus       181 ~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~-g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~  259 (285)
T TIGR03649       181 ALTDKVAPNTDYVVLGPELLTYDDVAEILSRVL-GRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRL  259 (285)
T ss_pred             HhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHh-CCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccc
Confidence            99876544 46755 557899999999999999 44433221110            0             000001112


Q ss_pred             hHHH-HhhCCCccCHHHHHHHHHH
Q 020110          294 AKRL-MDLGLVFTPVEDAVRETVE  316 (331)
Q Consensus       294 ~~k~-~~lG~~~~~~~~~l~~~~~  316 (331)
                      ++.+ +.+|.+|++|++.+++...
T Consensus       260 ~~~~~~~~G~~p~~~~~~~~~~~~  283 (285)
T TIGR03649       260 NDVVKAVTGSKPRGFRDFAESNKA  283 (285)
T ss_pred             cchHHHHhCcCCccHHHHHHHhhh
Confidence            3444 6689999999998887643

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.95  E-value=3.9e-26  Score=210.76  Aligned_cols=256  Identities=16%  Similarity=0.185  Sum_probs=173.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC--CEEEEEecCCCccchhhcC----------------CCC-----CCCcEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFAL----------------PGA-----GDANLRVF   64 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~----------------~~~-----~~~~~~~~   64 (331)
                      +.|+|||||||||||++|+++|++.+.  .+|+++.|........+++                .+.     ...++..+
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            468999999999999999999998753  3789999965432211111                000     01278999


Q ss_pred             EccCCCc------hHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceecc
Q 020110           65 EADVLDS------GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVP  137 (331)
Q Consensus        65 ~~Dl~~~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~  137 (331)
                      .+|++++      +..+.+.+++|+|||+|+....   ..++...+++|+.++.+++++|++. ++++|||+||+++ |+
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayV-yG  273 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYV-NG  273 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCcee-ec
Confidence            9999987      3556666789999999998764   3457888999999999999999886 5789999999744 44


Q ss_pred             CCCCCCccccCCCCC----------------------Chh-------------------------------hhhccCcch
Q 020110          138 NPGWKGKVFDETSWT----------------------DLE-------------------------------YCKSRKKWY  164 (331)
Q Consensus       138 ~~~~~~~~~~E~~~~----------------------~~~-------------------------------~~~~~~~~y  164 (331)
                      ...   ..+.|....                      ++.                               ....-.+.|
T Consensus       274 ~~~---G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtY  350 (605)
T PLN02503        274 QRQ---GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTY  350 (605)
T ss_pred             CCC---CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChH
Confidence            432   112222111                      000                               001113689


Q ss_pred             hHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCCh------hHHHHHHHHcCCCCc---cCcCCCCceeHHHHH
Q 020110          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNA------SCAVLQQLLQGSKDT---QEYHWLGAVPVKDVA  235 (331)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a  235 (331)
                      ..||.++|.++..+.  .+++++|+||+.|.+....|...+      ....+.....|....   .++...|+|+||.++
T Consensus       351 t~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vv  428 (605)
T PLN02503        351 VFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVV  428 (605)
T ss_pred             HHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHH
Confidence            999999999998653  589999999999944332221111      001111112332211   345789999999999


Q ss_pred             HHHHHhhcC----CC-CCceEEEe-c--cccCHHHHHHHHHHhCC
Q 020110          236 KAQVLLFES----PA-ASGRYLCT-N--GIYQFGDFAERVSKLFP  272 (331)
Q Consensus       236 ~a~~~~l~~----~~-~~g~~~~~-~--~~~s~~e~~~~i~~~~~  272 (331)
                      .+++.+...    .. ...+|+++ +  .++++.|+.+.+.+.+.
T Consensus       429 na~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~  473 (605)
T PLN02503        429 NATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYK  473 (605)
T ss_pred             HHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHh
Confidence            999988432    11 22378775 4  56999999999998763

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.94  E-value=2.7e-26  Score=185.29  Aligned_cols=279  Identities=19%  Similarity=0.161  Sum_probs=200.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      +--+-|+|||||+|+.++.+|.+.|- +|++.-|.......-.+.-+..+ ++-+...|+.|+++++++++...+|||+.
T Consensus        61 GiVaTVFGAtGFlGryvvnklak~GS-QviiPyR~d~~~~r~lkvmGdLG-Qvl~~~fd~~DedSIr~vvk~sNVVINLI  138 (391)
T KOG2865|consen   61 GIVATVFGATGFLGRYVVNKLAKMGS-QVIIPYRGDEYDPRHLKVMGDLG-QVLFMKFDLRDEDSIRAVVKHSNVVINLI  138 (391)
T ss_pred             ceEEEEecccccccHHHHHHHhhcCC-eEEEeccCCccchhheeeccccc-ceeeeccCCCCHHHHHHHHHhCcEEEEee
Confidence            33567899999999999999999999 99999885544333333333344 89999999999999999999999999998


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      |.-    ++.......++|+.+...|.+.|++.|+.|||++|+..+-   -..                   .+-|-.+|
T Consensus       139 Grd----~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan---v~s-------------------~Sr~LrsK  192 (391)
T KOG2865|consen  139 GRD----YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN---VKS-------------------PSRMLRSK  192 (391)
T ss_pred             ccc----cccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc---ccC-------------------hHHHHHhh
Confidence            753    2333567889999999999999999999999999986421   110                   02689999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCc-CCCCceeHHHHHHHHHHhhcC
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEY-HWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      ..+|+.+++    .-...+|+||+.+||..+.. .+....++++   -..++   .|. .....|||-|+|.+|..+++.
T Consensus       193 ~~gE~aVrd----afPeAtIirPa~iyG~eDrf-ln~ya~~~rk---~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkD  264 (391)
T KOG2865|consen  193 AAGEEAVRD----AFPEATIIRPADIYGTEDRF-LNYYASFWRK---FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKD  264 (391)
T ss_pred             hhhHHHHHh----hCCcceeechhhhcccchhH-HHHHHHHHHh---cCceeeecCCcceeeccEEEehHHHHHHHhccC
Confidence            999999985    33678999999999987642 2223333333   22222   232 567899999999999999999


Q ss_pred             CCCCc-eE-EEeccccCHHHHHHHHHHhCC------CCCCCCCC------------CCCC----------CCccccccch
Q 020110          245 PAASG-RY-LCTNGIYQFGDFAERVSKLFP------EFPVHRFD------------GETQ----------PGLIPCKDAA  294 (331)
Q Consensus       245 ~~~~g-~~-~~~~~~~s~~e~~~~i~~~~~------~~~~~~~~------------~~~~----------~~~~~~~~~~  294 (331)
                      +...| +| .+++..+.+.|+++.+-+...      ..++|.+.            ....          ....+..++.
T Consensus       265 p~s~Gktye~vGP~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~vlt~  344 (391)
T KOG2865|consen  265 PDSMGKTYEFVGPDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLVLTG  344 (391)
T ss_pred             ccccCceeeecCCchhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhhcCC
Confidence            98888 79 677888999999998876541      11222111            0000          0011122222


Q ss_pred             -HHHHhhCCCccCHHHHHHHHHHHHHHcCC
Q 020110          295 -KRLMDLGLVFTPVEDAVRETVESLKAKGF  323 (331)
Q Consensus       295 -~k~~~lG~~~~~~~~~l~~~~~~~~~~~~  323 (331)
                       .++++||..++.+|...-+.+.-|+..+.
T Consensus       345 ~~tleDLgv~~t~le~~~~e~l~~yR~~~~  374 (391)
T KOG2865|consen  345 APTLEDLGVVLTKLELYPVEFLRQYRKGGR  374 (391)
T ss_pred             CCcHhhcCceeeecccccHHHHHHHhhccc
Confidence             23477899988888877777776666533

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.94  E-value=9.6e-26  Score=177.33  Aligned_cols=296  Identities=16%  Similarity=0.135  Sum_probs=221.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   84 (331)
                      ...+|||||+-|.+|..++..|..+ |...|+.-+..++... ..+       .-.++..|+.|...+++++-  .+|++
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-V~~-------~GPyIy~DILD~K~L~eIVVn~RIdWL  114 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-VTD-------VGPYIYLDILDQKSLEEIVVNKRIDWL  114 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-hcc-------cCCchhhhhhccccHHHhhccccccee
Confidence            3469999999999999999988775 6535665443333222 222       33478899999999998874  48999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcch
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (331)
                      ||..+.-+.-. +.+...+.++|+.|..|+++.|++++.+-||- ||++++++....  .|...-+...|.      ..|
T Consensus       115 ~HfSALLSAvG-E~NVpLA~~VNI~GvHNil~vAa~~kL~iFVP-STIGAFGPtSPR--NPTPdltIQRPR------TIY  184 (366)
T KOG2774|consen  115 VHFSALLSAVG-ETNVPLALQVNIRGVHNILQVAAKHKLKVFVP-STIGAFGPTSPR--NPTPDLTIQRPR------TIY  184 (366)
T ss_pred             eeHHHHHHHhc-ccCCceeeeecchhhhHHHHHHHHcCeeEeec-ccccccCCCCCC--CCCCCeeeecCc------eee
Confidence            99987654322 23345678999999999999999999875665 888666554333  344444444444      489


Q ss_pred             hHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCC--hhHHHHHH-HHcCCCCc--cCcCCCCceeHHHHHHHHH
Q 020110          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLN--ASCAVLQQ-LLQGSKDT--QEYHWLGAVPVKDVAKAQV  239 (331)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~--~~~~~~~~-~~~~~~~~--~~~~~~~~v~v~D~a~a~~  239 (331)
                      |.||..+|.+...+..++|+++.++|++.++......+..  .....+.. ..+|+-.-  .+|.+..++|.+||.++++
T Consensus       185 GVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~  264 (366)
T KOG2774|consen  185 GVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVI  264 (366)
T ss_pred             chhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHH
Confidence            9999999999999999999999999999998765433221  12233333 44554433  5889999999999999999


Q ss_pred             HhhcCCCCC---ceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCC--CCccccccchHHH-HhhCCCc-cCHHHHHH
Q 020110          240 LLFESPAAS---GRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQ--PGLIPCKDAAKRL-MDLGLVF-TPVEDAVR  312 (331)
Q Consensus       240 ~~l~~~~~~---g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~  312 (331)
                      .++..+...   .+||+++..+|-.|++..+.+.+|+..+.+.....+  .+.|...+|.+.+ ++..|+. .++...+.
T Consensus       265 ~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~  344 (366)
T KOG2774|consen  265 QLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSLHLLSIIS  344 (366)
T ss_pred             HHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHhhHHHHhhhhhHHHHHH
Confidence            998876543   269999999999999999999999888776655443  5678888999999 8899998 58888888


Q ss_pred             HHHHHHHHc
Q 020110          313 ETVESLKAK  321 (331)
Q Consensus       313 ~~~~~~~~~  321 (331)
                      -++...+.+
T Consensus       345 ~~i~~~~~n  353 (366)
T KOG2774|consen  345 TVVAVHKSN  353 (366)
T ss_pred             HHHHHHHhh
Confidence            888776655

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.9e-25  Score=190.96  Aligned_cols=232  Identities=22%  Similarity=0.215  Sum_probs=165.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Ccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   82 (331)
                      |+||||||+|+||++++++|+++|+ +|+++.|+......+....  .. ++.++.+|++|.+++.++++       ++|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARY--GD-RLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc--cC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999 9999998765433332221  11 68899999999988877664       479


Q ss_pred             EEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           83 GVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        83 ~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +|||+||.......    .+.....+++|+.++.++++++    ++.+.+++|++||..+..+.+.              
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  144 (276)
T PRK06482         79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPG--------------  144 (276)
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCC--------------
Confidence            99999997654221    2234667889999999999987    5567789999999644322111              


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcc---cCCCCCCCC------ChhHHHHHHHHcCCCCccC
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATC---LGPLMQPYL------NASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v---~G~~~~~~~------~~~~~~~~~~~~~~~~~~~  222 (331)
                            .+.|+.+|...|.+++.++++   ++++++++||+.+   ||++.....      ......+.+......    
T Consensus       145 ------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  214 (276)
T PRK06482        145 ------FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS----  214 (276)
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc----
Confidence                  147999999999999888765   6899999999988   555432110      001111222222211    


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhC
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLF  271 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~~-~~~s~~e~~~~i~~~~  271 (331)
                        ..-+.+++|++++++.++........|+++. ...++.|+++.+.+.+
T Consensus       215 --~~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  262 (276)
T PRK06482        215 --FAIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAAL  262 (276)
T ss_pred             --CCCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHH
Confidence              1124689999999999998665555686654 5578888888776655

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.93  E-value=1.1e-24  Score=186.05  Aligned_cols=224  Identities=18%  Similarity=0.167  Sum_probs=155.5

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.++|++|||||+|+||++++++|+++|+ +|+++.|++.......+.....+.++.++++|+++.+++.++++      
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34468999999999999999999999999 99999997754333222111111267889999999998877665      


Q ss_pred             -CccEEEEcccCCCCCC----CCCchhhhhHHHHHH----HHHHHHHH-HhCCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQG----TLNVLEAA-KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~-~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                       ++|+|||+|+......    ..+.....+++|+.+    +.++++++ +..+.+++|++||..+.++.+.         
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~---------  153 (262)
T PRK13394         83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPL---------  153 (262)
T ss_pred             CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCC---------
Confidence             3799999999764322    223346678899998    55666666 6667889999999654332211         


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCCh--------hHHHHHHHHcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGSK  218 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~--------~~~~~~~~~~~~~  218 (331)
                                 ...|+.+|...+.+++.++++   .+++++++||+.++++........        ....+.++..+  
T Consensus       154 -----------~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  220 (262)
T PRK13394        154 -----------KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG--  220 (262)
T ss_pred             -----------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhc--
Confidence                       137999999999888888755   489999999999999864221100        01112222211  


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                         +...++|++++|++++++.++....  ..| .|++++
T Consensus       221 ---~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~  257 (262)
T PRK13394        221 ---KTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSH  257 (262)
T ss_pred             ---CCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCC
Confidence               2245789999999999999987543  235 455554

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.93  E-value=2.3e-25  Score=188.83  Aligned_cols=255  Identities=25%  Similarity=0.199  Sum_probs=170.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC---C-------CCCCCcEEEEEccCCC------chH
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL---P-------GAGDANLRVFEADVLD------SGA   73 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~-------~~~~~~~~~~~~Dl~~------~~~   73 (331)
                      ++||+||||||+|++|+..|+..-.-+|+|++|..++.....++   .       +....+++++.+|+..      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            48999999999999999999987433999999977643332221   1       1223389999999984      356


Q ss_pred             HHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC-CCccccCCCCC
Q 020110           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWT  152 (331)
Q Consensus        74 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~-~~~~~~E~~~~  152 (331)
                      +.++.+.+|.|||+|+.++.   ..+..+....||.|+..+++.|...+.|.+.|+||+++....... .....+|.++.
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~  157 (382)
T COG3320          81 WQELAENVDLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPT  157 (382)
T ss_pred             HHHHhhhcceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccc
Confidence            77888899999999998774   455678899999999999999999989999999998543322221 01112222222


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC---ChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                      ... .....+.|+.||..+|.++++.... |++++|+|||+|-|+.....+   .++..++.....-...+......+.+
T Consensus       158 ~~~-~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~~~~  235 (382)
T COG3320         158 RNV-GQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSLDML  235 (382)
T ss_pred             ccc-cCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccchhhC
Confidence            211 1233468999999999999998854 999999999999999763222   22233333333333333223445555


Q ss_pred             eHHHHHHHHH-----------HhhcCCC-CCceEEE--eccccCHHHHHHHHHH
Q 020110          230 PVKDVAKAQV-----------LLFESPA-ASGRYLC--TNGIYQFGDFAERVSK  269 (331)
Q Consensus       230 ~v~D~a~a~~-----------~~l~~~~-~~g~~~~--~~~~~s~~e~~~~i~~  269 (331)
                      .++++++++.           .+..++. .-..|.+  -+..+...++.+.+.+
T Consensus       236 p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         236 PVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             ccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            5555544433           2222111 1123433  3566889999998887

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.93  E-value=3.7e-24  Score=181.29  Aligned_cols=229  Identities=20%  Similarity=0.229  Sum_probs=157.8

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc-hHHHHHh-cCccE
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAV-EGCKG   83 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~-~~~d~   83 (331)
                      +.+||+||||||||+||++++++|+++|+ +|+++.|++.........   .. +++++.+|+.+. +.+.+.+ .++|+
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~---~~-~~~~~~~Dl~d~~~~l~~~~~~~~d~   88 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQ---DP-SLQIVRADVTEGSDKLVEAIGDDSDA   88 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhccc---CC-ceEEEEeeCCCCHHHHHHHhhcCCCE
Confidence            34578999999999999999999999999 999999886543222111   11 688999999984 6677777 68999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhh-ccCc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK-SRKK  162 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~-~~~~  162 (331)
                      |||+++....    .++...++.|..++.++++++++.++++||++||.+ +|+....  .+..+      .+.. ....
T Consensus        89 vi~~~g~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~-v~g~~~~--~~~~~------~~~~~~~~~  155 (251)
T PLN00141         89 VICATGFRRS----FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL-VNGAAMG--QILNP------AYIFLNLFG  155 (251)
T ss_pred             EEECCCCCcC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc-ccCCCcc--cccCc------chhHHHHHH
Confidence            9999875321    123344678899999999999999999999999984 4432211  11111      1100 0112


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhh
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF  242 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l  242 (331)
                      .|...|..+|++++    +.+++++++||++++++.....  ..        ..   ........+|+.+|+|+++..++
T Consensus       156 ~~~~~k~~~e~~l~----~~gi~~~iirpg~~~~~~~~~~--~~--------~~---~~~~~~~~~i~~~dvA~~~~~~~  218 (251)
T PLN00141        156 LTLVAKLQAEKYIR----KSGINYTIVRPGGLTNDPPTGN--IV--------ME---PEDTLYEGSISRDQVAEVAVEAL  218 (251)
T ss_pred             HHHHHHHHHHHHHH----hcCCcEEEEECCCccCCCCCce--EE--------EC---CCCccccCcccHHHHHHHHHHHh
Confidence            35567888887765    5789999999999998643211  00        00   00011235799999999999999


Q ss_pred             cCCCCCc-eE-EEe---ccccCHHHHHHHHHH
Q 020110          243 ESPAASG-RY-LCT---NGIYQFGDFAERVSK  269 (331)
Q Consensus       243 ~~~~~~g-~~-~~~---~~~~s~~e~~~~i~~  269 (331)
                      ..+...+ ++ ++.   +...++.++...+++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        219 LCPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             cChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            8876544 45 443   223789999888765

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.93  E-value=5.8e-24  Score=219.72  Aligned_cols=256  Identities=23%  Similarity=0.194  Sum_probs=177.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC----CCEEEEEecCCCccchhhcCC----------CCCCCcEEEEEccCCCc---
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN----YTSINATVFPGSDSSHLFALP----------GAGDANLRVFEADVLDS---   71 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g----~~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~~~~Dl~~~---   71 (331)
                      .++|||||||||+|++++++|++++    + +|+++.|.........++.          .....+++++.+|++++   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~-~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNF-KVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCc-EEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            4689999999999999999999987    6 9999999754433222110          00011688999999754   


Q ss_pred             ---hHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC-------
Q 020110           72 ---GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-------  141 (331)
Q Consensus        72 ---~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~-------  141 (331)
                         +.+..+..++|+|||+|+....   ..+.......|+.++.+++++|++.++++|+|+||.+++......       
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhh
Confidence               4566777889999999998653   233444556899999999999999999999999998554321100       


Q ss_pred             --CCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCC---hhHHHHHHHHcC
Q 020110          142 --KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLN---ASCAVLQQLLQG  216 (331)
Q Consensus       142 --~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~---~~~~~~~~~~~~  216 (331)
                        ....+.|+++..+. .....+.|+.+|..+|.++..+.+ .|++++++||+.|||+.......   .+..++.....-
T Consensus      1127 ~~~~~~~~e~~~~~~~-~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~ 1204 (1389)
T TIGR03443      1127 QAGGAGIPESDDLMGS-SKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQL 1204 (1389)
T ss_pred             hccCCCCCcccccccc-cccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHh
Confidence              01224444332211 112235799999999999988764 59999999999999997543221   222223222222


Q ss_pred             CCCccCcCCCCceeHHHHHHHHHHhhcCCCC--Cc-eEEEec-cccCHHHHHHHHHHh
Q 020110          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPAA--SG-RYLCTN-GIYQFGDFAERVSKL  270 (331)
Q Consensus       217 ~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~--~g-~~~~~~-~~~s~~e~~~~i~~~  270 (331)
                      ...+.....++|++|+|++++++.++..+..  .+ +|++++ ..+++.++++.+.+.
T Consensus      1205 ~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1205 GLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             CCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence            2222334679999999999999998876532  22 676654 568999999999764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.93  E-value=3e-24  Score=173.13  Aligned_cols=183  Identities=30%  Similarity=0.387  Sum_probs=140.5

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcccCC
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPC   91 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~~~   91 (331)
                      |+|+||||++|+.++++|+++|+ +|+++.|++.+...  .     . +++++.+|+.|++++.+.+.++|+|||+++..
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~-----~-~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--S-----P-GVEIIQGDLFDPDSVKAALKGADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--C-----T-TEEEEESCTTCHHHHHHHHTTSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--c-----c-ccccceeeehhhhhhhhhhhhcchhhhhhhhh
Confidence            79999999999999999999999 99999999775444  1     1 89999999999999999999999999999753


Q ss_pred             CCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHH
Q 020110           92 TLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLA  171 (331)
Q Consensus        92 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~  171 (331)
                      ..             ....+.++++++++.+++++|++||.+. +.....  ....+..   +..     ..|...|..+
T Consensus        72 ~~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~-~~~~~~--~~~~~~~---~~~-----~~~~~~~~~~  127 (183)
T PF13460_consen   72 PK-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGV-YRDPPG--LFSDEDK---PIF-----PEYARDKREA  127 (183)
T ss_dssp             TT-------------HHHHHHHHHHHHHHTTSSEEEEEEETTG-TTTCTS--EEEGGTC---GGG-----HHHHHHHHHH
T ss_pred             cc-------------cccccccccccccccccccceeeecccc-CCCCCc--ccccccc---cch-----hhhHHHHHHH
Confidence            32             1677889999999999999999999743 332211  1111111   111     2688999999


Q ss_pred             HHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcC
Q 020110          172 EKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       172 e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      |+.++    +.+++++++||+.+||+..... .....            .+....++|+++|+|++++.++++
T Consensus       128 e~~~~----~~~~~~~ivrp~~~~~~~~~~~-~~~~~------------~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  128 EEALR----ESGLNWTIVRPGWIYGNPSRSY-RLIKE------------GGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             HHHHH----HSTSEEEEEEESEEEBTTSSSE-EEESS------------TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             HHHHH----hcCCCEEEEECcEeEeCCCcce-eEEec------------cCCCCcCcCCHHHHHHHHHHHhCC
Confidence            88885    6799999999999999974321 11000            223456999999999999988763

...

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.6e-24  Score=184.85  Aligned_cols=232  Identities=21%  Similarity=0.153  Sum_probs=167.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +|+||||||+|+||++++++|+++|+ +|++++|+......+....  .. .+.++.+|++|++++.++++       ++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKY--GD-RLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhc--cC-CeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 9999998765433332211  11 67888999999988876664       47


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+||......    ..+++...+++|+.++..+++++    ++.+.+++|++||..++.+.+..            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~------------  146 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMS------------  146 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCc------------
Confidence            99999999765422    22345778999999998888875    45567899999997555433221            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC------hhHHHHHHHHcCCCCccCcC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN------ASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~  224 (331)
                              ..|+.+|...+.+.+.++.+   +|++++++||+.+.++.......      ............      ..
T Consensus       147 --------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  212 (275)
T PRK08263        147 --------GIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ------WS  212 (275)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH------HH
Confidence                    37999999999988887754   68999999999998775421110      001110111110      01


Q ss_pred             CCCc-eeHHHHHHHHHHhhcCCCCCceEEEe-c-cccCHHHHHHHHHHh
Q 020110          225 WLGA-VPVKDVAKAQVLLFESPAASGRYLCT-N-GIYQFGDFAERVSKL  270 (331)
Q Consensus       225 ~~~~-v~v~D~a~a~~~~l~~~~~~g~~~~~-~-~~~s~~e~~~~i~~~  270 (331)
                      ...+ ++++|++++++.++..+...+.|++. + +.+++.++.+.+.+.
T Consensus       213 ~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        213 ERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             hccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence            2345 88999999999999988777766543 3 458888988888874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=2e-23  Score=176.70  Aligned_cols=217  Identities=19%  Similarity=0.192  Sum_probs=153.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhc-CCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +||+||||||||+||++|+++|+++|+ +|+++.|+.... ..... ...... ++.++.+|+.+++++.++++      
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGR-RAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            367999999999999999999999999 988877654332 11111 111112 68899999999998887764      


Q ss_pred             -CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|+|||+|+......    ..+.....+++|+.++.++++++    ++.+.+++|++||...+++....         
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~---------  153 (249)
T PRK12825         83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGR---------  153 (249)
T ss_pred             CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCc---------
Confidence             5799999999654322    22334677899999999999887    45578899999997665432221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+++.++++   .+++++++||+.++|+........  .....   ....    ....
T Consensus       154 -----------~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~--~~~~~---~~~~----~~~~  213 (249)
T PRK12825        154 -----------SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEE--AREAK---DAET----PLGR  213 (249)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccch--hHHhh---hccC----CCCC
Confidence                       37999999999998877654   589999999999999875432111  11111   0011    1234


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      +++++|+++++.+++....  ..| +|++++
T Consensus       214 ~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~  244 (249)
T PRK12825        214 SGTPEDIARAVAFLCSDASDYITGQVIEVTG  244 (249)
T ss_pred             CcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            8999999999999997653  345 565544

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.5e-23  Score=178.86  Aligned_cols=222  Identities=17%  Similarity=0.107  Sum_probs=155.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +++||||||+|+||++++++|+++|+ +|++++|++.....+....   +.++.++.+|++|.+++.++++       ++
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALH---PDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhc---CCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            56899999999999999999999999 9999999765443332221   1168889999999998877765       47


Q ss_pred             cEEEEcccCCCCCCCC----CchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+|+........    +.....+++|+.++.++++++.    +.+.+++|++||..+..+.++.            
T Consensus        80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~------------  147 (277)
T PRK06180         80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGI------------  147 (277)
T ss_pred             CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCc------------
Confidence            9999999975432211    2235668999999999999853    4456789999997554433221            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC----hhHHH---HHHHHcCCCCccCc
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN----ASCAV---LQQLLQGSKDTQEY  223 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~----~~~~~---~~~~~~~~~~~~~~  223 (331)
                              ..|+.+|...|.+.+.++.+   .|++++++||+.+.++.......    .....   ........   ...
T Consensus       148 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  216 (277)
T PRK06180        148 --------GYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR---EAK  216 (277)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH---Hhh
Confidence                    37999999999998887754   58999999999998875322110    01111   11110000   001


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCCCCceEEEeccc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGI  257 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~~~~  257 (331)
                      ....+..++|+|++++.++..+.....|..++..
T Consensus       217 ~~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~~  250 (277)
T PRK06180        217 SGKQPGDPAKAAQAILAAVESDEPPLHLLLGSDA  250 (277)
T ss_pred             ccCCCCCHHHHHHHHHHHHcCCCCCeeEeccHHH
Confidence            1234578999999999999877655566655444

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.92  E-value=2e-23  Score=176.99  Aligned_cols=219  Identities=24%  Similarity=0.226  Sum_probs=155.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +|+||||||+|+||++++++|+++|+ +|++++|+......... +..... ++.++.+|+.|++++.++++       +
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGG-KARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            56999999999999999999999999 99999998543322211 111112 68899999999998888775       5


Q ss_pred             ccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCcccee-ccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAI-VPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~-~~~~~~~~~~~~E~~~  151 (331)
                      +|+|||+++....    ....+++...++.|+.++.++++++.    +.+.++||++||..+. .+.+.           
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~-----------  152 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPG-----------  152 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCC-----------
Confidence            8999999987654    22233456789999999999998873    4467789999987443 11111           


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                               ...|+.+|...+.+++.++.+   .+++++++||+.++|+........  .+...+..+.+      ...+
T Consensus       153 ---------~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~  215 (251)
T PRK12826        153 ---------LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA--QWAEAIAAAIP------LGRL  215 (251)
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch--HHHHHHHhcCC------CCCC
Confidence                     137999999999999887654   489999999999999975332111  11112222211      2368


Q ss_pred             eeHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 020110          229 VPVKDVAKAQVLLFESPA--ASG-RYLCTNGI  257 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~~  257 (331)
                      ++++|+|+++..++....  ..| +|++.++.
T Consensus       216 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        216 GEPEDIAAAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             cCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            999999999998886543  245 56665543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.92  E-value=1.2e-23  Score=166.62  Aligned_cols=296  Identities=16%  Similarity=0.135  Sum_probs=216.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc--hhhcCCCC----CCCcEEEEEccCCCchHHHHHhcC--c
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALPGA----GDANLRVFEADVLDSGAVSRAVEG--C   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~--~   81 (331)
                      |..||||-||.-|+.|++.|+++|+ +|.++.|+.+..+  .+..++..    .+.......+|++|...+.+++..  +
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgY-eVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP  107 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGY-EVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP  107 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCc-eeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence            4689999999999999999999999 9999998665432  22222221    223677888999999999999874  6


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC---EEEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      +-|+|+|+..+...+.+-++-.-++...|+..|+++.+..+..   ||-..|| +..|+....  .|..|.+|..|..  
T Consensus       108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAst-SElyGkv~e--~PQsE~TPFyPRS--  182 (376)
T KOG1372|consen  108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQAST-SELYGKVQE--IPQSETTPFYPRS--  182 (376)
T ss_pred             hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEeccc-HhhcccccC--CCcccCCCCCCCC--
Confidence            8999999998875555556667788889999999999887532   5666665 488876554  6788999888875  


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhH----HHHHHHHcCCCC--ccCc--CCCCcee
Q 020110          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASC----AVLQQLLQGSKD--TQEY--HWLGAVP  230 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~----~~~~~~~~~~~~--~~~~--~~~~~v~  230 (331)
                          +|+.+|..+-.++..|.+.+++-.+.-.+++--.|....  ++..    .-+.++..|..-  ..|+  ..|||-|
T Consensus       183 ----PYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGe--nFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGh  256 (376)
T KOG1372|consen  183 ----PYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGE--NFVTRKITRSVAKISLGQQEKIELGNLSALRDWGH  256 (376)
T ss_pred             ----hhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCcccc--chhhHHHHHHHHHhhhcceeeEEecchhhhcccch
Confidence                999999999888888887787665544444444554332  2232    233344444432  2565  7899999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCC------CCCCCC----------CC----CCCCcccc
Q 020110          231 VKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEF------PVHRFD----------GE----TQPGLIPC  290 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~------~~~~~~----------~~----~~~~~~~~  290 (331)
                      ..|.++|++++++++.+....+.+++..|++|+++......+..      -+....          .+    .+.....+
T Consensus       257 A~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~L  336 (376)
T KOG1372|consen  257 AGDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTL  336 (376)
T ss_pred             hHHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhh
Confidence            99999999999999877765578899999999999877666310      000000          00    01123345


Q ss_pred             ccchHHH-HhhCCCc-cCHHHHHHHHHHH
Q 020110          291 KDAAKRL-MDLGLVF-TPVEDAVRETVES  317 (331)
Q Consensus       291 ~~~~~k~-~~lG~~~-~~~~~~l~~~~~~  317 (331)
                      ..|.+|+ +.|||+| ..+.+-+++|+..
T Consensus       337 qGdasKAk~~LgW~pkv~f~eLVkeMv~~  365 (376)
T KOG1372|consen  337 QGDASKAKKTLGWKPKVTFPELVKEMVAS  365 (376)
T ss_pred             cCChHHHHHhhCCCCccCHHHHHHHHHHh
Confidence            6788999 8899999 5999999999864

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.92  E-value=4.3e-23  Score=175.37  Aligned_cols=221  Identities=19%  Similarity=0.200  Sum_probs=152.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh-------cCc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-------EGC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~   81 (331)
                      ||++|||||+|+||++++++|+++|+ +|++++|+......+.......+.++.++.+|+.|.+++.+++       .++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999 9999999765433332211111116889999999998665544       457


Q ss_pred             cEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+|+.......    .++....++.|+.++..+++++    ++.+.+++|++||...+.+.+..            
T Consensus        80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~------------  147 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFK------------  147 (255)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCC------------
Confidence            999999987654221    1223556778999988888876    55677899999987554432221            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC--------hhHHHHHHHHcCCCCccC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~  222 (331)
                              ..|+.+|...+.+.+.++.+   .+++++++||+.++++.......        .....+....     ..+
T Consensus       148 --------~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  214 (255)
T TIGR01963       148 --------SAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVM-----LPG  214 (255)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHH-----Hcc
Confidence                    37999999999888877654   48999999999999985321000        0000000000     012


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      ...+++++++|+|++++.++....  ..| .|++++
T Consensus       215 ~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~  250 (255)
T TIGR01963       215 QPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDG  250 (255)
T ss_pred             CccccCcCHHHHHHHHHHHcCccccCccceEEEEcC
Confidence            356789999999999999997642  235 466654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.5e-23  Score=175.60  Aligned_cols=222  Identities=15%  Similarity=0.120  Sum_probs=152.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ..+|++|||||+|+||++++++|+++|+ +|+++.|+......... ...... ++.++.+|+++++++.++++      
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGG-EAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3457999999999999999999999999 99998886543222211 111112 68888999999998887665      


Q ss_pred             -CccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|+|||+|+.......    .+.....+++|+.++.++++++.    +.+..+||++||...+.+.+.          
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~----------  155 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPH----------  155 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC----------
Confidence             47999999987543221    22345667999999999988864    334568999999744332211          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCC-CCChhHHHHHHHHcCCCCccCcCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQP-YLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                ...|+.+|...|.+++.++++.   |++++++|||.+.++.... ........+......    .+....
T Consensus       156 ----------~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~  221 (274)
T PRK07775        156 ----------MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW----GQARHD  221 (274)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh----cccccc
Confidence                      1379999999999999887654   8999999999886653211 001111111111110    011246


Q ss_pred             CceeHHHHHHHHHHhhcCCCCCceEEEe
Q 020110          227 GAVPVKDVAKAQVLLFESPAASGRYLCT  254 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~~~~g~~~~~  254 (331)
                      .+++++|+|++++.++.++....+|++.
T Consensus       222 ~~~~~~dva~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        222 YFLRASDLARAITFVAETPRGAHVVNME  249 (274)
T ss_pred             cccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence            6999999999999999876433356654

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=7.4e-23  Score=174.25  Aligned_cols=221  Identities=19%  Similarity=0.189  Sum_probs=151.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +++||||||+|+||++++++|+++|+ +|++++|++.............+.++.++.+|+++++++.++++       .+
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46999999999999999999999999 99999998655433222111111278899999999998877765       57


Q ss_pred             cEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHH----HHhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+|+.......    .+.....+++|+.++.++++.    +++.+.++||++||...+++.++.            
T Consensus        83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~------------  150 (258)
T PRK12429         83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGK------------  150 (258)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCc------------
Confidence            999999987554222    222355677898885555554    455577899999997665543321            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCCh--------hHHHHHHHHcCCCCccC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~  222 (331)
                              ..|+.+|...+.+.+.++.+   .+++++++||+.+++|........        ..........     ..
T Consensus       151 --------~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  217 (258)
T PRK12429        151 --------AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLL-----PL  217 (258)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHh-----cc
Confidence                    37999999998888777644   479999999999999864321000        0000011110     01


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      ...+.+++++|+|+++..++....  ..| .|++++
T Consensus       218 ~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  253 (258)
T PRK12429        218 VPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDG  253 (258)
T ss_pred             CCccccCCHHHHHHHHHHHcCccccCccCCeEEeCC
Confidence            134679999999999998887643  235 455554

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-22  Score=171.49  Aligned_cols=231  Identities=18%  Similarity=0.145  Sum_probs=162.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      ++++|||||+|+||++++++|+++|+ +|++++|++.....+..... .. ++.++.+|+.|.+++.++++       ++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALG-DA-RFVPVACDLTDAASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc-CC-ceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999 99999997654333222111 11 68899999999998877765       37


Q ss_pred             cEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+++.......    .+.....+++|+.++.++++++    .+.+.+++|++||...... .+.            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~------------  145 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGH------------  145 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCC------------
Confidence            999999987543211    1222445679999999988877    3345678999998633211 110            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                              ..|+.+|...+.+++.++++.   ++++++++|+.++++...........+.......      ....+|++
T Consensus       146 --------~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  211 (257)
T PRK07074        146 --------PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW------YPLQDFAT  211 (257)
T ss_pred             --------cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc------CCCCCCCC
Confidence                    269999999999998887554   7999999999999886432111111222222111      13468999


Q ss_pred             HHHHHHHHHHhhcCC--CCCce-EEEe-ccccCHHHHHHHHHH
Q 020110          231 VKDVAKAQVLLFESP--AASGR-YLCT-NGIYQFGDFAERVSK  269 (331)
Q Consensus       231 v~D~a~a~~~~l~~~--~~~g~-~~~~-~~~~s~~e~~~~i~~  269 (331)
                      ++|+++++..++...  ...|. +++. +...+.+|+++.+.+
T Consensus       212 ~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        212 PDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            999999999999653  23464 4454 455789999998765

>PRK09135 pteridine reductase; Provisional

Probab=99.90  E-value=4.5e-22  Score=168.45  Aligned_cols=219  Identities=19%  Similarity=0.165  Sum_probs=147.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .++||||||+||||++++++|+++|+ +|+++.|+.... ..+. .+....+..+.++.+|+++.+++.++++       
T Consensus         6 ~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          6 AKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 999998864321 1111 1111111158889999999998887775       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      ++|+|||+|+......    ..+++...+++|+.++.++++++...   ....++++||...              ..+.
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~  150 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA--------------ERPL  150 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh--------------cCCC
Confidence            4799999998654321    12335678899999999999998643   2235666554321              1111


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                      .+      ...|+.+|...|.+++.++++.  +++++++||+.++||.......  .........+.+.      ..+.+
T Consensus       151 ~~------~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~  216 (249)
T PRK09135        151 KG------YPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFD--EEARQAILARTPL------KRIGT  216 (249)
T ss_pred             CC------chhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCC--HHHHHHHHhcCCc------CCCcC
Confidence            11      2379999999999999988764  6999999999999998643222  1222233333221      22335


Q ss_pred             HHHHHHHHHHhhcCC-CCCc-eEEEecc
Q 020110          231 VKDVAKAQVLLFESP-AASG-RYLCTNG  256 (331)
Q Consensus       231 v~D~a~a~~~~l~~~-~~~g-~~~~~~~  256 (331)
                      ++|+|+++..++... ...| +|+++++
T Consensus       217 ~~d~a~~~~~~~~~~~~~~g~~~~i~~g  244 (249)
T PRK09135        217 PEDIAEAVRFLLADASFITGQILAVDGG  244 (249)
T ss_pred             HHHHHHHHHHHcCccccccCcEEEECCC
Confidence            899999996666433 3345 6766543

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-22  Score=174.52  Aligned_cols=226  Identities=20%  Similarity=0.163  Sum_probs=156.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--CCCCcEEEEEccCCCchHHHHHh-------c
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANLRVFEADVLDSGAVSRAV-------E   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~-------~   79 (331)
                      ++++|||||+|+||+++++.|+++|+ +|++++|++...........  ..+.++.++.+|++|++++.+ +       .
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            46899999999999999999999999 99999987654433322111  011268899999999988765 4       2


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      .+|+|||+|+......    ..+.....+++|+.++.++++++    ++.+.+++|++||..+.++.++.          
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~----------  150 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGL----------  150 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCC----------
Confidence            4799999998755321    12234567889999998888875    55567899999997555443321          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHH---HHcCCeEEEEcCCcccCCCCCCCCC----------hhHHHHHHHHcCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLN----------ASCAVLQQLLQGSK  218 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~~~~~~lR~~~v~G~~~~~~~~----------~~~~~~~~~~~~~~  218 (331)
                                ..|+.+|...+.+++.++   ..++++++++|||.+.++.......          .....+.++...  
T Consensus       151 ----------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  218 (280)
T PRK06914        151 ----------SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH--  218 (280)
T ss_pred             ----------chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH--
Confidence                      379999999999888876   3468999999999999884321100          001111111100  


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCCCCCceEEEe-ccccCH
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQF  260 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~-~~~~s~  260 (331)
                        .......+++++|+|++++.++.++.....|+++ +..+++
T Consensus       219 --~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (280)
T PRK06914        219 --INSGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMI  259 (280)
T ss_pred             --HhhhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHH
Confidence              0112345789999999999999987665566665 344443

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.3e-22  Score=168.90  Aligned_cols=222  Identities=22%  Similarity=0.224  Sum_probs=157.9

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      |+++...+.++++||||+|+||+++++.|+++|+ +|++++|+......+....     +..++.+|+++.+++.++++ 
T Consensus         1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~   74 (245)
T PRK07060          1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA   74 (245)
T ss_pred             CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH
Confidence            6666555568999999999999999999999999 9999998765443332211     45678899999988887775 


Q ss_pred             --CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCccccC
Q 020110           80 --GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                        .+|+|||+|+......    ..++....+..|+.++.++++++.+.    + .++||++||...+++.+..       
T Consensus        75 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------  147 (245)
T PRK07060         75 AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDH-------  147 (245)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCC-------
Confidence              4899999998754321    12334566789999999999987643    2 3689999997655443221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                   ..|+.+|...|.+++.++++   .+++++.+||+.++++........ ......+...      ...
T Consensus       148 -------------~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~------~~~  207 (245)
T PRK07060        148 -------------LAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD-PQKSGPMLAA------IPL  207 (245)
T ss_pred             -------------cHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC-HHHHHHHHhc------CCC
Confidence                         37999999999999988765   479999999999999864221111 0111111111      123


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g~-~~~~~  255 (331)
                      ..+++++|+++++..++..+.  ..|. +++.+
T Consensus       208 ~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK07060        208 GRFAEVDDVAAPILFLLSDAASMVSGVSLPVDG  240 (245)
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCccCcEEeECC
Confidence            568999999999999987653  2354 45543

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.90  E-value=4.3e-23  Score=175.56  Aligned_cols=224  Identities=16%  Similarity=0.114  Sum_probs=155.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.+++|||||+|+||+++++.|+++|+ +|++++|+......+.+..  .. ++.++.+|++|++++.++++       
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEI--GP-AAIAVSLDVTRQDSIDRIVAAAVERFG   79 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHh--CC-ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3457899999999999999999999999 9999998765443332211  11 68889999999988887765       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhCC-----CCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFG-----VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .+|++||+|+.....    ...+++...+++|+.++.++++++....     -.++|++||....++.+.          
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------  149 (257)
T PRK07067         80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEAL----------  149 (257)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCC----------
Confidence            479999999875432    1234457789999999999999885431     247999999754433221          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHH----HHHHcCCCCccCc
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVL----QQLLQGSKDTQEY  223 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~----~~~~~~~~~~~~~  223 (331)
                                ...|+.+|...+.+.+.++.+   +++++++++|+.++++.............    .....  ....+.
T Consensus       150 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  217 (257)
T PRK07067        150 ----------VSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKR--LVGEAV  217 (257)
T ss_pred             ----------CchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHH--HHhhcC
Confidence                      137999999999999888764   68999999999999985322100000000    00000  000112


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ....+.+++|+|+++..++....  ..| ++++.++
T Consensus       218 ~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  253 (257)
T PRK07067        218 PLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGG  253 (257)
T ss_pred             CCCCccCHHHHHHHHHHHhCcccccccCcEEeecCC
Confidence            35679999999999999887643  234 5666543

>PRK06182 short chain dehydrogenase; Validated

Probab=99.90  E-value=4.1e-22  Score=171.08  Aligned_cols=214  Identities=19%  Similarity=0.188  Sum_probs=150.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +|+++||||+|+||++++++|+++|+ +|+++.|+......+...      +++++.+|++|++++.++++       ++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i   75 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASL------GVHPLSLDVTDEASIKAAVDTIIAEEGRI   75 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhC------CCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999 999999986543333221      67889999999998887775       68


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHH----HHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVL----EAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+||......    ..+++...+++|+.++..++    ..+++.+.+++|++||..+..+.+..            
T Consensus        76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~------------  143 (273)
T PRK06182         76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLG------------  143 (273)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCc------------
Confidence            99999999754321    22345778899998855544    45566677899999996442222111            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCC---------hhHH----HHHHHHcCC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLN---------ASCA----VLQQLLQGS  217 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~---------~~~~----~~~~~~~~~  217 (331)
                              ..|+.+|...+.+.+.++.   ..+++++++||+.+.++.......         ....    ....+... 
T Consensus       144 --------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  214 (273)
T PRK06182        144 --------AWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRST-  214 (273)
T ss_pred             --------cHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHh-
Confidence                    2699999999998776653   458999999999999875321000         0000    00011000 


Q ss_pred             CCccCcCCCCceeHHHHHHHHHHhhcCCCCCceEEEec
Q 020110          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTN  255 (331)
Q Consensus       218 ~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~~  255 (331)
                           .....+.+++|+|++++.++........|+++.
T Consensus       215 -----~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~  247 (273)
T PRK06182        215 -----YGSGRLSDPSVIADAISKAVTARRPKTRYAVGF  247 (273)
T ss_pred             -----hccccCCCHHHHHHHHHHHHhCCCCCceeecCc
Confidence                 023457899999999999998655445666544

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.8e-22  Score=170.92  Aligned_cols=222  Identities=19%  Similarity=0.135  Sum_probs=152.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+++|||||+|+||++++++|+++|+ +|+++.|+.... ..+. .+..... ++.++.+|+++++++.++++       
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGG-RASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            47999999999999999999999999 999988865321 1111 1111111 67889999999998877664       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCChhhh
Q 020110           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (331)
                      ++|+|||+|+....  ...++...+++|+.++.++++++...  ...++|++||....+...       .+..   +.  
T Consensus        84 ~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-------~~~~---~~--  149 (248)
T PRK07806         84 GLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT-------VKTM---PE--  149 (248)
T ss_pred             CCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc-------ccCC---cc--
Confidence            58999999986432  12335677899999999999999865  235899999853321110       0111   11  


Q ss_pred             hccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC-hhHHHHHHHHcCCCCccCcCCCCceeHHH
Q 020110          158 KSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (331)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  233 (331)
                         ...|+.+|...|.+++.++.+   .++++++++|+.+-++....... .....+..    ...    ....+++++|
T Consensus       150 ---~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~d  218 (248)
T PRK07806        150 ---YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEA----RRE----AAGKLYTVSE  218 (248)
T ss_pred             ---ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHH----HHh----hhcccCCHHH
Confidence               137999999999999888654   58999999998777663211000 00000000    000    1247899999


Q ss_pred             HHHHHHHhhcCCCCCc-eEEEeccc
Q 020110          234 VAKAQVLLFESPAASG-RYLCTNGI  257 (331)
Q Consensus       234 ~a~a~~~~l~~~~~~g-~~~~~~~~  257 (331)
                      +|++++.++......| +|++++..
T Consensus       219 va~~~~~l~~~~~~~g~~~~i~~~~  243 (248)
T PRK07806        219 FAAEVARAVTAPVPSGHIEYVGGAD  243 (248)
T ss_pred             HHHHHHHHhhccccCccEEEecCcc
Confidence            9999999998776677 57766654

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.2e-22  Score=170.82  Aligned_cols=235  Identities=17%  Similarity=0.109  Sum_probs=155.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++.+|+........ ++... +.++.++.+|++|++++.++++      
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAE-GFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-CCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            3467999999999999999999999999 9999988764433222 11111 1167889999999998887764      


Q ss_pred             -CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCC-CCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFG-VRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                       .+|+|||+||......    ..+.....+++|+.++.++++++.    +.+ .+++|++||..++.+.+..        
T Consensus        82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~--------  153 (275)
T PRK05876         82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGL--------  153 (275)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCC--------
Confidence             3799999999754322    223346678999999999998874    333 4689999997554332221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCC-ccC--c
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD-TQE--Y  223 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~--~  223 (331)
                                  ..|+.+|...+.+.+.++.   ..|+++++++|+.+.++.......   ............ ..+  .
T Consensus       154 ------------~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~  218 (275)
T PRK05876        154 ------------GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSER---IRGAACAQSSTTGSPGPLP  218 (275)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhh---hcCcccccccccccccccc
Confidence                        3799999976555555443   358999999999998875322100   000000000111 112  1


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHh
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKL  270 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~  270 (331)
                      ..+++++++|+|++++.++....   .|++. .+....++.+...+.
T Consensus       219 ~~~~~~~~~dva~~~~~ai~~~~---~~~~~-~~~~~~~~~~~~~~~  261 (275)
T PRK05876        219 LQDDNLGVDDIAQLTADAILANR---LYVLP-HAASRASIRRRFERI  261 (275)
T ss_pred             ccccCCCHHHHHHHHHHHHHcCC---eEEec-ChhhHHHHHHHHHHH
Confidence            35678999999999999987542   35444 334444555444443

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.1e-22  Score=170.22  Aligned_cols=221  Identities=20%  Similarity=0.198  Sum_probs=151.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.+++|||||+|+||++++++|+++|+ +|+++.|+......+..... .. ++.++.+|++|++++..+++       
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLP-GA-KVTATVADVADPAQVERVFDTAVERFG   85 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHh-cC-ceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3457999999999999999999999999 99999997654333222111 11 46889999999988877664       


Q ss_pred             CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCC-CEEEEeCccceeccCCCCCCccccCC
Q 020110           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGV-RRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 ~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                      ++|+|||+|+....     ....+.....++.|+.++.++++++.    ..+. ++++++||.....+.+..        
T Consensus        86 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~--------  157 (264)
T PRK12829         86 GLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGR--------  157 (264)
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCC--------
Confidence            58999999997622     11223347789999999999988773    3344 568888876443332221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCCh--------hHHHHHHHHcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGSK  218 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~--------~~~~~~~~~~~~~  218 (331)
                                  ..|+.+|...|.+++.++.+   .+++++++||++++|+........        ...........  
T Consensus       158 ------------~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  223 (264)
T PRK12829        158 ------------TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEK--  223 (264)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhc--
Confidence                        26999999999999887754   489999999999999864221000        00000000000  


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                          .....+++++|+++++..++...  ...| .|+++++
T Consensus       224 ----~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g  260 (264)
T PRK12829        224 ----ISLGRMVEPEDIAATALFLASPAARYITGQAISVDGN  260 (264)
T ss_pred             ----CCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCC
Confidence                12346899999999998887643  2245 4555543

>PRK06194 hypothetical protein; Provisional

Probab=99.90  E-value=3e-22  Score=173.21  Aligned_cols=216  Identities=13%  Similarity=0.051  Sum_probs=148.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++++||||||+|+||++++++|+++|+ +|++++|+........ ++... +.++.++.+|++|.+++.++++       
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQ-GAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999 9999998754332222 11111 1268889999999999888775       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCC------CEEEEeCccceeccCCCCCCcc
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGV------RRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~------~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                      .+|+|||+||......    ..+.+...+++|+.++.++++++    .+.+.      +++|++||..++++.+..    
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----  158 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAM----  158 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCC----
Confidence            4799999999865421    22334667899999999977774    33332      589999997665433221    


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc-----CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-----GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (331)
                                      ..|+.+|...+.+++.++.+.     ++++..+.|+.+..+....            ..+.+..
T Consensus       159 ----------------~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~------------~~~~~~~  210 (287)
T PRK06194        159 ----------------GIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS------------ERNRPAD  210 (287)
T ss_pred             ----------------cchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc------------cccCchh
Confidence                            379999999999998887654     3677777877665543211            1112221


Q ss_pred             ---cCcCCCCceeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhC
Q 020110          221 ---QEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (331)
Q Consensus       221 ---~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~  271 (331)
                         .+.+.++|++++|++.++....              .++..|+++.+.+.+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~s~~dva~~i~~~~  250 (287)
T PRK06194        211 LANTAPPTRSQLIAQAMSQKAVGSG--------------KVTAEEVAQLVFDAI  250 (287)
T ss_pred             cccCccccchhhHHHHHHHhhhhcc--------------CCCHHHHHHHHHHHH
Confidence               2236677888888777653221              157777777777755

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6e-22  Score=168.27  Aligned_cols=218  Identities=18%  Similarity=0.158  Sum_probs=148.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEE-ecCCCccchh-hcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .++|+||||+|+||++++++|+++|+ +|+++ .|+....... ........ .+.++.+|++|++++.++++       
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGG-KAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            47999999999999999999999999 88775 4554322111 11111111 68889999999998877765       


Q ss_pred             ------CccEEEEcccCCCCCCCCC----chhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ------GCKGVFHVASPCTLEDPVD----PEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ------~~d~vih~a~~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                            ++|+|||+||........+    .....+++|+.++.++++++...  +.+++|++||..++.+.++.      
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~------  157 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGS------  157 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCC------
Confidence                  4899999999754422222    22556779999999999988753  34589999987553322221      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                    ..|+.+|...+.+.+.++++   .++++++++|+.+.++....... ... +.......     ..
T Consensus       158 --------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~-~~~~~~~~-----~~  216 (254)
T PRK12746        158 --------------IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD-DPE-IRNFATNS-----SV  216 (254)
T ss_pred             --------------cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc-Chh-HHHHHHhc-----CC
Confidence                          37999999999998887754   57999999999999885422100 001 11111111     11


Q ss_pred             CCCceeHHHHHHHHHHhhcCCCC--Cc-eEEEec
Q 020110          225 WLGAVPVKDVAKAQVLLFESPAA--SG-RYLCTN  255 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~~~--~g-~~~~~~  255 (331)
                      ...+++++|+++++..++.....  .| .|++.+
T Consensus       217 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~  250 (254)
T PRK12746        217 FGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSG  250 (254)
T ss_pred             cCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence            24577999999999888876432  34 565544

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.90  E-value=8.2e-22  Score=178.98  Aligned_cols=231  Identities=18%  Similarity=0.162  Sum_probs=158.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------C-CCCCcEEEEEccCCCchHHHHHh
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------G-AGDANLRVFEADVLDSGAVSRAV   78 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------~-~~~~~~~~~~~Dl~~~~~~~~~~   78 (331)
                      +.++||||||+|+||++++++|++.|+ +|+++.|+......+....        + ....+++++.+|+.|.+++.+.+
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            356899999999999999999999999 9999999865543322110        0 00115889999999999999999


Q ss_pred             cCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           79 EGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        79 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      .++|+|||++|....  ...+....+++|+.++.+++++++..++++||++||.++...  +     ..+.. ...    
T Consensus       158 ggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~--g-----~p~~~-~~s----  223 (576)
T PLN03209        158 GNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKV--G-----FPAAI-LNL----  223 (576)
T ss_pred             cCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhccc--C-----ccccc-hhh----
Confidence            999999999986432  112345678899999999999999999999999999744210  1     01100 011    


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc-CCCCceeHHHHHHH
Q 020110          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY-HWLGAVPVKDVAKA  237 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~D~a~a  237 (331)
                        ...|...|..+|+.+.    ..|+++++||||.++++.......   ..+.       ....+ .....+..+|+|++
T Consensus       224 --k~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~~t---~~v~-------~~~~d~~~gr~isreDVA~v  287 (576)
T PLN03209        224 --FWGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET---HNLT-------LSEEDTLFGGQVSNLQVAEL  287 (576)
T ss_pred             --HHHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCccccccc---ccee-------eccccccCCCccCHHHHHHH
Confidence              1257778888888775    679999999999999875431100   0000       00111 11235889999999


Q ss_pred             HHHhhcCCC-CCc-eE-EEeccc---cCHHHHHHHHHH
Q 020110          238 QVLLFESPA-ASG-RY-LCTNGI---YQFGDFAERVSK  269 (331)
Q Consensus       238 ~~~~l~~~~-~~g-~~-~~~~~~---~s~~e~~~~i~~  269 (331)
                      ++.++.++. ..+ +| ++++..   .++.++.+.|-.
T Consensus       288 VvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~ip~  325 (576)
T PLN03209        288 MACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKIPS  325 (576)
T ss_pred             HHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhccc
Confidence            999998664 334 56 444432   456666665543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-21  Score=167.26  Aligned_cols=219  Identities=18%  Similarity=0.079  Sum_probs=148.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+........++..... ++.++.+|+++.+++.++++       +
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGG-EALALTADLETYAGAQAAMAAAVEAFGR   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCC-eEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 99999887532222222211112 67889999999888776664       4


Q ss_pred             ccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|++||+|+....     ....++....+++|+.++..+++++    ++.+.+++|++||... ++. .           
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~-~-----------  151 (260)
T PRK12823         85 IDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIAT-RGI-N-----------  151 (260)
T ss_pred             CeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccc-cCC-C-----------
Confidence            7999999985321     1223334667889988887665544    4456678999999743 211 0           


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCC---------C-CCChhHHHHHHHHcCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQ---------P-YLNASCAVLQQLLQGSK  218 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~---------~-~~~~~~~~~~~~~~~~~  218 (331)
                               ..+|+.+|...+.+.+.++.+.   ++++++++|+.+++|...         . .......+..+...+.+
T Consensus       152 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (260)
T PRK12823        152 ---------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSL  222 (260)
T ss_pred             ---------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCC
Confidence                     1279999999999999887664   899999999999997411         0 00111222333333222


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      .      .-+.+++|+|+++++++....  ..| .+++.++
T Consensus       223 ~------~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  257 (260)
T PRK12823        223 M------KRYGTIDEQVAAILFLASDEASYITGTVLPVGGG  257 (260)
T ss_pred             c------ccCCCHHHHHHHHHHHcCcccccccCcEEeecCC
Confidence            1      234578999999999886542  345 4555443

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.90  E-value=5.8e-22  Score=167.41  Aligned_cols=218  Identities=23%  Similarity=0.193  Sum_probs=153.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC-------c
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------C   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~   81 (331)
                      +|+||||||+|+||++++++|+++|+ +|+++.|++.............+.++.++.+|+.|++++.+++++       +
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            46999999999999999999999999 899999986553332211111111688899999999888776653       5


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+++......    ..+.....++.|+.++.++++++.    +.+.+++|++||....++...             
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~-------------  150 (246)
T PRK05653         84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPG-------------  150 (246)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCC-------------
Confidence            99999998754421    122235678899999999988874    456789999999755433221             


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                             ...|+.+|...+.+.+.++++   .+++++++||+.++|+.....   ............      ....+++
T Consensus       151 -------~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~---~~~~~~~~~~~~------~~~~~~~  214 (246)
T PRK05653        151 -------QTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL---PEEVKAEILKEI------PLGRLGQ  214 (246)
T ss_pred             -------CcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh---hHHHHHHHHhcC------CCCCCcC
Confidence                   137999999999888887654   479999999999999875321   111111111111      2366889


Q ss_pred             HHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          231 VKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ++|+++++..++....  ..| .|.++++
T Consensus       215 ~~dva~~~~~~~~~~~~~~~g~~~~~~gg  243 (246)
T PRK05653        215 PEEVANAVAFLASDAASYITGQVIPVNGG  243 (246)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence            9999999999986533  245 4555543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=6.9e-22  Score=167.95  Aligned_cols=221  Identities=19%  Similarity=0.161  Sum_probs=154.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|+||||||+|+||++++++|+++|+ +|++++|+..............+.++.++.+|++|++++.++++       
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3468999999999999999999999999 99999987654332221111111258889999999998887775       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      .+|+|||+|+......    ..+.....+++|+.++.++++++.+.    +.+++|++||.....+.++           
T Consensus        87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-----------  155 (255)
T PRK07523         87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPG-----------  155 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCC-----------
Confidence            3799999999764322    12223667889999999999988643    5678999998644322111           


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                               ...|+.+|...+.+.+.++.   .+|++++++||+.+.++....... .......+....      ....+
T Consensus       156 ---------~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~------~~~~~  219 (255)
T PRK07523        156 ---------IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFSAWLEKRT------PAGRW  219 (255)
T ss_pred             ---------CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHHHHHHhcC------CCCCC
Confidence                     13799999999999988875   458999999999999986432111 111111222221      12457


Q ss_pred             eeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          229 VPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      ..++|+|++++.++....  ..| .+++.+
T Consensus       220 ~~~~dva~~~~~l~~~~~~~~~G~~i~~~g  249 (255)
T PRK07523        220 GKVEELVGACVFLASDASSFVNGHVLYVDG  249 (255)
T ss_pred             cCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence            789999999999987533  345 455543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.90  E-value=5.9e-22  Score=167.60  Aligned_cols=217  Identities=19%  Similarity=0.130  Sum_probs=151.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC-Cccchh-hcCCCCCCCcEEEEEccCCCchHHHHHhcC------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVEG------   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------   80 (331)
                      ++++|||||+|+||++++++|++.|+ +|+++.++. ...... ..+..... ++.++.+|+++++++.+++++      
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGH-DVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999 888765432 222221 11111112 688999999999988877754      


Q ss_pred             -ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 -CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 -~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                       +|+|||+|+......    ..+.....+++|+.++.++++++..    .+.+++|++||..+.++.++.          
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------  153 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQ----------  153 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCC----------
Confidence             799999999755321    1244577899999999999998864    345689999997554432221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++.+   .++++++++|+.+.++.....   ..........+.      ..+.+
T Consensus       154 ----------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~------~~~~~  214 (247)
T PRK12935        154 ----------TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV---PEEVRQKIVAKI------PKKRF  214 (247)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc---cHHHHHHHHHhC------CCCCC
Confidence                      37999999998888777654   489999999999987643211   111112222221      34678


Q ss_pred             eeHHHHHHHHHHhhcCCC-CCc-eEEEecc
Q 020110          229 VPVKDVAKAQVLLFESPA-ASG-RYLCTNG  256 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~-~~g-~~~~~~~  256 (331)
                      .+++|++++++++++... ..| .|++.++
T Consensus       215 ~~~edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        215 GQADEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             cCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence            999999999999887542 344 5666554

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=166.39  Aligned_cols=220  Identities=20%  Similarity=0.145  Sum_probs=153.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|+++||||+|+||++++++|+++|+ +|+++.|+............. +.++.++++|++|++++.++++       +
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAA-GGRAFARQGDVGSAEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 999999876443222211111 1268899999999998887764       5


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+++......    ..+.....+++|+.++.++.+++    ++.+.+++|++||..+.++.++.           
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-----------  150 (252)
T PRK06138         82 LDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGR-----------  150 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCc-----------
Confidence            799999999754321    22234556889999987776655    45567899999998665543321           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCCh--hHHHHHHHHcCCCCccCcCCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNA--SCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                               ..|+.+|...+.+++.++.+.   +++++++||+.++++........  ....+.....+.     .....
T Consensus       151 ---------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  216 (252)
T PRK06138        151 ---------AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR-----HPMNR  216 (252)
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc-----CCCCC
Confidence                     379999999999999887554   89999999999998864321100  011111111111     01224


Q ss_pred             ceeHHHHHHHHHHhhcCCCC--CceE-EEe
Q 020110          228 AVPVKDVAKAQVLLFESPAA--SGRY-LCT  254 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~~--~g~~-~~~  254 (331)
                      +++++|+++++..++.....  .|.+ .+.
T Consensus       217 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~  246 (252)
T PRK06138        217 FGTAEEVAQAALFLASDESSFATGTTLVVD  246 (252)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCCEEEEC
Confidence            78999999999999877543  4543 443

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=8.4e-22  Score=167.15  Aligned_cols=221  Identities=14%  Similarity=0.076  Sum_probs=149.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cch-hhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++++||||||+|+||++++++|+++|+ +|++..|+... ... ......... ++.++.+|+++++++..+++      
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGG-EGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCC-eeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 88877654321 111 111111111 56788999999988777664      


Q ss_pred             -CccEEEEcccCCCCCCCC----CchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 -GCKGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                       .+|+|||+||........    +.....+++|+.++.++++++.+.  ..++||++||..++.+.++            
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------  150 (252)
T PRK06077         83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYG------------  150 (252)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCC------------
Confidence             579999999974432211    112567899999999999988754  2358999999754332221            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                              ...|+.+|...|.+.+.++++.  ++++.+++|+.+.++...................  .   .....+++
T Consensus       151 --------~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~  217 (252)
T PRK06077        151 --------LSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEK--F---TLMGKILD  217 (252)
T ss_pred             --------chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHh--c---CcCCCCCC
Confidence                    1379999999999999888665  6899999999998875321100000000011100  0   12346899


Q ss_pred             HHHHHHHHHHhhcCCCCCc-eEEEec
Q 020110          231 VKDVAKAQVLLFESPAASG-RYLCTN  255 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~~~g-~~~~~~  255 (331)
                      ++|+|+++..++......| +|++++
T Consensus       218 ~~dva~~~~~~~~~~~~~g~~~~i~~  243 (252)
T PRK06077        218 PEEVAEFVAAILKIESITGQVFVLDS  243 (252)
T ss_pred             HHHHHHHHHHHhCccccCCCeEEecC
Confidence            9999999999997665545 666554

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=168.80  Aligned_cols=235  Identities=24%  Similarity=0.202  Sum_probs=161.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCC-CCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .|++|||||+|+||+++++.|+++|+ +|+++.|+........ .+... ...++.++.+|+.|++++.++++       
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47999999999999999999999999 9999998754432221 11110 01168889999999988887765       


Q ss_pred             CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .+|+|||+|+....     ....++....+++|+.++.++++++.+.    +..+||++||.....+.+.          
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------  155 (276)
T PRK05875         86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRW----------  155 (276)
T ss_pred             CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCC----------
Confidence            57999999986422     1122234677899999999998876543    3458999999744221111          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                .+.|+.+|...|.+++.++++.   +++++++||+.+.++....... ............      ....
T Consensus       156 ----------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~  218 (276)
T PRK05875        156 ----------FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPELSADYRACT------PLPR  218 (276)
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHHHHHHHcCC------CCCC
Confidence                      1379999999999999887654   6999999999998775422111 111112222111      1234


Q ss_pred             ceeHHHHHHHHHHhhcCCCC--Cc-eEEEe-cccc----CHHHHHHHHHHhC
Q 020110          228 AVPVKDVAKAQVLLFESPAA--SG-RYLCT-NGIY----QFGDFAERVSKLF  271 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~~--~g-~~~~~-~~~~----s~~e~~~~i~~~~  271 (331)
                      +++++|+|+++.+++..+..  .| .+++. +..+    ++.|+++.+.+..
T Consensus       219 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~  270 (276)
T PRK05875        219 VGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGAD  270 (276)
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHH
Confidence            67899999999999976543  35 46554 4444    7778887776543

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.7e-21  Score=164.89  Aligned_cols=204  Identities=20%  Similarity=0.177  Sum_probs=146.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhh----cCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLF----ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      +|+++||||+|+||+++++.|+++|+ +|+++.|..... ....    +...... ++.++.+|+.+.+++.++++    
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGA-DVIVLDIHPMRGRAEADAVAAGIEAAGG-KALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEcCcccccHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999999 998876643211 1111    1111112 68899999999988877763    


Q ss_pred             ---CccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHH-----hCCCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK-----RFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ---~~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                         ++|+|||+|+....    ....++....+++|+.++.++++++.     +.+.+++|++||...+++..+.      
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------  157 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQ------  157 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCC------
Confidence               58999999997652    12223346678999999999999987     4566789999997665543221      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                    ..|+.+|...+.+++.++.+   .+++++++||+.+.++......  ..   .......+      
T Consensus       158 --------------~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--~~---~~~~~~~~------  212 (249)
T PRK12827        158 --------------VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA--PT---EHLLNPVP------  212 (249)
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc--hH---HHHHhhCC------
Confidence                          37999999999888887654   4899999999999998653321  11   11111111      


Q ss_pred             CCCceeHHHHHHHHHHhhcCC
Q 020110          225 WLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      ...+.+++|+++++..++...
T Consensus       213 ~~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        213 VQRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             CcCCcCHHHHHHHHHHHcCcc
Confidence            123568899999999888654

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2e-21  Score=164.58  Aligned_cols=215  Identities=18%  Similarity=0.198  Sum_probs=152.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+......+.. +..... ++.++.+|+++.+++.++++       
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGG-TAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            357999999999999999999999999 99999987643322221 111111 57788999999988776664       


Q ss_pred             CccEEEEcccCCCC-------CCCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 GCKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 ~~d~vih~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                      .+|+|||+|+....       ....+.....+++|+.++.++++++...    +.+++|++||...+.+           
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------  151 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY-----------  151 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC-----------
Confidence            47999999997532       1112334567889999999999988653    3568999999744211           


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                  .+.|+.+|...|.+.+.++++.   ++++++++|+.+.++......  ..........+.+.      
T Consensus       152 ------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~~------  211 (250)
T PRK07774        152 ------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVADMVKGIPL------  211 (250)
T ss_pred             ------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC--CHHHHHHHHhcCCC------
Confidence                        1379999999999999888664   799999999999887643211  11223333333222      


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      .-+.+++|++++++.++....  ..| .|++.+
T Consensus       212 ~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~  244 (250)
T PRK07774        212 SRMGTPEDLVGMCLFLLSDEASWITGQIFNVDG  244 (250)
T ss_pred             CCCcCHHHHHHHHHHHhChhhhCcCCCEEEECC
Confidence            235678999999998887642  245 566654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.89  E-value=1.9e-21  Score=164.80  Aligned_cols=220  Identities=19%  Similarity=0.181  Sum_probs=152.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC-CCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +++++|||||+|+||++++++|++.|+ +|++++|+......+... ..... ++.++.+|+++.++++++++       
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGG-NAQAFACDITDRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999 999998876543332211 11112 68899999999988887765       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+++......    ..+.....+++|+.++.++++++.    +.+.+++|++||..++++.+..          
T Consensus        80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~----------  149 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGE----------  149 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCC----------
Confidence            4799999998643211    122235679999999999888775    4566789999997665433221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCC---ChhHHHHHHHHcCCCCccCcCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                ..|+.+|...+.+.+.++++.   +++++++||+.++++......   .........+....+      .
T Consensus       150 ----------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  213 (250)
T TIGR03206       150 ----------AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP------L  213 (250)
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC------c
Confidence                      379999999999888887663   899999999999988532110   000111122222211      1


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      ..+...+|+|+++..++....  ..| .+.+.+
T Consensus       214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  246 (250)
T TIGR03206       214 GRLGQPDDLPGAILFFSSDDASFITGQVLSVSG  246 (250)
T ss_pred             cCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCC
Confidence            235678999999999887543  245 444443

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=2.8e-21  Score=164.34  Aligned_cols=217  Identities=20%  Similarity=0.216  Sum_probs=151.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-ch-hhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SH-LFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      |++|||||+|+||++++++|+++|+ +|++++|+.... .. ......... ++.++.+|+++++++.++++       .
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGV-EVIFFPADVADLSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            5899999999999999999999999 999998764321 11 111111112 68899999999988776654       5


Q ss_pred             ccEEEEcccCCCCC------CCCCchhhhhHHHHHHHHHHHHHHHhC-----C-----CCEEEEeCccceeccCCCCCCc
Q 020110           81 CKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAKRF-----G-----VRRVVVTSSISAIVPNPGWKGK  144 (331)
Q Consensus        81 ~d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~-----~~~~v~~SS~~~~~~~~~~~~~  144 (331)
                      +|+|||+|+.....      ...+.+...+++|+.++.++++++...     +     .+++|++||..+.++..+.   
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  157 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNR---  157 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCC---
Confidence            79999999875321      122345677999999999998887432     1     4679999997665443221   


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCcc
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (331)
                                       ..|+.+|...|.+++.++.+   ++++++++||+.+.++.....   ..........+ ..  
T Consensus       158 -----------------~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~---~~~~~~~~~~~-~~--  214 (256)
T PRK12745        158 -----------------GEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV---TAKYDALIAKG-LV--  214 (256)
T ss_pred             -----------------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc---chhHHhhhhhc-CC--
Confidence                             37999999999999988754   689999999999998764321   11111111111 11  


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                        ....+.+++|+++++..++....  ..| .|++.++
T Consensus       215 --~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg  250 (256)
T PRK12745        215 --PMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGG  250 (256)
T ss_pred             --CcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCC
Confidence              23457899999999998886542  345 4666543

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.7e-21  Score=167.01  Aligned_cols=215  Identities=20%  Similarity=0.186  Sum_probs=150.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC-------c
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------C   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~   81 (331)
                      +++|+||||+|+||++++++|+++|+ +|++++|+.......       . +++++++|++|++++.+++++       +
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~-------~-~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI-------P-GVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc-------C-CCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999 999999976443221       1 678999999999998887753       6


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+||......    ..++....+++|+.++.++++++    ++.+.+++|++||..++.+.+..            
T Consensus        75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------  142 (270)
T PRK06179         75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYM------------  142 (270)
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCc------------
Confidence            99999999755321    22335778999999999988875    55677899999997554332211            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC---hhHHHHHHHHcCCCCccCcCCCC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN---ASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                              ..|+.+|...+.+.+.++.+   .|+++++++|+.+.++.......   ..... .................
T Consensus       143 --------~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  213 (270)
T PRK06179        143 --------ALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY-DRERAVVSKAVAKAVKK  213 (270)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhh-HHHHHHHHHHHHhcccc
Confidence                    37999999999988877644   59999999999998875432110   00000 00000000000001223


Q ss_pred             ceeHHHHHHHHHHhhcCCCCCceEEE
Q 020110          228 AVPVKDVAKAQVLLFESPAASGRYLC  253 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~~~g~~~~  253 (331)
                      ....+|+|+.++.++..+...-.|..
T Consensus       214 ~~~~~~va~~~~~~~~~~~~~~~~~~  239 (270)
T PRK06179        214 ADAPEVVADTVVKAALGPWPKMRYTA  239 (270)
T ss_pred             CCCHHHHHHHHHHHHcCCCCCeeEec
Confidence            46789999999999876654445654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=2.7e-21  Score=163.85  Aligned_cols=219  Identities=17%  Similarity=0.128  Sum_probs=148.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEE-EecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++++|||||+|+||++++++|+++|+ +|++ ..|+........+.....+.++.++.+|++|++++.++++       .
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46999999999999999999999999 8776 4565433222211111111268899999999998887775       4


Q ss_pred             ccEEEEcccCCCCCCCC----CchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+|+........    +.....+++|+.++.++++++..    .+.++||++||.....+.+..           
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-----------  151 (250)
T PRK08063         83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENY-----------  151 (250)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCc-----------
Confidence            79999999865432211    12244678999999999888864    345699999996443322111           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   .++++++++|+.+.++....... ............      ....++
T Consensus       152 ---------~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~~  215 (250)
T PRK08063        152 ---------TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPN-REELLEDARAKT------PAGRMV  215 (250)
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccC-chHHHHHHhcCC------CCCCCc
Confidence                     37999999999999887754   58999999999998775322111 111111111111      123479


Q ss_pred             eHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          230 PVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      +++|+|+++..++..+.  ..| .+++.+
T Consensus       216 ~~~dva~~~~~~~~~~~~~~~g~~~~~~g  244 (250)
T PRK08063        216 EPEDVANAVLFLCSPEADMIRGQTIIVDG  244 (250)
T ss_pred             CHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            99999999999987643  245 455544

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=2.3e-21  Score=164.29  Aligned_cols=219  Identities=19%  Similarity=0.184  Sum_probs=153.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      .++||||||+|+||++++++|+++|+ +|++++|++.....+...... +.++.++.+|+.|++++.++++       .+
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            46999999999999999999999999 999999987543332221111 1168899999999999887764       46


Q ss_pred             cEEEEcccCCCCCC-----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           82 KGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        82 d~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      |+|||+|+......     ..+.+...+++|+.++..+++.+..    .+.++||++||..++++.+..           
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  151 (251)
T PRK07231         83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGL-----------  151 (251)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCc-----------
Confidence            99999998743321     2233467889999988877776653    566889999998665433221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC-hhHHHHHHHHcCCCCccCcCCCCc
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                               ..|+.+|...+.+.+.++.+   .+++++.++|+.+.++....... ...........+.      ....+
T Consensus       152 ---------~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~  216 (251)
T PRK07231        152 ---------GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATI------PLGRL  216 (251)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCC------CCCCC
Confidence                     37999999999988887754   38999999999997765322110 0001111111211      23457


Q ss_pred             eeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 020110          229 VPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~--~~g~~-~~~~  255 (331)
                      ++++|+|++++.++....  ..|.+ .+.+
T Consensus       217 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~g  246 (251)
T PRK07231        217 GTPEDIANAALFLASDEASWITGVTLVVDG  246 (251)
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence            899999999999986543  34554 4443

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.2e-21  Score=163.22  Aligned_cols=207  Identities=21%  Similarity=0.226  Sum_probs=148.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh-hcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|++...... .++...   .++++.+|+.|.+++.++++       
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPAD---ALRIGGIDLVDPQAARRAVDEVNRQFG   81 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhc---CceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            467999999999999999999999999 999999976543221 111111   56788899999988877665       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+++......    ..+.....++.|+.++.++++++.    +.+.+++|++||...+.+.+.           
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  150 (239)
T PRK12828         82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG-----------  150 (239)
T ss_pred             CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC-----------
Confidence            5799999998654211    122235568899999999888774    456789999999755432211           


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                               ...|+.+|...+.+++.++++   .+++++++||+.++++.......                 ......+
T Consensus       151 ---------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~-----------------~~~~~~~  204 (239)
T PRK12828        151 ---------MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP-----------------DADFSRW  204 (239)
T ss_pred             ---------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC-----------------chhhhcC
Confidence                     137999999998888777643   58999999999999884321100                 0012347


Q ss_pred             eeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 020110          229 VPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~--~~g~-~~~~~  255 (331)
                      ++++|+|+++..++....  ..|. +.+.+
T Consensus       205 ~~~~dva~~~~~~l~~~~~~~~g~~~~~~g  234 (239)
T PRK12828        205 VTPEQIAAVIAFLLSDEAQAITGASIPVDG  234 (239)
T ss_pred             CCHHHHHHHHHHHhCcccccccceEEEecC
Confidence            999999999999997653  2454 45544

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.3e-21  Score=163.17  Aligned_cols=207  Identities=20%  Similarity=0.128  Sum_probs=146.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +++|+||||+|+||++++++|+++|+ +|+++.|+........+..   +.++.++++|++|.+++..+++       ++
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          6 GKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999 9999988754332222111   1167889999999877665543       57


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      |+|||+|+......    ..+.+...+++|+.++.++++++...  ...++|++||..+.++.+..              
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~--------------  147 (249)
T PRK06500         82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNS--------------  147 (249)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCc--------------
Confidence            99999998754321    22345678999999999999998742  23578888886565543221              


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCC---CCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                            ..|+.+|...|.+++.++.+   .+++++++||+.+++|....   ...........+..+.+.      .-+.
T Consensus       148 ------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  215 (249)
T PRK06500        148 ------SVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL------GRFG  215 (249)
T ss_pred             ------cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC------CCCc
Confidence                  37999999999999888754   38999999999999984221   001111222233322221      2246


Q ss_pred             eHHHHHHHHHHhhcCC
Q 020110          230 PVKDVAKAQVLLFESP  245 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~  245 (331)
                      .++|+++++.+++...
T Consensus       216 ~~~~va~~~~~l~~~~  231 (249)
T PRK06500        216 TPEEIAKAVLYLASDE  231 (249)
T ss_pred             CHHHHHHHHHHHcCcc
Confidence            8899999999988653

>PRK06128 oxidoreductase; Provisional

Probab=99.88  E-value=6.2e-21  Score=165.81  Aligned_cols=220  Identities=18%  Similarity=0.180  Sum_probs=153.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++..|+....  ..........+.++.++.+|+++.+++.++++      
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            357999999999999999999999999 998876654321  11111111111267889999999988877764      


Q ss_pred             -CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 -~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                       ++|+|||+|+....     +...+++...+++|+.++.++++++...  .-.++|++||..++.+.++.          
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------  202 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTL----------  202 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCc----------
Confidence             57999999996432     1223456788999999999999998754  23589999997554332221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++++   .|+++++++||.+.++..... ......+..+....      ....+
T Consensus       203 ----------~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~~------p~~r~  265 (300)
T PRK06128        203 ----------LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-GQPPEKIPDFGSET------PMKRP  265 (300)
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-CCCHHHHHHHhcCC------CCCCC
Confidence                      26999999999999988765   589999999999999864321 11112222222221      22356


Q ss_pred             eeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          229 VPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      ...+|+|.++..++....  ..| .+++.+
T Consensus       266 ~~p~dva~~~~~l~s~~~~~~~G~~~~v~g  295 (300)
T PRK06128        266 GQPVEMAPLYVLLASQESSYVTGEVFGVTG  295 (300)
T ss_pred             cCHHHHHHHHHHHhCccccCccCcEEeeCC
Confidence            789999999998876543  245 455554

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.5e-21  Score=164.44  Aligned_cols=205  Identities=19%  Similarity=0.154  Sum_probs=147.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      |++||||||+|+||++++++|+++|+ +|++++|+......... +..... ++.++.+|+.|++++.++++       +
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGG-EALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 99999987644332221 111122 68889999999988877765       5


Q ss_pred             ccEEEEcccCCCCCCCC-----CchhhhhHHHHHHHHHHHHHHHh---CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLEDPV-----DPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+|+........     +.....++.|+.++.++++.+..   .+.+++|++||..++++.++.           
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  147 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTR-----------  147 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCc-----------
Confidence            79999999875542211     22356799999999999998753   234689999997555433221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCc
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGA  228 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  228 (331)
                               ..|+.+|...+.+.+.++.+   .++++++++|+.+.++........         .+.+.. .+....++
T Consensus       148 ---------~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~  209 (263)
T PRK06181        148 ---------SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG---------DGKPLGKSPMQESKI  209 (263)
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc---------cccccccccccccCC
Confidence                     37999999999988776543   589999999999987753221000         111111 12233478


Q ss_pred             eeHHHHHHHHHHhhcC
Q 020110          229 VPVKDVAKAQVLLFES  244 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~  244 (331)
                      ++++|+|+++..++..
T Consensus       210 ~~~~dva~~i~~~~~~  225 (263)
T PRK06181        210 MSAEECAEAILPAIAR  225 (263)
T ss_pred             CCHHHHHHHHHHHhhC
Confidence            9999999999999975

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9.1e-22  Score=167.53  Aligned_cols=209  Identities=15%  Similarity=0.129  Sum_probs=147.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      .|+||||||+|+||++++++|+++|+ +|++++|++.....+.......+.++.++.+|+++.+++.++++       ++
T Consensus         5 ~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          5 GKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            46999999999999999999999999 99999987644333221111111268899999999988876664       57


Q ss_pred             cEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+|+....     ....+++...+++|+.++..+++++...   ..+++|++||.....+.++             
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~-------------  150 (258)
T PRK07890         84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPK-------------  150 (258)
T ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCC-------------
Confidence            999999986432     1223445778999999999999988643   2358999999754332221             


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC--------hhHHHHHHHHcCCCCccC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~  222 (331)
                             ...|+.+|...+.+++.++.+   .+++++++||+.++|+.......        ............      
T Consensus       151 -------~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  217 (258)
T PRK07890        151 -------YGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN------  217 (258)
T ss_pred             -------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc------
Confidence                   137999999999999988754   48999999999999986422100        001111111111      


Q ss_pred             cCCCCceeHHHHHHHHHHhhcC
Q 020110          223 YHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      .....+.+++|++++++.++..
T Consensus       218 ~~~~~~~~~~dva~a~~~l~~~  239 (258)
T PRK07890        218 SDLKRLPTDDEVASAVLFLASD  239 (258)
T ss_pred             CCccccCCHHHHHHHHHHHcCH
Confidence            1123478899999999988874

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.1e-20  Score=160.68  Aligned_cols=229  Identities=18%  Similarity=0.226  Sum_probs=153.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~   80 (331)
                      +++|+||||+|+||++++++|.++|+ +|++++|++.....+...      +++++.+|++|.+++.++++        .
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~------~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAE------GLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHC------CceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 999999986554444332      67889999999988776654        4


Q ss_pred             ccEEEEcccCCCCCCC----CCchhhhhHHHHHH----HHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLEDP----VDPEKELILPAVQG----TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+||.......    .+.....+++|+.+    +..+++.+++.+.+++|++||..+..+.+.            
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~------------  144 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKY------------  144 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCc------------
Confidence            6999999987654221    12335678999998    555666667777789999999644322111            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHH---HHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCC----------
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD----------  219 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~----------  219 (331)
                              ...|+.+|...+.+.+.++   +.+|+++++++||.+-.+........    +.+.......          
T Consensus       145 --------~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  212 (277)
T PRK05993        145 --------RGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAA----FKRWIDIENSVHRAAYQQQM  212 (277)
T ss_pred             --------cchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHH----HhhhhccccchhHHHHHHHH
Confidence                    1379999999999988765   34689999999999977643211000    0000000000          


Q ss_pred             ---c-cCcCCCCceeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCC
Q 020110          220 ---T-QEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFP  272 (331)
Q Consensus       220 ---~-~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~  272 (331)
                         . ........+..+++|+.++.++.+......|..+. .   ..+...+.+.+|
T Consensus       213 ~~~~~~~~~~~~~~~~~~va~~i~~a~~~~~~~~~~~~~~-~---~~~~~~~~~~~p  265 (277)
T PRK05993        213 ARLEGGGSKSRFKLGPEAVYAVLLHALTAPRPRPHYRVTT-P---AKQGALLKRLLP  265 (277)
T ss_pred             HHHHhhhhccccCCCHHHHHHHHHHHHcCCCCCCeeeeCc-h---hHHHHHHHHHCC
Confidence               0 00011123678999999999998775544454332 1   234444555553

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.6e-21  Score=163.21  Aligned_cols=227  Identities=18%  Similarity=0.154  Sum_probs=155.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +.+++|||||+|+||++++++|+++|+ +|++++|+.........+..... ++.++.+|+++++++.++++       .
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQP-RAEFVQVDLTDDAQCRDAVEQTVAKFGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            357999999999999999999999999 99999887654422222211122 68899999999998887775       4


Q ss_pred             ccEEEEcccCCCCC---CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           81 CKGVFHVASPCTLE---DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        81 ~d~vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +|+|||+||.....   ...++....+++|+.++.++.+++...   +.++||++||..++++.+..             
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~-------------  150 (258)
T PRK08628         84 IDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGT-------------  150 (258)
T ss_pred             CCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCC-------------
Confidence            79999999964321   112345677899999999988877532   34689999997665433221             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC---hhHHHHHHHHcCCCCccCcCCCCc
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN---ASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                             ..|+.+|...+.+++.++.+   .+++++.++|+.++++.......   ........+...  .+.   ...+
T Consensus       151 -------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~  218 (258)
T PRK08628        151 -------SGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK--IPL---GHRM  218 (258)
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc--CCc---cccC
Confidence                   37999999999999988753   58999999999999985321100   000111111111  111   1246


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCc-eEEEeccccCHH
Q 020110          229 VPVKDVAKAQVLLFESP--AASG-RYLCTNGIYQFG  261 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~~~s~~  261 (331)
                      +.++|+|+++.+++...  ...| .+.+.+....++
T Consensus       219 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~  254 (258)
T PRK08628        219 TTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLD  254 (258)
T ss_pred             CCHHHHHHHHHHHhChhhccccCceEEecCCccccc
Confidence            88999999999988764  2345 344544433333

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=8.7e-21  Score=159.63  Aligned_cols=200  Identities=17%  Similarity=0.123  Sum_probs=146.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +.++++||||+|+||++++++|+++|+ +|++++|++....... ++..... ++.++.+|+++++++.++++       
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGV-KVVIATADVSDYEEVTAAIEQLKNELG   83 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCC-eEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999 9999999764432221 1111112 68889999999998887775       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+++......    ..++....+++|+.++.++.+++.    +.+.+++|++||...+++.+..          
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~----------  153 (239)
T PRK07666         84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVT----------  153 (239)
T ss_pred             CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCC----------
Confidence            6899999998754321    122346778999999999988775    3456789999997665543321          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++.+   .+++++++||+.+.++.....         ....+       ....+
T Consensus       154 ----------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---------~~~~~-------~~~~~  207 (239)
T PRK07666        154 ----------SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL---------GLTDG-------NPDKV  207 (239)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc---------ccccc-------CCCCC
Confidence                      37999999999888877644   589999999999988753211         00001       12345


Q ss_pred             eeHHHHHHHHHHhhcCC
Q 020110          229 VPVKDVAKAQVLLFESP  245 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~  245 (331)
                      +..+|+|+++..++...
T Consensus       208 ~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        208 MQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             CCHHHHHHHHHHHHhCC
Confidence            78999999999999765

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.88  E-value=1.2e-20  Score=160.05  Aligned_cols=202  Identities=18%  Similarity=0.134  Sum_probs=146.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------   80 (331)
                      +.|++|||||+|+||++++++|+++|+ +|+++.|+.     ....   .. ++.++++|+.+++++.+++++       
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQE---DY-PFATFVLDVSDAAAVAQVCQRLLAETGP   76 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhc---CC-ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 999998876     1111   11 688899999999988887753       


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+++......    ..+++...+++|+.++.++++++..    .+.+++|++||.....+..+            
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~------------  144 (252)
T PRK08220         77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIG------------  144 (252)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCC------------
Confidence            799999999754321    2234577899999999999988743    34568999998744322211            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChh---HH----HHHHHHcCCCCccC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS---CA----VLQQLLQGSKDTQE  222 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~---~~----~~~~~~~~~~~~~~  222 (331)
                              ...|+.+|...+.+.+.++++   +++++++++|+.++++.........   ..    .......+      
T Consensus       145 --------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------  210 (252)
T PRK08220        145 --------MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLG------  210 (252)
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhc------
Confidence                    137999999999999888765   6899999999999998642110000   00    01111111      


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCC
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      .....+++++|+|++++.++...
T Consensus       211 ~~~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        211 IPLGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             CCCcccCCHHHHHHHHHHHhcch
Confidence            12356899999999999988653

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.3e-21  Score=160.53  Aligned_cols=214  Identities=23%  Similarity=0.246  Sum_probs=151.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +.|+++||||+|+||++++++|+++|+ +|+++.|++........ +..... ++.++.+|+++++++.++++       
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGG-RAHAIAADLADPASVQRFFDAAAAALG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999 99999887654332221 111112 68899999999998887764       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+++......    ..+.....++.|+.++.++++++...    +..++|++||.....+.+..          
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  153 (250)
T PRK12939         84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKL----------  153 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCc----------
Confidence            5899999998754311    12234566889999999999887543    34589999997554332221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+++.++.+   .+++++.++|+.+.++.......  ..+......+.      ....+
T Consensus       154 ----------~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~------~~~~~  215 (250)
T PRK12939        154 ----------GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--DERHAYYLKGR------ALERL  215 (250)
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--hHHHHHHHhcC------CCCCC
Confidence                      36999999999999887644   47999999999998776432111  01122222221      23567


Q ss_pred             eeHHHHHHHHHHhhcCCC--CCceE
Q 020110          229 VPVKDVAKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~--~~g~~  251 (331)
                      ++++|+|+++..++....  ..|.+
T Consensus       216 ~~~~dva~~~~~l~~~~~~~~~G~~  240 (250)
T PRK12939        216 QVPDDVAGAVLFLLSDAARFVTGQL  240 (250)
T ss_pred             CCHHHHHHHHHHHhCccccCccCcE
Confidence            999999999999987542  34543

>PLN02253 xanthoxin dehydrogenase

Probab=99.87  E-value=1.4e-20  Score=162.16  Aligned_cols=222  Identities=19%  Similarity=0.166  Sum_probs=151.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|++|||||+|+||++++++|++.|+ +|++++|+............... ++.++++|++|.+++.++++       +
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEP-NVCFFHCDVTVEDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCC-ceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999 99999886543332222111112 68899999999998887775       5


Q ss_pred             ccEEEEcccCCCCC------CCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           81 CKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        81 ~d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      +|+|||+||.....      ...+++...+++|+.++.++++++...    +..++|++||..+.++.+..         
T Consensus        95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~---------  165 (280)
T PLN02253         95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP---------  165 (280)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCC---------
Confidence            89999999875321      122345778999999999998877532    34579999987665443221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCC---ChhHHHHH---HHHcCCCCcc
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---NASCAVLQ---QLLQGSKDTQ  221 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~---~~~~~~~~~~  221 (331)
                                 ..|+.+|...|.+.+.++.+.   ++++.+++|+.+.++......   ......+.   ...... .. 
T Consensus       166 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-  232 (280)
T PLN02253        166 -----------HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKN-AN-  232 (280)
T ss_pred             -----------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcC-CC-
Confidence                       279999999999999887654   799999999999887432110   00001111   111100 00 


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                        .....++++|+|+++++++....  ..| .+.+.+
T Consensus       233 --l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
T PLN02253        233 --LKGVELTVDDVANAVLFLASDEARYISGLNLMIDG  267 (280)
T ss_pred             --CcCCCCCHHHHHHHHHhhcCcccccccCcEEEECC
Confidence              01234789999999999886532  245 344443

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.87  E-value=6.8e-21  Score=162.02  Aligned_cols=196  Identities=18%  Similarity=0.122  Sum_probs=144.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC-------c
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------C   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~   81 (331)
                      +|+||||||+|+||++++++|+++|+ +|++++|+........+.....+ ++.++.+|++|++++.+++++       +
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            46999999999999999999999999 99999987654333322211122 688999999999888776643       7


Q ss_pred             cEEEEcccCCCCCC-----CCCchhhhhHHHHHHHHHHHH----HHHhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           82 KGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        82 d~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      |++||+||......     ..+.....+++|+.++.++++    .+++.+.+++|++||..++++.+..           
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~-----------  148 (257)
T PRK07024         80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGA-----------  148 (257)
T ss_pred             CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCC-----------
Confidence            99999998754211     123356789999999999777    4455566789999997665543321           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHH---HHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++   +.++++++++||+.+.++.....             ..      ....++
T Consensus       149 ---------~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------~~------~~~~~~  200 (257)
T PRK07024        149 ---------GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-------------PY------PMPFLM  200 (257)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-------------CC------CCCCcc
Confidence                     379999999999988776   34589999999999988743210             00      001236


Q ss_pred             eHHHHHHHHHHhhcCC
Q 020110          230 PVKDVAKAQVLLFESP  245 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~  245 (331)
                      ..+|+++.++.++.+.
T Consensus       201 ~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        201 DADRFAARAARAIARG  216 (257)
T ss_pred             CHHHHHHHHHHHHhCC
Confidence            7999999999999754

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.87  E-value=1.1e-20  Score=160.85  Aligned_cols=224  Identities=15%  Similarity=0.119  Sum_probs=150.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCC-CCCcEEEEEccCCCchHHHHHhc-------C
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      |+||||||+|+||++++++|++.|+ +|++++|+......... +... ...++.++.+|+++.+++.++++       .
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999 99999987644332221 1100 11168899999999988776664       4


Q ss_pred             ccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHHHh----CC-CCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|+|||+|+.......    .++....+++|+.++.++++++..    .+ -.++|++||..+.++.+..          
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~----------  151 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHN----------  151 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCC----------
Confidence            7999999986553221    223456679999998887776643    34 3589999986544432221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCC--C---ccCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK--D---TQEY  223 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~--~---~~~~  223 (331)
                                ..|+.+|...+.+.+.++.   .+|+++.++|||.++++....  ..+..+.........  .   ..+.
T Consensus       152 ----------~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  219 (259)
T PRK12384        152 ----------SGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--SLLPQYAKKLGIKPDEVEQYYIDKV  219 (259)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh--hhhHHHHHhcCCChHHHHHHHHHhC
Confidence                      3799999999988888774   478999999999988764322  111111111000000  0   0112


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ....+++++|+++++..++....  ..| .|+++++
T Consensus       220 ~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g  255 (259)
T PRK12384        220 PLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG  255 (259)
T ss_pred             cccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence            35678999999999998876543  245 5666554

>PRK05717 oxidoreductase; Validated

Probab=99.87  E-value=1.2e-20  Score=160.24  Aligned_cols=208  Identities=16%  Similarity=0.104  Sum_probs=146.9

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ..++|+++||||+|+||++++++|+++|+ +|++++|+........+..  .. ++.++.+|+++.+++.++++      
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~--~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKAL--GE-NAWFIAMDVADEAQVAAGVAEVLGQF   82 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHc--CC-ceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            34568999999999999999999999999 9999887654332222111  11 68889999999988765543      


Q ss_pred             -CccEEEEcccCCCCC------CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 -GCKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 -~~d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                       .+|+|||+|+.....      ...+++...+++|+.++.++++++...   ...++|++||....++.++.        
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~--------  154 (255)
T PRK05717         83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDT--------  154 (255)
T ss_pred             CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCC--------
Confidence             379999999975421      122334678999999999999998632   23689999997655433221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                  ..|+.+|...+.+.+.++.+.  ++++++++|+.+.++......  . .......... .    ....
T Consensus       155 ------------~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~--~-~~~~~~~~~~-~----~~~~  214 (255)
T PRK05717        155 ------------EAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRR--A-EPLSEADHAQ-H----PAGR  214 (255)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccccc--c-hHHHHHHhhc-C----CCCC
Confidence                        379999999999999988775  589999999999997532211  0 0111111110 1    1234


Q ss_pred             ceeHHHHHHHHHHhhcCC
Q 020110          228 AVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~  245 (331)
                      +.+++|++.++..++...
T Consensus       215 ~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        215 VGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             CcCHHHHHHHHHHHcCch
Confidence            678999999998888643

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.87  E-value=6.1e-21  Score=160.77  Aligned_cols=204  Identities=17%  Similarity=0.155  Sum_probs=145.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+||++|||||+|+||+.++++|+++|+ +|++++|++.....+.......+.++.++.+|+++++++.++++       
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999 99999997654333222111111178899999999998877765       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+|+......    ..++....+++|+.++.++++++    ++.+.+++|++||...+.+.++           
T Consensus        83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----------  151 (241)
T PRK07454         83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ-----------  151 (241)
T ss_pred             CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC-----------
Confidence            4799999998754321    12334667889999988877765    3445678999999754332211           


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                               ...|+.+|...+.+.+.+++   ..+++++++||+.+-++......  .             ........+
T Consensus       152 ---------~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~--~-------------~~~~~~~~~  207 (241)
T PRK07454        152 ---------WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET--V-------------QADFDRSAM  207 (241)
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc--c-------------ccccccccC
Confidence                     13799999999988877663   34899999999999877532110  0             000011235


Q ss_pred             eeHHHHHHHHHHhhcCCC
Q 020110          229 VPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~  246 (331)
                      +..+|+|++++.++..+.
T Consensus       208 ~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        208 LSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             CCHHHHHHHHHHHHcCCc
Confidence            789999999999998763

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.87  E-value=2.6e-20  Score=157.51  Aligned_cols=216  Identities=20%  Similarity=0.205  Sum_probs=149.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chh-hcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +|+||||||||+||++++++|++.|+ +|+++.|+.... ... ..+..... ++.++.+|+++.+++.++++       
T Consensus         5 ~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          5 GKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGG-KALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46999999999999999999999999 998887765421 111 11111112 78889999999998877664       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+|+......    ..+.....++.|+.++.++++++...    +.+++|++||....++.+..          
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~----------  152 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQ----------  152 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCC----------
Confidence            5799999998755321    12234567889999999998887643    55789999997665543321          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+++.++++   .++++++++|+.+.++.....   ............      ....+
T Consensus       153 ----------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~---~~~~~~~~~~~~------~~~~~  213 (248)
T PRK05557        153 ----------ANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL---PEDVKEAILAQI------PLGRL  213 (248)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc---ChHHHHHHHhcC------CCCCC
Confidence                      37999999999888777643   489999999998866543221   112222222221      12346


Q ss_pred             eeHHHHHHHHHHhhcC--CCCCc-eEEEec
Q 020110          229 VPVKDVAKAQVLLFES--PAASG-RYLCTN  255 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~--~~~~g-~~~~~~  255 (331)
                      .+++|+++++..++..  ....| .+++.+
T Consensus       214 ~~~~~va~~~~~l~~~~~~~~~g~~~~i~~  243 (248)
T PRK05557        214 GQPEEIASAVAFLASDEAAYITGQTLHVNG  243 (248)
T ss_pred             cCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence            7999999999888765  23345 455543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.87  E-value=2.6e-20  Score=149.53  Aligned_cols=211  Identities=19%  Similarity=0.177  Sum_probs=158.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|.++|||||+.||.++++.|.++|+ .|++..|+......+...... + .+.....|++|.+++.++++       
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~-~-~~~~~~~DVtD~~~~~~~i~~~~~~~g   80 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGA-G-AALALALDVTDRAAVEAAIEALPEEFG   80 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhcc-C-ceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence            3457899999999999999999999999 999999988765555543332 2 68899999999988666654       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|++||+||....+    ...++++.++++|+.|..+..++.    .+.+...+|++||..+.+..++.          
T Consensus        81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~----------  150 (246)
T COG4221          81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGG----------  150 (246)
T ss_pred             cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCC----------
Confidence            589999999977652    234567899999999999988876    34455689999999887766653          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCC-ChhHHHHHHHHcCCCCccCcCCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                +.|+.+|.....+......+   .+++++.+-||.+-+.....-. .-......+...         ...
T Consensus       151 ----------~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~---------~~~  211 (246)
T COG4221         151 ----------AVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK---------GGT  211 (246)
T ss_pred             ----------ccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc---------cCC
Confidence                      47999999998888776544   4899999999988554321100 001112222222         345


Q ss_pred             ceeHHHHHHHHHHhhcCCCCCc
Q 020110          228 AVPVKDVAKAQVLLFESPAASG  249 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~~~g  249 (331)
                      .+..+|+|+++.+++..+..-.
T Consensus       212 ~l~p~dIA~~V~~~~~~P~~vn  233 (246)
T COG4221         212 ALTPEDIAEAVLFAATQPQHVN  233 (246)
T ss_pred             CCCHHHHHHHHHHHHhCCCccc
Confidence            7899999999999999887544

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.5e-21  Score=162.63  Aligned_cols=212  Identities=21%  Similarity=0.210  Sum_probs=141.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-CccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~vih~   87 (331)
                      +++||||||+|+||++++++|++.|+ +|+++.|+......+.......+.++.++.+|++|++++.+++. ++|+|||+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            46899999999999999999999999 99999987644333222111111268899999999999988886 79999999


Q ss_pred             ccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhc
Q 020110           88 ASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (331)
Q Consensus        88 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (331)
                      |+......    ..+.....+++|+.++.++.+++    ++.+.+++|++||..+..+.+.                   
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~-------------------  141 (257)
T PRK09291         81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPF-------------------  141 (257)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCC-------------------
Confidence            98754321    12223557888988877666543    4556689999999754332211                   


Q ss_pred             cCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCC-C-Cc--cCcCCCCceeHH
Q 020110          160 RKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-K-DT--QEYHWLGAVPVK  232 (331)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~-~~--~~~~~~~~v~v~  232 (331)
                       ...|+.+|...|.+.+.++.+   .|++++++||+.+..+.......    ......... . +.  ......+++..+
T Consensus       142 -~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (257)
T PRK09291        142 -TGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAE----TPKRWYDPARNFTDPEDLAFPLEQFDPQ  216 (257)
T ss_pred             -cchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhh----hhhhhcchhhHHHhhhhhhccccCCCHH
Confidence             137999999999888776543   68999999999875432211000    000000000 0 00  011233457888


Q ss_pred             HHHHHHHHhhcCC
Q 020110          233 DVAKAQVLLFESP  245 (331)
Q Consensus       233 D~a~a~~~~l~~~  245 (331)
                      |+++.+..++..+
T Consensus       217 ~~~~~~~~~l~~~  229 (257)
T PRK09291        217 EMIDAMVEVIPAD  229 (257)
T ss_pred             HHHHHHHHHhcCC
Confidence            8888888777654

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.2e-20  Score=157.44  Aligned_cols=206  Identities=23%  Similarity=0.231  Sum_probs=142.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---CccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi   85 (331)
                      ||++|||||+|+||+++++.|+++ + +|++++|+......+....   . +++++++|++|++++.++++   ++|+||
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~id~vi   76 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAEL---P-GATPFPVDLTDPEAIAAAVEQLGRLDVLV   76 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHh---c-cceEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            579999999999999999999999 8 9999999765433332211   1 57889999999999988886   589999


Q ss_pred             EcccCCCCCCC----CCchhhhhHHHHHHHHHHHH----HHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhh
Q 020110           86 HVASPCTLEDP----VDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (331)
Q Consensus        86 h~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (331)
                      |+++.......    .+.....++.|+.+..++.+    ++++. .+++|++||..++.+.++.                
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~----------------  139 (227)
T PRK08219         77 HNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGW----------------  139 (227)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCC----------------
Confidence            99987543211    12234557888888555444    44444 4689999987554332211                


Q ss_pred             hccCcchhHHHHHHHHHHHHHHHH-cC-CeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHH
Q 020110          158 KSRKKWYPVSKTLAEKAAWEFAEK-HG-VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA  235 (331)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~-~~-~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  235 (331)
                          ..|+.+|...+.+.+.++.+ .+ +++..++|+.+.++....       .. . ..+..  .  ....+++++|++
T Consensus       140 ----~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~-------~~-~-~~~~~--~--~~~~~~~~~dva  202 (227)
T PRK08219        140 ----GSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRG-------LV-A-QEGGE--Y--DPERYLRPETVA  202 (227)
T ss_pred             ----chHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhh-------hh-h-hhccc--c--CCCCCCCHHHHH
Confidence                37999999999888877644 34 899999998776553211       00 0 01111  1  235689999999


Q ss_pred             HHHHHhhcCCCCCceEEEe
Q 020110          236 KAQVLLFESPAASGRYLCT  254 (331)
Q Consensus       236 ~a~~~~l~~~~~~g~~~~~  254 (331)
                      ++++.+++.+....+|++.
T Consensus       203 ~~~~~~l~~~~~~~~~~~~  221 (227)
T PRK08219        203 KAVRFAVDAPPDAHITEVV  221 (227)
T ss_pred             HHHHHHHcCCCCCccceEE
Confidence            9999999876544456543

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=1.6e-20  Score=159.42  Aligned_cols=219  Identities=16%  Similarity=0.106  Sum_probs=152.3

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      +....+|++|||||+|+||++++++|+++|+ +|++.+|+......... +..... ++..+.+|++|++++.++++   
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~   81 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGI-KAHAAPFNVTHKQEVEAAIEHIE   81 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCC-eEEEEecCCCCHHHHHHHHHHHH
Confidence            3334567999999999999999999999999 99999987644333221 111112 67788999999988887664   


Q ss_pred             ----CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                          .+|+|||+|+.....    ...+++...+++|+.++..+++++..    .+.+++|++||.....+.+..      
T Consensus        82 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------  155 (254)
T PRK08085         82 KDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTI------  155 (254)
T ss_pred             HhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCC------
Confidence                379999999865321    22334567899999999888887654    345789999987543322211      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                    ..|+.+|...+.+.+.++.+   +|+++++++||.+.++....... ............      .
T Consensus       156 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~~~~~~~~~~~~------p  214 (254)
T PRK08085        156 --------------TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-DEAFTAWLCKRT------P  214 (254)
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-CHHHHHHHHhcC------C
Confidence                          37999999999999988755   48999999999999886432111 111111111111      1


Q ss_pred             CCCceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          225 WLGAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      ...+...+|++.++..++...  ...|..
T Consensus       215 ~~~~~~~~~va~~~~~l~~~~~~~i~G~~  243 (254)
T PRK08085        215 AARWGDPQELIGAAVFLSSKASDFVNGHL  243 (254)
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCcCCE
Confidence            234678999999998888743  335543

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.5e-20  Score=160.42  Aligned_cols=223  Identities=20%  Similarity=0.140  Sum_probs=151.4

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      |+.|+..+.+++|||||+|+||++++++|++.|+ +|++++|+........ .+..... ++.++.+|+++++++.++++
T Consensus         1 ~~~~~~~~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~i~~~~~   78 (264)
T PRK07576          1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGP-EGLGVSADVRDYAAVEAAFA   78 (264)
T ss_pred             CCccccCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCC-ceEEEECCCCCHHHHHHHHH
Confidence            6777766678999999999999999999999999 9999998765432221 1111112 67788999999988877764


Q ss_pred             -------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCcc
Q 020110           80 -------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        80 -------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                             .+|+|||+|+.....    ...++....+++|+.++.++++++...   .-+++|++||.....+.++.    
T Consensus        79 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~----  154 (264)
T PRK07576         79 QIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQ----  154 (264)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCc----
Confidence                   369999999754321    122334567889999999999887542   12589999997543322221    


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccC
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (331)
                                      ..|+.+|...+.+++.++.+   .+++++.++|+.+.+....................  .   
T Consensus       155 ----------------~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~--~---  213 (264)
T PRK07576        155 ----------------AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQS--V---  213 (264)
T ss_pred             ----------------cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhc--C---
Confidence                            37999999999999887654   47999999999887532111000000111111111  1   


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCCC--CCceE
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~  251 (331)
                       ....+...+|+|++++.++....  ..|.+
T Consensus       214 -~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  243 (264)
T PRK07576        214 -PLKRNGTKQDIANAALFLASDMASYITGVV  243 (264)
T ss_pred             -CCCCCCCHHHHHHHHHHHcChhhcCccCCE
Confidence             12346789999999999997532  35644

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.8e-20  Score=158.36  Aligned_cols=219  Identities=17%  Similarity=0.142  Sum_probs=148.8

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC-ccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc--
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   79 (331)
                      |+...+|++|||||+|+||++++++|++.|+ +|+++.++.. ....+. ....... ++.++.+|++|.+++.++++  
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~   81 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGR-RAVALQADLADEAEVRALVARA   81 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHH
Confidence            3344567999999999999999999999999 8888766432 211111 1111112 68889999999988887764  


Q ss_pred             -----CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccc
Q 020110           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 -----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                           .+|+|||+|+.....    ...+.....+++|+.++.++++++...    +-+++|++||.....+.+.      
T Consensus        82 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~------  155 (258)
T PRK09134         82 SAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPD------  155 (258)
T ss_pred             HHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCC------
Confidence                 379999999865431    122345778999999999999987653    2357888877532211111      


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                    ...|+.+|...|.+.+.++++.  +++++.++||.++......    . ..........+      
T Consensus       156 --------------~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~----~-~~~~~~~~~~~------  210 (258)
T PRK09134        156 --------------FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS----P-EDFARQHAATP------  210 (258)
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC----h-HHHHHHHhcCC------
Confidence                          1269999999999999987654  4899999999887653211    1 11112222111      


Q ss_pred             CCCceeHHHHHHHHHHhhcCCCCCc-eEEEec
Q 020110          225 WLGAVPVKDVAKAQVLLFESPAASG-RYLCTN  255 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~~~~g-~~~~~~  255 (331)
                      .....+++|+|++++.++..+...| .+.+.+
T Consensus       211 ~~~~~~~~d~a~~~~~~~~~~~~~g~~~~i~g  242 (258)
T PRK09134        211 LGRGSTPEEIAAAVRYLLDAPSVTGQMIAVDG  242 (258)
T ss_pred             CCCCcCHHHHHHHHHHHhcCCCcCCCEEEECC
Confidence            1234779999999999998776667 445544

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.8e-20  Score=159.27  Aligned_cols=219  Identities=15%  Similarity=0.117  Sum_probs=153.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|++|||||+|+||.+++++|+++|+ +|+++.|+... ...........+.++.++.+|+++.+++.++++       
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999 99998886532 111111111111268889999999988877664       


Q ss_pred             CccEEEEcccCCCCC-----CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      ++|+|||+|+.....     ...+.....+++|+.++.++++++...  ...++|++||..++.+.+..           
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~-----------  192 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETL-----------  192 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCc-----------
Confidence            479999999875321     112234678999999999999988653  23589999997554433221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+.   |++++.++|+.++++......  ....+......      .....+.
T Consensus       193 ---------~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~--~~~~~~~~~~~------~~~~~~~  255 (290)
T PRK06701        193 ---------IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF--DEEKVSQFGSN------TPMQRPG  255 (290)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc--CHHHHHHHHhc------CCcCCCc
Confidence                     269999999999999888664   899999999999988543211  11112222111      1235688


Q ss_pred             eHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          230 PVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      +++|+|+++++++....  ..| .+.+.+
T Consensus       256 ~~~dva~~~~~ll~~~~~~~~G~~i~idg  284 (290)
T PRK06701        256 QPEELAPAYVFLASPDSSYITGQMLHVNG  284 (290)
T ss_pred             CHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence            99999999999887643  345 345544

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.8e-20  Score=157.69  Aligned_cols=193  Identities=20%  Similarity=0.179  Sum_probs=144.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC----ccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG----CKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~d~v   84 (331)
                      |++++||||+|+||++++++|+++|+ +|++++|++.....+...   .. ++.++.+|+++++++.+++++    .|.+
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~d~~   75 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ---SA-NIFTLAFDVTDHPGTKAALSQLPFIPELW   75 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh---cC-CCeEEEeeCCCHHHHHHHHHhcccCCCEE
Confidence            57899999999999999999999999 999999976543333221   11 678899999999999988865    5899


Q ss_pred             EEcccCCCC-C---CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           85 FHVASPCTL-E---DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        85 ih~a~~~~~-~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      ||+|+.... .   ...+.....+++|+.++.++++++...  +.+++|++||....++.++.                 
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----------------  138 (240)
T PRK06101         76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRA-----------------  138 (240)
T ss_pred             EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCC-----------------
Confidence            999985432 1   112223568999999999999988753  33579999987554433221                 


Q ss_pred             ccCcchhHHHHHHHHHHHHHH---HHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHH
Q 020110          159 SRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA  235 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~---~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  235 (331)
                         ..|+.+|...+.+.+.++   +..|++++++||+.++++......               .    .....+..+|++
T Consensus       139 ---~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~---------------~----~~~~~~~~~~~a  196 (240)
T PRK06101        139 ---EAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT---------------F----AMPMIITVEQAS  196 (240)
T ss_pred             ---chhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC---------------C----CCCcccCHHHHH
Confidence               379999999999988776   346899999999999987533210               0    011247899999


Q ss_pred             HHHHHhhcCC
Q 020110          236 KAQVLLFESP  245 (331)
Q Consensus       236 ~a~~~~l~~~  245 (331)
                      +.+...++..
T Consensus       197 ~~i~~~i~~~  206 (240)
T PRK06101        197 QEIRAQLARG  206 (240)
T ss_pred             HHHHHHHhcC
Confidence            9999998864

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=2.5e-20  Score=158.50  Aligned_cols=222  Identities=19%  Similarity=0.146  Sum_probs=154.4

Q ss_pred             CCccc--ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHH
Q 020110            1 MASEA--EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRA   77 (331)
Q Consensus         1 m~~~~--~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~   77 (331)
                      |+.+.  ..++|+|+||||+|+||++++++|+++|+ +|+++.|+......+.. +..... ++.++.+|+++++++.++
T Consensus         1 ~~~~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~   78 (256)
T PRK06124          1 MSILQRFSLAGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGG-AAEALAFDIADEEAVAAA   78 (256)
T ss_pred             CCcccccCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHH
Confidence            44444  23468999999999999999999999999 99999997643322221 111122 688999999999888777


Q ss_pred             hc-------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCC
Q 020110           78 VE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWK  142 (331)
Q Consensus        78 ~~-------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~  142 (331)
                      ++       .+|+|||+++.....    ...++....+++|+.++.++.+++..    .+.+++|++||..+..+.++. 
T Consensus        79 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~-  157 (256)
T PRK06124         79 FARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGD-  157 (256)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCc-
Confidence            65       369999999975432    12233466799999999999876643    466789999997554433221 


Q ss_pred             CccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCC
Q 020110          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (331)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (331)
                                         ..|+.+|...+.+.+.++.+   .+++++.++|+.+.++....... .......+....  
T Consensus       158 -------------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~--  215 (256)
T PRK06124        158 -------------------AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAA-DPAVGPWLAQRT--  215 (256)
T ss_pred             -------------------cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhcc-ChHHHHHHHhcC--
Confidence                               37999999999888877654   47999999999999986322111 111111121111  


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCCC--CCceE
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~  251 (331)
                          ....+++++|++.+++.++....  ..|.+
T Consensus       216 ----~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~  245 (256)
T PRK06124        216 ----PLGRWGRPEEIAGAAVFLASPAASYVNGHV  245 (256)
T ss_pred             ----CCCCCCCHHHHHHHHHHHcCcccCCcCCCE
Confidence                12347899999999999997653  34654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.87  E-value=1.7e-20  Score=164.79  Aligned_cols=190  Identities=15%  Similarity=0.072  Sum_probs=129.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|+|+||||+|+||.+++++|++.|+ +|+++.|+..............+.++.++.+|+++.+++.++++       .
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            467999999999999999999999999 99999987654332222111111268899999999998887775       3


Q ss_pred             ccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHh----CC--CCEEEEeCccceeccCCC-CC--Cccc
Q 020110           81 CKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FG--VRRVVVTSSISAIVPNPG-WK--GKVF  146 (331)
Q Consensus        81 ~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~~SS~~~~~~~~~-~~--~~~~  146 (331)
                      +|+|||+||....     ....+.++..+++|+.++.++++++..    .+  ..++|++||....+.... ..  ..+.
T Consensus        84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~  163 (322)
T PRK07453         84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA  163 (322)
T ss_pred             ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence            8999999996532     112234577899999999999887754    22  358999999755432111 00  0000


Q ss_pred             cCCCC-------CCh-----hhhhccCcchhHHHHHHHHHHHHHHHHc----CCeEEEEcCCcccCCC
Q 020110          147 DETSW-------TDL-----EYCKSRKKWYPVSKTLAEKAAWEFAEKH----GVDVVAIHPATCLGPL  198 (331)
Q Consensus       147 ~E~~~-------~~~-----~~~~~~~~~y~~sK~~~e~~~~~~~~~~----~~~~~~lR~~~v~G~~  198 (331)
                      +.++.       ..|     .....+...|+.||+..+.+.+.+++++    |++++++|||+|++..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence            10000       000     0001123479999999988888877654    7999999999998644

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.87  E-value=3.9e-20  Score=156.58  Aligned_cols=215  Identities=18%  Similarity=0.117  Sum_probs=149.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|+||||||+|+||++++++|+++|+ +|+++.|+... ........... ++.++.+|+++.+++.++++       +
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~-~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPS-ETQQQVEALGR-RFLSLTADLSDIEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHH-HHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999 99999886521 11111111112 68899999999988876654       4


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CC-CCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|++||+|+......    ..+.+...+++|+.++.++++++..    .+ .+++|++||...+.+.+..          
T Consensus        81 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----------  150 (248)
T TIGR01832        81 IDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRV----------  150 (248)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCC----------
Confidence            899999999764321    1233466789999999999988753    23 4689999997544322211          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++++.   ++++++++||.+..+....... ...........  .    ....+
T Consensus       151 ----------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~--~----~~~~~  213 (248)
T TIGR01832       151 ----------PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA-DEDRNAAILER--I----PAGRW  213 (248)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc-ChHHHHHHHhc--C----CCCCC
Confidence                      269999999999999988764   8999999999998875322111 00111111111  1    13468


Q ss_pred             eeHHHHHHHHHHhhcCCC--CCceEE
Q 020110          229 VPVKDVAKAQVLLFESPA--ASGRYL  252 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~--~~g~~~  252 (331)
                      +..+|+|++++.++....  ..|.++
T Consensus       214 ~~~~dva~~~~~l~s~~~~~~~G~~i  239 (248)
T TIGR01832       214 GTPDDIGGPAVFLASSASDYVNGYTL  239 (248)
T ss_pred             cCHHHHHHHHHHHcCccccCcCCcEE
Confidence            999999999999987543  346553

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.86  E-value=2.7e-20  Score=157.48  Aligned_cols=204  Identities=18%  Similarity=0.182  Sum_probs=143.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Ccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   82 (331)
                      |+|+||||+|+||.++++.|+++|+ +|++++|++.....+.....  . ++.++.+|+++.+++.++++       ++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   76 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELG--D-NLYIAQLDVRNRAAIEEMLASLPAEWRNID   76 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhc--c-ceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999 99999997654433322111  1 68889999999988877664       589


Q ss_pred             EEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           83 GVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        83 ~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      +|||+||....     ....++....+++|+.++..+++++    ++.+.+++|++||.....+..+             
T Consensus        77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------  143 (248)
T PRK10538         77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG-------------  143 (248)
T ss_pred             EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCC-------------
Confidence            99999986421     1123344677899999976666654    4556779999999754322211             


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCC-CChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                             ...|+.+|...+.+.+.++.+   .++++.+++||.+.|+..... .........+..         ....++
T Consensus       144 -------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  207 (248)
T PRK10538        144 -------GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY---------QNTVAL  207 (248)
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhc---------cccCCC
Confidence                   137999999999999888755   479999999999987643210 000000001100         122457


Q ss_pred             eHHHHHHHHHHhhcCCC
Q 020110          230 PVKDVAKAQVLLFESPA  246 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~  246 (331)
                      ..+|+|++++.++..+.
T Consensus       208 ~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        208 TPEDVSEAVWWVATLPA  224 (248)
T ss_pred             CHHHHHHHHHHHhcCCC
Confidence            89999999999887553

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.86  E-value=1.7e-20  Score=158.56  Aligned_cols=208  Identities=16%  Similarity=0.130  Sum_probs=141.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEE-ecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      |+++|||||+|+||++++++|+++|+ +|++. .|+........ ....... ++..+.+|+.|++++.++++       
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGG-KAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCC-eEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            56899999999999999999999999 88764 45433222111 1111112 67889999999998887765       


Q ss_pred             CccEEEEcccCCCCCC-----CCCchhhhhHHHHHHHHHHHHHHHhC-------CCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKRF-------GVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                      .+|+|||+|+......     ..++....+++|+.++.++++++...       +.++||++||..++++.++.      
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~------  152 (247)
T PRK09730         79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE------  152 (247)
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc------
Confidence            3689999998653211     11223578999999998887765432       13469999997665543321      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                   ...|+.+|...+.+++.++.+   .+++++++||+.++||......  ............+.     
T Consensus       153 -------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~~-----  212 (247)
T PRK09730        153 -------------YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG--EPGRVDRVKSNIPM-----  212 (247)
T ss_pred             -------------ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC--CHHHHHHHHhcCCC-----
Confidence                         026999999999888877644   4899999999999999643221  11222222222211     


Q ss_pred             CCCceeHHHHHHHHHHhhcCC
Q 020110          225 WLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~  245 (331)
                       .-..+++|+++++..++...
T Consensus       213 -~~~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        213 -QRGGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             -CCCcCHHHHHHHHHhhcChh
Confidence             11347899999999888654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.86  E-value=9.5e-21  Score=167.12  Aligned_cols=261  Identities=21%  Similarity=0.259  Sum_probs=176.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccchhhcC----------------CCCCCCcEEEEEccCC
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFAL----------------PGAGDANLRVFEADVL   69 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~----------------~~~~~~~~~~~~~Dl~   69 (331)
                      +.|+|||||||||+|..+++.|+..-  ..+++.+.|.+...+...++                +.... ++..+.||++
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~-Kv~pi~GDi~   89 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALE-KVVPIAGDIS   89 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCcccee-cceecccccc
Confidence            46899999999999999999999863  34889998865443222211                11112 6788889998


Q ss_pred             Cc------hHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceeccCCCC-
Q 020110           70 DS------GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGW-  141 (331)
Q Consensus        70 ~~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~-  141 (331)
                      ++      .+.+.+.+++|+|||+||.+..   .+.......+|+.|++++++.|++. +.+-+||+||+++- -..+. 
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrF---de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~~~i  165 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRF---DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNVGHI  165 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeecc---chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-cccccc
Confidence            64      4455567889999999998664   3335677899999999999999988 68889999997665 22221 


Q ss_pred             CCccccCCCCCC--------------------hhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCC
Q 020110          142 KGKVFDETSWTD--------------------LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP  201 (331)
Q Consensus       142 ~~~~~~E~~~~~--------------------~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~  201 (331)
                      ...++.+....+                    +.......+.|..+|..+|.++..+  ..+++++|+||+.|......+
T Consensus       166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~--~~~lPivIiRPsiI~st~~EP  243 (467)
T KOG1221|consen  166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE--AENLPLVIIRPSIITSTYKEP  243 (467)
T ss_pred             cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh--ccCCCeEEEcCCceeccccCC
Confidence            222222222111                    1111223568999999999999876  467999999999999987765


Q ss_pred             CCChhHH------HHHHHHcCCCCc---cCcCCCCceeHHHHHHHHHHhhc-----CCC-CCceEEEec---cccCHHHH
Q 020110          202 YLNASCA------VLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVLLFE-----SPA-ASGRYLCTN---GIYQFGDF  263 (331)
Q Consensus       202 ~~~~~~~------~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~~~~l~-----~~~-~~g~~~~~~---~~~s~~e~  263 (331)
                      ..+++.+      ++.....|....   .++...|+|++|.++.+++.+.-     ... ...+|++++   .+++|.++
T Consensus       244 ~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~  323 (467)
T KOG1221|consen  244 FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDF  323 (467)
T ss_pred             CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHH
Confidence            3332211      111111121111   24478999999999999986541     111 122787654   34899999


Q ss_pred             HHHHHHhCCCCC
Q 020110          264 AERVSKLFPEFP  275 (331)
Q Consensus       264 ~~~i~~~~~~~~  275 (331)
                      .+...+.....|
T Consensus       324 ~e~~~~~~~~~P  335 (467)
T KOG1221|consen  324 IELALRYFEKIP  335 (467)
T ss_pred             HHHHHHhcccCC
Confidence            999998874333

>PRK08264 short chain dehydrogenase; Validated

Probab=99.86  E-value=3.7e-20  Score=155.69  Aligned_cols=164  Identities=23%  Similarity=0.224  Sum_probs=126.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---CccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~v   84 (331)
                      +.++|+||||+|+||++++++|+++|+.+|++++|+......      ... ++.++.+|+.+++++.++++   .+|+|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------~~~-~~~~~~~D~~~~~~~~~~~~~~~~id~v   77 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------LGP-RVVPLQLDVTDPASVAAAAEAASDVTIL   77 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------cCC-ceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            457999999999999999999999996578989887654332      111 78899999999999888776   47999


Q ss_pred             EEcccCCC-C----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           85 FHVASPCT-L----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        85 ih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      ||+|+... .    ....+.....+++|+.++.++++++.    ..+.+++|++||...+.+.++.              
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~--------------  143 (238)
T PRK08264         78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNL--------------  143 (238)
T ss_pred             EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCc--------------
Confidence            99999732 2    12233346778899999999999864    3456789999997554322221              


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCC
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPL  198 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~  198 (331)
                            ..|+.+|...+.+.+.++.+   .+++++++||+.+.++.
T Consensus       144 ------~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        144 ------GTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             ------hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence                  37999999999998887755   38999999999997764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.86  E-value=5.2e-20  Score=158.45  Aligned_cols=216  Identities=16%  Similarity=0.118  Sum_probs=147.4

Q ss_pred             CcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--
Q 020110            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (331)
Q Consensus         2 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   79 (331)
                      +.+.+.+.|+++||||+|+||++++++|+++|+ +|++++|+......+.+.....+.++.++++|+.+++++.++++  
T Consensus         3 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (278)
T PRK08277          3 PNLFSLKGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQI   81 (278)
T ss_pred             CceeccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            334344568999999999999999999999999 99999987543322221111111168889999999988876654  


Q ss_pred             -----CccEEEEcccCCCCCC-------------------CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCc
Q 020110           80 -----GCKGVFHVASPCTLED-------------------PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSS  131 (331)
Q Consensus        80 -----~~d~vih~a~~~~~~~-------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS  131 (331)
                           .+|++||+|+......                   ..++....+++|+.++..+++++    ++.+..++|++||
T Consensus        82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS  161 (278)
T PRK08277         82 LEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISS  161 (278)
T ss_pred             HHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence                 5899999998643211                   12334677899999988766654    3345578999999


Q ss_pred             cceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCC----C
Q 020110          132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL----N  204 (331)
Q Consensus       132 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~----~  204 (331)
                      ..++.+.++.                    ..|+.+|...+.+.+.++.+.   ++++.+++|+.+.++......    .
T Consensus       162 ~~~~~~~~~~--------------------~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~  221 (278)
T PRK08277        162 MNAFTPLTKV--------------------PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDG  221 (278)
T ss_pred             chhcCCCCCC--------------------chhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccc
Confidence            7554322221                    379999999999998887664   799999999999988532110    0


Q ss_pred             hhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcC
Q 020110          205 ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      ........+....      ....+...+|+|+++++++..
T Consensus       222 ~~~~~~~~~~~~~------p~~r~~~~~dva~~~~~l~s~  255 (278)
T PRK08277        222 SLTERANKILAHT------PMGRFGKPEELLGTLLWLADE  255 (278)
T ss_pred             cchhHHHHHhccC------CccCCCCHHHHHHHHHHHcCc
Confidence            0001111111111      123467789999999998865

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6.6e-20  Score=155.80  Aligned_cols=216  Identities=19%  Similarity=0.123  Sum_probs=153.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +.++||||||+|+||++++++|+++|+ +|+++.|+............  . .+.++.+|+++++++.++++       +
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   89 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLG--G-NAKGLVCDVSDSQSVEAAVAAVISAFGR   89 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhC--C-ceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            457999999999999999999999999 99999987643222222211  1 57789999999988877764       4


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+|+......    ..++....+++|+.++.++++++..    .+.++||++||....++.+..           
T Consensus        90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  158 (255)
T PRK06841         90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERH-----------  158 (255)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCC-----------
Confidence            799999999754321    1223456789999999999998754    356789999997655443321           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   .+++++.++|+.+..+........  ........+.      ....+.
T Consensus       159 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~------~~~~~~  221 (255)
T PRK06841        159 ---------VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAG--EKGERAKKLI------PAGRFA  221 (255)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccch--hHHHHHHhcC------CCCCCc
Confidence                     37999999999888887765   489999999999988753221110  1111111111      134578


Q ss_pred             eHHHHHHHHHHhhcCCC--CCceE-EEec
Q 020110          230 PVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~--~~g~~-~~~~  255 (331)
                      +++|++++++.++....  ..|.. .+.+
T Consensus       222 ~~~~va~~~~~l~~~~~~~~~G~~i~~dg  250 (255)
T PRK06841        222 YPEEIAAAALFLASDAAAMITGENLVIDG  250 (255)
T ss_pred             CHHHHHHHHHHHcCccccCccCCEEEECC
Confidence            99999999999987643  35644 4433

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.4e-20  Score=157.80  Aligned_cols=217  Identities=18%  Similarity=0.173  Sum_probs=147.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC-Cccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +++|||||+|+||++++++|++.|+ .|+...++. ........ +..... ++.++.+|++|.+++.++++       .
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGY-AVCLNYLRNRDAAEAVVQAIRRQGG-EALAVAADVADEADVLRLFEAVDRELGR   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-eEEEecCCCHHHHHHHHHHHHhCCC-cEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999 777665432 22111111 111111 67889999999988887775       5


Q ss_pred             ccEEEEcccCCCCCC-----CCCchhhhhHHHHHHHHHHHHHHHhCC-------CCEEEEeCccceeccCCCCCCccccC
Q 020110           81 CKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKRFG-------VRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        81 ~d~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                      +|+|||+|+......     ..++....+++|+.++.++++++...-       -.++|++||..++++.+..       
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------  153 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE-------  153 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC-------
Confidence            799999998754311     122345779999999999888775431       2369999997665543321       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                  ...|+.+|...+.+++.++++.   +++++++||+.++|+......  ....+.......+.      
T Consensus       154 ------------~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~--~~~~~~~~~~~~p~------  213 (248)
T PRK06123        154 ------------YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG--EPGRVDRVKAGIPM------  213 (248)
T ss_pred             ------------ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC--CHHHHHHHHhcCCC------
Confidence                        0259999999999998887654   899999999999998643211  11222222222221      


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      .-+.+++|+++++..++....  ..| .|++.+
T Consensus       214 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        214 GRGGTAEEVARAILWLLSDEASYTTGTFIDVSG  246 (248)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence            123478999999998887542  345 455543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.86  E-value=3.9e-20  Score=157.54  Aligned_cols=222  Identities=19%  Similarity=0.162  Sum_probs=151.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +.|++|||||+|+||++++++|+++|+ +|++++|+..............+.++.++.+|++|++++.++++       .
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            357999999999999999999999999 99999987644322221111111167889999999998866553       4


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC-----CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|+|||+|+.....    ...+.....++.|+.++.++++++...     +.++||++||...+++.+..    .     
T Consensus        90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~----~-----  160 (259)
T PRK08213         90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE----V-----  160 (259)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc----c-----
Confidence            79999999864321    122334567889999999999987543     56789999997555443221    0     


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                             .+...|+.+|...+.+++.++++   .++++.+++|+.+-++....   ...........+.++      .-+
T Consensus       161 -------~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~---~~~~~~~~~~~~~~~------~~~  224 (259)
T PRK08213        161 -------MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG---TLERLGEDLLAHTPL------GRL  224 (259)
T ss_pred             -------cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh---hhHHHHHHHHhcCCC------CCC
Confidence                   01137999999999999988765   37999999999887764322   122223333333222      234


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          229 VPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      ...+|++.++.+++...  ...|.. .+.+
T Consensus       225 ~~~~~va~~~~~l~~~~~~~~~G~~~~~~~  254 (259)
T PRK08213        225 GDDEDLKGAALLLASDASKHITGQILAVDG  254 (259)
T ss_pred             cCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence            56899999988887654  234543 4443

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1e-19  Score=156.30  Aligned_cols=210  Identities=19%  Similarity=0.168  Sum_probs=145.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      ||++|||||+|+||++++++|+++|+ +|++++|+......+...      ++.++.+|+++.+++.++++       ++
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~------~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAA------GFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC------CCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999 999999876544333221      56788999999988877663       57


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh---CCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      |+|||+||......    ..++....+++|+.++.++++++..   .+..++|++||..+..+.+..             
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  140 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFA-------------  140 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCc-------------
Confidence            99999999654322    2234567789999999999988743   234689999987554432221             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCCh----------hHHH---HHHHHcCCC
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA----------SCAV---LQQLLQGSK  218 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~----------~~~~---~~~~~~~~~  218 (331)
                             ..|+.+|...+.+.+.++.+   .|+++++++||.+.++........          ....   +......  
T Consensus       141 -------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  211 (274)
T PRK05693        141 -------GAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARA--  211 (274)
T ss_pred             -------cHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHh--
Confidence                   37999999999988777644   689999999999987643211000          0000   0000000  


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCCCCCceEE
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYL  252 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~~~  252 (331)
                           ..-.....+|+|+.++.++........+.
T Consensus       212 -----~~~~~~~~~~~a~~i~~~~~~~~~~~~~~  240 (274)
T PRK05693        212 -----SQDNPTPAAEFARQLLAAVQQSPRPRLVR  240 (274)
T ss_pred             -----ccCCCCCHHHHHHHHHHHHhCCCCCceEE
Confidence                 00123568999999988887655444443

>PRK08017 oxidoreductase; Provisional

Probab=99.86  E-value=3.8e-20  Score=157.38  Aligned_cols=224  Identities=21%  Similarity=0.221  Sum_probs=150.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--------Cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------GC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~~   81 (331)
                      ++|+||||+|+||+++++.|+++|+ +|+++.|+..........      +++.+.+|+.+.+++.++++        .+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~   75 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSL------GFTGILLDLDDPESVERAADEVIALTDNRL   75 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhC------CCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            5899999999999999999999999 999999876554433322      57788999999887665542        36


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHH----HHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNV----LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |.+||++|......    ..+.....++.|+.++.++    ++++++.+.+++|++||..+..+.+.             
T Consensus        76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-------------  142 (256)
T PRK08017         76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPG-------------  142 (256)
T ss_pred             eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCC-------------
Confidence            89999998643211    2223457889999988776    55666677789999998644332211             


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHH---HHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCce
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAV  229 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v  229 (331)
                             ...|+.+|...|.+.+.++   ...+++++++||+.+.++.....        .......+.. .+...+.++
T Consensus       143 -------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~  207 (256)
T PRK08017        143 -------RGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNV--------NQTQSDKPVENPGIAARFTL  207 (256)
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcc--------cchhhccchhhhHHHhhcCC
Confidence                   1379999999998876543   35689999999988765432110        0000011111 111335689


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCC
Q 020110          230 PVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFP  272 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~  272 (331)
                      +++|+++++..++.++.....+  .  ...+..++..+.+.+|
T Consensus       208 ~~~d~a~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~p  246 (256)
T PRK08017        208 GPEAVVPKLRHALESPKPKLRY--P--VTLVTHAVMVLKRLLP  246 (256)
T ss_pred             CHHHHHHHHHHHHhCCCCCcee--e--cCcchHHHHHHHHHCC
Confidence            9999999999999876544323  1  1112244555555554

>PRK07985 oxidoreductase; Provisional

Probab=99.86  E-value=3.4e-20  Score=160.54  Aligned_cols=209  Identities=16%  Similarity=0.127  Sum_probs=146.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc--cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .|++|||||+|+||++++++|+++|+ +|++..|+...  ...+.+.....+.++.++.+|+++.+++.++++       
T Consensus        49 ~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         49 DRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            47999999999999999999999999 99987764322  112221111111267889999999988776654       


Q ss_pred             CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      ++|++||+|+....     +...+++...+++|+.++..+++++...  .-.++|++||..++.+.++.           
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~-----------  196 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHL-----------  196 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCc-----------
Confidence            47999999986421     2223445788999999999999988653  22589999997554332221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   +|+++.+++|+.+.++....... ............      ....+.
T Consensus       197 ---------~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~------~~~r~~  260 (294)
T PRK07985        197 ---------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ-TQDKIPQFGQQT------PMKRAG  260 (294)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC-CHHHHHHHhccC------CCCCCC
Confidence                     37999999999999888765   58999999999999986321110 111111221111      123456


Q ss_pred             eHHHHHHHHHHhhcCC
Q 020110          230 PVKDVAKAQVLLFESP  245 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~  245 (331)
                      ..+|+|+++.+++...
T Consensus       261 ~pedva~~~~fL~s~~  276 (294)
T PRK07985        261 QPAELAPVYVYLASQE  276 (294)
T ss_pred             CHHHHHHHHHhhhChh
Confidence            7899999999988754

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.3e-20  Score=158.24  Aligned_cols=204  Identities=16%  Similarity=0.142  Sum_probs=144.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      |+|+||||+|+||++++++|++.|+ +|++++|+......... +...+. ++.++.+|+.+++++.++++       ++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGG-DGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999999 99999887654332221 111122 68889999999988877664       58


Q ss_pred             cEEEEcccCCCCCCCC----CchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+||........    ++....+++|+.++.++.+++    ++.+.+++|++||..++.+.++.            
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~------------  146 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAM------------  146 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCc------------
Confidence            9999999976542222    223556789988888766654    55567799999997554332221            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChh---HHHHHHHHcCCCCccCcCCCC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS---CAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  227 (331)
                              ..|+.+|...+.+.+.++.+   .++++++++|+.+.++.........   ...+....          ...
T Consensus       147 --------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~----------~~~  208 (270)
T PRK05650        147 --------SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLL----------EKS  208 (270)
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHh----------hcC
Confidence                    37999999988888877755   4899999999999887543211111   11111111          124


Q ss_pred             ceeHHHHHHHHHHhhcCC
Q 020110          228 AVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~  245 (331)
                      +++++|+|+.++.++...
T Consensus       209 ~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        209 PITAADIADYIYQQVAKG  226 (270)
T ss_pred             CCCHHHHHHHHHHHHhCC
Confidence            588999999999999854

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3e-20  Score=158.34  Aligned_cols=203  Identities=23%  Similarity=0.193  Sum_probs=145.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~   80 (331)
                      ||++|||||+|+||++++++|+++|+ +|++++|+......+.....  +.++.++.+|+++.+++.++++        +
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999 99999987655443322211  1268899999999988877654        4


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+||......    ..++....+++|+.++.++++++.    ..+..++|++||..+.++..+.           
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----------  146 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGL-----------  146 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCc-----------
Confidence            699999999764322    223357789999999999988874    3345789999997666654332           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   .++++++++|+.+..+.........   ......        ...-.+
T Consensus       147 ---------~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---~~~~~~--------~~~~~~  206 (260)
T PRK08267        147 ---------AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEV---DAGSTK--------RLGVRL  206 (260)
T ss_pred             ---------hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchh---hhhhHh--------hccCCC
Confidence                     37999999999988887644   4799999999998776432200000   000000        011235


Q ss_pred             eHHHHHHHHHHhhcCC
Q 020110          230 PVKDVAKAQVLLFESP  245 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~  245 (331)
                      ..+|++++++.++...
T Consensus       207 ~~~~va~~~~~~~~~~  222 (260)
T PRK08267        207 TPEDVAEAVWAAVQHP  222 (260)
T ss_pred             CHHHHHHHHHHHHhCC
Confidence            6799999999998644

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6.2e-20  Score=156.44  Aligned_cols=219  Identities=19%  Similarity=0.207  Sum_probs=150.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|++|||||+|.||++++++|+++|+ +|++++|+......+....  .. ++.++.+|+++++++.++++       .
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   80 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASL--GE-RARFIATDITDDAAIERAVATVVARFGR   80 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--CC-eeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            457999999999999999999999999 9999999765433332221  11 68899999999988877765       4


Q ss_pred             ccEEEEcccCCCC---CCCCCchhhhhHHHHHHHHHHHHHHHh---CCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           81 CKGVFHVASPCTL---EDPVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        81 ~d~vih~a~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +|++||+|+....   ....+++...+++|+.++..+++++..   .+..++|++||....++.++.             
T Consensus        81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-------------  147 (261)
T PRK08265         81 VDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGR-------------  147 (261)
T ss_pred             CCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCC-------------
Confidence            7999999986432   122334567789999999999887653   234689999997665543322             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                             ..|+.+|...+.+.+.++.+   +++++++++|+.+.++................... ..    ....+...
T Consensus       148 -------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~-~~----p~~r~~~p  215 (261)
T PRK08265        148 -------WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP-FH----LLGRVGDP  215 (261)
T ss_pred             -------chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc-cC----CCCCccCH
Confidence                   37999999999999887755   47999999999987764221000000001111100 00    12235678


Q ss_pred             HHHHHHHHHhhcCCC--CCce-EEEec
Q 020110          232 KDVAKAQVLLFESPA--ASGR-YLCTN  255 (331)
Q Consensus       232 ~D~a~a~~~~l~~~~--~~g~-~~~~~  255 (331)
                      +|+|+++.+++....  ..|. +.+.+
T Consensus       216 ~dva~~~~~l~s~~~~~~tG~~i~vdg  242 (261)
T PRK08265        216 EEVAQVVAFLCSDAASFVTGADYAVDG  242 (261)
T ss_pred             HHHHHHHHHHcCccccCccCcEEEECC
Confidence            999999999987532  3453 44443

>PRK06196 oxidoreductase; Provisional

Probab=99.86  E-value=8.7e-20  Score=159.72  Aligned_cols=222  Identities=19%  Similarity=0.083  Sum_probs=144.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|+|+||||+|+||++++++|++.|+ +|+++.|+............    ++.++.+|++|.+++.++++       +
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSGRR   99 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            357899999999999999999999999 99999997654332221111    47789999999998887763       4


Q ss_pred             ccEEEEcccCCCC--CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           81 CKGVFHVASPCTL--EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        81 ~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +|+|||+||....  ....+..+..+++|+.++..+++++    ++.+..++|++||..........  .......+..+
T Consensus       100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~--~~~~~~~~~~~  177 (315)
T PRK06196        100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRW--DDPHFTRGYDK  177 (315)
T ss_pred             CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCc--cccCccCCCCh
Confidence            8999999997543  1223345778999999977666644    44455799999997433221111  00000111111


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                            ...|+.+|...+.+.+.++++   .|+++++++||.+.++..... ..................   ...+..+
T Consensus       178 ------~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~  247 (315)
T PRK06196        178 ------WLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHL-PREEQVALGWVDEHGNPI---DPGFKTP  247 (315)
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccC-Chhhhhhhhhhhhhhhhh---hhhcCCH
Confidence                  137999999999998887654   489999999999999864321 110000000000000000   0124578


Q ss_pred             HHHHHHHHHhhcCCC
Q 020110          232 KDVAKAQVLLFESPA  246 (331)
Q Consensus       232 ~D~a~a~~~~l~~~~  246 (331)
                      +|+|.++++++..+.
T Consensus       248 ~~~a~~~~~l~~~~~  262 (315)
T PRK06196        248 AQGAATQVWAATSPQ  262 (315)
T ss_pred             hHHHHHHHHHhcCCc
Confidence            999999998886543

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.3e-19  Score=154.40  Aligned_cols=220  Identities=17%  Similarity=0.164  Sum_probs=149.1

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      |+.....+.|+||||||+|+||++++++|.++|+ +|+++.|+.....        .. ++.++.+|++|++++.++++ 
T Consensus         1 ~~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~--------~~-~~~~~~~D~~~~~~~~~~~~~   70 (260)
T PRK06523          1 MSFFLELAGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL--------PE-GVEFVAADLTTAEGCAAVARA   70 (260)
T ss_pred             CCcCcCCCCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc--------CC-ceeEEecCCCCHHHHHHHHHH
Confidence            4444445568999999999999999999999999 9999998754311        11 67889999999988776553 


Q ss_pred             ------CccEEEEcccCCCC------CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCC
Q 020110           80 ------GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKG  143 (331)
Q Consensus        80 ------~~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  143 (331)
                            .+|+|||+||....      ....+++...+++|+.++.++.+++    ++.+.+++|++||.....+.+.   
T Consensus        71 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~---  147 (260)
T PRK06523         71 VLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPE---  147 (260)
T ss_pred             HHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC---
Confidence                  57999999985421      1223345777899999998776655    3445578999999744322110   


Q ss_pred             ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC--------hhHHHHHH
Q 020110          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQ  212 (331)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~--------~~~~~~~~  212 (331)
                                      ....|+.+|...+.+.+.++.+   .++++++++|+.+.++.......        ........
T Consensus       148 ----------------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  211 (260)
T PRK06523        148 ----------------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQI  211 (260)
T ss_pred             ----------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHH
Confidence                            1137999999999998888755   47999999999999885321000        00000001


Q ss_pred             H---HcCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEec
Q 020110          213 L---LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTN  255 (331)
Q Consensus       213 ~---~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~  255 (331)
                      +   ..+.      ....+..++|+++++.+++...  ...| .+.+.+
T Consensus       212 ~~~~~~~~------p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdg  254 (260)
T PRK06523        212 IMDSLGGI------PLGRPAEPEEVAELIAFLASDRAASITGTEYVIDG  254 (260)
T ss_pred             HHHHhccC------ccCCCCCHHHHHHHHHHHhCcccccccCceEEecC
Confidence            1   1111      1223567899999999988653  2345 455544

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.2e-19  Score=152.28  Aligned_cols=212  Identities=17%  Similarity=0.115  Sum_probs=149.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +.|++|||||+|+||++++++|++.|+ +|++++|+....    .    .+.++.++.+|+.+++++.++++       +
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~----~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET----V----DGRPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh----h----cCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 999999876431    0    01168899999999988887765       3


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh-----CCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|+|||+||.....    ...+.....+++|+.++.++++++..     .+..++|++||.....+.++.          
T Consensus        76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~----------  145 (252)
T PRK07856         76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGT----------  145 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCC----------
Confidence            69999999865432    12233467899999999999998754     134689999997554332221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                                ..|+.+|...+.+.+.++.+.  .+++..++|+.+.++....... .......+....      ....+.
T Consensus       146 ----------~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~~  208 (252)
T PRK07856        146 ----------AAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYG-DAEGIAAVAATV------PLGRLA  208 (252)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhcc-CHHHHHHHhhcC------CCCCCc
Confidence                      379999999999999888654  3899999999998775321111 011111111111      123356


Q ss_pred             eHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          230 PVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      .++|+|+++++++...  ...|.. .+.+
T Consensus       209 ~p~~va~~~~~L~~~~~~~i~G~~i~vdg  237 (252)
T PRK07856        209 TPADIAWACLFLASDLASYVSGANLEVHG  237 (252)
T ss_pred             CHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence            7899999999888653  245643 4443

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.85  E-value=6.4e-20  Score=154.92  Aligned_cols=216  Identities=19%  Similarity=0.164  Sum_probs=147.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +++++|||||+|+||+++++.|+++|+ .|+...|+......+....  .. ++.++.+|+++.+++.++++       +
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAEL--GE-RVKIFPANLSDRDEVKALGQKAEADLEG   80 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh--CC-ceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999 9988877654433322211  11 68889999999988877653       5


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+|+.....    ...+++...+++|+.++.++++++..    .+.+++|++||....++.+..           
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  149 (245)
T PRK12936         81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQ-----------  149 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCC-----------
Confidence            89999999875431    12234567789999999988887642    356789999997666544332           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++++   .++++++++|+.+.++..... .   ........+ ..    ....+.
T Consensus       150 ---------~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~-~---~~~~~~~~~-~~----~~~~~~  211 (245)
T PRK12936        150 ---------ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL-N---DKQKEAIMG-AI----PMKRMG  211 (245)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc-C---hHHHHHHhc-CC----CCCCCc
Confidence                     26999999888777766544   479999999998866543211 1   001111111 01    123366


Q ss_pred             eHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          230 PVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ..+|+++++.+++....  ..| .+++.++
T Consensus       212 ~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        212 TGAEVASAVAYLASSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             CHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence            79999999988876543  245 4555443

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=2.1e-19  Score=150.77  Aligned_cols=200  Identities=16%  Similarity=0.145  Sum_probs=143.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc-hHHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~vih~   87 (331)
                      .|+++||||+|+||++++++|+++|+ +|+++.|+.....        .. ++.++.+|+.++ +.+.+.+..+|+|||+
T Consensus         5 ~k~~lVtGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~--------~~-~~~~~~~D~~~~~~~~~~~~~~id~lv~~   74 (235)
T PRK06550          5 TKTVLITGAASGIGLAQARAFLAQGA-QVYGVDKQDKPDL--------SG-NFHFLQLDLSDDLEPLFDWVPSVDILCNT   74 (235)
T ss_pred             CCEEEEcCCCchHHHHHHHHHHHCCC-EEEEEeCCccccc--------CC-cEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence            47999999999999999999999999 9999988754321        11 688899999987 4444445678999999


Q ss_pred             ccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           88 ASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        88 a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      |+....     ....++....+++|+.++.++++++..    .+.+++|++||..+..+.++.                 
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------------  137 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGG-----------------  137 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCC-----------------
Confidence            986421     122334567899999999999998753    344689999997654433221                 


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHH
Q 020110          159 SRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA  235 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  235 (331)
                         ..|+.+|...+.+.+.++.+.   |+++++++|+.+.++....... ............      ....+...+|+|
T Consensus       138 ---~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~a  207 (235)
T PRK06550        138 ---AAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE-PGGLADWVARET------PIKRWAEPEEVA  207 (235)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC-chHHHHHHhccC------CcCCCCCHHHHH
Confidence               379999999998888777554   8999999999998886432211 111111222211      134467889999


Q ss_pred             HHHHHhhcCC
Q 020110          236 KAQVLLFESP  245 (331)
Q Consensus       236 ~a~~~~l~~~  245 (331)
                      ++++.++...
T Consensus       208 ~~~~~l~s~~  217 (235)
T PRK06550        208 ELTLFLASGK  217 (235)
T ss_pred             HHHHHHcChh
Confidence            9999998653

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-19  Score=154.50  Aligned_cols=215  Identities=20%  Similarity=0.206  Sum_probs=147.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      .++++||||+|+||++++++|+++|+ +|++++|+........+...... ++.++.+|+.+++++.++++       .+
T Consensus         6 ~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          6 GKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGH-RCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCC-ceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999 99999887532222222111112 67889999999988887765       47


Q ss_pred             cEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCcccee-ccCCCCCCccccCCCCC
Q 020110           82 KGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAI-VPNPGWKGKVFDETSWT  152 (331)
Q Consensus        82 d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~-~~~~~~~~~~~~E~~~~  152 (331)
                      |+|||+|+.......    .+.....+++|+.++.++++++..    .+..++|++||.... .+.++            
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------  151 (263)
T PRK08226         84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPG------------  151 (263)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCC------------
Confidence            999999997543221    222355689999999999988653    345689999986431 11111            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCC-----ChhHHHHHHHHcCCCCccCcC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL-----NASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  224 (331)
                              ...|+.+|...+.+.+.++++.   +++++.++||.+.++......     ......+..+..+.+      
T Consensus       152 --------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p------  217 (263)
T PRK08226        152 --------ETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP------  217 (263)
T ss_pred             --------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC------
Confidence                    1379999999999998887654   799999999999887432100     001122223322211      


Q ss_pred             CCCceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          225 WLGAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      ...+...+|+|+++..++...  ...|..
T Consensus       218 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~  246 (263)
T PRK08226        218 LRRLADPLEVGELAAFLASDESSYLTGTQ  246 (263)
T ss_pred             CCCCCCHHHHHHHHHHHcCchhcCCcCce
Confidence            234578999999998887543  345644

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.85  E-value=9.7e-20  Score=155.44  Aligned_cols=211  Identities=16%  Similarity=0.100  Sum_probs=147.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+++++|||||+|+||.+++++|+++|+ +|++++|+......+.......+.++.++.+|+++++++.++++       
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3467999999999999999999999999 99999997644332221111111268889999999998876664       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh-----CCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      ++|+|||+|+.....    ...+.....+++|+.++.++.+++..     .+.+++|++||..+..+.++.         
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~---------  157 (263)
T PRK07814         87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGF---------  157 (263)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCC---------
Confidence            579999999864331    22244577899999999999999864     355789999997554332221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                 ..|+.+|...+.+.+.++.+.  +++++.++|+.+.++..... .....+ .....+..     ....+
T Consensus       158 -----------~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~-~~~~~~-~~~~~~~~-----~~~~~  219 (263)
T PRK07814        158 -----------AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVV-AANDEL-RAPMEKAT-----PLRRL  219 (263)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhc-cCCHHH-HHHHHhcC-----CCCCC
Confidence                       379999999999999887653  57899999999877643210 001111 11111110     12235


Q ss_pred             eeHHHHHHHHHHhhcCC
Q 020110          229 VPVKDVAKAQVLLFESP  245 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~  245 (331)
                      ..++|+|+++++++...
T Consensus       220 ~~~~~va~~~~~l~~~~  236 (263)
T PRK07814        220 GDPEDIAAAAVYLASPA  236 (263)
T ss_pred             cCHHHHHHHHHHHcCcc
Confidence            68899999999988653

>PRK08324 short chain dehydrogenase; Validated

Probab=99.85  E-value=4.5e-20  Score=176.67  Aligned_cols=223  Identities=21%  Similarity=0.181  Sum_probs=155.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ..++||||||+|+||+++++.|++.|+ +|++++|+............... ++.++.+|+++++++.++++       +
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r~~~~~~~~~~~l~~~~-~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADLDEEAAEAAAAELGGPD-RALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHhccC-cEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            347999999999999999999999999 99999998654333222111112 68899999999988877664       5


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCC-CEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGV-RRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|+|||+||......    ..+.+...+++|+.++.++++++.    +.+. .+||++||..++++.++.          
T Consensus       499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~----------  568 (681)
T PRK08324        499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNF----------  568 (681)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCc----------
Confidence            899999999654321    223346778999999999977764    3343 689999997665543321          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCccc-CCCCCCCCChhHHHHHHHHcCCCC-------c
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCL-GPLMQPYLNASCAVLQQLLQGSKD-------T  220 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~-------~  220 (331)
                                ..|+.+|...+.+++.++.+.   |+++++++|+.+| +....... .  ........+...       .
T Consensus       569 ----------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~-~--~~~~~~~~g~~~~~~~~~~~  635 (681)
T PRK08324        569 ----------GAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGE-W--IEARAAAYGLSEEELEEFYR  635 (681)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccch-h--hhhhhhhccCChHHHHHHHH
Confidence                      379999999999999887654   6999999999998 55432110 0  000111111110       0


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhc--CCCCCc-eEEEec
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFE--SPAASG-RYLCTN  255 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~--~~~~~g-~~~~~~  255 (331)
                      .+...+.+++++|+|+++..++.  .....| ++++.+
T Consensus       636 ~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdg  673 (681)
T PRK08324        636 ARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDG  673 (681)
T ss_pred             hcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence            12346789999999999999884  334455 566654

>PRK06398 aldose dehydrogenase; Validated

Probab=99.85  E-value=2e-19  Score=152.98  Aligned_cols=200  Identities=15%  Similarity=0.111  Sum_probs=142.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+.....           ++.++.+|++|++++.++++       +
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----------~~~~~~~D~~~~~~i~~~~~~~~~~~~~   72 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----------DVDYFKVDVSNKEQVIKGIDYVISKYGR   72 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----------ceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 9999988754310           57889999999988877664       5


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+||......    ..++....+++|+.++..+++++..    .+.+++|++||..+..+.+..           
T Consensus        73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  141 (258)
T PRK06398         73 IDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNA-----------  141 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCC-----------
Confidence            799999999754321    2233466789999999998887643    355789999997554322211           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCC------Ch--hHHHHHHHHcCCCCccC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYL------NA--SCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~------~~--~~~~~~~~~~~~~~~~~  222 (331)
                               ..|+.+|...+.+.+.++.+.  ++++++++||.+-++......      ..  .......+...  .   
T Consensus       142 ---------~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---  207 (258)
T PRK06398        142 ---------AAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEM--H---  207 (258)
T ss_pred             ---------chhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhc--C---
Confidence                     379999999999999888664  489999999998776421100      00  00001111111  0   


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCC
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                       ....+..++|+|+++++++...
T Consensus       208 -~~~~~~~p~eva~~~~~l~s~~  229 (258)
T PRK06398        208 -PMKRVGKPEEVAYVVAFLASDL  229 (258)
T ss_pred             -CcCCCcCHHHHHHHHHHHcCcc
Confidence             1234678999999999888653

>PRK09186 flagellin modification protein A; Provisional

Probab=99.85  E-value=1.1e-19  Score=154.65  Aligned_cols=223  Identities=20%  Similarity=0.222  Sum_probs=147.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCC-CCCcEEEEEccCCCchHHHHHhcC------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVEG------   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~------   80 (331)
                      .|+||||||+|+||+++++.|++.|+ +|+++.|++....... ++... ....+.++.+|++|++++.+++++      
T Consensus         4 ~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          4 GKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999 9999988765433221 11000 111466779999999988877753      


Q ss_pred             -ccEEEEcccCCCC-------CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           81 -CKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        81 -~d~vih~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                       +|+|||+|+....       +...+.....+++|+.++..+++++    ++.+.+++|++||..+.++..    ....+
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----~~~~~  158 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPK----FEIYE  158 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcccc----chhcc
Confidence             7999999975321       1112234667888887777666654    444667999999975544321    11122


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                      +.+....      ..|+.+|...+.+.+.++.+   .++++++++|+.++++...       .+........      ..
T Consensus       159 ~~~~~~~------~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~-------~~~~~~~~~~------~~  219 (256)
T PRK09186        159 GTSMTSP------VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE-------AFLNAYKKCC------NG  219 (256)
T ss_pred             ccccCCc------chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH-------HHHHHHHhcC------Cc
Confidence            2221111      26999999999998877754   5799999999988765311       1111111111      12


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g~~-~~~~  255 (331)
                      ..+++++|+|+++..++....  ..|.+ .+.+
T Consensus       220 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  252 (256)
T PRK09186        220 KGMLDPDDICGTLVFLLSDQSKYITGQNIIVDD  252 (256)
T ss_pred             cCCCCHHHhhhhHhheeccccccccCceEEecC
Confidence            357899999999999997543  34644 4443

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=9.5e-20  Score=154.04  Aligned_cols=212  Identities=18%  Similarity=0.158  Sum_probs=147.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEE-ecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      |++||||||+|+||.+++++|++.|+ +|+++ .|++........ +..... ++.++.+|+++++++.++++       
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGG-DAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            57999999999999999999999999 99888 776544322221 111112 68899999999998877765       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+++.....    ...+.....+++|+.++.++++++..    .+.+++|++||...+++.+..          
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~----------  152 (247)
T PRK05565         83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCE----------  152 (247)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCc----------
Confidence            689999999976432    12233467789999998888887654    355789999997665543321          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+++.++++   .+++++++||+.+.++.......   .....+....      ....+
T Consensus       153 ----------~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~---~~~~~~~~~~------~~~~~  213 (247)
T PRK05565        153 ----------VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE---EDKEGLAEEI------PLGRL  213 (247)
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh---HHHHHHHhcC------CCCCC
Confidence                      26999999888887776644   48999999999997765432111   1111111110      12346


Q ss_pred             eeHHHHHHHHHHhhcCCC--CCceE
Q 020110          229 VPVKDVAKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~--~~g~~  251 (331)
                      ...+|+++++..++....  ..|.+
T Consensus       214 ~~~~~va~~~~~l~~~~~~~~~g~~  238 (247)
T PRK05565        214 GKPEEIAKVVLFLASDDASYITGQI  238 (247)
T ss_pred             CCHHHHHHHHHHHcCCccCCccCcE
Confidence            789999999998886543  34544

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.3e-19  Score=152.20  Aligned_cols=220  Identities=15%  Similarity=0.162  Sum_probs=150.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .+.++||||||+|+||.+++++|++.|+ +|++++|+......+.+ +..... ++.++++|+.+.+++..+++      
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGG-KAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3457999999999999999999999999 99999987543322221 111112 57889999999988876654      


Q ss_pred             -CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 -~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                       .+|++||+|+....     ....++....+++|+.++..+++++    ++.+.+++|++||.....+.++.        
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  155 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQ--------  155 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCC--------
Confidence             47999999985421     1222334568899999998887766    44456789999987554332221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                  ..|+.+|...+.+++.++++   .|++++.+.||.+..+....... ............+      ..
T Consensus       156 ------------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~------~~  216 (252)
T PRK07035        156 ------------GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFK-NDAILKQALAHIP------LR  216 (252)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccC-CHHHHHHHHccCC------CC
Confidence                        37999999999999988755   37999999999997765322111 1111112211111      23


Q ss_pred             CceeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 020110          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~~--~~g~-~~~~~  255 (331)
                      .+...+|+|+++..++....  ..|. +.+.+
T Consensus       217 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dg  248 (252)
T PRK07035        217 RHAEPSEMAGAVLYLASDASSYTTGECLNVDG  248 (252)
T ss_pred             CcCCHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence            35678999999999887543  3453 34443

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.8e-19  Score=154.62  Aligned_cols=196  Identities=19%  Similarity=0.103  Sum_probs=141.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +++||||||||.||++++++|+++|+ +|++.+|++...........    .+.++.+|++|++++.++++       ++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999 99999887654433322111    47789999999988766553       47


Q ss_pred             cEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |++||+||.......    .+.....+++|+.++.++.+++    ++.+.+++|++||..+..+.++.            
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  147 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGM------------  147 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCC------------
Confidence            999999997543221    2234667899999888877765    34566789999997554332221            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                              ..|+.+|...+.+.+.++.   ..|+++++++|+.+-++.....               .   +.....++.
T Consensus       148 --------~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~---------------~---~~~~~~~~~  201 (273)
T PRK07825        148 --------ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT---------------G---GAKGFKNVE  201 (273)
T ss_pred             --------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc---------------c---cccCCCCCC
Confidence                    3799999988877666553   3589999999998866532110               0   011235789


Q ss_pred             HHHHHHHHHHhhcCCCC
Q 020110          231 VKDVAKAQVLLFESPAA  247 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~~  247 (331)
                      ++|+|++++.++.++..
T Consensus       202 ~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        202 PEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999987543

>PRK08643 acetoin reductase; Validated

Probab=99.85  E-value=1.8e-19  Score=153.19  Aligned_cols=217  Identities=18%  Similarity=0.164  Sum_probs=146.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +|++|||||+|+||++++++|+++|+ +|++++|+..............+.++.++++|+++++++.++++       ++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 99999987644322221111111267889999999988777664       47


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      |+|||+|+......    ..+.....+++|+.++..+++++...    + ..++|++||....++.++.           
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  149 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPEL-----------  149 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCC-----------
Confidence            99999998754321    12234667899999988777766432    2 3589999997665543321           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC-------hhHHHHHHHHcCCCCccC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-------ASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~  222 (331)
                               ..|+.+|...+.+.+.++.+   .|++++.++|+.+.++.......       ....+........ .   
T Consensus       150 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---  216 (256)
T PRK08643        150 ---------AVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD-I---  216 (256)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc-C---
Confidence                     37999999999888887754   57999999999998875321000       0000000000000 0   


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                       ....+...+|+|.++..++...  ...|..
T Consensus       217 -~~~~~~~~~~va~~~~~L~~~~~~~~~G~~  246 (256)
T PRK08643        217 -TLGRLSEPEDVANCVSFLAGPDSDYITGQT  246 (256)
T ss_pred             -CCCCCcCHHHHHHHHHHHhCccccCccCcE
Confidence             1223568899999999888654  345644

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.85  E-value=8.6e-20  Score=153.52  Aligned_cols=213  Identities=20%  Similarity=0.142  Sum_probs=148.3

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chh-hcCCCCCCCcEEEEEccCCCchHHHHHhc-------Ccc
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   82 (331)
                      |||||++|+||++++++|+++|+ +|++++|+.... ... ...... +.++.++.+|++|++++.++++       .+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGA-KVIITYRSSEEGAEEVVEELKAY-GVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999 999998865221 111 111111 1257899999999998877764       369


Q ss_pred             EEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           83 GVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        83 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +|||+++.....    ...+.+...+++|+.++.++++++..    .+.++||++||...+++.+..             
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~-------------  145 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQ-------------  145 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCC-------------
Confidence            999999975431    12234577889999999999998864    355689999997666654332             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                             ..|+.+|...+.+.+.++++   .|++++++||+.+.++.....   .......+....+      ...+.++
T Consensus       146 -------~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~---~~~~~~~~~~~~~------~~~~~~~  209 (239)
T TIGR01830       146 -------ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKL---SEKVKKKILSQIP------LGRFGTP  209 (239)
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhc---ChHHHHHHHhcCC------cCCCcCH
Confidence                   37999999999888877654   589999999998876643221   1112222222211      2336789


Q ss_pred             HHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          232 KDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       232 ~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      +|+++++..++....  ..| .|++.+
T Consensus       210 ~~~a~~~~~~~~~~~~~~~g~~~~~~~  236 (239)
T TIGR01830       210 EEVANAVAFLASDEASYITGQVIHVDG  236 (239)
T ss_pred             HHHHHHHHHHhCcccCCcCCCEEEeCC
Confidence            999999998885532  345 456654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.3e-19  Score=153.95  Aligned_cols=210  Identities=17%  Similarity=0.165  Sum_probs=144.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .++|+++||||+|.||.+++++|.+.|+ +|++++|++.+...+.. +..... ++.++.+|+++++++.++++      
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGG-EAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            3457999999999999999999999999 99999997654433322 111122 68889999999988887765      


Q ss_pred             -CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceec-cCCCCCCccccC
Q 020110           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIV-PNPGWKGKVFDE  148 (331)
Q Consensus        80 -~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~-~~~~~~~~~~~E  148 (331)
                       .+|++||+|+....     ....++....+++|+.++..+.+++    ++.+.+++|++||..++. +.++        
T Consensus        82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~--------  153 (254)
T PRK07478         82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPG--------  153 (254)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCC--------
Confidence             57999999997432     1122335778999998888776654    444567899999864421 1111        


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                  ...|+.+|...+.+.+.++.+.   |+++++++||.+-.+..... ..... ........ .    ..
T Consensus       154 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~-~~~~~~~~-~----~~  214 (254)
T PRK07478        154 ------------MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAM-GDTPE-ALAFVAGL-H----AL  214 (254)
T ss_pred             ------------cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccc-cCCHH-HHHHHHhc-C----CC
Confidence                        1379999999999998887654   79999999999987743211 00111 11111110 0    12


Q ss_pred             CCceeHHHHHHHHHHhhcCC
Q 020110          226 LGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~  245 (331)
                      ..+..++|+|+++++++...
T Consensus       215 ~~~~~~~~va~~~~~l~s~~  234 (254)
T PRK07478        215 KRMAQPEEIAQAALFLASDA  234 (254)
T ss_pred             CCCcCHHHHHHHHHHHcCch
Confidence            33568999999999988654

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.6e-19  Score=153.21  Aligned_cols=220  Identities=18%  Similarity=0.113  Sum_probs=150.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +.|+|+||||+|+||++++++|+++|+ +|+++.|+......... +..... ++.++.+|+++.+++..+++       
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGG-EALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            457999999999999999999999999 99999997654322221 111122 68899999999988877665       


Q ss_pred             CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .+|+|||+|+....     +...+++...+++|+.++..+++++    .+.+..++|++||..++.+.++.         
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~---------  154 (253)
T PRK06172         84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKM---------  154 (253)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCC---------
Confidence            46999999986432     1123345677889999998776654    33455689999997554432221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+.   ++++.+++||.+-.+....................      ....
T Consensus       155 -----------~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~  217 (253)
T PRK06172        155 -----------SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMH------PVGR  217 (253)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccC------CCCC
Confidence                       379999999999998887664   79999999999977653221110111111111111      1123


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          228 AVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      +...+|+++.+.+++...  ...|.+ .+.+
T Consensus       218 ~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dg  248 (253)
T PRK06172        218 IGKVEEVASAVLYLCSDGASFTTGHALMVDG  248 (253)
T ss_pred             ccCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            568899999999988754  345644 3433

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.3e-19  Score=148.28  Aligned_cols=208  Identities=18%  Similarity=0.150  Sum_probs=144.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------Ccc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d   82 (331)
                      .|+||||||+|+||++++++|+++|+ +|+++.|+....     .      ..+++.+|+++.+++.++++      ++|
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   70 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----F------PGELFACDLADIEQTAATLAQINEIHPVD   70 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----c------CceEEEeeCCCHHHHHHHHHHHHHhCCCc
Confidence            46899999999999999999999999 999999876541     1      23578899999988877665      579


Q ss_pred             EEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           83 GVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        83 ~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +|||+|+......    ..++....+++|+.++.++.+++    ++.+.+++|++||.. .++.+..             
T Consensus        71 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~-------------  136 (234)
T PRK07577         71 AIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDR-------------  136 (234)
T ss_pred             EEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCc-------------
Confidence            9999999755422    12334567889999988877665    345677999999973 3332221             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                             ..|+.+|...+.+.+.++.+   ++++++++||+.+.++....................+      .......
T Consensus       137 -------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  203 (234)
T PRK07577        137 -------TSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP------MRRLGTP  203 (234)
T ss_pred             -------hHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC------CCCCcCH
Confidence                   37999999999888876643   4899999999999887532111101111112211111      1224578


Q ss_pred             HHHHHHHHHhhcCCC--CCce-EEEec
Q 020110          232 KDVAKAQVLLFESPA--ASGR-YLCTN  255 (331)
Q Consensus       232 ~D~a~a~~~~l~~~~--~~g~-~~~~~  255 (331)
                      +|+|.+++.++..+.  ..|. +.+.+
T Consensus       204 ~~~a~~~~~l~~~~~~~~~g~~~~~~g  230 (234)
T PRK07577        204 EEVAAAIAFLLSDDAGFITGQVLGVDG  230 (234)
T ss_pred             HHHHHHHHHHhCcccCCccceEEEecC
Confidence            999999999987643  3454 34443

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.85  E-value=1.3e-20  Score=157.90  Aligned_cols=218  Identities=26%  Similarity=0.335  Sum_probs=149.9

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc--cchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+|+||||.+|+++++.|++.++ +|.++.|+...  ...+...      +++++.+|+.|++++.++++++|+||.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~------g~~vv~~d~~~~~~l~~al~g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQAL------GAEVVEADYDDPESLVAALKGVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHT------TTEEEES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcc------cceEeecccCCHHHHHHHHcCCceEEeecC
Confidence            79999999999999999999999 99999998743  2233333      678999999999999999999999998876


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (331)
                      ....            .-.....+++++|++.|+++||+ ||....+.          +.....|..      +....|.
T Consensus        74 ~~~~------------~~~~~~~~li~Aa~~agVk~~v~-ss~~~~~~----------~~~~~~p~~------~~~~~k~  124 (233)
T PF05368_consen   74 PSHP------------SELEQQKNLIDAAKAAGVKHFVP-SSFGADYD----------ESSGSEPEI------PHFDQKA  124 (233)
T ss_dssp             CSCC------------CHHHHHHHHHHHHHHHT-SEEEE-SEESSGTT----------TTTTSTTHH------HHHHHHH
T ss_pred             cchh------------hhhhhhhhHHHhhhccccceEEE-EEeccccc----------ccccccccc------hhhhhhh
Confidence            5321            11334668999999999999997 65423221          111111111      4455788


Q ss_pred             HHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCC-CCc---cCcCCCCce-eHHHHHHHHHHhhcC
Q 020110          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDT---QEYHWLGAV-PVKDVAKAQVLLFES  244 (331)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~v-~v~D~a~a~~~~l~~  244 (331)
                      ..|+.++    +.+++++++|++.++.......   .  ......... ...   .++....++ ..+|+++++..++..
T Consensus       125 ~ie~~l~----~~~i~~t~i~~g~f~e~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~  195 (233)
T PF05368_consen  125 EIEEYLR----ESGIPYTIIRPGFFMENLLPPF---A--PVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLD  195 (233)
T ss_dssp             HHHHHHH----HCTSEBEEEEE-EEHHHHHTTT---H--HTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHS
T ss_pred             hhhhhhh----hccccceeccccchhhhhhhhh---c--ccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcC
Confidence            8887776    6699999999998775532211   0  000011111 111   223345564 999999999999998


Q ss_pred             CCCC--ce-EEEeccccCHHHHHHHHHHhCCCCC
Q 020110          245 PAAS--GR-YLCTNGIYQFGDFAERVSKLFPEFP  275 (331)
Q Consensus       245 ~~~~--g~-~~~~~~~~s~~e~~~~i~~~~~~~~  275 (331)
                      +...  +. +.++++.+|..|+++.+.+.+ +.+
T Consensus       196 p~~~~~~~~~~~~~~~~t~~eia~~~s~~~-G~~  228 (233)
T PF05368_consen  196 PEKHNNGKTIFLAGETLTYNEIAAILSKVL-GKK  228 (233)
T ss_dssp             GGGTTEEEEEEEGGGEEEHHHHHHHHHHHH-TSE
T ss_pred             hHHhcCCEEEEeCCCCCCHHHHHHHHHHHH-CCc
Confidence            7654  33 466778899999999999998 443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.85  E-value=1.5e-19  Score=153.79  Aligned_cols=210  Identities=14%  Similarity=0.069  Sum_probs=145.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|+||||||+|+||.+++++|++.|+ +|+++.|+. ....+.+.....+.++.++.+|+++.+++.++++       
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG   90 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999 999998873 2222221111111268899999999998887775       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      .+|++||+|+.....    ...++....+++|+.++..+.+++.    +.+.+++|++||...+.+.+..          
T Consensus        91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  160 (258)
T PRK06935         91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFV----------  160 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCc----------
Confidence            579999999875431    1223346778999999888877654    3456789999997554332221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++++   .|+++++++||.+..+....... ...........  .    ....+
T Consensus       161 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~--~----~~~~~  223 (258)
T PRK06935        161 ----------PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA-DKNRNDEILKR--I----PAGRW  223 (258)
T ss_pred             ----------hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc-ChHHHHHHHhc--C----CCCCC
Confidence                      27999999999999988765   47999999999998875321100 00111111111  1    12347


Q ss_pred             eeHHHHHHHHHHhhcCC
Q 020110          229 VPVKDVAKAQVLLFESP  245 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~  245 (331)
                      ...+|++..+.+++...
T Consensus       224 ~~~~dva~~~~~l~s~~  240 (258)
T PRK06935        224 GEPDDLMGAAVFLASRA  240 (258)
T ss_pred             CCHHHHHHHHHHHcChh
Confidence            88899999999888643

>PRK08589 short chain dehydrogenase; Validated

Probab=99.84  E-value=2.5e-19  Score=153.65  Aligned_cols=222  Identities=19%  Similarity=0.169  Sum_probs=146.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch-hhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|+++.|+ ..... ..++..... ++.++.+|+++++++.++++       
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~-~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA-EAVSETVDKIKSNGG-KAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc-HHHHHHHHHHHhcCC-eEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999 99999987 33222 222211122 68899999999988876664       


Q ss_pred             CccEEEEcccCCCC-CC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTL-ED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .+|++||+||.... ..    ..+.....+++|+.++..+++++.    +.+ .++|++||.....+.+..         
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~---------  151 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYR---------  151 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCC---------
Confidence            47999999997532 11    122346678899998887777653    334 689999997554332221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhH-HHHHHHHcCCCCccCcCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASC-AVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  226 (331)
                                 ..|+.+|...+.+.+.++.+   .|++++.+.||.+..+.......... ..............  ...
T Consensus       152 -----------~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  218 (272)
T PRK08589        152 -----------SGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT--PLG  218 (272)
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC--CCC
Confidence                       37999999999999988755   47999999999998775321100000 00000000000000  122


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      .+..++|++++++.++...  ...|.. .+.+
T Consensus       219 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdg  250 (272)
T PRK08589        219 RLGKPEEVAKLVVFLASDDSSFITGETIRIDG  250 (272)
T ss_pred             CCcCHHHHHHHHHHHcCchhcCcCCCEEEECC
Confidence            3578999999999988643  335543 3433

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.2e-19  Score=153.08  Aligned_cols=197  Identities=15%  Similarity=0.099  Sum_probs=143.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc----CccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----GCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~   83 (331)
                      ||+|+||||+|+||.+++++|+++|+ +|++++|+........+ .......++.++++|+++++++.++++    ++|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence            57999999999999999999999999 99999998654332211 111111278899999999998887765    3699


Q ss_pred             EEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           84 VFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        84 vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      |||+++......    ..++....+++|+.++.++++++..    .+.+++|++||..+..+.++.              
T Consensus        80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------------  145 (243)
T PRK07102         80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASN--------------  145 (243)
T ss_pred             EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCC--------------
Confidence            999998654321    1222346789999999999887654    356789999987543322211              


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHH
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  232 (331)
                            ..|+.+|...+.+.+.++.   ..|+++++++|+.+.++.....               .  .+  ....+.++
T Consensus       146 ------~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~---------------~--~~--~~~~~~~~  200 (243)
T PRK07102        146 ------YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL---------------K--LP--GPLTAQPE  200 (243)
T ss_pred             ------cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc---------------C--CC--ccccCCHH
Confidence                  3799999999998888754   4589999999999988742210               0  00  12246789


Q ss_pred             HHHHHHHHhhcCC
Q 020110          233 DVAKAQVLLFESP  245 (331)
Q Consensus       233 D~a~a~~~~l~~~  245 (331)
                      |+++.+..++..+
T Consensus       201 ~~a~~i~~~~~~~  213 (243)
T PRK07102        201 EVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999988854

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.4e-19  Score=152.84  Aligned_cols=218  Identities=20%  Similarity=0.129  Sum_probs=148.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCC--CCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA--GDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .+.|+++||||+|+||++++++|+++|+ +|++++|+.............  .+.++.++.+|++|++++.++++     
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3467999999999999999999999999 999999876543332211110  11168899999999988887765     


Q ss_pred             --CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 --~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                        .+|++||+||.....    ...++....+++|+.++..+++++..    .+..++|++||.....+.++.        
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  155 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGC--------  155 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCc--------
Confidence              589999999964321    12234567789999999998887643    345689999997543322211        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCC--hhHH-HHHHHHcCCCCccCc
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN--ASCA-VLQQLLQGSKDTQEY  223 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~--~~~~-~~~~~~~~~~~~~~~  223 (331)
                                  ..|+.+|...+.+.+.++++.   |++++.++||.+-.+.......  .... .........      
T Consensus       156 ------------~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------  217 (260)
T PRK07063        156 ------------FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQ------  217 (260)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcC------
Confidence                        279999999999998887654   7999999999987764321100  0000 111111111      


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCC--CCceE
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~--~~g~~  251 (331)
                      ....+...+|+|.++++++....  ..|..
T Consensus       218 ~~~r~~~~~~va~~~~fl~s~~~~~itG~~  247 (260)
T PRK07063        218 PMKRIGRPEEVAMTAVFLASDEAPFINATC  247 (260)
T ss_pred             CCCCCCCHHHHHHHHHHHcCccccccCCcE
Confidence            11235678999999999886542  45643

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4e-19  Score=150.87  Aligned_cols=214  Identities=17%  Similarity=0.165  Sum_probs=147.0

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chh-hcCCCCCCCcEEEEEccCCCchHHHHHhc--
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHL-FALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   79 (331)
                      |.+.+.|++|||||+|+||++++++|+++|+ +|++++|+.... ... ..+..... ++.++.+|++|++++.++++  
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~   80 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGR-RAIQIAADVTSKADLRAAVART   80 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHH
Confidence            4444568999999999999999999999999 999998865321 111 11111112 67889999999988887665  


Q ss_pred             -----CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccc
Q 020110           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 -----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                           .+|++||+||.....    ...++....+++|+.++..+++++.    +.+.+++|++||.....+.+..     
T Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----  155 (254)
T PRK06114         81 EAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL-----  155 (254)
T ss_pred             HHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC-----
Confidence                 369999999975431    1233457778999999988777653    3455689999997654433221     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                   ....|+.+|...+.+.+.++.+   .|+++.+++||.+.++..... . ............+     
T Consensus       156 -------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~-~~~~~~~~~~~~p-----  215 (254)
T PRK06114        156 -------------LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-E-MVHQTKLFEEQTP-----  215 (254)
T ss_pred             -------------CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-c-chHHHHHHHhcCC-----
Confidence                         0137999999999988888754   589999999999988764211 1 1111111111111     


Q ss_pred             CCCCceeHHHHHHHHHHhhcCC
Q 020110          224 HWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                       ...+..++|++.++++++...
T Consensus       216 -~~r~~~~~dva~~~~~l~s~~  236 (254)
T PRK06114        216 -MQRMAKVDEMVGPAVFLLSDA  236 (254)
T ss_pred             -CCCCcCHHHHHHHHHHHcCcc
Confidence             123567899999999988643

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.8e-19  Score=156.60  Aligned_cols=208  Identities=18%  Similarity=0.094  Sum_probs=146.2

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ....++||||||+|.||++++++|.++|+ +|+++.|+......+.......+.++.++.+|++|++++.++++      
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            34467999999999999999999999999 99999997654333222111111267888999999998887763      


Q ss_pred             -CccEEEEcccCCCCCCCC----CchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       .+|++||+||........    +.....+++|+.++.++.+++    ++.+..++|++||..++.+.+..         
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~---------  153 (330)
T PRK06139         83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYA---------  153 (330)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCc---------
Confidence             579999999975442222    334567999999999887775    33445689999987554332221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                 ..|+.+|...+.+.+.++.+    .+++++.+.|+.+.+|........         .+...   ....
T Consensus       154 -----------~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~---------~~~~~---~~~~  210 (330)
T PRK06139        154 -----------AAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY---------TGRRL---TPPP  210 (330)
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc---------ccccc---cCCC
Confidence                       37999999877777666544    379999999999988864321110         01000   0123


Q ss_pred             CceeHHHHHHHHHHhhcCCC
Q 020110          227 GAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~~  246 (331)
                      .++..+|+|++++.++.++.
T Consensus       211 ~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        211 PVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             CCCCHHHHHHHHHHHHhCCC
Confidence            46789999999999997654

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.5e-19  Score=150.40  Aligned_cols=216  Identities=22%  Similarity=0.253  Sum_probs=147.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chh-hcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .++||||||+|+||++++++|+++|+ +|+++.|+.... ..+ .++..... ++.++.+|+++.+++.++++       
T Consensus         5 ~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          5 NKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGG-RAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47999999999999999999999999 888776654321 111 11111112 78899999999988887775       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      ++|+|||+|+.....    ...++....+++|+.++.++++++...  ..+++|++||.....+.+.             
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-------------  149 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPG-------------  149 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCC-------------
Confidence            589999999975421    122334667889999999999887654  2358999998644322211             


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                             ...|+.+|...+.+++.++.+   .++++++++|+.+.++......  ....+..+....+      ...+.+
T Consensus       150 -------~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~------~~~~~~  214 (245)
T PRK12937        150 -------YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGK--SAEQIDQLAGLAP------LERLGT  214 (245)
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccC--CHHHHHHHHhcCC------CCCCCC
Confidence                   137999999999999887655   4799999999988776521111  1122333332221      223567


Q ss_pred             HHHHHHHHHHhhcCCC--CCceE-EEe
Q 020110          231 VKDVAKAQVLLFESPA--ASGRY-LCT  254 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~--~~g~~-~~~  254 (331)
                      ++|+++++..++....  ..|.+ ++.
T Consensus       215 ~~d~a~~~~~l~~~~~~~~~g~~~~~~  241 (245)
T PRK12937        215 PEEIAAAVAFLAGPDGAWVNGQVLRVN  241 (245)
T ss_pred             HHHHHHHHHHHcCccccCccccEEEeC
Confidence            8999999998886543  34543 444

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.5e-19  Score=151.63  Aligned_cols=216  Identities=18%  Similarity=0.139  Sum_probs=149.6

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC-CCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      ..+.|+|+||||+|+||++++++|+++|+ +|+++.|+....+.+... ..... ++.++.+|+++++++.++++     
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   83 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGG-AAHVVSLDVTDYQSIKAAVAHAETE   83 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHh
Confidence            34458999999999999999999999999 999999976543332221 11112 68899999999988887765     


Q ss_pred             --CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----C--------CCEEEEeCccceeccCCCC
Q 020110           80 --GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----G--------VRRVVVTSSISAIVPNPGW  141 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~--------~~~~v~~SS~~~~~~~~~~  141 (331)
                        .+|+|||+|+......    ..+++...+++|+.++.++++++...    .        ..++|++||.....+.+. 
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-  162 (258)
T PRK06949         84 AGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ-  162 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCC-
Confidence              4799999999654321    22345677899999999998876421    1        258999998744322111 


Q ss_pred             CCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCC
Q 020110          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (331)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (331)
                                         ...|+.+|...+.+++.++.+   .++++++++||.++++.......  ......+. . .
T Consensus       163 -------------------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~-~-~  219 (258)
T PRK06949        163 -------------------IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE--TEQGQKLV-S-M  219 (258)
T ss_pred             -------------------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC--hHHHHHHH-h-c
Confidence                               137999999999999887755   48999999999999986432111  11111111 1 0


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCCC--CCceE
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~  251 (331)
                      +    ....+...+|++.++.+++....  ..|.+
T Consensus       220 ~----~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~  250 (258)
T PRK06949        220 L----PRKRVGKPEDLDGLLLLLAADESQFINGAI  250 (258)
T ss_pred             C----CCCCCcCHHHHHHHHHHHhChhhcCCCCcE
Confidence            1    12346667999999999887432  45654

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.9e-19  Score=151.27  Aligned_cols=198  Identities=20%  Similarity=0.161  Sum_probs=141.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +++|+||||+|+||++++++|++.|+ +|++++|++.............. ++.++.+|+.+.+++.+.++       ++
T Consensus         6 ~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          6 GKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKG-NVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccC-cEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 99999997654333222111112 78899999999988877665       58


Q ss_pred             cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        82 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      |+|||+++.....    ...++....+++|+.++.++++++...   +.+++|++||.....+...              
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------  149 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAG--------------  149 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCC--------------
Confidence            9999999865432    122234567899999999998887542   4568999998744322111              


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                            ...|+.+|...+.+.+.++.   ..|++++++||+.+.++..... ..           .      .....+..
T Consensus       150 ------~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-~~-----------~------~~~~~~~~  205 (237)
T PRK07326        150 ------GAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-PS-----------E------KDAWKIQP  205 (237)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-cc-----------h------hhhccCCH
Confidence                  13699999998888877653   3589999999999877643211 00           0      00113788


Q ss_pred             HHHHHHHHHhhcCCC
Q 020110          232 KDVAKAQVLLFESPA  246 (331)
Q Consensus       232 ~D~a~a~~~~l~~~~  246 (331)
                      +|++++++.++..+.
T Consensus       206 ~d~a~~~~~~l~~~~  220 (237)
T PRK07326        206 EDIAQLVLDLLKMPP  220 (237)
T ss_pred             HHHHHHHHHHHhCCc
Confidence            999999999998764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.84  E-value=5.4e-19  Score=150.18  Aligned_cols=219  Identities=17%  Similarity=0.185  Sum_probs=151.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|+||||||+|+||++++++|.+.|+ +|++++|+......+.. +..... ++.++.+|+++.+++.++++       
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999 99988886544322211 111112 67888999999988876654       


Q ss_pred             CccEEEEcccCCCCCC---CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHVASPCTLED---PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      .+|++||+|+......   ..+.....+++|+.++.++++++..    .+..++|++||.....+.+.            
T Consensus        88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------  155 (255)
T PRK06113         88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN------------  155 (255)
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC------------
Confidence            4799999999754321   1233456689999999999998853    34458999999754322211            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                              ...|+.+|...+.+++.++.+   .+++++++.|+.+..+......  ......+.....+      ...+.
T Consensus       156 --------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~------~~~~~  219 (255)
T PRK06113        156 --------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTP------IRRLG  219 (255)
T ss_pred             --------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccccc--CHHHHHHHHhcCC------CCCCc
Confidence                    137999999999999888754   4799999999999877533211  1122222222211      23467


Q ss_pred             eHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          230 PVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      .++|+++++++++....  ..| .+++.++
T Consensus       220 ~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        220 QPQDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_pred             CHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            89999999999886532  245 3455443

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.84  E-value=3.9e-19  Score=151.93  Aligned_cols=215  Identities=15%  Similarity=0.065  Sum_probs=149.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +|++|||||+|+||.+++++|+++|+ +|+++.|+..............+.++.++.+|++++++++++++       .+
T Consensus        10 ~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097         10 GKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            47899999999999999999999999 99998887654332221111111268889999999998887774       37


Q ss_pred             cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+||.....    ...+.....+++|+.++..+++++..    .+.+++|++||....++.+..            
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  156 (265)
T PRK07097         89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETV------------  156 (265)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCC------------
Confidence            9999999976532    22334467788999998888777643    456789999997554432221            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCC-----hhHHHHHHHHcCCCCccCcCC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN-----ASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  225 (331)
                              ..|+.+|...+.+.+.++++.   |++++.++||.+.++...+...     ....+...+....      ..
T Consensus       157 --------~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  222 (265)
T PRK07097        157 --------SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKT------PA  222 (265)
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcC------Cc
Confidence                    379999999999999887664   8999999999999885422100     0000001111111      12


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCce
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGR  250 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~  250 (331)
                      ..+...+|+|..+..++...  ...|.
T Consensus       223 ~~~~~~~dva~~~~~l~~~~~~~~~g~  249 (265)
T PRK07097        223 ARWGDPEDLAGPAVFLASDASNFVNGH  249 (265)
T ss_pred             cCCcCHHHHHHHHHHHhCcccCCCCCC
Confidence            23677899999999998763  33553

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=5e-19  Score=150.22  Aligned_cols=215  Identities=17%  Similarity=0.150  Sum_probs=145.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC-CccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------   80 (331)
                      .|++|||||+|+||+++++.|+++|+ +|+...++. .....+....  .. ++.++.+|+.+++++.+++++       
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADEL--GD-RAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHh--CC-ceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999 888765533 2222221111  11 688899999999888777642       


Q ss_pred             -ccEEEEcccCCCC----------CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCcc
Q 020110           81 -CKGVFHVASPCTL----------EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        81 -~d~vih~a~~~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                       +|++||+|+....          +...++....+++|+.++.++++++.    ..+..++|++||....  .+.     
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~--~~~-----  153 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ--NPV-----  153 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc--CCC-----
Confidence             8999999975321          11123345679999999999999875    3345689999985221  110     


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccC
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (331)
                             .      +...|+.+|...+.+++.++++   .++++..++||.+..+......  .......+....     
T Consensus       154 -------~------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~--~~~~~~~~~~~~-----  213 (253)
T PRK08642        154 -------V------PYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT--PDEVFDLIAATT-----  213 (253)
T ss_pred             -------C------CccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC--CHHHHHHHHhcC-----
Confidence                   0      1137999999999999998866   4799999999999776422111  111111121111     


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEec
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTN  255 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~  255 (331)
                       ....+.+.+|+++++..++...  ...| .+.+.+
T Consensus       214 -~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdg  248 (253)
T PRK08642        214 -PLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDG  248 (253)
T ss_pred             -CcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence             1245789999999999998743  3455 344443

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.84  E-value=6.7e-19  Score=149.36  Aligned_cols=208  Identities=15%  Similarity=0.152  Sum_probs=140.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEe-cCCCccchh-hcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +|+++||||+|+||++++++|.++|+ +|++.. |+....... .++..... .+..+.+|+++.+++..+++       
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            47999999999999999999999999 888764 332222111 11111112 57788899999876654331       


Q ss_pred             ------CccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ------GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ------~~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                            .+|++||+||.......    .+.....+++|+.++..+++++...  +..++|++||.....+.++.      
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  155 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF------  155 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCc------
Confidence                  58999999996533211    2224667889999999999877543  23589999997554322211      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                    ..|+.+|...+.+.+.++.+   .|++++++.|+.+.++....... . ..........     ..
T Consensus       156 --------------~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~-~-~~~~~~~~~~-----~~  214 (252)
T PRK12747        156 --------------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS-D-PMMKQYATTI-----SA  214 (252)
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc-C-HHHHHHHHhc-----Cc
Confidence                          37999999999999888755   48999999999999885322111 0 0111111100     01


Q ss_pred             CCCceeHHHHHHHHHHhhcCC
Q 020110          225 WLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      ...+.+++|+|+++.+++...
T Consensus       215 ~~~~~~~~dva~~~~~l~s~~  235 (252)
T PRK12747        215 FNRLGEVEDIADTAAFLASPD  235 (252)
T ss_pred             ccCCCCHHHHHHHHHHHcCcc
Confidence            235788999999999887643

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.1e-19  Score=150.36  Aligned_cols=215  Identities=18%  Similarity=0.134  Sum_probs=150.1

Q ss_pred             EEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC---ccEEEEccc
Q 020110           13 CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---CKGVFHVAS   89 (331)
Q Consensus        13 lVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~vih~a~   89 (331)
                      |||||+|+||++++++|+++|+ +|+++.|+............... +++++.+|+++++++.++++.   +|++||+++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGA-RVTIASRSRDRLAAAARALGGGA-PVRTAALDITDEAAVDAFFAEAGPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            6999999999999999999999 99999987544332221111112 688999999999999888864   799999998


Q ss_pred             CCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           90 PCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        90 ~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      .....    ...++....+++|+.++.+++++....+.+++|++||..++.+.+..                    ..|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~--------------------~~Y~  138 (230)
T PRK07041         79 DTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASG--------------------VLQG  138 (230)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcc--------------------hHHH
Confidence            75432    12334577899999999999996665566799999997554332221                    3799


Q ss_pred             HHHHHHHHHHHHHHHHc-CCeEEEEcCCcccCCCCCCCCC-hhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhc
Q 020110          166 VSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE  243 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~  243 (331)
                      .+|...+.+.+.++.+. +++++.++|+.+.++....... .....+.......+      ...+...+|+|+++..++.
T Consensus       139 ~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~  212 (230)
T PRK07041        139 AINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP------ARRVGQPEDVANAILFLAA  212 (230)
T ss_pred             HHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhc
Confidence            99999999998887653 6899999999887664221000 00111222222111      1124578999999999998


Q ss_pred             CCCCCc-eEEEec
Q 020110          244 SPAASG-RYLCTN  255 (331)
Q Consensus       244 ~~~~~g-~~~~~~  255 (331)
                      .....| .|++.+
T Consensus       213 ~~~~~G~~~~v~g  225 (230)
T PRK07041        213 NGFTTGSTVLVDG  225 (230)
T ss_pred             CCCcCCcEEEeCC
Confidence            765556 566554

>PRK12743 oxidoreductase; Provisional

Probab=99.84  E-value=3.5e-19  Score=151.42  Aligned_cols=217  Identities=18%  Similarity=0.190  Sum_probs=147.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +++||||||+|+||++++++|+++|+ +|+++.|+... ...........+.++.++.+|++++++++++++       .
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 99887654322 211111100111268899999999988877664       4


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|+|||+|+......    ..+.....+++|+.++.++++++...    + -+++|++||.....+.++           
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~-----------  149 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPG-----------  149 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCC-----------
Confidence            799999998755321    22345778999999999999887543    1 258999998644322111           


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                               ...|+.+|...+.+++.++.+   .+++++.++||.+.++..... .  .........+.+      ...+
T Consensus       150 ---------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~--~~~~~~~~~~~~------~~~~  211 (256)
T PRK12743        150 ---------ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-D--SDVKPDSRPGIP------LGRP  211 (256)
T ss_pred             ---------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-C--hHHHHHHHhcCC------CCCC
Confidence                     137999999999998887754   479999999999998864321 1  111111111111      1234


Q ss_pred             eeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 020110          229 VPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~--~~g~~-~~~~  255 (331)
                      .+.+|++.++..++....  ..|.+ .+.+
T Consensus       212 ~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  241 (256)
T PRK12743        212 GDTHEIASLVAWLCSEGASYTTGQSLIVDG  241 (256)
T ss_pred             CCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            688999999988886543  35644 4444

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=2.8e-19  Score=151.74  Aligned_cols=216  Identities=17%  Similarity=0.149  Sum_probs=148.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      .+++|||||+|+||+.+++.|+++|+ +|++++|+..............+.++.++.+|+++.+++.++++       .+
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46999999999999999999999999 99999987643322211111111267889999999888766554       36


Q ss_pred             cEEEEcccCCCCC-------------CCCCchhhhhHHHHHHHHHHHHHHH----hC-CCCEEEEeCccceeccCCCCCC
Q 020110           82 KGVFHVASPCTLE-------------DPVDPEKELILPAVQGTLNVLEAAK----RF-GVRRVVVTSSISAIVPNPGWKG  143 (331)
Q Consensus        82 d~vih~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~v~~SS~~~~~~~~~~~~  143 (331)
                      |+|||+|+.....             ...+.....+++|+.++..+.+++.    +. .-.++|++||. ..++.+..  
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~-~~~~~~~~--  160 (253)
T PRK08217         84 NGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI-ARAGNMGQ--  160 (253)
T ss_pred             CEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc-cccCCCCC--
Confidence            9999999864321             1112335678899999987776543    22 22468898886 33332221  


Q ss_pred             ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc
Q 020110          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (331)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (331)
                                        ..|+.+|...+.+++.++++   .+++++.++|+.+.++.....   ............+  
T Consensus       161 ------------------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~~--  217 (253)
T PRK08217        161 ------------------TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM---KPEALERLEKMIP--  217 (253)
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc---CHHHHHHHHhcCC--
Confidence                              37999999999998888754   589999999999988864321   1222223322221  


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCCCCCc-eEEEec
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESPAASG-RYLCTN  255 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~~~~g-~~~~~~  255 (331)
                          ...+.+++|+++++..++......| ++++.+
T Consensus       218 ----~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~g  249 (253)
T PRK08217        218 ----VGRLGEPEEIAHTVRFIIENDYVTGRVLEIDG  249 (253)
T ss_pred             ----cCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCC
Confidence                2346789999999999987655566 455544

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.7e-19  Score=150.58  Aligned_cols=197  Identities=21%  Similarity=0.132  Sum_probs=143.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCC-CCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +|+++||||+|+||++++++|+++|+ +|++.+|++.....+.. +... .+.++.++.+|+++++++.++++       
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 99999997654333221 1110 12268899999999988776654       


Q ss_pred             CccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+||.......    .+.....+++|+.++.++++++.    +.+.+++|++||..+.++.+..          
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------  150 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGV----------  150 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCC----------
Confidence            58999999987543221    22235678999999998888764    4467789999997655443210          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                               ...|+.+|...+.+.+.++.+   .++++++++|+.+.++.....             +.       ....
T Consensus       151 ---------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-------------~~-------~~~~  201 (248)
T PRK08251        151 ---------KAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-------------KS-------TPFM  201 (248)
T ss_pred             ---------cccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-------------cc-------CCcc
Confidence                     137999999999888877654   379999999999977643210             00       1235


Q ss_pred             eeHHHHHHHHHHhhcCC
Q 020110          229 VPVKDVAKAQVLLFESP  245 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~  245 (331)
                      +..+|.|++++.+++..
T Consensus       202 ~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        202 VDTETGVKALVKAIEKE  218 (248)
T ss_pred             CCHHHHHHHHHHHHhcC
Confidence            77899999999999754

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.3e-19  Score=150.79  Aligned_cols=207  Identities=17%  Similarity=0.130  Sum_probs=140.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++++|+||||+|+||.+++++|+++|+ +|++++|+...........     ...++.+|+++++++.++++       +
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEV-----GGLFVPTDVTDEDAVNALFDTAAETYGS   79 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc-----CCcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 9999998765433322211     23578899999998887775       4


Q ss_pred             ccEEEEcccCCCCC------CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           81 CKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        81 ~d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      +|+|||+|+.....      ...+.....+++|+.++..+++.+.    +.+..++|++||..+.++....         
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~---------  150 (255)
T PRK06057         80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS---------  150 (255)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC---------
Confidence            79999999865321      1122346778899999988877654    3445689999986554432110         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                ...|+.+|...+.+.+.++.   ..|+++++++||.+.++..............+...    ..+  ...
T Consensus       151 ----------~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~----~~~--~~~  214 (255)
T PRK06057        151 ----------QISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLV----HVP--MGR  214 (255)
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHh----cCC--CCC
Confidence                      12699999877766665443   34899999999999988643211101111111110    011  235


Q ss_pred             ceeHHHHHHHHHHhhcCC
Q 020110          228 AVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~  245 (331)
                      +..++|+++++..++...
T Consensus       215 ~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        215 FAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             CcCHHHHHHHHHHHhCcc
Confidence            789999999998877653

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.7e-19  Score=157.44  Aligned_cols=206  Identities=16%  Similarity=0.052  Sum_probs=142.1

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .++++|+||||+|+||++++++|+++|+ +|+++.|+........+.....+.++.++.+|++|++++.++++       
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            3457999999999999999999999999 99999987644332221111111268899999999998887764       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHH----HHhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      .+|++||+|+.....    ...++....+++|+.+..++.++    +++.+..++|++||..++.+.+..          
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~----------  154 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQ----------  154 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcc----------
Confidence            589999999865321    12233466788887777665554    444456789999997554322211          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH-----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                ..|+.+|...+.+.+.++.+     .++++++++|+.+.+|....        ........    .....
T Consensus       155 ----------~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~--------~~~~~~~~----~~~~~  212 (334)
T PRK07109        155 ----------SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW--------ARSRLPVE----PQPVP  212 (334)
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh--------hhhhcccc----ccCCC
Confidence                      37999999988888776543     36999999999997764211        00100110    01123


Q ss_pred             CceeHHHHHHHHHHhhcCC
Q 020110          227 GAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~  245 (331)
                      .+..++|+|++++.++.++
T Consensus       213 ~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        213 PIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             CCCCHHHHHHHHHHHHhCC
Confidence            4678999999999999865

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.3e-19  Score=152.94  Aligned_cols=198  Identities=14%  Similarity=0.123  Sum_probs=141.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      .++|+||||+|+||++++++|+++|+ +|++++|+......+.+ +..... .+.++.+|++|.+++.++++       +
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGG-DAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999 99999997644332221 111112 67889999999998887776       6


Q ss_pred             ccEEEEcccCCCCCCCC------CchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           81 CKGVFHVASPCTLEDPV------DPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      +|+|||+||........      +.....+++|+.++.++++++.    +.+..++|++||.+.+... .          
T Consensus       118 id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-~----------  186 (293)
T PRK05866        118 VDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA-S----------  186 (293)
T ss_pred             CCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC-C----------
Confidence            89999999876432211      2235678999999888887653    5566799999986332110 0          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                         |     ....|+.+|...+.+.+.++.+   +++++++++||.+-++...+..           ..       ....
T Consensus       187 ---p-----~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~-----------~~-------~~~~  240 (293)
T PRK05866        187 ---P-----LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK-----------AY-------DGLP  240 (293)
T ss_pred             ---C-----CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc-----------cc-------cCCC
Confidence               0     0137999999999988887654   4899999999988766432110           00       0122


Q ss_pred             ceeHHHHHHHHHHhhcCC
Q 020110          228 AVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~  245 (331)
                      .+..+++|+.++.++.+.
T Consensus       241 ~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        241 ALTADEAAEWMVTAARTR  258 (293)
T ss_pred             CCCHHHHHHHHHHHHhcC
Confidence            468899999999999764

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.4e-19  Score=150.88  Aligned_cols=222  Identities=16%  Similarity=0.205  Sum_probs=144.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhc----CCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFA----LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      ++|++|||||+|+||.+++++|+++|+ +|+++.++... ......    +.... .++.++.+|+++++++.++++   
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~-~vv~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   84 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGA-KAVAIHYNSAASKADAEETVAAVKAAG-AKAVAFQADLTTAAAVEKLFDDAK   84 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-cEEEEecCCccchHHHHHHHHHHHHhC-CcEEEEecCcCCHHHHHHHHHHHH
Confidence            357999999999999999999999999 87766654321 111111    11111 168889999999998887764   


Q ss_pred             ----CccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEe-CccceeccCCCCCCccccC
Q 020110           80 ----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVT-SSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 ----~~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~-SS~~~~~~~~~~~~~~~~E  148 (331)
                          ++|++||+|+....    ....++....+++|+.++..+++++...  ...+++++ ||....+ .+.        
T Consensus        85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~-~~~--------  155 (257)
T PRK12744         85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF-TPF--------  155 (257)
T ss_pred             HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc-CCC--------
Confidence                47999999997432    1223345778999999999999988654  12456665 4432211 111        


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                  ...|+.+|...|.+.+.++++.   ++++++++||.+.++...+....  .... .........+...
T Consensus       156 ------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~~-~~~~~~~~~~~~~  220 (257)
T PRK12744        156 ------------YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGA--EAVA-YHKTAAALSPFSK  220 (257)
T ss_pred             ------------cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcccccc--chhh-ccccccccccccc
Confidence                        1379999999999999998764   69999999999988753221110  0000 0000000011122


Q ss_pred             CCceeHHHHHHHHHHhhcCCC-CCc-eEEEec
Q 020110          226 LGAVPVKDVAKAQVLLFESPA-ASG-RYLCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~-~~g-~~~~~~  255 (331)
                      ..+.+++|++.++..++.... ..| .+++.+
T Consensus       221 ~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~g  252 (257)
T PRK12744        221 TGLTDIEDIVPFIRFLVTDGWWITGQTILING  252 (257)
T ss_pred             CCCCCHHHHHHHHHHhhcccceeecceEeecC
Confidence            357899999999999988431 235 454443

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.83  E-value=1.2e-18  Score=147.10  Aligned_cols=216  Identities=22%  Similarity=0.258  Sum_probs=147.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      |+++||||+|+||++++++|+++|+ +|+++.|+... ...........+.++.++.+|+.+.+++.++++       .+
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999 99999887531 111111111111268899999999988877664       47


Q ss_pred             cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+++.....    ...+.....++.|+.++.++.+++    ++.+.++||++||..+..+.++.            
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~------------  149 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQ------------  149 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCC------------
Confidence            9999999875431    223334677899999998886544    55566799999987544322221            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                              ..|+.+|...+.+.+.++.   ..++++++++|+.+.++......   ...........      ....+..
T Consensus       150 --------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~~~~~~~~~~------~~~~~~~  212 (245)
T PRK12824        150 --------TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG---PEVLQSIVNQI------PMKRLGT  212 (245)
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC---HHHHHHHHhcC------CCCCCCC
Confidence                    2699999998888877764   34899999999999887543211   11122222221      1234567


Q ss_pred             HHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          231 VKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      ++|+++++..++....  ..| .+.+.+
T Consensus       213 ~~~va~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK12824        213 PEEIAAAVAFLVSEAAGFITGETISING  240 (245)
T ss_pred             HHHHHHHHHHHcCccccCccCcEEEECC
Confidence            8999999988876432  245 454443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.83  E-value=7.9e-19  Score=148.71  Aligned_cols=219  Identities=15%  Similarity=0.107  Sum_probs=149.1

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      |.+|. .+.|++|||||+|.||++++++|+++|+ +|+++.|+.... .......... ++.++.+|+++++++.++++ 
T Consensus         1 ~~~~~-l~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~-~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~   76 (251)
T PRK12481          1 MQLFD-LNGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPE-TQAQVEALGR-KFHFITADLIQQKDIDSIVSQ   76 (251)
T ss_pred             CCCcc-cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHH-HHHHHHHcCC-eEEEEEeCCCCHHHHHHHHHH
Confidence            44443 3467999999999999999999999999 999887754221 1111111112 68899999999998887775 


Q ss_pred             ------CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CC-CCEEEEeCccceeccCCCCCCc
Q 020110           80 ------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGK  144 (331)
Q Consensus        80 ------~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~  144 (331)
                            .+|++||+||......    ..+++...+++|+.++..+.+++..    .+ -.++|++||...+.+.+..   
T Consensus        77 ~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~---  153 (251)
T PRK12481         77 AVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRV---  153 (251)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCC---
Confidence                  4799999999754321    2344577899999999888887643    22 3589999997554332221   


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCcc
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (331)
                                       ..|+.+|...+.+.+.++.+   +|+++..++||.+-.+..... ..............    
T Consensus       154 -----------------~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~----  211 (251)
T PRK12481        154 -----------------PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL-RADTARNEAILERI----  211 (251)
T ss_pred             -----------------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc-ccChHHHHHHHhcC----
Confidence                             27999999999999887754   589999999999977643211 00011111111111    


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCC--CCCce
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESP--AASGR  250 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~  250 (331)
                      +  ...+...+|+|+++..++...  ...|.
T Consensus       212 p--~~~~~~peeva~~~~~L~s~~~~~~~G~  240 (251)
T PRK12481        212 P--ASRWGTPDDLAGPAIFLSSSASDYVTGY  240 (251)
T ss_pred             C--CCCCcCHHHHHHHHHHHhCccccCcCCc
Confidence            1  123678899999999988643  24553

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.3e-19  Score=150.51  Aligned_cols=209  Identities=16%  Similarity=0.102  Sum_probs=142.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Ccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   82 (331)
                      |+++||||+|+||+++++.|++.|+ +|+++.|+..............+.++.++.+|+++++++.++++       .+|
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            6899999999999999999999999 99999987654333322111111278899999999988877664       479


Q ss_pred             EEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHh----CC-CCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        83 ~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      +|||+|+....    +...+.+...+++|+.++.++++++..    .+ ..++|++||.....+...             
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-------------  147 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG-------------  147 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCC-------------
Confidence            99999985432    112233477899999999999998843    22 357999998643221111             


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                             ...|+.+|...+.+.+.++.+    +|+++..++||.+.++...............+....+      ...+.
T Consensus       148 -------~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  214 (252)
T PRK07677        148 -------VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVP------LGRLG  214 (252)
T ss_pred             -------CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCC------CCCCC
Confidence                   126999999999888876654    4899999999999854321111011122223222211      22467


Q ss_pred             eHHHHHHHHHHhhcCC
Q 020110          230 PVKDVAKAQVLLFESP  245 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~  245 (331)
                      ..+|+++++..++...
T Consensus       215 ~~~~va~~~~~l~~~~  230 (252)
T PRK07677        215 TPEEIAGLAYFLLSDE  230 (252)
T ss_pred             CHHHHHHHHHHHcCcc
Confidence            8899999998887643

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.9e-19  Score=151.52  Aligned_cols=219  Identities=14%  Similarity=0.076  Sum_probs=149.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCE-EEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTS-INATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~-V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .|+|+||||+|+||++++++|++.|+ + |+++.|+........ .+... +..+.++.+|+++++++.++++       
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~G~-~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAERGA-AGLVICGRNAEKGEAQAAELEAL-GAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999 7 999988754332211 11111 1267889999999988877664       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      ++|+|||+++.....    ...+.....+++|+.++.++++++...    + ..++|++||...+.+.+..         
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~---------  154 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFL---------  154 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCc---------
Confidence            479999999875431    122233567899999999998877432    2 3579999997554322211         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCC----CChhHHHHHHHHcCCCCccCc
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY----LNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                 ..|+.+|...|.+.+.++.+.   +++++.++|+.++++.....    ......++.......      
T Consensus       155 -----------~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~------  217 (260)
T PRK06198        155 -----------AAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ------  217 (260)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC------
Confidence                       379999999999998877554   69999999999998863210    000111222211111      


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      ....+++++|+++++.+++....  ..| .+...+
T Consensus       218 ~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~  252 (260)
T PRK06198        218 PFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQ  252 (260)
T ss_pred             CccCCcCHHHHHHHHHHHcChhhCCccCceEeECC
Confidence            13457899999999999886543  345 344444

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.83  E-value=8.5e-19  Score=152.06  Aligned_cols=215  Identities=23%  Similarity=0.144  Sum_probs=148.8

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      |...+.++||||||+|.||.++++.|.+.|+ +|+++.|+......+.+...... .+..+.+|++|.+++.++++    
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDD-RVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCC-cEEEEEecCCCHHHHHHHHHHHHH
Confidence            3344567999999999999999999999999 99999997654433322211111 56677799999988877653    


Q ss_pred             ---CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                         .+|+|||+||......    ..++....+++|+.++.++++++...   ...++|++||..++.+.++.        
T Consensus        82 ~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  153 (296)
T PRK05872         82 RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGM--------  153 (296)
T ss_pred             HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCc--------
Confidence               4799999999754321    22334677899999999999887532   23589999997554433221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                  ..|+.+|...+.+.+.++.   ..|++++++.|+.+.++........ ......+....+.    ...
T Consensus       154 ------------~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~-~~~~~~~~~~~~~----p~~  216 (296)
T PRK05872        154 ------------AAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD-LPAFRELRARLPW----PLR  216 (296)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc-chhHHHHHhhCCC----ccc
Confidence                        3799999999999887764   3589999999999987753221110 0111121111111    123


Q ss_pred             CceeHHHHHHHHHHhhcCC
Q 020110          227 GAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~  245 (331)
                      .++..+|+++++..++...
T Consensus       217 ~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        217 RTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             CCCCHHHHHHHHHHHHhcC
Confidence            4678999999999998754

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3e-19  Score=155.78  Aligned_cols=187  Identities=17%  Similarity=0.088  Sum_probs=126.3

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh-hcCCC-CCCCcEEEEEccCCCchHHHHHhc--
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPG-AGDANLRVFEADVLDSGAVSRAVE--   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~--   79 (331)
                      |++.+.|+|+||||+|+||++++++|++.|+ +|+++.|+....... ..+.. ..+..+.++.+|++|.+++.++++  
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            3344568999999999999999999999999 999999875432221 11111 011268899999999998877664  


Q ss_pred             -----CccEEEEcccCCCCC--CCCCchhhhhHHHHHH----HHHHHHHHHhCCCCEEEEeCccceec-cCCCCCCcccc
Q 020110           80 -----GCKGVFHVASPCTLE--DPVDPEKELILPAVQG----TLNVLEAAKRFGVRRVVVTSSISAIV-PNPGWKGKVFD  147 (331)
Q Consensus        80 -----~~d~vih~a~~~~~~--~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~v~~SS~~~~~-~~~~~~~~~~~  147 (331)
                           ++|+|||+||.....  ...+.....+++|+.+    +..+++.+++.+.+++|++||..... +....  ....
T Consensus        90 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~--~~~~  167 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHF--DDLQ  167 (306)
T ss_pred             HhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCc--cccC
Confidence                 479999999975432  2234456779999999    55555556655667999999974332 11111  1111


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEE--EEcCCcccCCCC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVV--AIHPATCLGPLM  199 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~--~lR~~~v~G~~~  199 (331)
                      ++.+..+      ...|+.+|...+.+.+.++++.   +++++  .+.||.+.++..
T Consensus       168 ~~~~~~~------~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~  218 (306)
T PRK06197        168 WERRYNR------VAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA  218 (306)
T ss_pred             cccCCCc------HHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence            1111111      2379999999999998887653   55544  458999987754

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=2.2e-18  Score=146.45  Aligned_cols=216  Identities=14%  Similarity=0.121  Sum_probs=144.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      .|+++||||+|+||++++++|.+.|+ +|+++.|+.... ..+...      ++.++.+|++|++++.++++       +
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~------~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREK------GVFTIKCDVGNRDQVKKSKEVVEKEFGR   79 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhC------CCeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999 988876654321 222111      47789999999998887764       4


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHH----HHhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+|+.....    ...+++...+++|+.++..+.++    .++.+.+++|++||...+.....            
T Consensus        80 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~------------  147 (255)
T PRK06463         80 VDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAE------------  147 (255)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCC------------
Confidence            79999999875421    12233467789999997666554    44445578999999744321100            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCCh--hHHHHHHHHcCCCCccCcCCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--SCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                             ....|+.+|...+.+.+.++.+   .++++++++|+.+-.+........  ............      ....
T Consensus       148 -------~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~  214 (255)
T PRK06463        148 -------GTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT------VLKT  214 (255)
T ss_pred             -------CccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC------CcCC
Confidence                   0126999999999999888755   489999999999876643211000  001111111111      1244


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g~-~~~~~~  256 (331)
                      +..++|++++++.++....  ..|. +.+.++
T Consensus       215 ~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg  246 (255)
T PRK06463        215 TGKPEDIANIVLFLASDDARYITGQVIVADGG  246 (255)
T ss_pred             CcCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            6789999999999887543  3453 455443

>TIGR02415 23BDH acetoin reductases

Probab=99.82  E-value=4.8e-19  Score=150.40  Aligned_cols=216  Identities=19%  Similarity=0.224  Sum_probs=146.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      |+++||||+|+||.+++++|++.|+ +|+++.|+........ .+..... ++.++.+|++|++++.++++       .+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGG-KAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999999 9999988754322221 1111112 68899999999998877654       47


Q ss_pred             cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CC-CCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        82 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      |+|||+|+.....    ...+.....+++|+.++..+++++..    .+ .+++|++||....++.+..           
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  147 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPIL-----------  147 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCC-----------
Confidence            9999999875432    12233467799999999887776543    22 2589999997665543332           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCcc-------C
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-------E  222 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-------~  222 (331)
                               ..|+.+|...+.+++.++++.   ++++++++|+.+.++.....    .....+ ..+.+...       .
T Consensus       148 ---------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~  213 (254)
T TIGR02415       148 ---------SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEI----DEETSE-IAGKPIGEGFEEFSSE  213 (254)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhh----hhhhhh-cccCchHHHHHHHHhh
Confidence                     379999999999998776553   79999999998876642110    000000 00000000       0


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCCC--CCceEE
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~~  252 (331)
                      .....+..++|+++++..++....  ..|.++
T Consensus       214 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~  245 (254)
T TIGR02415       214 IALGRPSEPEDVAGLVSFLASEDSDYITGQSI  245 (254)
T ss_pred             CCCCCCCCHHHHHHHHHhhcccccCCccCcEE
Confidence            012347889999999999998654  346553

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK09242 tropinone reductase; Provisional

Probab=99.82  E-value=8.4e-19  Score=149.18  Aligned_cols=210  Identities=16%  Similarity=0.147  Sum_probs=147.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCC-CCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|+++||||+|.||+++++.|.++|+ +|++++|+......... +... .+.++.++.+|+++++++.++++      
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999999 99999987644332221 1110 11268889999999988766654      


Q ss_pred             -CccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       .+|+|||+|+....    ....++....+.+|+.++.++++++.    +.+.+++|++||.....+....         
T Consensus        87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~---------  157 (257)
T PRK09242         87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSG---------  157 (257)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCC---------
Confidence             47999999986432    12234457789999999999988874    3455789999997554322221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+++.++.+   .+++++.++|+.+.++....... ............+      ..-
T Consensus       158 -----------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~-~~~~~~~~~~~~~------~~~  219 (257)
T PRK09242        158 -----------APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS-DPDYYEQVIERTP------MRR  219 (257)
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC-ChHHHHHHHhcCC------CCC
Confidence                       37999999999999887644   48999999999999886432211 1222222222211      123


Q ss_pred             ceeHHHHHHHHHHhhcCC
Q 020110          228 AVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~  245 (331)
                      +...+|++.++..++...
T Consensus       220 ~~~~~~va~~~~~l~~~~  237 (257)
T PRK09242        220 VGEPEEVAAAVAFLCMPA  237 (257)
T ss_pred             CcCHHHHHHHHHHHhCcc
Confidence            456799999999888643

>PRK12742 oxidoreductase; Provisional

Probab=99.82  E-value=7.9e-19  Score=147.49  Aligned_cols=209  Identities=15%  Similarity=0.108  Sum_probs=142.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC-CccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---CccE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKG   83 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   83 (331)
                      ++|+||||||+|+||++++++|+++|+ +|+++.|+. .....+....     ++.++.+|++|.+++.+.++   ++|+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~id~   78 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRKSGALDI   78 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHHhCCCcE
Confidence            357999999999999999999999999 888776543 2222221110     45678899999888877664   3899


Q ss_pred             EEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCChhhh
Q 020110           84 VFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (331)
Q Consensus        84 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (331)
                      +||+|+.....    ...++....+++|+.++..+++.+...  ...++|++||......       +..          
T Consensus        79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------~~~----------  141 (237)
T PRK12742         79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM-------PVA----------  141 (237)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC-------CCC----------
Confidence            99999875431    122345778999999999997765543  3468999998643110       000          


Q ss_pred             hccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHH
Q 020110          158 KSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (331)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  234 (331)
                        ....|+.+|...+.+++.++.+   .|+++++++||.+..+..... ...   ........      ....+...+|+
T Consensus       142 --~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~-~~~---~~~~~~~~------~~~~~~~p~~~  209 (237)
T PRK12742        142 --GMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN-GPM---KDMMHSFM------AIKRHGRPEEV  209 (237)
T ss_pred             --CCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc-cHH---HHHHHhcC------CCCCCCCHHHH
Confidence              1137999999999999887754   479999999999987753221 111   11111111      11235788999


Q ss_pred             HHHHHHhhcCCC--CCceE
Q 020110          235 AKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       235 a~a~~~~l~~~~--~~g~~  251 (331)
                      ++++..++....  ..|..
T Consensus       210 a~~~~~l~s~~~~~~~G~~  228 (237)
T PRK12742        210 AGMVAWLAGPEASFVTGAM  228 (237)
T ss_pred             HHHHHHHcCcccCcccCCE
Confidence            999998886542  34543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.82  E-value=1.1e-18  Score=147.38  Aligned_cols=206  Identities=17%  Similarity=0.152  Sum_probs=140.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC-CCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~-~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .|.++||||+|+||++++++|+++|+ +|++..+. .... ....+..... ..+.++.+|+.|.+++.++++       
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALG-FDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999 88875432 2211 1122211111 167788999999988877664       


Q ss_pred             CccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+|+....    +...+++...+++|+.++..+.+++    ++.+.+++|++||.....+.++.          
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------  150 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQ----------  150 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCC----------
Confidence            57999999997542    1123345777899999977766655    34566799999987543322221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++++   .++++++++|+.+.++.....   ....+..+....      ....+
T Consensus       151 ----------~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~------~~~~~  211 (246)
T PRK12938        151 ----------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATI------PVRRL  211 (246)
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc---ChHHHHHHHhcC------CccCC
Confidence                      37999999988888777644   589999999999988764321   112222222221      12345


Q ss_pred             eeHHHHHHHHHHhhcCC
Q 020110          229 VPVKDVAKAQVLLFESP  245 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~  245 (331)
                      ...+|+++++..++...
T Consensus       212 ~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        212 GSPDEIGSIVAWLASEE  228 (246)
T ss_pred             cCHHHHHHHHHHHcCcc
Confidence            67899999999888653

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.82  E-value=1.5e-18  Score=146.81  Aligned_cols=215  Identities=19%  Similarity=0.152  Sum_probs=142.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEec-CCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ||+||||||+|+||+.+++.|++.|+ +|++..+ ++.............+.++.++.+|+++++++.++++       .
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999 8876654 3322222111111111268899999999988776653       5


Q ss_pred             ccEEEEcccCCCCCC-----CCCchhhhhHHHHHHHHHHHHHHHh-CC------CCEEEEeCccceeccCCCCCCccccC
Q 020110           81 CKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKR-FG------VRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        81 ~d~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~-~~------~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                      +|+|||+|+......     ..++....+++|+.++..+++++.. ..      -.++|++||..++++.+..       
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-------  153 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE-------  153 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCC-------
Confidence            899999999754211     1222356689999999888764432 21      2369999997665543221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                             +     ..|+.+|...+.+.+.++++.   +++++++||+.+.++........  ..........+      .
T Consensus       154 -------~-----~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~------~  213 (248)
T PRK06947        154 -------Y-----VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQP--GRAARLGAQTP------L  213 (248)
T ss_pred             -------C-----cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCH--HHHHHHhhcCC------C
Confidence                   0     269999999999888887654   79999999999998853221111  11111111111      1


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCceE
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g~~  251 (331)
                      .-...++|+++.+++++....  ..|.+
T Consensus       214 ~~~~~~e~va~~~~~l~~~~~~~~~G~~  241 (248)
T PRK06947        214 GRAGEADEVAETIVWLLSDAASYVTGAL  241 (248)
T ss_pred             CCCcCHHHHHHHHHHHcCccccCcCCce
Confidence            124678999999999887653  35544

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.82  E-value=5.5e-19  Score=149.95  Aligned_cols=210  Identities=18%  Similarity=0.149  Sum_probs=145.1

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||+|+||++++++|+++|+ +|+++.|+..............+.++..+.+|+++++++.++++       
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3457999999999999999999999999 99999987654333222111111267889999999988877764       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .+|++||+|+......    ..+.....+++|+.++..+++++...    + -.++|++||..+.......         
T Consensus        86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~---------  156 (253)
T PRK05867         86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQ---------  156 (253)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCC---------
Confidence            5899999999754321    22334667889999999998877432    2 2468999886432111000         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                               ....|+.+|...+.+.+.++++   .|+++..++||.+-++.....    ......+....+      ...
T Consensus       157 ---------~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~------~~r  217 (253)
T PRK05867        157 ---------QVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY----TEYQPLWEPKIP------LGR  217 (253)
T ss_pred             ---------CccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc----hHHHHHHHhcCC------CCC
Confidence                     0127999999999999988755   489999999999987753221    111111211111      224


Q ss_pred             ceeHHHHHHHHHHhhcCC
Q 020110          228 AVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~  245 (331)
                      +...+|+|+++++++...
T Consensus       218 ~~~p~~va~~~~~L~s~~  235 (253)
T PRK05867        218 LGRPEELAGLYLYLASEA  235 (253)
T ss_pred             CcCHHHHHHHHHHHcCcc
Confidence            678999999999988643

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=2.3e-18  Score=146.42  Aligned_cols=214  Identities=18%  Similarity=0.117  Sum_probs=143.6

Q ss_pred             CCCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCCCcc---------ch--hhcCCCCCCCcEEEEEccCCCchHH
Q 020110            8 EEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDS---------SH--LFALPGAGDANLRVFEADVLDSGAV   74 (331)
Q Consensus         8 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~---------~~--~~~~~~~~~~~~~~~~~Dl~~~~~~   74 (331)
                      ++++||||||+|  .||.+++++|+++|+ +|+++.|++.+.         ..  +.......+.++.++.+|+++.+++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGI-DIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCC-cEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            357899999996  699999999999999 999998873211         00  1110001112688999999999887


Q ss_pred             HHHhc-------CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCC
Q 020110           75 SRAVE-------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNP  139 (331)
Q Consensus        75 ~~~~~-------~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~  139 (331)
                      .++++       .+|+|||+|+......    ..+++...+++|+.++.++++++...    +.+++|++||...+.+.+
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~  162 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP  162 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC
Confidence            76664       3799999998754322    12334667899999999999987543    346899999874433221


Q ss_pred             CCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcC
Q 020110          140 GWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQG  216 (331)
Q Consensus       140 ~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  216 (331)
                      +.                    ..|+.+|...+.+++.++.+   .+++++.++|+.+..+....      .........
T Consensus       163 ~~--------------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~------~~~~~~~~~  216 (256)
T PRK12748        163 DE--------------------LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE------ELKHHLVPK  216 (256)
T ss_pred             Cc--------------------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh------hHHHhhhcc
Confidence            11                    37999999999998887654   48999999999887664221      111111111


Q ss_pred             CCCccCcCCCCceeHHHHHHHHHHhhcCCC--CCceE-EEe
Q 020110          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCT  254 (331)
Q Consensus       217 ~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~-~~~  254 (331)
                      .      ....+...+|+++++.+++....  ..|.+ ++.
T Consensus       217 ~------~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d  251 (256)
T PRK12748        217 F------PQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSE  251 (256)
T ss_pred             C------CCCCCcCHHHHHHHHHHHhCcccccccCCEEEec
Confidence            1      11224567999999988876532  34644 443

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.82  E-value=2.3e-18  Score=146.07  Aligned_cols=215  Identities=16%  Similarity=0.106  Sum_probs=147.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .++|++|||||+|.||++++++|.+.|+ +|++++|+... .....+..... ++.++++|++|.+++.++++       
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~-~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPT-ETIEQVTALGR-RFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchH-HHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            3457999999999999999999999999 99887764321 11111111112 68889999999988887775       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .+|++||+||.....    ...+++...+++|+.++.++++++...    + -.++|++||..+..+.+..         
T Consensus        85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  155 (253)
T PRK08993         85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRV---------  155 (253)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCC---------
Confidence            479999999975432    123456788999999999998876432    2 2579999997554332221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+   .|++++.++||.+-.+..... .........+...  .  +  ..-
T Consensus       156 -----------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~-~~~~~~~~~~~~~--~--p--~~r  217 (253)
T PRK08993        156 -----------PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQL-RADEQRSAEILDR--I--P--AGR  217 (253)
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhh-ccchHHHHHHHhc--C--C--CCC
Confidence                       27999999999999888765   589999999999988753211 0001111111111  1  1  123


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCceE
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g~~  251 (331)
                      +...+|+|+.++.++....  ..|..
T Consensus       218 ~~~p~eva~~~~~l~s~~~~~~~G~~  243 (253)
T PRK08993        218 WGLPSDLMGPVVFLASSASDYINGYT  243 (253)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCcE
Confidence            6778999999999887542  34543

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2e-18  Score=146.31  Aligned_cols=197  Identities=15%  Similarity=0.166  Sum_probs=137.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCc-cchh-hcCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~-~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      +.++|+||||+|+||++++++|+++| + +|+++.|+... ...+ .++......+++++.+|++|++++.++++     
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            35689999999999999999999995 8 99999998764 2221 11111111268899999999887665543     


Q ss_pred             -CccEEEEcccCCCCC-CCCCch---hhhhHHHHHHHHH----HHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLE-DPVDPE---KELILPAVQGTLN----VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~-~~~~~~---~~~~~~n~~~~~~----l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|++||++|..... ....+.   .+.+++|+.++..    +++++++.+..++|++||..+..+.+.          
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~----------  155 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRS----------  155 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCC----------
Confidence             589999999875431 111112   2468999988876    455666667789999999743221111          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHH---HHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                ...|+.+|.....+.+.++   +.+++++++++||.+..+.....            ..        ...
T Consensus       156 ----------~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~------------~~--------~~~  205 (253)
T PRK07904        156 ----------NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA------------KE--------APL  205 (253)
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC------------CC--------CCC
Confidence                      1369999999887666554   34689999999999987642210            00        012


Q ss_pred             ceeHHHHHHHHHHhhcCC
Q 020110          228 AVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~  245 (331)
                      .+..+|+|+.++.++.+.
T Consensus       206 ~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        206 TVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             CCCHHHHHHHHHHHHHcC
Confidence            468899999999999765

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.1e-18  Score=145.15  Aligned_cols=199  Identities=14%  Similarity=0.060  Sum_probs=137.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCc--hHHHHHh------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDS--GAVSRAV------   78 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~--~~~~~~~------   78 (331)
                      ++++|+||||+|+||++++++|+++|+ +|++++|+......... +.......+.++.+|+.+.  +++.+++      
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            357999999999999999999999999 99999998754332211 1111111466788999753  3344332      


Q ss_pred             --cCccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCcccc
Q 020110           79 --EGCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        79 --~~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                        .++|+|||+|+....     +...++....+++|+.++.++++++..    .+..++|++||..+..+.+.       
T Consensus        84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-------  156 (239)
T PRK08703         84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAY-------  156 (239)
T ss_pred             hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCC-------
Confidence              357999999996432     111223455789999999998887743    34568999998643222111       


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc----CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH----GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                   ...|+.+|...+.+++.++.+.    ++++++++||.+.+|......           .+      .
T Consensus       157 -------------~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~-----------~~------~  206 (239)
T PRK08703        157 -------------WGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH-----------PG------E  206 (239)
T ss_pred             -------------ccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC-----------CC------C
Confidence                         1379999999999998887664    599999999999998632110           01      0


Q ss_pred             CCCCceeHHHHHHHHHHhhcC
Q 020110          224 HWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      ....+...+|++.++..++..
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        207 AKSERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             CccccCCHHHHHHHHHHHhCc
Confidence            112356889999999998873

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2e-18  Score=148.10  Aligned_cols=213  Identities=22%  Similarity=0.243  Sum_probs=144.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch----hh----cCCCCCCCcEEEEEccCCCchHHHHHhc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH----LF----ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~----~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      ++++++||||+|+||++++++|+++|+ +|+++.|+......    +.    +...... ++.++.+|+++++++.++++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG-QALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHH
Confidence            457999999999999999999999999 99999987543211    11    1111112 68899999999998887765


Q ss_pred             -------CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCc
Q 020110           80 -------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGK  144 (331)
Q Consensus        80 -------~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~  144 (331)
                             ++|+|||+||......    ..++....+++|+.++.++++++...    +-.++|++||.....+  ..   
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--~~---  157 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP--KW---  157 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc--cc---
Confidence                   5799999999754322    12334667889999999999988532    3357889887522111  00   


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCc-ccCCCCCCCCChhHHHHHHHHcCCCCc
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPAT-CLGPLMQPYLNASCAVLQQLLQGSKDT  220 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~-v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (331)
                             . +     ....|+.+|...|.+++.++.+.   +++++.+.|+. +-.+..           .....+.   
T Consensus       158 -------~-~-----~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~-----------~~~~~~~---  210 (273)
T PRK08278        158 -------F-A-----PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAV-----------RNLLGGD---  210 (273)
T ss_pred             -------c-C-----CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHH-----------Hhccccc---
Confidence                   0 0     11379999999999999887654   79999999984 322210           0110111   


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCCC--CCceEEEecc
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~~~~~~  256 (331)
                        .....+...+|+|++++.++....  ..|.++..++
T Consensus       211 --~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~~~~  246 (273)
T PRK08278        211 --EAMRRSRTPEIMADAAYEILSRPAREFTGNFLIDEE  246 (273)
T ss_pred             --ccccccCCHHHHHHHHHHHhcCccccceeEEEeccc
Confidence              012246788999999999887643  3555555443

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.81  E-value=2.5e-18  Score=146.78  Aligned_cols=208  Identities=20%  Similarity=0.138  Sum_probs=143.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +.|++|||||+|+||++++++|+++|+ +|++++|+......+....   +.++.++++|+++++++.++++       .
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAFGK   80 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            357999999999999999999999999 9999998765443332211   1157889999999988877664       4


Q ss_pred             ccEEEEcccCCCCC-----CCCCc----hhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccC
Q 020110           81 CKGVFHVASPCTLE-----DPVDP----EKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        81 ~d~vih~a~~~~~~-----~~~~~----~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                      +|++||+|+.....     ...+.    +...+++|+.++..+++++...   .-.++|++||...+.+.++.       
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------  153 (263)
T PRK06200         81 LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGG-------  153 (263)
T ss_pred             CCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCC-------
Confidence            79999999975321     11111    3456889999999888877532   22579999997554432221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCC--------ChhHHHHHHHHcCCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYL--------NASCAVLQQLLQGSK  218 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~--------~~~~~~~~~~~~~~~  218 (331)
                                   ..|+.+|...+.+.+.++.+.  ++++..+.||.+..+......        .............  
T Consensus       154 -------------~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  218 (263)
T PRK06200        154 -------------PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI--  218 (263)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC--
Confidence                         269999999999999887653  599999999999876432100        0000001111111  


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      .    ...-+...+|++.++..++...
T Consensus       219 ~----p~~r~~~~~eva~~~~fl~s~~  241 (263)
T PRK06200        219 T----PLQFAPQPEDHTGPYVLLASRR  241 (263)
T ss_pred             C----CCCCCCCHHHHhhhhhheeccc
Confidence            0    1234678899999999988644

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.7e-18  Score=146.77  Aligned_cols=214  Identities=17%  Similarity=0.113  Sum_probs=140.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC-------   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------   81 (331)
                      ||+||||||+|+||++++++|+++|+ +|++++|++.+  .+..+....+.+++++.+|++++++++++++++       
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~-~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGT-HVISISRTENK--ELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCC-EEEEEeCCchH--HHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            57899999999999999999999999 99999987522  112111111127889999999999888777532       


Q ss_pred             ----cEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHH----HhC-CCCEEEEeCccceeccCCCCCCcccc
Q 020110           82 ----KGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRF-GVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        82 ----d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                          .++||+||....     ....+.....+++|+.+...+++.+    ++. +.+++|++||..+..+.+.       
T Consensus        78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  150 (251)
T PRK06924         78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFG-------  150 (251)
T ss_pred             cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCC-------
Confidence                278999986532     1222334666788988866666554    332 3458999998643221111       


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH-----cCCeEEEEcCCcccCCCCCCC---CChhHHHHHHHHcCCCC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKD  219 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~  219 (331)
                                   ...|+.+|...+.+++.++.+     .++++..++||.+-++.....   ...............  
T Consensus       151 -------------~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--  215 (251)
T PRK06924        151 -------------WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK--  215 (251)
T ss_pred             -------------cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh--
Confidence                         137999999999999888755     369999999998876542100   000000011111100  


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcC-CCCCceE
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFES-PAASGRY  251 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~-~~~~g~~  251 (331)
                          ....+..++|+|++++.++.. ....|.+
T Consensus       216 ----~~~~~~~~~dva~~~~~l~~~~~~~~G~~  244 (251)
T PRK06924        216 ----EEGKLLSPEYVAKALRNLLETEDFPNGEV  244 (251)
T ss_pred             ----hcCCcCCHHHHHHHHHHHHhcccCCCCCE
Confidence                012368899999999999876 3445543

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.2e-18  Score=147.09  Aligned_cols=201  Identities=18%  Similarity=0.117  Sum_probs=143.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------Ccc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d   82 (331)
                      +++||||||+|+||.+++++|+++|+ +|++++|+......+........ ++.++.+|++|++++.++++      .+|
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPG-RHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            56899999999999999999999999 99999997654333322111122 78899999999988776654      479


Q ss_pred             EEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           83 GVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        83 ~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +|||+||......    ..+.....+++|+.++.++++++..    .+.+++|++||..+.++.++.             
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------------  149 (263)
T PRK09072         83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGY-------------  149 (263)
T ss_pred             EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCc-------------
Confidence            9999998754311    1223466788999999999988754    234679999987554433221             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                             ..|+.+|...+.+.+.++.+   .+++++++.|+.+.++......        .....      ........+
T Consensus       150 -------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~--------~~~~~------~~~~~~~~~  208 (263)
T PRK09072        150 -------ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV--------QALNR------ALGNAMDDP  208 (263)
T ss_pred             -------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc--------ccccc------cccCCCCCH
Confidence                   26999999988888777654   4799999999988765421100        00000      011235788


Q ss_pred             HHHHHHHHHhhcCC
Q 020110          232 KDVAKAQVLLFESP  245 (331)
Q Consensus       232 ~D~a~a~~~~l~~~  245 (331)
                      +|+|++++.+++..
T Consensus       209 ~~va~~i~~~~~~~  222 (263)
T PRK09072        209 EDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999999865

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.81  E-value=9.7e-19  Score=166.67  Aligned_cols=223  Identities=19%  Similarity=0.158  Sum_probs=148.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCC-CCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG-AGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .++|+||||||+|+||++++++|++.|+ +|++++|+......... +.. .....+..+.+|++|++++.++++     
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            3468999999999999999999999999 99999987644332221 110 011157788999999999888775     


Q ss_pred             --CccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHH----HhCC-CCEEEEeCccceeccCCCCCCccccC
Q 020110           80 --GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                        ++|+|||+||.......    .+.....+++|+.+...+.+.+    +..+ ..++|++||..++++.++.       
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~-------  563 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNA-------  563 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCC-------
Confidence              58999999997543211    2234567888888887766544    3333 2579999997665543322       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCccc-CCCCCCCCChh---------HHHHHHHHc
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCL-GPLMQPYLNAS---------CAVLQQLLQ  215 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~-G~~~~~~~~~~---------~~~~~~~~~  215 (331)
                                   ..|+.+|...+.+++.++.+   .|++++.++|+.++ |..........         ...+.....
T Consensus       564 -------------~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  630 (676)
T TIGR02632       564 -------------SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYA  630 (676)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHH
Confidence                         37999999999999988765   47999999999887 33221110000         000001000


Q ss_pred             CCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       216 ~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                           .......+++++|+|+++..++...  ...|. +++.+
T Consensus       631 -----~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       631 -----KRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDG  668 (676)
T ss_pred             -----hcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence                 1112345789999999999887643  33464 45544

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.2e-18  Score=146.95  Aligned_cols=223  Identities=12%  Similarity=0.076  Sum_probs=148.5

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      |..+. .++|++|||||+|.||++++++|+++|+ +|++++|+........+ +....+.++.++.+|++|++++.++++
T Consensus         1 ~~~~~-l~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~   78 (263)
T PRK08339          1 MLKID-LSGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVK   78 (263)
T ss_pred             CCccC-CCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            44543 3457899999999999999999999999 99999987544322221 111111268899999999998887775


Q ss_pred             ------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCcc
Q 020110           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        80 ------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                            .+|++||+||.....    ...+++...+++|+.+...+.+++    ++.+..++|++||.....+.+..    
T Consensus        79 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~----  154 (263)
T PRK08339         79 ELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNI----  154 (263)
T ss_pred             HHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcc----
Confidence                  479999999865432    223445778899988777666554    44456789999997543222111    


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCC-------C-hhHHHHHHHH
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-------N-ASCAVLQQLL  214 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~-------~-~~~~~~~~~~  214 (331)
                                      ..|+.+|...+.+.+.++.+   +|+++..+.||.+..+......       . ........+.
T Consensus       155 ----------------~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (263)
T PRK08339        155 ----------------ALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYA  218 (263)
T ss_pred             ----------------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHh
Confidence                            26999999999888887755   4799999999999776321000       0 0001111111


Q ss_pred             cCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       215 ~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      ..  .    ....+...+|+|+++..++...  ...|..
T Consensus       219 ~~--~----p~~r~~~p~dva~~v~fL~s~~~~~itG~~  251 (263)
T PRK08339        219 KP--I----PLGRLGEPEEIGYLVAFLASDLGSYINGAM  251 (263)
T ss_pred             cc--C----CcccCcCHHHHHHHHHHHhcchhcCccCce
Confidence            11  1    1234677899999999988653  245644

>PRK07069 short chain dehydrogenase; Validated

Probab=99.81  E-value=1.5e-18  Score=147.09  Aligned_cols=208  Identities=19%  Similarity=0.204  Sum_probs=141.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC-CCccchhhc-CCCC-CCCcEEEEEccCCCchHHHHHhc-------C
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~-~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +++||||+|+||+++++.|+++|+ +|+++.|+ ......+.+ +... ....+..+.+|+++.+++.++++       .
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            489999999999999999999999 99999987 332222221 1111 11134567899999988876664       4


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHH----HHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQ----GTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~----~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+|+......    ..++....+++|+.    ++..+++++++.+.+++|++||..++.+.++.           
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~-----------  148 (251)
T PRK07069         80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDY-----------  148 (251)
T ss_pred             ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCC-----------
Confidence            799999998765321    12233566788887    66777777777777899999997655443332           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc-----CCeEEEEcCCcccCCCCCCCCCh--hHHHHHHHHcCCCCccCcCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-----GVDVVAIHPATCLGPLMQPYLNA--SCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~~~~~~lR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  225 (331)
                               ..|+.+|...+.+.+.++.+.     +++++.++|+.+.++........  .......+..+.      ..
T Consensus       149 ---------~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~  213 (251)
T PRK07069        149 ---------TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV------PL  213 (251)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccC------CC
Confidence                     269999999999888876542     48899999999998864321000  001111122221      12


Q ss_pred             CCceeHHHHHHHHHHhhcCC
Q 020110          226 LGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~  245 (331)
                      ..+.+++|++++++.++...
T Consensus       214 ~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        214 GRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             CCCcCHHHHHHHHHHHcCcc
Confidence            34568999999999877653

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.81  E-value=1.7e-18  Score=148.05  Aligned_cols=211  Identities=19%  Similarity=0.195  Sum_probs=144.7

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      |......+.|++|||||+|+||++++++|+++|+ +|++.+|+......        . ++.++.+|+++++++.++++ 
T Consensus         1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~--------~-~~~~~~~D~~~~~~~~~~~~~   70 (266)
T PRK06171          1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH--------E-NYQFVPTDVSSAEEVNHTVAE   70 (266)
T ss_pred             CcccccCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc--------C-ceEEEEccCCCHHHHHHHHHH
Confidence            4333344568999999999999999999999999 99999887644221        1 67889999999988877664 


Q ss_pred             ------CccEEEEcccCCCCC-------------CCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceec
Q 020110           80 ------GCKGVFHVASPCTLE-------------DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIV  136 (331)
Q Consensus        80 ------~~d~vih~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~  136 (331)
                            .+|+|||+||.....             ...++....+++|+.++..+++++...    +..++|++||.....
T Consensus        71 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  150 (266)
T PRK06171         71 IIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE  150 (266)
T ss_pred             HHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC
Confidence                  479999999964321             122334668899999999999887643    345799999975544


Q ss_pred             cCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCccc-CCCCCCCCC--------
Q 020110          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCL-GPLMQPYLN--------  204 (331)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~-G~~~~~~~~--------  204 (331)
                      +.++.                    ..|+.+|...+.+.+.++.+   .|+++++++||.+. .+.......        
T Consensus       151 ~~~~~--------------------~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~  210 (266)
T PRK06171        151 GSEGQ--------------------SCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRG  210 (266)
T ss_pred             CCCCC--------------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccC
Confidence            32221                    37999999999999888755   48999999999885 222110000        


Q ss_pred             -hhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          205 -ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       205 -~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                       ........+......    ....+...+|+|.++..++...
T Consensus       211 ~~~~~~~~~~~~~~~~----p~~r~~~~~eva~~~~fl~s~~  248 (266)
T PRK06171        211 ITVEQLRAGYTKTSTI----PLGRSGKLSEVADLVCYLLSDR  248 (266)
T ss_pred             CCHHHHHhhhcccccc----cCCCCCCHHHhhhheeeeeccc
Confidence             000111111110011    1234577899999999988653

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.6e-18  Score=142.04  Aligned_cols=190  Identities=17%  Similarity=0.132  Sum_probs=140.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh---c--CccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV---E--GCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~--~~d~   83 (331)
                      |++++||||+|+||++++++|++.|+ +|++++|+......+...      +++++.+|+++.+++.+++   .  .+|+
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~~~d~   73 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQAL------GAEALALDVADPASVAGLAWKLDGEALDA   73 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc------cceEEEecCCCHHHHHHHHHHhcCCCCCE
Confidence            57999999999999999999999999 999999876544433322      5678999999998888754   2  3799


Q ss_pred             EEEcccCCCCC------CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           84 VFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        84 vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      |||+++.....      ...+++...++.|+.++.++++++...   ...++|++||....++....           .+
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------~~  142 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG-----------TT  142 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC-----------CC
Confidence            99999876321      123345778999999999999988642   23479999986554432111           00


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHHc-CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  233 (331)
                            ...|+.+|...+.+++.++.+. +++++.++|+.+..+....                        ...+..++
T Consensus       143 ------~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~------------------------~~~~~~~~  192 (222)
T PRK06953        143 ------GWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGGA------------------------QAALDPAQ  192 (222)
T ss_pred             ------ccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCC------------------------CCCCCHHH
Confidence                  1269999999999999887554 7899999999988775221                        11356688


Q ss_pred             HHHHHHHhhcCCC
Q 020110          234 VAKAQVLLFESPA  246 (331)
Q Consensus       234 ~a~a~~~~l~~~~  246 (331)
                      .+..+..++....
T Consensus       193 ~~~~~~~~~~~~~  205 (222)
T PRK06953        193 SVAGMRRVIAQAT  205 (222)
T ss_pred             HHHHHHHHHHhcC
Confidence            8888888776543

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.81  E-value=2.6e-18  Score=144.84  Aligned_cols=205  Identities=20%  Similarity=0.189  Sum_probs=139.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC-CCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~-~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      |++|||||+|+||++++++|+++|+ +|+++.|+ ........ +...... ++.++.+|+.+++++.++++       .
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGF-DFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCC-ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999 99988873 22211111 1111112 68899999999988776664       4


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+|+.....    ...+++...++.|+.++..+++++    ++.+.+++|++||.....+..+.           
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~-----------  147 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQ-----------  147 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCc-----------
Confidence            79999999865421    122334667889999988765554    45567799999986544332221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+++.++++   .+++++.++|+.+.++.....   ....+..+..+.+      ...+.
T Consensus       148 ---------~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~------~~~~~  209 (242)
T TIGR01829       148 ---------TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAM---REDVLNSIVAQIP------VGRLG  209 (242)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccccc---chHHHHHHHhcCC------CCCCc
Confidence                     26999999888888777644   489999999999998764321   1122222222221      12355


Q ss_pred             eHHHHHHHHHHhhcCC
Q 020110          230 PVKDVAKAQVLLFESP  245 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~  245 (331)
                      ..+|+++++.+++..+
T Consensus       210 ~~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       210 RPEEIAAAVAFLASEE  225 (242)
T ss_pred             CHHHHHHHHHHHcCch
Confidence            6799999988777653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.81  E-value=3.2e-18  Score=141.56  Aligned_cols=205  Identities=20%  Similarity=0.212  Sum_probs=150.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC-CCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++++++|||||+.||..++++|.++|+ +|+.+.|+......+..... ..+..++++.+|+++++++.++.+       
T Consensus         5 ~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           5 KGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            367999999999999999999999999 99999998776554443221 222368899999999998887764       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      .+|++|||||+....    ...+...+++++|+.++..|..+.    .+.+-..+|.++|..+..+.+..          
T Consensus        84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~----------  153 (265)
T COG0300          84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYM----------  153 (265)
T ss_pred             cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcch----------
Confidence            489999999987653    233445788999999888877765    34456789999998665544332          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHH---HHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.||...-.+-....   +..|++++.+-||.+..+....             .+.........+-+
T Consensus       154 ----------avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-------------~~~~~~~~~~~~~~  210 (265)
T COG0300         154 ----------AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-------------KGSDVYLLSPGELV  210 (265)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-------------cccccccccchhhc
Confidence                      369999988776665554   3458999999999888775421             00001111123557


Q ss_pred             eeHHHHHHHHHHhhcCCC
Q 020110          229 VPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~  246 (331)
                      +..+|+|+..+.++....
T Consensus       211 ~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         211 LSPEDVAEAALKALEKGK  228 (265)
T ss_pred             cCHHHHHHHHHHHHhcCC
Confidence            899999999999998654

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.3e-18  Score=151.98  Aligned_cols=184  Identities=20%  Similarity=0.135  Sum_probs=131.8

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCC-CCCcEEEEEccCCCchHHHHHhc----
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      ..++|+++||||+|+||.+++++|+++|+ +|++..|+........ ++... .+.++.++.+|+++.+++.++++    
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 9999999765432221 11111 11268899999999998887764    


Q ss_pred             ---CccEEEEcccCCCCC---CCCCchhhhhHHHHHHHHHHHHHHHh---CCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 ---GCKGVFHVASPCTLE---DPVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                         .+|++||+||.....   ...+..+..+++|+.+...+.+.+..   .+..++|++||....++....  ..+.++.
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~--~~~~~~~  167 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINW--DDLNWER  167 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCc--ccccccc
Confidence               379999999976431   23355677899999998888776642   234589999997554432221  1222222


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH-----cCCeEEEEcCCcccCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPL  198 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lR~~~v~G~~  198 (331)
                      ...+.      ..|+.||...+.+.+.++++     .|+++..+.||.+..+.
T Consensus       168 ~~~~~------~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~  214 (313)
T PRK05854        168 SYAGM------RAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL  214 (313)
T ss_pred             cCcch------hhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence            22222      37999999999999888753     47999999999997764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.80  E-value=7.9e-18  Score=141.32  Aligned_cols=203  Identities=20%  Similarity=0.147  Sum_probs=141.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc-hhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      |++|||||+|+||++++++|+++|+ +|++++|++.... .+...      ++.++.+|+++++++.++++       .+
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   75 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQA------GAQCIQADFSTNAGIMAFIDELKQHTDGL   75 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHc------CCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence            5899999999999999999999999 9999998764321 11111      46788999999988776653       37


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CC--CCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FG--VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      |++||+|+......    ..++....+++|+.++..+.+++..    .+  ..++|++||.....+.+.           
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~-----------  144 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDK-----------  144 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCC-----------
Confidence            99999998653321    2234577889999998877766543    22  357999998643222111           


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ...|+.+|...+.+.+.++++.  ++++.+++|+.+..+....     ...........+.      .-+.
T Consensus       145 ---------~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~-----~~~~~~~~~~~~~------~~~~  204 (236)
T PRK06483        145 ---------HIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD-----AAYRQKALAKSLL------KIEP  204 (236)
T ss_pred             ---------CccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC-----HHHHHHHhccCcc------ccCC
Confidence                     1379999999999999998764  5999999999885432111     1111122221111      1245


Q ss_pred             eHHHHHHHHHHhhcCCCCCce
Q 020110          230 PVKDVAKAQVLLFESPAASGR  250 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~~~g~  250 (331)
                      ..+|+++++.+++......|.
T Consensus       205 ~~~~va~~~~~l~~~~~~~G~  225 (236)
T PRK06483        205 GEEEIIDLVDYLLTSCYVTGR  225 (236)
T ss_pred             CHHHHHHHHHHHhcCCCcCCc
Confidence            689999999999875555664

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.80  E-value=9.1e-19  Score=147.71  Aligned_cols=163  Identities=19%  Similarity=0.158  Sum_probs=121.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---------   79 (331)
                      ||++|||||+|+||++++++|+++|+ +|++++|+.....  ...   .+.++.++.+|+++.+++.+++.         
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~-~v~~~~r~~~~~~--~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGI-AVLGVARSRHPSL--AAA---AGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCC-EEEEEecCcchhh--hhc---cCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            56999999999999999999999999 9999998754321  111   11268899999999988877432         


Q ss_pred             --CccEEEEcccCCCCCC-----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 --GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                        .+|++||+|+......     ..+.+...+++|+.++..+.+.+..    .+.+++|++||.....+.++.       
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------  147 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGW-------  147 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCc-------
Confidence              3689999998754311     1233467789999997776665543    345689999997543322211       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH--cCCeEEEEcCCcccCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGP  197 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~--~~~~~~~lR~~~v~G~  197 (331)
                                   ..|+.+|...|.+++.++.+  .++++.+++|+.+-++
T Consensus       148 -------------~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        148 -------------SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence                         37999999999999988754  5899999999988554

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.80  E-value=5e-18  Score=144.60  Aligned_cols=222  Identities=14%  Similarity=0.086  Sum_probs=143.9

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC-ccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      ..+.|++|||||+|+||++++++|++.|+ +|++..|+.. ...... .+....+.++.++.+|++|++++.++++    
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 9888765432 211111 1111112268899999999988877764    


Q ss_pred             ---CccEEEEcccCCCC----------CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCC
Q 020110           80 ---GCKGVFHVASPCTL----------EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWK  142 (331)
Q Consensus        80 ---~~d~vih~a~~~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  142 (331)
                         ++|++||+|+....          ....+.....+++|+.+...+.+.+.    +.+.+++|++||.....+.+.. 
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  162 (260)
T PRK08416         84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENY-  162 (260)
T ss_pred             hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCc-
Confidence               47999999985421          01122345677888887776655543    3344689999996443222211 


Q ss_pred             CccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCC
Q 020110          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (331)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (331)
                                         ..|+.+|...+.+.+.++.+.   |++++.+.||.+-.+....... ............+ 
T Consensus       163 -------------------~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~-~~~~~~~~~~~~~-  221 (260)
T PRK08416        163 -------------------AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN-YEEVKAKTEELSP-  221 (260)
T ss_pred             -------------------ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC-CHHHHHHHHhcCC-
Confidence                               379999999999999888664   8999999999887664221101 1111111111111 


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                           ...+..++|++.++++++...  ...|.+ .+.+
T Consensus       222 -----~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdg  255 (260)
T PRK08416        222 -----LNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDG  255 (260)
T ss_pred             -----CCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcC
Confidence                 123678999999999988653  235544 4433

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=4.7e-18  Score=143.72  Aligned_cols=201  Identities=17%  Similarity=0.169  Sum_probs=139.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCC--CchHHHHHh-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVL--DSGAVSRAV-----   78 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~--~~~~~~~~~-----   78 (331)
                      ...|+||||||+|+||.+++++|++.|+ +|++++|+......+.. +......++.++.+|+.  +++++.+++     
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            3467999999999999999999999999 99999998654333221 11111115667778886  444444333     


Q ss_pred             --cCccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCcccc
Q 020110           79 --EGCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        79 --~~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                        ..+|+|||+|+....     ....+.+...+++|+.++.++++++.    +.+.++||++||.....+.+..      
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~------  162 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANW------  162 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCC------
Confidence              358999999986432     12223457789999999888888764    4567899999997544332221      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                    ..|+.+|...+.+++.++++.   ++++++++|+.+-++.......           ..      .
T Consensus       163 --------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~-----------~~------~  211 (247)
T PRK08945        163 --------------GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFP-----------GE------D  211 (247)
T ss_pred             --------------cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcC-----------cc------c
Confidence                          379999999999998877554   6889999999887653211000           00      1


Q ss_pred             CCCceeHHHHHHHHHHhhcCC
Q 020110          225 WLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      ...+...+|++..+.+++...
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        212 PQKLKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             ccCCCCHHHHHHHHHHHhCcc
Confidence            123577899999999987544

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.80  E-value=1.5e-17  Score=141.81  Aligned_cols=216  Identities=14%  Similarity=0.091  Sum_probs=142.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .++|++|||||+|.||++++++|+++|+ .|++..|+..+. .... ++..... ++.++.+|++|.+++.++++     
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGG-EAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3468999999999999999999999999 888877754321 1111 1111112 67889999999988877664     


Q ss_pred             --CccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHH----HHhCC-CCEEEEeCccceeccCCCCCCccccC
Q 020110           80 --GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEA----AKRFG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~----~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                        .+|++||+|+.......    .+.....+++|+.++..++++    +.+.+ -+++|++||.....+.+.        
T Consensus        83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~--------  154 (261)
T PRK08936         83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPL--------  154 (261)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCC--------
Confidence              47999999997543222    233456789998887765554    34443 358999998644322111        


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                  ...|+.+|...+.+.+.++.+   .++++++++|+.+.++....... ............      ..
T Consensus       155 ------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~  215 (261)
T PRK08936        155 ------------FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFA-DPKQRADVESMI------PM  215 (261)
T ss_pred             ------------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccC-CHHHHHHHHhcC------CC
Confidence                        137999998888877776544   48999999999998886432111 111111221111      12


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      ..+...+|+++++.+++...  ...|.+
T Consensus       216 ~~~~~~~~va~~~~~l~s~~~~~~~G~~  243 (261)
T PRK08936        216 GYIGKPEEIAAVAAWLASSEASYVTGIT  243 (261)
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCccCcE
Confidence            34677899999999988653  345644

>PRK06484 short chain dehydrogenase; Validated

Probab=99.79  E-value=5.8e-18  Score=158.43  Aligned_cols=219  Identities=18%  Similarity=0.167  Sum_probs=153.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ..|++|||||+|.||.+++++|.++|+ +|+++.|+......+.+..  .. ++..+.+|++|++++.++++       .
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEAL--GD-EHLSVQADITDEAAVESAFAQIQARWGR  343 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--CC-ceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 9999998765443333221  11 56778999999998887764       3


Q ss_pred             ccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           81 CKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        81 ~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      +|++||+||....     +...+++...+++|+.++.++++++...  +..++|++||..+..+.++.            
T Consensus       344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  411 (520)
T PRK06484        344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPR------------  411 (520)
T ss_pred             CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCC------------
Confidence            7999999997532     1122345778999999999999987654  34689999997654433221            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                              ..|+.+|...+.+.+.++.+.   |++++++.||.+.++...............+....+      ...+..
T Consensus       412 --------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  477 (520)
T PRK06484        412 --------NAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIP------LGRLGD  477 (520)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCC------CCCCcC
Confidence                    379999999999998887553   799999999999887532110000011112222111      123578


Q ss_pred             HHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          231 VKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       231 v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      ++|+|+++++++...  ...|. +.+.++
T Consensus       478 ~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        478 PEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            899999999988643  24554 445443

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=2.2e-17  Score=139.93  Aligned_cols=213  Identities=15%  Similarity=0.130  Sum_probs=145.9

Q ss_pred             CCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|+++||||+  +-||..++++|+++|+ +|++..|+........+...  . ++.++++|++|++++.++++      
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVD--E-EDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhcc--C-ceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            35799999999  7999999999999999 99998887322222222221  1 67889999999988876653      


Q ss_pred             -CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 -GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 -~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                       .+|++||+||....        +...++....+++|+.++..+.+++...  .-.++|++||.....+.+.        
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~--------  153 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPN--------  153 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCc--------
Confidence             47999999996532        1222345677899999998888877543  2257999998644222111        


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                             +     ..|+.+|...+.+.+.++.+   .|+++..+.||.+-.+....... ............+      .
T Consensus       154 -------~-----~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~  214 (252)
T PRK06079        154 -------Y-----NVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG-HKDLLKESDSRTV------D  214 (252)
T ss_pred             -------c-----hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC-hHHHHHHHHhcCc------c
Confidence                   1     37999999999999888755   48999999999998764321111 1111222211111      1


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      ..+...+|+|+++.+++...  ...|..
T Consensus       215 ~r~~~pedva~~~~~l~s~~~~~itG~~  242 (252)
T PRK06079        215 GVGVTIEEVGNTAAFLLSDLSTGVTGDI  242 (252)
T ss_pred             cCCCCHHHHHHHHHHHhCcccccccccE
Confidence            23678899999999988653  335543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.79  E-value=2.6e-17  Score=141.35  Aligned_cols=218  Identities=21%  Similarity=0.254  Sum_probs=159.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+|||||||||+|++++++|++.|+ +|.+..|++....... .      ++++..+|+.++..+...++++|.++++.+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~-~v~~~~r~~~~~~~~~-~------~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~   72 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGH-EVRAAVRNPEAAAALA-G------GVEVVLGDLRDPKSLVAGAKGVDGVLLISG   72 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCC-EEEEEEeCHHHHHhhc-C------CcEEEEeccCCHhHHHHHhccccEEEEEec
Confidence            4799999999999999999999999 9999999987766655 1      899999999999999999999999999887


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (331)
                      ... ..    . ...........+..+++. .++++++++|...+   ....                   ...|..+|.
T Consensus        73 ~~~-~~----~-~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~---~~~~-------------------~~~~~~~~~  123 (275)
T COG0702          73 LLD-GS----D-AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGA---DAAS-------------------PSALARAKA  123 (275)
T ss_pred             ccc-cc----c-chhHHHHHHHHHHHHHhc-CCceEEEEeccCCC---CCCC-------------------ccHHHHHHH
Confidence            543 11    1 122223333334444443 45778898886422   1110                   127999999


Q ss_pred             HHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHhhcCCCCC
Q 020110          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (331)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~~~~~~  248 (331)
                      .+|..+.    ..|++++++|+..+|......    .  .......+.+.. .+....+++.++|++.++..++..+...
T Consensus       124 ~~e~~l~----~sg~~~t~lr~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~  193 (275)
T COG0702         124 AVEAALR----SSGIPYTTLRRAAFYLGAGAA----F--IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATA  193 (275)
T ss_pred             HHHHHHH----hcCCCeEEEecCeeeeccchh----H--HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCccc
Confidence            9999998    789999999977776654321    1  122233333333 4555789999999999999999887655


Q ss_pred             c-eEEEec-cccCHHHHHHHHHHhCCCCC
Q 020110          249 G-RYLCTN-GIYQFGDFAERVSKLFPEFP  275 (331)
Q Consensus       249 g-~~~~~~-~~~s~~e~~~~i~~~~~~~~  275 (331)
                      + +|.+++ +..+..++.+.+.+.. +.+
T Consensus       194 ~~~~~l~g~~~~~~~~~~~~l~~~~-gr~  221 (275)
T COG0702         194 GRTYELAGPEALTLAELASGLDYTI-GRP  221 (275)
T ss_pred             CcEEEccCCceecHHHHHHHHHHHh-CCc
Confidence            5 675554 5799999999999998 444

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8e-18  Score=144.34  Aligned_cols=207  Identities=18%  Similarity=0.116  Sum_probs=138.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      |+++||||+|+||.+++++|+++|+ +|++++|+........ ++.......+.++.+|+++++++.++++       ++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            4799999999999999999999999 9999988764322221 1111111134567899999988776654       37


Q ss_pred             cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh-----CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        82 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      |+|||+||.....    ...++....+++|+.++.++++++..     ....++|++||..+..+.+..           
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~-----------  148 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWH-----------  148 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCC-----------
Confidence            9999999865432    12233467899999999999998642     223689999987443322221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCC----ChhHHHHHHHHcCCCCccCcCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYL----NASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                               ..|+.+|...+.+.+..+.   .+++++++++||.+.++......    ............       ...
T Consensus       149 ---------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~  212 (272)
T PRK07832        149 ---------AAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD-------RFR  212 (272)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH-------hcc
Confidence                     3699999877777766553   46899999999999987532210    000000111100       012


Q ss_pred             CCceeHHHHHHHHHHhhcC
Q 020110          226 LGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~  244 (331)
                      ...+..+|+|++++.++..
T Consensus       213 ~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        213 GHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             cCCCCHHHHHHHHHHHHhc
Confidence            2357899999999999953

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.79  E-value=7.3e-18  Score=141.81  Aligned_cols=202  Identities=21%  Similarity=0.208  Sum_probs=141.8

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-------Ccc
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   82 (331)
                      ||||||+|+||.+++++|+++|+ +|+++.|.... ..... ++..... ++.++.+|+++.+++.++++       .+|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGF-EICVHYHSGRSDAESVVSAIQAQGG-NARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCC-eEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999 89888765322 11111 1111122 68899999999988877664       369


Q ss_pred             EEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH-----hCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           83 GVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK-----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        83 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      ++||+++.....    ...+++...++.|+.++.++++++.     +.+.+++|++||..++++.++.            
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~------------  146 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQ------------  146 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCC------------
Confidence            999999875432    2234457789999999999988652     2345689999997666654332            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                              ..|+.+|...+.+.+.++.+   .+++++.++|+.+.++.....    ...........+      ...+..
T Consensus       147 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~------~~~~~~  208 (239)
T TIGR01831       147 --------VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV----EHDLDEALKTVP------MNRMGQ  208 (239)
T ss_pred             --------cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh----hHHHHHHHhcCC------CCCCCC
Confidence                    27999999888888776644   489999999999988764321    111112211111      123567


Q ss_pred             HHHHHHHHHHhhcCC
Q 020110          231 VKDVAKAQVLLFESP  245 (331)
Q Consensus       231 v~D~a~a~~~~l~~~  245 (331)
                      .+|+++++.+++...
T Consensus       209 ~~~va~~~~~l~~~~  223 (239)
T TIGR01831       209 PAEVASLAGFLMSDG  223 (239)
T ss_pred             HHHHHHHHHHHcCch
Confidence            899999999988754

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=4.7e-18  Score=142.87  Aligned_cols=203  Identities=18%  Similarity=0.194  Sum_probs=140.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++++||||||+|+||+++++.|++.|+ +|++++|+......+.......+ ++.++.+|+++++++.++++       .
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYG-NIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            357999999999999999999999999 99999997654433311111112 67889999999988876654       3


Q ss_pred             ccEEEEcccCCCCCC--CCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCChhh
Q 020110           81 CKGVFHVASPCTLED--PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (331)
Q Consensus        81 ~d~vih~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (331)
                      +|.+||+++......  ..+.....++.|+.+...+++.+...  ...++|++||..+.++...                
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~----------------  145 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASP----------------  145 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCC----------------
Confidence            699999998543211  11223566889999888888876543  2257999998644221100                


Q ss_pred             hhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHH
Q 020110          157 CKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (331)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  233 (331)
                         +...|+.+|...+.+++.++++   .+++++++||++++++.....   .   ....        .......+..+|
T Consensus       146 ---~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~---~---~~~~--------~~~~~~~~~~~~  208 (238)
T PRK05786        146 ---DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER---N---WKKL--------RKLGDDMAPPED  208 (238)
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh---h---hhhh--------ccccCCCCCHHH
Confidence               1126999999999888877654   489999999999999753210   0   0000        001123577899


Q ss_pred             HHHHHHHhhcCC
Q 020110          234 VAKAQVLLFESP  245 (331)
Q Consensus       234 ~a~a~~~~l~~~  245 (331)
                      +++++..++...
T Consensus       209 va~~~~~~~~~~  220 (238)
T PRK05786        209 FAKVIIWLLTDE  220 (238)
T ss_pred             HHHHHHHHhccc
Confidence            999999998754

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.8e-17  Score=141.83  Aligned_cols=215  Identities=20%  Similarity=0.195  Sum_probs=144.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC---------Cccchh-hcCCCCCCCcEEEEEccCCCchHHHHH
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---------SDSSHL-FALPGAGDANLRVFEADVLDSGAVSRA   77 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~---------~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~   77 (331)
                      +.|++|||||++.||++++++|++.|+ +|+++.|+.         ...... .++..... ++.++.+|++|++++.++
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGG-EAVANGDDIADWDGAANL   82 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCC-ceEEEeCCCCCHHHHHHH
Confidence            357999999999999999999999999 998887754         111111 11111122 678899999999888766


Q ss_pred             hc-------CccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHhC----C------CCEEEEeCccceec
Q 020110           78 VE-------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF----G------VRRVVVTSSISAIV  136 (331)
Q Consensus        78 ~~-------~~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~------~~~~v~~SS~~~~~  136 (331)
                      ++       .+|++||+||....    +...+++...+++|+.++..+++++...    .      -.++|++||..+..
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~  162 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ  162 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence            63       47999999997542    1223445778999999999988876421    1      24899999976654


Q ss_pred             cCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHH
Q 020110          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQL  213 (331)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  213 (331)
                      +.++.                    ..|+.+|...+.+.+.++.+   +|++++.+.|+ +..+...       ......
T Consensus       163 ~~~~~--------------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~-------~~~~~~  214 (286)
T PRK07791        163 GSVGQ--------------------GNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE-------TVFAEM  214 (286)
T ss_pred             CCCCc--------------------hhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch-------hhHHHH
Confidence            43332                    37999999999988887755   58999999997 4332211       111111


Q ss_pred             HcCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCceE-EEecc
Q 020110          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRY-LCTNG  256 (331)
Q Consensus       214 ~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~~  256 (331)
                      ....    +.....+...+|+|+++++++...  ...|.+ .+.++
T Consensus       215 ~~~~----~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  256 (286)
T PRK07791        215 MAKP----EEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGG  256 (286)
T ss_pred             HhcC----cccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCC
Confidence            1111    111123567999999999988643  345654 44443

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.78  E-value=5.8e-18  Score=144.40  Aligned_cols=208  Identities=20%  Similarity=0.127  Sum_probs=143.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++++++||||+|+||++++++|+++|+ +|++++|+......+....   +.++.++.+|+.+.+++.++++       .
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAH---GDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhc---CCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            357999999999999999999999999 9999988765433332211   1168889999999887776654       4


Q ss_pred             ccEEEEcccCCCCC-C---CC-----CchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccC
Q 020110           81 CKGVFHVASPCTLE-D---PV-----DPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        81 ~d~vih~a~~~~~~-~---~~-----~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                      +|++||+||..... .   ..     +.+...+++|+.++.++++++...   .-.++|++||...+++.++.       
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------  152 (262)
T TIGR03325        80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGG-------  152 (262)
T ss_pred             CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCC-------
Confidence            79999999864311 1   11     134578999999999999988543   12468888887554432221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCC-CChhHH-----HHHHHHcCCCCc
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPY-LNASCA-----VLQQLLQGSKDT  220 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~-~~~~~~-----~~~~~~~~~~~~  220 (331)
                                   ..|+.+|...+.+.+.++.+.  .+++..+.||.+..+..... ......     ...+..... . 
T Consensus       153 -------------~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-  217 (262)
T TIGR03325       153 -------------PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSV-L-  217 (262)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhc-C-
Confidence                         279999999999999988764  38999999999987753211 000000     011111110 1 


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcC
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                         ....+...+|+|.+++.++..
T Consensus       218 ---p~~r~~~p~eva~~~~~l~s~  238 (262)
T TIGR03325       218 ---PIGRMPDAEEYTGAYVFFATR  238 (262)
T ss_pred             ---CCCCCCChHHhhhheeeeecC
Confidence               123466789999999888865

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=1.6e-17  Score=144.70  Aligned_cols=204  Identities=18%  Similarity=0.140  Sum_probs=138.3

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cch-hhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      ..++|+++||||+|+||++++++|+++|+ +|++.+|+... ... ..++...+. ++.++.+|++|.+++.++++    
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGA-KAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 99988775322 111 111111122 68899999999988877664    


Q ss_pred             --CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC-----------CCCEEEEeCccceeccCCCCC
Q 020110           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF-----------GVRRVVVTSSISAIVPNPGWK  142 (331)
Q Consensus        80 --~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-----------~~~~~v~~SS~~~~~~~~~~~  142 (331)
                        .+|+|||+||.....    ...+++...+++|+.++.++++++...           ...++|++||.....+.++. 
T Consensus        87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  165 (306)
T PRK07792         87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQ-  165 (306)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCC-
Confidence              479999999975432    122345678999999999999876421           12489999987554332221 


Q ss_pred             CccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCC
Q 020110          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (331)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (331)
                                         ..|+.+|...+.+.+.++.+   +|+++.++.|+. ..+....       .+    ...+.
T Consensus       166 -------------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~-------~~----~~~~~  214 (306)
T PRK07792        166 -------------------ANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTAD-------VF----GDAPD  214 (306)
T ss_pred             -------------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhh-------hc----cccch
Confidence                               26999999999998887754   589999999972 2111100       00    00000


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcC
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      .. ....+.+.++|++.++.+++..
T Consensus       215 ~~-~~~~~~~~pe~va~~v~~L~s~  238 (306)
T PRK07792        215 VE-AGGIDPLSPEHVVPLVQFLASP  238 (306)
T ss_pred             hh-hhccCCCCHHHHHHHHHHHcCc
Confidence            00 0123456899999999888764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.78  E-value=3.8e-17  Score=139.16  Aligned_cols=214  Identities=14%  Similarity=0.049  Sum_probs=139.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Ccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   82 (331)
                      |++|||||+|.||+.++++|+++|+ +|++++|+..............+ ++.++.+|++|++++.++++       .+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4899999999999999999999999 99999987654332221111112 57889999999988887764       579


Q ss_pred             EEEEcccCCCC------CCCCCchhhhhHHHHHHHHHHHHHH----H-hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           83 GVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----K-RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        83 ~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~-~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++||+||....      +...++....+.+|+.++..+..++    . +.+..++|++||.....+.+.           
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~-----------  147 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPP-----------  147 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCC-----------
Confidence            99999996431      1112223445677777665554432    2 234468999999754322111           


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCC--------hhHH-HHHHHHcCCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN--------ASCA-VLQQLLQGSKD  219 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~--------~~~~-~~~~~~~~~~~  219 (331)
                               ...|+.+|...+.+.+.++.+.   |+++..+.||.+-.+.......        .... ....+...   
T Consensus       148 ---------~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  215 (259)
T PRK08340        148 ---------LVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER---  215 (259)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc---
Confidence                     1379999999999999888654   7999999999987764311000        0000 00111111   


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                       .  ....+...+|+|+++.+++...  ...|..
T Consensus       216 -~--p~~r~~~p~dva~~~~fL~s~~~~~itG~~  246 (259)
T PRK08340        216 -T--PLKRTGRWEELGSLIAFLLSENAEYMLGST  246 (259)
T ss_pred             -C--CccCCCCHHHHHHHHHHHcCcccccccCce
Confidence             1  1233678899999999988754  345543

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.7e-17  Score=140.29  Aligned_cols=208  Identities=19%  Similarity=0.174  Sum_probs=144.4

Q ss_pred             CCeEEEeCcch-HHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCC-CCCCcEEEEEccCCCchHHHHHhc------
Q 020110            9 EETVCVTGANG-FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG-AGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         9 ~~~vlVtGatG-~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .+++|||||+| -||+++++.|+++|+ +|++.+|+........+ +.. ....++.++++|+++++++.++++      
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   95 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL   95 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            57999999998 599999999999999 99998887644322221 111 011168889999999988877664      


Q ss_pred             -CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CC-CCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                       .+|+|||+|+......    ..+.....+++|+.++..+++++..    .+ ..++|++||.....+.++         
T Consensus        96 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~---------  166 (262)
T PRK07831         96 GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHG---------  166 (262)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC---------
Confidence             4799999999644221    1233566788999999988887643    22 457889888644322111         


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                 ...|+.+|...+.+.+.++.+   +++++++++|+.+..+......  .......+....+      ..
T Consensus       167 -----------~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~--~~~~~~~~~~~~~------~~  227 (262)
T PRK07831        167 -----------QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT--SAELLDELAAREA------FG  227 (262)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc--CHHHHHHHHhcCC------CC
Confidence                       137999999999999998865   5899999999999988542211  1122222222221      23


Q ss_pred             CceeHHHHHHHHHHhhcCC
Q 020110          227 GAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~  245 (331)
                      -+...+|+++++++++...
T Consensus       228 r~~~p~~va~~~~~l~s~~  246 (262)
T PRK07831        228 RAAEPWEVANVIAFLASDY  246 (262)
T ss_pred             CCcCHHHHHHHHHHHcCch
Confidence            3667899999999988754

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.5e-17  Score=134.60  Aligned_cols=179  Identities=19%  Similarity=0.178  Sum_probs=133.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---CccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vih   86 (331)
                      |+++||||+|.||.+++++|.++ + +|+++.|+..                 .+.+|++++++++++++   ++|++||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~~~id~lv~   61 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-H-EVITAGRSSG-----------------DVQVDITDPASIRALFEKVGKVDAVVS   61 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCC-----------------ceEecCCChHHHHHHHHhcCCCCEEEE
Confidence            38999999999999999999999 8 9999988642                 35799999998888776   5899999


Q ss_pred             cccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhcc
Q 020110           87 VASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (331)
Q Consensus        87 ~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (331)
                      +||......    ..++....+++|+.++.++++++...  +..+++++||..+..+.++.                   
T Consensus        62 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~-------------------  122 (199)
T PRK07578         62 AAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGG-------------------  122 (199)
T ss_pred             CCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCc-------------------
Confidence            998654321    22345667889999999999987643  33579999986543322221                   


Q ss_pred             CcchhHHHHHHHHHHHHHHHH--cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHH
Q 020110          161 KKWYPVSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQ  238 (331)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~  238 (331)
                       ..|+.+|...+.+.+.++.+  .|+++..+.|+.+-.+....              +...    ....++..+|+|+++
T Consensus       123 -~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~--------------~~~~----~~~~~~~~~~~a~~~  183 (199)
T PRK07578        123 -ASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKY--------------GPFF----PGFEPVPAARVALAY  183 (199)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhh--------------hhcC----CCCCCCCHHHHHHHH
Confidence             37999999999999888765  58999999999875432100              0000    112468999999999


Q ss_pred             HHhhcCC
Q 020110          239 VLLFESP  245 (331)
Q Consensus       239 ~~~l~~~  245 (331)
                      ..++...
T Consensus       184 ~~~~~~~  190 (199)
T PRK07578        184 VRSVEGA  190 (199)
T ss_pred             HHHhccc
Confidence            9998754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=5.2e-17  Score=138.94  Aligned_cols=214  Identities=14%  Similarity=0.098  Sum_probs=143.1

Q ss_pred             CCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .|.+|||||++  .||+.++++|+++|+ +|++..|+........++....+ ...++.+|++|++++.++++       
T Consensus         7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          7 GKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            57899999997  999999999999999 99988876432222222211111 23468899999988877764       


Q ss_pred             CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 ~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                      .+|++||+||....        +...+++...+++|+.++.++++++...  .-.++|++||..+..+.+..        
T Consensus        85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~--------  156 (271)
T PRK06505         85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNY--------  156 (271)
T ss_pred             CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCcc--------
Confidence            47999999996531        1223445778899999999888876432  22589999987543322211        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                  ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+..... ..............+      ..
T Consensus       157 ------------~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~-~~~~~~~~~~~~~~p------~~  217 (271)
T PRK06505        157 ------------NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGI-GDARAIFSYQQRNSP------LR  217 (271)
T ss_pred             ------------chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccC-cchHHHHHHHhhcCC------cc
Confidence                        37999999999999888765   479999999999987643211 100011111111111      12


Q ss_pred             CceeHHHHHHHHHHhhcCCC--CCceE
Q 020110          227 GAVPVKDVAKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~~--~~g~~  251 (331)
                      .+...+|+|+++++++....  ..|..
T Consensus       218 r~~~peeva~~~~fL~s~~~~~itG~~  244 (271)
T PRK06505        218 RTVTIDEVGGSALYLLSDLSSGVTGEI  244 (271)
T ss_pred             ccCCHHHHHHHHHHHhCccccccCceE
Confidence            34678999999999886432  35644

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.3e-17  Score=160.52  Aligned_cols=198  Identities=18%  Similarity=0.197  Sum_probs=145.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|+++||||+|+||.+++++|+++|+ +|++++|+......... +..... ++.++.+|++|.+++.++++       
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGG-TAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            357899999999999999999999999 99999997654333221 111112 68899999999998887775       


Q ss_pred             CccEEEEcccCCCCCC---C---CCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 GCKGVFHVASPCTLED---P---VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~---~---~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                      ++|++||+||......   .   .++....+++|+.++.++++++    ++.+.+++|++||..++.+.+..        
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  519 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRF--------  519 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCc--------
Confidence            5899999999653211   1   1235678999999998887765    34466799999997554332221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                  ..|+.+|...+.+.+.++.+   .++++++++||.+.++...+...                +  ...
T Consensus       520 ------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~----------------~--~~~  569 (657)
T PRK07201        520 ------------SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR----------------Y--NNV  569 (657)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc----------------c--cCC
Confidence                        37999999999999887654   48999999999998875432100                0  012


Q ss_pred             CceeHHHHHHHHHHhhcCC
Q 020110          227 GAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~  245 (331)
                      ..+..+++|+.++..+...
T Consensus       570 ~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        570 PTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             CCCCHHHHHHHHHHHHHhC
Confidence            3578999999999887643

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=3.8e-17  Score=139.14  Aligned_cols=214  Identities=14%  Similarity=0.146  Sum_probs=141.3

Q ss_pred             CCeEEEeCc--chHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .|++|||||  ++.||+++++.|+++|+ +|++..|+......+.++....+ ....+++|++|++++.++++       
T Consensus         6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          6 GKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             CcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            579999997  67999999999999999 99887665322223333322212 34578999999998887764       


Q ss_pred             CccEEEEcccCCCCC---------CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ~~d~vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                      .+|++||+||.....         ...+.....+++|+.++..+.+++...   +-.++|++||.....+.++.      
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~------  157 (261)
T PRK08690         84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNY------  157 (261)
T ss_pred             CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCc------
Confidence            479999999975421         011223556788988888887765432   22579999987543322221      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                    ..|+.+|...+.+.+.++.   .+|+++..+.||.+-.+.... ..........+....+      
T Consensus       158 --------------~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~-~~~~~~~~~~~~~~~p------  216 (261)
T PRK08690        158 --------------NVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG-IADFGKLLGHVAAHNP------  216 (261)
T ss_pred             --------------ccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc-CCchHHHHHHHhhcCC------
Confidence                          3799999999988887764   358999999999997764221 1101111111111111      


Q ss_pred             CCCceeHHHHHHHHHHhhcCCC--CCceE
Q 020110          225 WLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~~--~~g~~  251 (331)
                      ...+..++|+|+++.+++....  ..|..
T Consensus       217 ~~r~~~peevA~~v~~l~s~~~~~~tG~~  245 (261)
T PRK08690        217 LRRNVTIEEVGNTAAFLLSDLSSGITGEI  245 (261)
T ss_pred             CCCCCCHHHHHHHHHHHhCcccCCcceeE
Confidence            2346788999999999987542  35543

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.77  E-value=3.5e-17  Score=139.86  Aligned_cols=218  Identities=18%  Similarity=0.102  Sum_probs=142.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCC-CCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.|++|||||+|+||++++++|+++|+ +|++++|+......... +... .+.++.++.+|++|.+++.++++      
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF   85 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            457999999999999999999999999 99999997654332221 1111 11167789999999988876654      


Q ss_pred             -CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       .+|++||+||......    ..+.+...+++|+.+...+++++    ++.+..++|++||..+..+.+..         
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  156 (265)
T PRK07062         86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHM---------  156 (265)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCc---------
Confidence             4799999999754211    22235667888988877776655    33445689999997553322211         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC-------hhHHHHHHHHcCCCCc
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-------ASCAVLQQLLQGSKDT  220 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~-------~~~~~~~~~~~~~~~~  220 (331)
                                 ..|+.+|...+.+.+.++.+   .|++++.++||.+-.+.......       ....+.......... 
T Consensus       157 -----------~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  224 (265)
T PRK07062        157 -----------VATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGI-  224 (265)
T ss_pred             -----------hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCC-
Confidence                       26999999888877766644   58999999999997764211000       000111111100111 


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCC--CCCce
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGR  250 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~  250 (331)
                         ....+...+|+|.++.+++...  ...|.
T Consensus       225 ---p~~r~~~p~~va~~~~~L~s~~~~~~tG~  253 (265)
T PRK07062        225 ---PLGRLGRPDEAARALFFLASPLSSYTTGS  253 (265)
T ss_pred             ---CcCCCCCHHHHHHHHHHHhCchhcccccc
Confidence               1234677899999999887643  23553

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.2e-17  Score=139.15  Aligned_cols=167  Identities=19%  Similarity=0.224  Sum_probs=123.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-----CccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~   83 (331)
                      ||+|+||||+|+||++++++|+++|+ +|++++|++.....+.+.    . ++.++.+|++|++++.++++     ++|+
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~----~-~~~~~~~D~~d~~~~~~~~~~~~~~~id~   74 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQAL----P-GVHIEKLDMNDPASLDQLLQRLQGQRFDL   74 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhc----c-ccceEEcCCCCHHHHHHHHHHhhcCCCCE
Confidence            57899999999999999999999999 999999987654444332    1 57788899999988877665     4899


Q ss_pred             EEEcccCCCCC------CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           84 VFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        84 vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      |||+|+.....      ...++....+++|+.++..+++++...   +...++++||..+..+.+.      .     . 
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~------~-----~-  142 (225)
T PRK08177         75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPD------G-----G-  142 (225)
T ss_pred             EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCC------C-----C-
Confidence            99999875321      112334667888999999998887543   2357888887522211100      0     0 


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCC
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPL  198 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~  198 (331)
                           ....|+.+|...+.+++.++.+   ++++++.++||.+-.+.
T Consensus       143 -----~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        143 -----EMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             -----CccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence                 1126999999999999988755   46999999999987765

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=6.2e-17  Score=137.65  Aligned_cols=215  Identities=13%  Similarity=0.076  Sum_probs=144.6

Q ss_pred             CCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.|++|||||+  +-||.+++++|+++|+ +|++..|+......+.++....+ .+.++.+|++|++++.++++      
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELD-APIFLPLDVREPGQLEAVFARIAEEW   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHHHHc
Confidence            45799999998  5999999999999999 99988887543222222211111 34578899999988877663      


Q ss_pred             -CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 -GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 -~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                       .+|++|||||....        +...++....+++|+.++..+.+++...  .-.++|++||.....+.+.        
T Consensus        87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~--------  158 (258)
T PRK07533         87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVEN--------  158 (258)
T ss_pred             CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCcc--------
Confidence             47999999986432        1122345778999999999998877543  2247999998643221111        


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                             +     ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+..... ..............+      .
T Consensus       159 -------~-----~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~  219 (258)
T PRK07533        159 -------Y-----NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI-DDFDALLEDAAERAP------L  219 (258)
T ss_pred             -------c-----hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc-CCcHHHHHHHHhcCC------c
Confidence                   1     36999999999988887754   489999999999977643211 111111222222111      2


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      ..+...+|+++++++++...  ...|..
T Consensus       220 ~r~~~p~dva~~~~~L~s~~~~~itG~~  247 (258)
T PRK07533        220 RRLVDIDDVGAVAAFLASDAARRLTGNT  247 (258)
T ss_pred             CCCCCHHHHHHHHHHHhChhhccccCcE
Confidence            23678899999999988653  345543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=6.6e-17  Score=137.32  Aligned_cols=217  Identities=15%  Similarity=0.112  Sum_probs=143.7

Q ss_pred             cCCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCC-CCCcEEEEEccCCCchHHHHHhc----
Q 020110            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         7 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      .+.|+++||||+  +-||.+++++|.++|+ +|++..|+......+.++... .+.++.++.+|++|++++.++++    
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            345799999997  8999999999999999 999887754322222222111 11268889999999998877664    


Q ss_pred             ---CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccc
Q 020110           80 ---GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 ---~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                         .+|++||+|+....        +...+.....+++|+.+...+.+++...  .-.++|++||..+..+.+..     
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~-----  158 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNY-----  158 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCC-----
Confidence               37999999986431        1112234567889999988888776543  22589999987543222111     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                     ..|+.+|...+.+.+.++.+   +|++++.+.||.+-.+..... ..............      
T Consensus       159 ---------------~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~------  216 (257)
T PRK08594        159 ---------------NVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGV-GGFNSILKEIEERA------  216 (257)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhh-ccccHHHHHHhhcC------
Confidence                           37999999999999888754   479999999999977632110 00001111111110      


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCC--CCceE
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~--~~g~~  251 (331)
                      ....+...+|+++++++++....  ..|..
T Consensus       217 p~~r~~~p~~va~~~~~l~s~~~~~~tG~~  246 (257)
T PRK08594        217 PLRRTTTQEEVGDTAAFLFSDLSRGVTGEN  246 (257)
T ss_pred             CccccCCHHHHHHHHHHHcCcccccccceE
Confidence            12335778999999999886533  35644

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.77  E-value=7.4e-17  Score=137.96  Aligned_cols=205  Identities=17%  Similarity=0.144  Sum_probs=133.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC-Cccchh-hcCCCCCCCcEEEEEccCCCchHHH----HHh-----
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHL-FALPGAGDANLRVFEADVLDSGAVS----RAV-----   78 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~----~~~-----   78 (331)
                      +.++||||+|+||++++++|+++|+ +|+++.|+. .....+ .++....+.++.++.+|++|.+++.    +++     
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGY-RVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            4799999999999999999999999 999876543 222221 1121111115667899999987543    332     


Q ss_pred             --cCccEEEEcccCCCCCCC----CC-----------chhhhhHHHHHHHHHHHHHHHhCC----------CCEEEEeCc
Q 020110           79 --EGCKGVFHVASPCTLEDP----VD-----------PEKELILPAVQGTLNVLEAAKRFG----------VRRVVVTSS  131 (331)
Q Consensus        79 --~~~d~vih~a~~~~~~~~----~~-----------~~~~~~~~n~~~~~~l~~~~~~~~----------~~~~v~~SS  131 (331)
                        .++|+|||+||.......    ..           .....+++|+.++..+++++....          ..++|++||
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence              258999999996543111    11           134679999999999988764321          135777776


Q ss_pred             cceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHH
Q 020110          132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCA  208 (331)
Q Consensus       132 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~  208 (331)
                      .....+.+                    ....|+.+|...+.+.+.++.+   .|++++.++|+.+..+...+.     .
T Consensus       161 ~~~~~~~~--------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~-----~  215 (267)
T TIGR02685       161 AMTDQPLL--------------------GFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF-----E  215 (267)
T ss_pred             hhccCCCc--------------------ccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch-----h
Confidence            53321111                    1137999999999999988766   589999999999876642110     1


Q ss_pred             HHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          209 VLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      .........+  .   ...+...+|++++++.++...
T Consensus       216 ~~~~~~~~~~--~---~~~~~~~~~va~~~~~l~~~~  247 (267)
T TIGR02685       216 VQEDYRRKVP--L---GQREASAEQIADVVIFLVSPK  247 (267)
T ss_pred             HHHHHHHhCC--C---CcCCCCHHHHHHHHHHHhCcc
Confidence            1111111111  1   123468899999999988754

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=2.1e-16  Score=134.35  Aligned_cols=212  Identities=18%  Similarity=0.124  Sum_probs=140.3

Q ss_pred             cCCCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCCCc--------cc---hhhcCCCCCCCcEEEEEccCCCchH
Q 020110            7 KEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSD--------SS---HLFALPGAGDANLRVFEADVLDSGA   73 (331)
Q Consensus         7 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~--------~~---~~~~~~~~~~~~~~~~~~Dl~~~~~   73 (331)
                      .++|+||||||+|  .||++++++|++.|+ +|++..|....        ..   ...+.....+.++.++.+|+++.++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~-~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGA-DIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            4467999999995  799999999999999 88887542110        01   1111011112268889999999998


Q ss_pred             HHHHhc-------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccC
Q 020110           74 VSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPN  138 (331)
Q Consensus        74 ~~~~~~-------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~  138 (331)
                      +.++++       .+|++||+|+.....    ...+.....+++|+.+...+.+++    ++.+..++|++||.....+.
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM  162 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC
Confidence            887764       369999999865431    122334667999999988886544    33334589999997543222


Q ss_pred             CCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHc
Q 020110          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ  215 (331)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~  215 (331)
                      ++                    ...|+.+|...+.+.+.++.+   ++++++.++|+.+-++....      .....+..
T Consensus       163 ~~--------------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~------~~~~~~~~  216 (256)
T PRK12859        163 VG--------------------ELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE------EIKQGLLP  216 (256)
T ss_pred             CC--------------------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH------HHHHHHHh
Confidence            11                    137999999999998887755   58999999999887653211      11111111


Q ss_pred             CCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       216 ~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      ..+      ...+...+|+++++.+++...  ...|.+
T Consensus       217 ~~~------~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  248 (256)
T PRK12859        217 MFP------FGRIGEPKDAARLIKFLASEEAEWITGQI  248 (256)
T ss_pred             cCC------CCCCcCHHHHHHHHHHHhCccccCccCcE
Confidence            111      123467899999999887653  235544

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=1.2e-16  Score=135.95  Aligned_cols=214  Identities=14%  Similarity=0.102  Sum_probs=142.2

Q ss_pred             CCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .|+++||||++  -||+++++.|+++|+ +|+...|+.......+++....+ .+.++.+|++|+++++++++       
T Consensus         6 ~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          6 GKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG-SDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             CCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccC-CceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            57999999985  899999999999999 99888876321222333322222 46678899999998887764       


Q ss_pred             CccEEEEcccCCCCCC---------CCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 GCKGVFHVASPCTLED---------PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                      .+|++||+||......         ..+.+...+++|+.+...+.+++...  .-.++|++||.....+.++        
T Consensus        84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~--------  155 (262)
T PRK07984         84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN--------  155 (262)
T ss_pred             CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCC--------
Confidence            3799999999643211         11233566888999988888876432  2257999998644222111        


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                             +     ..|+.+|...+.+.+.++.+   +++++..+.||.+..+.... ...............      ..
T Consensus       156 -------~-----~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~~~~~~~~~~~~~------p~  216 (262)
T PRK07984        156 -------Y-----NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG-IKDFRKMLAHCEAVT------PI  216 (262)
T ss_pred             -------c-----chhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhc-CCchHHHHHHHHHcC------CC
Confidence                   1     37999999999999988765   48999999999997753211 000111111111111      12


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      ..+..++|++.++++++...  ...|..
T Consensus       217 ~r~~~pedva~~~~~L~s~~~~~itG~~  244 (262)
T PRK07984        217 RRTVTIEDVGNSAAFLCSDLSAGISGEV  244 (262)
T ss_pred             cCCCCHHHHHHHHHHHcCcccccccCcE
Confidence            34678899999999988753  245544

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.76  E-value=1.3e-16  Score=121.52  Aligned_cols=204  Identities=17%  Similarity=0.152  Sum_probs=149.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |||.|+||||.+|+.+++..++.|| +|++++|++.+....+        ++...+.|+.|++++...+.+.|+||..-+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~--------~~~i~q~Difd~~~~a~~l~g~DaVIsA~~   71 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQ--------GVTILQKDIFDLTSLASDLAGHDAVISAFG   71 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccc--------cceeecccccChhhhHhhhcCCceEEEecc
Confidence            5899999999999999999999999 9999999988765431        678899999999999999999999998765


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (331)
                      ....    . ..   +.-......|++..+..++.|++.++.++..+-.++.    .-.+.+..|..      .|..++.
T Consensus        72 ~~~~----~-~~---~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~----rLvD~p~fP~e------y~~~A~~  133 (211)
T COG2910          72 AGAS----D-ND---ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGT----RLVDTPDFPAE------YKPEALA  133 (211)
T ss_pred             CCCC----C-hh---HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCc----eeecCCCCchh------HHHHHHH
Confidence            4321    1 11   1112235678888888899999999998777765542    22333333332      5777777


Q ss_pred             HHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCCCc
Q 020110          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG  249 (331)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g  249 (331)
                      .+|. +..+..+..++|+.+-|+.+|-|+.+.+...+        .|..+......-++|...|.|-+++-.++++....
T Consensus       134 ~ae~-L~~Lr~~~~l~WTfvSPaa~f~PGerTg~yrl--------ggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~r  204 (211)
T COG2910         134 QAEF-LDSLRAEKSLDWTFVSPAAFFEPGERTGNYRL--------GGDQLLVNAKGESRISYADYAIAVLDELEKPQHIR  204 (211)
T ss_pred             HHHH-HHHHhhccCcceEEeCcHHhcCCccccCceEe--------ccceEEEcCCCceeeeHHHHHHHHHHHHhcccccc
Confidence            7764 33444455699999999999999876542211        12222234456789999999999999998876543

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.76  E-value=7.9e-17  Score=138.25  Aligned_cols=228  Identities=19%  Similarity=0.163  Sum_probs=143.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc------Ccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------GCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d   82 (331)
                      |.++|||+ |+||++++++|. +|+ +|++++|+........ ++..... ++.++.+|++|++++.++++      .+|
T Consensus         3 k~~lItGa-~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          3 EVVVVIGA-GGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGF-DVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CEEEEECC-ChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            57899998 799999999996 899 9999998764432222 1111112 68889999999988887764      489


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCC-CC-CCccccCCCCCC-----
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNP-GW-KGKVFDETSWTD-----  153 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~-~~-~~~~~~E~~~~~-----  153 (331)
                      ++||+||....   ..++...+++|+.++.++++++...  .-+++|++||..+..... .. ....+...+...     
T Consensus        79 ~li~nAG~~~~---~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (275)
T PRK06940         79 GLVHTAGVSPS---QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLP  155 (275)
T ss_pred             EEEECCCcCCc---hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccc
Confidence            99999997532   3457889999999999999987643  123567778765543210 00 000011100000     


Q ss_pred             ---hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC-hhHHHHHHHHcCCCCccCcCCC
Q 020110          154 ---LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       154 ---~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                         +.........|+.+|...+.+.+.++.+   .|++++.+.||.+.++....... .......++....+      ..
T Consensus       156 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p------~~  229 (275)
T PRK06940        156 FLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP------AG  229 (275)
T ss_pred             cccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC------cc
Confidence               0000001247999999999888877654   47999999999998875321110 00011112211111      12


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCce
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGR  250 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~  250 (331)
                      .+...+|+|+++.+++...  ...|.
T Consensus       230 r~~~peeia~~~~fL~s~~~~~itG~  255 (275)
T PRK06940        230 RPGTPDEIAALAEFLMGPRGSFITGS  255 (275)
T ss_pred             cCCCHHHHHHHHHHHcCcccCcccCc
Confidence            3678899999999888643  33553

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.5e-16  Score=135.48  Aligned_cols=217  Identities=18%  Similarity=0.137  Sum_probs=145.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc---CccE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---GCKG   83 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   83 (331)
                      +.|+++||||+|.||+++++.|++.|+ +|++++|+......... +....+.++.++.+|+++++++.++++   .+|+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   84 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI   84 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence            357999999999999999999999999 99999987654333221 111112267889999999998887764   4899


Q ss_pred             EEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           84 VFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        84 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      +||+|+.....    ...++....+++|+.+...+++++    ++.+..++|++||.....+...               
T Consensus        85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~---------------  149 (259)
T PRK06125         85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDAD---------------  149 (259)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCC---------------
Confidence            99999865421    122334677899999998888876    3334458999998643221111               


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC-------hhHHHHHHHHcCCCCccCcCC
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-------ASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  225 (331)
                      +     ..|+.+|...+.+.+.++.+   .|++++.+.||.+.++.......       .............      ..
T Consensus       150 ~-----~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  218 (259)
T PRK06125        150 Y-----ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGL------PL  218 (259)
T ss_pred             c-----hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccC------Cc
Confidence            1     26899999999888877643   48999999999987763211000       0000111111111      11


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      ..+..++|+|++++.++...  ...|..
T Consensus       219 ~~~~~~~~va~~~~~l~~~~~~~~~G~~  246 (259)
T PRK06125        219 GRPATPEEVADLVAFLASPRSGYTSGTV  246 (259)
T ss_pred             CCCcCHHHHHHHHHHHcCchhccccCce
Confidence            23678999999999888643  235643

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=1.1e-16  Score=137.01  Aligned_cols=214  Identities=14%  Similarity=0.113  Sum_probs=142.4

Q ss_pred             CCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .|++|||||+  +-||+.+++.|.++|+ +|++..|+......+.+.....+.. ..+.+|++|.+++.++++       
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4799999997  7999999999999999 9998888742222222221111113 578899999988877664       


Q ss_pred             CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 ~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                      .+|++||+||....        +...++....+++|+.++..+.+++...  .-.++|++||.....+.+.         
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~---------  153 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPH---------  153 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCc---------
Confidence            47999999996431        1223345778999999999988877543  2258999998644322211         


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                            +     ..|+.+|...+.+.+.++.+   +|+++..+.||.+..+.... ...... ..+.... ..    ...
T Consensus       154 ------~-----~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~~~~-~~~~~~~-~~----pl~  215 (274)
T PRK08415        154 ------Y-----NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG-IGDFRM-ILKWNEI-NA----PLK  215 (274)
T ss_pred             ------c-----hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhc-cchhhH-Hhhhhhh-hC----chh
Confidence                  1     36999999999998888754   47999999999997753211 000000 0111000 01    112


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      .+...+|+|+++.+++...  ...|..
T Consensus       216 r~~~pedva~~v~fL~s~~~~~itG~~  242 (274)
T PRK08415        216 KNVSIEEVGNSGMYLLSDLSSGVTGEI  242 (274)
T ss_pred             ccCCHHHHHHHHHHHhhhhhhcccccE
Confidence            3577899999999988743  345643

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.75  E-value=1.5e-16  Score=135.17  Aligned_cols=214  Identities=14%  Similarity=0.123  Sum_probs=142.8

Q ss_pred             CCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCc---cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            8 EEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         8 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      +.|+++||||+  +-||++++++|.+.|+ +|++..|+...   ...+.++..... ++.++.+|++|++++.++++   
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLN-PSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccC-cceEeecCcCCHHHHHHHHHHHH
Confidence            35799999986  7999999999999999 98877654321   112222211112 56788999999998887664   


Q ss_pred             ----CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCcc
Q 020110           80 ----GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        80 ----~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                          .+|++||+||....        +...++....+++|+.++..+.+++...  .-.++|++||.....+.+.     
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~-----  157 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPN-----  157 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcc-----
Confidence                47999999996431        1123345778999999999988876432  2258999998644322111     


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccC
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (331)
                                     ...|+.+|...+.+.+.++.+   +|++++.+.||.+-.+..... .........+....     
T Consensus       158 ---------------~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~-~~~~~~~~~~~~~~-----  216 (258)
T PRK07370        158 ---------------YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAV-GGILDMIHHVEEKA-----  216 (258)
T ss_pred             ---------------cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcc-ccchhhhhhhhhcC-----
Confidence                           137999999999999988765   479999999999977642110 00011111111111     


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCC--CCCce
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESP--AASGR  250 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~--~~~g~  250 (331)
                       ....+...+|++.++..++...  ...|.
T Consensus       217 -p~~r~~~~~dva~~~~fl~s~~~~~~tG~  245 (258)
T PRK07370        217 -PLRRTVTQTEVGNTAAFLLSDLASGITGQ  245 (258)
T ss_pred             -CcCcCCCHHHHHHHHHHHhChhhccccCc
Confidence             1234667899999999988643  23453

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=2.5e-16  Score=134.04  Aligned_cols=214  Identities=14%  Similarity=0.083  Sum_probs=142.3

Q ss_pred             CCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .|.++||||++  -||.++++.|.++|+ +|++..|+........++....+ ...++++|++|++++.++++       
T Consensus         8 ~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g-~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (260)
T PRK06603          8 GKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIG-CNFVSELDVTNPKSISNLFDDIKEKWG   85 (260)
T ss_pred             CcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcC-CceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47899999997  799999999999999 99888776321222222221111 23457899999988887764       


Q ss_pred             CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 ~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                      .+|++||+|+....        +...+++...+++|+.++..+++++...  .-.++|++||.....+.+..        
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~--------  157 (260)
T PRK06603         86 SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNY--------  157 (260)
T ss_pred             CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcc--------
Confidence            47999999986431        1122345778999999999988876432  22589999986443222111        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                  ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+..... ..............+      ..
T Consensus       158 ------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~  218 (260)
T PRK06603        158 ------------NVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAI-GDFSTMLKSHAATAP------LK  218 (260)
T ss_pred             ------------cchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcC-CCcHHHHHHHHhcCC------cC
Confidence                        37999999999998888754   579999999999977642110 001111111211111      12


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      .+...+|+|+++.+++...  ...|..
T Consensus       219 r~~~pedva~~~~~L~s~~~~~itG~~  245 (260)
T PRK06603        219 RNTTQEDVGGAAVYLFSELSKGVTGEI  245 (260)
T ss_pred             CCCCHHHHHHHHHHHhCcccccCcceE
Confidence            3577899999999998753  235543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2e-16  Score=133.00  Aligned_cols=186  Identities=12%  Similarity=0.085  Sum_probs=126.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ++++++||||+|+||++++++|+++|+ +|++++|+......  .... .  ....+.+|+++.+++.+.+.++|++||+
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~--~~~~-~--~~~~~~~D~~~~~~~~~~~~~iDilVnn   86 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSE--SNDE-S--PNEWIKWECGKEESLDKQLASLDVLILN   86 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhh--hhcc-C--CCeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence            457999999999999999999999999 99999887622111  1111 1  2356789999999999888899999999


Q ss_pred             ccCCCC-CCCCCchhhhhHHHHHHHHHHHHHHHhC-------CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhc
Q 020110           88 ASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRF-------GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (331)
Q Consensus        88 a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (331)
                      ||.... ....+++...+++|+.++.++++++...       +-..++..||.....+ +.                   
T Consensus        87 AG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~-------------------  146 (245)
T PRK12367         87 HGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-AL-------------------  146 (245)
T ss_pred             CccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CC-------------------
Confidence            997443 2223456788999999999999987432       1123444444322111 00                   


Q ss_pred             cCcchhHHHHHHHHHHHHHHH-------HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHH
Q 020110          160 RKKWYPVSKTLAEKAAWEFAE-------KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (331)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~-------~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  232 (331)
                       ...|+.||...+.+. .+++       ..++.+..+.|+.+..+..                         ....+..+
T Consensus       147 -~~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~-------------------------~~~~~~~~  199 (245)
T PRK12367        147 -SPSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSELN-------------------------PIGIMSAD  199 (245)
T ss_pred             -CchhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCcccccC-------------------------ccCCCCHH
Confidence             126999999875433 2222       3578888888876533210                         01246789


Q ss_pred             HHHHHHHHhhcCCC
Q 020110          233 DVAKAQVLLFESPA  246 (331)
Q Consensus       233 D~a~a~~~~l~~~~  246 (331)
                      |+|+.++.++....
T Consensus       200 ~vA~~i~~~~~~~~  213 (245)
T PRK12367        200 FVAKQILDQANLGL  213 (245)
T ss_pred             HHHHHHHHHHhcCC
Confidence            99999999887553

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=1.5e-16  Score=135.46  Aligned_cols=213  Identities=14%  Similarity=0.093  Sum_probs=141.1

Q ss_pred             CCeEEEeCc--chHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .|++|||||  ++-||.+++++|+++|+ +|++..|.....+.+.++....+ ....+.+|++|++++.++++       
T Consensus         6 ~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          6 GKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             CcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            478999996  67999999999999999 99887654222222222211111 23468899999998887764       


Q ss_pred             CccEEEEcccCCCCC---------CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 ~~d~vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                      .+|++||+||.....         ...+++...+++|+.++..+.+++...  +-+++|++||..+..+.+.        
T Consensus        84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~--------  155 (260)
T PRK06997         84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPN--------  155 (260)
T ss_pred             CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCC--------
Confidence            479999999875321         112345667899999999998887543  2357999998644322111        


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                  ...|+.+|...+.+.+.++.+   +|++++.+.||.+-.+.... ..........+....      ..
T Consensus       156 ------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~~~~~~~~~~~~~------p~  216 (260)
T PRK06997        156 ------------YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG-IKDFGKILDFVESNA------PL  216 (260)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc-ccchhhHHHHHHhcC------cc
Confidence                        136999999999999888765   47999999999987753211 100011111111111      11


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCce
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGR  250 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~  250 (331)
                      ..+..++|+++++.+++...  ...|.
T Consensus       217 ~r~~~pedva~~~~~l~s~~~~~itG~  243 (260)
T PRK06997        217 RRNVTIEEVGNVAAFLLSDLASGVTGE  243 (260)
T ss_pred             cccCCHHHHHHHHHHHhCccccCccee
Confidence            23678899999999998753  24453

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.74  E-value=3.1e-16  Score=137.07  Aligned_cols=230  Identities=14%  Similarity=0.095  Sum_probs=143.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +++++||||++.||.+++++|++.| + +|+++.|+......+.......+..+.++.+|+++.+++.++++       +
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999 9 99999987654332221111112267888999999988876653       4


Q ss_pred             ccEEEEcccCCCCC-----CCCCchhhhhHHHHHHHHHHHHHHH----hCC--CCEEEEeCccceeccCCCC-CCcccc-
Q 020110           81 CKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAK----RFG--VRRVVVTSSISAIVPNPGW-KGKVFD-  147 (331)
Q Consensus        81 ~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~~~~v~~SS~~~~~~~~~~-~~~~~~-  147 (331)
                      +|++||+||.....     ...+.....+++|+.++..+.+++.    +.+  ..++|++||.......... ...+.+ 
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            89999999974321     1223346779999999888877653    222  3689999997553221100 000000 


Q ss_pred             -----------------CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH----cCCeEEEEcCCccc-CCCCCCCCCh
Q 020110          148 -----------------ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCL-GPLMQPYLNA  205 (331)
Q Consensus       148 -----------------E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~v~-G~~~~~~~~~  205 (331)
                                       +..+..+      ...|+.||.....+.+.++++    .++.++.++||.|. .+........
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~  235 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKG------AKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPL  235 (314)
T ss_pred             cccccccccCCCcccccCCCCcch------hhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHH
Confidence                             1111111      136999999988877777654    37999999999996 3332211111


Q ss_pred             hHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC--CCceEE
Q 020110          206 SCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (331)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~~  252 (331)
                      ...........       ....+..+++.|+.++.++....  ..|.|+
T Consensus       236 ~~~~~~~~~~~-------~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~  277 (314)
T TIGR01289       236 FRTLFPPFQKY-------ITKGYVSEEEAGERLAQVVSDPKLKKSGVYW  277 (314)
T ss_pred             HHHHHHHHHHH-------HhccccchhhhhhhhHHhhcCcccCCCceee
Confidence            10000000000       01124678999999888776543  345664

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=2.9e-16  Score=134.47  Aligned_cols=218  Identities=13%  Similarity=0.061  Sum_probs=145.1

Q ss_pred             CCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .|++|||||+  +-||.++++.|+++|+ +|++..|+......+.++....+ ....+++|++|+++++++++       
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            4789999997  8999999999999999 99887775322222332222112 35578999999998887764       


Q ss_pred             CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 ~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                      .+|++||+||....        +...++....+++|+.++..+++++...  +-.++|++||.....+.+.         
T Consensus        88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~---------  158 (272)
T PRK08159         88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPH---------  158 (272)
T ss_pred             CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCc---------
Confidence            47999999996531        1122345778999999999999887653  2358999998643221111         


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                            +     ..|+.+|...+.+.+.++.+   +++++.++.||.+..+..... ... ......... ..+    ..
T Consensus       159 ------~-----~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~-~~~~~~~~~-~~p----~~  220 (272)
T PRK08159        159 ------Y-----NVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-GDF-RYILKWNEY-NAP----LR  220 (272)
T ss_pred             ------c-----hhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-Ccc-hHHHHHHHh-CCc----cc
Confidence                  1     36999999999999888755   479999999999877532110 000 011111111 011    12


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      .+...+|+|+++++++...  ...|.. .+.+
T Consensus       221 r~~~peevA~~~~~L~s~~~~~itG~~i~vdg  252 (272)
T PRK08159        221 RTVTIEEVGDSALYLLSDLSRGVTGEVHHVDS  252 (272)
T ss_pred             ccCCHHHHHHHHHHHhCccccCccceEEEECC
Confidence            3578899999999998754  345644 4443

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.74  E-value=7.2e-17  Score=129.18  Aligned_cols=164  Identities=22%  Similarity=0.281  Sum_probs=122.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh----hcCCCCCCCcEEEEEccCCCchHHHHHhcC-----
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVEG-----   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----   80 (331)
                      ++++||||+|+||.+++++|+++|...|+.+.|+.......    ..+..... ++.++.+|+++++++.++++.     
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGA-EVTVVACDVADRAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999863688888865443221    11111112 678899999998887776543     


Q ss_pred             --ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           81 --CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        81 --~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                        +|+|||+++.....    ...++....++.|+.++.+++++++..+.+++|++||..+.++..+.             
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~-------------  146 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQ-------------  146 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCc-------------
Confidence              69999999865421    12234567799999999999999988888899999997665543321             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCccc
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCL  195 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~  195 (331)
                             ..|+.+|...+.+++... ..+++++.+.|+.+-
T Consensus       147 -------~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~  179 (180)
T smart00822      147 -------ANYAAANAFLDALAAHRR-ARGLPATSINWGAWA  179 (180)
T ss_pred             -------hhhHHHHHHHHHHHHHHH-hcCCceEEEeecccc
Confidence                   379999999999885544 678999999887654

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.73  E-value=3.8e-16  Score=138.93  Aligned_cols=188  Identities=18%  Similarity=0.081  Sum_probs=126.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ++|+|+||||+|+||++++++|.++|+ +|++++|+.........  .... ++..+.+|++|++++.+.+.++|++||+
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~--~~~~-~v~~v~~Dvsd~~~v~~~l~~IDiLInn  252 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEIN--GEDL-PVKTLHWQVGQEAALAELLEKVDILIIN  252 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh--hcCC-CeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence            467999999999999999999999999 99999887543221111  1111 5678899999999999999999999999


Q ss_pred             ccCCCC-CCCCCchhhhhHHHHHHHHHHHHHHHhC----CC---C-EEEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           88 ASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRF----GV---R-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        88 a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~---~-~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      ||.... +...++....+++|+.++.++++++...    +.   + .+|++|++ ...+ +.                  
T Consensus       253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa-~~~~-~~------------------  312 (406)
T PRK07424        253 HGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEA-EVNP-AF------------------  312 (406)
T ss_pred             CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccc-cccC-CC------------------
Confidence            986543 2223345778999999999999987432    21   2 24554432 2110 00                  


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHH
Q 020110          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQ  238 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~  238 (331)
                        ...|+.||...+.+........++.+..+.|+.+    ..+ ..                    ....+..+|+|+.+
T Consensus       313 --~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~----~t~-~~--------------------~~~~~spe~vA~~i  365 (406)
T PRK07424        313 --SPLYELSKRALGDLVTLRRLDAPCVVRKLILGPF----KSN-LN--------------------PIGVMSADWVAKQI  365 (406)
T ss_pred             --chHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCC----cCC-CC--------------------cCCCCCHHHHHHHH
Confidence              0269999999988653322234444444444332    111 00                    11247889999999


Q ss_pred             HHhhcCCC
Q 020110          239 VLLFESPA  246 (331)
Q Consensus       239 ~~~l~~~~  246 (331)
                      +.+++.+.
T Consensus       366 l~~i~~~~  373 (406)
T PRK07424        366 LKLAKRDF  373 (406)
T ss_pred             HHHHHCCC
Confidence            99997664

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=9.3e-16  Score=130.25  Aligned_cols=218  Identities=15%  Similarity=0.121  Sum_probs=142.7

Q ss_pred             cCCCeEEEeCc--chHHHHHHHHHHHHCCCCEEEEEecCCCc--cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            7 KEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         7 ~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      .+.|+++||||  ++.||.+++++|+++|+ +|++..|+...  ...+....  .. ++.++.+|++|++++.++++   
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~--~~-~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRL--PE-PAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhc--CC-CCcEEeCCCCCHHHHHHHHHHHH
Confidence            44579999999  89999999999999999 99998875421  12221111  11 56789999999988877653   


Q ss_pred             ----CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCcc
Q 020110           80 ----GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        80 ----~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                          ++|++||+||....        +...++....+++|+.++..+.+++...  .-.++|++|+... .+.       
T Consensus        81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~-~~~-------  152 (256)
T PRK07889         81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT-VAW-------  152 (256)
T ss_pred             HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc-ccC-------
Confidence                47999999997532        1112334567899999999888876543  2247888875421 111       


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccC
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (331)
                              |.+     ..|+.+|...+.+.+.++.+   +|++++.+.||.+-.+..... .........+....+.   
T Consensus       153 --------~~~-----~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p~---  215 (256)
T PRK07889        153 --------PAY-----DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI-PGFELLEEGWDERAPL---  215 (256)
T ss_pred             --------Ccc-----chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc-cCcHHHHHHHHhcCcc---
Confidence                    111     36899999999988887654   589999999999987643211 0001111111111110   


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~-~~~~  255 (331)
                        .+.+...+|+|++++.++....  ..|.+ .+.+
T Consensus       216 --~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdg  249 (256)
T PRK07889        216 --GWDVKDPTPVARAVVALLSDWFPATTGEIVHVDG  249 (256)
T ss_pred             --ccccCCHHHHHHHHHHHhCcccccccceEEEEcC
Confidence              1246789999999999887543  35544 4433

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.6e-16  Score=132.07  Aligned_cols=184  Identities=12%  Similarity=0.103  Sum_probs=134.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----CccEEEE
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCKGVFH   86 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vih   86 (331)
                      +++||||+|.||+++++.|.++|+ +|++..|+........+..     ++.++.+|+++++++.++++    .+|++||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            799999999999999999999999 9999988765433322211     45678899999998887765    5899999


Q ss_pred             cccCCCC---------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           87 VASPCTL---------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        87 ~a~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      +|+....         ....++....+++|+.++.++++++...  .-.++|++||..    .+..              
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~~--------------  137 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPAG--------------  137 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCCc--------------
Confidence            9974211         0012346788999999999999987543  235899999853    1110              


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHH
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  232 (331)
                            ..|+.+|...+.+.+.++.+   +|++++.+.||.+..+...           .. ..         .+.-.++
T Consensus       138 ------~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~-----------~~-~~---------~p~~~~~  190 (223)
T PRK05884        138 ------SAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYD-----------GL-SR---------TPPPVAA  190 (223)
T ss_pred             ------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhh-----------hc-cC---------CCCCCHH
Confidence                  27999999999999888754   5799999999988654210           00 00         0112679


Q ss_pred             HHHHHHHHhhcCC
Q 020110          233 DVAKAQVLLFESP  245 (331)
Q Consensus       233 D~a~a~~~~l~~~  245 (331)
                      |+++++.+++...
T Consensus       191 ~ia~~~~~l~s~~  203 (223)
T PRK05884        191 EIARLALFLTTPA  203 (223)
T ss_pred             HHHHHHHHHcCch
Confidence            9999999887643

>PRK06484 short chain dehydrogenase; Validated

Probab=99.72  E-value=3.5e-16  Score=146.51  Aligned_cols=207  Identities=17%  Similarity=0.129  Sum_probs=144.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +.|++|||||++.||.+++++|.++|+ +|+++.|+...........  .. ++.++.+|+++++++.++++       .
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSL--GP-DHHALAMDVSDEAQIREGFEQLHREFGR   79 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--CC-ceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            357999999999999999999999999 9999988765433332211  11 67789999999988877764       4


Q ss_pred             ccEEEEcccCCCC------CCCCCchhhhhHHHHHHHHHHHHHHHhC----CCC-EEEEeCccceeccCCCCCCccccCC
Q 020110           81 CKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF----GVR-RVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        81 ~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~-~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                      +|++||+||....      +...+++...+++|+.++..+++++...    +.. ++|++||.....+.++.        
T Consensus        80 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~--------  151 (520)
T PRK06484         80 IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKR--------  151 (520)
T ss_pred             CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCC--------
Confidence            7999999986321      2233445788999999999998877543    333 89999997654433221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                  ..|+.+|...+.+.+.++.+   .+++++.+.|+.+..+...................  .    ...
T Consensus       152 ------------~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~----~~~  213 (520)
T PRK06484        152 ------------TAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSR--I----PLG  213 (520)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhc--C----CCC
Confidence                        37999999999998887755   47999999999887765321100000000001110  0    112


Q ss_pred             CceeHHHHHHHHHHhhcC
Q 020110          227 GAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~  244 (331)
                      .+...+|+++++.+++..
T Consensus       214 ~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        214 RLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             CCcCHHHHHHHHHHHhCc
Confidence            356789999999888764

>PRK05855 short chain dehydrogenase; Validated

Probab=99.72  E-value=8.9e-17  Score=152.68  Aligned_cols=215  Identities=19%  Similarity=0.102  Sum_probs=144.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ..+++|||||+|+||++++++|.++|+ +|+++.|+......+.......+.++.++.+|++|++++.++++       .
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            346899999999999999999999999 99999997654333222111111268899999999998887765       3


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCC-CCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFG-VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|++||+||......    ..++....+++|+.++.++.+++.    +.+ -.++|++||..++.+.++.          
T Consensus       393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----------  462 (582)
T PRK05855        393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSL----------  462 (582)
T ss_pred             CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCC----------
Confidence            799999999754321    223456778899999999888753    223 2589999997554332221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC--hhHHHHHHHHcCCCCccCcCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                ..|+.+|...+.+.+.++.+   +|++++++.||.+-.+.......  ......... .......  ...
T Consensus       463 ----------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~  529 (582)
T PRK05855        463 ----------PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARR-RGRADKL--YQR  529 (582)
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhH-Hhhhhhh--ccc
Confidence                      37999999999888877644   48999999999997764322100  000000000 0000000  001


Q ss_pred             CceeHHHHHHHHHHhhcCCC
Q 020110          227 GAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~~  246 (331)
                      ..+..+|+|++++.++..+.
T Consensus       530 ~~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        530 RGYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             cCCCHHHHHHHHHHHHHcCC
Confidence            12467999999999998654

>PRK05599 hypothetical protein; Provisional

Probab=99.72  E-value=1.6e-15  Score=128.07  Aligned_cols=203  Identities=15%  Similarity=0.088  Sum_probs=137.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      |+++||||++.||.+++++|. +|+ +|+++.|+......+.+ +.......+.++.+|++|+++++++++       ++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999998 598 99999987654433221 111111147889999999988876653       47


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCC-CCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      |++||+||......    ........+++|+.+...+++++    ++.+ -.++|++||..+..+.++.           
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~-----------  147 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRAN-----------  147 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCC-----------
Confidence            99999999754311    11112345677877777655443    3332 3689999997543322211           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   .+++++.+.||.+.++.....              .+.     . -..
T Consensus       148 ---------~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~--------------~~~-----~-~~~  198 (246)
T PRK05599        148 ---------YVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM--------------KPA-----P-MSV  198 (246)
T ss_pred             ---------cchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC--------------CCC-----C-CCC
Confidence                     37999999999888887755   479999999999877642110              000     0 024


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEe
Q 020110          230 PVKDVAKAQVLLFESPAASGRYLCT  254 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~~~g~~~~~  254 (331)
                      ..+|+|++++.++.+......+...
T Consensus       199 ~pe~~a~~~~~~~~~~~~~~~~~~~  223 (246)
T PRK05599        199 YPRDVAAAVVSAITSSKRSTTLWIP  223 (246)
T ss_pred             CHHHHHHHHHHHHhcCCCCceEEeC
Confidence            6899999999999876543444333

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.72  E-value=1.1e-16  Score=133.41  Aligned_cols=219  Identities=19%  Similarity=0.143  Sum_probs=145.0

Q ss_pred             cccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh-hcCCCCCCC-cEEEEEccCCCchHHHHHh----
Q 020110            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDA-NLRVFEADVLDSGAVSRAV----   78 (331)
Q Consensus         5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~----   78 (331)
                      .....|.|+||||+..||.+++.+|.+.|. .++.+.|.......+ .++.+.... ++.++++|++|.+++.+++    
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            344568999999999999999999999998 777777776665555 333222221 4899999999999988665    


Q ss_pred             ---cCccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCcccc
Q 020110           79 ---EGCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        79 ---~~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                         .++|++||+||+.....    ..++....+++|+.|+..+.+++-    +.+-.++|.+||..+..+.+..      
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~------  160 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR------  160 (282)
T ss_pred             HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc------
Confidence               36899999999876421    122236689999999988888773    3345789999998665544332      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEE----EEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV----AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~----~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                    ..|..||.+.+.+...+..+..-..+    ++-||.|=........           .+..-.  .
T Consensus       161 --------------~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~~~-----------~~~~~~--~  213 (282)
T KOG1205|consen  161 --------------SIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGKEL-----------LGEEGK--S  213 (282)
T ss_pred             --------------cccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccchhh-----------cccccc--c
Confidence                          27999999999999888767633222    3566666444221110           000000  1


Q ss_pred             CCCCceeHHHHHH--HHHHhhcCCCCCc--eEEEeccc
Q 020110          224 HWLGAVPVKDVAK--AQVLLFESPAASG--RYLCTNGI  257 (331)
Q Consensus       224 ~~~~~v~v~D~a~--a~~~~l~~~~~~g--~~~~~~~~  257 (331)
                      ........+|++.  ++..++..+...+  .+...+..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~  251 (282)
T KOG1205|consen  214 QQGPFLRTEDVADPEAVAYAISTPPCRQVEDIIIAPSW  251 (282)
T ss_pred             cccchhhhhhhhhHHHHHHHHhcCcccchhheeecccc
Confidence            2233445556644  7777777665544  35554433

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=6.7e-16  Score=141.83  Aligned_cols=216  Identities=20%  Similarity=0.147  Sum_probs=143.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +.+++|||||+|.||..++++|.++|+ +|++++|..... .+.+.....  +..++.+|+++.+++.++++       .
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~-~l~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  284 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGE-ALAAVANRV--GGTALALDITAPDAPARIAEHLAERHGG  284 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHH-HHHHHHHHc--CCeEEEEeCCCHHHHHHHHHHHHHhCCC
Confidence            357999999999999999999999999 999988743221 111111100  34678899999988877664       4


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhCC----CCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+|+.....    ...+.....+++|+.++.++.+++....    -.+||++||...+.+.++.           
T Consensus       285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~-----------  353 (450)
T PRK08261        285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQ-----------  353 (450)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCC-----------
Confidence            79999999975432    1233456788999999999999987642    2689999997665544332           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   .++++..+.|+.+-.+.... ...   ........  .   +.....-
T Consensus       354 ---------~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~-~~~---~~~~~~~~--~---~~l~~~~  415 (450)
T PRK08261        354 ---------TNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA-IPF---ATREAGRR--M---NSLQQGG  415 (450)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc-cch---hHHHHHhh--c---CCcCCCC
Confidence                     37999999888877776543   58999999999876543211 111   01111110  0   0112233


Q ss_pred             eHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 020110          230 PVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~--~~g~-~~~~~~  256 (331)
                      -.+|+++++.+++....  ..|. +.+.++
T Consensus       416 ~p~dva~~~~~l~s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        416 LPVDVAETIAWLASPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             CHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence            46799999998886432  3453 344443

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.71  E-value=1.5e-15  Score=127.41  Aligned_cols=199  Identities=18%  Similarity=0.140  Sum_probs=135.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh---cCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV---EGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~d~v   84 (331)
                      |+|+||||+|+||++++++|+++|  + .|....|+....  ..     .. ++.++++|++++++++++.   .++|+|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~-~v~~~~~~~~~~--~~-----~~-~~~~~~~Dls~~~~~~~~~~~~~~id~l   71 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDA-TVHATYRHHKPD--FQ-----HD-NVQWHALDVTDEAEIKQLSEQFTQLDWL   71 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCC-EEEEEccCCccc--cc-----cC-ceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            489999999999999999999985  5 666665544321  10     11 7889999999998876654   468999


Q ss_pred             EEcccCCCCCC----------CCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           85 FHVASPCTLED----------PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        85 ih~a~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      ||+||......          ..+.....+++|+.++..+.+++...    +..+++++||.......          ..
T Consensus        72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~----------~~  141 (235)
T PRK09009         72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISD----------NR  141 (235)
T ss_pred             EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccccc----------CC
Confidence            99999764211          11223467899999998888876543    34678898874221100          00


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH-----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                        .+.     ...|+.+|...+.+.+.++.+     .++++..+.||.+.++.....           ....      ..
T Consensus       142 --~~~-----~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-----------~~~~------~~  197 (235)
T PRK09009        142 --LGG-----WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-----------QQNV------PK  197 (235)
T ss_pred             --CCC-----cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-----------hhcc------cc
Confidence              010     137999999999999888754     378999999999887753210           0010      12


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCceE
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASGRY  251 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g~~  251 (331)
                      ..++..+|+|++++.++....  ..|.+
T Consensus       198 ~~~~~~~~~a~~~~~l~~~~~~~~~g~~  225 (235)
T PRK09009        198 GKLFTPEYVAQCLLGIIANATPAQSGSF  225 (235)
T ss_pred             CCCCCHHHHHHHHHHHHHcCChhhCCcE
Confidence            336789999999999997753  35544

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.69  E-value=4.6e-16  Score=135.98  Aligned_cols=197  Identities=16%  Similarity=0.101  Sum_probs=135.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCC-CCCcEEEEEccCCC--chHHH---HHhcC-
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLD--SGAVS---RAVEG-   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~--~~~~~---~~~~~-   80 (331)
                      ++.++||||||.||++++++|.++|+ +|++++|++.......+ +... .+.++..+.+|+++  .+.+.   +.+.+ 
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            57899999999999999999999999 99999998755433221 1110 11167788899985  23333   33343 


Q ss_pred             -ccEEEEcccCCCC------CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           81 -CKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        81 -~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                       +|++||+||....      +...++....+++|+.++..+.+++.    +.+.+++|++||..+......         
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~---------  202 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSD---------  202 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC---------
Confidence             5699999997532      11222346689999999999888764    345678999999755321100         


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                          |.     ...|+.||...+.+.+.++.+   .|++++++.||.+-.+.....             .       ...
T Consensus       203 ----p~-----~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~-------------~-------~~~  253 (320)
T PLN02780        203 ----PL-----YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR-------------R-------SSF  253 (320)
T ss_pred             ----cc-----chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc-------------C-------CCC
Confidence                10     137999999999999888755   489999999999977642210             0       011


Q ss_pred             CceeHHHHHHHHHHhhcC
Q 020110          227 GAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~  244 (331)
                      -....+++|+.++..+..
T Consensus       254 ~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        254 LVPSSDGYARAALRWVGY  271 (320)
T ss_pred             CCCCHHHHHHHHHHHhCC
Confidence            135789999999988853

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.1e-15  Score=132.78  Aligned_cols=220  Identities=17%  Similarity=0.089  Sum_probs=138.5

Q ss_pred             cccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc----------cchhhcCCCCCCCcEEEEEccCCCch
Q 020110            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD----------SSHLFALPGAGDANLRVFEADVLDSG   72 (331)
Q Consensus         3 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~~~~Dl~~~~   72 (331)
                      .|...+.|++|||||++.||.+++++|++.|+ +|+++.|+...          .....+.....+.++.++.+|+++++
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~   80 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPE   80 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            34444568999999999999999999999999 99999987421          11111111111115778999999998


Q ss_pred             HHHHHhc-------CccEEEEcc-cCCC-----C---CCCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCcc
Q 020110           73 AVSRAVE-------GCKGVFHVA-SPCT-----L---EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSI  132 (331)
Q Consensus        73 ~~~~~~~-------~~d~vih~a-~~~~-----~---~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~  132 (331)
                      ++.++++       .+|++||+| +...     .   +...++....+++|+.+...+++++..    .+-.++|++||.
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~  160 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDG  160 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCc
Confidence            8887764       479999999 6321     1   111233456788999988888776643    233589999985


Q ss_pred             ceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHH
Q 020110          133 SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAV  209 (331)
Q Consensus       133 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~  209 (331)
                      ...+.....            +     ....|+.+|.....+.+.++.+   .|+++..+.||.+-.+............
T Consensus       161 ~~~~~~~~~------------~-----~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~  223 (305)
T PRK08303        161 TAEYNATHY------------R-----LSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEEN  223 (305)
T ss_pred             cccccCcCC------------C-----CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccc
Confidence            332211100            0     0126999999999998877754   4799999999988665311000000000


Q ss_pred             HHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          210 LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      +......    .+. ..-+...+|+|.+++.++...
T Consensus       224 ~~~~~~~----~p~-~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        224 WRDALAK----EPH-FAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             hhhhhcc----ccc-cccCCCHHHHHHHHHHHHcCc
Confidence            0000000    010 122346899999999988755

>PLN00015 protochlorophyllide reductase

Probab=99.67  E-value=6.5e-15  Score=128.44  Aligned_cols=226  Identities=16%  Similarity=0.109  Sum_probs=138.4

Q ss_pred             EEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------CccEE
Q 020110           13 CVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCKGV   84 (331)
Q Consensus        13 lVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   84 (331)
                      |||||++.||.+++++|+++| + +|++..|+..............+.++.++.+|+++.+++.++++       .+|++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKW-HVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            599999999999999999999 8 99999887644332221111111268888999999998877663       47999


Q ss_pred             EEcccCCCCC-----CCCCchhhhhHHHHHHHHHHHHHHH----hCC--CCEEEEeCccceeccCC-CC-CC--------
Q 020110           85 FHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAK----RFG--VRRVVVTSSISAIVPNP-GW-KG--------  143 (331)
Q Consensus        85 ih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~~~~v~~SS~~~~~~~~-~~-~~--------  143 (331)
                      ||+||.....     ...+.....+++|+.++..+++++.    +.+  .+++|++||..+..... +. +.        
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            9999974321     1223456789999999888876653    333  46899999975432100 00 00        


Q ss_pred             ------------ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH----cCCeEEEEcCCcccCCCCCCCCChhH
Q 020110          144 ------------KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYLNASC  207 (331)
Q Consensus       144 ------------~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~  207 (331)
                                  .++++. ...+      ...|+.||...+.+.+.++++    .|+.+++++||.|.............
T Consensus       160 ~~~~~~~~~~~~~~~~~~-~~~~------~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~  232 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGG-EFDG------AKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLF  232 (308)
T ss_pred             hhhcccCCccchhhcccc-CCcH------HHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHH
Confidence                        000000 0011      136999999977766766654    47999999999996432211111111


Q ss_pred             HHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC--CCceEE
Q 020110          208 AVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (331)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~~  252 (331)
                      ..........    .  ...+..+++.|+.++.++....  ..|.|+
T Consensus       233 ~~~~~~~~~~----~--~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~  273 (308)
T PLN00015        233 RLLFPPFQKY----I--TKGYVSEEEAGKRLAQVVSDPSLTKSGVYW  273 (308)
T ss_pred             HHHHHHHHHH----H--hcccccHHHhhhhhhhhccccccCCCcccc
Confidence            1000000000    0  1124678999999888776532  345553

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.67  E-value=7.5e-16  Score=130.92  Aligned_cols=206  Identities=17%  Similarity=0.106  Sum_probs=137.1

Q ss_pred             eEEEeCcchHHHHHHHHHHHH----CCCCEEEEEecCCCccchhhc-CCC-CCCCcEEEEEccCCCchHHHHHhcC----
Q 020110           11 TVCVTGANGFIGTWLVKTLLD----NNYTSINATVFPGSDSSHLFA-LPG-AGDANLRVFEADVLDSGAVSRAVEG----   80 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~----~g~~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~----   80 (331)
                      .++||||+|.||.+++++|.+    .|+ +|+++.|+......+.. +.. ..+.++.++.+|++++++++++++.    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGS-VLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCc-EEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            589999999999999999997    799 99999997654333221 111 0112688899999999988776642    


Q ss_pred             -------ccEEEEcccCCCCC-C------CCCchhhhhHHHHHHHHHHHHHHHhC-----C-CCEEEEeCccceeccCCC
Q 020110           81 -------CKGVFHVASPCTLE-D------PVDPEKELILPAVQGTLNVLEAAKRF-----G-VRRVVVTSSISAIVPNPG  140 (331)
Q Consensus        81 -------~d~vih~a~~~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~~-----~-~~~~v~~SS~~~~~~~~~  140 (331)
                             .|++||+||..... .      ..+.....+++|+.++..+.+++...     + ..++|++||.....+.++
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence                   25899999864321 0      11234678999999988887766432     2 257999999755433222


Q ss_pred             CCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC--hhHHHHHHHHc
Q 020110          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQ  215 (331)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~--~~~~~~~~~~~  215 (331)
                      .                    ..|+.+|...+.+.+.++.+   .+++++.+.||.+-.+.......  ........+..
T Consensus       161 ~--------------------~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  220 (256)
T TIGR01500       161 W--------------------ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQE  220 (256)
T ss_pred             c--------------------hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHH
Confidence            1                    26999999999999888755   47999999999987653210000  00000000000


Q ss_pred             CCCCccCcCCCCceeHHHHHHHHHHhhc
Q 020110          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFE  243 (331)
Q Consensus       216 ~~~~~~~~~~~~~v~v~D~a~a~~~~l~  243 (331)
                      ..      ....+..++|+|.+++.++.
T Consensus       221 ~~------~~~~~~~p~eva~~~~~l~~  242 (256)
T TIGR01500       221 LK------AKGKLVDPKVSAQKLLSLLE  242 (256)
T ss_pred             HH------hcCCCCCHHHHHHHHHHHHh
Confidence            00      11236788999999999885

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.65  E-value=4.2e-15  Score=117.21  Aligned_cols=216  Identities=18%  Similarity=0.110  Sum_probs=155.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcccC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASP   90 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~~   90 (331)
                      +.++.|+.||.|+++++.....++ .|..+.|+.. .+.++.+..    .+.+.++|.....-+...+.++..++-+++.
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~-svgilsen~~-k~~l~sw~~----~vswh~gnsfssn~~k~~l~g~t~v~e~~gg  127 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVH-SVGILSENEN-KQTLSSWPT----YVSWHRGNSFSSNPNKLKLSGPTFVYEMMGG  127 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhce-eeeEeecccC-cchhhCCCc----ccchhhccccccCcchhhhcCCcccHHHhcC
Confidence            689999999999999999999999 9999988755 233333333    6778888887665555667788889888876


Q ss_pred             CCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHH
Q 020110           91 CTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTL  170 (331)
Q Consensus        91 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~  170 (331)
                      ...      ...+..+|-....+-.+++.+.|+++|+|+|-.  -++-+..           .|       ..|-.+|+.
T Consensus       128 fgn------~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~--d~~~~~~-----------i~-------rGY~~gKR~  181 (283)
T KOG4288|consen  128 FGN------IILMDRINGTANINAVKAAAKAGVPRFVYISAH--DFGLPPL-----------IP-------RGYIEGKRE  181 (283)
T ss_pred             ccc------hHHHHHhccHhhHHHHHHHHHcCCceEEEEEhh--hcCCCCc-----------cc-------hhhhccchH
Confidence            442      466778888888888999999999999999943  2222221           01       269999999


Q ss_pred             HHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCCh----hHHHHHHHHcCCC-----Cc-cCcCCCCceeHHHHHHHHHH
Q 020110          171 AEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNA----SCAVLQQLLQGSK-----DT-QEYHWLGAVPVKDVAKAQVL  240 (331)
Q Consensus       171 ~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~----~~~~~~~~~~~~~-----~~-~~~~~~~~v~v~D~a~a~~~  240 (331)
                      +|.-+..   .+..+.++||||++||...-.+...    ....+.....+-.     ++ .+......+.++++|.+.+.
T Consensus       182 AE~Ell~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~  258 (283)
T KOG4288|consen  182 AEAELLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALK  258 (283)
T ss_pred             HHHHHHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHH
Confidence            9977654   5668999999999999854322211    1122333333322     22 45677889999999999999


Q ss_pred             hhcCCCCCceEEEeccccCHHHHHHHHH
Q 020110          241 LFESPAASGRYLCTNGIYQFGDFAERVS  268 (331)
Q Consensus       241 ~l~~~~~~g~~~~~~~~~s~~e~~~~i~  268 (331)
                      +++++...|       .+++.|+.+...
T Consensus       259 ai~dp~f~G-------vv~i~eI~~~a~  279 (283)
T KOG4288|consen  259 AIEDPDFKG-------VVTIEEIKKAAH  279 (283)
T ss_pred             hccCCCcCc-------eeeHHHHHHHHH
Confidence            999887655       345566655543

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.65  E-value=1.2e-14  Score=111.70  Aligned_cols=208  Identities=19%  Similarity=0.171  Sum_probs=152.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      .|..+||||+..||+++++.|.+.|+ +|.+.+++...........+..+ +...+.+|+++.+++...++       .+
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Ga-rv~v~dl~~~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGA-RVAVADLDSAAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCc-EEEEeecchhhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            36789999999999999999999999 99998887765544444333323 67788999999988777554       37


Q ss_pred             cEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHhC----CC--CEEEEeCccceeccCCCCCCccccCCCC
Q 020110           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF----GV--RRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        82 d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~--~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++++||||+.-.    ....+++++.+.+|..|+....+++.+.    +.  -.+|.+||+-..-++.+.          
T Consensus        92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQ----------  161 (256)
T KOG1200|consen   92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQ----------  161 (256)
T ss_pred             cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccc----------
Confidence            999999998654    3456778999999999998888876443    22  279999997554444443          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                        ..|.+++...-|.+|..+.+..     +.++++..+-||++-.|....   ..+..+.++...-|.      ..+=..
T Consensus       162 --tnYAAsK~GvIgftktaArEla-----~knIrvN~VlPGFI~tpMT~~---mp~~v~~ki~~~iPm------gr~G~~  225 (256)
T KOG1200|consen  162 --TNYAASKGGVIGFTKTAARELA-----RKNIRVNVVLPGFIATPMTEA---MPPKVLDKILGMIPM------GRLGEA  225 (256)
T ss_pred             --hhhhhhcCceeeeeHHHHHHHh-----hcCceEeEeccccccChhhhh---cCHHHHHHHHccCCc------cccCCH
Confidence              2345555566788888887766     578999999999999987543   223455565555433      334567


Q ss_pred             HHHHHHHHHhhcC
Q 020110          232 KDVAKAQVLLFES  244 (331)
Q Consensus       232 ~D~a~a~~~~l~~  244 (331)
                      +|+|..++.+...
T Consensus       226 EevA~~V~fLAS~  238 (256)
T KOG1200|consen  226 EEVANLVLFLASD  238 (256)
T ss_pred             HHHHHHHHHHhcc
Confidence            9999999887743

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.64  E-value=1.5e-15  Score=120.50  Aligned_cols=151  Identities=21%  Similarity=0.229  Sum_probs=114.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC--CCccchh-hcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP--GSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~--~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      |+++||||+|-||..++++|+++|...|+++.|+  ......+ .++.... .++.++++|++++++++++++       
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence            5899999999999999999999964388888887  2222222 1111112 289999999999988887774       


Q ss_pred             CccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           80 GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      .+|++||+|+.......    .+.....+++|+.+...+.+++...+-.++|++||.....+.+..              
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------------  145 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGM--------------  145 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTB--------------
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCC--------------
Confidence            47999999998764221    233468899999999999998877656789999998665544432              


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHH
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEK  181 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~  181 (331)
                            ..|+.+|...+.+.+.++++
T Consensus       146 ------~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  146 ------SAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ------hhHHHHHHHHHHHHHHHHHh
Confidence                  27999999999999988765

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.64  E-value=1.1e-15  Score=120.09  Aligned_cols=272  Identities=18%  Similarity=0.147  Sum_probs=168.3

Q ss_pred             CeEEEeCcchHHHHHHHH-----HHHHCC----CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC
Q 020110           10 ETVCVTGANGFIGTWLVK-----TLLDNN----YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~-----~L~~~g----~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (331)
                      .+.+.-+++|+|+..|..     ++-+.+    | .|++++|.+.+...            .+-+.|..-..      -.
T Consensus        13 r~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h-~vtv~sR~pg~~ri------------tw~el~~~Gip------~s   73 (315)
T KOG3019|consen   13 RDAVSNWSNGIIRENLGSETSCCHDTNVHSADNH-AVTVLSRSPGKARI------------TWPELDFPGIP------IS   73 (315)
T ss_pred             ccCCCCccccchhccccCcccccccCCCCccccc-ceEEEecCCCCccc------------ccchhcCCCCc------ee
Confidence            467888999999988877     333333    7 99999998876432            22222222110      02


Q ss_pred             ccEEEEcccCCCCC---CCC-CchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           81 CKGVFHVASPCTLE---DPV-DPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        81 ~d~vih~a~~~~~~---~~~-~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +++++++++.....   .+. .-..+.+-..+..+..|+++...+  -.+.+|.+|.. ++|.....  ..++|++....
T Consensus        74 c~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gv-a~y~pS~s--~eY~e~~~~qg  150 (315)
T KOG3019|consen   74 CVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGV-AVYVPSES--QEYSEKIVHQG  150 (315)
T ss_pred             hHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEee-EEeccccc--cccccccccCC
Confidence            34444444322211   111 111333333456677888888766  34568988876 55543332  45666654321


Q ss_pred             hhhhccCcchhHHHHHHH--HHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHH
Q 020110          155 EYCKSRKKWYPVSKTLAE--KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e--~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  232 (331)
                      -        --.+.+..|  ......  ....+.+++|.|.|.|.+-..  .......-++..|.++..|++.++|||++
T Consensus       151 f--------d~~srL~l~WE~aA~~~--~~~~r~~~iR~GvVlG~gGGa--~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~  218 (315)
T KOG3019|consen  151 F--------DILSRLCLEWEGAALKA--NKDVRVALIRIGVVLGKGGGA--LAMMILPFQMGAGGPLGSGQQWFPWIHVD  218 (315)
T ss_pred             h--------HHHHHHHHHHHHHhhcc--CcceeEEEEEEeEEEecCCcc--hhhhhhhhhhccCCcCCCCCeeeeeeehH
Confidence            1        122332222  222211  224899999999999987432  11222334677888898999999999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC---CCCCCCCCC-----CC--CCccccccchHHHHhhC
Q 020110          233 DVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE---FPVHRFDGE-----TQ--PGLIPCKDAAKRLMDLG  301 (331)
Q Consensus       233 D~a~a~~~~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~---~~~~~~~~~-----~~--~~~~~~~~~~~k~~~lG  301 (331)
                      |++..+..+++++...|+.|+ ++.+.+..|+.+.+...++.   .++|.+...     +.  ........-..|+.++|
T Consensus       219 DL~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~G  298 (315)
T KOG3019|consen  219 DLVNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALELG  298 (315)
T ss_pred             HHHHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhcC
Confidence            999999999999989997765 67789999999999999832   133322211     11  12233445556777899


Q ss_pred             CCc-c-CHHHHHHHHH
Q 020110          302 LVF-T-PVEDAVRETV  315 (331)
Q Consensus       302 ~~~-~-~~~~~l~~~~  315 (331)
                      |++ . .+.+++++++
T Consensus       299 f~f~yp~vk~Al~~i~  314 (315)
T KOG3019|consen  299 FEFKYPYVKDALRAIM  314 (315)
T ss_pred             ceeechHHHHHHHHHh
Confidence            988 3 8899998865

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.63  E-value=4.2e-14  Score=117.08  Aligned_cols=202  Identities=13%  Similarity=0.063  Sum_probs=144.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+++.||||||++.+|+.++.+|.+.|. .+.+.+.+........+.....+ ++..+.+|+++.+++.+..+       
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4567999999999999999999999999 88888887655444333222113 68899999999988876654       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|++||+||......    ..+..+..+++|+.+.....++.    .+.+-.++|.++|..+..+-++.          
T Consensus       114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl----------  183 (300)
T KOG1201|consen  114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGL----------  183 (300)
T ss_pred             CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccc----------
Confidence            4799999999877532    23334778999999887766655    44456789999998776665553          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH------cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK------HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~------~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                ..|..||..+.-+.+.+..+      .|++.+.+-|+.+-.....               + ..+++ ..
T Consensus       184 ----------~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~---------------~-~~~~~-~l  236 (300)
T KOG1201|consen  184 ----------ADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFD---------------G-ATPFP-TL  236 (300)
T ss_pred             ----------hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccC---------------C-CCCCc-cc
Confidence                      26888888877666555422      3688888888766432211               1 00111 35


Q ss_pred             CCceeHHHHHHHHHHhhcCCCC
Q 020110          226 LGAVPVKDVAKAQVLLFESPAA  247 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~~  247 (331)
                      .+.+..+.+|+.++.++.....
T Consensus       237 ~P~L~p~~va~~Iv~ai~~n~~  258 (300)
T KOG1201|consen  237 APLLEPEYVAKRIVEAILTNQA  258 (300)
T ss_pred             cCCCCHHHHHHHHHHHHHcCCc
Confidence            6778899999999988876543

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.61  E-value=3e-14  Score=118.54  Aligned_cols=166  Identities=10%  Similarity=0.047  Sum_probs=117.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHh-------c
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAV-------E   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~   79 (331)
                      +.|+++||||++-||..++++|.+.|+ +|++..|+........+ ...... ++..+.+|+.+++++++++       .
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTD-NVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCC-CeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            357999999999999999999999999 99999987654433221 111122 6778889999998887665       2


Q ss_pred             -CccEEEEcccCCCCC-CC----CCchhhhhHHHHHHHHHHHHHH----HhCC-CCEEEEeCccceeccCCCCCCccccC
Q 020110           80 -GCKGVFHVASPCTLE-DP----VDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 -~~d~vih~a~~~~~~-~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                       .+|++||+||..... ..    .+.....+++|+.++..+++++    ++.+ -..+|++||...   .+..       
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~---~~~~-------  151 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD---HQDL-------  151 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC---CCCc-------
Confidence             589999999753321 11    1223445677877776665544    3322 358999998522   1111       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPL  198 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~  198 (331)
                                   ..|+.+|...+.+.+.++.+   +++++..+.||.+-.+.
T Consensus       152 -------------~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        152 -------------TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence                         26999999999888877654   58999999999887773

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.58  E-value=5e-13  Score=115.25  Aligned_cols=211  Identities=12%  Similarity=0.039  Sum_probs=135.5

Q ss_pred             cCCCeEEEeCc--chHHHHHHHHHHHHCCCCEEEEEecCCCccchhh------------cCCCC-CCCcEEEEEccC--C
Q 020110            7 KEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF------------ALPGA-GDANLRVFEADV--L   69 (331)
Q Consensus         7 ~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~------------~~~~~-~~~~~~~~~~Dl--~   69 (331)
                      .++|++|||||  +..||.++++.|.+.|. +|++ .|+........            ..... .......+.+|+  .
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            45789999999  79999999999999999 9887 44322211111            01100 000245677888  3


Q ss_pred             Cch------------------HHHHHhc-------CccEEEEcccCCC----C--CCCCCchhhhhHHHHHHHHHHHHHH
Q 020110           70 DSG------------------AVSRAVE-------GCKGVFHVASPCT----L--EDPVDPEKELILPAVQGTLNVLEAA  118 (331)
Q Consensus        70 ~~~------------------~~~~~~~-------~~d~vih~a~~~~----~--~~~~~~~~~~~~~n~~~~~~l~~~~  118 (331)
                      +++                  ++.++++       .+|++|||||...    .  +...+++...+++|+.++..+.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~  164 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF  164 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            333                  5555543       4799999997432    1  2233456888999999999998876


Q ss_pred             HhC--CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH----cCCeEEEEcCC
Q 020110          119 KRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPA  192 (331)
Q Consensus       119 ~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~  192 (331)
                      ...  .-.++|++||..+..+.+..                   ...|+.+|...+.+.+.++.+    +|+++..+-||
T Consensus       165 ~p~m~~~G~II~isS~a~~~~~p~~-------------------~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG  225 (303)
T PLN02730        165 GPIMNPGGASISLTYIASERIIPGY-------------------GGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAG  225 (303)
T ss_pred             HHHHhcCCEEEEEechhhcCCCCCC-------------------chhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeC
Confidence            543  12689999987543322211                   026999999999999888764    37999999999


Q ss_pred             cccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          193 TCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       193 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      .+-.+.... ...............+      ...+...+|++.++++++...
T Consensus       226 ~v~T~~~~~-~~~~~~~~~~~~~~~p------l~r~~~peevA~~~~fLaS~~  271 (303)
T PLN02730        226 PLGSRAAKA-IGFIDDMIEYSYANAP------LQKELTADEVGNAAAFLASPL  271 (303)
T ss_pred             CccCchhhc-ccccHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCcc
Confidence            998775322 1111111111111111      123467899999999988643

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.57  E-value=2.4e-13  Score=115.12  Aligned_cols=216  Identities=19%  Similarity=0.151  Sum_probs=144.4

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC-C--CCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-P--GAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~--~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      ..++|.+|||||+.-||++++++|.+.|. +|+...|+.......... .  ...+.++..+.+|+++.++++++++   
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999 999999987653332211 1  1112268899999998877665542   


Q ss_pred             -----CccEEEEcccCCCC-----CCCCCchhhhhHHHHHH-HHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCc
Q 020110           80 -----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQG-TLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGK  144 (331)
Q Consensus        80 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~-~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~  144 (331)
                           ++|++||+||....     +...+.++..+++|+.| ...+.+++..+    +-..++++||..........   
T Consensus        84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~---  160 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS---  160 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC---
Confidence                 48999999997664     23345568889999995 55555555433    44568888876443322211   


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCCh--hHHHHHHHHcCCCC
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNA--SCAVLQQLLQGSKD  219 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~  219 (331)
                                     + ..|+.+|...+.+.+..+.   .+|+++.++-||.+..+........  ...+..........
T Consensus       161 ---------------~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  224 (270)
T KOG0725|consen  161 ---------------G-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAV  224 (270)
T ss_pred             ---------------c-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccccc
Confidence                           0 2799999999999988764   4589999999999998862111110  01111110011111


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                          ..-.+.-.+|++.++..+....
T Consensus       225 ----p~gr~g~~~eva~~~~fla~~~  246 (270)
T KOG0725|consen  225 ----PLGRVGTPEEVAEAAAFLASDD  246 (270)
T ss_pred             ----ccCCccCHHHHHHhHHhhcCcc
Confidence                1234567799999998877664

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.57  E-value=4.1e-14  Score=113.36  Aligned_cols=160  Identities=24%  Similarity=0.311  Sum_probs=114.2

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC-cc---chhhcCCCCCCCcEEEEEccCCCchHHHHHhcC------
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DS---SHLFALPGAGDANLRVFEADVLDSGAVSRAVEG------   80 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------   80 (331)
                      ++|||||+|-||..+++.|.+.+..+|+.+.|+.. ..   ..+.++...+. .+.++.+|++|++++.+++++      
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~-~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGA-RVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT--EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCC-ceeeeccCccCHHHHHHHHHHHHhccC
Confidence            68999999999999999999998668999999832 11   12222222222 899999999999999988853      


Q ss_pred             -ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           81 -CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        81 -~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                       ++.|||+|+.....    ...+.....+...+.++.+|.++.....++.||.+||..++.+.++.              
T Consensus        81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq--------------  146 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQ--------------  146 (181)
T ss_dssp             -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTB--------------
T ss_pred             CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcch--------------
Confidence             58999999876432    12223366677789999999999988889999999999888887764              


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPA  192 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~  192 (331)
                            ..|+......+.+..... ..|.+++++..+
T Consensus       147 ------~~YaaAN~~lda~a~~~~-~~g~~~~sI~wg  176 (181)
T PF08659_consen  147 ------SAYAAANAFLDALARQRR-SRGLPAVSINWG  176 (181)
T ss_dssp             ------HHHHHHHHHHHHHHHHHH-HTTSEEEEEEE-
T ss_pred             ------HhHHHHHHHHHHHHHHHH-hCCCCEEEEEcc
Confidence                  379999999888877554 568898888754

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.56  E-value=2.3e-13  Score=118.81  Aligned_cols=211  Identities=24%  Similarity=0.172  Sum_probs=133.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh-cC----cc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-EG----CK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~----~d   82 (331)
                      ++++|||+||||.+|+-+++.|++.|+ .|.++.|+......+........ ....+..|.....+...-+ +.    ..
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf-~vra~VRd~~~a~~~~~~~~~d~-~~~~v~~~~~~~~d~~~~~~~~~~~~~~  155 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGF-SVRALVRDEQKAEDLLGVFFVDL-GLQNVEADVVTAIDILKKLVEAVPKGVV  155 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCC-eeeeeccChhhhhhhhccccccc-ccceeeeccccccchhhhhhhhccccce
Confidence            457999999999999999999999999 99999998877666544222222 4555666665554433332 22    34


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      +++-+++-....  . +...-+.+...|++|+++||+.+|++|+|++||.+.--.+..         .  +..   ....
T Consensus       156 ~v~~~~ggrp~~--e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~---------~--~~~---~~~~  218 (411)
T KOG1203|consen  156 IVIKGAGGRPEE--E-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQP---------P--NIL---LLNG  218 (411)
T ss_pred             eEEecccCCCCc--c-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCC---------c--hhh---hhhh
Confidence            566555543321  1 122334566789999999999999999999987633111110         0  000   0011


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHh
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLL  241 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~  241 (331)
                      .+-..|+.+|+.+.    +.|++++++|++...-.........        ....+.. .++..--.+.-.|+|+..+.+
T Consensus       219 ~~~~~k~~~e~~~~----~Sgl~ytiIR~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~r~~vael~~~a  286 (411)
T KOG1203|consen  219 LVLKAKLKAEKFLQ----DSGLPYTIIRPGGLEQDTGGQREVV--------VDDEKELLTVDGGAYSISRLDVAELVAKA  286 (411)
T ss_pred             hhhHHHHhHHHHHH----hcCCCcEEEeccccccCCCCcceec--------ccCccccccccccceeeehhhHHHHHHHH
Confidence            35578888888776    7899999999997765432111000        0011111 111111367888999999999


Q ss_pred             hcCCCCCc
Q 020110          242 FESPAASG  249 (331)
Q Consensus       242 l~~~~~~g  249 (331)
                      +.......
T Consensus       287 ll~~~~~~  294 (411)
T KOG1203|consen  287 LLNEAATF  294 (411)
T ss_pred             Hhhhhhcc
Confidence            98887665

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.56  E-value=2.8e-13  Score=116.45  Aligned_cols=185  Identities=19%  Similarity=0.108  Sum_probs=130.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh-hcCC-CCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALP-GAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ..++++|||||..||..+++.|...|. +|+...|+....... +.+. +....++.++++|+++..++.++.+      
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga-~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGA-HVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            347899999999999999999999999 999999986332222 2221 1222278889999999999987764      


Q ss_pred             -CccEEEEcccCCCCCC--CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 -GCKGVFHVASPCTLED--PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                       ..|+.|++||+.....  ..+..+..+.+|..|...|.+..    +.....|+|++||...  .........-.|....
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~--~~~~~~~~l~~~~~~~  190 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG--GGKIDLKDLSGEKAKL  190 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc--cCccchhhccchhccC
Confidence             3699999999887633  33446888999988887776654    4444479999999633  1111101111122110


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQ  200 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~  200 (331)
                      ....     ..|+.||........+++++.  |+.+..+.||.+.++...
T Consensus       191 ~~~~-----~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~  235 (314)
T KOG1208|consen  191 YSSD-----AAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLS  235 (314)
T ss_pred             ccch-----hHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccccee
Confidence            1111     149999999999998888665  699999999999988543

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.55  E-value=1.1e-13  Score=104.70  Aligned_cols=159  Identities=18%  Similarity=0.192  Sum_probs=120.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      +||..+|.||||-.|+.|++++++++ +..|+++.|+.........       .+.....|....++.....+++|+.+.
T Consensus        17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k-------~v~q~~vDf~Kl~~~a~~~qg~dV~Fc   89 (238)
T KOG4039|consen   17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDK-------VVAQVEVDFSKLSQLATNEQGPDVLFC   89 (238)
T ss_pred             hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccc-------eeeeEEechHHHHHHHhhhcCCceEEE
Confidence            57899999999999999999999987 5689999887533222221       677778898888888888889999998


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +-|..-....   .+..+++.-...+.+.++|++.|+++|+.+||.++   +++.                   .-.|..
T Consensus        90 aLgTTRgkaG---adgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA---d~sS-------------------rFlY~k  144 (238)
T KOG4039|consen   90 ALGTTRGKAG---ADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA---DPSS-------------------RFLYMK  144 (238)
T ss_pred             eecccccccc---cCceEeechHHHHHHHHHHHhCCCeEEEEEeccCC---Cccc-------------------ceeeee
Confidence            8876544222   23445556667778999999999999999999743   2221                   126999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCC
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP  201 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~  201 (331)
                      .|.+.|+-+.++.   --+++|+|||.+.|.....
T Consensus       145 ~KGEvE~~v~eL~---F~~~~i~RPG~ll~~R~es  176 (238)
T KOG4039|consen  145 MKGEVERDVIELD---FKHIIILRPGPLLGERTES  176 (238)
T ss_pred             ccchhhhhhhhcc---ccEEEEecCcceecccccc
Confidence            9999998876541   2478999999999987543

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.53  E-value=4.2e-14  Score=119.05  Aligned_cols=210  Identities=19%  Similarity=0.190  Sum_probs=142.3

Q ss_pred             Ccc--hHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHh--------cCccEE
Q 020110           16 GAN--GFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAV--------EGCKGV   84 (331)
Q Consensus        16 Gat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------~~~d~v   84 (331)
                      |++  +-||.+++++|+++|+ +|++.+|+..+. ..+.++.+..  +.+++.+|+++++++.+++        ..+|++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga-~V~~~~~~~~~~~~~~~~l~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGA-NVILTDRNEEKLADALEELAKEY--GAEVIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTE-EEEEEESSHHHHHHHHHHHHHHT--TSEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHc--CCceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            566  9999999999999999 999999987652 2222222111  3446999999998887774        357999


Q ss_pred             EEcccCCCC----CC----CCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           85 FHVASPCTL----ED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        85 ih~a~~~~~----~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      ||+++....    ..    ..+.....+++|+.+...+++++...  .-..+|++||.....+.++.             
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~-------------  144 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGY-------------  144 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTT-------------
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccc-------------
Confidence            999987653    11    12334778899999999998887443  22579999987443222211             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                             ..|+.+|...+.+.+.++.+    +||++.++.||.+..+.... ......+........+      ...+..
T Consensus       145 -------~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~-~~~~~~~~~~~~~~~p------l~r~~~  210 (241)
T PF13561_consen  145 -------SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER-IPGNEEFLEELKKRIP------LGRLGT  210 (241)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH-HHTHHHHHHHHHHHST------TSSHBE
T ss_pred             -------hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhc-cccccchhhhhhhhhc------cCCCcC
Confidence                   27999999999998877643    58999999999988764211 0001222233332222      234579


Q ss_pred             HHHHHHHHHHhhcCC--CCCceEEEec
Q 020110          231 VKDVAKAQVLLFESP--AASGRYLCTN  255 (331)
Q Consensus       231 v~D~a~a~~~~l~~~--~~~g~~~~~~  255 (331)
                      .+|+|.++..++...  ...|..+..+
T Consensus       211 ~~evA~~v~fL~s~~a~~itG~~i~vD  237 (241)
T PF13561_consen  211 PEEVANAVLFLASDAASYITGQVIPVD  237 (241)
T ss_dssp             HHHHHHHHHHHHSGGGTTGTSEEEEES
T ss_pred             HHHHHHHHHHHhCccccCccCCeEEEC
Confidence            999999999999754  4567554433

...

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.53  E-value=1.8e-13  Score=106.37  Aligned_cols=165  Identities=18%  Similarity=0.122  Sum_probs=116.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ...+||||||+..||..|+++|++.|. +|++..|+............    .+..+.+|+.|.++.+++++       .
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p----~~~t~v~Dv~d~~~~~~lvewLkk~~P~   78 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENP----EIHTEVCDVADRDSRRELVEWLKKEYPN   78 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCc----chheeeecccchhhHHHHHHHHHhhCCc
Confidence            345899999999999999999999999 99999998766555443322    67788899999887776654       3


Q ss_pred             ccEEEEcccCCCCCCCC------CchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           81 CKGVFHVASPCTLEDPV------DPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .+++|||||+.......      ++..+.+++|..++.+|..+.-.+    .-..+|.+||.-+.-+...          
T Consensus        79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~----------  148 (245)
T COG3967          79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAS----------  148 (245)
T ss_pred             hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccc----------
Confidence            69999999986542221      222556788988888877765433    3346999998644332222          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHH---HHHHcCCeEEEEcCCcccCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWE---FAEKHGVDVVAIHPATCLGP  197 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~---~~~~~~~~~~~lR~~~v~G~  197 (331)
                        .|        .|-.+|...+-+-..   ..+..+++++=+-|+.|-.+
T Consensus       149 --~P--------vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         149 --TP--------VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             --cc--------cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence              12        466666665544332   33456899999999998775

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.50  E-value=1.5e-12  Score=109.53  Aligned_cols=194  Identities=14%  Similarity=0.082  Sum_probs=127.1

Q ss_pred             HHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----CccEEEEcccCCCCCCCCCch
Q 020110           25 LVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCKGVFHVASPCTLEDPVDPE  100 (331)
Q Consensus        25 l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vih~a~~~~~~~~~~~~  100 (331)
                      ++++|+++|+ +|++++|+.....           ..+++++|++|.+++.++++    ++|+|||+||...    ..+.
T Consensus         1 ~a~~l~~~G~-~Vv~~~r~~~~~~-----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~~   64 (241)
T PRK12428          1 TARLLRFLGA-RVIGVDRREPGMT-----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAPV   64 (241)
T ss_pred             ChHHHHhCCC-EEEEEeCCcchhh-----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCCH
Confidence            4788999999 9999998765421           23467899999999888876    4899999999753    2346


Q ss_pred             hhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCC----CCCCh--h----hhhccCcchhHHH
Q 020110          101 KELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDET----SWTDL--E----YCKSRKKWYPVSK  168 (331)
Q Consensus       101 ~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~----~~~~~--~----~~~~~~~~y~~sK  168 (331)
                      ...+++|+.++..+++++...  ..+++|++||..++. .+..  .+..|.    .....  .    ........|+.+|
T Consensus        65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  141 (241)
T PRK12428         65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAE-WPQR--LELHKALAATASFDEGAAWLAAHPVALATGYQLSK  141 (241)
T ss_pred             HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhc-cccc--hHHHHhhhccchHHHHHHhhhccCCCcccHHHHHH
Confidence            788999999999999988654  236899999985543 1111  111111    00000  0    0011224799999


Q ss_pred             HHHHHHHHHHH----HHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcC
Q 020110          169 TLAEKAAWEFA----EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       169 ~~~e~~~~~~~----~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      ...+.+.+.++    ..+|+++++++||.+.++...........  ..... ..  .  ....+...+|+|+++.+++..
T Consensus       142 ~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~--~~~~~-~~--~--~~~~~~~pe~va~~~~~l~s~  214 (241)
T PRK12428        142 EALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQ--ERVDS-DA--K--RMGRPATADEQAAVLVFLCSD  214 (241)
T ss_pred             HHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhh--Hhhhh-cc--c--ccCCCCCHHHHHHHHHHHcCh
Confidence            99998888777    34589999999999998853221000000  00000 00  0  122356789999999988754

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.50  E-value=6.8e-13  Score=104.94  Aligned_cols=172  Identities=21%  Similarity=0.173  Sum_probs=117.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++.|+||||+..||..|+++|++. |...+++..|+++.. ..++....... +++.++.|+++.+++.++.+       
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~-rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDS-RVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCC-ceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            457999999999999999999985 662444555556653 22333222233 99999999999888777664       


Q ss_pred             --CccEEEEcccCCCCCCC-----CCchhhhhHHHHHHHHHHHHHH----HhCCCC-----------EEEEeCccceecc
Q 020110           80 --GCKGVFHVASPCTLEDP-----VDPEKELILPAVQGTLNVLEAA----KRFGVR-----------RVVVTSSISAIVP  137 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~-----------~~v~~SS~~~~~~  137 (331)
                        +.+.+|++||....-..     .......+++|+.++..+.+++    ++...+           .+|++||...-.+
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence              46999999997654221     1223677899988877766654    222222           5898998644211


Q ss_pred             CCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCC
Q 020110          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPL  198 (331)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~  198 (331)
                      ..           ...+.      ..|.+||.+...+.+..+-+   .++-++.+.||+|-...
T Consensus       162 ~~-----------~~~~~------~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDM  208 (249)
T KOG1611|consen  162 GF-----------RPGGL------SAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDM  208 (249)
T ss_pred             CC-----------CCcch------hhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCC
Confidence            10           01111      37999999999998887633   46788899999997664

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.49  E-value=1.3e-12  Score=103.37  Aligned_cols=218  Identities=19%  Similarity=0.170  Sum_probs=141.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCC-CCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +.|++++|||.|.||..++++|+++|. .+.+..-+........++... ....+-++++|+.+..++++.++       
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~kgi-k~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEKGI-KVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHcCc-hheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999998 666665544443333333222 12268899999999988888775       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHH----HHHHHhC--C-CCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNV----LEAAKRF--G-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l----~~~~~~~--~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      .+|++||.||...    ..+++..+.+|..|..+=    +....+.  | -.-+|..||....++.+.            
T Consensus        83 ~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~------------  146 (261)
T KOG4169|consen   83 TIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPV------------  146 (261)
T ss_pred             ceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcccc------------
Confidence            3799999999865    455788999997665554    4443332  1 235889999765554433            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHc-CCCCccCc------CC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ-GSKDTQEY------HW  225 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~  225 (331)
                      .|.|+++++..-+.++.++..+   |..+.|+++..+-|+.+-..-           +..+.. +.-..+.+      ..
T Consensus       147 ~pVY~AsKaGVvgFTRSla~~a---yy~~sGV~~~avCPG~t~t~l-----------~~~~~~~~~~~e~~~~~~~~l~~  212 (261)
T KOG4169|consen  147 FPVYAASKAGVVGFTRSLADLA---YYQRSGVRFNAVCPGFTRTDL-----------AENIDASGGYLEYSDSIKEALER  212 (261)
T ss_pred             chhhhhcccceeeeehhhhhhh---hHhhcCEEEEEECCCcchHHH-----------HHHHHhcCCcccccHHHHHHHHH
Confidence            2455555555555555555432   334779999999998664331           111111 11111111      12


Q ss_pred             CCceeHHHHHHHHHHhhcCCCCCceEEEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESPAASGRYLCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~~~g~~~~~~~  256 (331)
                      ..-....+++..++.+++.+..+.+|.++..
T Consensus       213 ~~~q~~~~~a~~~v~aiE~~~NGaiw~v~~g  243 (261)
T KOG4169|consen  213 APKQSPACCAINIVNAIEYPKNGAIWKVDSG  243 (261)
T ss_pred             cccCCHHHHHHHHHHHHhhccCCcEEEEecC
Confidence            2345678899999999998765558876543

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.48  E-value=9.5e-13  Score=111.51  Aligned_cols=170  Identities=21%  Similarity=0.185  Sum_probs=120.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc--cchhhcCCCCCC-CcEEEEEccCCC-chHHHHHhc----
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGD-ANLRVFEADVLD-SGAVSRAVE----   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~Dl~~-~~~~~~~~~----   79 (331)
                      ++|+||||||++.||..+++.|.+.|+ .|++..|+...  ...........+ ..+.+..+|+++ .+++..+++    
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGA-RVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999 88877776543  111111111111 157788899998 877766653    


Q ss_pred             ---CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ---~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                         .+|++||+|+....     +...+.....+++|+.+...+.+++... .-+++|++||.... ..+..         
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~---------  152 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG---------  152 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC---------
Confidence               37999999997542     2233456888999999988888744322 11189999997543 22210         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPL  198 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~  198 (331)
                                ...|+.||...+.+.+.++.+   +|+++..+.||.+-.+.
T Consensus       153 ----------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~  193 (251)
T COG1028         153 ----------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPM  193 (251)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcc
Confidence                      137999999999888887744   58999999999665443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.47  E-value=3.2e-13  Score=105.53  Aligned_cols=171  Identities=20%  Similarity=0.226  Sum_probs=123.2

Q ss_pred             CCcccccCCCeEEEeCc-chHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc
Q 020110            1 MASEAEKEEETVCVTGA-NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGa-tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      |+.|+.  -|.|||||+ .|.||.+|++.|.++|+ .|++..|+.+.-..+....     ++.....|+++++++.++..
T Consensus         1 ~e~~~~--~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~   72 (289)
T KOG1209|consen    1 SELQSQ--PKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSG   72 (289)
T ss_pred             CCcccC--CCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHH
Confidence            344543  368999875 69999999999999999 9999999766544444211     68889999999998887664


Q ss_pred             --------CccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCc
Q 020110           80 --------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGK  144 (331)
Q Consensus        80 --------~~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~  144 (331)
                              ..|+++|+||..-.    +..-...+..+++|+.|..++.++....   .-..+|+++|..++-+.+-.   
T Consensus        73 evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~---  149 (289)
T KOG1209|consen   73 EVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFG---  149 (289)
T ss_pred             HHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchh---
Confidence                    26999999987543    2222334778999999888887776533   12479999998555443321   


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHH---HHcCCeEEEEcCCcccCCCC
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~~~~~~lR~~~v~G~~~  199 (331)
                                       +.|..||.+...+.+.+.   +-+|++++.+-+|.|-..-.
T Consensus       150 -----------------~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia  190 (289)
T KOG1209|consen  150 -----------------SIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIA  190 (289)
T ss_pred             -----------------hhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccc
Confidence                             379999999887766543   23478888888887766543

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.47  E-value=5.7e-12  Score=108.67  Aligned_cols=219  Identities=11%  Similarity=0.069  Sum_probs=131.2

Q ss_pred             ccCCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCC--------CccchhhcC-CCCCCC-----cEEEEEccCC
Q 020110            6 EKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPG--------SDSSHLFAL-PGAGDA-----NLRVFEADVL   69 (331)
Q Consensus         6 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~--------~~~~~~~~~-~~~~~~-----~~~~~~~Dl~   69 (331)
                      ..++|.++||||+  .-||+++++.|.++|+ +|++.+|.+        ......... ....+.     .+..+..|+.
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga-~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~   83 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGA-TILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD   83 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCC-EEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence            3457899999995  8999999999999999 998865431        000000000 000000     0011123333


Q ss_pred             Cch------------------HHHHHh-------cCccEEEEcccCCC--C----CCCCCchhhhhHHHHHHHHHHHHHH
Q 020110           70 DSG------------------AVSRAV-------EGCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAA  118 (331)
Q Consensus        70 ~~~------------------~~~~~~-------~~~d~vih~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~  118 (331)
                      +.+                  ++++++       .++|++||+||...  .    +...+++...+++|+.++.++.+++
T Consensus        84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~  163 (299)
T PRK06300         84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF  163 (299)
T ss_pred             CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            332                  234333       34899999997532  1    2223455788999999999999887


Q ss_pred             HhC--CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH----cCCeEEEEcCC
Q 020110          119 KRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPA  192 (331)
Q Consensus       119 ~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~  192 (331)
                      ...  .-.++|++||.....+.+..                   ...|+.+|...+.+.+.++.+    +|+++..+.||
T Consensus       164 ~p~m~~~G~ii~iss~~~~~~~p~~-------------------~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG  224 (299)
T PRK06300        164 GPIMNPGGSTISLTYLASMRAVPGY-------------------GGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAG  224 (299)
T ss_pred             HHHhhcCCeEEEEeehhhcCcCCCc-------------------cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeC
Confidence            654  22578998886443322211                   016999999999988888754    37999999999


Q ss_pred             cccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          193 TCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       193 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      .+-.+.... ..............  .+    ...+...+|++.++.+++...  ...|..
T Consensus       225 ~v~T~~~~~-~~~~~~~~~~~~~~--~p----~~r~~~peevA~~v~~L~s~~~~~itG~~  278 (299)
T PRK06300        225 PLASRAGKA-IGFIERMVDYYQDW--AP----LPEPMEAEQVGAAAAFLVSPLASAITGET  278 (299)
T ss_pred             CccChhhhc-ccccHHHHHHHHhc--CC----CCCCcCHHHHHHHHHHHhCccccCCCCCE
Confidence            987764321 00001111111111  11    123567899999999888653  244543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.46  E-value=1.2e-12  Score=138.13  Aligned_cols=169  Identities=20%  Similarity=0.192  Sum_probs=129.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCcc-----------c---------------------------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDS-----------S---------------------------   48 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~-----------~---------------------------   48 (331)
                      +.+.+|||||+|.||..++++|.++ |. +|+++.|+....           .                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga-~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQA-HFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCC-EEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            3579999999999999999999998 58 999999873100           0                           


Q ss_pred             ----------hhhcCCCCCCCcEEEEEccCCCchHHHHHhc------CccEEEEcccCCCC----CCCCCchhhhhHHHH
Q 020110           49 ----------HLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCKGVFHVASPCTL----EDPVDPEKELILPAV  108 (331)
Q Consensus        49 ----------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~vih~a~~~~~----~~~~~~~~~~~~~n~  108 (331)
                                .+..+.. .+..+.++.+|++|.+++.++++      .+|.|||+||....    +...++....+++|+
T Consensus      2075 ~~~~~~ei~~~la~l~~-~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKA-AGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             ccchhHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence                      0000111 12268899999999998887764      47999999997543    223345678899999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc-CCeEE
Q 020110          109 QGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVV  187 (331)
Q Consensus       109 ~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~~~~~  187 (331)
                      .|+.++++++.....++||++||..+.++..+.                    ..|+.+|...+.+.+.++.+. +++++
T Consensus      2154 ~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~gq--------------------s~YaaAkaaL~~la~~la~~~~~irV~ 2213 (2582)
T TIGR02813      2154 DGLLSLLAALNAENIKLLALFSSAAGFYGNTGQ--------------------SDYAMSNDILNKAALQLKALNPSAKVM 2213 (2582)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEechhhcCCCCCc--------------------HHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence            999999999987777789999998887766553                    369999999888888777554 68999


Q ss_pred             EEcCCcccCCC
Q 020110          188 AIHPATCLGPL  198 (331)
Q Consensus       188 ~lR~~~v~G~~  198 (331)
                      .+.+|.+-|+.
T Consensus      2214 sI~wG~wdtgm 2224 (2582)
T TIGR02813      2214 SFNWGPWDGGM 2224 (2582)
T ss_pred             EEECCeecCCc
Confidence            99998876653

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.42  E-value=7.3e-12  Score=104.15  Aligned_cols=206  Identities=21%  Similarity=0.171  Sum_probs=142.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCC--CcEEEEEccCCCchHHHHHhcC-------
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGD--ANLRVFEADVLDSGAVSRAVEG-------   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~-------   80 (331)
                      .+|+||||+.-+|..++..+..+|+ +|+++.|+..+...+....+...  ..+.+..+|+.|.+++...+++       
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga-~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGA-DVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccC-ceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            5899999999999999999999999 99999998766555443322211  0366888999999988877753       


Q ss_pred             ccEEEEcccCCCCCCCCC----chhhhhHHHHHHHHHHHHHHHhC-----CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTLEDPVD----PEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|.+|||||........+    .....+++|..++.|+++++...     ...+++.+||..+.++-.+.          
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gy----------  182 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGY----------  182 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccc----------
Confidence            699999999766543332    23667899999999999876433     13389999998777765553          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHH---HHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                +.|..+|....-+.....   .++++.++..-|+.+-.|+.......- -...++.        +..-+.
T Consensus       183 ----------saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tk-P~~t~ii--------~g~ss~  243 (331)
T KOG1210|consen  183 ----------SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTK-PEETKII--------EGGSSV  243 (331)
T ss_pred             ----------cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccC-chheeee--------cCCCCC
Confidence                      256666665554443333   246899999999999888743211000 0011111        133455


Q ss_pred             eeHHHHHHHHHHhhcCC
Q 020110          229 VPVKDVAKAQVLLFESP  245 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~  245 (331)
                      +..+++|.+++.=+...
T Consensus       244 ~~~e~~a~~~~~~~~rg  260 (331)
T KOG1210|consen  244 IKCEEMAKAIVKGMKRG  260 (331)
T ss_pred             cCHHHHHHHHHhHHhhc
Confidence            88999999987665543

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.42  E-value=2.8e-13  Score=102.38  Aligned_cols=208  Identities=17%  Similarity=0.119  Sum_probs=145.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC---ccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---CKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~v   84 (331)
                      .++.|++||+.-.||+.+++.|.+.|. +|+++.|++.....+-+....   -+..+.+|+++-+.+++.+..   +|.+
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p~---~I~Pi~~Dls~wea~~~~l~~v~pidgL   81 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETPS---LIIPIVGDLSAWEALFKLLVPVFPIDGL   81 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCCc---ceeeeEecccHHHHHHHhhcccCchhhh
Confidence            467999999999999999999999999 999999988766555443221   488999999998888888754   6999


Q ss_pred             EEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHhC-----CCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           85 FHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        85 ih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      +|+||.-..    .-..++.+..|++|+.++.++.+...+.     .-..+|.+||.+..        ++++..      
T Consensus        82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~--------R~~~nH------  147 (245)
T KOG1207|consen   82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI--------RPLDNH------  147 (245)
T ss_pred             hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc--------cccCCc------
Confidence            999986432    2233445677899999888887764322     12359999997442        223322      


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHH
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  232 (331)
                            ..|..+|.+.+.+-+-.+-+.   +|++..+-|..|....-...+. .+..-.+++...      ..--|..++
T Consensus       148 ------tvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWS-DP~K~k~mL~ri------Pl~rFaEV~  214 (245)
T KOG1207|consen  148 ------TVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWS-DPDKKKKMLDRI------PLKRFAEVD  214 (245)
T ss_pred             ------eEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccC-CchhccchhhhC------chhhhhHHH
Confidence                  268888888777777666554   5889999999998764322211 111111222221      123578899


Q ss_pred             HHHHHHHHhhcCCC
Q 020110          233 DVAKAQVLLFESPA  246 (331)
Q Consensus       233 D~a~a~~~~l~~~~  246 (331)
                      .++.++..++....
T Consensus       215 eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  215 EVVNAVLFLLSDNS  228 (245)
T ss_pred             HHHhhheeeeecCc
Confidence            99999999887654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.40  E-value=1.5e-11  Score=102.60  Aligned_cols=167  Identities=25%  Similarity=0.289  Sum_probs=122.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ...|-|||||.-...|..|+++|.++|+ .|++..-.+.....+..... .+ +...++.|+++++++.++.+       
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~-s~-rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETK-SP-RLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhc-CC-cceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            3456799999999999999999999999 99998765554444443332 22 78899999999999987764       


Q ss_pred             --CccEEEEcccCCCC---CC--CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 --GCKGVFHVASPCTL---ED--PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 --~~d~vih~a~~~~~---~~--~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                        +.-.||||||....   ..  ..++....+++|..|+..+.++.    +++. .|+|++||..+-.+.+.        
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~--------  174 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPA--------  174 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcc--------
Confidence              35789999995532   11  12445778999988877766654    4443 58999999754222111        


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGP  197 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~  197 (331)
                                  ..+|..||...|.+.....+   .+|+++.++-||.+-.+
T Consensus       175 ------------~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~  214 (322)
T KOG1610|consen  175 ------------LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTN  214 (322)
T ss_pred             ------------cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccc
Confidence                        14899999999988876653   46999999999954444

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.31  E-value=2.4e-11  Score=104.91  Aligned_cols=180  Identities=17%  Similarity=0.095  Sum_probs=122.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .+|+||+|+|++|.||+.++..|...+. +++..++++... .....+...   .......+.+|+.++.+.++++|+||
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~-g~a~Dl~~~---~~~~~v~~~td~~~~~~~l~gaDvVV   81 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP-GVAADLSHI---DTPAKVTGYADGELWEKALRGADLVL   81 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc-ccccchhhc---CcCceEEEecCCCchHHHhCCCCEEE
Confidence            4688999999999999999999986652 388988883221 111111111   11233456666666677899999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      ++||....  ......+.+..|+..+.++++++++++++++|+++|..+ ..........+.+.....|      ...||
T Consensus        82 itaG~~~~--~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPv-dv~~~~~~~~~~~~sg~p~------~~viG  152 (321)
T PTZ00325         82 ICAGVPRK--PGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV-NSTVPIAAETLKKAGVYDP------RKLFG  152 (321)
T ss_pred             ECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH-HHHHHHHHhhhhhccCCCh------hheee
Confidence            99997543  223467889999999999999999999999999998532 1111000000112222222      24788


Q ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCC
Q 020110          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~  200 (331)
                      .+-+..-++-...++..+++...++ +.|+|.+-.
T Consensus       153 ~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        153 VTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             chhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            8867777777777888899888888 889998754

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.25  E-value=4.8e-11  Score=94.63  Aligned_cols=210  Identities=20%  Similarity=0.122  Sum_probs=133.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      .+-+||||++..||..++..+++.+- +.....++..... ...+.-..+...-+..+|+.....+.++.+       +-
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~-e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDD-EALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcch-HHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            35689999999999999999999886 4333333222211 111100000012233355554443333332       36


Q ss_pred             cEEEEcccCCCCC-------CCCCchhhhhHHHHHHHHHHHHHHHhC--CC---CEEEEeCccceeccCCCCCCccccCC
Q 020110           82 KGVFHVASPCTLE-------DPVDPEKELILPAVQGTLNVLEAAKRF--GV---RRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        82 d~vih~a~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~---~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                      |.|||+||.....       ...+.+..+|+.|+.+...|...+...  +.   +.+|++||..++.+..++        
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~w--------  155 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSW--------  155 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHH--------
Confidence            9999999976541       234456889999999998888866544  22   568999998777665554        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCC-----CCC-hhHHHHHHHHcCCCCcc
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQP-----YLN-ASCAVLQQLLQGSKDTQ  221 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~-----~~~-~~~~~~~~~~~~~~~~~  221 (331)
                                  ..|..+|++.+.+++..+.+.  ++++..++||.+=.+.+..     .+. .....++.....     
T Consensus       156 ------------a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~-----  218 (253)
T KOG1204|consen  156 ------------AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES-----  218 (253)
T ss_pred             ------------HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc-----
Confidence                        379999999999999987443  8899999999887664321     111 112223333332     


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCC-CCCc
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESP-AASG  249 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~-~~~g  249 (331)
                          -..+...+.|+.+..+++.. ...|
T Consensus       219 ----~~ll~~~~~a~~l~~L~e~~~f~sG  243 (253)
T KOG1204|consen  219 ----GQLLDPQVTAKVLAKLLEKGDFVSG  243 (253)
T ss_pred             ----CCcCChhhHHHHHHHHHHhcCcccc
Confidence                34567788888888877765 4444

>PLN00106 malate dehydrogenase

Probab=99.21  E-value=1.7e-10  Score=99.77  Aligned_cols=175  Identities=19%  Similarity=0.122  Sum_probs=120.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      +||+|+|++|.||+.++..|...+. +++..+++++ .......+...   .......++.+.+++.+.++++|+|||+|
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~a~Dl~~~---~~~~~i~~~~~~~d~~~~l~~aDiVVitA   94 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGVAADVSHI---NTPAQVRGFLGDDQLGDALKGADLVIIPA   94 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCeeEchhhhC---CcCceEEEEeCCCCHHHHcCCCCEEEEeC
Confidence            5899999999999999999987763 3788888866 22211122111   11122335445556778899999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      |....  ......+.+..|...++++.+.+++++.+.+|+++|--+-...+ .-...+......      ++...||.++
T Consensus        95 G~~~~--~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~-i~t~~~~~~s~~------p~~~viG~~~  165 (323)
T PLN00106         95 GVPRK--PGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVP-IAAEVLKKAGVY------DPKKLFGVTT  165 (323)
T ss_pred             CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHH-HHHHHHHHcCCC------CcceEEEEec
Confidence            97543  23446888999999999999999999999999988853310000 000011111211      2234799999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~  198 (331)
                      +..+++-..+++..+++...++ +.|+|.+
T Consensus       166 LDs~Rl~~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        166 LDVVRANTFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             chHHHHHHHHHHHhCCChhheE-EEEEEeC
Confidence            9999999999999999988885 5677776

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.19  E-value=7.7e-11  Score=98.28  Aligned_cols=169  Identities=13%  Similarity=0.112  Sum_probs=121.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC-CCCCCcEEEEEccCCCchH----HHHHhcC--cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-GAGDANLRVFEADVLDSGA----VSRAVEG--CK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~----~~~~~~~--~d   82 (331)
                      .=.+|||||..||+..+++|.++|. +|+.++|+.++.+...+.. ...+.+++++..|..+.+.    +.+.+.+  +.
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg  128 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG  128 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence            3579999999999999999999999 9999999988766555322 2222378899999987765    4455554  56


Q ss_pred             EEEEcccCCCC--CCCCC----chhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           83 GVFHVASPCTL--EDPVD----PEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        83 ~vih~a~~~~~--~~~~~----~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      ++|||+|+...  ....+    .....+.+|+.++..+.+.....    +-..+|++||..+..+.+..           
T Consensus       129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~-----------  197 (312)
T KOG1014|consen  129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLL-----------  197 (312)
T ss_pred             EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhH-----------
Confidence            79999998762  11111    23556778888877776665333    33469999997554433332           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~  199 (331)
                               ..|+.+|...+.+-..+.++   +|+.+-.+-|..|-++..
T Consensus       198 ---------s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~  238 (312)
T KOG1014|consen  198 ---------SVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA  238 (312)
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence                     37999999887776655544   589999999999988764

>PRK06720 hypothetical protein; Provisional

Probab=99.17  E-value=3.8e-10  Score=88.96  Aligned_cols=126  Identities=11%  Similarity=0.071  Sum_probs=80.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh-hcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +.+.++||||+|.||+.+++.|.+.|+ +|++.+|+....... .++..... .+.++.+|+++.+++.++++       
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGG-EALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            347899999999999999999999999 999998875433221 12211122 57788999999988777552       


Q ss_pred             CccEEEEcccCCCCCCCC-C-chhhhhHHHHHHHHHHH----HHHHhC-------CCCEEEEeCcccee
Q 020110           80 GCKGVFHVASPCTLEDPV-D-PEKELILPAVQGTLNVL----EAAKRF-------GVRRVVVTSSISAI  135 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~~~-~-~~~~~~~~n~~~~~~l~----~~~~~~-------~~~~~v~~SS~~~~  135 (331)
                      ++|++||+||........ + ........|+.++....    ...++.       ...||..+||.++.
T Consensus        93 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         93 RIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             CCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            589999999975532211 1 11112233344333333    322222       34688888887553

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.13  E-value=3.8e-10  Score=89.44  Aligned_cols=101  Identities=9%  Similarity=0.083  Sum_probs=75.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC-------cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------CK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~d   82 (331)
                      |+++|||||||+|. +++.|.++|+ +|++.+|++.....+........ ++.++.+|++|++++.+++++       +|
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~-~V~v~~R~~~~~~~l~~~l~~~~-~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGF-HVSVIARREVKLENVKRESTTPE-SITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcC-EEEEEECCHHHHHHHHHHhhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            47999999999886 9999999999 99999987654443332111112 688899999999988877753       46


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC----EEEEeCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR----RVVVTSS  131 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~v~~SS  131 (331)
                      .+|+.+-                  +.++.++.++|++.+++    +|+|+=.
T Consensus        78 ~lv~~vh------------------~~~~~~~~~~~~~~gv~~~~~~~~h~~g  112 (177)
T PRK08309         78 LAVAWIH------------------SSAKDALSVVCRELDGSSETYRLFHVLG  112 (177)
T ss_pred             EEEEecc------------------ccchhhHHHHHHHHccCCCCceEEEEeC
Confidence            6665432                  23466899999999998    8987654

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.97  E-value=2.9e-09  Score=93.30  Aligned_cols=98  Identities=23%  Similarity=0.317  Sum_probs=80.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ||+|||.|+ |+||+.++..|.+.| . +|++.+|+..+..........   +++.++.|+.|.+++.+++++.|+|||+
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~-~V~iAdRs~~~~~~i~~~~~~---~v~~~~vD~~d~~al~~li~~~d~VIn~   75 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDG-EVTIADRSKEKCARIAELIGG---KVEALQVDAADVDALVALIKDFDLVINA   75 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhhccc---cceeEEecccChHHHHHHHhcCCEEEEe
Confidence            679999999 999999999999998 6 999999998776666443211   7899999999999999999999999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      +.+..                  ..+++++|.+.|+. +|=+|
T Consensus        76 ~p~~~------------------~~~i~ka~i~~gv~-yvDts   99 (389)
T COG1748          76 APPFV------------------DLTILKACIKTGVD-YVDTS   99 (389)
T ss_pred             CCchh------------------hHHHHHHHHHhCCC-EEEcc
Confidence            87533                  23788999998864 55433

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.95  E-value=3e-09  Score=80.69  Aligned_cols=217  Identities=18%  Similarity=0.176  Sum_probs=137.9

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch-hhcCCCCCCCcEEEEEccCCCchHHHHHhc
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      |+..-+.+.-..|||||...+|..-++.|.++|. .|..++...++-.. .+++.   + ++-+...|++.++++..++.
T Consensus         1 ~sa~rs~kglvalvtggasglg~ataerlakqga-sv~lldlp~skg~~vakelg---~-~~vf~padvtsekdv~aala   75 (260)
T KOG1199|consen    1 MSALRSTKGLVALVTGGASGLGKATAERLAKQGA-SVALLDLPQSKGADVAKELG---G-KVVFTPADVTSEKDVRAALA   75 (260)
T ss_pred             CchhhhhcCeeEEeecCcccccHHHHHHHHhcCc-eEEEEeCCcccchHHHHHhC---C-ceEEeccccCcHHHHHHHHH
Confidence            3333344555789999999999999999999999 99999875554333 33332   2 88999999999999988774


Q ss_pred             -------CccEEEEcccCCCC----------CCCCCchhhhhHHHHHHHHHHHHHHHhC--------CCC--EEEEeCcc
Q 020110           80 -------GCKGVFHVASPCTL----------EDPVDPEKELILPAVQGTLNVLEAAKRF--------GVR--RVVVTSSI  132 (331)
Q Consensus        80 -------~~d~vih~a~~~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~--~~v~~SS~  132 (331)
                             ..|..+|||+.-..          ....++.+..+++|+.|+.|+++.....        +-.  -+|.+.|.
T Consensus        76 ~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasv  155 (260)
T KOG1199|consen   76 KAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASV  155 (260)
T ss_pred             HHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeecee
Confidence                   36999999986432          1122345778899999999998854311        112  35666665


Q ss_pred             ceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHH
Q 020110          133 SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAV  209 (331)
Q Consensus       133 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~  209 (331)
                      .++-+..+.                    ..|..||...--+-.-.++   ..|+++..+-|+.+-.|...    .++..
T Consensus       156 aafdgq~gq--------------------aaysaskgaivgmtlpiardla~~gir~~tiapglf~tplls----slpek  211 (260)
T KOG1199|consen  156 AAFDGQTGQ--------------------AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLS----SLPEK  211 (260)
T ss_pred             eeecCccch--------------------hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhh----hhhHH
Confidence            444333332                    2566666544332222222   45899999999877666432    23333


Q ss_pred             HHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCCCce
Q 020110          210 LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR  250 (331)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~  250 (331)
                      +...+.. .++++.   ..-|..+.+..+-.+++++...|.
T Consensus       212 v~~fla~-~ipfps---rlg~p~eyahlvqaiienp~lnge  248 (260)
T KOG1199|consen  212 VKSFLAQ-LIPFPS---RLGHPHEYAHLVQAIIENPYLNGE  248 (260)
T ss_pred             HHHHHHH-hCCCch---hcCChHHHHHHHHHHHhCcccCCe
Confidence            3333332 222222   234556777777778888877774

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.85  E-value=3.8e-08  Score=85.81  Aligned_cols=175  Identities=16%  Similarity=0.083  Sum_probs=102.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-------CCEEEEEecCCCccchhhcCC-CCCCCcEEEEEccCCCchHHHHHhcCc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN-------YTSINATVFPGSDSSHLFALP-GAGDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g-------~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      .+|+||||+|+||++++..|+..+       . +|+++++++... .+.... .... -......|+....++.+.++++
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~-el~L~D~~~~~~-~~~g~~~Dl~d-~~~~~~~~~~~~~~~~~~l~~a   79 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPV-ILHLLDIPPALK-ALEGVVMELQD-CAFPLLKSVVATTDPEEAFKDV   79 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCc-EEEEEEcCCccc-cccceeeehhh-ccccccCCceecCCHHHHhCCC
Confidence            379999999999999999999854       4 899998865321 111100 0000 0001223554456677888999


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCE-EEEeCccceeccCCCCCCccccCCCCCChhhhhc
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRR-VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~-~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (331)
                      |+|||+||....  ...+..+.++.|+.....+.+...++. .+- +|.+|...-+.      .....+.....|..   
T Consensus        80 DiVI~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~------t~~~~k~~~~~~~~---  148 (325)
T cd01336          80 DVAILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTN------ALILLKYAPSIPKE---  148 (325)
T ss_pred             CEEEEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHH------HHHHHHHcCCCCHH---
Confidence            999999997543  234468899999999999998888773 344 44444210000      00111211111110   


Q ss_pred             cCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCC
Q 020110          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (331)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~  200 (331)
                        ..-+.+.+..-++-...++..+++...++-..|+|.+..
T Consensus       149 --~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~  187 (325)
T cd01336         149 --NFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS  187 (325)
T ss_pred             --HEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC
Confidence              111223334444444555577888887777778887643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09620 hypothetical protein; Provisional

Probab=98.75  E-value=3.2e-08  Score=81.65  Aligned_cols=79  Identities=14%  Similarity=0.153  Sum_probs=54.6

Q ss_pred             CCeEEEeCcc----------------hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch
Q 020110            9 EETVCVTGAN----------------GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG   72 (331)
Q Consensus         9 ~~~vlVtGat----------------G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   72 (331)
                      .|+||||+|.                ||+|++|+++|++.|+ +|+++++.......  ....  ......+.+|....+
T Consensus         3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga-~V~li~g~~~~~~~--~~~~--~~~~~~V~s~~d~~~   77 (229)
T PRK09620          3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA-HVIYLHGYFAEKPN--DINN--QLELHPFEGIIDLQD   77 (229)
T ss_pred             CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC-eEEEEeCCCcCCCc--ccCC--ceeEEEEecHHHHHH
Confidence            5799999886                9999999999999999 99988753221111  0000  003445666433335


Q ss_pred             HHHHHhc--CccEEEEcccCCC
Q 020110           73 AVSRAVE--GCKGVFHVASPCT   92 (331)
Q Consensus        73 ~~~~~~~--~~d~vih~a~~~~   92 (331)
                      .+.+++.  ++|+|||+||...
T Consensus        78 ~l~~~~~~~~~D~VIH~AAvsD   99 (229)
T PRK09620         78 KMKSIITHEKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHhcccCCCEEEECccccc
Confidence            7777774  5899999999744

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.74  E-value=1.2e-07  Score=82.47  Aligned_cols=170  Identities=15%  Similarity=0.103  Sum_probs=110.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CC-----EEEEEecCCCc---cchhhcCCCCC---CCcEEEEEccCCCchHHHHH
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN-YT-----SINATVFPGSD---SSHLFALPGAG---DANLRVFEADVLDSGAVSRA   77 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g-~~-----~V~~~~r~~~~---~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~   77 (331)
                      +||.|+|++|.+|+.++..|+..| ..     ++..++++...   ......+....   ..++++     .  ....+.
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~--~~~~~~   75 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-----T--DDPNVA   75 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-----e--cCcHHH
Confidence            489999999999999999998877 34     68888774322   11111111100   001111     1  122356


Q ss_pred             hcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCC-CEEEEeCccceeccCCCCCCccccCCCC-CChh
Q 020110           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSW-TDLE  155 (331)
Q Consensus        78 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~E~~~-~~~~  155 (331)
                      ++++|+||.+||....  ...+..+.++.|+...+.+.+...+++. .-++.+-|--+     +.-......... ..  
T Consensus        76 ~~daDivvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv-----D~~t~~~~k~sg~~p--  146 (322)
T cd01338          76 FKDADWALLVGAKPRG--PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPC-----NTNALIAMKNAPDIP--  146 (322)
T ss_pred             hCCCCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcH-----HHHHHHHHHHcCCCC--
Confidence            7899999999997543  2344678899999999999999988863 44443333101     000000111110 11  


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~  199 (331)
                          +...||.+++..+++...+++..+++...+|..+|||++.
T Consensus       147 ----~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         147 ----PDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             ----hHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence                2247999999999999999999999999999989999984

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.70  E-value=2.8e-07  Score=74.60  Aligned_cols=178  Identities=20%  Similarity=0.183  Sum_probs=114.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCC----EEEEEecCCCccc----hhhcCCCCCCCcEEEEEccCCCchHHHHHhc--
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYT----SINATVFPGSDSS----HLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~----~V~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   79 (331)
                      |-+||||++..||-++|.+|++..-+    ++....|+.++..    .+..........++++..|++|..++.++.+  
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            46899999999999999999997531    4566667655432    2233333223378999999999888776654  


Q ss_pred             -----CccEEEEcccCCCCCC-------------------------------CCCchhhhhHHHHHHHHHHHHHHHhC--
Q 020110           80 -----GCKGVFHVASPCTLED-------------------------------PVDPEKELILPAVQGTLNVLEAAKRF--  121 (331)
Q Consensus        80 -----~~d~vih~a~~~~~~~-------------------------------~~~~~~~~~~~n~~~~~~l~~~~~~~--  121 (331)
                           ..|.|+-+||.+..+.                               ..+.-...++.||.|...++.-....  
T Consensus        84 ~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~  163 (341)
T KOG1478|consen   84 KQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLC  163 (341)
T ss_pred             HHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhh
Confidence                 4699999998754321                               12344678999999998887654332  


Q ss_pred             --CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccC
Q 020110          122 --GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLG  196 (331)
Q Consensus       122 --~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G  196 (331)
                        ....+|.+||..+   ..    +.+.=+|....    ....+|.-||+..+.+-....+..   |+..-++.||....
T Consensus       164 ~~~~~~lvwtSS~~a---~k----k~lsleD~q~~----kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt  232 (341)
T KOG1478|consen  164 HSDNPQLVWTSSRMA---RK----KNLSLEDFQHS----KGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTT  232 (341)
T ss_pred             cCCCCeEEEEeeccc---cc----ccCCHHHHhhh----cCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeec
Confidence              3348999998633   11    11221111110    112389999999987665544332   55666666665544


Q ss_pred             CC
Q 020110          197 PL  198 (331)
Q Consensus       197 ~~  198 (331)
                      ..
T Consensus       233 ~~  234 (341)
T KOG1478|consen  233 NS  234 (341)
T ss_pred             ch
Confidence            43

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.70  E-value=6.1e-08  Score=80.29  Aligned_cols=69  Identities=14%  Similarity=0.205  Sum_probs=48.6

Q ss_pred             CcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCC--chHHHHHhcCccEEEEcccCCC
Q 020110           16 GANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD--SGAVSRAVEGCKGVFHVASPCT   92 (331)
Q Consensus        16 GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~vih~a~~~~   92 (331)
                      .+|||+|++|+++|+++|+ +|+++.|........   .   . +++++.++..+  .+.+.+.+.++|+|||+||...
T Consensus        23 ~SSG~iG~aLA~~L~~~G~-~V~li~r~~~~~~~~---~---~-~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGH-EVTLVTTKTAVKPEP---H---P-NLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             ccchHHHHHHHHHHHhCCC-EEEEEECcccccCCC---C---C-CeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            4589999999999999999 999998754321100   0   1 56666654332  2455566778999999999754

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.70  E-value=1.3e-07  Score=79.22  Aligned_cols=96  Identities=18%  Similarity=0.144  Sum_probs=73.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~   87 (331)
                      |+|||+||||. |+.|++.|.+.|+ +|++..++......+...      +...+..+..+.+++.++++  ++|+||+.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~------g~~~v~~g~l~~~~l~~~l~~~~i~~VIDA   72 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGI-EILVTVTTSEGKHLYPIH------QALTVHTGALDPQELREFLKRHSIDILVDA   72 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCC-eEEEEEccCCcccccccc------CCceEEECCCCHHHHHHHHHhcCCCEEEEc
Confidence            48999999999 9999999999999 999999887655444432      23345566678888888885  48999998


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      +.++.               ...+.++.++|++.+++.+=|
T Consensus        73 tHPfA---------------~~is~~a~~a~~~~~ipylR~   98 (256)
T TIGR00715        73 THPFA---------------AQITTNATAVCKELGIPYVRF   98 (256)
T ss_pred             CCHHH---------------HHHHHHHHHHHHHhCCcEEEE
Confidence            75432               135778999999999875545

This enzyme was found to be a monomer by gel filtration.

>PRK05086 malate dehydrogenase; Provisional

Probab=98.65  E-value=5.7e-07  Score=78.09  Aligned_cols=171  Identities=15%  Similarity=0.102  Sum_probs=105.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHH-C--CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLD-N--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~-~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |||+|+||+|.+|++++..|.. .  ++ ++++++|++........+... . ....+.+  .+.+++.+.++++|+||.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~-el~L~d~~~~~~g~alDl~~~-~-~~~~i~~--~~~~d~~~~l~~~DiVIi   75 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGS-ELSLYDIAPVTPGVAVDLSHI-P-TAVKIKG--FSGEDPTPALEGADVVLI   75 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCcc-EEEEEecCCCCcceehhhhcC-C-CCceEEE--eCCCCHHHHcCCCCEEEE
Confidence            5899999999999999998855 2  35 788888764321111111110 0 1122333  223445567789999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccce----eccCCCCCCccccCCCCCChhhhhccCc
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA----IVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~----~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      ++|....  ......+.+..|.....++++++++++.+++|.+.|--+    +... .   ........ .      +..
T Consensus        76 taG~~~~--~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~-~---~~~~~sg~-p------~~r  142 (312)
T PRK05086         76 SAGVARK--PGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAA-E---VLKKAGVY-D------KNK  142 (312)
T ss_pred             cCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHH-H---HHHHhcCC-C------HHH
Confidence            9997543  223467889999999999999999999999988887422    0000 0   00000000 0      011


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~  199 (331)
                      ..|.+-+..-++....++..+++..-++ +.|+|.+.
T Consensus       143 vig~~~Lds~R~~~~ia~~l~~~~~~v~-~~v~GeHg  178 (312)
T PRK05086        143 LFGVTTLDVIRSETFVAELKGKQPGEVE-VPVIGGHS  178 (312)
T ss_pred             EEeeecHHHHHHHHHHHHHhCCChhheE-EEEEEecC
Confidence            3444434445555556667788877777 78899873

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.62  E-value=5.7e-06  Score=66.32  Aligned_cols=210  Identities=13%  Similarity=0.084  Sum_probs=129.2

Q ss_pred             cCCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .+.|++||+|-.  .-|+..+++.|.++|. ++..+..++.-.....++.+..+ ..-+++||+++.+++.++++     
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GA-eL~fTy~~e~l~krv~~la~~~~-s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGA-ELAFTYQGERLEKRVEELAEELG-SDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHHHhhcc-CCeEEecCCCCHHHHHHHHHHHHHh
Confidence            347899999964  5799999999999999 88777766655555555555433 34578899999988887774     


Q ss_pred             --CccEEEEcccCCCCC--------CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 --GCKGVFHVASPCTLE--------DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 --~~d~vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                        +.|.+||+.+....+        ...+.....+++...+...+.++++..  +-.-+|-+|    |++....      
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt----Ylgs~r~------  151 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT----YLGSERV------  151 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE----eccceee------
Confidence              479999999876532        122223444555555555666666544  112233222    1211110      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                           -|.|     |.-|..|...|--++..+.+.   |+++..+-.|.+-.--.. +...+..++......-|      
T Consensus       152 -----vPnY-----NvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAas-gI~~f~~~l~~~e~~aP------  214 (259)
T COG0623         152 -----VPNY-----NVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAAS-GIGDFRKMLKENEANAP------  214 (259)
T ss_pred             -----cCCC-----chhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhh-ccccHHHHHHHHHhhCC------
Confidence                 1223     578999999999999888665   577777766554332211 12222233333222222      


Q ss_pred             CCCceeHHHHHHHHHHhhcCC
Q 020110          225 WLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      .+.-+..+||...-+.++...
T Consensus       215 l~r~vt~eeVG~tA~fLlSdL  235 (259)
T COG0623         215 LRRNVTIEEVGNTAAFLLSDL  235 (259)
T ss_pred             ccCCCCHHHhhhhHHHHhcch
Confidence            234466899988888777654

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.59  E-value=1.6e-06  Score=76.04  Aligned_cols=83  Identities=12%  Similarity=0.108  Sum_probs=59.6

Q ss_pred             CCCeEEEeCcchHHHHH--HHHHHHHCCCCEEEEEecCCCccc------------hhhcCCCCCCCcEEEEEccCCCchH
Q 020110            8 EEETVCVTGANGFIGTW--LVKTLLDNNYTSINATVFPGSDSS------------HLFALPGAGDANLRVFEADVLDSGA   73 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~--l~~~L~~~g~~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~Dl~~~~~   73 (331)
                      ..|++||||+++-+|.+  +++.| +.|. +|+++++......            ...+.....+..+..+.+|++++++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            35799999999999999  89999 9999 8888875321111            1111111112256788999999988


Q ss_pred             HHHHhc-------CccEEEEcccCCC
Q 020110           74 VSRAVE-------GCKGVFHVASPCT   92 (331)
Q Consensus        74 ~~~~~~-------~~d~vih~a~~~~   92 (331)
                      +.++++       ++|++||++|...
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCC
Confidence            776664       4799999999763

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.55  E-value=3.6e-07  Score=82.44  Aligned_cols=97  Identities=23%  Similarity=0.263  Sum_probs=69.8

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCC-EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcccC
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASP   90 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~~   90 (331)
                      |+|.|| |++|+.+++.|.+.+.. +|++.+|+......+....  ...+++.++.|+.|.+++.++++++|+||||++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence            799999 99999999999998742 7899999877655544321  1118999999999999999999999999999986


Q ss_pred             CCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           91 CTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        91 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      ..                  ...++++|.+.|+ ++|-+|
T Consensus        78 ~~------------------~~~v~~~~i~~g~-~yvD~~   98 (386)
T PF03435_consen   78 FF------------------GEPVARACIEAGV-HYVDTS   98 (386)
T ss_dssp             GG------------------HHHHHHHHHHHT--EEEESS
T ss_pred             ch------------------hHHHHHHHHHhCC-Ceeccc
Confidence            31                  2257788888775 466533

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd00704 MDH Malate dehydrogenase

Probab=98.46  E-value=3e-06  Score=73.82  Aligned_cols=165  Identities=16%  Similarity=0.093  Sum_probs=101.8

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-C-----EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc-----------hH
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNY-T-----SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-----------GA   73 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~-~-----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----------~~   73 (331)
                      ||.|+||+|.+|+.++..|...+. .     +++.++++... +           ..+....|+.|.           ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-~-----------~~~g~~~Dl~d~~~~~~~~~~i~~~   69 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-K-----------ALEGVVMELQDCAFPLLKGVVITTD   69 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-C-----------ccceeeeehhhhcccccCCcEEecC
Confidence            799999999999999999988662 2     48888776521 1           111223333332           34


Q ss_pred             HHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceeccCCCCCCccccCCCC-
Q 020110           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSW-  151 (331)
Q Consensus        74 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~-  151 (331)
                      ..+.++++|+|||+||....  ......+.+..|+...+.+.....++ +.+-++.+-|--+     +.-....-+... 
T Consensus        70 ~~~~~~~aDiVVitAG~~~~--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv-----D~~t~~~~k~sg~  142 (323)
T cd00704          70 PEEAFKDVDVAILVGAFPRK--PGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPA-----NTNALIALKNAPN  142 (323)
T ss_pred             hHHHhCCCCEEEEeCCCCCC--cCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcH-----HHHHHHHHHHcCC
Confidence            55778999999999997543  23456889999999999999999888 3554444333101     000000111111 


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~  200 (331)
                      ..+.      ..-+.+.+..-++-...++..+++...++-..|+|.+..
T Consensus       143 ~p~~------~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  185 (323)
T cd00704         143 LPPK------NFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN  185 (323)
T ss_pred             CCHH------HEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEecccC
Confidence            0111      134556666666666667677777666655667887643

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.44  E-value=4.3e-07  Score=73.64  Aligned_cols=80  Identities=18%  Similarity=0.103  Sum_probs=60.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.++++|+||+|.+|+.+++.|.+.|+ +|+++.|+......+.+...... +.....+|..+.+++.+.+.++|+||++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~diVi~a  104 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIKGADVVFAA  104 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence            457999999999999999999999999 99999987644333222111000 3445667888888888999999999987


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      .+
T Consensus       105 t~  106 (194)
T cd01078         105 GA  106 (194)
T ss_pred             CC
Confidence            64

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.38  E-value=5.8e-06  Score=72.11  Aligned_cols=165  Identities=17%  Similarity=0.116  Sum_probs=99.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCC------EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch-----------H
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYT------SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG-----------A   73 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----------~   73 (331)
                      +|.|+|++|.+|++++..|...+.-      +++.+++++...            ..+....|+.|..           .
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            5899999999999999999886531      488887754321            0112233333332           3


Q ss_pred             HHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccce-eccCCCCCCccccCCCC
Q 020110           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISA-IVPNPGWKGKVFDETSW  151 (331)
Q Consensus        74 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~-~~~~~~~~~~~~~E~~~  151 (331)
                      ..+.++++|+|||+||....  ...+..+.++.|+...+.+.+...++. .+-+|.+-|--+ +..      ....+...
T Consensus        69 ~~~~~~~aDiVVitAG~~~~--~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t------~v~~~~sg  140 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPRK--EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNA------LVLSNYAP  140 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHH------HHHHHHcC
Confidence            45678899999999997543  233468889999999999999998883 544444333101 000      00000000


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~  200 (331)
                      ..|     +...=.-+.+..-++-...++..+++...++-..|+|.+..
T Consensus       141 ~~~-----~~vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  184 (324)
T TIGR01758       141 SIP-----PKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSS  184 (324)
T ss_pred             CCC-----cceEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCC
Confidence            000     00112223344445555556677888887777788887643

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.35  E-value=6.4e-07  Score=77.83  Aligned_cols=74  Identities=23%  Similarity=0.181  Sum_probs=52.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .+.++|+||||+|+||+.++++|.+. |..+++.+.|+......+..         ++..+++.   .+.+.+.++|+||
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~---------el~~~~i~---~l~~~l~~aDiVv  220 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA---------ELGGGKIL---SLEEALPEADIVV  220 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH---------HhccccHH---hHHHHHccCCEEE
Confidence            34679999999999999999999864 53388888886543333222         11124443   3567888999999


Q ss_pred             EcccCCC
Q 020110           86 HVASPCT   92 (331)
Q Consensus        86 h~a~~~~   92 (331)
                      |+++...
T Consensus       221 ~~ts~~~  227 (340)
T PRK14982        221 WVASMPK  227 (340)
T ss_pred             ECCcCCc
Confidence            9998643

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.19  E-value=2.7e-06  Score=72.39  Aligned_cols=81  Identities=15%  Similarity=0.292  Sum_probs=63.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHH----CCCCEEEEEecCCCccchhhcCCC-C----CCCcEEEEEccCCCchHHHHHhcCc
Q 020110           11 TVCVTGANGFIGTWLVKTLLD----NNYTSINATVFPGSDSSHLFALPG-A----GDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~----~g~~~V~~~~r~~~~~~~~~~~~~-~----~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      -++|.||+||.|..+++++.+    .|. ..-+..|+..+.....+... .    .. +...+.+|..|++++.+.++++
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~-slavAGRn~~KL~~vL~~~~~k~~~~ls-~~~i~i~D~~n~~Sl~emak~~   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGL-SLAVAGRNEKKLQEVLEKVGEKTGTDLS-SSVILIADSANEASLDEMAKQA   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCc-eEEEecCCHHHHHHHHHHHhhccCCCcc-cceEEEecCCCHHHHHHHHhhh
Confidence            489999999999999999999    567 77778888766544433221 1    12 2337889999999999999999


Q ss_pred             cEEEEcccCCCC
Q 020110           82 KGVFHVASPCTL   93 (331)
Q Consensus        82 d~vih~a~~~~~   93 (331)
                      .+|+||+|+.-.
T Consensus        85 ~vivN~vGPyR~   96 (423)
T KOG2733|consen   85 RVIVNCVGPYRF   96 (423)
T ss_pred             EEEEecccccee
Confidence            999999997643

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.16  E-value=7e-06  Score=73.47  Aligned_cols=73  Identities=18%  Similarity=0.152  Sum_probs=56.5

Q ss_pred             CCCeEEEeCc----------------chHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc
Q 020110            8 EEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS   71 (331)
Q Consensus         8 ~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   71 (331)
                      +.|+||||||                +|.+|.+++++|.+.|+ +|++++++... .    .+.    +  +...|+++.
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga-~V~~v~~~~~~-~----~~~----~--~~~~dv~~~  254 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGA-DVTLVSGPVNL-P----TPA----G--VKRIDVESA  254 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCC-EEEEeCCCccc-c----CCC----C--cEEEccCCH
Confidence            4679999999                99999999999999999 99999876521 1    110    2  245788888


Q ss_pred             hHHHHHh----cCccEEEEcccCCC
Q 020110           72 GAVSRAV----EGCKGVFHVASPCT   92 (331)
Q Consensus        72 ~~~~~~~----~~~d~vih~a~~~~   92 (331)
                      +++.+.+    .++|++||+||...
T Consensus       255 ~~~~~~v~~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        255 QEMLDAVLAALPQADIFIMAAAVAD  279 (399)
T ss_pred             HHHHHHHHHhcCCCCEEEEcccccc
Confidence            7777665    35899999999754

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.09  E-value=2.3e-05  Score=59.75  Aligned_cols=112  Identities=15%  Similarity=0.168  Sum_probs=75.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchh-hcCC---CCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL-FALP---GAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~-~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      |||.|+|++|.+|++++..|...+. .++..++++....... .++.   ............|.       +.++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~-------~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDY-------EALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSG-------GGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccc-------cccccccEE
Confidence            4899999999999999999999873 4899998874322111 1110   00000222322222       356789999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      |-+|+....  ......+.++.|....+.+.+...+.+.+.++.+-
T Consensus        74 vitag~~~~--~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivv  117 (141)
T PF00056_consen   74 VITAGVPRK--PGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVV  117 (141)
T ss_dssp             EETTSTSSS--TTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-
T ss_pred             EEecccccc--ccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEe
Confidence            999987543  23446888999999999999999888755444433

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.07  E-value=3.5e-05  Score=63.71  Aligned_cols=72  Identities=17%  Similarity=0.275  Sum_probs=60.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc--CCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA--LPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih   86 (331)
                      |+++|.|+ |-+|+++++.|.+.|+ +|+++.+++........  .      ....+.+|-++++.++++ ++++|+++-
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~------~~~~v~gd~t~~~~L~~agi~~aD~vva   72 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADEL------DTHVVIGDATDEDVLEEAGIDDADAVVA   72 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhc------ceEEEEecCCCHHHHHhcCCCcCCEEEE
Confidence            47889997 9999999999999999 99999988766554222  2      788999999999999988 688999996


Q ss_pred             ccc
Q 020110           87 VAS   89 (331)
Q Consensus        87 ~a~   89 (331)
                      +.+
T Consensus        73 ~t~   75 (225)
T COG0569          73 ATG   75 (225)
T ss_pred             eeC
Confidence            543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.02  E-value=1.4e-05  Score=66.19  Aligned_cols=64  Identities=9%  Similarity=0.112  Sum_probs=44.9

Q ss_pred             CcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh-------cCccEEEEcc
Q 020110           16 GANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-------EGCKGVFHVA   88 (331)
Q Consensus        16 GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~d~vih~a   88 (331)
                      .++|.||.+++++|.++|+ +|+++.+...    +...        ....+|+.+.+++.+++       .++|++||+|
T Consensus        22 ~SSGgIG~AIA~~la~~Ga-~Vvlv~~~~~----l~~~--------~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnA   88 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAGH-EVTLVTTKRA----LKPE--------PHPNLSIREIETTKDLLITLKELVQEHDILIHSM   88 (227)
T ss_pred             CcccHHHHHHHHHHHHCCC-EEEEEcChhh----cccc--------cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4589999999999999999 9998865321    1110        01346887776665443       3589999999


Q ss_pred             cCCC
Q 020110           89 SPCT   92 (331)
Q Consensus        89 ~~~~   92 (331)
                      |...
T Consensus        89 gv~d   92 (227)
T TIGR02114        89 AVSD   92 (227)
T ss_pred             Eecc
Confidence            9644

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.99  E-value=3.3e-05  Score=68.82  Aligned_cols=100  Identities=17%  Similarity=0.216  Sum_probs=63.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHH-HhcCccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSR-AVEGCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~vi   85 (331)
                      .+++|.|.||||++|+.|++.|.+. ++ +|+.+.++...-..+...      ......+|+.+.+++.. .++++|+||
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~-el~~l~s~~saG~~i~~~------~~~l~~~~~~~~~~~~~~~~~~~DvVf  109 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDF-EITVMTADRKAGQSFGSV------FPHLITQDLPNLVAVKDADFSDVDAVF  109 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCC-eEEEEEChhhcCCCchhh------CccccCccccceecCCHHHhcCCCEEE
Confidence            4569999999999999999999988 46 899888754432222211      11122244443333332 257899999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccce
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~  134 (331)
                      -+.+.                  .....++..+ +.+ .++|-+||.+.
T Consensus       110 ~Alp~------------------~~s~~i~~~~-~~g-~~VIDlSs~fR  138 (381)
T PLN02968        110 CCLPH------------------GTTQEIIKAL-PKD-LKIVDLSADFR  138 (381)
T ss_pred             EcCCH------------------HHHHHHHHHH-hCC-CEEEEcCchhc
Confidence            76532                  1344566665 345 57999998754

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.98  E-value=1.8e-05  Score=68.19  Aligned_cols=81  Identities=11%  Similarity=0.030  Sum_probs=59.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC---ccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~---~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      +.++++|+|| |.+|++++..|.+.|..+|+++.|+..   ....+. ++..... .+.....|+.+.+++.+.++.+|+
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP-ECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC-CceeEEechhhhhHHHhhhccCCE
Confidence            3578999999 899999999999999845999999762   222222 1211111 345567888888888888888999


Q ss_pred             EEEcccC
Q 020110           84 VFHVASP   90 (331)
Q Consensus        84 vih~a~~   90 (331)
                      |||+...
T Consensus       203 lINaTp~  209 (289)
T PRK12548        203 LVNATLV  209 (289)
T ss_pred             EEEeCCC
Confidence            9998754

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=97.97  E-value=6.9e-06  Score=52.60  Aligned_cols=54  Identities=13%  Similarity=0.020  Sum_probs=30.4

Q ss_pred             HHhCCCCCCCCCCC-CCCCCccccccchHHH-HhhCCCc-cCHHHHHHHHHHHHHHcC
Q 020110          268 SKLFPEFPVHRFDG-ETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       268 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~~~~~  322 (331)
                      .+++ +.+++.... ..+++......|++|+ +.|||+| ++|+++|+++.+|++++.
T Consensus         3 e~vt-G~~i~~~~~~rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np   59 (62)
T PF13950_consen    3 EKVT-GKKIPVEYAPRRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNP   59 (62)
T ss_dssp             HHHH-TS---EEEE---TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHST
T ss_pred             HHHH-CCCCCceECCCCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCc
Confidence            3444 444443332 2336777889999999 8999999 699999999999998874

...

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.94  E-value=6.8e-05  Score=66.01  Aligned_cols=95  Identities=19%  Similarity=0.174  Sum_probs=59.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCC--EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |++|+|.||||++|+.|++.|.+.+|.  ++.++.++......+. +.     +......|+.+.     .++++|+||-
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~-~~-----g~~i~v~d~~~~-----~~~~vDvVf~   69 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS-FK-----GKELKVEDLTTF-----DFSGVDIALF   69 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee-eC-----CceeEEeeCCHH-----HHcCCCEEEE
Confidence            469999999999999999999997762  4577776544332221 11     233444555431     2368999997


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccc
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~  133 (331)
                      +++..                  .+..++..+.+.|+ ++|=.||..
T Consensus        70 A~g~g------------------~s~~~~~~~~~~G~-~VIDlS~~~   97 (334)
T PRK14874         70 SAGGS------------------VSKKYAPKAAAAGA-VVIDNSSAF   97 (334)
T ss_pred             CCChH------------------HHHHHHHHHHhCCC-EEEECCchh
Confidence            76531                  13345555555665 566667653

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.91  E-value=1.8e-05  Score=66.88  Aligned_cols=77  Identities=14%  Similarity=0.119  Sum_probs=60.4

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcccC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASP   90 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~~   90 (331)
                      .++|-|||||.|.-++++|.+.|. .-....|+..+...+....     +.++-..++-++..+++.+++.++|+||+|+
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~-~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~p~~~~~~~~~~~VVlncvGP   81 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGL-TAALAGRSSAKLDALRASL-----GPEAAVFPLGVPAALEAMASRTQVVLNCVGP   81 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCC-chhhccCCHHHHHHHHHhc-----CccccccCCCCHHHHHHHHhcceEEEecccc
Confidence            689999999999999999999998 6666678877665544332     2333345555588999999999999999998


Q ss_pred             CCC
Q 020110           91 CTL   93 (331)
Q Consensus        91 ~~~   93 (331)
                      ...
T Consensus        82 yt~   84 (382)
T COG3268          82 YTR   84 (382)
T ss_pred             ccc
Confidence            764

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.89  E-value=0.00012  Score=63.67  Aligned_cols=113  Identities=18%  Similarity=0.162  Sum_probs=72.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhc----CCCC---CCCcEEEEEccCCCchHHHHHhcCc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA----LPGA---GDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~----~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      |+|.|+|+||.+|.+++..|+..|+ .+|++++|+.. ...+..    +...   .+...     .+.-..+. +.+.++
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~-~~~l~~~~~dl~d~~~~~~~~~-----~i~~~~d~-~~l~~a   73 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKS-LEKLKGLRLDIYDALAAAGIDA-----EIKISSDL-SDVAGS   73 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECccc-ccccccccchhhhchhccCCCc-----EEEECCCH-HHhCCC
Confidence            4899999999999999999999986 25999988431 111111    1000   00011     11111123 348899


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCc
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSS  131 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS  131 (331)
                      |+||-+++....  ...+..+.++.|+.....+++...+...+ .+|.+++
T Consensus        74 DiViitag~p~~--~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          74 DIVIITAGVPRK--EGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             CEEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            999999986442  12234677899999999999988777444 4556565

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.80  E-value=0.00026  Score=61.26  Aligned_cols=174  Identities=18%  Similarity=0.117  Sum_probs=102.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |||.|+|++|.+|++++..|...+. .++..++.+ ........+..... .......  ...+++.+.++++|+||-+|
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g~alDL~~~~~-~~~i~~~--~~~~~~y~~~~daDivvita   76 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPGVAADLSHINT-PAKVTGY--LGPEELKKALKGADVVVIPA   76 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccceeehHhHhCCC-cceEEEe--cCCCchHHhcCCCCEEEEeC
Confidence            4899999999999999999988873 378888776 22222212211100 1111111  01123456789999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccce-eccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA-IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~-~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |....  ......+.++.|......+.+...+++.+-+|.+-|--+ +..  ..-.....+.....+      ....|.+
T Consensus        77 G~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~--~i~t~~~~~~s~~p~------~rviG~~  146 (310)
T cd01337          77 GVPRK--PGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTV--PIAAEVLKKAGVYDP------KRLFGVT  146 (310)
T ss_pred             CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHH--HHHHHHHHHhcCCCH------HHEEeee
Confidence            97532  234468899999999999999998887655444333111 000  000000000110011      1134444


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~  198 (331)
                      -+..-++....++..+++..-++ +.|+|.+
T Consensus       147 ~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH  176 (310)
T cd01337         147 TLDVVRANTFVAELLGLDPAKVN-VPVIGGH  176 (310)
T ss_pred             chHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence            45555666666777788777777 7899987

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK04148 hypothetical protein; Provisional

Probab=97.79  E-value=0.00017  Score=53.70  Aligned_cols=95  Identities=18%  Similarity=0.291  Sum_probs=71.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      .++|++.|. | .|.+++..|.+.|+ +|++++.++.......+.      .+.++..|+.+++-  +.-+++|.|+-+=
T Consensus        17 ~~kileIG~-G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~~--~~y~~a~liysir   85 (134)
T PRK04148         17 NKKIVELGI-G-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKL------GLNAFVDDLFNPNL--EIYKNAKLIYSIR   85 (134)
T ss_pred             CCEEEEEEe-c-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHh------CCeEEECcCCCCCH--HHHhcCCEEEEeC
Confidence            368999996 6 88999999999999 999999988766555544      67899999998763  3456789888542


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                                ++.+.       ...+++.|++.++.-+|..=|
T Consensus        86 ----------pp~el-------~~~~~~la~~~~~~~~i~~l~  111 (134)
T PRK04148         86 ----------PPRDL-------QPFILELAKKINVPLIIKPLS  111 (134)
T ss_pred             ----------CCHHH-------HHHHHHHHHHcCCCEEEEcCC
Confidence                      13332       337899999999887765443

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.78  E-value=0.00027  Score=61.61  Aligned_cols=115  Identities=11%  Similarity=0.178  Sum_probs=76.7

Q ss_pred             cccCCCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch-hhcCCCC---CCCcEEEEEccCCCchHHHHHhc
Q 020110            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPGA---GDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus         5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~-~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      .++..+||.|+|+ |.+|+.++..|+..|. .++..++++...... ...+...   .. ++.....      .. +.++
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~-~~~i~~~------~~-~~~~   72 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTS-PTKIYAG------DY-SDCK   72 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccC-CeEEEeC------CH-HHhC
Confidence            3344569999998 9999999999998884 378888886554222 1111110   01 2222211      12 3478


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      ++|+||-.|+....  ...+..+.++.|....+.+++.+++.+.+-++.+-
T Consensus        73 ~adivIitag~~~k--~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivv  121 (315)
T PRK00066         73 DADLVVITAGAPQK--PGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVA  121 (315)
T ss_pred             CCCEEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence            99999999987432  23346788999999999999999888655444433

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.76  E-value=9.8e-05  Score=65.96  Aligned_cols=103  Identities=13%  Similarity=0.149  Sum_probs=67.5

Q ss_pred             CCCeEEEeCc----------------chHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc
Q 020110            8 EEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS   71 (331)
Q Consensus         8 ~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   71 (331)
                      +.++||||||                ||.+|..+++.|...|+ +|+.+.+.....     .+.    .+  ...|+.+.
T Consensus       184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga-~V~~~~g~~~~~-----~~~----~~--~~~~v~~~  251 (390)
T TIGR00521       184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGA-DVTLITGPVSLL-----TPP----GV--KSIKVSTA  251 (390)
T ss_pred             CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCC-EEEEeCCCCccC-----CCC----Cc--EEEEeccH
Confidence            4589999998                47899999999999999 999887654321     100    22  45788888


Q ss_pred             hHH-HHHh----cCccEEEEcccCCCCCCCC--Cc----hhhhhHHHHHHHHHHHHHHHhCC
Q 020110           72 GAV-SRAV----EGCKGVFHVASPCTLEDPV--DP----EKELILPAVQGTLNVLEAAKRFG  122 (331)
Q Consensus        72 ~~~-~~~~----~~~d~vih~a~~~~~~~~~--~~----~~~~~~~n~~~~~~l~~~~~~~~  122 (331)
                      +++ ++++    .++|++|++||........  ..    ....+..|..-+-.+++..++..
T Consensus       252 ~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       252 EEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             HHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence            777 4444    3589999999976432111  00    01123355556666777666543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.76  E-value=0.00013  Score=72.45  Aligned_cols=78  Identities=17%  Similarity=0.133  Sum_probs=59.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CC------------EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHH
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN-YT------------SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAV   74 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~------------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   74 (331)
                      .|++|+|.|+ |++|+..++.|.+.. ..            .|++.+++......+.+...    +++.+..|+.|.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~----~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE----NAEAVQLDVSDSESL  642 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC----CCceEEeecCCHHHH
Confidence            4789999997 999999999998753 31            26767666544444333211    567899999999999


Q ss_pred             HHHhcCccEEEEcccC
Q 020110           75 SRAVEGCKGVFHVASP   90 (331)
Q Consensus        75 ~~~~~~~d~vih~a~~   90 (331)
                      .++++++|+||.+...
T Consensus       643 ~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        643 LKYVSQVDVVISLLPA  658 (1042)
T ss_pred             HHhhcCCCEEEECCCc
Confidence            9999999999998764

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.75  E-value=0.00021  Score=63.22  Aligned_cols=101  Identities=20%  Similarity=0.204  Sum_probs=60.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEE-EccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |++|+|+||||++|+.+++.|.+. ++ +++++.++......+.+...    .+..+ ..++.+.+..  ...++|+|+-
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~-elv~v~~~~~~g~~l~~~~~----~~~~~~~~~~~~~~~~--~~~~vD~Vf~   74 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEV-EIVAVTSRSSAGKPLSDVHP----HLRGLVDLVLEPLDPE--ILAGADVVFL   74 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEECccccCcchHHhCc----ccccccCceeecCCHH--HhcCCCEEEE
Confidence            579999999999999999999886 56 77776654332222221111    11111 1233333332  4467999987


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcccee
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAI  135 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~  135 (331)
                      +....                  ....++..+.+.| +++|=.|+.+..
T Consensus        75 alP~~------------------~~~~~v~~a~~aG-~~VID~S~~fR~  104 (343)
T PRK00436         75 ALPHG------------------VSMDLAPQLLEAG-VKVIDLSADFRL  104 (343)
T ss_pred             CCCcH------------------HHHHHHHHHHhCC-CEEEECCcccCC
Confidence            65321                  1235556665566 468888876543

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.75  E-value=0.0038  Score=47.55  Aligned_cols=185  Identities=16%  Similarity=0.190  Sum_probs=99.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch---HH----HHHh--cC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AV----SRAV--EG   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~----~~~~--~~   80 (331)
                      .+|+|-||-|-+|+.+++.+..+++ -|..++....+...          --..+.+|-+-.+   ++    .+.+  ++
T Consensus         4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~Ad----------~sI~V~~~~swtEQe~~v~~~vg~sL~gek   72 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQAD----------SSILVDGNKSWTEQEQSVLEQVGSSLQGEK   72 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccccc----------ceEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence            4899999999999999999999999 77766543322111          1123334433222   22    2223  24


Q ss_pred             ccEEEEcccCCCCCCCC-C----chhhhhHHHHHHHHHHHH-HHHhC-CCCEEEEeCccc-eeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLEDPV-D----PEKELILPAVQGTLNVLE-AAKRF-GVRRVVVTSSIS-AIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~-~----~~~~~~~~n~~~~~~l~~-~~~~~-~~~~~v~~SS~~-~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|+..||-+...... .    +-+.+++-.+- +..+.. .+..+ +..-++-+..+. +..+.++.           
T Consensus        73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvw-tSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgM-----------  140 (236)
T KOG4022|consen   73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVW-TSAISAKLATTHLKPGGLLQLTGAKAALGGTPGM-----------  140 (236)
T ss_pred             cceEEEeeccccCCCcchhhhhhchhhHHHHHHH-HHHHHHHHHHhccCCCceeeecccccccCCCCcc-----------
Confidence            89999999876653222 1    11222332222 112222 22222 333354444322 22222221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHH-HHcCCe----EEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc-CCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFA-EKHGVD----VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY-HWL  226 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~-~~~~~~----~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  226 (331)
                               -.||+.|....++.+.++ +..|++    .+.+-|-..-.|..+..                  .++ ..-
T Consensus       141 ---------IGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKw------------------MP~ADfs  193 (236)
T KOG4022|consen  141 ---------IGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKW------------------MPNADFS  193 (236)
T ss_pred             ---------cchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccccc------------------CCCCccc
Confidence                     169999999999999876 445654    22233322333332211                  122 245


Q ss_pred             CceeHHHHHHHHHHhhcC
Q 020110          227 GAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~  244 (331)
                      +|.+..-+++-++.....
T Consensus       194 sWTPL~fi~e~flkWtt~  211 (236)
T KOG4022|consen  194 SWTPLSFISEHFLKWTTE  211 (236)
T ss_pred             CcccHHHHHHHHHHHhcc
Confidence            688888888888776654

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.75  E-value=0.00013  Score=58.08  Aligned_cols=74  Identities=16%  Similarity=0.214  Sum_probs=45.3

Q ss_pred             CCeEEEeCc----------------chHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc-
Q 020110            9 EETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-   71 (331)
Q Consensus         9 ~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-   71 (331)
                      .|+||||+|                ||-.|..|++.+...|+ +|+.+.....-. .    +.    +++.+...-... 
T Consensus         3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga-~V~li~g~~~~~-~----p~----~~~~i~v~sa~em   72 (185)
T PF04127_consen    3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGA-EVTLIHGPSSLP-P----PP----GVKVIRVESAEEM   72 (185)
T ss_dssp             T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT--EEEEEE-TTS---------T----TEEEEE-SSHHHH
T ss_pred             CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCC-EEEEEecCcccc-c----cc----cceEEEecchhhh
Confidence            568888864                79999999999999999 999987653211 1    11    666665443221 


Q ss_pred             -hHHHHHhcCccEEEEcccCCC
Q 020110           72 -GAVSRAVEGCKGVFHVASPCT   92 (331)
Q Consensus        72 -~~~~~~~~~~d~vih~a~~~~   92 (331)
                       +.+.+.+.+.|++||+||+..
T Consensus        73 ~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   73 LEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             HHHHHHHGGGGSEEEE-SB--S
T ss_pred             hhhhccccCcceeEEEecchhh
Confidence             334455567899999999754

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.73  E-value=0.00041  Score=60.53  Aligned_cols=173  Identities=16%  Similarity=0.150  Sum_probs=103.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-C-----EEEEEecCCCc---cchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-T-----SINATVFPGSD---SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~-----~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (331)
                      .||.|+|++|++|++++..|+..+. .     ++..++++...   ......+....   . ....+..-.....+.+++
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~---~-~~~~~~~i~~~~~~~~~d   79 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCA---F-PLLAGVVATTDPEEAFKD   79 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcc---c-cccCCcEEecChHHHhCC
Confidence            4899999999999999999998873 4     68888774321   11111111100   0 000011001123356789


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCC-CEEEEeCccceeccCCCC-CCccccCCC-CCChhhh
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGW-KGKVFDETS-WTDLEYC  157 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~SS~~~~~~~~~~-~~~~~~E~~-~~~~~~~  157 (331)
                      +|+||..||....  ...+..+.+..|+...+.+.+.+.++.. +-++.+-|-      |-. -.....+.. -..    
T Consensus        80 aDvVVitAG~~~k--~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN------PvDv~t~v~~k~s~g~p----  147 (323)
T TIGR01759        80 VDAALLVGAFPRK--PGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGN------PANTNALIASKNAPDIP----  147 (323)
T ss_pred             CCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC------cHHHHHHHHHHHcCCCC----
Confidence            9999999997432  2345688999999999999999988865 545444431      100 000011111 111    


Q ss_pred             hccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCC
Q 020110          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (331)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~  200 (331)
                        +....|.+.+..-++-...++..+++...++-..|+|.+..
T Consensus       148 --~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  188 (323)
T TIGR01759       148 --PKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN  188 (323)
T ss_pred             --HHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC
Confidence              11245556666666666667777888887777778887643

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.73  E-value=8.5e-05  Score=68.64  Aligned_cols=71  Identities=18%  Similarity=0.227  Sum_probs=59.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~   87 (331)
                      |+|+|+|+ |.+|+++++.|.+.|+ +|+++++++.....+.+ .      +++++.+|.++...+.++ ++++|+||-+
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~a~~vi~~   72 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRL------DVRTVVGNGSSPDVLREAGAEDADLLIAV   72 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhc------CEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence            48999998 9999999999999999 99999887765544433 2      688999999999888887 7889999865


Q ss_pred             c
Q 020110           88 A   88 (331)
Q Consensus        88 a   88 (331)
                      .
T Consensus        73 ~   73 (453)
T PRK09496         73 T   73 (453)
T ss_pred             c
Confidence            4

>PRK05442 malate dehydrogenase; Provisional

Probab=97.72  E-value=0.00074  Score=59.01  Aligned_cols=172  Identities=17%  Similarity=0.111  Sum_probs=101.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CC-----EEEEEecCCCc---cchhhcCCCCC---CCcEEEEEccCCCchHHH
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN-YT-----SINATVFPGSD---SSHLFALPGAG---DANLRVFEADVLDSGAVS   75 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~-----~V~~~~r~~~~---~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~   75 (331)
                      +++||.|+|++|.+|++++..|...+ ..     ++..+++++..   ......+....   ..++++     +  ....
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~--~~~y   75 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----T--DDPN   75 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----e--cChH
Confidence            35699999999999999999998866 33     68888764321   11111111100   001111     1  1223


Q ss_pred             HHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCE-EEEeCccceeccCCCCCCccccCCCCCC
Q 020110           76 RAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRR-VVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        76 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~-~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      +.++++|+||-+||....  ...+..+.++.|+.-.+.+.+...++. .+. +|.+|-. +     +.-.....+..+.-
T Consensus        76 ~~~~daDiVVitaG~~~k--~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNP-v-----Dv~t~v~~k~s~g~  147 (326)
T PRK05442         76 VAFKDADVALLVGARPRG--PGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNP-A-----NTNALIAMKNAPDL  147 (326)
T ss_pred             HHhCCCCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCc-h-----HHHHHHHHHHcCCC
Confidence            567899999999986432  234568889999999999999988853 343 4444421 1     00000000111000


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~  199 (331)
                      |     +....|.+-+..-++-...++..+++...++...|+|.+.
T Consensus       148 p-----~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG  188 (326)
T PRK05442        148 P-----AENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHS  188 (326)
T ss_pred             C-----HHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCc
Confidence            1     1124555666666666666777788877777666788764

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.70  E-value=0.00061  Score=50.56  Aligned_cols=98  Identities=17%  Similarity=0.180  Sum_probs=55.1

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEE-EecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      ||.|+||||++|+.|++.|.+.-.-+++. ..++.+.-..+................+ .+.+    .+.++|+||.|.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPE----ELSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGH----HHTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchh----HhhcCCEEEecCc
Confidence            68999999999999999999964225444 4444423333333221000011111122 2222    3478999998854


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      .                  .....+...+.+.|+ ++|=.|+.
T Consensus        76 ~------------------~~~~~~~~~~~~~g~-~ViD~s~~   99 (121)
T PF01118_consen   76 H------------------GASKELAPKLLKAGI-KVIDLSGD   99 (121)
T ss_dssp             H------------------HHHHHHHHHHHHTTS-EEEESSST
T ss_pred             h------------------hHHHHHHHHHhhCCc-EEEeCCHH
Confidence            2                  123456666677776 57766654

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.70  E-value=0.00094  Score=57.96  Aligned_cols=114  Identities=18%  Similarity=0.116  Sum_probs=75.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      ||.|+|++|.||++++..|...+. .++..+++++ .......+..... ........  +.+++.+.++++|+||-.||
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a~DL~~~~~-~~~i~~~~--~~~~~~~~~~daDivvitaG   76 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVAADLSHIPT-AASVKGFS--GEEGLENALKGADVVVIPAG   76 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEEchhhcCCc-CceEEEec--CCCchHHHcCCCCEEEEeCC
Confidence            589999999999999999988874 4788888766 2222222211110 11111101  11224567899999999999


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      ....  ......+.++.|..-.+.+.+...+++.+.+|.+-
T Consensus        77 ~~~~--~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivv  115 (312)
T TIGR01772        77 VPRK--PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVI  115 (312)
T ss_pred             CCCC--CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEe
Confidence            7533  23446788999999999999998888765554433

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.69  E-value=2e-05  Score=59.68  Aligned_cols=78  Identities=15%  Similarity=0.116  Sum_probs=55.4

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      +.+.++++|.|+ |..|+.++..|.+.|..+|+++.|+......+.+.....  +++++.  +   +++...+.++|+||
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~--~~~~~~--~---~~~~~~~~~~DivI   80 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGV--NIEAIP--L---EDLEEALQEADIVI   80 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGC--SEEEEE--G---GGHCHHHHTESEEE
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCcc--ccceee--H---HHHHHHHhhCCeEE
Confidence            446789999998 889999999999999867999999876655544322100  344433  2   33446788999999


Q ss_pred             EcccCC
Q 020110           86 HVASPC   91 (331)
Q Consensus        86 h~a~~~   91 (331)
                      ++.+..
T Consensus        81 ~aT~~~   86 (135)
T PF01488_consen   81 NATPSG   86 (135)
T ss_dssp             E-SSTT
T ss_pred             EecCCC
Confidence            987643

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.67  E-value=5.9e-05  Score=73.52  Aligned_cols=161  Identities=18%  Similarity=0.199  Sum_probs=103.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc----cchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC-----
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD----SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-----   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----   80 (331)
                      |.++|+||-|..|-.|++.|.+.|...++..+|+--.    .....++... +.++.+-.-|++..+....++++     
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~-GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR-GVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc-CeEEEEecccchhhhhHHHHHHHhhhcc
Confidence            6899999999999999999999998455555564221    1111122111 11344444666666656666653     


Q ss_pred             -ccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           81 -CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        81 -~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                       +-.|+|+|+.--.    +....+..+.-+....+|.||=+..++.  -.+.||.+||.+.--++.+.            
T Consensus      1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQ------------ 1915 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQ------------ 1915 (2376)
T ss_pred             cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcc------------
Confidence             5789999975432    1222333444455567788887777766  46789999997654444443            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPA  192 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~  192 (331)
                              ..||.+....|+++..-. ..|++.+.+--|
T Consensus      1916 --------tNYG~aNS~MERiceqRr-~~GfPG~AiQWG 1945 (2376)
T KOG1202|consen 1916 --------TNYGLANSAMERICEQRR-HEGFPGTAIQWG 1945 (2376)
T ss_pred             --------cccchhhHHHHHHHHHhh-hcCCCcceeeee
Confidence                    379999999999997643 567777766544

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.65  E-value=0.0018  Score=56.64  Aligned_cols=115  Identities=15%  Similarity=0.113  Sum_probs=74.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc--hhhcCC--CCCCCcEEEEE-ccCCCchHHHHHhcCcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALP--GAGDANLRVFE-ADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~--~~~~~~~~~~~-~Dl~~~~~~~~~~~~~d   82 (331)
                      +++||.|+|+ |.+|+.++..+...|+.+|+.+++++....  .++...  ...+...++.. .|      . +.++++|
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d------~-~~l~~aD   76 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNN------Y-EDIAGSD   76 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCC------H-HHhCCCC
Confidence            3469999995 999999999999888437888888765421  111100  00010222221 22      3 3578999


Q ss_pred             EEEEcccCCCCCCC---CCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeC
Q 020110           83 GVFHVASPCTLEDP---VDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (331)
Q Consensus        83 ~vih~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  130 (331)
                      +||.+++.......   ..+..+.+..|+.....+.+.+.+...+ .+|.+|
T Consensus        77 iVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s  128 (321)
T PTZ00082         77 VVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT  128 (321)
T ss_pred             EEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999986542111   0145667888999888999988888765 455555

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.61  E-value=0.00018  Score=52.93  Aligned_cols=69  Identities=20%  Similarity=0.249  Sum_probs=55.6

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEcc
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~a   88 (331)
                      |+|.|. |-+|..+++.|.+.+. +|+++++++.....+...      ++.++.||.++++.++++ +++++.||-+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~------~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGI-DVVVIDRDPERVEELREE------GVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHT------TSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhc------ccccccccchhhhHHhhcCccccCEEEEcc
Confidence            678887 7899999999999777 999999887766666554      688999999999988865 57789888654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.56  E-value=0.00054  Score=59.67  Aligned_cols=167  Identities=16%  Similarity=0.132  Sum_probs=97.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhcCC-CC---CCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALP-GA---GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~-~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      ++|.|+|+ |.+|+.++..|+..|. .+|++++|+........... ..   ..........   +   . +.+.++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~---~---~-~~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAG---D---Y-SDCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcC---C---H-HHhCCCCEE
Confidence            37999996 9999999999999993 28999998765533322110 00   0002222211   2   2 246899999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC-CCccccCCCCCChhhhhccCcc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKW  163 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~-~~~~~~E~~~~~~~~~~~~~~~  163 (331)
                      |.+++....  ...+..+.++.|......+.+.+++++.+.+|.+-|-      |-. -...........      +...
T Consensus        73 Iitag~~~~--~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN------P~d~~~~~~~~~~g~p------~~~v  138 (306)
T cd05291          73 VITAGAPQK--PGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN------PVDVITYVVQKLSGLP------KNRV  138 (306)
T ss_pred             EEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC------hHHHHHHHHHHHhCcC------HHHE
Confidence            999987543  2344678899999999999999988865554443331      100 000000000000      0112


Q ss_pred             hhH-HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC
Q 020110          164 YPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       164 y~~-sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~  199 (331)
                      .|. +-+..-++....++..+++..-++. .|+|.+.
T Consensus       139 ~g~gt~LDs~R~~~~la~~l~v~~~~v~~-~V~G~Hg  174 (306)
T cd05291         139 IGTGTSLDTARLRRALAEKLNVDPRSVHA-YVLGEHG  174 (306)
T ss_pred             eeccchHHHHHHHHHHHHHHCCCcccceE-EEEecCC
Confidence            333 2333444444555667787777775 7899864

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.56  E-value=0.0017  Score=57.16  Aligned_cols=105  Identities=12%  Similarity=0.158  Sum_probs=69.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC----------------------CC-CCCcEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP----------------------GA-GDANLRVF   64 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~----------------------~~-~~~~~~~~   64 (331)
                      +.++|+|+|+ |-+|+++++.|...|+.++++++++.-+..++.+..                      .. ...+++.+
T Consensus        23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~  101 (338)
T PRK12475         23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV  101 (338)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence            3468999997 779999999999999878888888653322222110                      00 11246666


Q ss_pred             EccCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        65 ~~Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      ..|++ .+.+.++++++|+||.+...         ..        ....+-++|.+.+++ +|+.+..
T Consensus       102 ~~~~~-~~~~~~~~~~~DlVid~~D~---------~~--------~r~~in~~~~~~~ip-~i~~~~~  150 (338)
T PRK12475        102 VTDVT-VEELEELVKEVDLIIDATDN---------FD--------TRLLINDLSQKYNIP-WIYGGCV  150 (338)
T ss_pred             eccCC-HHHHHHHhcCCCEEEEcCCC---------HH--------HHHHHHHHHHHcCCC-EEEEEec
Confidence            67775 45677888999999987421         11        122355677888864 7775543

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.55  E-value=0.0019  Score=56.94  Aligned_cols=105  Identities=18%  Similarity=0.234  Sum_probs=69.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC----------------------CCC-CCCcEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL----------------------PGA-GDANLRVF   64 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~----------------------~~~-~~~~~~~~   64 (331)
                      +.++|+|.|+ |.+|++++..|...|..++++++.+.-+..++.+.                      ... ...+++.+
T Consensus        23 ~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~  101 (339)
T PRK07688         23 REKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAI  101 (339)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            4568999998 99999999999999987899998864332222211                      000 11145566


Q ss_pred             EccCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        65 ~~Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      ..+++ .+.+.++++++|+||.+...         +        .....+.++|.+.++ .+|+.|+.
T Consensus       102 ~~~~~-~~~~~~~~~~~DlVid~~Dn---------~--------~~r~~ln~~~~~~~i-P~i~~~~~  150 (339)
T PRK07688        102 VQDVT-AEELEELVTGVDLIIDATDN---------F--------ETRFIVNDAAQKYGI-PWIYGACV  150 (339)
T ss_pred             eccCC-HHHHHHHHcCCCEEEEcCCC---------H--------HHHHHHHHHHHHhCC-CEEEEeee
Confidence            66664 45566778889999987421         1        123356778888885 48886654

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.54  E-value=0.0042  Score=57.28  Aligned_cols=168  Identities=20%  Similarity=0.166  Sum_probs=97.8

Q ss_pred             CCeEEEeCcc-hHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhhcCC---CCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            9 EETVCVTGAN-GFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALP---GAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         9 ~~~vlVtGat-G~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      .+-.|||||+ |-||..++..|++-|. .|++++.+-+..  ...+.++   ...+...-++..+.....++.++++   
T Consensus       396 d~valVTGA~~gSIaa~Vv~~LL~gGA-tVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg  474 (866)
T COG4982         396 DKVALVTGASKGSIAAAVVARLLAGGA-TVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG  474 (866)
T ss_pred             cceEEEecCCCcchHHHHHHHHHhCCc-EEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence            4678999975 8999999999999999 999887654332  1122221   1123245566677777766666653   


Q ss_pred             ------------------CccEEEEcccCCCCCCCC-Cchhhh--hHHHHHHHHHHHHHHHhCCCC-------EEEEeCc
Q 020110           80 ------------------GCKGVFHVASPCTLEDPV-DPEKEL--ILPAVQGTLNVLEAAKRFGVR-------RVVVTSS  131 (331)
Q Consensus        80 ------------------~~d~vih~a~~~~~~~~~-~~~~~~--~~~n~~~~~~l~~~~~~~~~~-------~~v~~SS  131 (331)
                                        ..|.+|-+|++...+... -.++.-  +++-.-....++-..+..+..       ++|.-.|
T Consensus       475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgS  554 (866)
T COG4982         475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGS  554 (866)
T ss_pred             cccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCC
Confidence                              137888888875543221 122222  233233344455444444321       2444343


Q ss_pred             cc-eeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHcC----CeEEEEcCCcccCCCC
Q 020110          132 IS-AIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG----VDVVAIHPATCLGPLM  199 (331)
Q Consensus       132 ~~-~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~----~~~~~lR~~~v~G~~~  199 (331)
                      .. ..++.                      ...|+.+|+..|.++..|..+.+    +.++-.++|++-|-+.
T Consensus       555 PNrG~FGg----------------------DGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGL  605 (866)
T COG4982         555 PNRGMFGG----------------------DGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGL  605 (866)
T ss_pred             CCCCccCC----------------------CcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccc
Confidence            21 11111                      02799999999999987765542    3344556777777654

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.54  E-value=0.00069  Score=62.54  Aligned_cols=73  Identities=21%  Similarity=0.091  Sum_probs=52.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cch-hhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSH-LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .|+|+|+|+++ +|..+++.|++.|+ +|++.+++... ... ..++...   +++++.+|..+     ....++|+||+
T Consensus         5 ~k~v~iiG~g~-~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~---~~~~~~~~~~~-----~~~~~~d~vv~   74 (450)
T PRK14106          5 GKKVLVVGAGV-SGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGEL---GIELVLGEYPE-----EFLEGVDLVVV   74 (450)
T ss_pred             CCEEEEECCCH-HHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhc---CCEEEeCCcch-----hHhhcCCEEEE
Confidence            47999999977 99999999999999 99999876422 111 1111111   56777888865     34567999999


Q ss_pred             cccCC
Q 020110           87 VASPC   91 (331)
Q Consensus        87 ~a~~~   91 (331)
                      +++..
T Consensus        75 ~~g~~   79 (450)
T PRK14106         75 SPGVP   79 (450)
T ss_pred             CCCCC
Confidence            98863

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.53  E-value=0.00054  Score=63.32  Aligned_cols=74  Identities=20%  Similarity=0.265  Sum_probs=58.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih   86 (331)
                      .+++|+|+|+ |.+|+.+++.|.+.|+ +|+++++++.....+.+...    ++.++.+|.++++.+.++ ++++|+||-
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~~~----~~~~i~gd~~~~~~L~~~~~~~a~~vi~  303 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEELP----NTLVLHGDGTDQELLEEEGIDEADAFIA  303 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHCC----CCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence            3579999998 9999999999999999 99999888765544443211    577899999999888644 567899885


Q ss_pred             c
Q 020110           87 V   87 (331)
Q Consensus        87 ~   87 (331)
                      +
T Consensus       304 ~  304 (453)
T PRK09496        304 L  304 (453)
T ss_pred             C
Confidence            4

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.53  E-value=0.0013  Score=56.53  Aligned_cols=169  Identities=17%  Similarity=0.098  Sum_probs=97.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCC-EEEEEecCCCccch-hhcCCCC---CCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSH-LFALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~-~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      +||.|+|+ |+||+.++-.|+.++.. ++..+++......- ...+...   ..... .+.+| .+    .+.++++|+|
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~-~i~~~-~~----y~~~~~aDiV   73 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDV-KITGD-GD----YEDLKGADIV   73 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCce-EEecC-CC----hhhhcCCCEE
Confidence            48999999 99999999999887754 88888887332211 1111110   00011 12222 11    3567899999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcch
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (331)
                      +-.||...-  ......+.++.|..-...+.+...+.+.+-++.+-|--+ --..    ...-+.... |.    ....-
T Consensus        74 vitAG~prK--pGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPv-D~~t----y~~~k~sg~-p~----~rvig  141 (313)
T COG0039          74 VITAGVPRK--PGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPV-DILT----YIAMKFSGF-PK----NRVIG  141 (313)
T ss_pred             EEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcH-HHHH----HHHHHhcCC-Cc----cceec
Confidence            999986443  223457889999999999999998887665655554210 0000    000011100 00    00123


Q ss_pred             hHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Q 020110          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (331)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~  198 (331)
                      +.+.+..-++-...++..+++...++. .|+|.+
T Consensus       142 ~gt~LDsaR~~~~lae~~~v~~~~V~~-~ViGeH  174 (313)
T COG0039         142 SGTVLDSARFRTFLAEKLGVSPKDVHA-YVIGEH  174 (313)
T ss_pred             ccchHHHHHHHHHHHHHhCCChhHcee-eEeccC
Confidence            445555556666666677777776663 466643

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.53  E-value=0.00023  Score=62.07  Aligned_cols=36  Identities=14%  Similarity=0.138  Sum_probs=32.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (331)
                      |++|.|+| +|.+|+.++..|++.|+ +|++.+|++..
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~-~V~v~d~~~~~   37 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGH-EVRLWDADPAA   37 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCC-eeEEEeCCHHH
Confidence            45899999 59999999999999999 99999987644

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.52  E-value=0.00049  Score=60.92  Aligned_cols=101  Identities=18%  Similarity=0.177  Sum_probs=58.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCCEEEEE-ecCCCccchhhcCCCCCCCcEEEE-EccCCCchHHHHHhcCccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINAT-VFPGSDSSHLFALPGAGDANLRVF-EADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ++|.|+||||++|..+++.|.+. ++ +++.+ +++.+....+.....    .+... ..++.+. +..++++++|+||-
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~-el~~l~~s~~sagk~~~~~~~----~l~~~~~~~~~~~-~~~~~~~~~DvVf~   74 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEV-EITYLVSSRESAGKPVSEVHP----HLRGLVDLNLEPI-DEEEIAEDADVVFL   74 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEeccchhcCCChHHhCc----cccccCCceeecC-CHHHhhcCCCEEEE
Confidence            48999999999999999999876 45 77744 443322222221111    11111 1112211 22344457999997


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcccee
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAI  135 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~  135 (331)
                      +.+..                  ....++..+.+.| .++|=.|+.+..
T Consensus        75 alP~~------------------~s~~~~~~~~~~G-~~VIDlS~~fR~  104 (346)
T TIGR01850        75 ALPHG------------------VSAELAPELLAAG-VKVIDLSADFRL  104 (346)
T ss_pred             CCCch------------------HHHHHHHHHHhCC-CEEEeCChhhhc
Confidence            76421                  2345666666667 578888886543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.50  E-value=0.00048  Score=60.43  Aligned_cols=96  Identities=18%  Similarity=0.217  Sum_probs=57.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCC--EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |++|.|+||||++|+.|++.|.+.+|.  ++..+....+.-..+. +.     +   ...++.+.+.. + ++++|+||-
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~-~~-----~---~~l~~~~~~~~-~-~~~vD~vFl   72 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP-FA-----G---KNLRVREVDSF-D-FSQVQLAFF   72 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec-cC-----C---cceEEeeCChH-H-hcCCCEEEE
Confidence            469999999999999999999977651  3444433322211111 10     1   12333333322 2 478999997


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccce
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~  134 (331)
                      +.+.          .        ....++..+.+.|+ ++|=.|+.+.
T Consensus        73 a~p~----------~--------~s~~~v~~~~~~G~-~VIDlS~~fR  101 (336)
T PRK05671         73 AAGA----------A--------VSRSFAEKARAAGC-SVIDLSGALP  101 (336)
T ss_pred             cCCH----------H--------HHHHHHHHHHHCCC-eEEECchhhc
Confidence            6541          0        12347777777776 5787787654

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.47  E-value=0.0013  Score=55.63  Aligned_cols=67  Identities=18%  Similarity=0.191  Sum_probs=44.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEE-ecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINAT-VFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |++|.|+|++|.+|+.+++.+.+. +. ++.+. ++++......             -..++...+++.++++++|+||+
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~-elvav~d~~~~~~~~~-------------~~~~i~~~~dl~~ll~~~DvVid   66 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDL-ELVAAVDRPGSPLVGQ-------------GALGVAITDDLEAVLADADVLID   66 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCCcccccc-------------CCCCccccCCHHHhccCCCEEEE
Confidence            359999999999999999988874 57 76664 4443322111             11233334456666778999998


Q ss_pred             ccc
Q 020110           87 VAS   89 (331)
Q Consensus        87 ~a~   89 (331)
                      ++.
T Consensus        67 ~t~   69 (257)
T PRK00048         67 FTT   69 (257)
T ss_pred             CCC
Confidence            873

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.46  E-value=0.0007  Score=59.68  Aligned_cols=91  Identities=19%  Similarity=0.229  Sum_probs=56.3

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEE---EEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSIN---ATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +|+|.||||++|+.|++.|.+.+| .+.   .+.+....-..+...      +......|+.    . ..+.++|+||-+
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~h-p~~~l~~~as~~~~g~~~~~~------~~~~~~~~~~----~-~~~~~~D~v~~a   68 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNF-PIDKLVLLASDRSAGRKVTFK------GKELEVNEAK----I-ESFEGIDIALFS   68 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCC-ChhhEEEEeccccCCCeeeeC------CeeEEEEeCC----h-HHhcCCCEEEEC
Confidence            589999999999999999998877 433   333543332222211      3345555663    1 234789999988


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      ++..                  .+..++..+.+.|+ ++|=.||.
T Consensus        69 ~g~~------------------~s~~~a~~~~~~G~-~VID~ss~   94 (339)
T TIGR01296        69 AGGS------------------VSKEFAPKAAKCGA-IVIDNTSA   94 (339)
T ss_pred             CCHH------------------HHHHHHHHHHHCCC-EEEECCHH
Confidence            7631                  13345555555675 46666654

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.40  E-value=0.0018  Score=56.63  Aligned_cols=114  Identities=14%  Similarity=0.138  Sum_probs=73.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh-hcCCCC---CCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGA---GDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      +.+||.|+|| |.+|+.++..|...|..+|..++++....... ..+...   .+...+. .    ...+++ .++++|+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i-~----~~~d~~-~l~~ADi   76 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINI-L----GTNNYE-DIKDSDV   76 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEE-E----eCCCHH-HhCCCCE
Confidence            3469999997 99999999999888833888898866432211 111000   0001111 1    112344 6789999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCE-EEEeC
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S  130 (331)
                      ||.+++....  ......+.+..|......+.+...+...+. +|.+|
T Consensus        77 VVitag~~~~--~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs  122 (319)
T PTZ00117         77 VVITAGVQRK--EEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVT  122 (319)
T ss_pred             EEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999986432  223357788899988889999888886555 55554

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.40  E-value=0.0052  Score=46.51  Aligned_cols=103  Identities=16%  Similarity=0.187  Sum_probs=68.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC---------------------CCCCcEEEEEccC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG---------------------AGDANLRVFEADV   68 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---------------------~~~~~~~~~~~Dl   68 (331)
                      ++|+|.|+ |-+|+.+++.|...|..+++.++.+.-....+.+..-                     ....+++.+..++
T Consensus         3 ~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            58999997 9999999999999998789998875444333333110                     0122566666666


Q ss_pred             CCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           69 LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        69 ~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                       +.+...++++++|+||.+...                 ......+.+.|++.+. .+|+.++.
T Consensus        82 -~~~~~~~~~~~~d~vi~~~d~-----------------~~~~~~l~~~~~~~~~-p~i~~~~~  126 (135)
T PF00899_consen   82 -DEENIEELLKDYDIVIDCVDS-----------------LAARLLLNEICREYGI-PFIDAGVN  126 (135)
T ss_dssp             -SHHHHHHHHHTSSEEEEESSS-----------------HHHHHHHHHHHHHTT--EEEEEEEE
T ss_pred             -ccccccccccCCCEEEEecCC-----------------HHHHHHHHHHHHHcCC-CEEEEEee
Confidence             445677888899999987432                 1123357778888875 68876653

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.40  E-value=0.0015  Score=57.07  Aligned_cols=116  Identities=16%  Similarity=0.182  Sum_probs=71.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      |+||.|+|+ |.+|+.++..|...|..+|+++++++....... .+....  ........++...+. +.++++|+||.+
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~--~~~~~~~~i~~~~d~-~~~~~aDiVii~   77 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAA--PVEGFDTKITGTNDY-EDIAGSDVVVIT   77 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhh--hhcCCCcEEEeCCCH-HHHCCCCEEEEC
Confidence            579999999 999999999999887328999988654432211 111100  000000111111223 347899999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCE-EEEeC
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S  130 (331)
                      ++....  ......+....|......+++...+...+. +|.+|
T Consensus        78 ~~~p~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         78 AGVPRK--PGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            876432  122345677889888888888887775444 55544

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.38  E-value=0.0056  Score=49.61  Aligned_cols=105  Identities=15%  Similarity=0.175  Sum_probs=66.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC----------------------CC-CCCcEEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP----------------------GA-GDANLRVFE   65 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~----------------------~~-~~~~~~~~~   65 (331)
                      ..+|+|.|..| +|+++++.|...|..+++.++.+.-....+.+..                      .. ...+++.+.
T Consensus        19 ~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~   97 (198)
T cd01485          19 SAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVE   97 (198)
T ss_pred             hCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            46899999866 9999999999999768998887543322222110                      00 111345555


Q ss_pred             ccCCC-chHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           66 ADVLD-SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        66 ~Dl~~-~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      .++.+ .+.....+.++|+||.+...         .        .....+-+.|++.++ .+|+.++.
T Consensus        98 ~~~~~~~~~~~~~~~~~dvVi~~~d~---------~--------~~~~~ln~~c~~~~i-p~i~~~~~  147 (198)
T cd01485          98 EDSLSNDSNIEEYLQKFTLVIATEEN---------Y--------ERTAKVNDVCRKHHI-PFISCATY  147 (198)
T ss_pred             cccccchhhHHHHHhCCCEEEECCCC---------H--------HHHHHHHHHHHHcCC-CEEEEEee
Confidence            55542 34456677889999865321         1        123356688888886 48886654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.38  E-value=0.0057  Score=53.31  Aligned_cols=167  Identities=16%  Similarity=0.180  Sum_probs=95.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch-hhcCCCC---CCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~-~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      |+|.|.|+ |.+|..++..|+..|. .+|..++++...... ...+...   .. .......   +   . +.++++|+|
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~-~~~i~~~---d---~-~~l~~aDiV   71 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVK-PVRIYAG---D---Y-ADCKGADVV   71 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccC-CeEEeeC---C---H-HHhCCCCEE
Confidence            37999998 9999999999999992 389999987654321 1111110   01 1222211   1   2 347899999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcch
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (331)
                      |-+++....  ...+..+....|+.....+.+..++.+.+-++.+-|.-.     +.-...+.+..-..      +....
T Consensus        72 iita~~~~~--~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~-----d~~~~~~~~~sg~p------~~~vi  138 (308)
T cd05292          72 VITAGANQK--PGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPV-----DVLTYVAYKLSGLP------PNRVI  138 (308)
T ss_pred             EEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH-----HHHHHHHHHHHCcC------HHHee
Confidence            999986432  233456788899999999999888876554544443200     00000000000000      01123


Q ss_pred             hH-HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC
Q 020110          165 PV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       165 ~~-sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~  199 (331)
                      |. +-+..-++-...++..+++..-++ +.|+|.+.
T Consensus       139 G~gt~LDs~R~~~~la~~~~v~~~~v~-~~viGeHg  173 (308)
T cd05292         139 GSGTVLDTARFRYLLGEHLGVDPRSVH-AYIIGEHG  173 (308)
T ss_pred             cccchhhHHHHHHHHHHHhCCCcccee-ceeeccCC
Confidence            33 222334444445566788887777 45888763

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.37  E-value=0.0049  Score=53.52  Aligned_cols=169  Identities=14%  Similarity=0.086  Sum_probs=99.7

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCcc-chhhcCCCC---C-CCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDS-SHLFALPGA---G-DANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~-~~~~~~~~~---~-~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      ||.|.|+ |.+|+.++..|+..+. .++..++.+.... .....+...   . ..+++...+|       .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            5889998 9999999999998874 4788888765432 112222110   0 0123333333       2567899999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcch
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (331)
                      |-.||.........+..+.+..|..-.+.+.+...+++.+-++.+-|--+     +.-.....+.+...      +....
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPv-----Dv~t~~~~k~sg~p------~~rvi  141 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPL-----DIAVYIAATEFDYP------ANKVI  141 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcH-----HHHHHHHHHHhCcC------hhhee
Confidence            99998743211111147889999999999999999887666655554210     00000000000000      11133


Q ss_pred             hH-HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC
Q 020110          165 PV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       165 ~~-sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~  199 (331)
                      |. +-+..-++-...++..+++...++.. |+|.+.
T Consensus       142 G~gt~LDs~R~~~~la~~l~v~~~~V~~~-ViGeHG  176 (307)
T cd05290         142 GTGTMLDTARLRRIVADKYGVDPKNVTGY-VLGEHG  176 (307)
T ss_pred             cccchHHHHHHHHHHHHHhCCCcccEEEE-EEecCC
Confidence            44 44455555555666778888878754 888774

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.35  E-value=0.0013  Score=48.93  Aligned_cols=92  Identities=21%  Similarity=0.290  Sum_probs=53.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHH-CCCCEEEE-EecCCCccch--hhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLD-NNYTSINA-TVFPGSDSSH--LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~-~g~~~V~~-~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      +||.|.|++|-+|+.+++.+.+ .++ ++.+ ++|+++....  .-++.+..       ...+.-.++++++++.+|+||
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~-~lv~~v~~~~~~~~g~d~g~~~~~~-------~~~~~v~~~l~~~~~~~DVvI   72 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGF-ELVGAVDRKPSAKVGKDVGELAGIG-------PLGVPVTDDLEELLEEADVVI   72 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTE-EEEEEEETTTSTTTTSBCHHHCTSS-------T-SSBEBS-HHHHTTH-SEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCc-EEEEEEecCCcccccchhhhhhCcC-------CcccccchhHHHhcccCCEEE
Confidence            4899999999999999999999 577 6554 4454421110  00110000       111112256778888899999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      .+..          +.        .+...++.+.+++++ +|.
T Consensus        73 DfT~----------p~--------~~~~~~~~~~~~g~~-~Vi   96 (124)
T PF01113_consen   73 DFTN----------PD--------AVYDNLEYALKHGVP-LVI   96 (124)
T ss_dssp             EES-----------HH--------HHHHHHHHHHHHT-E-EEE
T ss_pred             EcCC----------hH--------HhHHHHHHHHhCCCC-EEE
Confidence            9752          22        344677777777753 444

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.33  E-value=0.0014  Score=55.82  Aligned_cols=111  Identities=14%  Similarity=0.072  Sum_probs=72.6

Q ss_pred             EEEeCcchHHHHHHHHHHHHCC----CCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110           12 VCVTGANGFIGTWLVKTLLDNN----YTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g----~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |.|+||+|.+|..++..|+..|    . +|..+++++........ +....  ... ....+.-.++..+.++++|+||.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~-el~L~D~~~~~l~~~~~dl~~~~--~~~-~~~~i~~~~d~~~~~~~aDiVv~   76 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAI-ELVLYDIDEEKLKGVAMDLQDAV--EPL-ADIKVSITDDPYEAFKDADVVII   76 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcce-EEEEEeCCcccchHHHHHHHHhh--hhc-cCcEEEECCchHHHhCCCCEEEE
Confidence            5799999999999999999988    6 89999886644322211 10000  000 01122212234567899999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      .++.....  ..........|+...+.+.+..++...+-++.
T Consensus        77 t~~~~~~~--g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i  116 (263)
T cd00650          77 TAGVGRKP--GMGRLDLLKRNVPIVKEIGDNIEKYSPDAWII  116 (263)
T ss_pred             CCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEE
Confidence            98865432  23346678889999999999998886544433

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.31  E-value=0.0042  Score=51.65  Aligned_cols=105  Identities=15%  Similarity=0.175  Sum_probs=68.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------------------CCC-CCcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GAG-DANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~~-~~~~~~~~~   66 (331)
                      +..+|+|.|+ |-+|+++++.|...|..++++++.+.-+..++.+..                    ... ..+++.+..
T Consensus        20 ~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~   98 (228)
T cd00757          20 KNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNE   98 (228)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecc
Confidence            3468999996 999999999999999768888876543333332211                    000 114555555


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      ++ +.+.+.++++++|+||.+...         +.        .-..+.+.|++.++ .+|+.+..
T Consensus        99 ~i-~~~~~~~~~~~~DvVi~~~d~---------~~--------~r~~l~~~~~~~~i-p~i~~g~~  145 (228)
T cd00757          99 RL-DAENAEELIAGYDLVLDCTDN---------FA--------TRYLINDACVKLGK-PLVSGAVL  145 (228)
T ss_pred             ee-CHHHHHHHHhCCCEEEEcCCC---------HH--------HHHHHHHHHHHcCC-CEEEEEec
Confidence            55 345567788889999987542         11        12356778888875 57776543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.29  E-value=0.011  Score=45.14  Aligned_cols=102  Identities=17%  Similarity=0.205  Sum_probs=65.3

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCC--------------------C-CCcEEEEEccCC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA--------------------G-DANLRVFEADVL   69 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--------------------~-~~~~~~~~~Dl~   69 (331)
                      +|+|.|. |-+|+++++.|...|..+++.++.+.-....+.+....                    . ..+++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899997 99999999999999986888887654333332221100                    0 113444555554


Q ss_pred             CchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        70 ~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      +. .....+.++|+||.+...                 ......+.+.|++.++ .+|..++.
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~-----------------~~~~~~l~~~~~~~~i-~~i~~~~~  123 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDN-----------------IAVRRALNRACKELGI-PVIDAGGL  123 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEcCC
Confidence            32 235667889999977542                 1123457788888885 47776654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.25  E-value=0.0035  Score=51.02  Aligned_cols=105  Identities=14%  Similarity=0.111  Sum_probs=66.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------------------CCC-CCcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GAG-DANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~~-~~~~~~~~~   66 (331)
                      ...+|+|.|. |-+|+++++.|...|..++++++.+.-+..++.+..                    ... ..+++.+..
T Consensus        20 ~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~   98 (202)
T TIGR02356        20 LNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKE   98 (202)
T ss_pred             cCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehh
Confidence            4468999996 999999999999999768999887643322222110                    000 113344444


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      .+. .+.+.+.++++|+||.+...         .        ..-..+.+.|++.++ .+|+.++.
T Consensus        99 ~i~-~~~~~~~~~~~D~Vi~~~d~---------~--------~~r~~l~~~~~~~~i-p~i~~~~~  145 (202)
T TIGR02356        99 RVT-AENLELLINNVDLVLDCTDN---------F--------ATRYLINDACVALGT-PLISAAVV  145 (202)
T ss_pred             cCC-HHHHHHHHhCCCEEEECCCC---------H--------HHHHHHHHHHHHcCC-CEEEEEec
Confidence            443 35567788899999986431         1        122346678888875 47876643

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.20  E-value=0.002  Score=57.25  Aligned_cols=36  Identities=22%  Similarity=0.396  Sum_probs=29.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      |++|+|+||||++|+.|++.|++....+++++.++.
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            469999999999999999999876533777774443

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.18  E-value=0.0034  Score=54.67  Aligned_cols=109  Identities=13%  Similarity=0.130  Sum_probs=71.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccc-hhhcCCCC---CCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS-HLFALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~-~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      +||.|+|+ |.+|+.++..|+..|. .++..++++..... ....+...   .. ...+..     ..+.+ .++++|+|
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~-~~~v~~-----~~dy~-~~~~adiv   75 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLK-NPKIEA-----DKDYS-VTANSKVV   75 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCC-CCEEEE-----CCCHH-HhCCCCEE
Confidence            58999996 9999999999988873 47888887654321 11111110   00 112221     11233 37899999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      |-+||....  ......+.++.|....+.+.+..++++.+-++.
T Consensus        76 vitaG~~~k--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vi  117 (312)
T cd05293          76 IVTAGARQN--EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILL  117 (312)
T ss_pred             EECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEE
Confidence            999986543  233467889999999999999998886554443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.17  E-value=0.011  Score=49.51  Aligned_cols=104  Identities=13%  Similarity=0.068  Sum_probs=66.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--------------------C-CCCcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--------------------A-GDANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--------------------~-~~~~~~~~~~   66 (331)
                      +..+|+|.|+ |.+|+++++.|...|..+++.++.+.-+..++.+..-                    . ...+++.+..
T Consensus        23 ~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~  101 (240)
T TIGR02355        23 KASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINA  101 (240)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence            3468999997 9999999999999997789988886554444332210                    0 0112334433


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      .+ +.+.+.++++++|+||.+...         +        .....+-++|.+.++ .+|+.++
T Consensus       102 ~i-~~~~~~~~~~~~DlVvd~~D~---------~--------~~r~~ln~~~~~~~i-p~v~~~~  147 (240)
T TIGR02355       102 KL-DDAELAALIAEHDIVVDCTDN---------V--------EVRNQLNRQCFAAKV-PLVSGAA  147 (240)
T ss_pred             cC-CHHHHHHHhhcCCEEEEcCCC---------H--------HHHHHHHHHHHHcCC-CEEEEEe
Confidence            33 334566778888999976432         1        123346678888876 4777543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.14  E-value=0.0075  Score=54.71  Aligned_cols=172  Identities=13%  Similarity=0.021  Sum_probs=100.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-------CC-CEEEEEecCCCccchhh-cCCCCC---CCcEEEEEccCCCchHHHHH
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN-------NY-TSINATVFPGSDSSHLF-ALPGAG---DANLRVFEADVLDSGAVSRA   77 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~-------g~-~~V~~~~r~~~~~~~~~-~~~~~~---~~~~~~~~~Dl~~~~~~~~~   77 (331)
                      -+|.|+|++|.+|.+++-.|...       +. .+++.++++........ ++....   ..++.+...|       .+.
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~-------ye~  173 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDP-------YEV  173 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCC-------HHH
Confidence            48999999999999999999887       52 26777777654432211 111100   0022211111       245


Q ss_pred             hcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHh-CCCCEEEEeCccceeccCCCCCCccccCCCCCChhh
Q 020110           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR-FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (331)
Q Consensus        78 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (331)
                      ++++|+||-.||....  ...+..+.++.|+...+.+.+...+ ++.+-+|.+-|--+     +..-...-+.....+  
T Consensus       174 ~kdaDiVVitAG~prk--pG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPv-----Dv~t~v~~k~sg~~~--  244 (444)
T PLN00112        174 FQDAEWALLIGAKPRG--PGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPC-----NTNALICLKNAPNIP--  244 (444)
T ss_pred             hCcCCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcH-----HHHHHHHHHHcCCCC--
Confidence            7899999999997532  2345688999999999999999988 55544444333111     000000001110000  


Q ss_pred             hhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCC
Q 020110          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (331)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~  200 (331)
                         ....-..+.+..-++-...+++.+++...++-..|+|.+..
T Consensus       245 ---~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd  285 (444)
T PLN00112        245 ---AKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST  285 (444)
T ss_pred             ---cceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC
Confidence               01122333444445555556677888888877789998643

>PRK08223 hypothetical protein; Validated

Probab=97.13  E-value=0.011  Score=50.25  Aligned_cols=106  Identities=13%  Similarity=0.161  Sum_probs=68.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--------------------C-CCCcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--------------------A-GDANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--------------------~-~~~~~~~~~~   66 (331)
                      +..+|+|.|+ |-+|++++..|...|..+++.++.+.-+..++.+...                    . ...+++.+..
T Consensus        26 ~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~  104 (287)
T PRK08223         26 RNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPE  104 (287)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence            3468999997 8999999999999997788888876555444443210                    0 0113445555


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      .++ ++...++++++|+||.+.-...               ...-..+.++|++.++ .+|+.|.
T Consensus       105 ~l~-~~n~~~ll~~~DlVvD~~D~~~---------------~~~r~~ln~~c~~~~i-P~V~~~~  152 (287)
T PRK08223        105 GIG-KENADAFLDGVDVYVDGLDFFE---------------FDARRLVFAACQQRGI-PALTAAP  152 (287)
T ss_pred             ccC-ccCHHHHHhCCCEEEECCCCCc---------------HHHHHHHHHHHHHcCC-CEEEEec
Confidence            554 3446677888999986532110               1122346678888886 4777543

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.10  E-value=0.00091  Score=63.43  Aligned_cols=70  Identities=13%  Similarity=0.179  Sum_probs=58.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~   87 (331)
                      .+|+|.|. |-+|+++++.|.++|+ +|+++++++...+...+.      +..++.+|.+|++.++++ ++++|+|+-+
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~------g~~~i~GD~~~~~~L~~a~i~~a~~viv~  488 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRER------GIRAVLGNAANEEIMQLAHLDCARWLLLT  488 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHC------CCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence            37999997 9999999999999999 999999887766666543      788999999999888755 4678987744

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.09  E-value=0.00086  Score=52.09  Aligned_cols=75  Identities=12%  Similarity=0.008  Sum_probs=50.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      +.++|+|+|+ |.+|+.+++.|.+.| + +|++.+|+........+..     +...+..+..+   ..+.++++|+||.
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~-~v~v~~r~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~Dvvi~   87 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAA-KIVIVNRTLEKAKALAERF-----GELGIAIAYLD---LEELLAEADLIIN   87 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHH-----hhcccceeecc---hhhccccCCEEEe
Confidence            3578999997 999999999999996 6 8999988765544332211     11111223333   3344788999999


Q ss_pred             cccCCC
Q 020110           87 VASPCT   92 (331)
Q Consensus        87 ~a~~~~   92 (331)
                      +.....
T Consensus        88 ~~~~~~   93 (155)
T cd01065          88 TTPVGM   93 (155)
T ss_pred             CcCCCC
Confidence            986543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PLN02602 lactate dehydrogenase

Probab=97.09  E-value=0.0056  Score=54.09  Aligned_cols=109  Identities=13%  Similarity=0.191  Sum_probs=72.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch-hhcCCC---CCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPG---AGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~-~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      +||.|+|+ |.+|+.++..|+..+. .++..++.+...... ...+..   ..+ ...+ .++    .+. +.++++|+|
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~-~~~i-~~~----~dy-~~~~daDiV  109 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLP-RTKI-LAS----TDY-AVTAGSDLC  109 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCC-CCEE-EeC----CCH-HHhCCCCEE
Confidence            59999996 9999999999998874 478888876543211 111111   011 1112 111    112 347899999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      |-+||....  ...+..+.+..|+...+.+.+...+++.+-++.
T Consensus       110 VitAG~~~k--~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivi  151 (350)
T PLN02602        110 IVTAGARQI--PGESRLNLLQRNVALFRKIIPELAKYSPDTILL  151 (350)
T ss_pred             EECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEE
Confidence            999987533  233467889999999999999998886554443

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.05  E-value=0.011  Score=48.36  Aligned_cols=104  Identities=14%  Similarity=0.219  Sum_probs=64.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC-------------------CC-CCCcEEEEEcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------------------GA-GDANLRVFEAD   67 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~-~~~~~~~~~~D   67 (331)
                      +..+|+|.|+ |-+|+++++.|...|..+++..+.+.-+..++.+..                   .. ...+++.+...
T Consensus        27 ~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~  105 (212)
T PRK08644         27 KKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEK  105 (212)
T ss_pred             hCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeee
Confidence            3468999996 999999999999999767998887643322222110                   00 01134444444


Q ss_pred             CCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCc
Q 020110           68 VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSS  131 (331)
Q Consensus        68 l~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS  131 (331)
                      +.+ +.+.+.++++|+||.+...         +        .....+.+.|.+. ++ .+|+.+.
T Consensus       106 i~~-~~~~~~~~~~DvVI~a~D~---------~--------~~r~~l~~~~~~~~~~-p~I~~~~  151 (212)
T PRK08644        106 IDE-DNIEELFKDCDIVVEAFDN---------A--------ETKAMLVETVLEHPGK-KLVAASG  151 (212)
T ss_pred             cCH-HHHHHHHcCCCEEEECCCC---------H--------HHHHHHHHHHHHhCCC-CEEEeeh
Confidence            433 4455677888999976321         1        1223466677776 64 4777554

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.04  E-value=0.009  Score=48.68  Aligned_cols=75  Identities=19%  Similarity=0.109  Sum_probs=52.9

Q ss_pred             CcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc
Q 020110            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus         2 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      |.|-+.+.++|||+|| |-+|..-++.|++.|. +|++++.+..  +.+..+... + +++++..+...     ..++++
T Consensus         2 P~~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga-~VtVvsp~~~--~~l~~l~~~-~-~i~~~~~~~~~-----~dl~~~   70 (205)
T TIGR01470         2 PVFANLEGRAVLVVGG-GDVALRKARLLLKAGA-QLRVIAEELE--SELTLLAEQ-G-GITWLARCFDA-----DILEGA   70 (205)
T ss_pred             CeEEEcCCCeEEEECc-CHHHHHHHHHHHHCCC-EEEEEcCCCC--HHHHHHHHc-C-CEEEEeCCCCH-----HHhCCc
Confidence            4455566789999998 9999999999999999 9998854332  333332221 2 78888888752     235677


Q ss_pred             cEEEEc
Q 020110           82 KGVFHV   87 (331)
Q Consensus        82 d~vih~   87 (331)
                      +.||-+
T Consensus        71 ~lVi~a   76 (205)
T TIGR01470        71 FLVIAA   76 (205)
T ss_pred             EEEEEC
Confidence            887743

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.03  E-value=0.017  Score=48.98  Aligned_cols=105  Identities=15%  Similarity=0.274  Sum_probs=64.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------------------CCCC-CcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GAGD-ANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~~~-~~~~~~~~   66 (331)
                      ...+|+|.|+ |.+|+++++.|...|..++++++.+.-...++.+..                    ...+ .+++.+. 
T Consensus        29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~-  106 (268)
T PRK15116         29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD-  106 (268)
T ss_pred             cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe-
Confidence            4468999997 999999999999999658888887543332222211                    0011 0233332 


Q ss_pred             cCCCchHHHHHhc-CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           67 DVLDSGAVSRAVE-GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        67 Dl~~~~~~~~~~~-~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      +..+++...+++. ++|+||.+....                 ..-..|.+.|++.+++ +|..+++
T Consensus       107 ~~i~~e~~~~ll~~~~D~VIdaiD~~-----------------~~k~~L~~~c~~~~ip-~I~~gGa  155 (268)
T PRK15116        107 DFITPDNVAEYMSAGFSYVIDAIDSV-----------------RPKAALIAYCRRNKIP-LVTTGGA  155 (268)
T ss_pred             cccChhhHHHHhcCCCCEEEEcCCCH-----------------HHHHHHHHHHHHcCCC-EEEECCc
Confidence            2223455556664 689998775421                 1233578888888864 6665543

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.03  E-value=0.02  Score=46.41  Aligned_cols=104  Identities=14%  Similarity=0.130  Sum_probs=64.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------------------CCC-CCcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GAG-DANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~~-~~~~~~~~~   66 (331)
                      +.++|+|.|+.| +|+++++.|...|..+++.++.+.-+...+.+..                    ... ..+++.+..
T Consensus        20 ~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~   98 (197)
T cd01492          20 RSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD   98 (197)
T ss_pred             HhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence            346899999855 9999999999999768888876543332222210                    000 113444444


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      .+.  +...+.++++|+||.+...         .        .....+-+.|++.++ .+|+.++.
T Consensus        99 ~~~--~~~~~~~~~~dvVi~~~~~---------~--------~~~~~ln~~c~~~~i-p~i~~~~~  144 (197)
T cd01492          99 DIS--EKPEEFFSQFDVVVATELS---------R--------AELVKINELCRKLGV-KFYATGVH  144 (197)
T ss_pred             Ccc--ccHHHHHhCCCEEEECCCC---------H--------HHHHHHHHHHHHcCC-CEEEEEec
Confidence            443  2244567888998865321         1        123346678888887 47876654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.00  E-value=0.011  Score=52.19  Aligned_cols=95  Identities=17%  Similarity=0.161  Sum_probs=54.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCC--EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ++|.|.||||++|+.|++.|.+.+|.  ++..+....+.-..... .     +......++. +    ..+.++|+||-+
T Consensus         8 ~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~-~-----~~~~~v~~~~-~----~~~~~~D~vf~a   76 (344)
T PLN02383          8 PSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF-E-----GRDYTVEELT-E----DSFDGVDIALFS   76 (344)
T ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee-c-----CceeEEEeCC-H----HHHcCCCEEEEC
Confidence            58999999999999999999887761  33333322221111111 0     2222222332 1    234689999976


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccce
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~  134 (331)
                      ++..                  ....+...+.+.|+ ++|=.|+.+.
T Consensus        77 ~p~~------------------~s~~~~~~~~~~g~-~VIDlS~~fR  104 (344)
T PLN02383         77 AGGS------------------ISKKFGPIAVDKGA-VVVDNSSAFR  104 (344)
T ss_pred             CCcH------------------HHHHHHHHHHhCCC-EEEECCchhh
Confidence            6421                  12345555555564 5787787643

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.00  E-value=0.0036  Score=59.78  Aligned_cols=70  Identities=17%  Similarity=0.193  Sum_probs=58.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~   87 (331)
                      .+|+|.|. |-+|+.+++.|.++|+ +++++++++...+...+.      +..++.||.++++.++++ ++++|.||-+
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~------g~~v~~GDat~~~~L~~agi~~A~~vv~~  471 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKM-RITVLERDISAVNLMRKY------GYKVYYGDATQLELLRAAGAEKAEAIVIT  471 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhC------CCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence            48999996 9999999999999999 999999887766655543      678999999999988765 5778988865

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.00  E-value=0.0082  Score=52.20  Aligned_cols=115  Identities=16%  Similarity=0.130  Sum_probs=70.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh-hcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |+|.|.|+ |.+|..++..|...|+.+|+++++........ .......  ........+.-..++.+ +.++|.||-++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~--~~~~~~~~i~~t~d~~~-~~~aDiVIita   77 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEAS--PVGGFDTKVTGTNNYAD-TANSDIVVITA   77 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhh--hccCCCcEEEecCCHHH-hCCCCEEEEcC
Confidence            48999997 99999999999998853699888754432211 1111100  00000111211122333 68899999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCE-EEEeC
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S  130 (331)
                      +....  ......+.+..|......+++...+++.+. +|.+|
T Consensus        78 g~p~~--~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t  118 (305)
T TIGR01763        78 GLPRK--PGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS  118 (305)
T ss_pred             CCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            86442  123356788899999999999887775443 44444

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.98  E-value=0.017  Score=48.46  Aligned_cols=95  Identities=14%  Similarity=0.121  Sum_probs=70.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      |++|||.|||+ =|+.|++.|.+.|+ .|++..-.....  ....      .+.++.+-+.+.+++.++++  +++.||+
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~-~v~~Svat~~g~--~~~~------~~~v~~G~l~~~~~l~~~l~~~~i~~VID   71 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGV-DIVLSLAGRTGG--PADL------PGPVRVGGFGGAEGLAAYLREEGIDLVID   71 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCC-eEEEEEccCCCC--cccC------CceEEECCCCCHHHHHHHHHHCCCCEEEE
Confidence            57899999976 69999999999998 777655443222  1111      56777888888899999996  5899998


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      ..-++.               ...+.++.++|++.+++.+=|
T Consensus        72 ATHPfA---------------~~is~~a~~ac~~~~ipyiR~   98 (248)
T PRK08057         72 ATHPYA---------------AQISANAAAACRALGIPYLRL   98 (248)
T ss_pred             CCCccH---------------HHHHHHHHHHHHHhCCcEEEE
Confidence            643322               234778999999999875545

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.98  E-value=0.0037  Score=56.14  Aligned_cols=68  Identities=19%  Similarity=0.202  Sum_probs=53.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |++|+|.|| |.+|+.++..+.+.|+ +|++++.++.....  ..      --.++.+|..|.+.+.++++.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~-~v~~~d~~~~~pa~--~~------ad~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGY-KVIVLDPDPDSPAA--QV------ADEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCCCCchh--Hh------CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            578999998 8999999999999999 99999765543221  11      123566899999999999999998753

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.94  E-value=0.0031  Score=54.21  Aligned_cols=69  Identities=16%  Similarity=0.156  Sum_probs=50.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++++|+|. |.+|+.+++.|...|. +|++..|++.......+.      +...+     ..+++.+.+.++|+||++
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~------g~~~~-----~~~~l~~~l~~aDiVint  216 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGA-RVFVGARSSADLARITEM------GLIPF-----PLNKLEEKVAEIDIVINT  216 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC------CCeee-----cHHHHHHHhccCCEEEEC
Confidence            4579999998 8899999999999999 999999876543222221      22211     234566788899999997


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      ..
T Consensus       217 ~P  218 (287)
T TIGR02853       217 IP  218 (287)
T ss_pred             CC
Confidence            53

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.92  E-value=0.019  Score=49.76  Aligned_cols=103  Identities=19%  Similarity=0.177  Sum_probs=67.2

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--------------------C-CCCcEEEEEccCC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--------------------A-GDANLRVFEADVL   69 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--------------------~-~~~~~~~~~~Dl~   69 (331)
                      +|||.|+ |.+|..+++.|...|..++++++.+.-+...+.+..-                    . ...+++.+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899997 9999999999999998789988876544444333210                    0 1114556666776


Q ss_pred             CchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        70 ~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      +.....+.+++.|+||.+...                 ...-..+-+.|+..++ .+|..++.
T Consensus        80 ~~~~~~~f~~~~DvVv~a~Dn-----------------~~ar~~in~~c~~~~i-p~I~~gt~  124 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALDN-----------------LAARRHVNKMCLAADV-PLIESGTT  124 (312)
T ss_pred             CccchHHHHhcCCEEEECCCC-----------------HHHHHHHHHHHHHCCC-CEEEEecC
Confidence            543334667888988875321                 1223356677888775 47776654

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.92  E-value=0.0013  Score=59.64  Aligned_cols=170  Identities=15%  Similarity=0.065  Sum_probs=99.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC---CCC---EEEEEecCCCccchhh----cCC----CCCCCcEEEEEccCCCchHHH
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN---NYT---SINATVFPGSDSSHLF----ALP----GAGDANLRVFEADVLDSGAVS   75 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~---g~~---~V~~~~r~~~~~~~~~----~~~----~~~~~~~~~~~~Dl~~~~~~~   75 (331)
                      -+|+||||+|.||.+|+-.+.+=   |..   .++.++..+.. ..+.    ++.    .... ++.+..       .-.
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~-~~l~G~amDL~D~a~pll~-~v~i~~-------~~~  194 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENL-EKLKGLVMEVEDLAFPLLR-GISVTT-------DLD  194 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCch-hhHHHHHHHHHHhHHhhcC-CcEEEE-------CCH
Confidence            47999999999999999988762   321   23444332111 1111    110    0001 222221       123


Q ss_pred             HHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--CEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           76 RAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        76 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      ..++++|+||-+||....  ...+..+..+.|+.....+.++..++..  .+++.+.|--+ --..    .......+.-
T Consensus       195 ea~~daDvvIitag~prk--~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPv-D~~t----~i~~k~apgi  267 (452)
T cd05295         195 VAFKDAHVIVLLDDFLIK--EGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFL-NLKT----SILIKYAPSI  267 (452)
T ss_pred             HHhCCCCEEEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcH-HHHH----HHHHHHcCCC
Confidence            568899999999987533  2344688899999999999999888865  56666664211 0000    0000111000


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~  200 (331)
                      |     +.+..|.+.+..-++....+++.+++...++-..|+|.+..
T Consensus       268 P-----~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~  309 (452)
T cd05295         268 P-----RKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG  309 (452)
T ss_pred             C-----HHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC
Confidence            1     11345666666556666667788888888887788898654

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08328 hypothetical protein; Provisional

Probab=96.92  E-value=0.026  Score=46.95  Aligned_cols=105  Identities=14%  Similarity=0.137  Sum_probs=65.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC---------------------C-CCCCcEEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP---------------------G-AGDANLRVFE   65 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---------------------~-~~~~~~~~~~   65 (331)
                      ...+|+|.|+ |-+|+++++.|...|..++++++.+.-+..++.+..                     . .....++.+.
T Consensus        26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~  104 (231)
T PRK08328         26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV  104 (231)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence            3468999997 899999999999999768888876543332222110                     0 0011344444


Q ss_pred             ccCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        66 ~Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      ..+ +.+.+.++++++|+||.+...         .        .....+.++|++.++ .+|+.++.
T Consensus       105 ~~~-~~~~~~~~l~~~D~Vid~~d~---------~--------~~r~~l~~~~~~~~i-p~i~g~~~  152 (231)
T PRK08328        105 GRL-SEENIDEVLKGVDVIVDCLDN---------F--------ETRYLLDDYAHKKGI-PLVHGAVE  152 (231)
T ss_pred             ccC-CHHHHHHHHhcCCEEEECCCC---------H--------HHHHHHHHHHHHcCC-CEEEEeec
Confidence            555 344566678888999876432         1        112235567888886 47875543

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.91  E-value=0.021  Score=48.00  Aligned_cols=104  Identities=13%  Similarity=0.082  Sum_probs=66.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------------------CC-CCCcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GA-GDANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~-~~~~~~~~~~   66 (331)
                      +.++|+|.|+ |-+|+++++.|...|..+++.++.+.-+..++.+..                    .. ...+++.+..
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~  109 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINA  109 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence            3469999998 999999999999999768888877544433332210                    00 1114455555


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      .+. .+.+.++++++|+||.+...         +.        .-..+.++|++.++ .+|+.++
T Consensus       110 ~i~-~~~~~~~~~~~DiVi~~~D~---------~~--------~r~~ln~~~~~~~i-p~v~~~~  155 (245)
T PRK05690        110 RLD-DDELAALIAGHDLVLDCTDN---------VA--------TRNQLNRACFAAKK-PLVSGAA  155 (245)
T ss_pred             cCC-HHHHHHHHhcCCEEEecCCC---------HH--------HHHHHHHHHHHhCC-EEEEeee
Confidence            553 34566778899999987531         11        12246677888775 5777443

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.90  E-value=0.0022  Score=50.34  Aligned_cols=65  Identities=15%  Similarity=0.190  Sum_probs=47.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |++|.+.|- |-+|+.+++.|+++|+ +|++.+|++.....+.+.      +++.       .++..++++++|+|+-+-
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~------g~~~-------~~s~~e~~~~~dvvi~~v   65 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEA------GAEV-------ADSPAEAAEQADVVILCV   65 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHT------TEEE-------ESSHHHHHHHBSEEEE-S
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHh------hhhh-------hhhhhhHhhcccceEeec
Confidence            679999996 9999999999999999 999999987666555543      3222       234556677789988764

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.90  E-value=0.0037  Score=55.19  Aligned_cols=77  Identities=17%  Similarity=0.111  Sum_probs=53.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----Ccc
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCK   82 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d   82 (331)
                      .+.+.|||.||+|-+|+..++-+...|. .+++..++....+..+++      ++. ...|..+++-++...+    ++|
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~l------GAd-~vvdy~~~~~~e~~kk~~~~~~D  227 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKL------GAD-EVVDYKDENVVELIKKYTGKGVD  227 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHc------CCc-EeecCCCHHHHHHHHhhcCCCcc
Confidence            3457999999999999999999999994 444455566555555555      222 2366766554444443    489


Q ss_pred             EEEEcccCC
Q 020110           83 GVFHVASPC   91 (331)
Q Consensus        83 ~vih~a~~~   91 (331)
                      +|++|++..
T Consensus       228 vVlD~vg~~  236 (347)
T KOG1198|consen  228 VVLDCVGGS  236 (347)
T ss_pred             EEEECCCCC
Confidence            999999863

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.89  E-value=0.02  Score=50.95  Aligned_cols=104  Identities=18%  Similarity=0.059  Sum_probs=67.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--------------------C-CCCcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--------------------A-GDANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--------------------~-~~~~~~~~~~   66 (331)
                      +..+|+|.|+ |-+|+++++.|...|..++++++.+.-+..++.+..-                    . ...+++.+..
T Consensus        27 ~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~  105 (355)
T PRK05597         27 FDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVR  105 (355)
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEe
Confidence            3469999997 9999999999999998789998886544433333210                    0 1113445555


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      .+. .+...++++++|+||.+...         .        ..-..+.++|.+.+++ +|+.++
T Consensus       106 ~i~-~~~~~~~~~~~DvVvd~~d~---------~--------~~r~~~n~~c~~~~ip-~v~~~~  151 (355)
T PRK05597        106 RLT-WSNALDELRDADVILDGSDN---------F--------DTRHLASWAAARLGIP-HVWASI  151 (355)
T ss_pred             ecC-HHHHHHHHhCCCEEEECCCC---------H--------HHHHHHHHHHHHcCCC-EEEEEE
Confidence            554 34556778899999987532         1        1122356678888864 777554

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.86  E-value=0.023  Score=47.13  Aligned_cols=106  Identities=12%  Similarity=0.171  Sum_probs=65.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--------------------CC-CCcEEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--------------------AG-DANLRVFE   65 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--------------------~~-~~~~~~~~   65 (331)
                      .+..+|+|.|. |-+|+++++.|...|..+++.++.+.-...++.+...                    .. ..+++.+.
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            34568999997 9999999999999997688888775433333322110                    00 11344444


Q ss_pred             ccCCCchHHHHHhc-CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           66 ADVLDSGAVSRAVE-GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        66 ~Dl~~~~~~~~~~~-~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      ..+. ++....++. ++|+||.+...                 ...-..|.+.|++.+++ +|...+.
T Consensus        88 ~~i~-~~~~~~l~~~~~D~VvdaiD~-----------------~~~k~~L~~~c~~~~ip-~I~s~g~  136 (231)
T cd00755          88 EFLT-PDNSEDLLGGDPDFVVDAIDS-----------------IRAKVALIAYCRKRKIP-VISSMGA  136 (231)
T ss_pred             eecC-HhHHHHHhcCCCCEEEEcCCC-----------------HHHHHHHHHHHHHhCCC-EEEEeCC
Confidence            4443 344555553 58999986432                 11233577888888864 6664443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.86  E-value=0.004  Score=53.89  Aligned_cols=68  Identities=18%  Similarity=0.213  Sum_probs=51.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++++|+|. |.+|+.+++.|...|. +|++.+|++.........      +++++     ..+++.+.+.++|+||++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~------G~~~~-----~~~~l~~~l~~aDiVI~t  217 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGA-NVTVGARKSAHLARITEM------GLSPF-----HLSELAEEVGKIDIIFNT  217 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc------CCeee-----cHHHHHHHhCCCCEEEEC
Confidence            3579999997 8899999999999999 999999986543333332      33332     224566778899999997


Q ss_pred             c
Q 020110           88 A   88 (331)
Q Consensus        88 a   88 (331)
                      +
T Consensus       218 ~  218 (296)
T PRK08306        218 I  218 (296)
T ss_pred             C
Confidence            5

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.85  E-value=0.004  Score=55.66  Aligned_cols=74  Identities=15%  Similarity=0.061  Sum_probs=54.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      .++|+|+|+ |-+|...++.|...|. +|++++|++.....+.....      ..+..+..+.+.+.+.+.++|+||+++
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g------~~v~~~~~~~~~l~~~l~~aDvVI~a~  238 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFG------GRIHTRYSNAYEIEDAVKRADLLIGAV  238 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcC------ceeEeccCCHHHHHHHHccCCEEEEcc
Confidence            467999987 9999999999999999 99999887654333322211      123345566677888899999999987


Q ss_pred             cC
Q 020110           89 SP   90 (331)
Q Consensus        89 ~~   90 (331)
                      ..
T Consensus       239 ~~  240 (370)
T TIGR00518       239 LI  240 (370)
T ss_pred             cc
Confidence            54

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.85  E-value=0.022  Score=47.36  Aligned_cols=107  Identities=16%  Similarity=0.089  Sum_probs=67.7

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------------------CC-CCCcEEEEEccCC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GA-GDANLRVFEADVL   69 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~-~~~~~~~~~~Dl~   69 (331)
                      +|||.|+ |-+|..+++.|...|..+++.++.+.-+..++.+..                    .. ...+++.+..++.
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            5899996 999999999999999878998888654433333221                    00 0114556666665


Q ss_pred             CchHH-HHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceecc
Q 020110           70 DSGAV-SRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVP  137 (331)
Q Consensus        70 ~~~~~-~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~  137 (331)
                      +.... ...+++.|+||.+..                 |...-..+-+.|...++ .+|..++. +..+
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~D-----------------n~~aR~~ln~~c~~~~i-plI~~g~~-G~~G  129 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALD-----------------NIIARRYVNGMLIFLIV-PLIESGTE-GFKG  129 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCC-CEEEEccc-CCce
Confidence            43332 356778898887532                 12234457777887775 47776653 4443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.85  E-value=0.0057  Score=48.00  Aligned_cols=56  Identities=16%  Similarity=0.182  Sum_probs=45.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...++|+|+|+++.+|..+++.|.+.|. +|+...|+.                           +++.+.+.++|+||.
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~---------------------------~~l~~~l~~aDiVIs   93 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT---------------------------KNLKEHTKQADIVIV   93 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------------hhHHHHHhhCCEEEE
Confidence            4568999999977889999999999999 888887641                           245677889999998


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      +.+.
T Consensus        94 at~~   97 (168)
T cd01080          94 AVGK   97 (168)
T ss_pred             cCCC
Confidence            7764

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.84  E-value=0.0081  Score=53.14  Aligned_cols=96  Identities=13%  Similarity=0.093  Sum_probs=55.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCCE---EEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NYTS---INATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      |++|.|.||||++|+.+++.|++. .+ .   +..+....+.. ....+.     +-.....++.+++.    +.++|+|
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f-~~~~l~~~ss~~sg~-~~~~f~-----g~~~~v~~~~~~~~----~~~~Div   69 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDF-DLIEPVFFSTSQAGG-AAPSFG-----GKEGTLQDAFDIDA----LKKLDII   69 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCC-CcCcEEEecchhhCC-cccccC-----CCcceEEecCChhH----hcCCCEE
Confidence            468999999999999999966665 44 4   55554432211 111111     11122233333332    4679999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCccc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSIS  133 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~  133 (331)
                      |-+++..                  .+..+...+.+.|.+ .+|=.||.+
T Consensus        70 f~a~~~~------------------~s~~~~~~~~~aG~~~~VID~Ss~f  101 (369)
T PRK06598         70 ITCQGGD------------------YTNEVYPKLRAAGWQGYWIDAASTL  101 (369)
T ss_pred             EECCCHH------------------HHHHHHHHHHhCCCCeEEEECChHH
Confidence            9876521                  234566666667764 466666654

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.83  E-value=0.011  Score=51.38  Aligned_cols=72  Identities=18%  Similarity=0.082  Sum_probs=54.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      .++|+|+|. |-+|..-++.+...|. +|++++|++.+....+++      +...+.- -+|++..+++-+.+|++|.++
T Consensus       167 G~~V~I~G~-GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~l------GAd~~i~-~~~~~~~~~~~~~~d~ii~tv  237 (339)
T COG1064         167 GKWVAVVGA-GGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKL------GADHVIN-SSDSDALEAVKEIADAIIDTV  237 (339)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHh------CCcEEEE-cCCchhhHHhHhhCcEEEECC
Confidence            579999998 5999999999988999 999999998887777766      3333322 225555555544599999988


Q ss_pred             c
Q 020110           89 S   89 (331)
Q Consensus        89 ~   89 (331)
                      +
T Consensus       238 ~  238 (339)
T COG1064         238 G  238 (339)
T ss_pred             C
Confidence            7

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.80  E-value=0.0029  Score=50.75  Aligned_cols=67  Identities=18%  Similarity=0.152  Sum_probs=42.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ||++.|.| +|.||+.|+++|.+.|| +|+.-.|+.++. ....+..+     ..      -...+...+.+.+|+||-.
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~-eV~igs~r~~~~~~a~a~~l~-----~~------i~~~~~~dA~~~aDVVvLA   67 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGH-EVIIGSSRGPKALAAAAAALG-----PL------ITGGSNEDAAALADVVVLA   67 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCC-eEEEecCCChhHHHHHHHhhc-----cc------cccCChHHHHhcCCEEEEe
Confidence            45665555 69999999999999999 888876654433 22222111     11      1223345667788999954


Q ss_pred             c
Q 020110           88 A   88 (331)
Q Consensus        88 a   88 (331)
                      .
T Consensus        68 V   68 (211)
T COG2085          68 V   68 (211)
T ss_pred             c
Confidence            3

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.78  E-value=0.0045  Score=59.30  Aligned_cols=70  Identities=16%  Similarity=0.220  Sum_probs=58.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~   87 (331)
                      ++|+|.|. |-+|+.+++.|.++|+ ++++++.++...+...+.      +..++.||.++++.++++ +++++.||-+
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~------g~~v~~GDat~~~~L~~agi~~A~~vvv~  471 (621)
T PRK03562        401 PRVIIAGF-GRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKF------GMKVFYGDATRMDLLESAGAAKAEVLINA  471 (621)
T ss_pred             CcEEEEec-ChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhc------CCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence            58999997 9999999999999999 999999888776666553      678999999999988754 5678988865

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.77  E-value=0.0018  Score=51.79  Aligned_cols=40  Identities=18%  Similarity=0.248  Sum_probs=30.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF   51 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~   51 (331)
                      |||.|.| .|++|..++..|.+.|| +|++++.++.....+.
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~-~V~g~D~~~~~v~~l~   40 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGH-QVIGVDIDEEKVEALN   40 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTS-EEEEE-S-HHHHHHHH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCC-EEEEEeCChHHHHHHh
Confidence            5899997 59999999999999999 9999998766544443

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.74  E-value=0.0096  Score=51.47  Aligned_cols=102  Identities=17%  Similarity=0.208  Sum_probs=57.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEE-EEEccCC--CchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLR-VFEADVL--DSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~--~~~~~~~~~~~~d~vi   85 (331)
                      |+||.|.||+|+.|..|++.|.....-++...+.+...-..+.....    +.. .+...+.  +.+.+  ..+++|+||
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p----~l~g~~~l~~~~~~~~~~--~~~~~DvvF   75 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHP----NLRGLVDLPFQTIDPEKI--ELDECDVVF   75 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCc----ccccccccccccCChhhh--hcccCCEEE
Confidence            67999999999999999999988764366666544433333332221    111 1111111  22222  345689999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcccee
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAI  135 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~  135 (331)
                      -+-.-.                  ..+.++......+++ +|=+|..+.+
T Consensus        76 lalPhg------------------~s~~~v~~l~~~g~~-VIDLSadfR~  106 (349)
T COG0002          76 LALPHG------------------VSAELVPELLEAGCK-VIDLSADFRL  106 (349)
T ss_pred             EecCch------------------hHHHHHHHHHhCCCe-EEECCccccc
Confidence            764211                  123455555555654 8887875443

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.73  E-value=0.0071  Score=52.61  Aligned_cols=68  Identities=16%  Similarity=0.122  Sum_probs=52.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |++|.|.|| |.+|+.++..-...|+ .|+.++-++...  ....      --..+..+..|++.++++.+.+|+|=.
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~-~v~vLdp~~~~P--A~~v------a~~~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGI-KVIVLDPDADAP--AAQV------ADRVIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCC-EEEEecCCCCCc--hhhc------ccceeecCCCCHHHHHHHHhhCCEEEE
Confidence            578999998 9999999999999999 999986443322  2222      224566777799999999999888754

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.73  E-value=0.01  Score=46.17  Aligned_cols=69  Identities=12%  Similarity=0.136  Sum_probs=45.5

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      +-+.+.++|+|.|| |-+|...++.|++.|+ +|++++  +.....+.++.     .+++....+..     .-++++|.
T Consensus         8 ~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~-----~i~~~~~~~~~-----~dl~~a~l   73 (157)
T PRK06719          8 MFNLHNKVVVIIGG-GKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELP-----YITWKQKTFSN-----DDIKDAHL   73 (157)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhcc-----CcEEEecccCh-----hcCCCceE
Confidence            33567789999998 9999999999999999 999873  33333333321     34443333321     23566777


Q ss_pred             EEE
Q 020110           84 VFH   86 (331)
Q Consensus        84 vih   86 (331)
                      ||-
T Consensus        74 Via   76 (157)
T PRK06719         74 IYA   76 (157)
T ss_pred             EEE
Confidence            774

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.72  E-value=0.0088  Score=50.96  Aligned_cols=99  Identities=15%  Similarity=0.151  Sum_probs=66.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ..+++.|+|+.| +|+-=++.-.+.|+ +|++++++..+ ....+.+      +.+.+..-..|++.++++..--|.++|
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~L------GAd~fv~~~~d~d~~~~~~~~~dg~~~  252 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSL------GADVFVDSTEDPDIMKAIMKTTDGGID  252 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhc------CcceeEEecCCHHHHHHHHHhhcCcce
Confidence            357999999988 99999999889999 99999998744 4444445      555654444477777777665666666


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      .+.....    . +          ...+++.++..|  ++|.++=
T Consensus       253 ~v~~~a~----~-~----------~~~~~~~lk~~G--t~V~vg~  280 (360)
T KOG0023|consen  253 TVSNLAE----H-A----------LEPLLGLLKVNG--TLVLVGL  280 (360)
T ss_pred             eeeeccc----c-c----------hHHHHHHhhcCC--EEEEEeC
Confidence            6542210    0 0          114566666554  7888774

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.72  E-value=0.01  Score=49.38  Aligned_cols=114  Identities=16%  Similarity=0.074  Sum_probs=69.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC--CEEEEEecCCC--ccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      .+-+|.|.||.|.||+.|...|. ...  .+...++....  -...+...      +.........-++.+++.++++|+
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI------~T~s~V~g~~g~~~L~~al~~adv   99 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHI------NTNSSVVGFTGADGLENALKGADV   99 (345)
T ss_pred             CcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCccccccccc------CCCCceeccCChhHHHHHhcCCCE
Confidence            35689999999999999987664 443  12222222110  00000000      111111223335689999999999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      ||-=||..--...  ..++.|++|....+.|..++.+.-.+.+|.+=
T Consensus       100 VvIPAGVPRKPGM--TRDDLFn~NAgIv~~l~~aia~~cP~A~i~vI  144 (345)
T KOG1494|consen  100 VVIPAGVPRKPGM--TRDDLFNINAGIVKTLAAAIAKCCPNALILVI  144 (345)
T ss_pred             EEecCCCCCCCCC--cHHHhhhcchHHHHHHHHHHHhhCccceeEee
Confidence            9999886543222  24678999999999999998877444444433

>PRK07877 hypothetical protein; Provisional

Probab=96.72  E-value=0.019  Score=55.44  Aligned_cols=103  Identities=18%  Similarity=0.241  Sum_probs=70.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhcCCCC--------------------CCCcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGA--------------------GDANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~--------------------~~~~~~~~~~   66 (331)
                      +..+|+|.|. | +|++++..|...|. .+++.++.+.-+..++.+....                    ...+++.+..
T Consensus       106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~  183 (722)
T PRK07877        106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD  183 (722)
T ss_pred             hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence            3468999999 8 99999999999994 6889888865554444443100                    1225666667


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      .++ ++.+.++++++|+||.|.-.                 +..-..+.++|.+.+++ +|+-++
T Consensus       184 ~i~-~~n~~~~l~~~DlVvD~~D~-----------------~~~R~~ln~~a~~~~iP-~i~~~~  229 (722)
T PRK07877        184 GLT-EDNVDAFLDGLDVVVEECDS-----------------LDVKVLLREAARARRIP-VLMATS  229 (722)
T ss_pred             cCC-HHHHHHHhcCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCC-EEEEcC
Confidence            665 56788889999999987531                 11222455678888864 777564

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.72  E-value=0.0078  Score=48.94  Aligned_cols=75  Identities=15%  Similarity=0.093  Sum_probs=49.5

Q ss_pred             CcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc
Q 020110            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus         2 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      |.+-+.+.++|+|+|| |-+|...++.|++.|+ +|+++.+..  ...+..+... + .+.+..-++.     ...+.++
T Consensus         3 Pl~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga-~V~VIs~~~--~~~l~~l~~~-~-~i~~~~~~~~-----~~~l~~a   71 (202)
T PRK06718          3 PLMIDLSNKRVVIVGG-GKVAGRRAITLLKYGA-HIVVISPEL--TENLVKLVEE-G-KIRWKQKEFE-----PSDIVDA   71 (202)
T ss_pred             ceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEcCCC--CHHHHHHHhC-C-CEEEEecCCC-----hhhcCCc
Confidence            4455667889999998 9999999999999999 999886533  2222222111 1 4555443332     2345678


Q ss_pred             cEEEEc
Q 020110           82 KGVFHV   87 (331)
Q Consensus        82 d~vih~   87 (331)
                      |.||-+
T Consensus        72 dlViaa   77 (202)
T PRK06718         72 FLVIAA   77 (202)
T ss_pred             eEEEEc
Confidence            887754

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.72  E-value=0.026  Score=50.40  Aligned_cols=170  Identities=15%  Similarity=0.059  Sum_probs=94.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-C---EEEE--E--ecCCCccch-hhcCCCC----CCCcEEEEEccCCCchHHHH
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-T---SINA--T--VFPGSDSSH-LFALPGA----GDANLRVFEADVLDSGAVSR   76 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~---~V~~--~--~r~~~~~~~-~~~~~~~----~~~~~~~~~~Dl~~~~~~~~   76 (331)
                      -||.|+|++|.+|++++-.|...+. .   +|..  +  +++...... ..++...    .. ++.+...|       .+
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~-~v~i~~~~-------y~  116 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLR-EVSIGIDP-------YE  116 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcC-ceEEecCC-------HH
Confidence            4899999999999999999998873 2   1222  2  443332211 1111100    01 22211111       25


Q ss_pred             HhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCE-EEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           77 AVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRR-VVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        77 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~-~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      .++++|+||-.||....  ......+.++.|+...+.+.+...++. ..- +|.+|-..-+..      ....+.....|
T Consensus       117 ~~kdaDIVVitAG~prk--pg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t------~v~~k~sg~~~  188 (387)
T TIGR01757       117 VFEDADWALLIGAKPRG--PGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNA------LIAMKNAPNIP  188 (387)
T ss_pred             HhCCCCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHH------HHHHHHcCCCc
Confidence            67899999999987532  234568899999999999999998853 444 444442100000      00000000000


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCC
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~  200 (331)
                           ....=..+.+..-++-...+++.+++...++-..|+|.+..
T Consensus       189 -----~rviG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd  229 (387)
T TIGR01757       189 -----RKNFHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST  229 (387)
T ss_pred             -----ccEEEecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC
Confidence                 00112334444455555556677787777776778888643

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.71  E-value=0.0023  Score=54.97  Aligned_cols=75  Identities=17%  Similarity=0.185  Sum_probs=50.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.++++|+|+ |.+|+.++..|.+.|..+|++..|+......+.+...... .+.+   ++    +....+.++|+||++
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~---~~----~~~~~~~~~DivIna  192 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL---DL----ELQEELADFDLIINA  192 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee---cc----cchhccccCCEEEEC
Confidence            4578999997 9999999999999993399999998765544433211100 1111   11    223456789999998


Q ss_pred             ccCC
Q 020110           88 ASPC   91 (331)
Q Consensus        88 a~~~   91 (331)
                      ....
T Consensus       193 Tp~g  196 (278)
T PRK00258        193 TSAG  196 (278)
T ss_pred             CcCC
Confidence            7643

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.68  E-value=0.019  Score=49.84  Aligned_cols=110  Identities=15%  Similarity=0.166  Sum_probs=71.4

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhc-CCCCCC--CcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA-LPGAGD--ANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~-~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      |.|.|+ |.+|+.++..|+..|. .++++++++......... +.....  ...+...   .  .+ .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~---~--~~-~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR---G--GD-YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE---C--CC-HHHhCCCCEEEEc
Confidence            468887 8899999999999882 289999886654322221 111000  0111111   1  11 2468899999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      ++....  ...+..+.+..|+...+.+.+..++++.+-+|.+-
T Consensus        74 ag~p~~--~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~  114 (300)
T cd00300          74 AGAPRK--PGETRLDLINRNAPILRSVITNLKKYGPDAIILVV  114 (300)
T ss_pred             CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence            986543  23346788899999999999999888755444433

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.68  E-value=0.0024  Score=52.81  Aligned_cols=38  Identities=18%  Similarity=0.092  Sum_probs=33.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS   48 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~   48 (331)
                      |+|.|+||+|.+|+.++..|.+.|+ +|++.+|++....
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~-~V~v~~r~~~~~~   38 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGN-KIIIGSRDLEKAE   38 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCC-EEEEEEcCHHHHH
Confidence            4799999999999999999999999 9999988765543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.66  E-value=0.031  Score=49.90  Aligned_cols=104  Identities=17%  Similarity=0.148  Sum_probs=67.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------------------CC-CCCcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GA-GDANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~-~~~~~~~~~~   66 (331)
                      ...+|+|.|+ |-+|+++++.|...|..+++.++.+.-+..++.+..                    .. ...+++.+..
T Consensus        40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~  118 (370)
T PRK05600         40 HNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRE  118 (370)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeee
Confidence            3468999997 899999999999999768999888644433333221                    00 1113555555


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      .++ .+...++++++|+||.+...         .        ..-..+-++|.+.+++ +|+.+.
T Consensus       119 ~i~-~~~~~~~~~~~DlVid~~Dn---------~--------~~r~~in~~~~~~~iP-~v~~~~  164 (370)
T PRK05600        119 RLT-AENAVELLNGVDLVLDGSDS---------F--------ATKFLVADAAEITGTP-LVWGTV  164 (370)
T ss_pred             ecC-HHHHHHHHhCCCEEEECCCC---------H--------HHHHHHHHHHHHcCCC-EEEEEE
Confidence            553 44566788899999987532         1        1222455678887764 777553

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.64  E-value=0.0056  Score=54.87  Aligned_cols=35  Identities=20%  Similarity=0.345  Sum_probs=31.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (331)
                      .+++|.|.||+|.+|+.+++.|.+.|+ .|++.+|+
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~-~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGY-QVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCC-eEEEeCCC
Confidence            457999999999999999999999999 99999764

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.62  E-value=0.0086  Score=51.24  Aligned_cols=55  Identities=13%  Similarity=0.162  Sum_probs=44.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .+.++|+|.|.+|.+|+.++..|+++|. +|+...|..                           ..+.+.++++|+||+
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t---------------------------~~L~~~~~~aDIvI~  208 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT---------------------------QNLPELVKQADIIVG  208 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc---------------------------hhHHHHhccCCEEEE
Confidence            3568999999999999999999999999 999886521                           124455678999999


Q ss_pred             ccc
Q 020110           87 VAS   89 (331)
Q Consensus        87 ~a~   89 (331)
                      +.+
T Consensus       209 AtG  211 (283)
T PRK14192        209 AVG  211 (283)
T ss_pred             ccC
Confidence            886

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.60  E-value=0.0067  Score=55.99  Aligned_cols=75  Identities=11%  Similarity=-0.026  Sum_probs=48.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch-hhcCCCCCCCcEEEEEccCCCchHHHHHhc-CccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~vi   85 (331)
                      .+++|+|||++| +|...++.|.+.|+ +|++.+++...... ...+...   ++.+..+..  +..   .+. ++|.||
T Consensus         4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~---g~~~~~~~~--~~~---~~~~~~d~vV   73 (447)
T PRK02472          4 QNKKVLVLGLAK-SGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEE---GIKVICGSH--PLE---LLDEDFDLMV   73 (447)
T ss_pred             CCCEEEEEeeCH-HHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhc---CCEEEeCCC--CHH---HhcCcCCEEE
Confidence            357899999988 99999999999999 99998875432211 1111111   444444332  222   233 389999


Q ss_pred             EcccCCC
Q 020110           86 HVASPCT   92 (331)
Q Consensus        86 h~a~~~~   92 (331)
                      ..+|...
T Consensus        74 ~s~gi~~   80 (447)
T PRK02472         74 KNPGIPY   80 (447)
T ss_pred             ECCCCCC
Confidence            9988643

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.59  E-value=0.009  Score=52.13  Aligned_cols=77  Identities=19%  Similarity=0.115  Sum_probs=49.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc--------CCCCCCCcEEEEEccCCCchHHHHHhcC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA--------LPGAGDANLRVFEADVLDSGAVSRAVEG   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (331)
                      .++|.|.|+ |.+|+.++..|+..|+ +|++.++++........        +..... ........+.-..++++++++
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~i~~~~~l~~av~~   83 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGL-DVVAWDPAPGAEAALRANVANAWPALERQGL-APGASPARLRFVATIEACVAD   83 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCC-ChhhHHhhceecCCHHHHhcC
Confidence            468999997 9999999999999999 99999987654322111        000000 000001122222346678899


Q ss_pred             ccEEEEcc
Q 020110           81 CKGVFHVA   88 (331)
Q Consensus        81 ~d~vih~a   88 (331)
                      +|.|+-++
T Consensus        84 aDlViEav   91 (321)
T PRK07066         84 ADFIQESA   91 (321)
T ss_pred             CCEEEECC
Confidence            99999875

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.59  E-value=0.0047  Score=56.56  Aligned_cols=67  Identities=12%  Similarity=0.202  Sum_probs=46.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+|.|+||+|.+|+.+++.|.+.|+ +|++.+|++..........     ++.+       ..+....+.++|+||-+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~-----gv~~-------~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKEL-----GVEY-------ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHc-----CCee-------ccCHHHHhccCCEEEEecC
Confidence            4899999999999999999999999 9999998765422221110     2211       1123455678899887653

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.57  E-value=0.0045  Score=50.26  Aligned_cols=68  Identities=19%  Similarity=0.125  Sum_probs=45.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh-cCccEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-EGCKGVF   85 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vi   85 (331)
                      .+.|+|+|+|. |-+|+++++.|.+.|+ +|++.++++..........     +...+  |.   +   +++ .++|+++
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~-----g~~~v--~~---~---~l~~~~~Dv~v   90 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELF-----GATVV--AP---E---EIYSVDADVFA   90 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHc-----CCEEE--cc---h---hhccccCCEEE
Confidence            34579999998 7999999999999999 9998877654433332211     12221  21   1   233 2689999


Q ss_pred             Eccc
Q 020110           86 HVAS   89 (331)
Q Consensus        86 h~a~   89 (331)
                      .+|.
T Consensus        91 p~A~   94 (200)
T cd01075          91 PCAL   94 (200)
T ss_pred             eccc
Confidence            8774

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]

Probab=96.56  E-value=0.03  Score=47.41  Aligned_cols=33  Identities=33%  Similarity=0.573  Sum_probs=25.9

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      =|+|+|+ |.+|++++..|++.|...+..++-+.
T Consensus        76 yVVVVG~-GgVGSwv~nmL~RSG~qKi~iVDfdq  108 (430)
T KOG2018|consen   76 YVVVVGA-GGVGSWVANMLLRSGVQKIRIVDFDQ  108 (430)
T ss_pred             EEEEEec-CchhHHHHHHHHHhcCceEEEechhh
Confidence            4677776 88999999999999975666665543

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.55  E-value=0.045  Score=49.43  Aligned_cols=108  Identities=19%  Similarity=0.061  Sum_probs=68.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--------------------CC-CCcEEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--------------------AG-DANLRVFEAD   67 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--------------------~~-~~~~~~~~~D   67 (331)
                      ..+|+|.|+ |-+|+++++.|...|..++++++.+.-+..++.+..-                    .. ..+++.+...
T Consensus        42 ~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~  120 (392)
T PRK07878         42 NARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFR  120 (392)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEecc
Confidence            458999997 8999999999999998788888775444333332110                    00 1134445555


Q ss_pred             CCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceecc
Q 020110           68 VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVP  137 (331)
Q Consensus        68 l~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~  137 (331)
                      +. .+...++++++|+||.+...         .        ..-..+-++|.+.++ .||+.+.. ..++
T Consensus       121 i~-~~~~~~~~~~~D~Vvd~~d~---------~--------~~r~~ln~~~~~~~~-p~v~~~~~-g~~G  170 (392)
T PRK07878        121 LD-PSNAVELFSQYDLILDGTDN---------F--------ATRYLVNDAAVLAGK-PYVWGSIY-RFEG  170 (392)
T ss_pred             CC-hhHHHHHHhcCCEEEECCCC---------H--------HHHHHHHHHHHHcCC-CEEEEEec-cCEE
Confidence            54 34456778889999976421         1        122246678888875 48886543 4443

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.55  E-value=0.0061  Score=52.11  Aligned_cols=74  Identities=14%  Similarity=0.112  Sum_probs=48.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.++++|+|+ |.+|+.++..|.+.|+ +|++..|+..+...+.+.....+ .+...  ++.+     ....++|+||++
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~-~~~~~--~~~~-----~~~~~~DivIna  185 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYG-EIQAF--SMDE-----LPLHRVDLIINA  185 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcC-ceEEe--chhh-----hcccCccEEEEC
Confidence            3578999998 8999999999999999 99999887655443332211111 12222  1111     123568999999


Q ss_pred             ccCC
Q 020110           88 ASPC   91 (331)
Q Consensus        88 a~~~   91 (331)
                      .+..
T Consensus       186 tp~g  189 (270)
T TIGR00507       186 TSAG  189 (270)
T ss_pred             CCCC
Confidence            8753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.53  E-value=0.016  Score=51.04  Aligned_cols=73  Identities=16%  Similarity=0.142  Sum_probs=48.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc---hHHHHHh--cCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GAVSRAV--EGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~--~~~d~   83 (331)
                      ..+|||+||+|.+|..+++.+...|. +|++++++......+.++      ++..+ .|..+.   .......  .++|+
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~l------Ga~~v-i~~~~~~~~~~~~~~~~~~gvdv  210 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKL------GFDVA-FNYKTVKSLEETLKKASPDGYDC  210 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCEE-EeccccccHHHHHHHhCCCCeEE
Confidence            46899999999999999999888999 999988876655555443      22221 222222   2211222  25899


Q ss_pred             EEEccc
Q 020110           84 VFHVAS   89 (331)
Q Consensus        84 vih~a~   89 (331)
                      |+++.+
T Consensus       211 v~d~~G  216 (325)
T TIGR02825       211 YFDNVG  216 (325)
T ss_pred             EEECCC
Confidence            999765

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.53  E-value=0.05  Score=43.08  Aligned_cols=76  Identities=14%  Similarity=0.178  Sum_probs=49.7

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC-------------------CC-CCCcEEEEEccCCC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------------------GA-GDANLRVFEADVLD   70 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~-~~~~~~~~~~Dl~~   70 (331)
                      +|+|.|+ |-+|+++++.|...|..+++..+.+.-+..++.+..                   .. ...+++.+...+..
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            5899996 999999999999999867999888652222222110                   00 01134445455533


Q ss_pred             chHHHHHhcCccEEEEcc
Q 020110           71 SGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        71 ~~~~~~~~~~~d~vih~a   88 (331)
                       +.+.+.++++|.||.+.
T Consensus        80 -~~~~~~l~~~DlVi~~~   96 (174)
T cd01487          80 -NNLEGLFGDCDIVVEAF   96 (174)
T ss_pred             -hhHHHHhcCCCEEEECC
Confidence             45667788899999863

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.53  E-value=0.021  Score=51.35  Aligned_cols=104  Identities=17%  Similarity=0.112  Sum_probs=65.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------------------CCCC-CcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GAGD-ANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~~~-~~~~~~~~   66 (331)
                      +.++|+|.|+ |-+|++++..|...|..+++.++++.-+..++.+..                    ...+ .+++.+..
T Consensus       134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~  212 (376)
T PRK08762        134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE  212 (376)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence            3468999986 889999999999999878998888632222222110                    0001 13344444


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      .+. .+.+.++++++|+||++...         ..        .-..+.++|++.++ .+|+.+.
T Consensus       213 ~~~-~~~~~~~~~~~D~Vv~~~d~---------~~--------~r~~ln~~~~~~~i-p~i~~~~  258 (376)
T PRK08762        213 RVT-SDNVEALLQDVDVVVDGADN---------FP--------TRYLLNDACVKLGK-PLVYGAV  258 (376)
T ss_pred             cCC-hHHHHHHHhCCCEEEECCCC---------HH--------HHHHHHHHHHHcCC-CEEEEEe
Confidence            443 34566778889999987532         11        12246678888886 4787654

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.50  E-value=0.013  Score=53.05  Aligned_cols=71  Identities=15%  Similarity=0.109  Sum_probs=53.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   85 (331)
                      +.|+|+|+|+ |.+|+.++..+.+.|+ +|++++.++......  .      .-.++..|..|.+.+.++++  ++|.|+
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~-~v~~~~~~~~~~~~~--~------ad~~~~~~~~d~~~l~~~~~~~~id~vi   80 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGV-EVIAVDRYANAPAMQ--V------AHRSHVIDMLDGDALRAVIEREKPDYIV   80 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCCCCchHH--h------hhheEECCCCCHHHHHHHHHHhCCCEEE
Confidence            3569999997 8999999999999999 999888765432221  1      11246678888888888887  689988


Q ss_pred             Ecc
Q 020110           86 HVA   88 (331)
Q Consensus        86 h~a   88 (331)
                      -..
T Consensus        81 ~~~   83 (395)
T PRK09288         81 PEI   83 (395)
T ss_pred             Eee
Confidence            643

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.47  E-value=0.0056  Score=53.90  Aligned_cols=78  Identities=14%  Similarity=0.145  Sum_probs=48.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCC--CcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGD--ANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ||+|.|.|+ |-+|+.++..|.+.|+ +|++++|++.....+........  .+... ...+.-..+..+.++++|+||-
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~vi~   77 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGH-DVTLWARDPEQAAEINADRENPRYLPGIKL-PDNLRATTDLAEALADADLILV   77 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCCCEEEE
Confidence            568999996 9999999999999999 99999987654443332210000  00000 0011112344456778999997


Q ss_pred             ccc
Q 020110           87 VAS   89 (331)
Q Consensus        87 ~a~   89 (331)
                      +..
T Consensus        78 ~v~   80 (325)
T PRK00094         78 AVP   80 (325)
T ss_pred             eCC
Confidence            653

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.44  E-value=0.032  Score=46.42  Aligned_cols=97  Identities=26%  Similarity=0.304  Sum_probs=55.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchh--hcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHL--FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      |++|.|.|++|-.|+.+++.+.+.. +.-+-++.|..+.....  -++.     +......-+.+  +......++|++|
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~-----g~~~~gv~v~~--~~~~~~~~~DV~I   74 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELA-----GLGLLGVPVTD--DLLLVKADADVLI   74 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhc-----cccccCceeec--chhhcccCCCEEE
Confidence            5799999999999999999999876 52344455544322110  0110     01111111111  1333445789999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      .+..+          .        ++..+++.|.+++++ +|. +|+
T Consensus        75 DFT~P----------~--------~~~~~l~~~~~~~~~-lVI-GTT  101 (266)
T COG0289          75 DFTTP----------E--------ATLENLEFALEHGKP-LVI-GTT  101 (266)
T ss_pred             ECCCc----------h--------hhHHHHHHHHHcCCC-eEE-ECC
Confidence            87543          1        355678888888753 443 444

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.42  E-value=0.0081  Score=51.64  Aligned_cols=76  Identities=18%  Similarity=0.170  Sum_probs=50.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|+|.|+ |..|+.++..|.+.|..+|++++|+..+...+.+..........+..     .+++.+.+.++|.||++
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~-----~~~~~~~~~~aDiVIna  199 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA-----GSDLAAALAAADGLVHA  199 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe-----ccchHhhhCCCCEEEEC
Confidence            3578999998 77999999999999976899999987655544332111000222211     12344566789999999


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      ..
T Consensus       200 Tp  201 (284)
T PRK12549        200 TP  201 (284)
T ss_pred             Cc
Confidence            53

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.37  E-value=0.041  Score=48.39  Aligned_cols=94  Identities=18%  Similarity=0.234  Sum_probs=54.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHH-CCCCE---EEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLD-NNYTS---INATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~-~g~~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      ++|.|.||||++|+.+++.|.+ ..+ .   +..+....+.-..+ .+..  . .+.+.  ++ +++    .+.++|+||
T Consensus         6 ~~VaIvGATG~vG~ell~lL~~h~~f-~v~~l~~~aS~~saGk~~-~~~~--~-~l~v~--~~-~~~----~~~~~Divf   73 (347)
T PRK06728          6 YHVAVVGATGAVGQKIIELLEKETKF-NIAEVTLLSSKRSAGKTV-QFKG--R-EIIIQ--EA-KIN----SFEGVDIAF   73 (347)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHCCCC-CcccEEEEECcccCCCCe-eeCC--c-ceEEE--eC-CHH----HhcCCCEEE
Confidence            4899999999999999999985 455 4   55454332221111 1111  0 22222  22 222    236799999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccce
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~  134 (331)
                      -+++..                  ....+...+.+.|+ .+|=.||.+.
T Consensus        74 ~a~~~~------------------~s~~~~~~~~~~G~-~VID~Ss~fR  103 (347)
T PRK06728         74 FSAGGE------------------VSRQFVNQAVSSGA-IVIDNTSEYR  103 (347)
T ss_pred             ECCChH------------------HHHHHHHHHHHCCC-EEEECchhhc
Confidence            776421                  13356666666664 5777777644

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.37  E-value=0.032  Score=48.36  Aligned_cols=83  Identities=11%  Similarity=0.099  Sum_probs=52.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |.+|.|.||||++|..|++.|.+..+-++..+..+...                    |+.+   ....+.++|+||-+.
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~--------------------~~~~---~~~~~~~~DvvFlal   58 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK--------------------DAAA---RRELLNAADVAILCL   58 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC--------------------cccC---chhhhcCCCEEEECC
Confidence            45899999999999999998887763255555433221                    1111   223456789888654


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccc
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~  133 (331)
                      ..          .        ....++..+.+.|+ ++|=.|+.+
T Consensus        59 p~----------~--------~s~~~~~~~~~~g~-~VIDlSadf   84 (313)
T PRK11863         59 PD----------D--------AAREAVALIDNPAT-RVIDASTAH   84 (313)
T ss_pred             CH----------H--------HHHHHHHHHHhCCC-EEEECChhh
Confidence            31          1        13345555555665 588888765

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.37  E-value=0.032  Score=49.42  Aligned_cols=32  Identities=31%  Similarity=0.496  Sum_probs=26.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEec
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN-YTSINATVF   42 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r   42 (331)
                      ++|.|+|+||++|++|++.|.+.. . +|..+..
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~-~l~~v~~   33 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYF-ELAKVVA   33 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCc-eEEEEEE
Confidence            389999999999999999888865 6 7777643

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.36  E-value=0.018  Score=45.92  Aligned_cols=69  Identities=13%  Similarity=0.030  Sum_probs=48.1

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      ....++|.|.|. |-||+.+++.|..-|. +|++++|...........      .+        ...++.++++++|+|+
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~------~~--------~~~~l~ell~~aDiv~   96 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEF------GV--------EYVSLDELLAQADIVS   96 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHT------TE--------EESSHHHHHHH-SEEE
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCc-eeEEecccCChhhhcccc------cc--------eeeehhhhcchhhhhh
Confidence            345689999996 9999999999999999 999999877654312111      12        1234667888899988


Q ss_pred             EcccC
Q 020110           86 HVASP   90 (331)
Q Consensus        86 h~a~~   90 (331)
                      .+...
T Consensus        97 ~~~pl  101 (178)
T PF02826_consen   97 LHLPL  101 (178)
T ss_dssp             E-SSS
T ss_pred             hhhcc
Confidence            87654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.31  E-value=0.015  Score=53.63  Aligned_cols=82  Identities=15%  Similarity=0.127  Sum_probs=50.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccchhhcCCCC-CCCcEEEE----Ec-cCCCchHHHHHhcC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGA-GDANLRVF----EA-DVLDSGAVSRAVEG   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~----~~-Dl~~~~~~~~~~~~   80 (331)
                      ||+|.|.|. |++|..++..|.+.|  + +|++++.++.....+..-... ...+..-+    .+ .+.-..++...+++
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~-~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~   78 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDI-EVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAE   78 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCC-eEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhc
Confidence            568999975 999999999999985  7 899999876665444321000 00000000    01 11112234456778


Q ss_pred             ccEEEEcccCCC
Q 020110           81 CKGVFHVASPCT   92 (331)
Q Consensus        81 ~d~vih~a~~~~   92 (331)
                      +|++|-|.+...
T Consensus        79 advi~I~V~TP~   90 (473)
T PLN02353         79 ADIVFVSVNTPT   90 (473)
T ss_pred             CCEEEEEeCCCC
Confidence            999998887544

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.31  E-value=0.011  Score=53.68  Aligned_cols=76  Identities=11%  Similarity=0.059  Sum_probs=54.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...++|+|.|+ |-+|+.+++.|.+.|..+|++..|+......+.+..+    ..     .....+++...+.++|+||+
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~~-----~~~~~~~l~~~l~~aDiVI~  248 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----NA-----SAHYLSELPQLIKKADIIIA  248 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----CC-----eEecHHHHHHHhccCCEEEE
Confidence            34579999998 9999999999999996589999888655444443211    11     12223456778889999999


Q ss_pred             cccCCC
Q 020110           87 VASPCT   92 (331)
Q Consensus        87 ~a~~~~   92 (331)
                      +.+...
T Consensus       249 aT~a~~  254 (414)
T PRK13940        249 AVNVLE  254 (414)
T ss_pred             CcCCCC
Confidence            987543

>PRK07411 hypothetical protein; Validated

Probab=96.30  E-value=0.069  Score=48.17  Aligned_cols=104  Identities=17%  Similarity=0.082  Sum_probs=66.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------------------CC-CCCcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GA-GDANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~-~~~~~~~~~~   66 (331)
                      +..+|+|.|+ |-+|+++++.|...|..+++.++.+.-+..++.+..                    .. ...+++.+..
T Consensus        37 ~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~  115 (390)
T PRK07411         37 KAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYET  115 (390)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEec
Confidence            3568999997 899999999999999878888877644443333321                    00 1114555555


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      .++. +...+++.++|+||.+...         ..        .-..+-++|.+.++ .+|+.+.
T Consensus       116 ~~~~-~~~~~~~~~~D~Vvd~~d~---------~~--------~r~~ln~~~~~~~~-p~v~~~~  161 (390)
T PRK07411        116 RLSS-ENALDILAPYDVVVDGTDN---------FP--------TRYLVNDACVLLNK-PNVYGSI  161 (390)
T ss_pred             ccCH-HhHHHHHhCCCEEEECCCC---------HH--------HHHHHHHHHHHcCC-CEEEEEE
Confidence            5543 4456778889999987532         11        12235567777774 4777443

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.29  E-value=0.017  Score=49.20  Aligned_cols=57  Identities=16%  Similarity=0.169  Sum_probs=46.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...++|+|+|.++.+|+.++..|+++|. .|+...++.                           ..+.+.++++|+||.
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------------~~l~~~~~~ADIVIs  207 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------------KDMASYLKDADVIVS  207 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------------hhHHHHHhhCCEEEE
Confidence            4568999999999999999999999999 999886531                           135567888999998


Q ss_pred             cccCC
Q 020110           87 VASPC   91 (331)
Q Consensus        87 ~a~~~   91 (331)
                      ..+..
T Consensus       208 Avg~p  212 (286)
T PRK14175        208 AVGKP  212 (286)
T ss_pred             CCCCC
Confidence            87753

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.29  E-value=0.011  Score=51.56  Aligned_cols=72  Identities=15%  Similarity=0.105  Sum_probs=51.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|+|.|+ |-+|+.+++.|...|..+|++.+|++.....+....     +...+     +.+++.+.+.++|+||.+
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-----g~~~~-----~~~~~~~~l~~aDvVi~a  245 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-----GGNAV-----PLDELLELLNEADVVISA  245 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----CCeEE-----eHHHHHHHHhcCCEEEEC
Confidence            3579999997 999999999999877438999988765543333321     12222     224566777889999998


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      .+.
T Consensus       246 t~~  248 (311)
T cd05213         246 TGA  248 (311)
T ss_pred             CCC
Confidence            764

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.27  E-value=0.026  Score=45.77  Aligned_cols=78  Identities=14%  Similarity=0.196  Sum_probs=52.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC-------------------CC-CCCcEEEEEcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------------------GA-GDANLRVFEAD   67 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~-~~~~~~~~~~D   67 (331)
                      +.++|+|.|+ |.+|+.++..|...|..+++..+++.-+..++.+..                   .. ...+++.+..+
T Consensus        20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~   98 (200)
T TIGR02354        20 EQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK   98 (200)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence            4468999998 889999999999999867999888632222222110                   00 01134455555


Q ss_pred             CCCchHHHHHhcCccEEEEc
Q 020110           68 VLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        68 l~~~~~~~~~~~~~d~vih~   87 (331)
                      ++ .+.+.++++++|.||.+
T Consensus        99 i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        99 IT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             CC-HhHHHHHhcCCCEEEEC
Confidence            54 35567778889999976

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.27  E-value=0.0098  Score=52.29  Aligned_cols=73  Identities=22%  Similarity=0.177  Sum_probs=48.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCC-chHHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-SGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~vih~   87 (331)
                      ..+++|+||+|.+|..+++.+...|. +|+++.+++.....+...      ....+ .|..+ .+.+.+. .++|.|+++
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~-~~~d~v~~~  233 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKEL------GADYV-IDGSKFSEDVKKL-GGADVVIEL  233 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHc------CCcEE-EecHHHHHHHHhc-cCCCEEEEC
Confidence            45899999999999999999999999 999988766544444332      11111 12211 1222222 268999998


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ++.
T Consensus       234 ~g~  236 (332)
T cd08259         234 VGS  236 (332)
T ss_pred             CCh
Confidence            763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK14851 hypothetical protein; Provisional

Probab=96.26  E-value=0.086  Score=50.89  Aligned_cols=105  Identities=13%  Similarity=0.166  Sum_probs=68.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------------------CC-CCCcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GA-GDANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~-~~~~~~~~~~   66 (331)
                      +..+|+|.|. |.+|++++..|...|..+++.++.+.-+..++.+..                    .. ...+++.+..
T Consensus        42 ~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~  120 (679)
T PRK14851         42 AEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPA  120 (679)
T ss_pred             hcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEec
Confidence            3568999995 999999999999999768888776544433333311                    00 1225667767


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      .++ .+.+.++++++|+||.+.-...               +..-..+.+.|++.+++ +|+.+
T Consensus       121 ~i~-~~n~~~~l~~~DvVid~~D~~~---------------~~~r~~l~~~c~~~~iP-~i~~g  167 (679)
T PRK14851        121 GIN-ADNMDAFLDGVDVVLDGLDFFQ---------------FEIRRTLFNMAREKGIP-VITAG  167 (679)
T ss_pred             CCC-hHHHHHHHhCCCEEEECCCCCc---------------HHHHHHHHHHHHHCCCC-EEEee
Confidence            774 4567788899999997643211               11122567788888865 66644

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.26  E-value=0.037  Score=50.39  Aligned_cols=40  Identities=18%  Similarity=0.231  Sum_probs=34.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~   50 (331)
                      ||+|.|.|. |++|..++..|.+.|+ +|+++++++.....+
T Consensus         3 ~~kI~VIGl-G~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l   42 (415)
T PRK11064          3 FETISVIGL-GYIGLPTAAAFASRQK-QVIGVDINQHAVDTI   42 (415)
T ss_pred             ccEEEEECc-chhhHHHHHHHHhCCC-EEEEEeCCHHHHHHH
Confidence            468999986 9999999999999999 999999887655443

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.25  E-value=0.056  Score=44.68  Aligned_cols=96  Identities=15%  Similarity=0.085  Sum_probs=65.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      |++|+|.|||+ =++.|++.|...+. .++..+-.........+       ....+.+-..+.+.+.+.++  ++|.||.
T Consensus         2 ~~~ilvlGGT~-Dar~la~~L~~~~~-~~~~ss~t~~g~~l~~~-------~~~~~~~G~l~~e~l~~~l~e~~i~llID   72 (257)
T COG2099           2 MMRILLLGGTS-DARALAKKLAAAPV-DIILSSLTGYGAKLAEQ-------IGPVRVGGFLGAEGLAAFLREEGIDLLID   72 (257)
T ss_pred             CceEEEEeccH-HHHHHHHHhhccCc-cEEEEEcccccccchhc-------cCCeeecCcCCHHHHHHHHHHcCCCEEEE
Confidence            57999999986 58999999999885 44433322222211111       12255677778889999985  5899997


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      ..-          |..     ...+.|.+++|++.|++.+-|
T Consensus        73 ATH----------PyA-----a~iS~Na~~aake~gipy~r~   99 (257)
T COG2099          73 ATH----------PYA-----ARISQNAARAAKETGIPYLRL   99 (257)
T ss_pred             CCC----------hHH-----HHHHHHHHHHHHHhCCcEEEE
Confidence            532          222     245789999999999886666

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.25  E-value=0.0079  Score=51.70  Aligned_cols=77  Identities=14%  Similarity=-0.026  Sum_probs=51.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.++++|.|+ |-.|+.++..|.+.|..+|+++.|+..+...+.+...... .+  ..  +...+++...+.++|+|||+
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~--~~--~~~~~~~~~~~~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VI--TR--LEGDSGGLAIEKAAEVLVST  197 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cc--ee--ccchhhhhhcccCCCEEEEC
Confidence            3578999997 9999999999999997689999998765555443221100 11  11  11113344556789999998


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ...
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.23  E-value=0.013  Score=51.79  Aligned_cols=73  Identities=18%  Similarity=0.148  Sum_probs=49.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCc----hHHHHHh-cCcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDS----GAVSRAV-EGCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~----~~~~~~~-~~~d   82 (331)
                      ..+|||+||+|.+|..+++.+...|. +|++++++......+.+ +      ++..+ .|..+.    +.+.+.. .++|
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~l------Ga~~v-i~~~~~~~~~~~i~~~~~~gvd  223 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKL------GFDDA-FNYKEEPDLDAALKRYFPNGID  223 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc------CCcee-EEcCCcccHHHHHHHhCCCCcE
Confidence            46899999999999999999989999 99998887665555544 3      22221 222211    2233322 3589


Q ss_pred             EEEEccc
Q 020110           83 GVFHVAS   89 (331)
Q Consensus        83 ~vih~a~   89 (331)
                      +|+++.+
T Consensus       224 ~v~d~~g  230 (338)
T cd08295         224 IYFDNVG  230 (338)
T ss_pred             EEEECCC
Confidence            9999865

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.22  E-value=0.018  Score=52.17  Aligned_cols=66  Identities=17%  Similarity=0.075  Sum_probs=47.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|+|+|. |.||+.+++.|...|. +|++.++++.........      ++++.        .+.++++++|+||.+
T Consensus       211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~------G~~v~--------~l~eal~~aDVVI~a  274 (425)
T PRK05476        211 AGKVVVVAGY-GDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMD------GFRVM--------TMEEAAELGDIFVTA  274 (425)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhc------CCEec--------CHHHHHhCCCEEEEC
Confidence            4679999997 9999999999999999 999998876543222111      22221        134667789999986


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      .+
T Consensus       275 TG  276 (425)
T PRK05476        275 TG  276 (425)
T ss_pred             CC
Confidence            54

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.19  E-value=0.079  Score=44.48  Aligned_cols=97  Identities=19%  Similarity=0.233  Sum_probs=65.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~   87 (331)
                      |+|||.|||+ =|+.|++.|.++|+ -++.+.-+-.. .......   . ...++.+-+.+.+.+.++++  +++.||..
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~-~~~~~~~---~-~~~v~~G~lg~~~~l~~~l~~~~i~~vIDA   73 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGG-ELLKPEL---P-GLEVRVGRLGDEEGLAEFLRENGIDAVIDA   73 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhH-hhhcccc---C-CceEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            5999999976 69999999999996 22222222111 1111110   1 56778888889999999995  58999986


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      .-++.               ...+.|..++|++.+++.+=|
T Consensus        74 THPfA---------------~~is~na~~a~~~~~ipylR~   99 (249)
T PF02571_consen   74 THPFA---------------AEISQNAIEACRELGIPYLRF   99 (249)
T ss_pred             CCchH---------------HHHHHHHHHHHhhcCcceEEE
Confidence            43322               234778999999999875544

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.18  E-value=0.012  Score=51.32  Aligned_cols=74  Identities=20%  Similarity=0.214  Sum_probs=49.1

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      |+.+.   +++|.|+| +|-+|+.++..|.+.|+ .+|++.+|++.........      ++...   ..  .+..+.++
T Consensus         1 ~~~~~---~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~------g~~~~---~~--~~~~~~~~   65 (307)
T PRK07502          1 MSAPL---FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARAREL------GLGDR---VT--TSAAEAVK   65 (307)
T ss_pred             CCccC---CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhC------CCCce---ec--CCHHHHhc
Confidence            55554   46899998 69999999999999883 2899998876544333322      11000   11  12345567


Q ss_pred             CccEEEEccc
Q 020110           80 GCKGVFHVAS   89 (331)
Q Consensus        80 ~~d~vih~a~   89 (331)
                      ++|+||.+..
T Consensus        66 ~aDvViiavp   75 (307)
T PRK07502         66 GADLVILCVP   75 (307)
T ss_pred             CCCEEEECCC
Confidence            8999998764

>PRK06849 hypothetical protein; Provisional

Probab=96.16  E-value=0.023  Score=51.35  Aligned_cols=36  Identities=17%  Similarity=0.080  Sum_probs=32.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      +|+|||||+...+|..+++.|.+.|+ +|++++.++.
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~   39 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGH-TVILADSLKY   39 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCch
Confidence            57999999999999999999999999 9999987653

>PRK14852 hypothetical protein; Provisional

Probab=96.16  E-value=0.059  Score=53.44  Aligned_cols=106  Identities=14%  Similarity=0.165  Sum_probs=69.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------------------CC-CCCcEEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GA-GDANLRVFEA   66 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~-~~~~~~~~~~   66 (331)
                      +..+|+|.|. |.+|+.++..|...|..++++++-+.-+..++.+..                    .. ...+++.+..
T Consensus       331 ~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~~  409 (989)
T PRK14852        331 LRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPE  409 (989)
T ss_pred             hcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEec
Confidence            4568999995 899999999999999878888877544444433321                    00 1114555555


Q ss_pred             cCCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        67 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      .+ +.+.+.++++++|+||.+.-...               +..-..+.+.|.+.+++ +|+.++
T Consensus       410 ~I-~~en~~~fl~~~DiVVDa~D~~~---------------~~~rr~l~~~c~~~~IP-~I~ag~  457 (989)
T PRK14852        410 GV-AAETIDAFLKDVDLLVDGIDFFA---------------LDIRRRLFNRALELGIP-VITAGP  457 (989)
T ss_pred             CC-CHHHHHHHhhCCCEEEECCCCcc---------------HHHHHHHHHHHHHcCCC-EEEeec
Confidence            55 45667788899999997653211               11123566778888864 777554

>PLN00203 glutamyl-tRNA reductase

Probab=96.16  E-value=0.011  Score=55.04  Aligned_cols=75  Identities=20%  Similarity=0.186  Sum_probs=52.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|+|+|+ |-+|+.+++.|...|..+|+++.|+......+....+    ++....   ...+++...+.++|+||.+
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~----g~~i~~---~~~~dl~~al~~aDVVIsA  336 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP----DVEIIY---KPLDEMLACAAEADVVFTS  336 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC----CCceEe---ecHhhHHHHHhcCCEEEEc
Confidence            3579999998 9999999999999996579999988766555443221    111111   2223456778899999987


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      .+.
T Consensus       337 T~s  339 (519)
T PLN00203        337 TSS  339 (519)
T ss_pred             cCC
Confidence            643

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.16  E-value=0.021  Score=49.20  Aligned_cols=80  Identities=15%  Similarity=0.063  Sum_probs=48.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC---ccchhhcCCCC-CCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~---~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      +.++++|.|+ |..+++++..|...|..+|+++.|+..   +...+.+.... ....+.+  .++.+.+.+...+.++|.
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~~~aDi  199 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEALASADI  199 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhcccCCE
Confidence            4578999998 555999999999999768999999854   22222221110 0001222  222222234455678999


Q ss_pred             EEEcccC
Q 020110           84 VFHVASP   90 (331)
Q Consensus        84 vih~a~~   90 (331)
                      |||+...
T Consensus       200 vINaTp~  206 (288)
T PRK12749        200 LTNGTKV  206 (288)
T ss_pred             EEECCCC
Confidence            9997643

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.15  E-value=0.053  Score=47.29  Aligned_cols=66  Identities=14%  Similarity=0.235  Sum_probs=48.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|.|.|- |-||+.+++.|...|. +|++.+|......           ++..+    ....++.++++++|+|+.+
T Consensus       135 ~g~tvgIvG~-G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----------~~~~~----~~~~~l~e~l~~aDvvv~~  197 (312)
T PRK15469        135 EDFTIGILGA-GVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----------GVQSF----AGREELSAFLSQTRVLINL  197 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----------Cceee----cccccHHHHHhcCCEEEEC
Confidence            4579999995 9999999999999999 9999987543211           11111    1245688899999999987


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ...
T Consensus       198 lPl  200 (312)
T PRK15469        198 LPN  200 (312)
T ss_pred             CCC
Confidence            643

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=96.15  E-value=0.051  Score=48.80  Aligned_cols=77  Identities=26%  Similarity=0.138  Sum_probs=55.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchH------HHHHhcCcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA------VSRAVEGCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~------~~~~~~~~d   82 (331)
                      ..+|||+|| |.||-.|.+-|.-.|+++|.+++.+.-+..++.+       ++-+.+-|+..+.+      +.++..+++
T Consensus        12 ~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNR-------QFLFrkkhVgqsKA~vA~~~v~~Fnpn~~   83 (603)
T KOG2013|consen   12 SGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNR-------QFLFRKKHVGQSKATVAAKAVKQFNPNIK   83 (603)
T ss_pred             cCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhh-------hheeehhhcCchHHHHHHHHHHHhCCCCc
Confidence            458999998 8899999999999998889998887766666554       44455566655432      223334688


Q ss_pred             EEEEcccCCCC
Q 020110           83 GVFHVASPCTL   93 (331)
Q Consensus        83 ~vih~a~~~~~   93 (331)
                      .+-++|.+...
T Consensus        84 l~~yhanI~e~   94 (603)
T KOG2013|consen   84 LVPYHANIKEP   94 (603)
T ss_pred             eEeccccccCc
Confidence            88888876553

>PRK07574 formate dehydrogenase; Provisional

Probab=96.13  E-value=0.033  Score=49.86  Aligned_cols=69  Identities=22%  Similarity=0.110  Sum_probs=48.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...|+|.|.|. |-||+.+++.|...|. +|++.+|...........      ++.       -..++.++++++|+|+.
T Consensus       190 L~gktVGIvG~-G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~------g~~-------~~~~l~ell~~aDvV~l  254 (385)
T PRK07574        190 LEGMTVGIVGA-GRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQEL------GLT-------YHVSFDSLVSVCDVVTI  254 (385)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhc------Cce-------ecCCHHHHhhcCCEEEE
Confidence            34679999996 9999999999999999 999998765322111111      211       12357788899999987


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      +...
T Consensus       255 ~lPl  258 (385)
T PRK07574        255 HCPL  258 (385)
T ss_pred             cCCC
Confidence            7643

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.13  E-value=0.029  Score=48.74  Aligned_cols=110  Identities=14%  Similarity=0.109  Sum_probs=67.3

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh----hcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      |.|+|+ |.+|+.++..|...|..+|+.+++++......    ...........++..     ..+. +.++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~-----t~d~-~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTG-----TNDY-EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEE-----cCCH-HHhCCCCEEEEe
Confidence            468998 99999999999888732899998875432111    111000000111111     0112 347899999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEE-EEeC
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV-VVTS  130 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-v~~S  130 (331)
                      ++.....  .....+....|....+.+++...+...+.. |.+|
T Consensus        74 ~g~p~~~--~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          74 AGIPRKP--GMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             cCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9864431  223455677888888888888887765544 4434

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.12  E-value=0.08  Score=38.79  Aligned_cols=85  Identities=16%  Similarity=0.308  Sum_probs=50.0

Q ss_pred             CeEEEeCcc---hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110           10 ETVCVTGAN---GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGat---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |+|.|.|++   +-.|..+++.|.+.|+ +|+.+  ++......         +... .-+      +.+.-+.+|.++-
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~-~v~~V--np~~~~i~---------G~~~-y~s------l~e~p~~iDlavv   61 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGY-EVYPV--NPKGGEIL---------GIKC-YPS------LAEIPEPIDLAVV   61 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT--EEEEE--STTCSEET---------TEE--BSS------GGGCSST-SEEEE
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCC-EEEEE--CCCceEEC---------cEEe-ecc------ccCCCCCCCEEEE
Confidence            589999988   7799999999999999 99988  33321110         1211 122      2221346788886


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      +...          .        -+..+++.|.+.|++.+++.++
T Consensus        62 ~~~~----------~--------~~~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   62 CVPP----------D--------KVPEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             -S-H----------H--------HHHHHHHHHHHHT-SEEEE-TT
T ss_pred             EcCH----------H--------HHHHHHHHHHHcCCCEEEEEcc
Confidence            5432          1        2446788888889999999886

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.12  E-value=0.033  Score=43.22  Aligned_cols=58  Identities=16%  Similarity=0.155  Sum_probs=42.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ..+|+|+|.|.++.+|+.|+..|.++|. .|+......                           ..+.+.++++|+||-
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~a-tVt~~h~~T---------------------------~~l~~~~~~ADIVVs   85 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGA-TVTICHSKT---------------------------KNLQEITRRADIVVS   85 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TTS---------------------------SSHHHHHTTSSEEEE
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCC-eEEeccCCC---------------------------CcccceeeeccEEee
Confidence            4578999999999999999999999999 888774432                           235567788999998


Q ss_pred             cccCCC
Q 020110           87 VASPCT   92 (331)
Q Consensus        87 ~a~~~~   92 (331)
                      .+|...
T Consensus        86 a~G~~~   91 (160)
T PF02882_consen   86 AVGKPN   91 (160)
T ss_dssp             -SSSTT
T ss_pred             eecccc
Confidence            887643

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1

Probab=96.11  E-value=0.15  Score=46.32  Aligned_cols=124  Identities=15%  Similarity=0.038  Sum_probs=68.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC--------------------CCCC-CCcEEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------------------PGAG-DANLRVFEAD   67 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--------------------~~~~-~~~~~~~~~D   67 (331)
                      ..+|+|.|++| +|..+++.|.-.|...+++++-+.-....+...                    .+.. ...++++..+
T Consensus        20 ~s~VlliG~gg-lGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~V~i~~~~e~   98 (425)
T cd01493          20 SAHVCLLNATA-TGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPDVNGSAVEES   98 (425)
T ss_pred             hCeEEEEcCcH-HHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            35899999755 999999999999976888886543222111110                    0000 0123444444


Q ss_pred             CCCc-hHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC--CCc
Q 020110           68 VLDS-GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW--KGK  144 (331)
Q Consensus        68 l~~~-~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~--~~~  144 (331)
                      +.+. +....++.+.|+||-+-.          .       ......|.+.|++.++ .+|+.+|. +.++....  +..
T Consensus        99 ~~~ll~~~~~f~~~fdiVI~t~~----------~-------~~~~~~L~~~c~~~~i-PlI~~~s~-G~~G~v~v~~~~h  159 (425)
T cd01493          99 PEALLDNDPSFFSQFTVVIATNL----------P-------ESTLLRLADVLWSANI-PLLYVRSY-GLYGYIRIQLKEH  159 (425)
T ss_pred             cchhhhhHHHHhcCCCEEEECCC----------C-------HHHHHHHHHHHHHcCC-CEEEEecc-cCEEEEEEEECCe
Confidence            4321 112355677788874211          1       1122346788888886 48888876 45543221  234


Q ss_pred             cccCCCCC
Q 020110          145 VFDETSWT  152 (331)
Q Consensus       145 ~~~E~~~~  152 (331)
                      .+.|.++.
T Consensus       160 ~i~et~p~  167 (425)
T cd01493         160 TIVESHPD  167 (425)
T ss_pred             EEEECCCC
Confidence            45555443

APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.11  E-value=0.024  Score=51.98  Aligned_cols=74  Identities=15%  Similarity=0.095  Sum_probs=51.0

Q ss_pred             cCCCeEEEeCc----------------chHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCC
Q 020110            7 KEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD   70 (331)
Q Consensus         7 ~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   70 (331)
                      .++|+||||+|                ||-.|..|++.+...|+ +|+.+.- +....    .+.    +++++..  ..
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA-~VtlI~G-p~~~~----~p~----~v~~i~V--~t  321 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGA-EVTLISG-PVDLA----DPQ----GVKVIHV--ES  321 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCC-cEEEEeC-CcCCC----CCC----CceEEEe--cC
Confidence            45789999975                79999999999999999 9998862 22211    111    5666543  33


Q ss_pred             chHHHHHhc---CccEEEEcccCCC
Q 020110           71 SGAVSRAVE---GCKGVFHVASPCT   92 (331)
Q Consensus        71 ~~~~~~~~~---~~d~vih~a~~~~   92 (331)
                      .+++.+.+.   +.|++|++|++..
T Consensus       322 a~eM~~av~~~~~~Di~I~aAAVaD  346 (475)
T PRK13982        322 ARQMLAAVEAALPADIAIFAAAVAD  346 (475)
T ss_pred             HHHHHHHHHhhCCCCEEEEeccccc
Confidence            444444443   3799999999754

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.10  E-value=0.0085  Score=52.26  Aligned_cols=76  Identities=18%  Similarity=0.222  Sum_probs=59.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch-HHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG-AVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~d~vih~   87 (331)
                      +++||+.|+ ||+.+.++..|.+++--+|++..|...+...+-+-     .+++.+..|+.+++ .+++..++.|.|+-+
T Consensus         2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~-----~~~~av~ldv~~~~~~L~~~v~~~D~viSL   75 (445)
T KOG0172|consen    2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKG-----INIKAVSLDVADEELALRKEVKPLDLVISL   75 (445)
T ss_pred             CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhcC-----CCccceEEEccchHHHHHhhhcccceeeee
Confidence            578999996 99999999999988632888887765554443321     16788999999998 899999999999987


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      -..
T Consensus        76 lP~   78 (445)
T KOG0172|consen   76 LPY   78 (445)
T ss_pred             ccc
Confidence            643

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.09  E-value=0.0049  Score=53.10  Aligned_cols=39  Identities=15%  Similarity=0.123  Sum_probs=34.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH   49 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~   49 (331)
                      +++|.|.|+ |.+|+.++..|+..|+ +|+.+++++.....
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~   43 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGV-DVLVFETTEELATA   43 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence            568999997 9999999999999999 99999998765443

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.09  E-value=0.018  Score=42.61  Aligned_cols=32  Identities=25%  Similarity=0.570  Sum_probs=26.8

Q ss_pred             eEEEeCcchHHHHHHHHHHHHC-CCCEEEEE-ecC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDN-NYTSINAT-VFP   43 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~-~r~   43 (331)
                      |+.|+|++|.+|..+++.|.+. ++ ++.++ .|+
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~-~l~av~~~~   34 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDF-EVVALAASA   34 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCc-eEEEEEech
Confidence            5889999999999999999985 77 77777 443

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.08  E-value=0.016  Score=52.95  Aligned_cols=72  Identities=17%  Similarity=0.159  Sum_probs=51.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|+|+|+ |-+|+.+++.|...|..+|++..|++.....+....     +.     +..+.+++.+.+.++|+||.+
T Consensus       181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~-----g~-----~~~~~~~~~~~l~~aDvVI~a  249 (423)
T PRK00045        181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF-----GG-----EAIPLDELPEALAEADIVISS  249 (423)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CC-----cEeeHHHHHHHhccCCEEEEC
Confidence            4579999997 999999999999999657888888765443333211     11     122234566777889999998


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      .+.
T Consensus       250 T~s  252 (423)
T PRK00045        250 TGA  252 (423)
T ss_pred             CCC
Confidence            754

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.06  E-value=0.012  Score=50.91  Aligned_cols=36  Identities=17%  Similarity=0.270  Sum_probs=32.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (331)
                      +++|.|.|+ |.+|+.++..|...|+ +|++.++++..
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~-~V~l~d~~~~~   38 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGF-DVTIYDISDEA   38 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCC-eEEEEeCCHHH
Confidence            468999997 9999999999999999 99999987654

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=96.05  E-value=0.02  Score=38.80  Aligned_cols=34  Identities=26%  Similarity=0.318  Sum_probs=30.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (331)
                      +|+|.|| |++|-.++..|.+.|. +|+.+.|++..
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~-~vtli~~~~~~   34 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGK-EVTLIERSDRL   34 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTS-EEEEEESSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCc-EEEEEeccchh
Confidence            5889997 9999999999999999 99999887654

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.04  E-value=0.027  Score=50.86  Aligned_cols=66  Identities=14%  Similarity=0.079  Sum_probs=48.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|+|+|+ |.||..+++.+...|. +|+++++++.........      ++..+     +   +.+.+.++|+||.+
T Consensus       201 ~GktVvViG~-G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~------G~~~~-----~---~~e~v~~aDVVI~a  264 (413)
T cd00401         201 AGKVAVVAGY-GDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAME------GYEVM-----T---MEEAVKEGDIFVTT  264 (413)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhc------CCEEc-----c---HHHHHcCCCEEEEC
Confidence            4679999997 9999999999999999 999988876554433332      33322     1   23456789999987


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      .+
T Consensus       265 tG  266 (413)
T cd00401         265 TG  266 (413)
T ss_pred             CC
Confidence            65

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.02  E-value=0.031  Score=50.36  Aligned_cols=68  Identities=15%  Similarity=0.130  Sum_probs=52.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEEcc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHVA   88 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~a   88 (331)
                      ||+|.|+ |..|..+++.+.+.|+ .|++++.++.....  ..      --.++..|..|.+.+.++++  ++|+|+...
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~-~v~~~d~~~~~~~~--~~------ad~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGV-EVIAVDRYANAPAM--QV------AHRSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCCCCchh--hh------CceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            5899996 9999999999999999 99999876543222  11      11345678888888888887  699988644

This enzyme is an alternative to PurN (TIGR00639)

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.01  E-value=0.026  Score=49.25  Aligned_cols=52  Identities=13%  Similarity=0.144  Sum_probs=41.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      .|+|.|.|+ |.+|+.+++.|.+.|+ +|++.+|+..                          .++.++++++|+||-+.
T Consensus         4 ~m~I~iiG~-G~~G~~lA~~l~~~G~-~V~~~~r~~~--------------------------~~~~~~~~~advvi~~v   55 (308)
T PRK14619          4 PKTIAILGA-GAWGSTLAGLASANGH-RVRVWSRRSG--------------------------LSLAAVLADADVIVSAV   55 (308)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCC-EEEEEeCCCC--------------------------CCHHHHHhcCCEEEEEC
Confidence            458999986 9999999999999999 9999887642                          12445567788888664

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.00  E-value=0.012  Score=51.80  Aligned_cols=74  Identities=18%  Similarity=0.100  Sum_probs=47.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEc-----cCCCchHHHHHhcCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA-----DVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----Dl~~~~~~~~~~~~~d~   83 (331)
                      +|+|.|.|+ |-+|+.++..|.+.|+ +|++..|++.....+.....    +..+..+     .+.-..+..++++++|+
T Consensus         4 ~m~I~iIG~-G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~----~~~~~~g~~~~~~~~~~~~~~e~~~~aD~   77 (328)
T PRK14618          4 GMRVAVLGA-GAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERE----NREYLPGVALPAELYPTADPEEALAGADF   77 (328)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCc----ccccCCCCcCCCCeEEeCCHHHHHcCCCE
Confidence            568999986 9999999999999999 99999997654433332210    0000001     01112234456778999


Q ss_pred             EEEcc
Q 020110           84 VFHVA   88 (331)
Q Consensus        84 vih~a   88 (331)
                      ||-+.
T Consensus        78 Vi~~v   82 (328)
T PRK14618         78 AVVAV   82 (328)
T ss_pred             EEEEC
Confidence            98764

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.00  E-value=0.044  Score=46.80  Aligned_cols=74  Identities=18%  Similarity=0.148  Sum_probs=45.8

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHC--CCCEEEEE-ecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDN--NYTSINAT-VFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA   77 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   77 (331)
                      |+.|+   +++|.|.|. |.||+.+++.|.+.  ++ +|.++ +|++..........     +.      ..-..+++++
T Consensus         1 ~~~m~---~irIGIIG~-G~IG~~~a~~L~~~~~~~-el~aV~dr~~~~a~~~a~~~-----g~------~~~~~~~eel   64 (271)
T PRK13302          1 MSSRP---ELRVAIAGL-GAIGKAIAQALDRGLPGL-TLSAVAVRDPQRHADFIWGL-----RR------PPPVVPLDQL   64 (271)
T ss_pred             CCCCC---eeEEEEECc-cHHHHHHHHHHHhcCCCe-EEEEEECCCHHHHHHHHHhc-----CC------CcccCCHHHH
Confidence            56664   469999996 99999999999873  67 77644 44443322222111     10      0011234556


Q ss_pred             hcCccEEEEcccC
Q 020110           78 VEGCKGVFHVASP   90 (331)
Q Consensus        78 ~~~~d~vih~a~~   90 (331)
                      +.++|+|+-++..
T Consensus        65 l~~~D~Vvi~tp~   77 (271)
T PRK13302         65 ATHADIVVEAAPA   77 (271)
T ss_pred             hcCCCEEEECCCc
Confidence            6789999988753

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.00  E-value=0.026  Score=52.33  Aligned_cols=76  Identities=14%  Similarity=0.064  Sum_probs=54.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc-------------h---
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-------------G---   72 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-------------~---   72 (331)
                      ..+|+|+|+ |-+|...+..+...|. +|+++++++......+.+      +.+++..|..+.             +   
T Consensus       165 g~kVlViGa-G~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aesl------GA~~v~i~~~e~~~~~~gya~~~s~~~~~  236 (509)
T PRK09424        165 PAKVLVIGA-GVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESM------GAEFLELDFEEEGGSGDGYAKVMSEEFIK  236 (509)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCeEEEeccccccccccchhhhcchhHHH
Confidence            469999998 9999999999999999 999999887766665554      445444333221             1   


Q ss_pred             H----HHHHhcCccEEEEcccCCC
Q 020110           73 A----VSRAVEGCKGVFHVASPCT   92 (331)
Q Consensus        73 ~----~~~~~~~~d~vih~a~~~~   92 (331)
                      .    +.+.+.++|+||.+++...
T Consensus       237 ~~~~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        237 AEMALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHHHHHhccCCCCEEEECCCCCc
Confidence            1    1222356999999998643

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.00  E-value=0.16  Score=44.11  Aligned_cols=66  Identities=11%  Similarity=0.034  Sum_probs=44.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      +|.|.| .|-+|+.+++.|++.|+ +|++.+|++.....+.+.      ++..    ..+++++.+.++++|+||-+.
T Consensus         2 ~Ig~IG-lG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~------g~~~----~~~~~e~~~~~~~~dvvi~~v   67 (301)
T PRK09599          2 QLGMIG-LGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEE------GATG----ADSLEELVAKLPAPRVVWLMV   67 (301)
T ss_pred             EEEEEc-ccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC------CCee----cCCHHHHHhhcCCCCEEEEEe
Confidence            789998 59999999999999999 999999887655444332      2221    123333333333468888664

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=95.99  E-value=0.035  Score=50.59  Aligned_cols=39  Identities=21%  Similarity=0.306  Sum_probs=33.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~   50 (331)
                      |+|.|.|. |++|..++..|.+.|+ +|++.++++.....+
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~-~V~~~d~~~~~v~~l   39 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGH-EVTGVDIDQEKVDKL   39 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCC-eEEEEECCHHHHHHh
Confidence            37999985 9999999999999999 999999877654443

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=95.97  E-value=0.018  Score=49.96  Aligned_cols=65  Identities=14%  Similarity=0.187  Sum_probs=47.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |++|.|.|. |.+|..+++.|++.|+ +|++.+|++.....+...      ++.       ...+..++++++|+||-+.
T Consensus         1 m~~Ig~IGl-G~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~------g~~-------~~~s~~~~~~~aDvVi~~v   65 (296)
T PRK15461          1 MAAIAFIGL-GQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDK------GAT-------PAASPAQAAAGAEFVITML   65 (296)
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHc------CCc-------ccCCHHHHHhcCCEEEEec
Confidence            458999985 9999999999999999 999999887655444332      111       1223445677889888764

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.97  E-value=0.092  Score=45.53  Aligned_cols=163  Identities=17%  Similarity=0.121  Sum_probs=92.7

Q ss_pred             EeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch-hhcCCCC---CCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           14 VTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        14 VtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~-~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |.|+ |.+|++++..|+..+. .++..++++...... ...+...   ...++++..+   +    .+.++++|+||-.|
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSG---D----YSDCKDADLVVITA   72 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecC---C----HHHHCCCCEEEECC
Confidence            4565 9999999999988874 478888876543221 1111110   0102323211   1    25678999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC-CCccccCCCCCChhhhhccCcchhH-
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPV-  166 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~-~~~~~~E~~~~~~~~~~~~~~~y~~-  166 (331)
                      |....  ...+..+.++.|+...+.+.+.+++++.+-+|.+-|-      |-. -...+.......+      ....|. 
T Consensus        73 g~~rk--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN------P~d~~t~~~~~~sg~p~------~~viG~g  138 (299)
T TIGR01771        73 GAPQK--PGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN------PVDILTYVAWKLSGFPK------NRVIGSG  138 (299)
T ss_pred             CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC------HHHHHHHHHHHHhCCCH------HHEEecc
Confidence            87432  2334678899999999999999988865544433331      100 0000000000000      013344 


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~  199 (331)
                      +.+..-++-...++..+++..-++. .|+|.+.
T Consensus       139 t~LDs~R~~~~la~~l~v~~~~V~~-~v~GeHG  170 (299)
T TIGR01771       139 TVLDTARLRYLLAEKLGVDPQSVHA-YIIGEHG  170 (299)
T ss_pred             chHHHHHHHHHHHHHhCcCcCeEEE-EEEecCC
Confidence            3444455555556667777777774 5888863

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.92  E-value=0.017  Score=51.73  Aligned_cols=75  Identities=20%  Similarity=0.201  Sum_probs=58.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .+.++|||+|+ |=+|.-++++|.+.|...|++..|.......+...       +.   ++....+++...+.++|+||-
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~-------~~---~~~~~l~el~~~l~~~DvVis  244 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKK-------LG---AEAVALEELLEALAEADVVIS  244 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH-------hC---CeeecHHHHHHhhhhCCEEEE
Confidence            35679999998 99999999999999965999998887666555442       11   555566778888999999998


Q ss_pred             cccCCC
Q 020110           87 VASPCT   92 (331)
Q Consensus        87 ~a~~~~   92 (331)
                      +.+...
T Consensus       245 sTsa~~  250 (414)
T COG0373         245 STSAPH  250 (414)
T ss_pred             ecCCCc
Confidence            765433

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.90  E-value=0.016  Score=49.86  Aligned_cols=66  Identities=17%  Similarity=0.171  Sum_probs=44.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+|.|.| .|.+|+.++..|.+.|+ +|++.+|++.........      +.    .+... ... +.++++|.||-+..
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~------g~----~~~~~-~~~-~~~~~aDlVilavp   66 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIER------GL----VDEAS-TDL-SLLKDCDLVILALP   66 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHC------CC----ccccc-CCH-hHhcCCCEEEEcCC
Confidence            3799998 59999999999999999 999999876544433322      11    01110 112 24678999997653

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=95.89  E-value=0.03  Score=52.30  Aligned_cols=75  Identities=12%  Similarity=0.061  Sum_probs=48.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC--------CCCCCCcEEE-EEccCCCchHHHHHhcC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------PGAGDANLRV-FEADVLDSGAVSRAVEG   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~-~~~Dl~~~~~~~~~~~~   80 (331)
                      |+|.|+|+ |.+|+.++..|++.|+ +|++.++++.....+.+.        ....  .... ..+.+.-..++.+++++
T Consensus         5 ~kIavIG~-G~MG~~iA~~la~~G~-~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~g~i~~~~~~~ea~~~   80 (495)
T PRK07531          5 MKAACIGG-GVIGGGWAARFLLAGI-DVAVFDPHPEAERIIGEVLANAERAYAMLT--DAPLPPEGRLTFCASLAEAVAG   80 (495)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHhhhc--cchhhhhhceEeeCCHHHHhcC
Confidence            58999986 9999999999999999 999999876654332110        0000  0000 00112222346677889


Q ss_pred             ccEEEEcc
Q 020110           81 CKGVFHVA   88 (331)
Q Consensus        81 ~d~vih~a   88 (331)
                      +|+|+-+.
T Consensus        81 aD~Vieav   88 (495)
T PRK07531         81 ADWIQESV   88 (495)
T ss_pred             CCEEEEcC
Confidence            99999764

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.88  E-value=0.037  Score=47.88  Aligned_cols=26  Identities=31%  Similarity=0.539  Sum_probs=23.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY   34 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~   34 (331)
                      |++|.|.|+||.+|+.+++.|.+..+
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f   26 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHF   26 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCC
Confidence            46899999999999999999988653

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.86  E-value=0.047  Score=46.29  Aligned_cols=79  Identities=18%  Similarity=0.153  Sum_probs=54.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh-cCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-EGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vih   86 (331)
                      ...+|+|+||+|-+|+-+.+-..-+|+ +|+++.-++.+.+.+.+..+-.. .+.+..-|+  .+.+.+++ +++|+.|.
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~-~idyk~~d~--~~~L~~a~P~GIDvyfe  225 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDA-GIDYKAEDF--AQALKEACPKGIDVYFE  225 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCce-eeecCcccH--HHHHHHHCCCCeEEEEE
Confidence            456999999999999998887777899 99999888888888776432111 122222222  12344444 46899999


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      |.|-
T Consensus       226 NVGg  229 (340)
T COG2130         226 NVGG  229 (340)
T ss_pred             cCCc
Confidence            8774

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.85  E-value=0.038  Score=50.47  Aligned_cols=66  Identities=17%  Similarity=0.097  Sum_probs=47.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|+|+|. |.||+.+++.|...|. +|++..+++.........      ++++.        .+.++++++|+||-+
T Consensus       253 aGKtVgVIG~-G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~------G~~~~--------~leell~~ADIVI~a  316 (476)
T PTZ00075        253 AGKTVVVCGY-GDVGKGCAQALRGFGA-RVVVTEIDPICALQAAME------GYQVV--------TLEDVVETADIFVTA  316 (476)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhc------Cceec--------cHHHHHhcCCEEEEC
Confidence            4689999996 8999999999999999 999988775543221111      22221        255678899999987


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      .+
T Consensus       317 tG  318 (476)
T PTZ00075        317 TG  318 (476)
T ss_pred             CC
Confidence            54

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.84  E-value=0.023  Score=51.74  Aligned_cols=72  Identities=14%  Similarity=0.085  Sum_probs=50.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|+|+|+ |-+|..+++.|...|..+|++.+|+......+....     +...+     +.+++.+.+.++|+||.+
T Consensus       179 ~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~-----g~~~i-----~~~~l~~~l~~aDvVi~a  247 (417)
T TIGR01035       179 KGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL-----GGEAV-----KFEDLEEYLAEADIVISS  247 (417)
T ss_pred             cCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCeEe-----eHHHHHHHHhhCCEEEEC
Confidence            4579999997 999999999999999338999988765433332211     11122     224566778899999998


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      .+.
T Consensus       248 T~s  250 (417)
T TIGR01035       248 TGA  250 (417)
T ss_pred             CCC
Confidence            653

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=95.83  E-value=0.062  Score=47.24  Aligned_cols=95  Identities=22%  Similarity=0.251  Sum_probs=54.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC--CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ++|.|.||||++|..|++.|.+..|  .++..+..+.+.-..+. +..  . .+.+-  ++   +.  ..+.++|+||-+
T Consensus         5 ~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~-~~~--~-~~~v~--~~---~~--~~~~~~Dvvf~a   73 (336)
T PRK08040          5 WNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR-FGG--K-SVTVQ--DA---AE--FDWSQAQLAFFV   73 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE-ECC--c-ceEEE--eC---ch--hhccCCCEEEEC
Confidence            5999999999999999999988533  26666654432222211 110  0 11111  22   11  123678999976


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccce
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~  134 (331)
                      ++..                  ....++..+.+.|+ ++|=.|+.+.
T Consensus        74 ~p~~------------------~s~~~~~~~~~~g~-~VIDlS~~fR  101 (336)
T PRK08040         74 AGRE------------------ASAAYAEEATNAGC-LVIDSSGLFA  101 (336)
T ss_pred             CCHH------------------HHHHHHHHHHHCCC-EEEECChHhc
Confidence            6421                  23356666656665 5787777644

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=95.81  E-value=0.046  Score=51.90  Aligned_cols=69  Identities=17%  Similarity=0.166  Sum_probs=52.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .+|+|+|.|| |.+|+.+++.+.+.|+ +|++++.++.....  ..      --..+.+|..|.+.+.++.+++|+|..
T Consensus        21 ~~k~IgIIGg-Gqlg~mla~aA~~lG~-~Vi~ld~~~~apa~--~~------AD~~~v~~~~D~~~l~~~a~~~dvIt~   89 (577)
T PLN02948         21 SETVVGVLGG-GQLGRMLCQAASQMGI-KVKVLDPLEDCPAS--SV------AARHVVGSFDDRAAVREFAKRCDVLTV   89 (577)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCCCCchh--hh------CceeeeCCCCCHHHHHHHHHHCCEEEE
Confidence            4679999998 8999999999999999 99999776542211  11      112455888898888888888888744

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.81  E-value=0.0043  Score=53.63  Aligned_cols=39  Identities=15%  Similarity=0.227  Sum_probs=33.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH   49 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~   49 (331)
                      +++|.|.|+ |.+|+.++..|++.|+ +|++.++++.....
T Consensus         1 ~~~V~VIG~-G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~   39 (288)
T PRK09260          1 IEKLVVVGA-GVMGRGIAYVFAVSGF-QTTLVDIKQEQLES   39 (288)
T ss_pred             CcEEEEECc-cHHHHHHHHHHHhCCC-cEEEEeCCHHHHHH
Confidence            358999998 9999999999999999 99999987665444

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=95.79  E-value=0.085  Score=45.53  Aligned_cols=81  Identities=9%  Similarity=0.096  Sum_probs=51.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcccC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASP   90 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~~   90 (331)
                      +|.|.|++|+.|..|++.|....+-++..+..+..                    .+   +.+..++++++|+||-+...
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~--------------------~~---~~~~~~~~~~~D~vFlalp~   59 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR--------------------KD---AAERAKLLNAADVAILCLPD   59 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc--------------------cC---cCCHhHhhcCCCEEEECCCH
Confidence            79999999999999999998875325555532211                    11   11233566789998876532


Q ss_pred             CCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccc
Q 020110           91 CTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (331)
Q Consensus        91 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~  133 (331)
                                .        ....++..+.+.++ ++|=.|+.+
T Consensus        60 ----------~--------~s~~~~~~~~~~g~-~VIDlSadf   83 (310)
T TIGR01851        60 ----------D--------AAREAVSLVDNPNT-CIIDASTAY   83 (310)
T ss_pred             ----------H--------HHHHHHHHHHhCCC-EEEECChHH
Confidence                      1        13345555555565 588778764

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.79  E-value=0.086  Score=46.31  Aligned_cols=73  Identities=19%  Similarity=0.176  Sum_probs=48.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch---HHHHHh-cCccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAV-EGCKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~-~~~d~v   84 (331)
                      ..+|+|.|++|-+|..+++.+...|. +|++++++......+..+      ++..+ .+..+..   .+.... +++|.|
T Consensus       140 ~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~------g~~~v-~~~~~~~~~~~~~~~~~~~vd~v  211 (329)
T cd08250         140 GETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSL------GCDRP-INYKTEDLGEVLKKEYPKGVDVV  211 (329)
T ss_pred             CCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHc------CCceE-EeCCCccHHHHHHHhcCCCCeEE
Confidence            46899999999999999999999999 999988776555554433      22111 2222221   222222 358999


Q ss_pred             EEccc
Q 020110           85 FHVAS   89 (331)
Q Consensus        85 ih~a~   89 (331)
                      +++.+
T Consensus       212 ~~~~g  216 (329)
T cd08250         212 YESVG  216 (329)
T ss_pred             EECCc
Confidence            98765

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=95.78  E-value=0.028  Score=48.93  Aligned_cols=39  Identities=21%  Similarity=0.298  Sum_probs=32.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~   50 (331)
                      |+|+|.|+ |-+|+.++..|.+.|+ +|+.++|+......+
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~   39 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGH-DVTLVARRGAHLDAL   39 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-eEEEEECChHHHHHH
Confidence            37999997 9999999999999999 999999865443333

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=95.76  E-value=0.072  Score=45.38  Aligned_cols=32  Identities=31%  Similarity=0.411  Sum_probs=26.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEe
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATV   41 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~   41 (331)
                      |++|.|+|++|.+|+.+++.+.+. +. ++++..
T Consensus         1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~-elvav~   33 (266)
T TIGR00036         1 TIKVAVAGAAGRMGRELIKAALAAEGL-QLVAAF   33 (266)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEE
Confidence            358999999999999999999874 67 766654

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.76  E-value=0.051  Score=42.04  Aligned_cols=68  Identities=13%  Similarity=0.126  Sum_probs=44.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..|+++|+|= |.+|+.+++.|...|. +|++..++|-..-.....      ++++.        .+.+++..+|+||.+
T Consensus        22 ~Gk~vvV~GY-G~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~d------Gf~v~--------~~~~a~~~adi~vta   85 (162)
T PF00670_consen   22 AGKRVVVIGY-GKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMD------GFEVM--------TLEEALRDADIFVTA   85 (162)
T ss_dssp             TTSEEEEE---SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHT------T-EEE---------HHHHTTT-SEEEE-
T ss_pred             CCCEEEEeCC-CcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhc------CcEec--------CHHHHHhhCCEEEEC
Confidence            4579999996 9999999999999999 999998776432222111      34332        366788899999987


Q ss_pred             ccCC
Q 020110           88 ASPC   91 (331)
Q Consensus        88 a~~~   91 (331)
                      .|..
T Consensus        86 TG~~   89 (162)
T PF00670_consen   86 TGNK   89 (162)
T ss_dssp             SSSS
T ss_pred             CCCc
Confidence            6653

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK10537 voltage-gated potassium channel; Provisional

Probab=95.74  E-value=0.034  Score=50.06  Aligned_cols=68  Identities=13%  Similarity=0.210  Sum_probs=51.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~   87 (331)
                      .+|+|+|. |-+|+.+++.|.++|. +|++++.+..  ....+  .    +..++.||.+|++.++++ ++++++||-+
T Consensus       241 ~HvII~G~-g~lg~~v~~~L~~~g~-~vvVId~d~~--~~~~~--~----g~~vI~GD~td~e~L~~AgI~~A~aVI~~  309 (393)
T PRK10537        241 DHFIICGH-SPLAINTYLGLRQRGQ-AVTVIVPLGL--EHRLP--D----DADLIPGDSSDSAVLKKAGAARARAILAL  309 (393)
T ss_pred             CeEEEECC-ChHHHHHHHHHHHCCC-CEEEEECchh--hhhcc--C----CCcEEEeCCCCHHHHHhcCcccCCEEEEc
Confidence            47999997 8899999999999998 8877765421  11111  1    677999999999888755 5778988854

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=95.74  E-value=0.024  Score=49.26  Aligned_cols=67  Identities=12%  Similarity=0.085  Sum_probs=47.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |+|.|+|. |-+|+.+++.|.+.|+ +|++.+|++.....+.+.      ++..    ..+.+++.+.++++|+|+-+.
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~------g~~~----~~s~~~~~~~~~~~dvIi~~v   67 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKED------RTTG----VANLRELSQRLSAPRVVWVMV   67 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc------CCcc----cCCHHHHHhhcCCCCEEEEEc
Confidence            37999995 9999999999999999 999999987665544432      1111    123445555566789888764

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=95.74  E-value=0.025  Score=48.91  Aligned_cols=74  Identities=18%  Similarity=0.166  Sum_probs=52.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEE-----ccCCCchHHHHHhcCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE-----ADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~~~~~~~~~~~~~d~   83 (331)
                      |++|.|.|+ |--|++|+..|.++|| +|+.-.|++.....+.....    +.++..     .++.-..++.++++++|+
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~-~V~lw~r~~~~~~~i~~~~~----N~~yLp~i~lp~~l~at~Dl~~a~~~ad~   74 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGH-EVRLWGRDEEIVAEINETRE----NPKYLPGILLPPNLKATTDLAEALDGADI   74 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCC-eeEEEecCHHHHHHHHhcCc----CccccCCccCCcccccccCHHHHHhcCCE
Confidence            468999998 8889999999999999 99999998665544443211    333333     222223567888889999


Q ss_pred             EEEcc
Q 020110           84 VFHVA   88 (331)
Q Consensus        84 vih~a   88 (331)
                      |+-..
T Consensus        75 iv~av   79 (329)
T COG0240          75 IVIAV   79 (329)
T ss_pred             EEEEC
Confidence            88643

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.74  E-value=0.021  Score=50.27  Aligned_cols=76  Identities=22%  Similarity=0.184  Sum_probs=48.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      ..+|||+||+|-+|+..++.+...|. .+++.+.+..+...+.++....  -+.+...|+  .+.+.++..  ++|+|+.
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~--vi~y~~~~~--~~~v~~~t~g~gvDvv~D  217 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADH--VINYREEDF--VEQVRELTGGKGVDVVLD  217 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCE--EEcCCcccH--HHHHHHHcCCCCceEEEE
Confidence            56899999999999999999999997 6666655554444444442110  111111221  233444443  5899999


Q ss_pred             ccc
Q 020110           87 VAS   89 (331)
Q Consensus        87 ~a~   89 (331)
                      ..+
T Consensus       218 ~vG  220 (326)
T COG0604         218 TVG  220 (326)
T ss_pred             CCC
Confidence            866

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.73  E-value=0.0084  Score=42.26  Aligned_cols=66  Identities=14%  Similarity=0.150  Sum_probs=44.7

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCC---CCEEEEE-ecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNN---YTSINAT-VFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g---~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ||.|.| +|-+|++|++.|++.|   + +|... +|++.....+.+..     ++.+...      +..++++++|+||-
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~-----~~~~~~~------~~~~~~~~advvil   67 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEY-----GVQATAD------DNEEAAQEADVVIL   67 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHC-----TTEEESE------EHHHHHHHTSEEEE
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhh-----ccccccC------ChHHhhccCCEEEE
Confidence            577785 5999999999999999   8 99855 88877666654422     2222211      23456668899997


Q ss_pred             ccc
Q 020110           87 VAS   89 (331)
Q Consensus        87 ~a~   89 (331)
                      +.-
T Consensus        68 av~   70 (96)
T PF03807_consen   68 AVK   70 (96)
T ss_dssp             -S-
T ss_pred             EEC
Confidence            753

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=95.72  E-value=0.059  Score=45.88  Aligned_cols=67  Identities=18%  Similarity=0.176  Sum_probs=42.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC--CCCEEE-EEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN--NYTSIN-ATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      |++|.|.|. |.+|+.+++.|.+.  ++ ++. +.+|++.....+.+..     +..       -.+++.+++.++|+|+
T Consensus         1 mmrIgIIG~-G~iG~~ia~~l~~~~~~~-elv~v~d~~~~~a~~~a~~~-----~~~-------~~~~~~ell~~~DvVv   66 (265)
T PRK13304          1 MLKIGIVGC-GAIASLITKAILSGRINA-ELYAFYDRNLEKAENLASKT-----GAK-------ACLSIDELVEDVDLVV   66 (265)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHcCCCCe-EEEEEECCCHHHHHHHHHhc-----CCe-------eECCHHHHhcCCCEEE
Confidence            468999995 99999999999886  45 544 4445443322221110     111       1234555567899999


Q ss_pred             Eccc
Q 020110           86 HVAS   89 (331)
Q Consensus        86 h~a~   89 (331)
                      .++.
T Consensus        67 i~a~   70 (265)
T PRK13304         67 ECAS   70 (265)
T ss_pred             EcCC
Confidence            9874

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=95.71  E-value=0.15  Score=47.07  Aligned_cols=42  Identities=10%  Similarity=0.167  Sum_probs=35.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA   52 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~   52 (331)
                      |.+|.|.|. |-+|+.+++.|++.|+ +|.+.+|++.....+.+
T Consensus         1 ~~~IgvIGL-G~MG~~lA~nL~~~G~-~V~v~dr~~~~~~~l~~   42 (470)
T PTZ00142          1 MSDIGLIGL-AVMGQNLALNIASRGF-KISVYNRTYEKTEEFVK   42 (470)
T ss_pred             CCEEEEEeE-hHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH
Confidence            458999996 9999999999999999 99999998776555443

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=95.69  E-value=0.42  Score=41.02  Aligned_cols=89  Identities=17%  Similarity=0.166  Sum_probs=58.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vih~   87 (331)
                      .+|+|-|-||.+|+.+.+.|+..|. .+++-. ++....  .        .+    ..+.-..++.++.+.  +|.++-+
T Consensus         7 ~~~~~~g~~~~~~~~~~~~~~~~g~-~~v~~V-~p~~~~--~--------~v----~G~~~y~sv~dlp~~~~~Dlavi~   70 (286)
T TIGR01019         7 TKVIVQGITGSQGSFHTEQMLAYGT-NIVGGV-TPGKGG--T--------TV----LGLPVFDSVKEAVEETGANASVIF   70 (286)
T ss_pred             CcEEEecCCcHHHHHHHHHHHhCCC-CEEEEE-CCCCCc--c--------ee----cCeeccCCHHHHhhccCCCEEEEe
Confidence            4899999999999999999999998 544432 443100  0        11    222233456666655  7888866


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      ...          .        .+...++.|.+.|++.+|.+|+.
T Consensus        71 vpa----------~--------~v~~~l~e~~~~Gvk~avIis~G   97 (286)
T TIGR01019        71 VPA----------P--------FAADAIFEAIDAGIELIVCITEG   97 (286)
T ss_pred             cCH----------H--------HHHHHHHHHHHCCCCEEEEECCC
Confidence            432          1        23357777778899998888863

ATP citrate lyases appear to form an outgroup.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.68  E-value=0.028  Score=48.22  Aligned_cols=78  Identities=17%  Similarity=0.237  Sum_probs=50.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC-CCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      +.++++|.|+ |..|++++..|.+.|..+|+++.|+..+...+.+... ..+ .......+   ...+...+.++|.|||
T Consensus       126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~-~~~~~~~~---~~~~~~~~~~~divIN  200 (283)
T PRK14027        126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG-REAVVGVD---ARGIEDVIAAADGVVN  200 (283)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccC-cceEEecC---HhHHHHHHhhcCEEEE
Confidence            3578999998 9999999999999997589999997665544433211 000 10011122   2223334567899999


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      +...
T Consensus       201 aTp~  204 (283)
T PRK14027        201 ATPM  204 (283)
T ss_pred             cCCC
Confidence            8754

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.65  E-value=0.0077  Score=46.88  Aligned_cols=74  Identities=16%  Similarity=0.148  Sum_probs=46.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--C-CCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--A-GDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ||.|.|| |-.|++++..|.++|+ +|+...|++.....+.+...  . .. ++..- ..+.-..+++++++++|+||-.
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~-~~~l~-~~i~~t~dl~~a~~~ad~Iiia   76 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLP-GIKLP-ENIKATTDLEEALEDADIIIIA   76 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTST-TSBEE-TTEEEESSHHHHHTT-SEEEE-
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCC-CcccC-cccccccCHHHHhCcccEEEec
Confidence            6899998 9999999999999999 99999997644333332111  0 00 11111 1111124566788999999865


Q ss_pred             c
Q 020110           88 A   88 (331)
Q Consensus        88 a   88 (331)
                      .
T Consensus        77 v   77 (157)
T PF01210_consen   77 V   77 (157)
T ss_dssp             S
T ss_pred             c
Confidence            4

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	331
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		4e-49
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		9e-45
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		7e-42
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		1e-18
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		2e-18
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		6e-09
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		7e-09
4ef7_B	337	Udp-Xylose Synthase Length = 337		8e-08
3a1n_A	317	Crystal Structure Of L-Threonine Dehydrogenase From		1e-07
3a9w_A	317	Crystal Structure Of L-Threonine Bound L-Threonine		3e-07
2pk3_A	321	Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose		1e-06
1i3k_A	348	Molecular Basis For Severe Epimerase-Deficiency Gal		2e-06
1ek5_A	348	Structure Of Human Udp-Galactose 4-Epimerase In Com		3e-06
1hzj_A	348	Human Udp-Galactose 4-Epimerase: Accommodation Of U		4e-06
3ay3_A	267	Crystal Structure Of Glucuronic Acid Dehydrogeanse		5e-06
2q1w_A	333	Crystal Structure Of The Bordetella Bronchiseptica		1e-05
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		1e-05
1z74_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		2e-05
2bll_A	345	Apo-Structure Of The C-Terminal Decarboxylase Domai		2e-05
1z7b_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		2e-05
1z75_A	358	Crystal Structure Of Arna Dehydrogenase (decarboxyl		2e-05
1u9j_A	358	Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl		2e-05
1z7e_A	660	Crystal Structure Of Full Length Arna Length = 660		2e-05
1z73_A	358	Crystal Structure Of E. Coli Arna Dehydrogenase (de		4e-05
3rft_A	267	Crystal Structure Of Uronate Dehydrogenase From Agr		1e-04
1g1a_A	361	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		1e-04
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		2e-04
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		3e-04
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		3e-04
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		4e-04
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		4e-04

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  191 bits (486), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/327 (37%), Positives = 190/327 (58%), Gaps = 15/327 (4%)
Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVF 64
           + ETVCVTGA+GFIG+WLV  LL+  YT + ATV   ++     HL  LP A + +L ++
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERGYT-VRATVRDPTNVKKVKHLLDLPKA-ETHLTLW 61
Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
           +AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P ++G L ++++ A    V
Sbjct: 62  KADLADEGSFDEAIKGCTGVFHVATPMDFESK-DPENEVIKPTIEGMLGIMKSCAAAKTV 120
Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
           RR+V TSS +  V     +  V+DE+ W+D+E+C+++K   W Y VSKTLAE+AAW++A+
Sbjct: 121 RRLVFTSS-AGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179
Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-VPVKDVAKAQV 239
           ++ +D + I P   +GP +   +  S       + G++        G  V + D+  A +
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI 239
Query: 240 LLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAAKRLM 298
            LFE+P A GRY+C++      D A+ + + +PE+ +   F G     L     ++K+L 
Sbjct: 240 YLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKG-VDENLKSVCFSSKKLT 298
Query: 299 DLGLVFT-PVEDAVRETVESLKAKGFL 324
           DLG  F   +ED     V++ +AKG L
Sbjct: 299 DLGFEFKYSLEDMFTGAVDTCRAKGLL 325

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  177 bits (448), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/345 (35%), Positives = 188/345 (54%), Gaps = 30/345 (8%)
Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           MA++    ++T CV G  GF+ + LVK LL   Y ++N TV    +    SHL  L   G
Sbjct: 1   MATQHPIGKKTACVVGGTGFVASLLVKLLLQKGY-AVNTTVRDPDNQKKVSHLLELQELG 59
Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
           D  L++F AD+ D  +    + GC  VFHVA+P       DPE ++I PA+QG +NV++A
Sbjct: 60  D--LKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASE-DPENDMIKPAIQGVVNVMKA 116
Query: 118 AKRF-GVRRVVVTSSISAIVPNP-GWKGKVFDETSWTDLEYCKSRK--KW-YPVSKTLAE 172
             R   V+RV++TSS +A+  N     G V DE +WTD+E+  S K   W YP SKTLAE
Sbjct: 117 CTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAE 176
Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK----DTQEYHWL-G 227
           KAAW+FAE++ +D++ + P    G  +   + +S  +   L+ G++      +    L G
Sbjct: 177 KAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSG 236
Query: 228 AVP---VKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQ 284
           +V    V+DV +A + + E  +ASGRY+C        + A+ +SK +P++ V      T 
Sbjct: 237 SVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKV-----PTD 291
Query: 285 PGLIPCKD----AAKRLMDLGLVFT-PVEDAVRETVESLKAKGFL 324
            G  P K     ++++L+  G  F   +E+   E+VE  KAKG L
Sbjct: 292 FGDFPPKSKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLL 336

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score =  167 bits (423), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 172/323 (53%), Gaps = 14/323 (4%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNY---TSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
           VCVTG  GF+G+W++K+LL+N Y   T+I A      D S L  LPGA +  L  F AD+
Sbjct: 4   VCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASE-KLHFFNADL 62
Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGVRRVV 127
            +  + + A+EGC G+FH ASP       +PE+ +    V G L +L+A      V+R +
Sbjct: 63  SNPDSFAAAIEGCVGIFHTASPIDFA-VSEPEEIVTKRTVDGALGILKACVNSKTVKRFI 121
Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW---YPVSKTLAEKAAWEFAEKHGV 184
            TSS SA+  N G    V DE+ W+D++  +S K +   Y VSKTLAEKA  EF E++G+
Sbjct: 122 YTSSGSAVSFN-GKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGI 180
Query: 185 DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES 244
           DVV +     +G  + P L  S      L+ G K+         V V DVA+A + L E+
Sbjct: 181 DVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLEN 240
Query: 245 PAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFD--GETQPGLIPCKDAAKRLMDLGL 302
               GRY C+  I    + ++ +S  +PE+ +   D   E +   +P  +  K+L+D G 
Sbjct: 241 SVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLN-TKKLVDAGF 299
Query: 303 VFT-PVEDAVRETVESLKAKGFL 324
            F   +ED   + ++  K KG+L
Sbjct: 300 DFKYTIEDMFDDAIQCCKEKGYL 322

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 106/212 (50%), Gaps = 24/212 (11%)
Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA---GDANLRVF 64
           E   V VTGANGF+ + +V+ LL++ Y  +  T    S  ++L     A   G     V 
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVV 68
Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GV 123
           E D+L  GA    ++G  GV H+AS  +  +  D   E++ PA+ GTLN L AA     V
Sbjct: 69  E-DMLKQGAYDEVIKGAAGVAHIASVVSFSNKYD---EVVTPAIGGTLNALRAAAATPSV 124
Query: 124 RRVVVTSS-ISAIVPNPGWKGKVFDETSWTDLEYCKSRKK----------W-YPVSKTLA 171
           +R V+TSS +SA++P P  +G   DE SW +LE     K           W Y  SKT A
Sbjct: 125 KRFVLTSSTVSALIPKPNVEGIYLDEKSW-NLESIDKAKTLPESDPQKSLWVYAASKTEA 183
Query: 172 EKAAWEFAE--KHGVDVVAIHPATCLGPLMQP 201
           E AAW+F +  K    + A+ P   +G +  P
Sbjct: 184 ELAAWKFMDENKPHFTLNAVLPNYTIGTIFDP 215

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 105/212 (49%), Gaps = 24/212 (11%)
Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA---GDANLRVF 64
           E   V VTGANGF+ + +V+ LL++ Y  +  T    S  ++L     A   G     V 
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVV 68
Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GV 123
           E D L  GA    ++G  GV H+AS  +  +  D   E++ PA+ GTLN L AA     V
Sbjct: 69  E-DXLKQGAYDEVIKGAAGVAHIASVVSFSNKYD---EVVTPAIGGTLNALRAAAATPSV 124
Query: 124 RRVVVTSS-ISAIVPNPGWKGKVFDETSWTDLEYCKSRKK----------W-YPVSKTLA 171
           +R V+TSS +SA++P P  +G   DE SW +LE     K           W Y  SKT A
Sbjct: 125 KRFVLTSSTVSALIPKPNVEGIYLDEKSW-NLESIDKAKTLPESDPQKSLWVYAASKTEA 183
Query: 172 EKAAWEFAE--KHGVDVVAIHPATCLGPLMQP 201
           E AAW+F +  K    + A+ P   +G +  P
Sbjct: 184 ELAAWKFXDENKPHFTLNAVLPNYTIGTIFDP 215

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-----SHLFALPGAGDANLRVFEA 66
           + VTG  GFIG+  V+ LL   Y  + A      DS     +     P   D  LR    
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ D+G ++R + G   + H A+   ++  +          VQGT  +L+ A   GV RV
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122
Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V  S+               D  SWT+    +     Y  SK  ++  A  +   +G+DV
Sbjct: 123 VHVSTNQVY--------GSIDSGSWTESSPLEPNSP-YAASKAGSDLVARAYHRTYGLDV 173
Query: 187 VAIHPATCLGPLMQP 201
                    GP   P
Sbjct: 174 RITRCCNNYGPYQHP 188

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-----SHLFALPGAGDANLRVFEA 66
           + VTG  GFIG+  V+ LL   Y  + A      DS     +     P   D  LR    
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ D+G ++R + G   + H A+   ++  +          VQGT  +L+ A   GV RV
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122
Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V  S+               D  SWT+    +     Y  SK  ++  A  +   +G+DV
Sbjct: 123 VHVSTDEVY--------GSIDSGSWTESSPLEPNSP-YAASKAGSDLVARAYHRTYGLDV 173
Query: 187 VAIHPATCLGPLMQP 201
                    GP   P
Sbjct: 174 RITRCCNNYGPYQHP 188

>pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 116/280 (41%), Gaps = 35/280 (12%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG++G IGT LV  L +  Y   N        +S +      G   ++    DV + 
Sbjct: 2   ILVTGSSGQIGTELVPYLAEK-YGKKNVI------ASDIVQRDTGG---IKFITLDVSNR 51
Query: 72  GAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             + RAVE      +FH+A   + +   DP     +  + GT N+LEAAK+  V +VV+ 
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKV-NMNGTYNILEAAKQHRVEKVVIP 110
Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           S+I    P    K KV   T           +  Y V+K  AE     + EK G+DV ++
Sbjct: 111 STIGVFGPETP-KNKVPSIT-------ITRPRTMYGVTKIAAELLGQYYYEKFGLDVRSL 162
Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG---AVPVK---DVAKAQVLLFE 243
                +    +P    +   ++      K  +   +L    A+P+    D  KA V L+E
Sbjct: 163 RYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYE 222
Query: 244 SPAASGRYLCTNGI----YQF--GDFAERVSKLFPEFPVH 277
             A   + +  NG     Y F   +   ++ +  PEF + 
Sbjct: 223 --ADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIE 260

>pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 35/280 (12%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG++G IGT LV  L +  Y   N        +S +      G   ++    DV + 
Sbjct: 2   ILVTGSSGQIGTELVPYLAEK-YGKKNVI------ASDIVQRDTGG---IKFITLDVSNR 51
Query: 72  GAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             + RAVE      +FH+A   + +   DP     +  + GT N+LEAAK+  V +VV+ 
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKV-NMNGTYNILEAAKQHRVEKVVIP 110
Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           S+I    P    K KV   T           +  + V+K  AE     + EK G+DV ++
Sbjct: 111 STIGVFGPETP-KNKVPSIT-------ITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSL 162
Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG---AVPVK---DVAKAQVLLFE 243
                +    +P    +   ++      K  +   +L    A+P+    D  KA V L+E
Sbjct: 163 RYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYE 222
Query: 244 SPAASGRYLCTNGI----YQF--GDFAERVSKLFPEFPVH 277
             A   + +  NG     Y F   +   ++ +  PEF + 
Sbjct: 223 --ADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIE 260

>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 19/187 (10%)
Query: 13  CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG 72
            +TG  GF+G +L      N+ T  N  VF G+  ++   LP     N+ +   D++DS 
Sbjct: 16  LITGVAGFVGKYLA-----NHLTEQNVEVF-GTSRNNEAKLP-----NVEMISLDIMDSQ 64
Query: 73  AVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
            V + +   K   +FH+A+  +++D    +K      V GTL+VL+A +   +   ++T 
Sbjct: 65  RVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILT- 123
Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
                + +    G +  E S    E        Y VSK      A ++ + +G+D++   
Sbjct: 124 -----IGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTR 178
Query: 191 PATCLGP 197
               +GP
Sbjct: 179 TFNHIGP 185

>pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSI------NATVFPGSDSSHLFALPGAGDANLRV 63
           E V VTG  G+IG+  V  LL+  Y  +      NA    GS    L  +      ++  
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 64  FEADVLDSGAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
            E D+LD GA+ R  +      V H A    + + V    +     + GT+ +LE  K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 122 GVRRVVVTSSISAI----------------VPNPGWKGKVFDETSWTDLEYCKSRKKW 163
           GV+ +V +SS +                    NP  K K F E    DL  C++ K W
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL--CQADKTW 178

>pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 72/181 (39%), Gaps = 26/181 (14%)
Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSI------NATVFPGSDSSHLFALPGAGDANLRV 63
           E V VTG  G+IG+  V  LL+  Y  +      NA    GS    L  +      ++  
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 64  FEADVLDSGAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
            E D+LD GA+ R  +      V H A    + + V    +     + GT+ +LE  K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 122 GVRRVVVTSSISAI----------------VPNPGWKGKVFDETSWTDLEYCKSRKKWYP 165
           GV+ +V +SS +                    NP  K K F E    DL  C++ K W  
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL--CQADKTWNA 180
Query: 166 V 166
           V
Sbjct: 181 V 181

>pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSI------NATVFPGSDSSHLFALPGAGDANLRV 63
           E V VTG  G+IG+  V  LL+  Y  +      NA    GS    L  +      ++  
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 64  FEADVLDSGAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
            E D+LD GA+ R  +      V H A    + + V    +     + GT+ +LE  K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 122 GVRRVVVTSSISAI----------------VPNPGWKGKVFDETSWTDLEYCKSRKKW 163
           GV+ +V +SS +                    NP  K K F E    DL  C++ K W
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL--CQADKTW 178

>pdb|3AY3|A Chain A, Crystal Structure Of Glucuronic Acid Dehydrogeanse From Chromohalobacter Salexigens Length = 267

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 55  GAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNV 114
           GA +A+  +   D+ D+ AV   V+ C G+ H+    ++E P +   +++   + G  N+
Sbjct: 38  GAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGG-VSVERPWN---DILQANIIGAYNL 93
Query: 115 LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
            EAA+  G  R+V  SS   I   P         T+  D E  +     Y +SK   E  
Sbjct: 94  YEAARNLGKPRIVFASSNHTIGYYP--------RTTRIDTEVPRRPDSLYGLSKCFGEDL 145
Query: 175 AWEFAEKHGVDVVAIHPATCL 195
           A  +  K  ++ + I   +C 
Sbjct: 146 ASLYYHKFDIETLNIRIGSCF 166

>pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 128/328 (39%), Gaps = 35/328 (10%)
Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
           + V +TG  G IG+ + + LL+     +    F      HL   P     NL   E  + 
Sbjct: 22  KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHP-----NLTFVEGSIA 76
Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           D   V++ +   +    V +  + +DP D   + +   V G+ NV++AAK+  V R V  
Sbjct: 77  DHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGS-NVVQAAKKNNVGRFVYF 135
Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
            +       P  +    D                Y +SK+  E    ++ E  G+D V  
Sbjct: 136 QTALCYGVKPIQQPVRLDHPR-------NPANSSYAISKSANE----DYLEYSGLDFVTF 184
Query: 190 HPATCLGPLMQPYLNASCAV---LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
             A  +GP      N S  +    Q+L +G K          V VKD+A+A V   +   
Sbjct: 185 RLANVVGP-----RNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDG-V 238
Query: 247 ASGRYLCTNG----IYQFGDFAERVSKL--FPEFPVHRFDGETQPGLIPCKDAAKRLMDL 300
             G Y  ++G    I +  D       L  +PE  +     +  P ++   D ++ + D 
Sbjct: 239 GHGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSIL--LDPSRTIQDF 296
Query: 301 GLV-FTPVEDAVRETVESLKAKGFLGQH 327
           G + FTP+++ V   V   +  G  G +
Sbjct: 297 GKIEFTPLKETVAAAVAYFREYGVSGGY 324

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 16/194 (8%)
Query: 6   EKEEETVCVTGANGFIGTWLVKTL-LDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF 64
           EK+ + + +TG  GF+G+ L   L  D +  ++    F G   +    +   G  N  + 
Sbjct: 24  EKDRKRILITGGAGFVGSHLTDKLXXDGHEVTVVDNFFTGRKRNVEHWI---GHENFELI 80
Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLED-PVDPEKELILPAVQGTLNVLEAAKRFGV 123
             DV++   +         ++H+ASP +  +   +P K L    + GTLN L  AKR G 
Sbjct: 81  NHDVVEPLYIE-----VDQIYHLASPASPPNYXYNPIKTLKTNTI-GTLNXLGLAKRVGA 134
Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           R  ++ +S S +  +P    +   E  W  +     R   Y   K +AE   + + ++ G
Sbjct: 135 R--LLLASTSEVYGDPEVHPQ--SEDYWGHVNPIGPR-ACYDEGKRVAETXCYAYXKQEG 189
Query: 184 VDVVAIHPATCLGP 197
           V+V         GP
Sbjct: 190 VEVRVARIFNTFGP 203

>pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 19/217 (8%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKYRKR 124
Query: 125 RVV-VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKH 182
            +   TS +  +  +     K FDE     +    ++ +W Y VSK L ++  W + EK 
Sbjct: 125 IIFPSTSEVYGMCSD-----KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE 179
Query: 183 GVDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           G+      P   +GP    L    + +S A+ Q +L 
Sbjct: 180 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 19/212 (8%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV-LD 70
           V + G NGFIG  L + LL  ++  +      GSD+   F        +    E D+ + 
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEGDISIH 57
Query: 71  SGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV-V 128
           S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R +   
Sbjct: 58  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKYRKRIIFPS 116
Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHGVDVV 187
           TS +  +  +     K FDE     +    ++ +W Y VSK L ++  W + EK G+   
Sbjct: 117 TSEVYGMCSD-----KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFT 171
Query: 188 AIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
              P   +GP    L    + +S A+ Q +L 
Sbjct: 172 LFRPFNWMGPRLDNLNAARIGSSRAITQLILN 203

>pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 19/217 (8%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKYRKR 124
Query: 125 RVV-VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKH 182
            +   TS +  +  +     K FDE     +    ++ +W Y VSK L ++  W + EK 
Sbjct: 125 IIFPSTSEVYGMCSD-----KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE 179
Query: 183 GVDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           G+      P   +GP    L    + +S A+ Q +L 
Sbjct: 180 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 19/217 (8%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKYRKR 124
Query: 125 RVV-VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKH 182
            +   TS +  +  +     K FDE     +    ++ +W Y VSK L ++  W + EK 
Sbjct: 125 IIFPSTSEVYGMCSD-----KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE 179
Query: 183 GVDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           G+      P   +GP    L    + +S A+ Q +L 
Sbjct: 180 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 19/217 (8%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKYRKR 124
Query: 125 RVV-VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKH 182
            +   TS +  +  +     K FDE     +    ++ +W Y VSK L ++  W + EK 
Sbjct: 125 IIFPSTSEVYGMCSD-----KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE 179
Query: 183 GVDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           G+      P   +GP    L    + +S A+ Q +L 
Sbjct: 180 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 367
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 368 DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELD-FEENLRIIRYCVKY--R 424
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 425 KRIIFPSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 482
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 483 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 518

>pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 19/217 (8%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKYRKR 124
Query: 125 RVV-VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKH 182
            +   T+ +  +  +     K FDE     +    ++ +W Y VSK L ++  W + EK 
Sbjct: 125 IIFPSTAEVYGMCSD-----KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE 179
Query: 183 GVDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           G+      P   +GP    L    + +S A+ Q +L 
Sbjct: 180 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|3RFT|A Chain A, Crystal Structure Of Uronate Dehydrogenase From Agrobacterium Tumefaciens Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 60  NLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
           N    + D+ D+ AV+  V GC G+ H+    ++E P +   +++   + G  N+ EAA+
Sbjct: 44  NEECVQCDLADANAVNAMVAGCDGIVHLGG-ISVEKPFE---QILQGNIIGLYNLYEAAR 99
Query: 120 RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA 179
             G  R+V  SS   I          + +T     +        Y VSK   E  A  + 
Sbjct: 100 AHGQPRIVFASSNHTI--------GYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYF 151
Query: 180 EKHGVDVVAIHPATC 194
           +K G +   +   +C
Sbjct: 152 DKFGQETALVRIGSC 166

>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 12  VCVTGANGFIGTWLVKTLLDN---NYTSINATVFPGSDSSHLFALPGAGDANLRVFE-AD 67
           + +TG  GFIG+ +V+ ++ N      +I+   + G+    L +L    ++N   FE AD
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN----LESLSDISESNRYNFEHAD 58
Query: 68  VLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           + DS  ++R  E  +   V H+A+   ++  +      I   + GT  +LE A+++
Sbjct: 59  ICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKY 114

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ +V  L ++N   +   +  G++    F    A     R+ +AD L +
Sbjct: 4   IVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE---FVNEAA-----RLVKAD-LAA 54
Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
             +   ++G + V+H+A+   +    +   E+    V  T  +LEA ++ GV R+V TS+
Sbjct: 55  DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114
Query: 132 ISA-----IVPNP 139
            +      ++P P
Sbjct: 115 STVYGEAKVIPTP 127

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 82/205 (40%), Gaps = 54/205 (26%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ LV  L++  Y  +   +               G A L V +      
Sbjct: 3   IVVTGGAGFIGSHLVDKLVELGYEVVVVDIVQRDT---------GGSAELHVRDLKDYSW 53
Query: 72  GAVSRAVEGCKG--VFHVASP----CTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
           GA      G KG  VFH A+      +  +P+    E ++     T NVLE A++ GVR 
Sbjct: 54  GA------GIKGDVVFHFAANPEVRLSTTEPIVHFNENVV----ATFNVLEWARQTGVRT 103
Query: 126 VVVTSSISA-----IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE--- 177
           VV  SS +      ++P P                     + + P+S   A KAA E   
Sbjct: 104 VVFASSSTVYGDADVIPTP-------------------EEEPYKPISVYGAAKAAGEVMC 144
Query: 178 --FAEKHGVDVVAIHPATCLGPLMQ 200
             +A   GV  +A+  A  +GP ++
Sbjct: 145 ATYARLFGVRCLAVRYANVVGPRLR 169

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/258 (20%), Positives = 97/258 (37%), Gaps = 44/258 (17%)
Query: 4   EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRV 63
           ++E   + V VTG  G+IG+  V  L++N Y  + A     S    +  L      ++  
Sbjct: 6   QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPF 65
Query: 64  FEADVLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           +E D+ D   + +  +  K   V H A    + +            + GT+ +LE  +++
Sbjct: 66  YEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY 125
Query: 122 GVRRVVVTSSISA---------IVP----------NPGWKGKVFDETSWTDLEYCKSRKK 162
            V + V +SS +          ++P          NP    K   E    DL        
Sbjct: 126 NVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYN------ 179
Query: 163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLG--PLMQPYLNASCAVLQQLLQGSKDT 220
                   ++K +W+FA     + +  HP+  +G  PL  P  N     + Q+  G ++ 
Sbjct: 180 --------SDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIP--NNLLPYMAQVAVGRREK 229
Query: 221 -----QEYHWLGAVPVKD 233
                 +Y      P++D
Sbjct: 230 LYIFGDDYDSRDGTPIRD 247

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 22/124 (17%)
Query: 12  VCVTGANGFIGTWLVK--------TLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRV 63
           + +TG  G +G+ L++         L+ +N+ +    V P          P AG   L V
Sbjct: 23  ILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP----------PVAG---LSV 69
Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
            E  V D+G + RA +  K    V S    +DP D   E     VQG++NV +AA + GV
Sbjct: 70  IEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDP-DDWAEDAATNVQGSINVAKAASKAGV 128
Query: 124 RRVV 127
           +R++
Sbjct: 129 KRLL 132

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 84/205 (40%), Gaps = 50/205 (24%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ LV  L++  Y  +   V   S     F  P    A L V +      
Sbjct: 3   IVVTGGAGFIGSHLVDKLVELGYEVV--VVDNLSSGRREFVNP---SAELHVRDLKDYSW 57
Query: 72  GAVSRAVEGCKG--VFHVASP----CTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
           GA      G KG  VFH A+      +  +P+    E ++     T NVLE A++ GVR 
Sbjct: 58  GA------GIKGDVVFHFAANPEVRLSTTEPIVHFNENVV----ATFNVLEWARQTGVRT 107
Query: 126 VVVTSSISA-----IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE--- 177
           VV  SS +      ++P P                     + + P+S   A KAA E   
Sbjct: 108 VVFASSSTVYGDADVIPTP-------------------EEEPYKPISVYGAAKAAGEVMC 148
Query: 178 --FAEKHGVDVVAIHPATCLGPLMQ 200
             +A   GV  +A+  A  +GP ++
Sbjct: 149 ATYARLFGVRCLAVRYANVVGPRLR 173

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	331
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-139
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-139
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-138
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	1e-108
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-69
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	6e-58
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	7e-32
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-30
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	1e-29
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	3e-25
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	4e-24
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	5e-23
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	7e-23
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-22
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	4e-22
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	5e-21
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	7e-21
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-20
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	6e-20
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	6e-20
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	3e-19
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	6e-18
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	7e-18
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	7e-18
1xq6_A	253	Unknown protein; structural genomics, protein stru	3e-17
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	2e-16
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-15
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	1e-15
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-15
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	2e-15
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-15
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-15
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-15
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	4e-15
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	9e-15
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	2e-13
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	2e-13
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-13
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	6e-13
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	2e-12
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	6e-11
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	7e-11
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	7e-10
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	5e-09
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	7e-09
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	7e-09
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-08
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	3e-08
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	1e-07
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	2e-07
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-07
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	3e-07
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	4e-07
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	7e-07
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	8e-07
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-06
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	2e-06
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-06
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	9e-06
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	1e-05
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	1e-05
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	2e-05
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	3e-05
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	5e-05
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	8e-05
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	1e-04
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	2e-04
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	2e-04
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-04
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	3e-04
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	9e-04

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  397 bits (1022), Expect = e-139
 Identities = 116/341 (34%), Positives = 181/341 (53%), Gaps = 22/341 (6%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           MA++    ++T CV G  GF+ + LVK LL   Y  +N TV    +    SHL  L   G
Sbjct: 1   MATQHPIGKKTACVVGGTGFVASLLVKLLLQKGYA-VNTTVRDPDNQKKVSHLLELQELG 59

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
             +L++F AD+ D  +    + GC  VFHVA+P       DPE ++I PA+QG +NV++A
Sbjct: 60  --DLKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASE-DPENDMIKPAIQGVVNVMKA 116

Query: 118 AKRF-GVRRVVVTSSISAIVPNPGWK-GKVFDETSWTDLEYCKSRKK---WYPVSKTLAE 172
             R   V+RV++TSS +A+  N     G V DE +WTD+E+  S K     YP SKTLAE
Sbjct: 117 CTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAE 176

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH-------- 224
           KAAW+FAE++ +D++ + P    G  +   + +S  +   L+ G++              
Sbjct: 177 KAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSG 236

Query: 225 WLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQ 284
            +    V+DV +A + + E  +ASGRY+C        + A+ +SK +P++ V    G+  
Sbjct: 237 SVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFP 296

Query: 285 PGLIPCKDAAKRLMDLGLVFT-PVEDAVRETVESLKAKGFL 324
           P       ++++L+  G  F   +E+   E+VE  KAKG L
Sbjct: 297 PK-SKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLL 336

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  396 bits (1019), Expect = e-139
 Identities = 118/333 (35%), Positives = 187/333 (56%), Gaps = 17/333 (5%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           M S++E    TVCVTGA+GFIG+WLV  LL+  YT + ATV   ++     HL  LP A 
Sbjct: 1   MGSQSE----TVCVTGASGFIGSWLVMRLLERGYT-VRATVRDPTNVKKVKHLLDLPKAE 55

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
             +L +++AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P ++G L ++++
Sbjct: 56  T-HLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESK-DPENEVIKPTIEGMLGIMKS 113

Query: 118 AKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK---WYPVSKTLAEK 173
                 VRR+V TSS   +      +  V+DE+ W+D+E+C+++K     Y VSKTLAE+
Sbjct: 114 CAAAKTVRRLVFTSSAGTVNIQEH-QLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQ 172

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-VPVK 232
           AAW++A+++ +D + I P   +GP +   +  S       + G++        G  V + 
Sbjct: 173 AAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLD 232

Query: 233 DVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKD 292
           D+  A + LFE+P A GRY+C++      D A+ + + +PE+ +          L     
Sbjct: 233 DLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCF 292

Query: 293 AAKRLMDLGLVFT-PVEDAVRETVESLKAKGFL 324
           ++K+L DLG  F   +ED     V++ +AKG L
Sbjct: 293 SSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLL 325

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  392 bits (1010), Expect = e-138
 Identities = 111/325 (34%), Positives = 169/325 (52%), Gaps = 14/325 (4%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS----SHLFALPGAGDANLRVFE 65
             VCVTG  GF+G+W++K+LL+N Y+ +N T+    +     S L  LPGA +  L  F 
Sbjct: 2   GRVCVTGGTGFLGSWIIKSLLENGYS-VNTTIRADPERKRDVSFLTNLPGASE-KLHFFN 59

Query: 66  ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR 124
           AD+ +  + + A+EGC G+FH ASP       +PE+ +    V G L +L+A      V+
Sbjct: 60  ADLSNPDSFAAAIEGCVGIFHTASPIDFAVS-EPEEIVTKRTVDGALGILKACVNSKTVK 118

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW---YPVSKTLAEKAAWEFAEK 181
           R + TSS SA+  N      V DE+ W+D++  +S K +   Y VSKTLAEKA  EF E+
Sbjct: 119 RFIYTSSGSAVSFNG-KDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ 177

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL 241
           +G+DVV +     +G  + P L  S      L+ G K+         V V DVA+A + L
Sbjct: 178 NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYL 237

Query: 242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQ-PGLIPCKDAAKRLMDL 300
            E+    GRY C+  I    + ++ +S  +PE+ +   D   +  G        K+L+D 
Sbjct: 238 LENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDA 297

Query: 301 GLVFT-PVEDAVRETVESLKAKGFL 324
           G  F   +ED   + ++  K KG+L
Sbjct: 298 GFDFKYTIEDMFDDAIQCCKEKGYL 322

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  318 bits (816), Expect = e-108
 Identities = 83/345 (24%), Positives = 135/345 (39%), Gaps = 30/345 (8%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           + +    E   V VTGANGF+ + +V+ LL++ Y  +  T    S        +     G
Sbjct: 3   IDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYK-VRGTARSASKLANLQKRWDAKYPG 61

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
                    D+L  GA    ++G  GV H+AS  +     +   E++ PA+ GTLN L A
Sbjct: 62  R-FETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFS---NKYDEVVTPAIGGTLNALRA 117

Query: 118 AKRFG-VRRVVVTSSISAIV-PNPGWKGKVFDETSWTDLEYCKSRKK----------WYP 165
           A     V+R V+TSS  + + P P  +G   DE SW      K++             Y 
Sbjct: 118 AAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYA 177

Query: 166 VSKTLAEKAAWEFAEKHGV--DVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKDTQ 221
            SKT AE AAW+F +++     + A+ P   +G +  P     ++   +  L  G     
Sbjct: 178 ASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA 237

Query: 222 EYHWLGA--VPVKDVAKAQVLLFESPAASG-RYLCTNGIYQFGDFAERVSKLFPEFPVHR 278
                    V   D+    +     P     R   T G + +        KL+P      
Sbjct: 238 LALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPA 297

Query: 279 FDGETQPGL--IPCKDAAKRLMDLGLV-FTPVEDAVRETVESLKA 320
              +    L       + + L  LG   +  +E+++++ V S  A
Sbjct: 298 DFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSETA 342

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  219 bits (559), Expect = 2e-69
 Identities = 65/344 (18%), Positives = 114/344 (33%), Gaps = 50/344 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
             V GA G +G    + +    +  +     P S    L  L            A++LD 
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHD-LVLIHRPSSQIQRLAYLE------PECRVAEMLDH 68

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
             + RA+ G  GV   A       P   + E +  A+  T     A  +  V R++   S
Sbjct: 69  AGLERALRGLDGVIFSAGYYPS-RPRRWQ-EEVASALGQTNPFYAACLQARVPRILYVGS 126

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
             A+  +P  +G    E  + D     S K  Y + K   ++ A E A ++G+ VV   P
Sbjct: 127 AYAMPRHP--QGLPGHEGLFYD--SLPSGKSSYVLCKWALDEQAREQA-RNGLPVVIGIP 181

Query: 192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRY 251
              LG L       +  V+  +  G            +   +  +  ++  E      RY
Sbjct: 182 GMVLGEL--DIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERY 239

Query: 252 LCTNGIYQFGDFAERVSKLF--------PEFPV----------HRFDGETQPGLIPCKDA 293
           L T    +  D   R+++L                        +R  G   P L   + A
Sbjct: 240 LLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSG-QLPLL--DETA 296

Query: 294 AKRLM------------DLGLV-FTPVEDAVRETVESLKAKGFL 324
            + +             +LG    T ++D +   ++  +  G+ 
Sbjct: 297 IEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYF 340

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  185 bits (472), Expect = 6e-58
 Identities = 42/245 (17%), Positives = 88/245 (35%), Gaps = 36/245 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + GA+GF+G+ L+   L+  +  + A V           +    + +L+V +ADV  
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFE-VTAVVRHPEK------IKIENE-HLKVKKADVSS 57

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              V    +G   V    +P           ++    ++  L +++  K+ GV R ++  
Sbjct: 58  LDEVCEVCKGADAVISAFNP------GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVG 111

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
              ++   PG +           ++  +  +   P  K L E       ++  +D V   
Sbjct: 112 GAGSLFIAPGLRL----------MDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS 161

Query: 191 PATCLGPLMQP--YLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
           PA  + P ++   Y      ++  ++  S           + V+D A A +   E P   
Sbjct: 162 PAADMRPGVRTGRYRLGKDDMIVDIVGNSH----------ISVEDYAAAMIDELEHPKHH 211

Query: 249 GRYLC 253
                
Sbjct: 212 QERFT 216

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  120 bits (303), Expect = 7e-32
 Identities = 70/344 (20%), Positives = 128/344 (37%), Gaps = 56/344 (16%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG++G IGT LV  L +            G  +     +       ++    DV + 
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKY----------GKKNVIASDIVQRDTGGIKFITLDVSNR 51

Query: 72  GAVSRAVE--GCKGVFHVA---SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
             + RAVE      +FH+A   S    +DP    K  +     GT N+LEAAK+  V +V
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNM----NGTYNILEAAKQHRVEKV 107

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V+ S+I    P            + T           + V+K  AE     + EK G+DV
Sbjct: 108 VIPSTIGVFGPET--PKNKVPSITITRPRT------MFGVTKIAAELLGQYYYEKFGLDV 159

Query: 187 VAIHPATCLGPLMQPYLNASC---AVLQQLLQGSK-----DTQEYHWLGAVPVKDVAKAQ 238
            ++     +    +P    +     +    ++  K            +  + + D  KA 
Sbjct: 160 RSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPM--MYMPDALKAL 217

Query: 239 VLLFESPAASGR----YLCTNGIYQFGDFAERVSKLFPEFPVHRFD------GETQPGLI 288
           V L+E+          Y  T   +   +   ++ +  PEF +   +        T P  +
Sbjct: 218 VDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESL 277

Query: 289 PCKDAAKRLMDLGLVFTP---VEDAVRETVESLKAK-GFLGQHV 328
              D+++   + G  F+    ++  + + ++ +  K G  G+H 
Sbjct: 278 ---DSSEASNEWG--FSIEYDLDRTIDDMIDHISEKLGIEGKHA 316

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  115 bits (289), Expect = 2e-30
 Identities = 41/191 (21%), Positives = 68/191 (35%), Gaps = 28/191 (14%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
             + VTGA G +G+ +   L    +    + +             GA +A+  +   D+ 
Sbjct: 3   NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVD----------LGAAEAHEEIVACDLA 52

Query: 70  DSGAVSRAVEGCKGVFHVA---SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ AV   V+ C G+ H+          D +          + G  N+ EAA+  G  R+
Sbjct: 53  DAQAVHDLVKDCDGIIHLGGVSVERPWNDILQAN-------IIGAYNLYEAARNLGKPRI 105

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V  SS   I   P  +    D           S    Y +SK   E  A  +  K  ++ 
Sbjct: 106 VFASSNHTIGYYP--RTTRIDTEVPRR---PDSL---YGLSKCFGEDLASLYYHKFDIET 157

Query: 187 VAIHPATCLGP 197
           + I   +C   
Sbjct: 158 LNIRIGSCFPK 168

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  113 bits (284), Expect = 1e-29
 Identities = 46/188 (24%), Positives = 70/188 (37%), Gaps = 24/188 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + VTGA G +G  + + L                  + L  L  AG  N    + D+ D
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRL---------ADLSPLDPAGP-NEECVQCDLAD 54

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPA-VQGTLNVLEAAKRFGVRRVVVT 129
           + AV+  V GC G+ H+         V+   E IL   + G  N+ EAA+  G  R+V  
Sbjct: 55  ANAVNAMVAGCDGIVHLGG-----ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFA 109

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           SS   I   P  + +          +        Y VSK   E  A  + +K G +   +
Sbjct: 110 SSNHTIGYYP--QTERLGPDVPARPDGL------YGVSKCFGENLARMYFDKFGQETALV 161

Query: 190 HPATCLGP 197
              +C   
Sbjct: 162 RIGSCTPE 169

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  102 bits (256), Expect = 3e-25
 Identities = 51/329 (15%), Positives = 107/329 (32%), Gaps = 60/329 (18%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GF+G ++V+++ ++  T I          S    +      +     +D    
Sbjct: 5   IAVTGGTGFLGQYVVESIKNDGNTPI------ILTRS----IGNKAINDYEYRVSDYTLE 54

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPV-DPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             +   +     V H+A+    +  + +            T N+ +A     +  +V  S
Sbjct: 55  DLI-NQLNDVDAVVHLAATRGSQGKISEFHDN-----EILTQNLYDACYENNISNIVYAS 108

Query: 131 SISA-----IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
           +ISA      +P        ++E      +        Y VSK   E     ++ K G+ 
Sbjct: 109 TISAYSDETSLP--------WNEKELPLPDLM------YGVSKLACEHIGNIYSRKKGLC 154

Query: 186 VVAIHPATCLGPLMQPYLNASCAV---LQQLLQGSK-----D-TQEYHWLGAVPVKDVAK 236
           +  +  A   G   +     +  +    +Q   G +     +   +  +   +  KD AK
Sbjct: 155 IKNLRFAHLYGFNEKN----NYMINRFFRQAFHGEQLTLHANSVAKREF---LYAKDAAK 207

Query: 237 AQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIP--CKDA 293
           + +   +    SG + + +       + A  ++  F                I     D+
Sbjct: 208 SVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDS 267

Query: 294 AKRLMDLGLVFTP---VEDAVRETVESLK 319
           +K    L   F+       AV E    ++
Sbjct: 268 SKAKELLD--FSTDYNFATAVEEIHLLMR 294

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  100 bits (250), Expect = 4e-24
 Identities = 66/354 (18%), Positives = 123/354 (34%), Gaps = 65/354 (18%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSI---N-ATVFPGSDSSHLFALPGA 56
           +  E   + +   +TG  GFIG+ L++TLL  +   +   N AT    +       +   
Sbjct: 19  LRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK 78

Query: 57  GDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTL 112
             +N +  + D+ +    + A  G   V H A+    P ++ DP+      I     G L
Sbjct: 79  QWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNID----GFL 134

Query: 113 NVLEAAKRFGVRRVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKKWYPV 166
           N+L AA+   V+     +S S+       +P          E +        S    Y V
Sbjct: 135 NMLIAARDAKVQSFTYAAS-SSTYGDHPGLP--------KVEDTIGK---PLSP---YAV 179

Query: 167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVL----QQLLQGS----- 217
           +K + E  A  F+  +G   + +      G    P   A  AV+      ++QG      
Sbjct: 180 TKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNG-AYAAVIPKWTSSMIQGDDVYIN 238

Query: 218 ---KDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRY-LCTNGIYQFGDFAERVSKLF 271
              + ++++       +++  +A +L   +   A +  Y +   G          +    
Sbjct: 239 GDGETSRDF-----CYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGL 293

Query: 272 PEFPVHRFD----GETQPGLIP--CKDAAKRLMDLGLVFTP---VEDAVRETVE 316
            E  V         + + G +     D +K    LG  + P   V   V   + 
Sbjct: 294 AENGVSYHREPVYRDFREGDVRHSLADISKAAKLLG--YAPKYDVSAGVALAMP 345

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 97.4 bits (243), Expect = 5e-23
 Identities = 68/346 (19%), Positives = 124/346 (35%), Gaps = 67/346 (19%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            V V G  GF+G+ LVK LL+     +   V    D   S+    +P      +R  E  
Sbjct: 34  NVMVVGGAGFVGSNLVKRLLELGVNQV--HVV---DNLLSAEKINVPD--HPAVRFSETS 86

Query: 68  VLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-G 122
           + D   ++   +    VFH+A+      ++ DP+   +   L     TL + E  K F  
Sbjct: 87  ITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTL----TTLKLYERLKHFKR 142

Query: 123 VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
           +++VV +++  +I        K  +ET    L    S    Y +SK   E  +  + ++H
Sbjct: 143 LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDS---PYSMSKIFGEFYSVYYHKQH 199

Query: 183 GVDVVAIHPATCLGPLMQPYLNASC--------AV----LQQLLQG-----------SKD 219
            +  V        GP                   V    + + L+G           ++D
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259

Query: 220 TQEYHWLGAVPVKDVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKL--FPEFPV 276
                +   + V+DVA   +         G Y + +       D A +++++        
Sbjct: 260 -----F---IFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELD 311

Query: 277 HRFDGETQPGLIPCK---DAAKRLMDLGLVFTP---VEDAVRETVE 316
                  +P     K      K   +LG  F+    ++D +R+T+E
Sbjct: 312 R---LPKRPWDNSGKRFGSPEKARRELG--FSADVSIDDGLRKTIE 352

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 96.2 bits (240), Expect = 7e-23
 Identities = 71/335 (21%), Positives = 113/335 (33%), Gaps = 73/335 (21%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            V +TG  G IG+ + + LL+     +      G D   +     L      NL   E  
Sbjct: 23  KVFITGICGQIGSHIAELLLERGDKVV------GIDNFATGRREHLKD--HPNLTFVEGS 74

Query: 68  VLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPA---VQGTLNVLEAAKRFG 122
           + D   V++ +   +   V H A   + +DP D              G  NV++AAK+  
Sbjct: 75  IADHALVNQLIGDLQPDAVVHTA--ASYKDPDDW----YNDTLTNCVGGSNVVQAAKKNN 128

Query: 123 VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
           V R V   +       P    +        +     S    Y +SK+  E     + E  
Sbjct: 129 VGRFVYFQTALCYGVKP--IQQPVRLDHPRN--PANSS---YAISKSANED----YLEYS 177

Query: 183 GVDVVAIHPATCLGPLMQPYLNASCAVL----QQLLQGSKDTQEYHWLGA-----VPVKD 233
           G+D V    A  +GP            L    Q+L +G K       +       V VKD
Sbjct: 178 GLDFVTFRLANVVGPRNVS------GPLPIFFQRLSEGKKCF-----VTKARRDFVFVKD 226

Query: 234 VAKAQVLLFESPAASGRYLCTNGIYQFG--------DFAERVSKLF-PEFPVHRFDGETQ 284
           +A+A V   +           +G Y F         +  + V +             E  
Sbjct: 227 LARATVRAVDGVG--------HGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELG 278

Query: 285 PGLIP--CKDAAKRLMDLGLV-FTPVEDAVRETVE 316
           P   P    D ++ + D G + FTP+++ V   V 
Sbjct: 279 PDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVA 313

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 94.9 bits (237), Expect = 1e-22
 Identities = 65/335 (19%), Positives = 101/335 (30%), Gaps = 72/335 (21%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSI---NATVFPGSDSSHLFALPGAGDANLRVFEAD 67
            + +TG  GFIG  L + L+ +        +  V P                  +  E  
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGT----------GKFLEKP 58

Query: 68  VLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           VL+     R +   + V+H+AS    P + + P+D         V    ++L      GV
Sbjct: 59  VLE--LEERDLSDVRLVYHLASHKSVPRSFKQPLDYLD-----NVDSGRHLLALCTSVGV 111

Query: 124 RRVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE 177
            +VVV S+   +      +P          E S             Y  SK   E  A  
Sbjct: 112 PKVVVGST-CEVYGQADTLP--------TPEDSPLSPRSP------YAASKVGLEMVAGA 156

Query: 178 FAEKHGVDVVAI-HPATCLGPLMQPYLNASCAV---LQQLLQGSKDTQEYHWLGA----- 228
                    V I       GP  +P  +A   V      LL  ++        G      
Sbjct: 157 HQRASVAPEVGIVRFFNVYGPGERP--DA--LVPRLCANLLTRNELPV----EGDGEQRR 208

Query: 229 --VPVKDVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQP 285
               + DV    V L   P         +       D    +    P   V R   + +P
Sbjct: 209 DFTYITDVVDKLVALANRP-LPSVVNFGSGQSLSVNDVIRILQATSPAAEVARK--QPRP 265

Query: 286 GLIP--CKDAAKRLMDLGL--VFTPVEDAVRETVE 316
             I     D A +   +G       +E+ +R T+E
Sbjct: 266 NEITEFRADTALQTRQIGERSGGIGIEEGIRLTLE 300

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 93.7 bits (234), Expect = 4e-22
 Identities = 62/340 (18%), Positives = 111/340 (32%), Gaps = 69/340 (20%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            + VTG  GFIG+ +V  L ++N       V    D   S +   +        R+ +AD
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSESN----EIVVI---DNLSSGNEEFVN----EAARLVKAD 51

Query: 68  VLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           +     +   ++G + V+H+A+        E+P +  +      V  T  +LEA ++ GV
Sbjct: 52  LAAD-DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRN----NVLATYRLLEAMRKAGV 106

Query: 124 RRVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE 177
            R+V TS+ S +      +P P        E   T           Y  SK   E     
Sbjct: 107 SRIVFTST-STVYGEAKVIPTP--------EDYPTHPISL------YGASKLACEALIES 151

Query: 178 FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-----D-TQE--YHWLGAV 229
           +     +       A  +G     +      +++      +     +  Q   Y     +
Sbjct: 152 YCHTFDMQAWIYRFANVIGR-RSTHGVIYDFIMKLKRNPEELEILGNGEQNKSY-----I 205

Query: 230 PVKDVAKAQVLLFESPAASGRYLCTNG----IYQFGDFAERVSKLFPEFPVHRFDGETQP 285
            + D   A +           +   +     + +  +       L P             
Sbjct: 206 YISDCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPR-FRFTGGDRGWK 264

Query: 286 GLIPCKDA-AKRLMDLGLVFTP---VEDAVRETVESLKAK 321
           G +P      ++L  LG  + P    E+AVR  V  L   
Sbjct: 265 GDVPVMLLSIEKLKRLG--WKPRYNSEEAVRMAVRDLVED 302

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 91.3 bits (226), Expect = 5e-21
 Identities = 40/318 (12%), Positives = 81/318 (25%), Gaps = 27/318 (8%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              + G  G IG  L + L   +       V+  +  +         D  +   + D+ D
Sbjct: 3   VALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHE---DNPINYVQCDISD 59

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
                  +     V HV            E+E      +   NVL+A          ++ 
Sbjct: 60  PDDSQAKLSPLTDVTHVFYVTWA--NRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISL 117

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
                     ++     E+          R K+      L +    E  +K G+      
Sbjct: 118 QTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHR 177

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG----------AVPVKDVAKAQVL 240
           P    G      +N    +         + +   + G                +A+  + 
Sbjct: 178 PGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIW 237

Query: 241 LFESPAASGR-YLCTNG--------IYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCK 291
               P A    +  +NG             +        + E    +     +      +
Sbjct: 238 AAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWE 297

Query: 292 DAAKRLMDLGLVFTPVED 309
           +  +     GL  T ++D
Sbjct: 298 EIVRE---NGLTPTKLKD 312

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 90.4 bits (225), Expect = 7e-21
 Identities = 57/336 (16%), Positives = 109/336 (32%), Gaps = 58/336 (17%)

Query: 12  VCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           + + GA G IGT L + L       ++ A        S +  L      +      + LD
Sbjct: 5   ILIIGACGQIGTELTQKLRKLYGTENVIA--------SDIRKLNTDVVNSGPFEVVNALD 56

Query: 71  SGAVSRAVEGCK--GVFHVA---SPCTLEDPVDPEKELILPA---VQGTLNVLEAAKRFG 122
              +   VE  K   ++ +A   S          EK         +    +VL  AK   
Sbjct: 57  FNQIEHLVEVHKITDIYLMAALLS-------ATAEKNPAFAWDLNMNSLFHVLNLAKAKK 109

Query: 123 VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR-KKWYPVSKTLAEKAAWEFAEK 181
           ++++   SSI+   P      K          +Y        Y +SK   E+    +   
Sbjct: 110 IKKIFWPSSIAVFGPTT---PKENTP------QYTIMEPSTVYGISKQAGERWCEYYHNI 160

Query: 182 HGVDVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVA 235
           +GVDV +I     +     P     + +  +  + +   K          +  + + D  
Sbjct: 161 YGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAI 220

Query: 236 KAQVLLFESPAASGRYLCTNGIYQF----GDFAERVSKLFPEFPVH-RFD-----GETQP 285
            A + + ++P    +   +  +        + A  + K  PEF +    D      ++ P
Sbjct: 221 DATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWP 280

Query: 286 GLIPCKDAAKRLMDLGLVFTP---VEDAVRETVESL 318
             I    A +   D    +     +E   ++ +E L
Sbjct: 281 ASIDDSQARE---DWD--WKHTFDLESMTKDMIEHL 311

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 89.4 bits (222), Expect = 2e-20
 Identities = 64/346 (18%), Positives = 112/346 (32%), Gaps = 67/346 (19%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINAT--------VFPGSDSSHLFALPGAGDANLR 62
            + + GA G +G  L + L+ +                  P +        P      + 
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEA--------PAGFSGAVD 67

Query: 63  VFEADVLDSGAVSRAVE-GCKGVFHVASPCTLEDPVDPEKELILPA----VQGTLNVLEA 117
              AD+   G   + VE     +FH+A+  + E  +D +K          + GT  + +A
Sbjct: 68  ARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDK-----GYRINLDGTRYLFDA 122

Query: 118 AKRFGVR-----RVVVTSSISAI-VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLA 171
            +    +     RVV TSSI+    P P        +   T      +    Y   K + 
Sbjct: 123 IRIANGKDGYKPRVVFTSSIAVFGAPLP----YPIPDEFHTT---PLTS---YGTQKAIC 172

Query: 172 EKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNAS---CAVLQQLLQGSK-----DTQEY 223
           E    +++ +   D + I   T      +P   AS     +L++ L G +          
Sbjct: 173 ELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR 232

Query: 224 HWLGAVPVKDVAKAQVLLFESPAA---SGRYLCTNGI-YQFGDFAERVSKLFPEFPVHRF 279
           HW      +      +             R L   G+    G+  E + K+  E  V   
Sbjct: 233 HWH--ASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALI 290

Query: 280 DGETQPGLI------PCKDAAKRLMDLGLVFTP---VEDAVRETVE 316
             E    ++           AKR  +LG  FT     E+ ++  +E
Sbjct: 291 RREPNEMIMRMCEGWAPGFEAKRARELG--FTAESSFEEIIQVHIE 334

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 87.6 bits (218), Expect = 6e-20
 Identities = 75/356 (21%), Positives = 118/356 (33%), Gaps = 95/356 (26%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
           + VTG  GFIG+ LV  L++  Y      V    D   S     +      +  +   D+
Sbjct: 3   IVVTGGAGFIGSHLVDKLVELGYE---VVVV---DNLSSGRREFVN----PSAELHVRDL 52

Query: 69  LDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
            D      A      VFH A+      +  +P+    E     V  T NVLE A++ GVR
Sbjct: 53  KDYSWG--AGIKGDVVFHFAANPEVRLSTTEPIVHFNE----NVVATFNVLEWARQTGVR 106

Query: 125 RVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
            VV  SS S +      +P          E               Y  +K   E     +
Sbjct: 107 TVVFASS-STVYGDADVIP--------TPEEEPYKPISV------YGAAKAAGEVMCATY 151

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAV----LQQLLQGSK------D-TQE--YHW 225
           A   GV  +A+  A  +GP ++        V    + +L +         D TQ   Y  
Sbjct: 152 ARLFGVRCLAVRYANVVGPRLRH------GVIYDFIMKLRRNPNVLEVLGDGTQRKSY-- 203

Query: 226 LGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFG--------DFAERVSKLF-----P 272
              + V+D  +A +  ++                 G        D A+ V+++       
Sbjct: 204 ---LYVRDAVEATLAAWKKFEEMDA---PFLALNVGNVDAVRVLDIAQIVAEVLGLRPEI 257

Query: 273 EFPVHRFDGETQPG----LIPCKDAAKRLMDLGLVFTP---VEDAVRETVESLKAK 321
                  DG   PG    +        +L   G  + P     +AV++T E L  +
Sbjct: 258 RLVPSTPDGRGWPGDVKYMTLAVTKLMKL--TG--WRPTMTSAEAVKKTAEDLAKE 309

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 88.6 bits (220), Expect = 6e-20
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 18/203 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TGA GFI + + + L    +  I +        +           +LRV E      
Sbjct: 32  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVME------ 85

Query: 72  GAVSRAVEGCKGVFHVASPC-----TLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
               +  EG   VF++A+          +       ++      + N++EAA+  G++R 
Sbjct: 86  -NCLKVTEGVDHVFNLAADMGGMGFIQSNHS----VIMYNNTMISFNMIEAARINGIKRF 140

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
              SS + I P              +D  +    +  + + K   E+    + +  G++ 
Sbjct: 141 FYASS-ACIYPEFKQLETTNVSLKESDA-WPAEPQDAFGLEKLATEELCKHYNKDFGIEC 198

Query: 187 VAIHPATCLGPLMQPYLNASCAV 209
                    GP          A 
Sbjct: 199 RIGRFHNIYGPFGTWKGGREKAP 221

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 85.9 bits (213), Expect = 3e-19
 Identities = 58/352 (16%), Positives = 105/352 (29%), Gaps = 76/352 (21%)

Query: 12  VCVTGANGFIGTWLVKTLL----------DNNYTSINATVFPGSDSSHLFALPGAGDANL 61
           V + G NGFIG  L + LL          D    +I          S     P     + 
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI----------SRFLNHP-----HF 47

Query: 62  RVFEADV-LDSGAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQGTLNVLE 116
              E D+ + S  +   V+ C  V  + +  T      +P+     +     +  L ++ 
Sbjct: 48  HFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPL----RVFELDFEENLRIIR 103

Query: 117 AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAA 175
              ++  R  ++  S S +        K FDE     +    ++ +W Y VSK L ++  
Sbjct: 104 YCVKYRKR--IIFPSTSEVYGMC--SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 159

Query: 176 WEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAV-------LQQLLQGSKDT------QE 222
           W + EK G+      P   +GP +     A           +  L++GS         Q+
Sbjct: 160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK 219

Query: 223 ----YHWLGAVPVKDVAKAQVLLFESPAASGRYLCTN-----GIYQFGDFAERVSKLFPE 273
                       ++D  +A   + E+          N           +  E +   F +
Sbjct: 220 RCFTD-------IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEK 272

Query: 274 FPVHRFDGETQPGLIPCKDAAKRLMDLGLVFTPVEDAVRETVESLKAKGFLG 325
            P+           +    +              +D          A   L 
Sbjct: 273 HPLRHHFPPFAGFRVVESSSYYGK--------GYQDVEHRKPSIRNAHRCLD 316

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 80.0 bits (198), Expect = 6e-18
 Identities = 40/249 (16%), Positives = 71/249 (28%), Gaps = 47/249 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + GA G  G   +   +   Y  +   V    DSS L +          V   DVL 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYE-VTVLV---RDSSRLPSEGPRP---AHVVVGDVLQ 57

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
           +  V + V G   V  +       + + P   +     +G  N++ A K  GV +VV  +
Sbjct: 58  AADVDKTVAGQDAVIVLLGT---RNDLSPTTVM----SEGARNIVAAMKAHGVDKVVACT 110

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S   +        ++   T                           +   + G+  VA+ 
Sbjct: 111 SAFLLWDPTKVPPRLQAVTDD----------------HIRMH----KVLRESGLKYVAVM 150

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P      +    L  +  V       S           +   D+    +    +    G 
Sbjct: 151 P----PHIGDQPLTGAYTVTLDGRGPS---------RVISKHDLGHFMLRCLTTDEYDGH 197

Query: 251 YLCTNGIYQ 259
               +  YQ
Sbjct: 198 STYPSHQYQ 206

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 82.5 bits (204), Expect = 7e-18
 Identities = 52/303 (17%), Positives = 100/303 (33%), Gaps = 69/303 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDSSHLFALPGAGDANL 61
            V + G NGFIG  L K +L          +  T              L          +
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQT---------DRLGDLVKHE-----RM 71

Query: 62  RVFEADV-LDSGAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQGTLNVLE 116
             FE D+ ++   V   V+ C  +  + +  T    ++ P+     +     +  L ++ 
Sbjct: 72  HFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPL----RVFELDFEANLPIVR 127

Query: 117 AAKRFGVRRVVV-TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKA 174
           +A ++G   V   TS +  +  +  +        ++  +   K R  W Y  SK L ++ 
Sbjct: 128 SAVKYGKHLVFPSTSEVYGMCADEQFDPDA-SALTYGPIN--KPR--WIYACSKQLMDRV 182

Query: 175 AWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAV-------LQQLLQGSKDT------Q 221
            W +    G++     P   +GP +                 L  +++G   +      Q
Sbjct: 183 IWGYG-MEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQ 241

Query: 222 E----YHWLGAVPVKDVAKAQVLLFESPAASGRYLCTN-----GIYQFGDFAERVSKLFP 272
           +    Y       V D   A + + E+          N       +   + A ++ +L  
Sbjct: 242 KRAFTY-------VDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAA 294

Query: 273 EFP 275
           EFP
Sbjct: 295 EFP 297

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 82.3 bits (204), Expect = 7e-18
 Identities = 61/364 (16%), Positives = 116/364 (31%), Gaps = 85/364 (23%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYT-----SINATVFPGSDSS---HLFA 52
           +  +     +T  +TG  GFIG+ L++ LL  N       + +     G   +       
Sbjct: 17  ITQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFS----TGHQYNLDEVKTL 72

Query: 53  LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAV 108
           +     +     E D+ D     + ++G   V H A+    P ++ DP+          +
Sbjct: 73  VSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNAT----NI 128

Query: 109 QGTLNVLEAAKRFGVRRVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKK 162
            G LN+L AAK   V+     +S S+       +P          E +        +   
Sbjct: 129 TGFLNILHAAKNAQVQSFTYAAS-SSTYGDHPALP--------KVEEN------IGNPLS 173

Query: 163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVL----QQLLQG-- 216
            Y V+K + E  A  +A  +G   + +      G    P   A  AV+      +L+G  
Sbjct: 174 PYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNG-AYAAVIPKWTAAMLKGDD 232

Query: 217 ---------SKD-TQEYHWLGAVPVKDVAKAQVL-LFESPAASGR-Y-LCTNGIYQFGDF 263
                    S+D    Y       + +V +  +L      +A    Y +         + 
Sbjct: 233 VYINGDGETSRDFC--Y-------IDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNEL 283

Query: 264 AERVSKLFPEFPVHRFD----GETQPGLIPCK----DAAKRLMDLGLVFTP---VEDAVR 312
           +  +                  E + G +         A     L   + P   + + +R
Sbjct: 284 SGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAID--LLK--YRPNIKIREGLR 339

Query: 313 ETVE 316
            ++ 
Sbjct: 340 LSMP 343

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 78.7 bits (194), Expect = 3e-17
 Identities = 50/255 (19%), Positives = 78/255 (30%), Gaps = 49/255 (19%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
            TV VTGA+G  G  + K L + +        V        +            VF  D+
Sbjct: 5   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-------EADVFIGDI 57

Query: 69  LDSGAVSRAVEGCKGVFHVAS----------PCTLEDPVDPEKELILPA---VQGTLNVL 115
            D+ +++ A +G   +  + S          P     P    ++   P      G  N +
Sbjct: 58  TDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQI 117

Query: 116 EAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA 175
           +AAK  GV+ +VV  S+    P+                           V K  AE+  
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGN---------------ILVWKRKAEQY- 161

Query: 176 WEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA 235
                  G     I      G L+           ++LL G  D         VP  DVA
Sbjct: 162 ---LADSGTPYTIIRA----GGLLDKEGGV-----RELLVGKDDELLQTDTKTVPRADVA 209

Query: 236 KAQVLLFESPAASGR 250
           +  +       A  +
Sbjct: 210 EVCIQALLFEEAKNK 224

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 78.0 bits (192), Expect = 2e-16
 Identities = 41/253 (16%), Positives = 69/253 (27%), Gaps = 59/253 (23%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TGA GF+G  L   L                              +  +FE      
Sbjct: 3   IVITGAKGFVGKNLKADLTSTT--------------------------DHHIFEVHRQTK 36

Query: 72  GA-VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV-VT 129
              +  A+     + H+A     E   +         V    +VL+   R   +  + ++
Sbjct: 37  EEELESALLKADFIVHLAGVNRPEHDKEFSLG----NVSYLDHVLDILTRNTKKPAILLS 92

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           SSI A   NP                        Y  SK   E+   E+AE++G  V   
Sbjct: 93  SSIQATQDNP------------------------YGESKLQGEQLLREYAEEYGNTVYIY 128

Query: 190 HPATCLGPLMQP-YLNASCAVLQQLLQGS--KDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
                 G   +P Y +       ++ +    +       L    V D+        E   
Sbjct: 129 RWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTP 188

Query: 247 ASGRYLCTNGIYQ 259
                + T     
Sbjct: 189 TIENGVPTVPNVF 201

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 43/241 (17%), Positives = 81/241 (33%), Gaps = 50/241 (20%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V V GANG +  +L+  L +  +    A V        L    GA D    +  A++ + 
Sbjct: 24  VLVVGANGKVARYLLSELKNKGHE-PVAMVRNEEQGPELRER-GASD----IVVANLEED 77

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAV--QGTLNVLEAAKRFGVRRVVVT 129
              S A      V   A                   +   G +  ++ A++ G++R ++ 
Sbjct: 78  --FSHAFASIDAVVFAAGSGPHTGADKTI------LIDLWGAIKTIQEAEKRGIKRFIMV 129

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           SS+  + P+ G                     + Y V+K LA+    +  ++  +D   +
Sbjct: 130 SSVGTVDPDQGPMN-----------------MRHYLVAKRLAD----DELKRSSLDYTIV 168

Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG 249
            P    GPL             ++      ++      ++   DVAK    L +     G
Sbjct: 169 RP----GPLSNE------ESTGKVTVSPHFSE---ITRSITRHDVAKVIAELVDQQHTIG 215

Query: 250 R 250
           +
Sbjct: 216 K 216

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 74.1 bits (182), Expect = 1e-15
 Identities = 35/237 (14%), Positives = 72/237 (30%), Gaps = 48/237 (20%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V + GA G I   ++  L D                + +           ++   DVL+
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFA---RQPAKIHKPYPTN---SQIIMGDVLN 78

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             A+ +A++G   V+   +   L+                  +V+ A K   V+R++   
Sbjct: 79  HAALKQAMQGQDIVYANLTGEDLD--------------IQANSVIAAMKACDVKRLIFVL 124

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S+      PG   +  +      L+                 + A +  E  G++   + 
Sbjct: 125 SLGIYDEVPGKFVEWNNAVIGEPLK---------------PFRRAADAIEASGLEYTILR 169

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
           P          +L     +  +L   ++  +       V  K VA     + + P  
Sbjct: 170 P---------AWLTDEDIIDYELTSRNEPFKG----TIVSRKSVAALITDIIDKPEK 213

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 75.2 bits (186), Expect = 1e-15
 Identities = 71/344 (20%), Positives = 119/344 (34%), Gaps = 78/344 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            V VTG  GFIG+ +V+ LL          V    D   +     +P      +  F  D
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLE---VAVL---DNLATGKRENVP----KGVPFFRVD 51

Query: 68  VLDSGAVSRAVEGCK--GVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           + D   V RA    +   V H A+      ++EDPV   +      + G LN+LEA +++
Sbjct: 52  LRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEV----NLLGGLNLLEACRQY 107

Query: 122 GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD-LEYCKSRKKWYPVSKTLAEKAAWEFAE 180
           GV ++V  S+  AI        +  +ET               Y  SK   E     + +
Sbjct: 108 GVEKLVFASTGGAIYGEVPEGERA-EETWPPRPKSP-------YAASKAAFEHYLSVYGQ 159

Query: 181 KHGVDVVAI------------HPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHW 225
            +G+  V++            H    +  +            +++L+G   T   ++   
Sbjct: 160 SYGLKWVSLRYGNVYGPRQDPHGEAGVVAI----------FAERVLKGLPVTLYARKTPG 209

Query: 226 LGA-----VPVKDVAKAQVLLFESPAASGRYLCTNG----IYQFGDFAERVSKLFPEFPV 276
                   V V DVA+A  L     +  G Y    G      +        +       V
Sbjct: 210 DEGCVRDYVYVGDVAEAHALALF--SLEGIYNVGTGEGHTTREVLMAVAEAAGK--APEV 265

Query: 277 HRFDGETQPGLIPCKDA-AKRLMDLGLVFTP---VEDAVRETVE 316
                  +PG +        +LM  G  + P    ++ +R TV+
Sbjct: 266 Q--PAPPRPGDLERSVLSPLKLMAHG--WRPKVGFQEGIRLTVD 305

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 40/244 (16%), Positives = 80/244 (32%), Gaps = 58/244 (23%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV-LD 70
           + + G+ G +G  L+K+L   +Y  I A          +                DV   
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQ-IYAGA---RKVEQVPQYNNVK-----AVHFDVDWT 53

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              +++ + G   + +V+            K      + G + +++AA++  V+R ++ S
Sbjct: 54  PEEMAKQLHGMDAIINVSGS----GGKSLLK----VDLYGAVKLMQAAEKAEVKRFILLS 105

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           +I ++ P   W G  FD              K Y ++K  A+       ++  +D   I 
Sbjct: 106 TIFSLQP-EKWIGAGFDAL------------KDYYIAKHFADLYL---TKETNLDYTIIQ 149

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY----HWLGAVPVKDVAKAQVLLFESPA 246
           P                      L   + T           +  + DVA     L  +  
Sbjct: 150 PGA--------------------LTEEEATGLIDINDEVSASNTIGDVADTIKELVMTDH 189

Query: 247 ASGR 250
           + G+
Sbjct: 190 SIGK 193

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 73.5 bits (180), Expect = 2e-15
 Identities = 28/239 (11%), Positives = 69/239 (28%), Gaps = 35/239 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + + GA G  G+ +++   +  +  + A V    ++  +         ++ + + D+ D 
Sbjct: 3   IGIIGATGRAGSRILEEAKNRGHE-VTAIV---RNAGKITQTH----KDINILQKDIFD- 53

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
                 +     V         E             V    +++         R++V   
Sbjct: 54  -LTLSDLSDQNVVVDAYGISPDEAEKH---------VTSLDHLISVLNGTVSPRLLVVGG 103

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
            +++  +      + +     +  Y        P ++  A++     + +       I P
Sbjct: 104 AASLQIDED-GNTLLESKGLREAPYY-------PTARAQAKQLEHLKSHQAEFSWTYISP 155

Query: 192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           +    P               LL GS           + ++D A A +   E P     
Sbjct: 156 SAMFEP--GERTGDYQIGKDHLLFGSDGN------SFISMEDYAIAVLDEIERPNHLNE 206

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 73.1 bits (179), Expect = 2e-15
 Identities = 34/238 (14%), Positives = 61/238 (25%), Gaps = 45/238 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + GA G I   L  TLL      I                       + V E    +
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYG---RQLKTRIPPEIIDHERVTVIEGSFQN 63

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
            G + +AV   + VF  A                  +     ++++A  R  +RRV+  S
Sbjct: 64  PGXLEQAVTNAEVVFVGAM----------------ESGSDMASIVKALSRXNIRRVIGVS 107

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
                   P    K                    P+S    E+ A     +  ++   + 
Sbjct: 108 MAGLSGEFPVALEKW--------------TFDNLPISYVQGERQARNVLRESNLNYTILR 153

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
                  L          ++ +                V  + V KA   +  +   +
Sbjct: 154 L----TWLYNDPEXTDYELIPE--------GAQFNDAQVSREAVVKAIFDILHAADET 199

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 60/346 (17%), Positives = 103/346 (29%), Gaps = 50/346 (14%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAG 57
               +  E   + VTG  GFIG+ +VK L D   T I   V    D       F      
Sbjct: 38  TGGGSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDI--LVV---DNLKDGTKFVNLVDL 92

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVA----SPCTLEDPVDPEKELILPAVQGTLN 113
           +    + + D L            + +FH      +             ++    Q +  
Sbjct: 93  NIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKY------MMDNNYQYSKE 146

Query: 114 VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
           +L       +   +  SS +A     G +   F E+   + E   +    +  SK L ++
Sbjct: 147 LLHYCLEREI-PFLYASS-AATY---GGRTSDFIES--REYEKPLNV---FGYSKFLFDE 196

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDTQEYHWLGA-- 228
              +   +    +V        GP         + +  +  QL  G +  + +       
Sbjct: 197 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNG-ESPKLFEGSENFK 255

Query: 229 ---VPVKDVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQ 284
              V V DVA   +   E+   SG + L T     F   A+       +  +        
Sbjct: 256 RDFVYVGDVADVNLWFLENG-VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPF--- 311

Query: 285 PGLIPCKDAA------KRLMDLG--LVFTPVEDAVRETVESLKAKG 322
           P  +  +  A        L   G    F  V + V E +  L    
Sbjct: 312 PDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA 357

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 73.8 bits (182), Expect = 4e-15
 Identities = 60/335 (17%), Positives = 101/335 (30%), Gaps = 50/335 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
           + VTG  GFIG+ +VK L D   T I   V    D       F      +    + + D 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDI--LVV---DNLKDGTKFVNLVDLNIADYMDKEDF 56

Query: 69  LDSGAVSRAVEGCKGVFHVA----SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           L            + +FH      +             ++    Q +  +L       + 
Sbjct: 57  LIQIMAGEEFGDVEAIFHEGACSSTTEWDGKY------MMDNNYQYSKELLHYCLEREI- 109

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
             +  SS +A     G +   F E+   + E   +    Y  SK L ++   +   +   
Sbjct: 110 PFLYASS-AATY---GGRTSDFIES--REYEKPLNV---YGYSKFLFDEYVRQILPEANS 160

Query: 185 DVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDTQEYHWLGA-----VPVKDVAK 236
            +V        GP         + +  +  QL  G +  + +          V V DVA 
Sbjct: 161 QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNG-ESPKLFEGSENFKRDFVYVGDVAD 219

Query: 237 AQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAA- 294
             +   E+   SG + L T     F   A+       +  +        P  +  +  A 
Sbjct: 220 VNLWFLENG-VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPF---PDKLKGRYQAF 275

Query: 295 -----KRLMDLG--LVFTPVEDAVRETVESLKAKG 322
                  L   G    F  V + V E +  L    
Sbjct: 276 TQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA 310

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 73.0 bits (180), Expect = 9e-15
 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 24/130 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            + +TG  G +G+ L++  L   +      V    D   +     LP    A L V E  
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHE---ILVI---DNFATGKREVLPPV--AGLSVIEGS 73

Query: 68  VLDSGAVSRAVEGCK--GVFHVA----SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           V D+G + RA +  K   V H A     P   +D  +         VQG++NV +AA + 
Sbjct: 74  VTDAGLLERAFDSFKPTHVVHSAAAYKDP---DDWAEDAAT----NVQGSINVAKAASKA 126

Query: 122 GVRRVVVTSS 131
           GV+R++   +
Sbjct: 127 GVKRLLNFQT 136

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 69.0 bits (169), Expect = 2e-13
 Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 44/212 (20%)

Query: 6   EKEEETVCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDS--SHLFALP 54
           EK+ + + +TG  GF+G+ L   L+         DN +T        G      H     
Sbjct: 24  EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT--------GRKRNVEHWIGHE 75

Query: 55  GAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQG 110
                N  +   DV++   +         ++H+ASP +    + +P+    + +     G
Sbjct: 76  -----NFELINHDVVEPLYIE-----VDQIYHLASPASPPNYMYNPI----KTLKTNTIG 121

Query: 111 TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKT 169
           TLN+L  AKR G R  ++ +S S +  +P  +     E  W  +     R    Y   K 
Sbjct: 122 TLNMLGLAKRVGAR--LLLASTSEVYGDP--EVHPQSEDYWGHVNPIGPR--ACYDEGKR 175

Query: 170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
           +AE   + + ++ GV+V         GP M  
Sbjct: 176 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 207

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 67.4 bits (164), Expect = 2e-13
 Identities = 33/240 (13%), Positives = 58/240 (24%), Gaps = 35/240 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLD 70
           + V GA G  G+ +V       +      V     D        GA      V       
Sbjct: 3   IAVLGATGRAGSAIVAEARRRGHE-----VLAVVRDPQKAADRLGAT-----VATLVKEP 52

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
                  ++    V    S      P    +  +   +    +++   +      V +  
Sbjct: 53  LVLTEADLDSVDAVVDALSV-----PWGSGRGYL--HLDFATHLVSLLRNSDTLAVFILG 105

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S S  +P         D     D     + + WY  +                V+ + I 
Sbjct: 106 SASLAMPGA-------DHPMILDFPESAASQPWYDGALYQYY-EYQFLQMNANVNWIGIS 157

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P+            A    L     G            +   ++A A +   E P A   
Sbjct: 158 PSEAFPSGPATSYVAGKDTLLVGEDGQ---------SHITTGNMALAILDQLEHPTAIRD 208

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 68.9 bits (169), Expect = 2e-13
 Identities = 56/348 (16%), Positives = 112/348 (32%), Gaps = 74/348 (21%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTS--------INATVFPGSDSSHLFALPGAGDANLR 62
           T+ +TG  GF+G+ L     +N+  +         + T+F  +  S L            
Sbjct: 12  TILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGE 71

Query: 63  VFEADVLDSGAVSRAVE-GCKGVFHVA--SPCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
           V  AD+ +   + R  +     +FH A  S  T+ +     + ++    Q  LN+LE A+
Sbjct: 72  VIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQ----ELVMKTNYQAFLNLLEIAR 127

Query: 120 RFGVRRVVVTSSISAI---VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAW 176
                +V+  SS + +      P               E  ++    Y  SK   ++  +
Sbjct: 128 SKKA-KVIYASS-AGVYGNTKAP------NVV---GKNESPENV---YGFSKLCMDE--F 171

Query: 177 EFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQ---QLLQGS-----KD-TQE----Y 223
             +  +    V +      GP        +  VLQ     +        +   Q     Y
Sbjct: 172 VLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVY 231

Query: 224 HWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFG--------DFAERVSKLFPEFP 275
                  ++DV +A V   ++          +G+Y  G        +    + +   +F 
Sbjct: 232 -------IEDVIQANVKAMKAQK--------SGVYNVGYSQARSYNEIVSILKEHLGDFK 276

Query: 276 VHRFDGETQPGLIP--CKDAAKRLMDLGLV-FTPVEDAVRETVESLKA 320
           V                      ++DL       +E  +++ +  + A
Sbjct: 277 VTYIK-NPYAFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHA 323

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 67.0 bits (164), Expect = 6e-13
 Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 14/125 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLFALPGAGDANLRVFEADVL 69
            V V G  G  G  + +TLL++    +      P   ++    L GA      V + D  
Sbjct: 7   LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGA-----EVVQGDQD 61

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           D   +  A+ G    F V +     +    E+E+     QG   + + A+R G+  VV +
Sbjct: 62  DQVIMELALNGAYATFIVTNY---WESCSQEQEV----KQGK-LLADLARRLGLHYVVYS 113

Query: 130 SSISA 134
              + 
Sbjct: 114 GLENI 118

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 66.3 bits (162), Expect = 2e-12
 Identities = 53/363 (14%), Positives = 97/363 (26%), Gaps = 66/363 (18%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSIN---------------ATVFPGSDSSH-LFALPGAG 57
           V G +G+ G      L   NY                    ++ P +     +       
Sbjct: 16  VIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT 75

Query: 58  DANLRVFEADVLDSGAVSRAVEGCK--GVFHVAS----PCTLEDPVDPEKELILPAVQGT 111
             ++ ++  D+ D   ++ + +  +   V H       P ++ D            V GT
Sbjct: 76  GKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRA-VYTQHNNVIGT 134

Query: 112 LNVLEAAKRFGVRRVVVTSSISAI-----VPNPGWKGKVFDETSWTDLEYCKSRKKWYPV 166
           LNVL A K FG    +V            +        +        L Y K    +Y +
Sbjct: 135 LNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHL 194

Query: 167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCA----------------VL 210
           SK           +  G+    ++     G                              
Sbjct: 195 SKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFC 254

Query: 211 QQLLQGS------KDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNG---IYQFG 261
            Q   G       K  Q   +L    ++D  +   +   +PA +G +   N     +   
Sbjct: 255 VQAAVGHPLTVYGKGGQTRGYLD---IRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVN 311

Query: 262 DFAERVSKLFPE----FPVHRFDGETQPGLIPC-KDAAKRLMDLGLVFTP---VEDAVRE 313
           + A  V+K   +                           +LM+LGL   P    +  +  
Sbjct: 312 ELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGL--EPHYLSDSLLDS 369

Query: 314 TVE 316
            + 
Sbjct: 370 LLN 372

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 61.8 bits (150), Expect = 6e-11
 Identities = 25/133 (18%), Positives = 45/133 (33%), Gaps = 19/133 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVL 69
           T+ V GA G  G  L++      +             +  L A+P        +F+  +L
Sbjct: 7   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV-----TLFQGPLL 61

Query: 70  DSGA-VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           ++   +    EG    F   +            E+      G  ++ +AAKR G  +  +
Sbjct: 62  NNVPLMDTLFEGAHLAFINTTS-------QAGDEI----AIGK-DLADAAKRAGTIQHYI 109

Query: 129 TSSISAIVPNPGW 141
            SS+        W
Sbjct: 110 YSSMPDHSLYGPW 122

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 61.1 bits (149), Expect = 7e-11
 Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 16/129 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + +TGA G +GT +    + N+    +  V    +   +          + V + D  +
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGV---RNVEKVPDDWRGK---VSVRQLDYFN 55

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             ++  A +G   V  +                    +    N++ AAK+ GV  ++   
Sbjct: 56  QESMVEAFKGMDTVVFI-PSIIHPSF---------KRIPEVENLVYAAKQSGVAHIIFIG 105

Query: 131 SISAIVPNP 139
             +    NP
Sbjct: 106 YYADQHNNP 114

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 58.9 bits (143), Expect = 7e-10
 Identities = 47/229 (20%), Positives = 87/229 (37%), Gaps = 26/229 (11%)

Query: 2   ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL 61
            +   +    V + G NGFIG  L + LL  ++  +          S     P     + 
Sbjct: 308 PACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHP-----HF 362

Query: 62  RVFEADV-LDSGAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQGTLNVLE 116
              E D+ + S  +   V+ C  V  + +  T      +P+     +     +  L ++ 
Sbjct: 363 HFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLR----VFELDFEENLRIIR 418

Query: 117 AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAA 175
              ++  R  ++  S S +        K FDE     +    ++ +W Y VSK L ++  
Sbjct: 419 YCVKYRKR--IIFPSTSEVYGMC--SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474

Query: 176 WEFAEKHGVDVVAIHPATCLGPLM----QPYLNASCAVLQ---QLLQGS 217
           W + EK G+      P   +GP +       + +S A+ Q    L++GS
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS 523

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 56.1 bits (135), Expect = 5e-09
 Identities = 57/333 (17%), Positives = 87/333 (26%), Gaps = 63/333 (18%)

Query: 2   ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-------------------F 42
                 E  TV +TGA GF+G +LV  LL      ++  +                   F
Sbjct: 66  LPGPSPELRTVLLTGATGFLGRYLVLELLRR--LDVDGRLICLVRAESDEDARRRLEKTF 123

Query: 43  PGSDSSHLFALPGAGDANLRVFEADV------LDSGAVSRAVEGCKGVFHVASPCTLEDP 96
              D   L          L V   D       LD     R  E    +   A+       
Sbjct: 124 DSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAM------ 177

Query: 97  VD--PEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL 154
           V+  P  EL  P V GT  ++  A    ++     S+   +           D       
Sbjct: 178 VNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTAD-VGAAIEPSAFTEDADIRVIS 236

Query: 155 EYCKSRKKW---YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ----------P 201
                   W   Y  SK   E    E  +   + V        L                
Sbjct: 237 PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVT 296

Query: 202 YLNASCAVLQQL--LQGSKDTQEYHWLGA---VPVKDVAKAQVLLFESPAASGR-----Y 251
            +  S              D++          +PV  VA+A  +L    A S       Y
Sbjct: 297 RMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATY 356

Query: 252 LCTNGIYQ---FGDFAERVSKL-FPEFPVHRFD 280
              N         ++ + + +  +P   +  F 
Sbjct: 357 HVMNPHDDGIGLDEYVDWLIEAGYPIRRIDDFA 389

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 55.0 bits (133), Expect = 7e-09
 Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTS-INATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
           ++ VTGA G +G  +++ LL     S I A V    +      L   G   + V   D  
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIV---RNVEKASTLADQG---VEVRHGDYN 55

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
              ++ +A  G   +  ++ P       +         +    NV++AA+  GV+ +  T
Sbjct: 56  QPESLQKAFAGVSKLLFISGP----HYDNTL------LIVQHANVVKAARDAGVKHIAYT 105

Query: 130 SSISA 134
               A
Sbjct: 106 GYAFA 110

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 55.0 bits (133), Expect = 7e-09
 Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 19/122 (15%)

Query: 14  VTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG 72
           +TGA G +G +++++L+     + I A V    + +   AL   G   + V +AD  D  
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIV---RNPAKAQALAAQG---ITVRQADYGDEA 57

Query: 73  AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI 132
           A++ A++G + +  ++S     +      +          NV+ AAK  GV+ +  TS +
Sbjct: 58  ALTSALQGVEKLLLISSS----EVGQRAPQ--------HRNVINAAKAAGVKFIAYTSLL 105

Query: 133 SA 134
            A
Sbjct: 106 HA 107

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 43/261 (16%), Positives = 67/261 (25%), Gaps = 56/261 (21%)

Query: 11  TVCVTGANGFIGTWLVKTLL-DNNYTSINATV---FPGSDSSHLFALPGAGDANLRVFEA 66
           +V + GA+G  G  L+K +L    ++ +           + ++          N+     
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY---------KNVNQEVV 70

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPC---TLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           D       + A +G    F     C   T           +       L   E AK  G 
Sbjct: 71  DFEKLDDYASAFQGHDVGFC----CLGTTRGKAGAEGFVRV--DRDYVLKSAELAKAGGC 124

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           +   + SS  A            D++S             Y   K   E    E      
Sbjct: 125 KHFNLLSSKGA------------DKSSNFL----------YLQVKGEVEAKVEELKFDR- 161

Query: 184 VDVVAIHPATCLGP--LMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL 241
                  P   L      +P           L              +VPV  V +A +  
Sbjct: 162 --YSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGH------SVPVVTVVRAMLNN 213

Query: 242 FESPAASGRYLCTNG-IYQFG 261
              P      L  N  I+  G
Sbjct: 214 VVRPRDKQMELLENKAIHDLG 234

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 42/169 (24%), Positives = 59/169 (34%), Gaps = 23/169 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVF-----PGSDSSHLFALPGAGDANLRVFEA 66
           V VTG  GF G WL   L      ++ ATV        +  S  F      D  ++    
Sbjct: 12  VFVTGHTGFKGGWLSLWLQ-----TMGATVKGYSLTAPTVPSL-FETARVAD-GMQSEIG 64

Query: 67  DVLDSGAVSRAVEGCK--GVFH-VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           D+ D   +  ++   +   VFH  A P       +P  E     V GT+ +LEA +  G 
Sbjct: 65  DIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEP-VETYSTNVMGTVYLLEAIRHVGG 123

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAE 172
            + VV  +      N  W    + E               Y  SK  AE
Sbjct: 124 VKAVVNITSDKCYDNKEWI-WGYRENEAMGGYD------PYSNSKGCAE 165

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 11/132 (8%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVL 69
           T+ +TG  G  G   V+ +LD   T+    +    D      +     D  +R F  DV 
Sbjct: 23  TILITGGTGSFGKCFVRKVLDT--TNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVR 80

Query: 70  DSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
           D   ++ A+EG     H A+    P    +P+    E I   + G  NV+ A  +  + +
Sbjct: 81  DLERLNYALEGVDICIHAAALKHVPIAEYNPL----ECIKTNIMGASNVINACLKNAISQ 136

Query: 126 VVVTSSISAIVP 137
           V+  S+  A  P
Sbjct: 137 VIALSTDKAANP 148

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 51.0 bits (123), Expect = 2e-07
 Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 25/129 (19%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL----------PGAGDANLRV 63
           VTG  GFIG+  V+ LL   Y        P  +   L +L          P   D  LR 
Sbjct: 5   VTGGAGFIGSHFVRQLLAGAYPD-----VPADEVIVLDSLTYAGNRANLAPVDADPRLRF 59

Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAA 118
              D+ D+G ++R + G   + H A+    E  VD              VQGT  +L+ A
Sbjct: 60  VHGDIRDAGLLARELRGVDAIVHFAA----ESHVDRSIAGAS-VFTETNVQGTQTLLQCA 114

Query: 119 KRFGVRRVV 127
              GV RVV
Sbjct: 115 VDAGVGRVV 123

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 14/131 (10%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADV 68
            V + G  G+IG  +V   +   + +      P    +   +  L        ++ EA +
Sbjct: 6   RVLIVGGTGYIGKRIVNASISLGHPTY-VLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 64

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
            D   +  A++    V    +   L   +  + +L+           EA K  G  +  +
Sbjct: 65  DDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLV-----------EAIKEAGNIKRFL 113

Query: 129 TSSISAIVPNP 139
            S         
Sbjct: 114 PSEFGMDPDIM 124

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 17/127 (13%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSIN--ATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           +TG  GF+G+ L    L      I        G+  + L  L  +   N      D+ + 
Sbjct: 6   ITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDN-LHWL--SSLGNFEFVHGDIRNK 62

Query: 72  GAVSRAVEGCK--GVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAAKRFGVR 124
             V+R +        FH+A     +  +      P        V GTLN+LEA +++   
Sbjct: 63  NDVTRLITKYMPDSCFHLAG----QVAMTTSIDNPC-MDFEINVGGTLNLLEAVRQYNSN 117

Query: 125 RVVVTSS 131
             ++ SS
Sbjct: 118 CNIIYSS 124

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 23/143 (16%), Positives = 40/143 (27%), Gaps = 19/143 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + G  G +G  L + L    +      V  G   S          A ++   ADV  
Sbjct: 5   KILIAGC-GDLGLELARRLTAQGHE-----VT-GLRRS-----AQPMPAGVQTLIADVTR 52

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              ++  V     +       +               V+G  N L A +   ++ V   S
Sbjct: 53  PDTLASIVHLRPEILVYCVAASEYSDEHYRLSY----VEGLRNTLSALEGAPLQHVFFVS 108

Query: 131 SISAIVPNPGWKGKVFDETSWTD 153
           S            +  DE +   
Sbjct: 109 STGV---YGQEVEEWLDEDTPPI 128

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 49.1 bits (117), Expect = 7e-07
 Identities = 34/261 (13%), Positives = 65/261 (24%), Gaps = 60/261 (22%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDAN 60
           M     K    + + G  G+IG  +VK  L   +      VF   +SS    L       
Sbjct: 5   MEENGMKS--KILIFGGTGYIGNHMVKGSLKLGH---PTYVFTRPNSSKTTLLDEFQSLG 59

Query: 61  LRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
             + + ++ +   +   ++    V    +                P +     +LEA K 
Sbjct: 60  AIIVKGELDEHEKLVELMKKVDVVISALAF---------------PQILDQFKILEAIKV 104

Query: 121 FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFA 179
            G  +  + S                                  P    +  K       
Sbjct: 105 AGNIKRFLPSDFGVEEDRINALP---------------------PFEALIERKRMIRRAI 143

Query: 180 EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVK 232
           E+  +    +            ++N        LL+      E    G           +
Sbjct: 144 EEANIPYTYVSA----NCFASYFIN-------YLLRPYDPKDEITVYGTGEAKFAMNYEQ 192

Query: 233 DVAKAQVLLFESPAASGRYLC 253
           D+    + +   P A  R + 
Sbjct: 193 DIGLYTIKVATDPRALNRVVI 213

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 48.7 bits (116), Expect = 8e-07
 Identities = 38/275 (13%), Positives = 72/275 (26%), Gaps = 62/275 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLFALPGAGDANLRVFEAD 67
            + + GA G+IG  + K  LD  +      V   +   +S     L     +   +    
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHP-TFLLVRESTASSNSEKAQLLESFKASGANIVHGS 64

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + D  ++  AV+    V                       ++  +N+++A K  G  +  
Sbjct: 65  IDDHASLVEAVKNVDVVISTVGS---------------LQIESQVNIIKAIKEVGTVKRF 109

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFAEKHGVDV 186
             S     V N                          P       KA      E  G+  
Sbjct: 110 FPSEFGNDVDNVHA---------------------VEPAKSVFEVKAKVRRAIEAEGIPY 148

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDVAKAQV 239
             +            +L +    L Q    +    +   LG        V  +D+    +
Sbjct: 149 TYVSS----NCFAGYFLRS----LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTI 200

Query: 240 LLFESPAASGR--YLCTNG----IYQFGDFAERVS 268
              + P    +  YL        + +     E+  
Sbjct: 201 KAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI 235

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 44/259 (16%), Positives = 77/259 (29%), Gaps = 61/259 (23%)

Query: 11  TVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
            V + GA G  G  L+  +L +     + A                A    L      + 
Sbjct: 7   RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK----------ALAEHPRLDNPVGPLA 56

Query: 70  DSGAVSRAVEGCKGVFHVASPC---TLEDPVDPEKELILPAVQ--GTLNVLEAAKRFGVR 124
           +   + +        F     C   T+++    E      AV     L V + A   G R
Sbjct: 57  EL--LPQLDGSIDTAFC----CLGTTIKEAGSEEA---FRAVDFDLPLAVGKRALEMGAR 107

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
             +V S++ A            D  S             Y   K   E+A  E       
Sbjct: 108 HYLVVSALGA------------DAKSSIF----------YNRVKGELEQALQEQGWPQ-- 143

Query: 185 DVVAIHPATCLGPLMQPYLNA--SCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF 242
            +    P+   GP  + +  A    A + ++L G            +   D+A+A   L 
Sbjct: 144 -LTIARPSLLFGP-REEFRLAEILAAPIARILPGK--------YHGIEACDLARALWRLA 193

Query: 243 ESPAASGRYLCTNGIYQFG 261
                  R++ ++ + + G
Sbjct: 194 LEEGKGVRFVESDELRKLG 212

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score = 47.9 bits (115), Expect = 2e-06
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 18/123 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS----SHLFALPGAGDANLRVFEA 66
            + VTG  GFIG+  V  +  NN+  ++ TV    D      +   L       + +   
Sbjct: 6   NIIVTGGAGFIGSNFVHYVY-NNHPDVHVTVL---DKLTYAGNKANLEAILGDRVELVVG 61

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAAKRF 121
           D+ D+  V +       + H A+    E   D     P    I     GT  +LEAA+++
Sbjct: 62  DIADAELVDKLAAKADAIVHYAA----ESHNDNSLNDPS-PFIHTNFIGTYTLLEAARKY 116

Query: 122 GVR 124
            +R
Sbjct: 117 DIR 119

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 29/258 (11%), Positives = 65/258 (25%), Gaps = 71/258 (27%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + V G +G +G  +VK     +                        +A+   F      
Sbjct: 24  NILVLGGSGALGAEVVKFFKSKS-----WNTI-------SIDFRENPNADH-SFTIKDSG 70

Query: 71  SGAVSRAVEGCK-------------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
              +   +E                G +   +  + ++ +   K +I   +         
Sbjct: 71  EEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNA-SSDEFLKSVKGMIDMNLYSAFASAHI 129

Query: 118 AKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLA 171
             +   +    V+T + +A+    G                       Y  +K     + 
Sbjct: 130 GAKLLNQGGLFVLTGASAALNRTSGMIA--------------------YGATKAATHHII 169

Query: 172 EKAAWEFAE-KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP 230
           +  A E      G   + I P T   P  +                 K   + ++    P
Sbjct: 170 KDLASENGGLPAGSTSLGILPVTLDTPTNR-----------------KYMSDANFDDWTP 212

Query: 231 VKDVAKAQVLLFESPAAS 248
           + +VA+       +  + 
Sbjct: 213 LSEVAEKLFEWSTNSDSR 230

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 45.9 bits (110), Expect = 9e-06
 Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 41/139 (29%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVFEAD 67
           ++ + G  G+IG+  VK L+D   +     V    D+    H  A+        + +  D
Sbjct: 3   SILICGGAGYIGSHAVKKLVDEGLS---VVVV---DNLQTGHEDAIT----EGAKFYNGD 52

Query: 68  VLDSGAVSR--AVEGCKGVFHVASPCTLEDPVDPEKELIL-------PA------VQGTL 112
           + D   +      E  + V H A+               L       P       V G L
Sbjct: 53  LRDKAFLRDVFTQENIEAVMHFAA-------------DSLVGVSMEKPLQYYNNNVYGAL 99

Query: 113 NVLEAAKRFGVRRVVVTSS 131
            +LE    F V + + +S+
Sbjct: 100 CLLEVMDEFKVDKFIFSST 118

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 34/254 (13%), Positives = 64/254 (25%), Gaps = 55/254 (21%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLFALPGAGDANLRVFEAD 67
            + + G  G IG  +V   +     +        +     +    +       + + E D
Sbjct: 4   KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGD 63

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + D   + +A++    V   A                   ++  + +++A K  G  +  
Sbjct: 64  INDHETLVKAIKQVDIVICAAGR---------------LLIEDQVKIIKAIKEAGNVKKF 108

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFAEKHGVDV 186
             S     V                            PV +   EKA+     E  GV  
Sbjct: 109 FPSEFGLDVDRHDA---------------------VEPVRQVFEEKASIRRVIEAEGVPY 147

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDVAKAQV 239
             +            +L      L QL        +   LG        V   DV    +
Sbjct: 148 TYLCC----HAFTGYFL----RNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTI 199

Query: 240 LLFESPAASGRYLC 253
                P    + + 
Sbjct: 200 RAANDPNTLNKAVH 213

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 39/146 (26%), Positives = 53/146 (36%), Gaps = 40/146 (27%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSI---NATVFPGSDSSHLFALPG----AGDANLR 62
           E V VTG  G+IG+  V  LL+  Y  +   N         S   +L       G  ++ 
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG-RSVE 61

Query: 63  VFEADVLDSGAVSR--AVEGCKGVFHVASPCTLEDPVDPEKELILPAV------------ 108
             E D+LD GA+ R         V H A                L AV            
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAG---------------LKAVGESVQKPLDYYR 106

Query: 109 ---QGTLNVLEAAKRFGVRRVVVTSS 131
               GT+ +LE  K  GV+ +V +SS
Sbjct: 107 VNLTGTIQLLEIMKAHGVKNLVFSSS 132

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 44.3 bits (104), Expect = 3e-05
 Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 17/134 (12%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDAN 60
           + S   +    V + GA GFIG ++    LD +  +           S         D  
Sbjct: 6   VPSPKGR----VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKG 61

Query: 61  LRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
             +    + +  A+ + ++  +    V S     + +  +  L+           +A K 
Sbjct: 62  AIIVYGLINEQEAMEKILKEHEIDI-VVS-TVGGESILDQIALV-----------KAMKA 108

Query: 121 FGVRRVVVTSSISA 134
            G  +  + S    
Sbjct: 109 VGTIKRFLPSEFGH 122

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score = 43.2 bits (103), Expect = 5e-05
 Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 19/121 (15%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSD----SSHLFALPG-AGDANLRVFEADV 68
           VTG  GFIG+  ++ +L   +           D     S+   L     D      + DV
Sbjct: 8   VTGGMGFIGSNFIRYIL-EKHPDWEVINI---DKLGYGSNPANLKDLEDDPRYTFVKGDV 63

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAAKRFGV 123
            D   V   V    GV H+A+    E  VD     PE   +   V GT  +LE+ +R   
Sbjct: 64  ADYELVKELVRKVDGVVHLAA----ESHVDRSISSPE-IFLHSNVIGTYTLLESIRRENP 118

Query: 124 R 124
            
Sbjct: 119 E 119

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 32/215 (14%), Positives = 55/215 (25%), Gaps = 51/215 (23%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVL 69
           +V VTGAN  IG  LV+ L+ +        +   + D      L    D+ + V    V 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIR---HIIATARDVEKATELKSIKDSRVHVLPLTVT 61

Query: 70  DSGAVSRAVEGCKGVFH------------VASPCTLEDPVDPEK---------------- 101
              ++   V     +              V          +                   
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 102 ELILPAVQ-GTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR 160
           + +LP ++                 V+  SS    + +       F   +          
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLA---------- 171

Query: 161 KKWYPVSKT----LAEKAAWEFAEKHGVDVVAIHP 191
              Y +SK          A +  +   V VV   P
Sbjct: 172 ---YRMSKAAINMFGRTLAVDLKDD-NVLVVNFCP 202

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 25/154 (16%), Positives = 46/154 (29%), Gaps = 46/154 (29%)

Query: 11  TVCVTGANGFIGTWLVKTLL----------DNNYTSINATVFPGSDSSHLFAL------- 53
            V V G  G+IG+  V+ LL          D+   +   +    +  +    L       
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 54  PGAGDANLRVFEADVLDSGAVSRAVE---GCKGVFHVASPCTLEDPVDPEKELIL----- 105
           P   D    +   DV +   ++           V H+ +              +      
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCA-------------FLAVGESV 110

Query: 106 --PA------VQGTLNVLEAAKRFGVRRVVVTSS 131
             P       V G L +L+A       +++ +SS
Sbjct: 111 RDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSS 144

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 35/131 (26%)

Query: 14  VTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGD-ANLR-------- 62
           VTG  GFIG+  V  +L +   Y  IN             AL  +G+  N++        
Sbjct: 29  VTGGAGFIGSNFVHYMLQSYETYKIIN-----------FDALTYSGNLNNVKSIQDHPNY 77

Query: 63  VFE-ADVLDSGAVSRAVEGCK--GVFHVASPCTLEDPVD-----PEKELILPAVQGTLNV 114
            F   ++ +   +   ++      + + A+    E  VD     P        V GT+ +
Sbjct: 78  YFVKGEIQNGELLEHVIKERDVQVIVNFAA----ESHVDRSIENPI-PFYDTNVIGTVTL 132

Query: 115 LEAAKRFGVRR 125
           LE  K++   +
Sbjct: 133 LELVKKYPHIK 143

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 23/198 (11%), Positives = 53/198 (26%), Gaps = 43/198 (21%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVF--PGSDSSHLFALPGAGDANLRVFEAD 67
           E + + G  G+IG ++V+  L  ++ +        P S  S +          + + E +
Sbjct: 5   EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + +   +   ++    V                     P +   ++++ A K  G  +  
Sbjct: 65  MEEHEKMVSVLKQVDIVISALPF---------------PMISSQIHIINAIKAAGNIKRF 109

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFAEKHGVDV 186
           + S                              K   P    L +K       E   +  
Sbjct: 110 LPSDFGCEEDRI---------------------KPLPPFESVLEKKRIIRRAIEAAALPY 148

Query: 187 VAIHPATCLGPLMQPYLN 204
             +            ++N
Sbjct: 149 TYVSA----NCFGAYFVN 162

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 11 TVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
          ++ +TG N  +G  LVK LL+       +  T      +  L  L     +N+ + E D+
Sbjct: 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNH-SNIHILEIDL 81

Query: 69 LDSGAVSRAVEGCKGVFH 86
           +  A  + V   +GV  
Sbjct: 82 RNFDAYDKLVADIEGVTK 99

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 40/152 (26%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG----A 56
              ++E   + V VTG  G+IG+  V  L++N Y  +   V     +S   ++       
Sbjct: 3   AQLQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCV---VADNLSNSTYDSVARLEVLT 59

Query: 57  GDANLRVFEADVLDSGAVSR--AVEGCKGVFHVASPCTLEDPVDPEKELILPAV------ 108
              ++  +E D+ D   + +         V H A                L AV      
Sbjct: 60  K-HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAG---------------LKAVGESTQI 103

Query: 109 ---------QGTLNVLEAAKRFGVRRVVVTSS 131
                     GT+ +LE  +++ V + V +SS
Sbjct: 104 PLRYYHNNILGTVVLLELMQQYNVSKFVFSSS 135

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 40.1 bits (94), Expect = 9e-04
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 22/97 (22%)

Query: 59  ANLRVFEADVLDSGAVSRAVEGC------KGVFHVASPCTLEDPV----DPE--KELILP 106
           A + +   DV D   +++ +           V H A    L+D V      E   +++ P
Sbjct: 584 AEVSLQACDVADRETLAKVLASIPDEHPLTAVVHAA--GVLDDGVSESLTVERLDQVLRP 641

Query: 107 AVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPG 140
            V G  N+LE             V+ SS+S ++ + G
Sbjct: 642 KVDGARNLLELIDPDVAL-----VLFSSVSGVLGSGG 673

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	331
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.98
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.98
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.98
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.97
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.96
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.96
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.96
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.96
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
1spx_A	278	Short-chain reductase family member (5L265); paral	99.95
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.95
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.94
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.94
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.94
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.94
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.94
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.94
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.94
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.94
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.94
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.94
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.94
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.94
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.94
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.94
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.93
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.93
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.93
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.93
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.93
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.93
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.93
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.93
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.93
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.93
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.93
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.93
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.93
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.93
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.93
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.93
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.93
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.93
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.93
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.93
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.92
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.92
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.92
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.92
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.92
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.92
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.92
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.92
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.92
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.92
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.92
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.92
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.92
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.92
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.92
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.92
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.92
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.92
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.92
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.92
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.92
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.92
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.92
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.92
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.92
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.92
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.92
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.92
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.92
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.92
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.92
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.92
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.92
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.92
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.92
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.92
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.92
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.92
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.92
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.92
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.92
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.91
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.91
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.91
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.91
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.91
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.91
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.91
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.91
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.91
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.91
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.91
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.91
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.91
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.91
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.91
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.91
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.91
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.91
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.91
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.91
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.91
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.91
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.91
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.91
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.91
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.91
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.91
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.91
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.91
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.91
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.91
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.91
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.91
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.91
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.91
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.91
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.91
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.91
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.91
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.91
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.91
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.91
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.91
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.91
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.91
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.91
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.91
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.9
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.9
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.9
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.9
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.9
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.9
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.9
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.9
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.9
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.9
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.9
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.9
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.9
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.9
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.9
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.9
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.9
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.9
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.9
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.9
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.9
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.9
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.9
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.9
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.9
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.9
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.9
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.89
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.89
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.89
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.89
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.89
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.89
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.89
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.89
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.89
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.89
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.89
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.89
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.89
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.89
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.89
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.89
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.88
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.88
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.88
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.88
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.88
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.88
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.88
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.88
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.88
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.87
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.87
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.87
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.87
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.86
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.86
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.86
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.86
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.85
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.85
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.85
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.84
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.84
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.84
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.83
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.83
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.83
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.83
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.83
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.83
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.82
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.8
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.8
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.77
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.74
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.73
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.72
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.72
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.62
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.59
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.59
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.57
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.57
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.53
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.48
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.48
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.46
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.41
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.3
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.28
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.25
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.18
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.07
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.01
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.98
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.95
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.86
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.85
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.79
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.75
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.7
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.66
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.59
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.58
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.5
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.49
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.48
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.45
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.38
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.37
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.34
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.33
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.16
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.14
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.07
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.06
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.0
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.98
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.98
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.95
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.94
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.87
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.85
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.84
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.83
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.78
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.72
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.69
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.66
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.65
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.63
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.62
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.61
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.59
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.57
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.57
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.57
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.56
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.56
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.56
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.51
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.51
1lnq_A	336	MTHK channels, potassium channel related protein;	97.5
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.47
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.47
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.46
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.44
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.42
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.38
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.35
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.34
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.34
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.33
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.32
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.32
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.3
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.29
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.28
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.27
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.26
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.26
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.25
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.25
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.24
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.23
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.23
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.2
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.19
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.18
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.18
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.17
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.17
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.15
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.13
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.13
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.12
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.1
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	97.09
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.09
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.09
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.06
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.06
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.06
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.06
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.05
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.04
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.04
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.03
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.03
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.03
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.02
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.02
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.01
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.01
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.0
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.0
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.0
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.0
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.99
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.98
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.98
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.97
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.96
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.96
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.96
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.96
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.96
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.95
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.94
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.94
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.92
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.91
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.88
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.88
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.87
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.87
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.87
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.86
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.86
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.86
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.86
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.83
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.83
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.83
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.81
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.81
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.81
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.79
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.75
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.74
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.72
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.68
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.67
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.66
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.65
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.65
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.64
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.63
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.63
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.63
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.62
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.61
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.59
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.59
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.58
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.56
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	96.55
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	96.55
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.55
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.54
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.53
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.53
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	96.52
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.5
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.49
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.49
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.49
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.49
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.47
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.46
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.46
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.45
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.43
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	96.41
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.4
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.4
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.4
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	96.4
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.39
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	96.39
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.39
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.39
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.38
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.36

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=2.2e-47  Score=337.85  Aligned_cols=304  Identities=16%  Similarity=0.179  Sum_probs=237.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCcc--chhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--   80 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   80 (331)
                      .+||+|||||||||||++|+++|+++|  + +|++++|.....  ..+..... .. +++++.+|++|++++.+++++  
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~~~~~~~~~~~l~~~~~-~~-~~~~~~~Dl~d~~~~~~~~~~~~   98 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETY-KIINFDALTYSGNLNNVKSIQD-HP-NYYFVKGEIQNGELLEHVIKERD   98 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTE-EEEEEECCCTTCCGGGGTTTTT-CT-TEEEEECCTTCHHHHHHHHHHHT
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCc-EEEEEeccccccchhhhhhhcc-CC-CeEEEEcCCCCHHHHHHHHhhcC
Confidence            456899999999999999999999999  6 888888764222  22222211 12 899999999999999999987  


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhcc
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (331)
                      +|+|||+|+.........++...+++|+.++.+++++|++.++++|||+||. .+|+... ...+++|+++..|.     
T Consensus        99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~-~vy~~~~-~~~~~~E~~~~~p~-----  171 (346)
T 4egb_A           99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTD-EVYGSLG-KTGRFTEETPLAPN-----  171 (346)
T ss_dssp             CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEG-GGGCCCC-SSCCBCTTSCCCCC-----
T ss_pred             CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCch-HHhCCCC-cCCCcCCCCCCCCC-----
Confidence            9999999998766555566788999999999999999999999999999998 4555442 23678999877665     


Q ss_pred             CcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHH
Q 020110          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKA  237 (331)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a  237 (331)
                       +.|+.+|..+|.+++.++++++++++++||+++|||+.... ..+..++..+..+.++. .  ++..++|+|++|+|++
T Consensus       172 -~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  249 (346)
T 4egb_A          172 -SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSA  249 (346)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHH
T ss_pred             -ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHH
Confidence             48999999999999999988899999999999999987543 45667788888888766 3  4578999999999999


Q ss_pred             HHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCCCC--CCCCCCCCCccccccchHHH-HhhCCCcc-CHHHHHH
Q 020110          238 QVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLFPEFPVH--RFDGETQPGLIPCKDAAKRL-MDLGLVFT-PVEDAVR  312 (331)
Q Consensus       238 ~~~~l~~~~~~g~~~~~~-~~~s~~e~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~-~~lG~~~~-~~~~~l~  312 (331)
                      ++.++..+..+++|++++ +.+|+.|+++.+.+.+|. +.+  ..............+|++|+ +.|||+|+ +++++|+
T Consensus       250 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~  328 (346)
T 4egb_A          250 IDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGK-TKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQ  328 (346)
T ss_dssp             HHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTC-CGGGCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHHHHH
T ss_pred             HHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCC-CcccccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHHHHH
Confidence            999998877555887654 569999999999999953 222  11112223344567899999 78999995 9999999


Q ss_pred             HHHHHHHHcCC
Q 020110          313 ETVESLKAKGF  323 (331)
Q Consensus       313 ~~~~~~~~~~~  323 (331)
                      ++++||+++..
T Consensus       329 ~~~~~~~~~~~  339 (346)
T 4egb_A          329 ETVQWYEKNEE  339 (346)
T ss_dssp             HHHHHHHHCHH
T ss_pred             HHHHHHHhhhh
Confidence            99999998643

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=7.7e-47  Score=329.46  Aligned_cols=291  Identities=15%  Similarity=0.135  Sum_probs=236.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      ||+|||||||||||++|+++|+++|+ +|++++|++.... + +       +++++.+|++ .+++.++++++|+|||+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~-~-------~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a   70 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-I-N-------DYEYRVSDYT-LEDLINQLNDVDAVVHLA   70 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------------CCEEEECCCC-HHHHHHHTTTCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-C-C-------ceEEEEcccc-HHHHHHhhcCCCEEEEcc
Confidence            46999999999999999999999999 9999999843322 2 1       6889999999 999999999999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      +.....    ++...+++|+.++.+++++|++.++++|||+||. .+|+....  .+++|+++..|.      +.|+.+|
T Consensus        71 ~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~-~vyg~~~~--~~~~E~~~~~p~------~~Y~~sK  137 (311)
T 3m2p_A           71 ATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTI-SAYSDETS--LPWNEKELPLPD------LMYGVSK  137 (311)
T ss_dssp             CCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEG-GGCCCGGG--CSBCTTSCCCCS------SHHHHHH
T ss_pred             ccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH-HHhCCCCC--CCCCCCCCCCCC------chhHHHH
Confidence            976643    5678899999999999999999999999999997 55554432  678998877665      4899999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHHHHHhhcCC
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      ..+|++++.++++.+++++++||+++|||...+. ..+..++..+..+.++. .  +++.++|+|++|+|++++.++..+
T Consensus       138 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~  216 (311)
T 3m2p_A          138 LACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQE  216 (311)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcC
Confidence            9999999999988999999999999999987543 45667788888887765 3  457899999999999999999887


Q ss_pred             CCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCC-CCCCccccccchHHH-HhhCCCcc-CHHHHHHHHHHHHHHc
Q 020110          246 AASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGE-TQPGLIPCKDAAKRL-MDLGLVFT-PVEDAVRETVESLKAK  321 (331)
Q Consensus       246 ~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~-~~lG~~~~-~~~~~l~~~~~~~~~~  321 (331)
                      ...++|+++ ++.+|+.|+++.+.+.++.......... .........+|++|+ +.|||+|+ +++++|+++++|+++.
T Consensus       217 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  296 (311)
T 3m2p_A          217 KVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGL  296 (311)
T ss_dssp             TCCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC-
T ss_pred             CCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhc
Confidence            756688665 6779999999999999953321111111 223456678999999 66999996 9999999999999877


Q ss_pred             CCC
Q 020110          322 GFL  324 (331)
Q Consensus       322 ~~~  324 (331)
                      +..
T Consensus       297 ~~~  299 (311)
T 3m2p_A          297 DDV  299 (311)
T ss_dssp             ---
T ss_pred             ccC
Confidence            653

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=3e-47  Score=337.61  Aligned_cols=304  Identities=15%  Similarity=0.109  Sum_probs=240.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch-hhcCCCCC----CCcEEEEEccCCCchHHHHHhcCcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAG----DANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      ++|+|||||||||||++|+++|+++|+ +|++++|+...... ...+....    ..+++++.+|++|++++.++++++|
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  102 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD  102 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence            467999999999999999999999999 99999997654322 11110000    0189999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      +|||+|+.........++...+++|+.++.+++++|++.++++|||+||. .+|+...  ..+++|+++..|.      +
T Consensus       103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~-~vyg~~~--~~~~~E~~~~~p~------~  173 (351)
T 3ruf_A          103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASS-STYGDHP--ALPKVEENIGNPL------S  173 (351)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG-GGGTTCC--CSSBCTTCCCCCC------S
T ss_pred             EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecH-HhcCCCC--CCCCccCCCCCCC------C
Confidence            99999997544333345677899999999999999999999999999998 4554443  3688999887665      4


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHH
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAK  236 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~  236 (331)
                      .|+.+|..+|++++.++++.+++++++||+++|||+....   ...+..++.++..+.++. .  +++.++|+|++|+|+
T Consensus       174 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~  253 (351)
T 3ruf_A          174 PYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ  253 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHH
Confidence            8999999999999999988899999999999999986542   134567788888887766 3  458899999999999


Q ss_pred             HHHHhhcCC-C-CCceEEEe-ccccCHHHHHHHHHHhCCCCCC----CC-CCCCCCCCccccccchHHH-HhhCCCcc-C
Q 020110          237 AQVLLFESP-A-ASGRYLCT-NGIYQFGDFAERVSKLFPEFPV----HR-FDGETQPGLIPCKDAAKRL-MDLGLVFT-P  306 (331)
Q Consensus       237 a~~~~l~~~-~-~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~k~-~~lG~~~~-~  306 (331)
                      +++.++... . .+++|+++ ++.+|+.|+++.+.+.++..+.    +. .............+|++|+ +.|||+|+ +
T Consensus       254 a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~  333 (351)
T 3ruf_A          254 MNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRPNIK  333 (351)
T ss_dssp             HHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCCCCCC
T ss_pred             HHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCCCCCC
Confidence            999998873 3 34478765 6779999999999999854211    11 1111123345678999999 67999995 9


Q ss_pred             HHHHHHHHHHHHHHc
Q 020110          307 VEDAVRETVESLKAK  321 (331)
Q Consensus       307 ~~~~l~~~~~~~~~~  321 (331)
                      ++++|+++++||+++
T Consensus       334 ~~~~l~~~~~~~~~~  348 (351)
T 3ruf_A          334 IREGLRLSMPWYVRF  348 (351)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999999875

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-46  Score=327.51  Aligned_cols=295  Identities=19%  Similarity=0.194  Sum_probs=230.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      ||+|||||||||||++|+++|+++|+ .|.+..|+.........       +++++.+|+++ +++.++++++|+|||+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~-~v~~~~~~~~~~~~~~~-------~~~~~~~Dl~~-~~~~~~~~~~d~vih~a   71 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNEEFVNE-------AARLVKADLAA-DDIKDYLKGAEEVWHIA   71 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSC-EEEECCCSSCCGGGSCT-------TEEEECCCTTT-SCCHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEcCCCCChhhcCC-------CcEEEECcCCh-HHHHHHhcCCCEEEECC
Confidence            57999999999999999999999996 66655444433222211       78999999999 88999999999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      +.........++...+++|+.++.++++++++.++++|||+||. .+|+...  ..+++|+++..|.      +.|+.+|
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~-~vyg~~~--~~~~~E~~~~~~~------~~Y~~sK  142 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTS-TVYGEAK--VIPTPEDYPTHPI------SLYGASK  142 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCG-GGGCSCS--SSSBCTTSCCCCC------SHHHHHH
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCch-HHhCcCC--CCCCCCCCCCCCC------CHHHHHH
Confidence            97665556677889999999999999999999999999999997 5555443  2678888776654      4899999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCC-CCc---cCcCCCCceeHHHHHHHHHHhhcC
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDT---QEYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      ..+|.+++.++++.+++++++||+++|||+...  ..+..++.++..+. ++.   .+++.++|+|++|+|++++.++..
T Consensus       143 ~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  220 (313)
T 3ehe_A          143 LACEALIESYCHTFDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG  220 (313)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc
Confidence            999999999998899999999999999998654  45666777777663 332   345789999999999999999985


Q ss_pred             CCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCC---CCCCccccccchHHHHhhCCCcc-CHHHHHHHHHHHHH
Q 020110          245 PAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGE---TQPGLIPCKDAAKRLMDLGLVFT-PVEDAVRETVESLK  319 (331)
Q Consensus       245 ~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~k~~~lG~~~~-~~~~~l~~~~~~~~  319 (331)
                      ....++|+++ ++++|+.|+++.+++.++..+.......   .........+|++|+++|||+|+ +++++|+++++|++
T Consensus       221 ~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~  300 (313)
T 3ehe_A          221 DERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLV  300 (313)
T ss_dssp             CSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHH
T ss_pred             CCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence            5455588765 5679999999999999943221111111   11233456789999977999994 99999999999998


Q ss_pred             HcCC
Q 020110          320 AKGF  323 (331)
Q Consensus       320 ~~~~  323 (331)
                      ++..
T Consensus       301 ~~~~  304 (313)
T 3ehe_A          301 EDLD  304 (313)
T ss_dssp             HHHH
T ss_pred             hCcc
Confidence            8653

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=5.9e-46  Score=327.49  Aligned_cols=315  Identities=34%  Similarity=0.608  Sum_probs=232.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh---cCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF---ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      ++|+||||||+||||++|+++|+++|+ +|+++.|+........   .+..... +++++.+|++|++++.++++++|+|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~d~V   81 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGY-TVRATVRDPTNVKKVKHLLDLPKAET-HLTLWKADLADEGSFDEAIKGCTGV   81 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCTTCHHHHHHHHTSTTHHH-HEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEECCcchhHHHHHHHhcccCCC-eEEEEEcCCCCHHHHHHHHcCCCEE
Confidence            467999999999999999999999999 9999998765322111   1111001 5889999999999999999999999


Q ss_pred             EEcccCCCCCCCCCch-hhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCCCCccccCCCCCChhhh--h-c
Q 020110           85 FHVASPCTLEDPVDPE-KELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC--K-S  159 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~--~-~  159 (331)
                      ||+|+....  ...++ ...+++|+.++.+++++|++.+ +++|||+||.+++|+.... ..+++|+++..+...  . .
T Consensus        82 ih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~-~~~~~E~~~~~~~~~~~~~~  158 (337)
T 2c29_D           82 FHVATPMDF--ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ-LPVYDESCWSDMEFCRAKKM  158 (337)
T ss_dssp             EECCCCCCS--SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSC-CSEECTTCCCCHHHHHHHCC
T ss_pred             EEeccccCC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCC-CcccCcccCCchhhhcccCC
Confidence            999986532  22233 4589999999999999998887 8999999998767765432 245778765443221  1 1


Q ss_pred             cCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc-CCCCceeHHHHHHHH
Q 020110          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY-HWLGAVPVKDVAKAQ  238 (331)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~D~a~a~  238 (331)
                      +...|+.+|..+|.+++.++++++++++++||+++|||..................|....++. ....|+|++|+|+++
T Consensus       159 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~  238 (337)
T 2c29_D          159 TAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAH  238 (337)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHH
Confidence            2346999999999999998877899999999999999986543222111111123343322221 234599999999999


Q ss_pred             HHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHHHhhCCCc-cCHHHHHHHHHHH
Q 020110          239 VLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVF-TPVEDAVRETVES  317 (331)
Q Consensus       239 ~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~-~~~~~~l~~~~~~  317 (331)
                      +.+++.+...|.|++++...|+.|+++.+.+.+|...++..............+|++|+++|||+| .+++++|+++++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~  318 (337)
T 2c29_D          239 IYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDT  318 (337)
T ss_dssp             HHHHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCCSCCTTCCTTCCCCEECCHHHHHHTCCCCCCHHHHHHHHHHH
T ss_pred             HHHhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCcccCCCccccccHHHHHHcCCCcCCCHHHHHHHHHHH
Confidence            999987666678888887899999999999988654444322221223345678999998899999 5999999999999


Q ss_pred             HHHcCCCCcc
Q 020110          318 LKAKGFLGQH  327 (331)
Q Consensus       318 ~~~~~~~~~~  327 (331)
                      +++.+.++.+
T Consensus       319 ~~~~~~~~~~  328 (337)
T 2c29_D          319 CRAKGLLPPS  328 (337)
T ss_dssp             HHHTTSSCSC
T ss_pred             HHHcCCCCcc
Confidence            9999887653

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=2.2e-45  Score=321.84  Aligned_cols=310  Identities=35%  Similarity=0.569  Sum_probs=226.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEec-CCCc---cchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSD---SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      |+|||||||||||++++++|+++|+ +|+++.| ++..   ...+..+..... +++++.+|++|++++.++++++|+||
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGY-SVNTTIRADPERKRDVSFLTNLPGASE-KLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCCC----CCCHHHHTSTTHHH-HEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCC-EEEEEEeCCccchhHHHHHHhhhccCC-ceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            6899999999999999999999999 9999988 5422   111211111011 57889999999999999999999999


Q ss_pred             EcccCCCCCCCCCc-hhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceeccCCCCCCccccCCCCCChhhh--hccC
Q 020110           86 HVASPCTLEDPVDP-EKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC--KSRK  161 (331)
Q Consensus        86 h~a~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~--~~~~  161 (331)
                      |+|+...  ....+ ....+++|+.++.+++++|++. ++++|||+||.+++++.+.. ..+++|+++..+.+.  ..+.
T Consensus        80 h~A~~~~--~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~p~  156 (322)
T 2p4h_X           80 HTASPID--FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD-KDVLDESDWSDVDLLRSVKPF  156 (322)
T ss_dssp             ECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC-CSEECTTCCCCHHHHHHHCCT
T ss_pred             EcCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC-CeecCCccccchhhhcccCcc
Confidence            9997542  12222 2458999999999999999988 78999999998766654432 356788775543221  1122


Q ss_pred             c-chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHH
Q 020110          162 K-WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL  240 (331)
Q Consensus       162 ~-~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~  240 (331)
                      . .|+.+|..+|.++..++++++++++++||+++|||............+.+...|.....++..++|+|++|+|++++.
T Consensus       157 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~  236 (322)
T 2p4h_X          157 GWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIY  236 (322)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHH
Confidence            2 599999999999999887789999999999999997643322222222233445433334333489999999999999


Q ss_pred             hhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCC-CCCCCCccccccchHHHHhhCCCcc-CHHHHHHHHHHHH
Q 020110          241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFD-GETQPGLIPCKDAAKRLMDLGLVFT-PVEDAVRETVESL  318 (331)
Q Consensus       241 ~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~lG~~~~-~~~~~l~~~~~~~  318 (331)
                      ++..+...|.|+++++.+|+.|+++.+.+.++..+++... ...........+|++|+++|||+|+ +++++|+++++|+
T Consensus       237 ~~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~  316 (322)
T 2p4h_X          237 LLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCC  316 (322)
T ss_dssp             HHHSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTCCCEECCEECCHHHHHTTCCCCCCHHHHHHHHHHHH
T ss_pred             HhhCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCCCCccccCCCCCcceecccHHHHHhCCccCCCHHHHHHHHHHHH
Confidence            9987655677887778899999999999988654444321 1111112456789999977999995 9999999999999


Q ss_pred             HHcCCC
Q 020110          319 KAKGFL  324 (331)
Q Consensus       319 ~~~~~~  324 (331)
                      ++++.+
T Consensus       317 ~~~~~~  322 (322)
T 2p4h_X          317 KEKGYL  322 (322)
T ss_dssp             HHHTCC
T ss_pred             HhcCCC
Confidence            987653

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=6.6e-46  Score=323.75  Aligned_cols=292  Identities=21%  Similarity=0.180  Sum_probs=233.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+|||||||||||++|+++|+++|+ +|++++|+..........      +++++.+|+.|.+ +.+++++ |+|||+|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~   71 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDNLSSGRREFVNP------SAELHVRDLKDYS-WGAGIKG-DVVFHFAA   71 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSCCGGGSCT------TSEEECCCTTSTT-TTTTCCC-SEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCCchhhcCC------CceEEECccccHH-HHhhcCC-CEEEECCC
Confidence            4899999999999999999999999 999999876554333211      7889999999998 8888887 99999999


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (331)
                      .........++...+++|+.++.+++++|++.++++|||+||. .+|+...  ..+++|+++..|.      +.|+.+|.
T Consensus        72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~-~vyg~~~--~~~~~e~~~~~p~------~~Y~~sK~  142 (312)
T 3ko8_A           72 NPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSS-TVYGDAD--VIPTPEEEPYKPI------SVYGAAKA  142 (312)
T ss_dssp             SCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEG-GGGCSCS--SSSBCTTSCCCCC------SHHHHHHH
T ss_pred             CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcH-HHhCCCC--CCCCCCCCCCCCC------ChHHHHHH
Confidence            7665555666788999999999999999999999999999997 4555443  2678888776655      48999999


Q ss_pred             HHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCC-CCc-c--CcCCCCceeHHHHHHHHHHhhcC-
Q 020110          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDT-Q--EYHWLGAVPVKDVAKAQVLLFES-  244 (331)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~-~--~~~~~~~v~v~D~a~a~~~~l~~-  244 (331)
                      .+|.+++.++++.+++++++||+++|||+...  ..+..++.++..+. ++. .  +++.++|+|++|+|++++.+++. 
T Consensus       143 ~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  220 (312)
T 3ko8_A          143 AGEVMCATYARLFGVRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKF  220 (312)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhc
Confidence            99999999998889999999999999998654  34556777777664 322 3  44789999999999999999987 


Q ss_pred             --CC-CCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCC-CC------CCCCccccccchHHH-HhhCCCcc-CHHHHH
Q 020110          245 --PA-ASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFD-GE------TQPGLIPCKDAAKRL-MDLGLVFT-PVEDAV  311 (331)
Q Consensus       245 --~~-~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~k~-~~lG~~~~-~~~~~l  311 (331)
                        .. ..++|+++ ++.+|+.|+++.+.+.++..+ +... ..      .........+|++|+ +.|||+|+ +++++|
T Consensus       221 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l  299 (312)
T 3ko8_A          221 EEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRP-EIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAV  299 (312)
T ss_dssp             HHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCC-EEEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHH
T ss_pred             cccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCC-ceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHH
Confidence              33 34478765 567999999999999984322 1111 00      112344567899999 88999995 999999


Q ss_pred             HHHHHHHHHcC
Q 020110          312 RETVESLKAKG  322 (331)
Q Consensus       312 ~~~~~~~~~~~  322 (331)
                      +++++|+++++
T Consensus       300 ~~~~~~~~~~~  310 (312)
T 3ko8_A          300 KKTAEDLAKEL  310 (312)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHhhh
Confidence            99999999875

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.8e-46  Score=335.25  Aligned_cols=304  Identities=17%  Similarity=0.263  Sum_probs=235.7

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCC-CchHHHHHhcCccE
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-DSGAVSRAVEGCKG   83 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~   83 (331)
                      ..+||+|||||||||||++|+++|+++ |+ +|++++|+......+...    . +++++.+|++ |.+.+.++++++|+
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~----~-~v~~~~~Dl~~d~~~~~~~~~~~d~   94 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKH----E-RMHFFEGDITINKEWVEYHVKKCDV   94 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGS----T-TEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccC----C-CeEEEeCccCCCHHHHHHHhccCCE
Confidence            335789999999999999999999998 89 999999987665444321    1 8999999999 99999999999999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhh-hccCc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC-KSRKK  162 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~  162 (331)
                      |||+|+......+..++...+++|+.++.+++++|++.+ ++|||+||. .+|+....  .+++|++...+..+ ..+.+
T Consensus        95 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~-~vyg~~~~--~~~~e~~~~~~~~p~~~p~~  170 (372)
T 3slg_A           95 ILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTS-EVYGMCAD--EQFDPDASALTYGPINKPRW  170 (372)
T ss_dssp             EEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCG-GGGBSCCC--SSBCTTTCCEEECCTTCTTH
T ss_pred             EEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcH-HHhCCCCC--CCCCccccccccCCCCCCCC
Confidence            999999765433334567889999999999999999999 999999997 55655432  57788775421111 12334


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCC-------CCChhHHHHHHHHcCCCCc-c--CcCCCCceeHH
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-------YLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVK  232 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~  232 (331)
                      .|+.+|..+|++++.++++ +++++++||+++|||+...       ....+..++..+..+.++. .  +++.++|+|++
T Consensus       171 ~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  249 (372)
T 3slg_A          171 IYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVD  249 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHH
T ss_pred             cHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHH
Confidence            7999999999999998866 9999999999999998643       1234567778888887765 3  45889999999


Q ss_pred             HHHHHHHHhhcCCC---CCceEEEec--cccCHHHHHHHHHHhCCCCCCCCCC----C------------CCCCCccccc
Q 020110          233 DVAKAQVLLFESPA---ASGRYLCTN--GIYQFGDFAERVSKLFPEFPVHRFD----G------------ETQPGLIPCK  291 (331)
Q Consensus       233 D~a~a~~~~l~~~~---~~g~~~~~~--~~~s~~e~~~~i~~~~~~~~~~~~~----~------------~~~~~~~~~~  291 (331)
                      |+|++++.++..+.   .+++|++++  +.+|+.|+++.+.+.++. +.+...    .            ..........
T Consensus       250 Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (372)
T 3slg_A          250 DGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAE-FPEYADSAKRVKLVETTSGAYYGNGYQDVQNRV  328 (372)
T ss_dssp             HHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHH-CTTTHHHHHTCCEEEC-------------CCCC
T ss_pred             HHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCC-CcccccccccceeeeccccccccCCccccceee
Confidence            99999999998874   345787765  479999999999998842 111100    0            0001334567


Q ss_pred             cchHHH-HhhCCCcc-CHHHHHHHHHHHHHHc
Q 020110          292 DAAKRL-MDLGLVFT-PVEDAVRETVESLKAK  321 (331)
Q Consensus       292 ~~~~k~-~~lG~~~~-~~~~~l~~~~~~~~~~  321 (331)
                      .|++|+ +.|||+|+ +++++|+++++|++++
T Consensus       329 ~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  360 (372)
T 3slg_A          329 PKIENTMQELGWAPQFTFDDALRQIFEAYRGH  360 (372)
T ss_dssp             BCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred             cCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence            899999 77999995 9999999999999764

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=1.7e-45  Score=324.74  Aligned_cols=310  Identities=34%  Similarity=0.571  Sum_probs=225.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh---hcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL---FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      +|+|||||||||||++|+++|+++|+ +|+++.|+.......   ..+. ... +++++.+|++|++++.++++++|+||
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~-~~~~~~~Dl~d~~~~~~~~~~~D~Vi   85 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGY-AVNTTVRDPDNQKKVSHLLELQ-ELG-DLKIFRADLTDELSFEAPIAGCDFVF   85 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTC-EEEEEESCTTCTTTTHHHHHHG-GGS-CEEEEECCTTTSSSSHHHHTTCSEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCcchhhhHHHHHhcC-CCC-cEEEEecCCCChHHHHHHHcCCCEEE
Confidence            47899999999999999999999999 999988876432211   1111 011 68899999999999999999999999


Q ss_pred             EcccCCCCCCCCCch-hhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCC-CCccccCCCCCChhh--hhcc
Q 020110           86 HVASPCTLEDPVDPE-KELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEY--CKSR  160 (331)
Q Consensus        86 h~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~-~~~~~~E~~~~~~~~--~~~~  160 (331)
                      |+|+....  ...++ .+.+++|+.++.+++++|++.+ +++|||+||.+++++.+.. ...+++|+++..+..  +..+
T Consensus        86 h~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  163 (338)
T 2rh8_A           86 HVATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKP  163 (338)
T ss_dssp             EESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------C
T ss_pred             EeCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCC
Confidence            99986532  12223 3489999999999999999985 8999999998666643321 113678876543221  1111


Q ss_pred             C-cchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccC--------cCCCCceeH
Q 020110          161 K-KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE--------YHWLGAVPV  231 (331)
Q Consensus       161 ~-~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~v~v  231 (331)
                      . ..|+.+|..+|.+++.+++++|++++++||+++|||............+.....|....++        +..++|+|+
T Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v  243 (338)
T 2rh8_A          164 PTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHV  243 (338)
T ss_dssp             CCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEH
Confidence            1 2599999999999999887789999999999999998654332222222222344322111        123489999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHHHhhCCCcc-CHHHH
Q 020110          232 KDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVFT-PVEDA  310 (331)
Q Consensus       232 ~D~a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~-~~~~~  310 (331)
                      +|+|++++.+++.+...|.|++++...|+.|+++.+.+.++..++|........ .....+|++|+++|||+|+ +++++
T Consensus       244 ~Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~d~~k~~~lG~~p~~~l~~g  322 (338)
T 2rh8_A          244 EDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPP-KSKLIISSEKLVKEGFSFKYGIEEI  322 (338)
T ss_dssp             HHHHHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCCCCCTTSCS-SCSCCCCCHHHHHHTCCCSCCHHHH
T ss_pred             HHHHHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCc-CcceeechHHHHHhCCCCCCCHHHH
Confidence            999999999998766667898888789999999999998864444332221111 1236789999977999995 99999


Q ss_pred             HHHHHHHHHHcCCC
Q 020110          311 VRETVESLKAKGFL  324 (331)
Q Consensus       311 l~~~~~~~~~~~~~  324 (331)
                      |+++++|+++++.+
T Consensus       323 l~~~~~~~~~~~~~  336 (338)
T 2rh8_A          323 YDESVEYFKAKGLL  336 (338)
T ss_dssp             HHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHcCCC
Confidence            99999999988765

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.5e-45  Score=326.13  Aligned_cols=293  Identities=18%  Similarity=0.207  Sum_probs=234.0

Q ss_pred             cccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      +..++|+|||||||||||++|+++|+++|+ +|++++|++..     .       +++++.+|+.|.+++.++++++|+|
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-----~-------~~~~~~~Dl~d~~~~~~~~~~~d~v   81 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPSG-----T-------GGEEVVGSLEDGQALSDAIMGVSAV   81 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCCS-----S-------CCSEEESCTTCHHHHHHHHTTCSEE
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCC-----C-------CccEEecCcCCHHHHHHHHhCCCEE
Confidence            344568999999999999999999999999 99999998654     1       6788999999999999999999999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcch
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (331)
                      ||+|+.....  .......+++|+.++.+++++|++.++++|||+||. .+|+.......+++|+++..|.      +.|
T Consensus        82 ih~A~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~-~vyg~~~~~~~~~~E~~~~~~~------~~Y  152 (347)
T 4id9_A           82 LHLGAFMSWA--PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSG-EVYPENRPEFLPVTEDHPLCPN------SPY  152 (347)
T ss_dssp             EECCCCCCSS--GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG-GGTTTTSCSSSSBCTTSCCCCC------SHH
T ss_pred             EECCcccCcc--hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCH-HHhCCCCCCCCCcCCCCCCCCC------ChH
Confidence            9999976542  223478899999999999999999999999999997 5555522224678998876655      489


Q ss_pred             hHHHHHHHHHHHHHHHHcCCeEEEEcCCccc-------------CCCCCC----------CCChhHHHHHHHHcCCCCc-
Q 020110          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCL-------------GPLMQP----------YLNASCAVLQQLLQGSKDT-  220 (331)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~-------------G~~~~~----------~~~~~~~~~~~~~~~~~~~-  220 (331)
                      +.+|..+|++++.++++.+++++++||+++|             ||+...          ....+..++..+..+.++. 
T Consensus       153 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (347)
T 4id9_A          153 GLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHI  232 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEE
T ss_pred             HHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEE
Confidence            9999999999999998899999999999999             776432          1234556677777777655 


Q ss_pred             --cCcCCCCc----eeHHHHHHHHHHhhcCCC-CCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCcccccc
Q 020110          221 --QEYHWLGA----VPVKDVAKAQVLLFESPA-ASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKD  292 (331)
Q Consensus       221 --~~~~~~~~----v~v~D~a~a~~~~l~~~~-~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  292 (331)
                        .+++.++|    +|++|+|++++.++..+. .+++|+++ ++.+|+.|+++.+.+.++ .+.+......  ......+
T Consensus       233 ~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g-~~~~~~~~p~--~~~~~~~  309 (347)
T 4id9_A          233 LARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTG-LPIVTVDFPG--DGVYYHT  309 (347)
T ss_dssp             EEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHC-CCEEEEECSS--CCCBCCB
T ss_pred             eCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhC-CCCceeeCCC--ccccccc
Confidence              34578899    999999999999999874 44588765 567999999999999994 3333221111  1226788


Q ss_pred             chHHH-HhhCCCcc-CHHHHHHHHHHHHHHcC
Q 020110          293 AAKRL-MDLGLVFT-PVEDAVRETVESLKAKG  322 (331)
Q Consensus       293 ~~~k~-~~lG~~~~-~~~~~l~~~~~~~~~~~  322 (331)
                      |++|+ +.|||+|+ +++++|+++++|++++.
T Consensus       310 d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~  341 (347)
T 4id9_A          310 SNERIRNTLGFEAEWTMDRMLEEAATARRQRL  341 (347)
T ss_dssp             CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence            99999 77999995 99999999999998764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=4.9e-45  Score=322.13  Aligned_cols=304  Identities=17%  Similarity=0.146  Sum_probs=232.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc--CccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   85 (331)
                      +|+|||||||||||++++++|+++|+ +|++++|+......... +....+.++.++.+|++|++++.++++  ++|+||
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            46999999999999999999999999 99999997655432221 100001168899999999999999998  899999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      |+|+..........+...++.|+.++.++++++++.++++|||+||. .+|+...  ..+++|+++..|.      +.|+
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~-~~~g~~~--~~~~~e~~~~~~~------~~Y~  154 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSA-TVYGVPE--RSPIDETFPLSAT------NPYG  154 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG-GGBCSCS--SSSBCTTSCCBCS------SHHH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecc-eEecCCC--CCCCCCCCCCCCC------ChhH
Confidence            99997654323344568899999999999999999999999999997 4555444  3678898876654      4899


Q ss_pred             HHHHHHHHHHHHHHHHcC-CeEEEEcCCcccCCCCCC------C--CChhHHHHHHHHcCC--CCc---------cCcCC
Q 020110          166 VSKTLAEKAAWEFAEKHG-VDVVAIHPATCLGPLMQP------Y--LNASCAVLQQLLQGS--KDT---------QEYHW  225 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~-~~~~~lR~~~v~G~~~~~------~--~~~~~~~~~~~~~~~--~~~---------~~~~~  225 (331)
                      .+|..+|.+++.++++.+ ++++++||+++|||....      .  ...+..++.+...+.  ++.         .+++.
T Consensus       155 ~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  234 (341)
T 3enk_A          155 QTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGV  234 (341)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCE
T ss_pred             HHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCee
Confidence            999999999999987875 999999999999996421      0  122333444444443  221         24578


Q ss_pred             CCceeHHHHHHHHHHhhcCC---CCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCC-CCCCCCccccccchHHH-Hh
Q 020110          226 LGAVPVKDVAKAQVLLFESP---AASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFD-GETQPGLIPCKDAAKRL-MD  299 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~---~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~-~~  299 (331)
                      ++|+|++|+|++++.++...   ..+++|+++ ++++|+.|+++.+.+.++ .+.+... ............|++|+ +.
T Consensus       235 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~  313 (341)
T 3enk_A          235 RDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASG-RAVPYELVARRPGDVAECYANPAAAAET  313 (341)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHC-SCCCEEEECCCTTCCSEECBCCHHHHHH
T ss_pred             EeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhC-CCcceeeCCCCCCCccccccCHHHHHHH
Confidence            99999999999999998762   344578774 677999999999999984 3333221 12223445677899999 78


Q ss_pred             hCCCc-cCHHHHHHHHHHHHHHcCC
Q 020110          300 LGLVF-TPVEDAVRETVESLKAKGF  323 (331)
Q Consensus       300 lG~~~-~~~~~~l~~~~~~~~~~~~  323 (331)
                      |||+| ++++++|+++++|++++..
T Consensus       314 lG~~p~~~l~~~l~~~~~~~~~~~~  338 (341)
T 3enk_A          314 IGWKAERDLERMCADHWRWQENNPR  338 (341)
T ss_dssp             HCCCCCCCHHHHHHHHHHHHHHSTT
T ss_pred             cCCCCCCCHHHHHHHHHHHHHhcCc
Confidence            99999 6999999999999998753

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.6e-44  Score=318.91  Aligned_cols=300  Identities=20%  Similarity=0.238  Sum_probs=228.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +||+|||||||||||++|+++|+++|+ +|++++|++.....+...      +++++.+|++|++++.++++++|+|||+
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~------~~~~~~~Dl~d~~~~~~~~~~~d~vih~   84 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYL------EPECRVAEMLDHAGLERALRGLDGVIFS   84 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGG------CCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccC------CeEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            356999999999999999999999999 999999987654433321      6889999999999999999999999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |+....  +..++...+++|+.++.+++++|++.++++|||+||.++ |+.......+ +|+++..|...  ..+.|+.+
T Consensus        85 a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~-~~~~~~~~~~-~E~~~~~p~~~--~~~~Y~~s  158 (342)
T 2x4g_A           85 AGYYPS--RPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYA-MPRHPQGLPG-HEGLFYDSLPS--GKSSYVLC  158 (342)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGG-SCCCTTSSCB-CTTCCCSSCCT--TSCHHHHH
T ss_pred             CccCcC--CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHh-hCcCCCCCCC-CCCCCCCcccc--ccChHHHH
Confidence            996542  334567889999999999999999999999999999855 4332211134 88887666100  12489999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC-CCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM-QPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      |..+|.+++.+++. +++++++||+.+|||.. .+.   +..++..+..|.....++..++|+|++|+|++++.++..+.
T Consensus       159 K~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  234 (342)
T 2x4g_A          159 KWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPT---TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGR  234 (342)
T ss_dssp             HHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCS---TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHhhc-CCcEEEEeCCceECCCCcccc---HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCC
Confidence            99999999998876 99999999999999986 321   33556666677655456788999999999999999998766


Q ss_pred             CCceEEEeccccCHHHHHHHHHHhCCCCCCCC-CC------------------C-------C-CCCCccccccchHHH-H
Q 020110          247 ASGRYLCTNGIYQFGDFAERVSKLFPEFPVHR-FD------------------G-------E-TQPGLIPCKDAAKRL-M  298 (331)
Q Consensus       247 ~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~-~~------------------~-------~-~~~~~~~~~~~~~k~-~  298 (331)
                      .+++|++++..+|+.|+++.+.+.++. +.+. .+                  .       . .........+|++|+ +
T Consensus       235 ~g~~~~v~~~~~s~~e~~~~i~~~~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  313 (342)
T 2x4g_A          235 IGERYLLTGHNLEMADLTRRIAELLGQ-PAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKARE  313 (342)
T ss_dssp             TTCEEEECCEEEEHHHHHHHHHHHHTC-CCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHH
T ss_pred             CCceEEEcCCcccHHHHHHHHHHHhCC-CCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHH
Confidence            555887755449999999999999843 2221 00                  0       0 001124567899999 6


Q ss_pred             hhCC-CccCHHHHHHHHHHHHHHcCCCC
Q 020110          299 DLGL-VFTPVEDAVRETVESLKAKGFLG  325 (331)
Q Consensus       299 ~lG~-~~~~~~~~l~~~~~~~~~~~~~~  325 (331)
                      .||| +|++++++|+++++|+++++.++
T Consensus       314 ~lG~~~p~~~~~~l~~~~~~~~~~g~~~  341 (342)
T 2x4g_A          314 ELGFFSTTALDDTLLRAIDWFRDNGYFN  341 (342)
T ss_dssp             HHCCCCCSCHHHHHHHHHHHHHHTTCCC
T ss_pred             hCCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999 99999999999999999998764

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=9.8e-45  Score=321.57  Aligned_cols=305  Identities=16%  Similarity=0.111  Sum_probs=234.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcC---CCC-CCCcEEEEEccCCCchHHHHHhcCc
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFAL---PGA-GDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~---~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      .+||+|||||||||||++|+++|+++|+ +|++++|+.... ..+..+   ... ...+++++.+|++|.+++.++++++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  103 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV  103 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence            3578999999999999999999999999 999999976432 111110   000 0017899999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccC
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (331)
                      |+|||+|+.........++...+++|+.++.+++++|++.++++|||+||.++ |+...  ..+++|+++..|.      
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~-~~~~~--~~~~~E~~~~~~~------  174 (352)
T 1sb8_A          104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSST-YGDHP--GLPKVEDTIGKPL------  174 (352)
T ss_dssp             SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGG-GTTCC--CSSBCTTCCCCCC------
T ss_pred             CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHh-cCCCC--CCCCCCCCCCCCC------
Confidence            99999999754211223467789999999999999999999999999999854 44332  2578898876554      


Q ss_pred             cchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHH
Q 020110          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVA  235 (331)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a  235 (331)
                      +.|+.+|..+|.+++.++++.+++++++||+++|||.....   ...+..++..+..+.++. .  +++.++|+|++|+|
T Consensus       175 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva  254 (352)
T 1sb8_A          175 SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV  254 (352)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHH
Confidence            48999999999999999888899999999999999986432   134556677777777654 3  44788999999999


Q ss_pred             HHHHHhhcCC-C-CCceEEEe-ccccCHHHHHHHHHHhC---CCCCC--CCCCCCCCCCccccccchHHH-HhhCCCc-c
Q 020110          236 KAQVLLFESP-A-ASGRYLCT-NGIYQFGDFAERVSKLF---PEFPV--HRFDGETQPGLIPCKDAAKRL-MDLGLVF-T  305 (331)
Q Consensus       236 ~a~~~~l~~~-~-~~g~~~~~-~~~~s~~e~~~~i~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~  305 (331)
                      ++++.++... . .+++|+++ ++.+|+.|+++.+.+.+   +....  +.+............+|++|+ +.|||+| +
T Consensus       255 ~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  334 (352)
T 1sb8_A          255 QANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKY  334 (352)
T ss_dssp             HHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCC
T ss_pred             HHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCCC
Confidence            9999888763 2 34478775 56799999999999988   43211  111111112334567899999 7799999 5


Q ss_pred             CHHHHHHHHHHHHHHc
Q 020110          306 PVEDAVRETVESLKAK  321 (331)
Q Consensus       306 ~~~~~l~~~~~~~~~~  321 (331)
                      +++++|+++++|++++
T Consensus       335 ~~~e~l~~~~~~~~~~  350 (352)
T 1sb8_A          335 DVSAGVALAMPWYIMF  350 (352)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHh
Confidence            9999999999999864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=3.5e-45  Score=325.65  Aligned_cols=302  Identities=16%  Similarity=0.096  Sum_probs=234.9

Q ss_pred             CCccc-ccCCCeEEEeCcchHHHHHHHHHHHH--CCCCEEEEEecCCCccc-------hhhcCCCCCCCcEEEEEccCCC
Q 020110            1 MASEA-EKEEETVCVTGANGFIGTWLVKTLLD--NNYTSINATVFPGSDSS-------HLFALPGAGDANLRVFEADVLD   70 (331)
Q Consensus         1 m~~~~-~~~~~~vlVtGatG~iG~~l~~~L~~--~g~~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~Dl~~   70 (331)
                      |..|+ ..++|+|||||||||||++|+++|++  .|+ +|++++|+.....       .+.......+.++.++.+|++|
T Consensus         1 M~~~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   79 (362)
T 3sxp_A            1 MRYIDDELENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINN   79 (362)
T ss_dssp             CCSSSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTC
T ss_pred             CcccchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCC
Confidence            44443 44568999999999999999999999  999 9999999664110       0000000011167899999999


Q ss_pred             chHHHHH-hcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           71 SGAVSRA-VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        71 ~~~~~~~-~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                      ++++.++ ..++|+|||+|+....  ...++...+++|+.++.+++++|++.+++ |||+||. .+|+...   .+++|+
T Consensus        80 ~~~~~~~~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~-~vyg~~~---~~~~E~  152 (362)
T 3sxp_A           80 PLDLRRLEKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSA-GVYGNTK---APNVVG  152 (362)
T ss_dssp             HHHHHHHTTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEG-GGGCSCC---SSBCTT
T ss_pred             HHHHHHhhccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcH-HHhCCCC---CCCCCC
Confidence            9999998 7889999999996543  44667899999999999999999999876 9999996 5565443   378898


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHHHHHcCCCCc-c--Cc
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDT-Q--EY  223 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~  223 (331)
                      ++..|.      +.|+.+|..+|.+++.++.+  ++++++||+++|||+....   ...+..++..+..+.++. .  ++
T Consensus       153 ~~~~p~------~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  224 (362)
T 3sxp_A          153 KNESPE------NVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGE  224 (362)
T ss_dssp             SCCCCS------SHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGC
T ss_pred             CCCCCC------ChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCC
Confidence            877665      48999999999999987644  8999999999999986432   134567777888887655 2  44


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCC-C-CCCccccccchHHH-Hh
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGE-T-QPGLIPCKDAAKRL-MD  299 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~k~-~~  299 (331)
                      +.++|+|++|+|++++.++..+. .|+|+++ ++++|+.|+++.+.+.++  +.+....+ . ........+|++|+ +.
T Consensus       225 ~~~~~i~v~Dva~ai~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g--~~~~~~~~~~~~~~~~~~~~d~~k~~~~  301 (362)
T 3sxp_A          225 QLRDFVYIEDVIQANVKAMKAQK-SGVYNVGYSQARSYNEIVSILKEHLG--DFKVTYIKNPYAFFQKHTQAHIEPTILD  301 (362)
T ss_dssp             CEEECEEHHHHHHHHHHHTTCSS-CEEEEESCSCEEEHHHHHHHHHHHHC--CCEEECCC-------CCCCBCCHHHHHH
T ss_pred             eEEccEEHHHHHHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHcC--CCceEECCCCCcCcccceecCHHHHHHH
Confidence            78999999999999999998775 4588774 677999999999999996  32222111 1 23455678999999 88


Q ss_pred             hCCCcc-CHHHHHHHHHHHHHHc
Q 020110          300 LGLVFT-PVEDAVRETVESLKAK  321 (331)
Q Consensus       300 lG~~~~-~~~~~l~~~~~~~~~~  321 (331)
                      |||+|+ +++++|+++++|+++.
T Consensus       302 lG~~p~~~l~e~l~~~~~~~~~~  324 (362)
T 3sxp_A          302 LDYTPLYDLESGIKDYLPHIHAI  324 (362)
T ss_dssp             HCCCCCCCHHHHHHHHHHHHTCC
T ss_pred             hCCCCCCCHHHHHHHHHHHHHHH
Confidence            999995 9999999999999764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=8.3e-45  Score=318.03  Aligned_cols=295  Identities=18%  Similarity=0.169  Sum_probs=230.3

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~v   84 (331)
                      .++|+|||||||||||++|+++|+++|+ +|++++|+... ..   +      +++++.+|++|++++.+++++  +|+|
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l------~~~~~~~Dl~d~~~~~~~~~~~~~d~v   78 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---P------NVEMISLDIMDSQRVKKVISDIKPDYI   78 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---T------TEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---c------eeeEEECCCCCHHHHHHHHHhcCCCEE
Confidence            4578999999999999999999999999 99999997654 21   1      688999999999999999876  8999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (331)
                      ||+|+.........++...+++|+.++.+++++|++. ++++|||+||.+ +|+.......+++|+++..|.      +.
T Consensus        79 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~-v~g~~~~~~~~~~E~~~~~~~------~~  151 (321)
T 2pk3_A           79 FHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSE-EYGMILPEESPVSEENQLRPM------SP  151 (321)
T ss_dssp             EECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGG-GTBSCCGGGCSBCTTSCCBCC------SH
T ss_pred             EEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHH-hcCCCCCCCCCCCCCCCCCCC------Cc
Confidence            9999976533334457889999999999999999876 689999999984 454331012578898876554      48


Q ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHc---C--CCCc-c--CcCCCCceeHHHHH
Q 020110          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ---G--SKDT-Q--EYHWLGAVPVKDVA  235 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~---~--~~~~-~--~~~~~~~v~v~D~a  235 (331)
                      |+.+|..+|.+++.++++++++++++||+++|||+.... .....++..+..   |  .++. .  ++..++++|++|+|
T Consensus       152 Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva  230 (321)
T 2pk3_A          152 YGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIV  230 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHH
Confidence            999999999999999888899999999999999986542 234455555555   6  3332 3  44678999999999


Q ss_pred             HHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCC---CCCCccccccchHHH-HhhCCCcc-CHHH
Q 020110          236 KAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGE---TQPGLIPCKDAAKRL-MDLGLVFT-PVED  309 (331)
Q Consensus       236 ~a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~k~-~~lG~~~~-~~~~  309 (331)
                      ++++.++..+..+++|+++ +..+|+.|+++.+.+.++. +.+....+   .........+|++|+ +.|||+|+ ++++
T Consensus       231 ~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e  309 (321)
T 2pk3_A          231 QAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANV-KIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEK  309 (321)
T ss_dssp             HHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSS-CCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHH
T ss_pred             HHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCC-CCceeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHH
Confidence            9999999876445588775 4679999999999999953 22211111   112234578899999 77999995 9999


Q ss_pred             HHHHHHHHHHHc
Q 020110          310 AVRETVESLKAK  321 (331)
Q Consensus       310 ~l~~~~~~~~~~  321 (331)
                      +|+++++|++++
T Consensus       310 ~l~~~~~~~~~~  321 (321)
T 2pk3_A          310 SLFEILQSYRQA  321 (321)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHHhcC
Confidence            999999999853

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=8.4e-45  Score=324.81  Aligned_cols=299  Identities=19%  Similarity=0.192  Sum_probs=228.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .+||+|||||||||||++|+++|+++| + +|++++|+.......  +. ... +++++.+|++|++++.++++++|+||
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~--l~-~~~-~v~~~~~Dl~d~~~l~~~~~~~d~Vi  104 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVN-QVHVVDNLLSAEKIN--VP-DHP-AVRFSETSITDDALLASLQDEYDYVF  104 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCS-EEEEECCCTTCCGGG--SC-CCT-TEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCc-eEEEEECCCCCchhh--cc-CCC-ceEEEECCCCCHHHHHHHhhCCCEEE
Confidence            457899999999999999999999999 9 999999876543211  11 011 79999999999999999999999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceeccCCCCCCcccc--CCC---CC-Chhhhh
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFD--ETS---WT-DLEYCK  158 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~--E~~---~~-~~~~~~  158 (331)
                      |+|+......+..++...+++|+.++.+++++|++. ++++|||+||. .+|+...  ..+++  |++   +. .|.   
T Consensus       105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~-~vyg~~~--~~~~~~~E~~~~~~~~~~~---  178 (377)
T 2q1s_A          105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAG-CSIAEKT--FDDAKATEETDIVSLHNND---  178 (377)
T ss_dssp             ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC-----------------CCCCCCCSSCCC---
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCH-HHcCCCC--CCCcCcccccccccccCCC---
Confidence            999975432122346788999999999999999998 89999999997 5555433  24677  876   33 333   


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC---------CCC---CChhHHHHHHHHcCCCCc-c--Cc
Q 020110          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM---------QPY---LNASCAVLQQLLQGSKDT-Q--EY  223 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~---------~~~---~~~~~~~~~~~~~~~~~~-~--~~  223 (331)
                         +.|+.+|..+|.+++.++++.+++++++||+++|||..         .+.   ...+..++..+..+.++. .  ++
T Consensus       179 ---~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~  255 (377)
T 2q1s_A          179 ---SPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGV  255 (377)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGC
T ss_pred             ---CchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCC
Confidence               48999999999999999888899999999999999986         210   234566777788887655 3  44


Q ss_pred             CCCCceeHHHHHHH-HHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCC-CCCCcc-ccccchHHH-H
Q 020110          224 HWLGAVPVKDVAKA-QVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGE-TQPGLI-PCKDAAKRL-M  298 (331)
Q Consensus       224 ~~~~~v~v~D~a~a-~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~k~-~  298 (331)
                      +.++|+|++|+|++ ++.++..+. .|+|+++ ++.+|+.|+++.+.+.++. +.+....+ ...... ...+|++|+ +
T Consensus       256 ~~~~~i~v~Dva~a~i~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~p~~~~~~~~~~~~d~~k~~~  333 (377)
T 2q1s_A          256 ATRDFIFVEDVANGLIACAADGTP-GGVYNIASGKETSIADLATKINEITGN-NTELDRLPKRPWDNSGKRFGSPEKARR  333 (377)
T ss_dssp             CEECCEEHHHHHHHHHHHHHHCCT-TEEEECCCCCCEEHHHHHHHHHHHHTC-CSCCCCCCCCGGGCC-CCCCCCHHHHH
T ss_pred             eEEeeEEHHHHHHHHHHHHHhcCC-CCeEEecCCCceeHHHHHHHHHHHhCC-CCCceeCCCCccccccccccCHHHHHH
Confidence            78999999999999 999998765 4588765 4679999999999999843 22211111 111233 577899999 7


Q ss_pred             hhCCCc-cCHHHHHHHHHHHHHHc
Q 020110          299 DLGLVF-TPVEDAVRETVESLKAK  321 (331)
Q Consensus       299 ~lG~~~-~~~~~~l~~~~~~~~~~  321 (331)
                      .|||+| ++++++|+++++|++++
T Consensus       334 ~lG~~p~~~l~e~l~~~~~~~~~~  357 (377)
T 2q1s_A          334 ELGFSADVSIDDGLRKTIEWTKAN  357 (377)
T ss_dssp             HHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred             HcCCCCCCCHHHHHHHHHHHHHHh
Confidence            899999 59999999999999865

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=5.4e-45  Score=323.84  Aligned_cols=304  Identities=18%  Similarity=0.140  Sum_probs=233.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi   85 (331)
                      ++|+|||||||||||++|+++|+++|+ +|++++|+......+........ +++++.+|++|++++.+++++  +|+||
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   85 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVAD-GMQSEIGDIRDQNKLLESIREFQPEIVF   85 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTT-TSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCC-ceEEEEccccCHHHHHHHHHhcCCCEEE
Confidence            357999999999999999999999999 99999997755433322111112 788999999999999999876  89999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcch
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (331)
                      |+|+.........++...+++|+.++.+++++|++.+ +++|||+||.+ +|+.... ..+++|+++..|.      +.|
T Consensus        86 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~-vyg~~~~-~~~~~E~~~~~~~------~~Y  157 (357)
T 1rkx_A           86 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDK-CYDNKEW-IWGYRENEAMGGY------DPY  157 (357)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGG-GBCCCCS-SSCBCTTSCBCCS------SHH
T ss_pred             ECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHH-HhCCCCc-CCCCCCCCCCCCC------Ccc
Confidence            9999643222234467889999999999999998876 88999999985 4543321 2467787765544      489


Q ss_pred             hHHHHHHHHHHHHHHHHc---------CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCcc--CcCCCCceeHHH
Q 020110          165 PVSKTLAEKAAWEFAEKH---------GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKD  233 (331)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~---------~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~v~D  233 (331)
                      +.+|..+|.+++.+++++         +++++++||+++|||+.......+..++..+..|.++..  +++.++|+|++|
T Consensus       158 ~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~D  237 (357)
T 1rkx_A          158 SNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLE  237 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHH
Confidence            999999999999987654         999999999999999864333456677777778876553  457889999999


Q ss_pred             HHHHHHHhhcC----C-CCCceEEEec---cccCHHHHHHHHHHhCCCCCCCCCCC--CCCCCccccccchHHH-HhhCC
Q 020110          234 VAKAQVLLFES----P-AASGRYLCTN---GIYQFGDFAERVSKLFPEFPVHRFDG--ETQPGLIPCKDAAKRL-MDLGL  302 (331)
Q Consensus       234 ~a~a~~~~l~~----~-~~~g~~~~~~---~~~s~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~k~-~~lG~  302 (331)
                      +|++++.++..    + ...++|++++   +++|+.|+++.+.+.++. +.+....  ..........+|++|+ +.|||
T Consensus       238 va~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~  316 (357)
T 1rkx_A          238 PLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGE-GASWQLDGNAHPHEAHYLKLDCSKAKMQLGW  316 (357)
T ss_dssp             HHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCT-TCCEEC-------CCCCCCBCCHHHHHHHCC
T ss_pred             HHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCC-CCccccCCCCCCcCcccccCCHHHHHHHhCC
Confidence            99999988874    2 3345888763   469999999999999843 2221111  1112344567999999 77999


Q ss_pred             Cc-cCHHHHHHHHHHHHHHcC
Q 020110          303 VF-TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       303 ~~-~~~~~~l~~~~~~~~~~~  322 (331)
                      +| .+++++|+++++|++++.
T Consensus       317 ~p~~~l~e~l~~~~~~~~~~~  337 (357)
T 1rkx_A          317 HPRWNLNTTLEYIVGWHKNWL  337 (357)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHH
T ss_pred             CcCCcHHHHHHHHHHHHHHHh
Confidence            99 599999999999998754

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.8e-44  Score=317.13  Aligned_cols=297  Identities=15%  Similarity=0.156  Sum_probs=227.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      ||+|||||||||||++|+++|+++|+ +|++++|+.....  ..+.   . +++++.+|++|++++.++++  ++|+|||
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~d~vih   73 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGL-SVVVVDNLQTGHE--DAIT---E-GAKFYNGDLRDKAFLRDVFTQENIEAVMH   73 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCG--GGSC---T-TSEEEECCTTCHHHHHHHHHHSCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCcCch--hhcC---C-CcEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            57999999999999999999999999 9999998654332  1121   1 68899999999999999998  8999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +|+.........++...+++|+.++.+++++|++.++++|||+||. .+|+...  ..+++|+++..|.      +.|+.
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~-~~~~~~~--~~~~~E~~~~~~~------~~Y~~  144 (330)
T 2c20_A           74 FAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTA-ATYGEVD--VDLITEETMTNPT------NTYGE  144 (330)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCG-GGGCSCS--SSSBCTTSCCCCS------SHHHH
T ss_pred             CCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCc-eeeCCCC--CCCCCcCCCCCCC------ChHHH
Confidence            9997543212234677899999999999999999999999999997 5555443  3678998876554      48999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCC--------CCChhHHHHHHHHcC-CCCc---------cCcCCCCc
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP--------YLNASCAVLQQLLQG-SKDT---------QEYHWLGA  228 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~--------~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~  228 (331)
                      +|..+|.+++.++++.+++++++||+++|||....        .......++.....+ ..+.         .+++.++|
T Consensus       145 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  224 (330)
T 2c20_A          145 TKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDY  224 (330)
T ss_dssp             HHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECE
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEee
Confidence            99999999999988889999999999999996321        112233333333222 2222         23467899


Q ss_pred             eeHHHHHHHHHHhhcCCC---CCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCC-CCCCccccccchHHH-HhhCC
Q 020110          229 VPVKDVAKAQVLLFESPA---ASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGE-TQPGLIPCKDAAKRL-MDLGL  302 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~---~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~-~~lG~  302 (331)
                      +|++|+|++++.+++.+.   ..++|+++ ++++|+.|+++.+.+.++ .+++..... .........+|++|+ +.|||
T Consensus       225 v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~  303 (330)
T 2c20_A          225 IHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTN-HEIPAEVAPRRAGDPARLVASSQKAKEKLGW  303 (330)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTT-SCCCEEEECCCSSCCSEECBCCHHHHHHHCC
T ss_pred             EeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhC-CCCceeeCCCCCCcccccccCHHHHHHHhCC
Confidence            999999999999987642   24578765 567999999999999984 333322111 112234567899999 78999


Q ss_pred             Cc-c-CHHHHHHHHHHHHHHcC
Q 020110          303 VF-T-PVEDAVRETVESLKAKG  322 (331)
Q Consensus       303 ~~-~-~~~~~l~~~~~~~~~~~  322 (331)
                      +| . +++++|+++++|++++.
T Consensus       304 ~p~~~~l~~~l~~~~~~~~~~~  325 (330)
T 2c20_A          304 DPRYVNVKTIIEHAWNWHQKQP  325 (330)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHCS
T ss_pred             CCccCCHHHHHHHHHHHHHHhh
Confidence            99 4 99999999999998875

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=4e-44  Score=320.58  Aligned_cols=300  Identities=14%  Similarity=0.115  Sum_probs=231.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +||+|||||||||||++|+++|+++|+ +|++++|+..........      +++++.+|++|++++.++++++|+|||+
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------~v~~~~~Dl~d~~~~~~~~~~~d~Vih~  100 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMTEDMF------CDEFHLVDLRVMENCLKVTEGVDHVFNL  100 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSCGGGT------CSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECCCccchhhccC------CceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence            578999999999999999999999999 999999976543322211      6889999999999999999999999999


Q ss_pred             ccCCCCCCC-CCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC---CCccccCCCCCChhhhhccCcc
Q 020110           88 ASPCTLEDP-VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW---KGKVFDETSWTDLEYCKSRKKW  163 (331)
Q Consensus        88 a~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~---~~~~~~E~~~~~~~~~~~~~~~  163 (331)
                      |+....... ..++...+++|+.++.+++++|++.++++|||+||.++ |+....   ...+++|+++..    ..+.+.
T Consensus       101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v-~~~~~~~~~~~~~~~E~~~~~----~~~~~~  175 (379)
T 2c5a_A          101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACI-YPEFKQLETTNVSLKESDAWP----AEPQDA  175 (379)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGG-SCGGGSSSSSSCEECGGGGSS----BCCSSH
T ss_pred             ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehhe-eCCCCCCCccCCCcCcccCCC----CCCCCh
Confidence            997543111 45578899999999999999999999999999999744 443211   113466765211    122358


Q ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC---ChhHHHHHHHHcCCC-Cc-c--CcCCCCceeHHHHHH
Q 020110          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSK-DT-Q--EYHWLGAVPVKDVAK  236 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~-~~-~--~~~~~~~v~v~D~a~  236 (331)
                      |+.+|..+|.+++.++++.+++++++||+++|||......   .....++.++..+.+ +. +  +++.++|+|++|+|+
T Consensus       176 Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~  255 (379)
T 2c5a_A          176 FGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE  255 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHH
Confidence            9999999999999998888999999999999999764321   245566777777765 33 3  447899999999999


Q ss_pred             HHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHH-HhhCCCcc-CHHHHHHH
Q 020110          237 AQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRL-MDLGLVFT-PVEDAVRE  313 (331)
Q Consensus       237 a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~~~~-~~~~~l~~  313 (331)
                      +++.++..+ ..++|+++ ++.+|+.|+++.+.+.++ .+.+....+.........+|++|+ +.|||+|+ +++++|++
T Consensus       256 ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g-~~~~~~~~p~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~  333 (379)
T 2c5a_A          256 GVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEE-KKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRI  333 (379)
T ss_dssp             HHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTT-CCCCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHHHH
T ss_pred             HHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhC-CCCceeeCCCCCCcccccCCHHHHHHHhCCCCCCCHHHHHHH
Confidence            999999876 45678664 577999999999999984 332221111111233467899999 77999995 99999999


Q ss_pred             HHHHHHHc
Q 020110          314 TVESLKAK  321 (331)
Q Consensus       314 ~~~~~~~~  321 (331)
                      +++|++++
T Consensus       334 ~~~~~~~~  341 (379)
T 2c5a_A          334 TYFWIKEQ  341 (379)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99999865

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=9.4e-45  Score=316.30  Aligned_cols=294  Identities=23%  Similarity=0.240  Sum_probs=227.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~   87 (331)
                      |+||||||+||||++++++|+++|+ +|++++|.......  .+.   . +++++.+|++|++++.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~--~~~---~-~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   73 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGL-EVAVLDNLATGKRE--NVP---K-GVPFFRVDLRDKEGVERAFREFRPTHVSHQ   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-EEEEECCCSSCCGG--GSC---T-TCCEECCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCCcCchh--hcc---c-CeEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            4899999999999999999999999 99999885432211  111   1 67789999999999999887  79999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccC-CCCCCccccCCCCCChhhhhccCcchhH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPN-PGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      |+.........++...+++|+.++.+++++|++.++++|||+||.+.+|+. ..  ..+++|+++..|.      +.|+.
T Consensus        74 a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~--~~~~~E~~~~~~~------~~Y~~  145 (311)
T 2p5y_A           74 AAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPE--GERAEETWPPRPK------SPYAA  145 (311)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCT--TCCBCTTSCCCCC------SHHHH
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCC--CCCcCCCCCCCCC------ChHHH
Confidence            987543222234677899999999999999999999999999997455654 22  2567888765554      48999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCCc-c-----C--cCCCCceeHHHHHH
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT-Q-----E--YHWLGAVPVKDVAK  236 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~-~-----~--~~~~~~v~v~D~a~  236 (331)
                      +|..+|.+++.++++.+++++++||+++|||......  ..+..++.++..+.++. +     +  ++.++|+|++|+|+
T Consensus       146 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  225 (311)
T 2p5y_A          146 SKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE  225 (311)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHH
Confidence            9999999999998888999999999999999864321  23455666666776543 3     3  36789999999999


Q ss_pred             HHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCC-CCCCCCCccccccchHHHHhhCCCc-cCHHHHHHH
Q 020110          237 AQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRF-DGETQPGLIPCKDAAKRLMDLGLVF-TPVEDAVRE  313 (331)
Q Consensus       237 a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k~~~lG~~~-~~~~~~l~~  313 (331)
                      +++.++..+  +++|+++ +..+|+.|+++.+.+.++ .+.+.. ............+|++|++.|||+| ++++++|++
T Consensus       226 a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~  302 (311)
T 2p5y_A          226 AHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAG-KAPEVQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQEGIRL  302 (311)
T ss_dssp             HHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHT-CCCCEEEECCCTTCCSBCCBCCHHHHTTTCCCSSCHHHHHHH
T ss_pred             HHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhC-CCCCceeCCCCccchhhccCCHHHHHHCCCCCCCCHHHHHHH
Confidence            999998764  5578765 567999999999999984 332211 1111122345778999993399999 699999999


Q ss_pred             HHHHHHHc
Q 020110          314 TVESLKAK  321 (331)
Q Consensus       314 ~~~~~~~~  321 (331)
                      +++|+++.
T Consensus       303 ~~~~~~~~  310 (311)
T 2p5y_A          303 TVDHFRGA  310 (311)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHHhh
Confidence            99999763

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.2e-43  Score=312.54  Aligned_cols=298  Identities=16%  Similarity=0.170  Sum_probs=229.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCC--ccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      |+|||||||||||++|+++|+++|  + +|++++|+..  ....+..+.. .. +++++.+|++|++++.+++.++|+||
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~-~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~d~~~~~~~~~~~d~vi   80 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDW-EVINIDKLGYGSNPANLKDLED-DP-RYTFVKGDVADYELVKELVRKVDGVV   80 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCGGGGTTTTT-CT-TEEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCC-EEEEEecCcccCchhHHhhhcc-CC-ceEEEEcCCCCHHHHHHHhhCCCEEE
Confidence            589999999999999999999996  8 9999998652  2222222211 12 79999999999999999999999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCC-CEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcch
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (331)
                      |+|+.........++...+++|+.++.+++++|.+.+. ++|||+||. .+|+...  ..+++|+++..|.      +.|
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~-~vyg~~~--~~~~~E~~~~~~~------~~Y  151 (336)
T 2hun_A           81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTD-EVYGDIL--KGSFTENDRLMPS------SPY  151 (336)
T ss_dssp             ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEG-GGGCCCS--SSCBCTTBCCCCC------SHH
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccH-HHHCCCC--CCCcCCCCCCCCC------Ccc
Confidence            99997542212234677899999999999999998764 699999997 4555433  2578888766554      489


Q ss_pred             hHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHHHHHh
Q 020110          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQVLL  241 (331)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a~~~~  241 (331)
                      +.+|..+|.+++.++++.+++++++||+++|||...+. .....++..+..+.++. +  +++.++|+|++|+|++++.+
T Consensus       152 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  230 (336)
T 2hun_A          152 SATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELV  230 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHH
Confidence            99999999999999988899999999999999986432 34556677777776654 2  34779999999999999999


Q ss_pred             hcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCCCC--CCCCCCCCCccccccchHHH-HhhCCCc-cCHHHHHHHHHH
Q 020110          242 FESPAASGRYLCTN-GIYQFGDFAERVSKLFPEFPVH--RFDGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVE  316 (331)
Q Consensus       242 l~~~~~~g~~~~~~-~~~s~~e~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~  316 (331)
                      +.....+++|++++ ..+|+.|+++.+.+.++. +.+  ..............+|++|+ +.|||+| ++++++|+++++
T Consensus       231 ~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~  309 (336)
T 2hun_A          231 LLKGESREIYNISAGEEKTNLEVVKIILRLMGK-GEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTID  309 (336)
T ss_dssp             HHHCCTTCEEEECCSCEECHHHHHHHHHHHTTC-CSTTEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHH
T ss_pred             HhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCC-CcccccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence            87665445787755 569999999999999953 222  11111112223456899999 7799999 699999999999


Q ss_pred             HHHHc
Q 020110          317 SLKAK  321 (331)
Q Consensus       317 ~~~~~  321 (331)
                      |++++
T Consensus       310 ~~~~~  314 (336)
T 2hun_A          310 WYLKN  314 (336)
T ss_dssp             HHHHT
T ss_pred             HHHhC
Confidence            99875

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=7.5e-44  Score=314.04  Aligned_cols=298  Identities=19%  Similarity=0.232  Sum_probs=232.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC---C---CCEEEEEecCCC--ccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN---N---YTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~---g---~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      |+|||||||||||++|+++|+++   |   + +|++++|+..  ....+..+.. .. +++++.+|++|++++.+++.++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~-~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~d~~~~~~~~~~~   77 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPAD-EVIVLDSLTYAGNRANLAPVDA-DP-RLRFVHGDIRDAGLLARELRGV   77 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCS-EEEEEECCCTTCCGGGGGGGTT-CT-TEEEEECCTTCHHHHHHHTTTC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCce-EEEEEECCCccCchhhhhhccc-CC-CeEEEEcCCCCHHHHHHHhcCC
Confidence            48999999999999999999997   7   8 9999998653  1222222211 12 7899999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccC
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (331)
                      |+|||+|+.........++...+++|+.++.+++++|++.++++|||+||. .+|+...  ..+++|+++..|.      
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~-~vyg~~~--~~~~~E~~~~~~~------  148 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTN-QVYGSID--SGSWTESSPLEPN------  148 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEG-GGGCCCS--SSCBCTTSCCCCC------
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecch-HHhCCCC--CCCCCCCCCCCCC------
Confidence            999999997543212234577899999999999999999999999999997 4454433  2578888766554      


Q ss_pred             cchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHHHHH
Q 020110          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQ  238 (331)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~  238 (331)
                      +.|+.+|..+|.+++.++++.+++++++||+++|||..... ..+..++..+..+.++.   .+++.++|+|++|+|+++
T Consensus       149 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  227 (337)
T 1r6d_A          149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI  227 (337)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHH
Confidence            48999999999999999888899999999999999986432 34556677777776654   244778999999999999


Q ss_pred             HHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCCCC--CCCCCCCCCccccccchHHH-HhhCCCc-cCHHHHHHH
Q 020110          239 VLLFESPAASGRYLCTN-GIYQFGDFAERVSKLFPEFPVH--RFDGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRE  313 (331)
Q Consensus       239 ~~~l~~~~~~g~~~~~~-~~~s~~e~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~  313 (331)
                      +.++.....+++|++++ ..+|+.|+++.+.+.++. +.+  .+............+|++|+ +.|||+| ++++++|++
T Consensus       228 ~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~  306 (337)
T 1r6d_A          228 ALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGA-DWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLAR  306 (337)
T ss_dssp             HHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTC-CGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred             HHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCC-CcccceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHH
Confidence            99997665445887755 569999999999999843 322  11111111223456899999 7799999 699999999


Q ss_pred             HHHHHHHc
Q 020110          314 TVESLKAK  321 (331)
Q Consensus       314 ~~~~~~~~  321 (331)
                      +++|++++
T Consensus       307 ~~~~~~~~  314 (337)
T 1r6d_A          307 TVRWYREN  314 (337)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhc
Confidence            99999875

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=1.2e-44  Score=316.84  Aligned_cols=290  Identities=16%  Similarity=0.122  Sum_probs=226.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc----cchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCcc
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD----SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      .+||+|||||||||||++|+++|+++|+ +|++++|+...    ...+..... .. +++++.+|+.          ++|
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~----------~~d   71 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLRVPPMIPPEGTGKFLE-KP-VLELEERDLS----------DVR   71 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCSSCCSSCCTTSSEEEC-SC-GGGCCHHHHT----------TEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcccccchhhhhhhcc-CC-CeeEEeCccc----------cCC
Confidence            3467999999999999999999999999 99999997652    222111100 01 4445555554          899


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      +|||+|+.........++...++ |+.++.+++++|++.++++|||+||.+ +|+...  ..+++|+++..|.      +
T Consensus        72 ~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~-v~~~~~--~~~~~E~~~~~p~------~  141 (321)
T 3vps_A           72 LVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCE-VYGQAD--TLPTPEDSPLSPR------S  141 (321)
T ss_dssp             EEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCSCS--SSSBCTTSCCCCC------S
T ss_pred             EEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHH-HhCCCC--CCCCCCCCCCCCC------C
Confidence            99999997654333445666778 999999999999999999999999974 555443  3688998877665      4


Q ss_pred             chhHHHHHHHHHHHHHHHHcCC-eEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHHH
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGV-DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQ  238 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~-~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a~  238 (331)
                      .|+.+|..+|.+++.+++++++ +++++||+++|||+... ......++..+..+.++. .  +++.++|+|++|+|+++
T Consensus       142 ~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~  220 (321)
T 3vps_A          142 PYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP-DALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKL  220 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT-TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC-CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHH
Confidence            8999999999999999988899 99999999999998754 245667777777777655 3  45789999999999999


Q ss_pred             HHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCC-CCCCCCCccccccchHHH-HhhCCCc--cCHHHHHHH
Q 020110          239 VLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRF-DGETQPGLIPCKDAAKRL-MDLGLVF--TPVEDAVRE  313 (331)
Q Consensus       239 ~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k~-~~lG~~~--~~~~~~l~~  313 (331)
                      +.++..+.. |+|+++ ++.+|+.|+++.+. .++ .+.+.. ............+|++|+ +.|||+|  ++++++|++
T Consensus       221 ~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~-~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~  297 (321)
T 3vps_A          221 VALANRPLP-SVVNFGSGQSLSVNDVIRILQ-ATS-PAAEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIRL  297 (321)
T ss_dssp             HHGGGSCCC-SEEEESCSCCEEHHHHHHHHH-TTC-TTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHH
T ss_pred             HHHHhcCCC-CeEEecCCCcccHHHHHHHHH-HhC-CCCccccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHHHHH
Confidence            999998766 488775 56799999999999 884 332221 112223455678999999 6799999  599999999


Q ss_pred             HHHHHHHcCC
Q 020110          314 TVESLKAKGF  323 (331)
Q Consensus       314 ~~~~~~~~~~  323 (331)
                      +++|+++++.
T Consensus       298 ~~~~~~~~~~  307 (321)
T 3vps_A          298 TLEWWQSRDL  307 (321)
T ss_dssp             HHHHHHTSCT
T ss_pred             HHHHHHhCCC
Confidence            9999998764

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.1e-43  Score=314.32  Aligned_cols=300  Identities=16%  Similarity=0.212  Sum_probs=231.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC--CCCEEEEEecCCCc--cchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      ||+|||||||||||++|+++|+++  |+ +|++++|+...  ...+..+..  . +++++.+|++|++++.++++++|+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~d~~~~~~~~~~~d~v   79 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVLDKLTYAGNKANLEAILG--D-RVELVVGDIADAELVDKLAAKADAI   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCGGGTGGGCS--S-SEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCC-EEEEEeCCCCCCChhHHhhhcc--C-CeEEEECCCCCHHHHHHHhhcCCEE
Confidence            679999999999999999999998  88 99999986532  222222211  1 7899999999999999999999999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC----------CCccccCCCCCCh
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW----------KGKVFDETSWTDL  154 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~----------~~~~~~E~~~~~~  154 (331)
                      ||+|+.........++...+++|+.++.+++++|.+.++ +|||+||.+ +|+....          ...+++|+++..|
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~-vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~  157 (348)
T 1oc2_A           80 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDE-VYGDLPLREDLPGHGEGPGEKFTAETNYNP  157 (348)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGG-GGCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred             EECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccc-eeCCCcccccccccccccCCCcCCCCCCCC
Confidence            999997543212234577899999999999999998887 999999974 4443211          1156788776554


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v  231 (331)
                      .      +.|+.+|..+|.+++.++++.+++++++||+.+|||..... ..+..++..+..+.+..   .+++.++|+|+
T Consensus       158 ~------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  230 (348)
T 1oc2_A          158 S------SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHT  230 (348)
T ss_dssp             C------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEH
T ss_pred             C------CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEEH
Confidence            4      48999999999999999888899999999999999986432 34556677777777654   24477899999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCC-CCCCCCCCCCCccccccchHHH-HhhCCCcc-C-
Q 020110          232 KDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFP-VHRFDGETQPGLIPCKDAAKRL-MDLGLVFT-P-  306 (331)
Q Consensus       232 ~D~a~a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~-~~lG~~~~-~-  306 (331)
                      +|+|++++.++.....+++|+++ +.++|+.|+++.+.+.++... ...+............+|++|+ +.|||+|+ + 
T Consensus       231 ~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~  310 (348)
T 1oc2_A          231 NDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTD  310 (348)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCC
T ss_pred             HHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHHcCCCCCCCc
Confidence            99999999999766444478765 467999999999999995321 1111111112223456899999 77999994 7 


Q ss_pred             HHHHHHHHHHHHHHc
Q 020110          307 VEDAVRETVESLKAK  321 (331)
Q Consensus       307 ~~~~l~~~~~~~~~~  321 (331)
                      ++++|+++++|++++
T Consensus       311 ~~~~l~~~~~~~~~~  325 (348)
T 1oc2_A          311 FSEGLEETIQWYTDN  325 (348)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999999875

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=2.3e-43  Score=311.88  Aligned_cols=307  Identities=19%  Similarity=0.257  Sum_probs=231.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc-hHHHHHhcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~vih~   87 (331)
                      |+|||||||||||++++++|+++ |+ +|++++|+......+..    .. +++++.+|++|. +.+.++++++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~d~vih~   74 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLN----HP-HFHFVEGDISIHSEWIEYHVKKCDVVLPL   74 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGGGGGGTT----CT-TEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCCcchHHHhhc----CC-CeEEEeccccCcHHHHHhhccCCCEEEEc
Confidence            48999999999999999999998 89 99999998655433221    11 789999999985 5688888899999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhh-hccCcchhH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC-KSRKKWYPV  166 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~y~~  166 (331)
                      |+.........++...+++|+.++.+++++|++.+ ++|||+||.+ +|+...  ..+++|+++..+..+ ..+.+.|+.
T Consensus        75 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~-v~g~~~--~~~~~e~~~~~~~~~~~~~~~~Y~~  150 (345)
T 2bll_A           75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSE-VYGMCS--DKYFDEDHSNLIVGPVNKPRWIYSV  150 (345)
T ss_dssp             BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGG-GGBTCC--CSSBCTTTCCCBCCCTTCGGGHHHH
T ss_pred             ccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHH-HcCCCC--CCCcCCcccccccCcccCcccccHH
Confidence            99754321223467789999999999999999988 8999999974 555433  256788775421110 112347999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC-------CChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHH
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-------LNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAK  236 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~  236 (331)
                      +|..+|.+++.++++.+++++++||+++|||+....       ...+..++..+..+.++. .  +++.++|+|++|+|+
T Consensus       151 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  230 (345)
T 2bll_A          151 SKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE  230 (345)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHH
Confidence            999999999999888899999999999999986421       123456677777787654 3  457889999999999


Q ss_pred             HHHHhhcCCC--CCc-eEEEec-c-ccCHHHHHHHHHHhCCCCCC----CCCCC----C-------CCCCccccccchHH
Q 020110          237 AQVLLFESPA--ASG-RYLCTN-G-IYQFGDFAERVSKLFPEFPV----HRFDG----E-------TQPGLIPCKDAAKR  296 (331)
Q Consensus       237 a~~~~l~~~~--~~g-~~~~~~-~-~~s~~e~~~~i~~~~~~~~~----~~~~~----~-------~~~~~~~~~~~~~k  296 (331)
                      +++.++..+.  ..| +|++++ + .+|+.|+++.+.+.++....    +....    .       .........+|++|
T Consensus       231 a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  310 (345)
T 2bll_A          231 ALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRN  310 (345)
T ss_dssp             HHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHH
T ss_pred             HHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhcccHHH
Confidence            9999998763  334 787765 3 69999999999998743211    11100    0       00112456789999


Q ss_pred             H-HhhCCCc-cCHHHHHHHHHHHHHHcCCCCc
Q 020110          297 L-MDLGLVF-TPVEDAVRETVESLKAKGFLGQ  326 (331)
Q Consensus       297 ~-~~lG~~~-~~~~~~l~~~~~~~~~~~~~~~  326 (331)
                      + +.|||+| ++++++|+++++|++++.....
T Consensus       311 ~~~~lG~~p~~~l~~~l~~~~~~~~~~~~~~~  342 (345)
T 2bll_A          311 AHRCLDWEPKIDMQETIDETLDFFLRTVDLTD  342 (345)
T ss_dssp             HHHHHCCCCCCCHHHHHHHHHHHHHHHSCTTC
T ss_pred             HHHhcCCCccccHHHHHHHHHHHHHHcCCCCC
Confidence            9 7899999 5999999999999988765543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-43  Score=310.56  Aligned_cols=301  Identities=17%  Similarity=0.114  Sum_probs=231.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKG   83 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   83 (331)
                      .+|+|||||||||||++|+++|+++|+ +|++++|+....  ..+..+.. .. +++++.+|++|++++.+++++  +|+
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~d~~~~~~~~~~~~~d~   89 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI-EG-DIQYEDGDMADACSVQRAVIKAQPQE   89 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC-GG-GEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccc-cC-ceEEEECCCCCHHHHHHHHHHcCCCE
Confidence            357999999999999999999999999 999999976542  11222110 11 789999999999999999875  699


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCC-CEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      |||+|+.........++...+++|+.++.+++++|++.++ ++|||+||. .+|+...  ..+++|+++..|.      +
T Consensus        90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~-~v~g~~~--~~~~~E~~~~~p~------~  160 (335)
T 1rpn_A           90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTS-EMFGLIQ--AERQDENTPFYPR------S  160 (335)
T ss_dssp             EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEG-GGGCSCS--SSSBCTTSCCCCC------S
T ss_pred             EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCH-HHhCCCC--CCCCCcccCCCCC------C
Confidence            9999997553222455788899999999999999999886 899999997 4554433  2578898876654      4


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCCc--c--CcCCCCceeHHHHHH
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVPVKDVAK  236 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~v~v~D~a~  236 (331)
                      .|+.+|..+|.+++.++++++++++++||+++|||+.....  ..+..++.++..|....  .  +++.++|+|++|+|+
T Consensus       161 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~  240 (335)
T 1rpn_A          161 PYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE  240 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHH
Confidence            89999999999999998888999999999999999864322  12344556666675432  3  457899999999999


Q ss_pred             HHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCC---CCCCCC-CCCCCccccccchHHH-HhhCCCc-cCHHH
Q 020110          237 AQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFP---VHRFDG-ETQPGLIPCKDAAKRL-MDLGLVF-TPVED  309 (331)
Q Consensus       237 a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~  309 (331)
                      +++.+++.+. .++|+++ ++++|+.|+++.+.+.++...   ++.... ..........+|++|+ +.|||+| +++++
T Consensus       241 a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e  319 (335)
T 1rpn_A          241 AMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDE  319 (335)
T ss_dssp             HHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHH
T ss_pred             HHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHH
Confidence            9999998764 4778665 567999999999999995321   111100 0112234567899999 7799999 59999


Q ss_pred             HHHHHHHHHHHc
Q 020110          310 AVRETVESLKAK  321 (331)
Q Consensus       310 ~l~~~~~~~~~~  321 (331)
                      +|+++++|++++
T Consensus       320 ~l~~~~~~~~~~  331 (335)
T 1rpn_A          320 LIRMMVEADLRR  331 (335)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999999864

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=2.1e-44  Score=314.15  Aligned_cols=292  Identities=16%  Similarity=0.163  Sum_probs=224.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC--CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   85 (331)
                      |+|||||||||||++|+++|+++  |+ +|++++|+..... ...       +++++.+|++|++++.++++  ++|+||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~-~~~-------~~~~~~~D~~d~~~~~~~~~~~~~d~vi   73 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTE-NVIASDIRKLNTD-VVN-------SGPFEVVNALDFNQIEHLVEVHKITDIY   73 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGG-GEEEEESCCCSCH-HHH-------SSCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCC-EEEEEcCCCcccc-ccC-------CCceEEecCCCHHHHHHHHhhcCCCEEE
Confidence            58999999999999999999999  89 9999999765532 211       56789999999999999998  899999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      |+|+..... ...++...+++|+.++.+++++|++.++++|||+||.++ |+... ...+.+|+++..|.      +.|+
T Consensus        74 h~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~-~~~~~-~~~~~~e~~~~~~~------~~Y~  144 (312)
T 2yy7_A           74 LMAALLSAT-AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAV-FGPTT-PKENTPQYTIMEPS------TVYG  144 (312)
T ss_dssp             ECCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGG-CCTTS-CSSSBCSSCBCCCC------SHHH
T ss_pred             ECCccCCCc-hhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHH-hCCCC-CCCCccccCcCCCC------chhH
Confidence            999875421 123467789999999999999999999999999999854 44322 12467777765544      4899


Q ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC---ChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHHHHHH
Q 020110          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQV  239 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~~  239 (331)
                      .+|..+|.+++.++++++++++++||+++|||...+..   ......+.+...+.+..   .+++.++|+|++|+|++++
T Consensus       145 ~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  224 (312)
T 2yy7_A          145 ISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATI  224 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHH
Confidence            99999999999998888999999999999998754322   12333333333333332   3457899999999999999


Q ss_pred             HhhcCCCC----CceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCC--CCccccccchHHH-HhhCCCcc-CHHHHH
Q 020110          240 LLFESPAA----SGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQ--PGLIPCKDAAKRL-MDLGLVFT-PVEDAV  311 (331)
Q Consensus       240 ~~l~~~~~----~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k~-~~lG~~~~-~~~~~l  311 (331)
                      .+++.+..    +++|+++++.+|+.|+++.+.+.+|..+++..+....  .......+|++|+ +.|||+|+ +++++|
T Consensus       225 ~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l  304 (312)
T 2yy7_A          225 NIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMT  304 (312)
T ss_dssp             HHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTTCEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHHH
T ss_pred             HHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCCCceEeccCccccccccccccCCHHHHHHHcCCCCCCCHHHHH
Confidence            99987653    2578887778999999999999996333322111000  0112346899999 77999994 999999


Q ss_pred             HHHHHHHH
Q 020110          312 RETVESLK  319 (331)
Q Consensus       312 ~~~~~~~~  319 (331)
                      +++++|++
T Consensus       305 ~~~~~~~k  312 (312)
T 2yy7_A          305 KDMIEHLS  312 (312)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            99999984

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-44  Score=315.79  Aligned_cols=303  Identities=15%  Similarity=0.151  Sum_probs=225.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~v   84 (331)
                      ||+|||||||||||++|+++|++.|+ +|++++|+....  .....+.. .+ +++++.+|++|++++.+++++  +|+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~l~~-~~-~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSS-LG-NFEFVHGDIRNKNDVTRLITKYMPDSC   77 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHT-TC-CCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeCCCccCchhhhhhhcc-CC-ceEEEEcCCCCHHHHHHHHhccCCCEE
Confidence            57999999999999999999999999 999998853221  11111111 11 588999999999999999987  9999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCccceeccCCCCC--------------CccccCC
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWK--------------GKVFDET  149 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~--------------~~~~~E~  149 (331)
                      ||+|+.........++...+++|+.++.+++++|++.+++ +|||+||.+ +|+.....              ..+++|+
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~-v~g~~~~~~~~e~~~~~~~~~~~~~~~e~  156 (347)
T 1orr_A           78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNK-VYGDLEQYKYNETETRYTCVDKPNGYDES  156 (347)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGG-GGTTCTTSCEEECSSCEEETTCTTCBCTT
T ss_pred             EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHH-HhCCCCcCCcccccccccccccccCcccc
Confidence            9999975432122346788999999999999999998886 999999974 45433210              0124555


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC--CChhHHHHHHHHcCC-----CCc--
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGS-----KDT--  220 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~--~~~~~~~~~~~~~~~-----~~~--  220 (331)
                      ++..|.      +.|+.+|..+|.+++.++++.+++++++||+.+|||.....  ...+..++.++..+.     ++.  
T Consensus       157 ~~~~~~------~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (347)
T 1orr_A          157 TQLDFH------SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTIS  230 (347)
T ss_dssp             SCCCCC------HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             CCCCCC------CchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEe
Confidence            544433      48999999999999999888899999999999999976431  123445556655554     333  


Q ss_pred             -cCcCCCCceeHHHHHHHHHHhhcC-CCCCc-eEEEecc---ccCHHHHHHHHHHhCCCCCCCCCC-CCCCCCccccccc
Q 020110          221 -QEYHWLGAVPVKDVAKAQVLLFES-PAASG-RYLCTNG---IYQFGDFAERVSKLFPEFPVHRFD-GETQPGLIPCKDA  293 (331)
Q Consensus       221 -~~~~~~~~v~v~D~a~a~~~~l~~-~~~~g-~~~~~~~---~~s~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~  293 (331)
                       .+++.++|+|++|+|++++.++.. ....| +|++++.   ++|+.|+++.+.+.++. +.+... ...........+|
T Consensus       231 g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d  309 (347)
T 1orr_A          231 GNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI-DMRFTNLPVRESDQRVFVAD  309 (347)
T ss_dssp             SSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTC-CCCEEEECCCSSCCSEECBC
T ss_pred             cCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCC-CCCceeCCCCCCCcceeecC
Confidence             345789999999999999999975 22345 7887654   38999999999999853 222111 1111223456789


Q ss_pred             hHHH-HhhCCCc-cCHHHHHHHHHHHHHHcC
Q 020110          294 AKRL-MDLGLVF-TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       294 ~~k~-~~lG~~~-~~~~~~l~~~~~~~~~~~  322 (331)
                      ++|+ +.|||+| ++++++|+++++|++++.
T Consensus       310 ~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  340 (347)
T 1orr_A          310 IKKITNAIDWSPKVSAKDGVQKMYDWTSSIL  340 (347)
T ss_dssp             CHHHHHHHCCCCCSCHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHCCCccCCHHHHHHHHHHHHHHHH
Confidence            9999 7899999 699999999999998763

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=7.4e-44  Score=311.34  Aligned_cols=288  Identities=20%  Similarity=0.186  Sum_probs=222.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi   85 (331)
                      +||+|||||||||||++|+++|+++|+       +......           .++++.+|++|++++.+++++  +|+||
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~~~d~Vi   66 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAG-------LPGEDWV-----------FVSSKDADLTDTAQTRALFEKVQPTHVI   66 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTC-------CTTCEEE-----------ECCTTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCC-------ccccccc-----------ccCceecccCCHHHHHHHHhhcCCCEEE
Confidence            468999999999999999999999997       1111000           344457999999999999986  99999


Q ss_pred             EcccCCCC-CCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCC----CCChhhhhcc
Q 020110           86 HVASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETS----WTDLEYCKSR  160 (331)
Q Consensus        86 h~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~----~~~~~~~~~~  160 (331)
                      |+|+.... .....++...+++|+.++.+++++|++.++++|||+||. .+|+...  ..+++|++    +..|..    
T Consensus        67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~-~vyg~~~--~~~~~E~~~~~~~~~p~~----  139 (319)
T 4b8w_A           67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLST-CIFPDKT--TYPIDETMIHNGPPHNSN----  139 (319)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCG-GGSCSSC--CSSBCGGGGGBSCCCSSS----
T ss_pred             ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcch-hhcCCCC--CCCccccccccCCCCCCc----
Confidence            99997542 123455778899999999999999999999999999998 5555443  36788876    322221    


Q ss_pred             CcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHHH----HHcCCCCc---cCcCCCCcee
Q 020110          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQ----LLQGSKDT---QEYHWLGAVP  230 (331)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~----~~~~~~~~---~~~~~~~~v~  230 (331)
                       ..|+.+|..+|++++.++++.+++++++||+++|||+....   ...+..++.+    +..+.++.   .+++.++|+|
T Consensus       140 -~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  218 (319)
T 4b8w_A          140 -FGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIY  218 (319)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEE
T ss_pred             -chHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEe
Confidence             25999999999999999988999999999999999986532   2344555655    67777665   3457899999


Q ss_pred             HHHHHHHHHHhhcCCCC-Cc-eEEE-eccccCHHHHHHHHHHhCCCCCCCCC-CCCCCCCccccccchHHH-HhhCCCc-
Q 020110          231 VKDVAKAQVLLFESPAA-SG-RYLC-TNGIYQFGDFAERVSKLFPEFPVHRF-DGETQPGLIPCKDAAKRL-MDLGLVF-  304 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~~-~g-~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k~-~~lG~~~-  304 (331)
                      ++|+|++++.++..+.. .+ +|++ +++.+|+.|+++.+.+.+| .+.+.. .............|++|+ +.|||.| 
T Consensus       219 v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~  297 (319)
T 4b8w_A          219 SLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMD-FHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRF  297 (319)
T ss_dssp             HHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTT-CCSCEEEETTSCCCCSCCCBCCHHHHHHCTTCCC
T ss_pred             HHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhC-CCCcEEeCCCCCcCcccccCCHHHHHHhcCCCCC
Confidence            99999999999987433 33 7865 5678999999999999995 332221 111122334567999999 6799999 


Q ss_pred             cCHHHHHHHHHHHHHHcC
Q 020110          305 TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       305 ~~~~~~l~~~~~~~~~~~  322 (331)
                      ++++++|+++++|++++.
T Consensus       298 ~~~~~~l~~~~~~~~~~~  315 (319)
T 4b8w_A          298 TPFKQAVKETCAWFTDNY  315 (319)
T ss_dssp             CCHHHHHHHHHHHHHHSC
T ss_pred             CCHHHHHHHHHHHHHHHH
Confidence            699999999999999864

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=2e-42  Score=305.70  Aligned_cols=300  Identities=21%  Similarity=0.267  Sum_probs=225.0

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc-hhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .+||+|||||||||||++|+++|+++|+ +|++++|+..... .+..+.. .. +++++.+|+.+..     +.++|+||
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~-----~~~~d~vi   96 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIG-HE-NFELINHDVVEPL-----YIEVDQIY   96 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGTGGGTT-CT-TEEEEECCTTSCC-----CCCCSEEE
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCCCccchhhhhhhcc-CC-ceEEEeCccCChh-----hcCCCEEE
Confidence            3568999999999999999999999999 9999998654321 2222111 11 7899999998753     56899999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      |+|+......+..++...+++|+.++.+++++|++.++ +|||+||. .+|+...  ..+++|+++.... ...+.+.|+
T Consensus        97 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~-~v~g~~~--~~~~~E~~~~~~~-~~~~~~~Y~  171 (343)
T 2b69_A           97 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTS-EVYGDPE--VHPQSEDYWGHVN-PIGPRACYD  171 (343)
T ss_dssp             ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEG-GGGBSCS--SSSBCTTCCCBCC-SSSTTHHHH
T ss_pred             ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcH-HHhCCCC--CCCCcccccccCC-CCCCCCchH
Confidence            99997653223345678899999999999999998886 99999997 4555443  2567777432110 011234799


Q ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC-CChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHHHHHh
Q 020110          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQVLL  241 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a~~~~  241 (331)
                      .+|..+|.+++.++++.+++++++||+++|||..... ...+..++.++..+.++. .  +++.++|+|++|+|++++.+
T Consensus       172 ~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~  251 (343)
T 2b69_A          172 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVAL  251 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHH
Confidence            9999999999999888899999999999999986432 234556677777777654 3  44789999999999999999


Q ss_pred             hcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCC-CCCCCCCccccccchHHH-HhhCCCc-cCHHHHHHHHHHH
Q 020110          242 FESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRF-DGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVES  317 (331)
Q Consensus       242 l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~  317 (331)
                      +..+ ..++|+++ ++++|+.|+++.+.+.+|.. .+.. .............|++|+ +.|||+| ++++++|+++++|
T Consensus       252 ~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~  329 (343)
T 2b69_A          252 MNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSG-SEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHY  329 (343)
T ss_dssp             HTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCC-CCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred             HhcC-CCCeEEecCCCCCcHHHHHHHHHHHhCCC-CCceeCCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence            8765 35678665 56799999999999998532 2211 111112234567899999 7899999 6999999999999


Q ss_pred             HHHc
Q 020110          318 LKAK  321 (331)
Q Consensus       318 ~~~~  321 (331)
                      ++++
T Consensus       330 ~~~~  333 (343)
T 2b69_A          330 FRKE  333 (343)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9865

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=2.6e-43  Score=311.93  Aligned_cols=303  Identities=20%  Similarity=0.176  Sum_probs=226.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-------cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--C
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-------SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--G   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   80 (331)
                      |+|||||||||||++|+++|+++|+ +|++++|+...       ......+....+.+++++.+|++|++++.++++  +
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            6899999999999999999999999 99999886543       111111100001168899999999999999988  7


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhcc
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (331)
                      +|+|||+|+.........++...+++|+.++.++++++++.++++|||+||. .+|+...  ..+++|+++..|.     
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~-~~~g~~~--~~~~~E~~~~~p~-----  153 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSA-TVYGNPQ--YLPLDEAHPTGGC-----  153 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG-GGGCSCS--SSSBCTTSCCCCC-----
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcH-HHhCCCC--CCCcCCCCCCCCC-----
Confidence            9999999997543212234678899999999999999999999999999997 4555433  3678898876551     


Q ss_pred             CcchhHHHHHHHHHHHHHHHH-cCCeEEEEcCCcccCCCCC------C---CCChhHHHHHHHH-cCCCCc---------
Q 020110          161 KKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQ------P---YLNASCAVLQQLL-QGSKDT---------  220 (331)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~-~~~~~~~lR~~~v~G~~~~------~---~~~~~~~~~~~~~-~~~~~~---------  220 (331)
                      .+.|+.+|..+|.+++.++++ .+++++++||+++|||...      .   .......++.... .+.++.         
T Consensus       154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  233 (348)
T 1ek6_A          154 TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE  233 (348)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred             CCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCC
Confidence            248999999999999998866 2399999999999999531      1   1123333444444 344332         


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCC--CCC-ceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCC-CCCCccccccchH
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESP--AAS-GRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGE-TQPGLIPCKDAAK  295 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~--~~~-g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  295 (331)
                      .+++.++|+|++|+|++++.+++.+  ..+ ++|+++ +.++|+.|+++.+.+.++ .+++..... .........+|++
T Consensus       234 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~  312 (348)
T 1ek6_A          234 DGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG-KKIPYKVVARREGDVAACYANPS  312 (348)
T ss_dssp             SSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHC-SCCCEEEECCCTTCCSEECBCCH
T ss_pred             CCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhC-CCCceeeCCCCCccchhhccCHH
Confidence            2346789999999999999998764  233 478765 567999999999999984 333322111 1122345678999


Q ss_pred             HH-HhhCCCc-cCHHHHHHHHHHHHHHcC
Q 020110          296 RL-MDLGLVF-TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       296 k~-~~lG~~~-~~~~~~l~~~~~~~~~~~  322 (331)
                      |+ +.|||+| .+++++|+++++|++++.
T Consensus       313 k~~~~lG~~p~~~l~~~l~~~~~w~~~~~  341 (348)
T 1ek6_A          313 LAQEELGWTAALGLDRMCEDLWRWQKQNP  341 (348)
T ss_dssp             HHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             HHHHhcCCCCCCCHHHHHHHHHHHHHhcc
Confidence            99 7899999 599999999999998864

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=7.9e-43  Score=315.01  Aligned_cols=309  Identities=17%  Similarity=0.155  Sum_probs=226.1

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc-----------------hhhcCCCCCCCcEEEEEccCC
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-----------------HLFALPGAGDANLRVFEADVL   69 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----------------~~~~~~~~~~~~~~~~~~Dl~   69 (331)
                      .+|++|||||||||||++|+++|+++|+ +|++++|......                 .+.........+++++.+|++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCC-eEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            4678999999999999999999999999 9999987532210                 010000000116889999999


Q ss_pred             CchHHHHHhcC--ccEEEEcccCCCCCCCCCch---hhhhHHHHHHHHHHHHHHHhCCC-CEEEEeCccceeccCCCCCC
Q 020110           70 DSGAVSRAVEG--CKGVFHVASPCTLEDPVDPE---KELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKG  143 (331)
Q Consensus        70 ~~~~~~~~~~~--~d~vih~a~~~~~~~~~~~~---~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~  143 (331)
                      |++++.+++++  +|+|||+||.........++   ...+++|+.++.+++++|++.++ ++|||+||. .+|+...   
T Consensus        88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~-~vyg~~~---  163 (404)
T 1i24_A           88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTM-GEYGTPN---  163 (404)
T ss_dssp             SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCG-GGGCCCS---
T ss_pred             CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcH-HHhCCCC---
Confidence            99999999987  99999999975432112223   24789999999999999998887 599999997 5555432   


Q ss_pred             ccccCCCCCCh--------hhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC-------------
Q 020110          144 KVFDETSWTDL--------EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-------------  202 (331)
Q Consensus       144 ~~~~E~~~~~~--------~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-------------  202 (331)
                      .+++|+.+...        .....+.+.|+.+|..+|.+++.++++++++++++||++||||+....             
T Consensus       164 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~  243 (404)
T 1i24_A          164 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD  243 (404)
T ss_dssp             SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred             CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccc
Confidence            35666521000        001123358999999999999999888899999999999999986320             


Q ss_pred             ---CChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHHHHHhhcCCCCCc---eEEEeccccCHHHHHHHHHHh---
Q 020110          203 ---LNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQVLLFESPAASG---RYLCTNGIYQFGDFAERVSKL---  270 (331)
Q Consensus       203 ---~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a~~~~l~~~~~~g---~~~~~~~~~s~~e~~~~i~~~---  270 (331)
                         ...+..++.++..|.++. +  +++.++|+|++|+|++++.+++.+...|   +|+++++++|+.|+++.+.+.   
T Consensus       244 ~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~~~~  323 (404)
T 1i24_A          244 AVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSK  323 (404)
T ss_dssp             TTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHT
T ss_pred             cchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHHHHh
Confidence               235667788888887764 3  4478999999999999999998765444   788877779999999999997   


Q ss_pred             CCCCCCCCCC-CCCC--CCccccccchHHHHhhCCCc-cCHHHHHHHHHHHHHHc
Q 020110          271 FPEFPVHRFD-GETQ--PGLIPCKDAAKRLMDLGLVF-TPVEDAVRETVESLKAK  321 (331)
Q Consensus       271 ~~~~~~~~~~-~~~~--~~~~~~~~~~~k~~~lG~~~-~~~~~~l~~~~~~~~~~  321 (331)
                      + +.+++... ....  .......+|++|+++|||+| .+++++++++++|++..
T Consensus       324 ~-g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~  377 (404)
T 1i24_A          324 L-GLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQF  377 (404)
T ss_dssp             T-TCCCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred             h-CCCccccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHhh
Confidence            5 33332111 1111  12234567899997899999 59999999999999764

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=6.3e-43  Score=311.01  Aligned_cols=300  Identities=19%  Similarity=0.229  Sum_probs=229.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCC--ccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   84 (331)
                      |+|||||||||||++|+++|++. |+ +|++++|+..  ....+..+.. .. +++++.+|++|++++.++++  ++|+|
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISE-SN-RYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSC-EEEEEECCCTTCCGGGGTTTTT-CT-TEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCC-eEEEEecCCCCCchhhhhhhhc-CC-CeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            37999999999999999999998 79 9999998652  2222322211 12 79999999999999999998  89999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC--CCC-------EEEEeCccceeccCCCCCC--------cccc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF--GVR-------RVVVTSSISAIVPNPGWKG--------KVFD  147 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-------~~v~~SS~~~~~~~~~~~~--------~~~~  147 (331)
                      ||+|+.........++...+++|+.++.+++++|.+.  +++       +|||+||.+ +|+......        .+++
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~-v~g~~~~~~~~~~~~~~~~~~  156 (361)
T 1kew_A           78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE-VYGDLPHPDEVENSVTLPLFT  156 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG-GGCCCCCGGGSCTTSCCCCBC
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHH-HhCCCcccccccccccCCCCC
Confidence            9999975432222346788999999999999999988  887       999999974 444322100        1678


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~  224 (331)
                      |+++..|.      +.|+.+|..+|.+++.++++.+++++++||+.+|||...+. ..+..++..+..+.++. +  +++
T Consensus       157 E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  229 (361)
T 1kew_A          157 ETTAYAPS------SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQ  229 (361)
T ss_dssp             TTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCC
T ss_pred             CCCCCCCC------CccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCce
Confidence            87765544      48999999999999999888899999999999999986432 34556677777776654 2  447


Q ss_pred             CCCceeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCCCCC---------CCCCCCCCccccccch
Q 020110          225 WLGAVPVKDVAKAQVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLFPEFPVHR---------FDGETQPGLIPCKDAA  294 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~---------~~~~~~~~~~~~~~~~  294 (331)
                      .++++|++|+|++++.++.....+++|++++ .++|+.|+++.+.+.++. +.+.         .............+|+
T Consensus       230 ~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~d~  308 (361)
T 1kew_A          230 IRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDE-IVPKATSYREQITYVADRPGHDRRYAIDA  308 (361)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHH-HSCCSSCGGGGEEEECCCTTCCCBCCBCC
T ss_pred             eEeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCC-cCccccccccceeecCCCCcccceeecCH
Confidence            7899999999999999997664444787765 569999999999988732 1110         0111111223457899


Q ss_pred             HHH-HhhCCCc-cCHHHHHHHHHHHHHHc
Q 020110          295 KRL-MDLGLVF-TPVEDAVRETVESLKAK  321 (331)
Q Consensus       295 ~k~-~~lG~~~-~~~~~~l~~~~~~~~~~  321 (331)
                      +|+ +.|||+| ++++++|+++++|++++
T Consensus       309 ~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  337 (361)
T 1kew_A          309 GKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             HHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence            999 7799999 59999999999999875

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-42  Score=304.93  Aligned_cols=302  Identities=15%  Similarity=0.130  Sum_probs=227.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhhcCCCC---CCCcEEEEEccCCCchHHHHHhcC--c
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGA---GDANLRVFEADVLDSGAVSRAVEG--C   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~--~   81 (331)
                      ||+|||||||||||++++++|+++|+ +|++++|+....  ..+..+...   .+.+++++.+|++|++++.+++++  +
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP   79 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCC
Confidence            57999999999999999999999999 999999875431  112221110   012788999999999999998875  7


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCC---CEEEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      |+|||+|+........+++...+++|+.++.++++++++.++   ++|||+||. .+|+...  ..+++|+++..|.   
T Consensus        80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~-~v~g~~~--~~~~~E~~~~~~~---  153 (372)
T 1db3_A           80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS-ELYGLVQ--EIPQKETTPFYPR---  153 (372)
T ss_dssp             SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG-GGGTTCC--SSSBCTTSCCCCC---
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCh-hhhCCCC--CCCCCccCCCCCC---
Confidence            999999998665445566778899999999999999999987   799999997 4454433  2578888876654   


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCC--cc--CcCCCCceeHH
Q 020110          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKD--TQ--EYHWLGAVPVK  232 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~--~~--~~~~~~~v~v~  232 (331)
                         +.|+.+|..+|.+++.++++++++++++|++++|||+.....  ..+..++..+..|...  ..  +++.++|+|++
T Consensus       154 ---~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  230 (372)
T 1db3_A          154 ---SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK  230 (372)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred             ---ChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHH
Confidence               489999999999999999888999999999999999864321  1233455566666532  23  45789999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCC-------CC------------------------C
Q 020110          233 DVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPEFPVH-------RF------------------------D  280 (331)
Q Consensus       233 D~a~a~~~~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~-------~~------------------------~  280 (331)
                      |+|++++.+++.+. .++|++ +++++|+.|+++.+.+.++. +.+       .+                        .
T Consensus       231 Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (372)
T 1db3_A          231 DYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGI-KLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDP  308 (372)
T ss_dssp             HHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTE-EEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECG
T ss_pred             HHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCC-Ccccccccccccccccccccccccccccccceeeccc
Confidence            99999999998764 467866 45679999999999999842 211       00                        0


Q ss_pred             C-CCCCCccccccchHHH-HhhCCCc-cCHHHHHHHHHHHHHHcC
Q 020110          281 G-ETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       281 ~-~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~~~~~  322 (331)
                      . ...........|++|+ +.|||+| ++++++|+++++|++++.
T Consensus       309 ~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  353 (372)
T 1db3_A          309 RYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAA  353 (372)
T ss_dssp             GGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             cccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhh
Confidence            0 0111223456799999 7799999 699999999999997653

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1.7e-42  Score=312.07  Aligned_cols=302  Identities=19%  Similarity=0.174  Sum_probs=226.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHH-HCCCCEEEEEecCCCcc---------chhh----cCCCC--CCCc---EEEEEccCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGSDS---------SHLF----ALPGA--GDAN---LRVFEADVLD   70 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~-~~g~~~V~~~~r~~~~~---------~~~~----~~~~~--~~~~---~~~~~~Dl~~   70 (331)
                      |+|||||||||||++|+++|+ +.|+ +|++++|+....         ..+.    .....  .. +   ++++.+|++|
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d   80 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPW-ADRYAALEVGDVRN   80 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTT-TTCCCEEEESCTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCC-EEEEEecCCcccccccccchHHHHHHHHHHhhcccccc-CCceEEEEECCCCC
Confidence            489999999999999999999 9999 999999875432         1221    11110  01 3   8899999999


Q ss_pred             chHHHHHhc--C-ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC-----C
Q 020110           71 SGAVSRAVE--G-CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-----K  142 (331)
Q Consensus        71 ~~~~~~~~~--~-~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~-----~  142 (331)
                      ++++.++++  + +|+|||+|+.........++...+++|+.++.+++++|++.++++|||+||. .+|+....     .
T Consensus        81 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~-~v~g~~~~~~~~~~  159 (397)
T 1gy8_A           81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSA-AIFGNPTMGSVSTN  159 (397)
T ss_dssp             HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG-GGTBSCCC-----C
T ss_pred             HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCH-HHhCCCCccccccc
Confidence            999999887  6 9999999997543212234678899999999999999999999999999997 55554330     1


Q ss_pred             CccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCC--------CCChhHHHH----
Q 020110          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP--------YLNASCAVL----  210 (331)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~--------~~~~~~~~~----  210 (331)
                      ..+++|+++..|.      +.|+.+|..+|.+++.++++.+++++++||+++|||....        ....+..++    
T Consensus       160 ~~~~~E~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~  233 (397)
T 1gy8_A          160 AEPIDINAKKSPE------SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVM  233 (397)
T ss_dssp             CCCBCTTSCCBCS------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHH
T ss_pred             ccCcCccCCCCCC------CchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHH
Confidence            3678888876554      4899999999999999988889999999999999997421        112233222    


Q ss_pred             HHHHcCCC------------Cc---------cCcCCCCceeHHHHHHHHHHhhcCCC-C-----C---ceEEEe-ccccC
Q 020110          211 QQLLQGSK------------DT---------QEYHWLGAVPVKDVAKAQVLLFESPA-A-----S---GRYLCT-NGIYQ  259 (331)
Q Consensus       211 ~~~~~~~~------------~~---------~~~~~~~~v~v~D~a~a~~~~l~~~~-~-----~---g~~~~~-~~~~s  259 (331)
                      .++..+..            +.         .+++.++|||++|+|++++.++.... .     .   ++|+++ ++++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s  313 (397)
T 1gy8_A          234 SDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYS  313 (397)
T ss_dssp             HHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEE
T ss_pred             HHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCccc
Confidence            14444432            22         23477899999999999999887532 1     2   678775 56799


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCCC-CCCCccccccchHHH-HhhCCCc-c-CHHHHHHHHHHHHHHc
Q 020110          260 FGDFAERVSKLFPEFPVHRFDGE-TQPGLIPCKDAAKRL-MDLGLVF-T-PVEDAVRETVESLKAK  321 (331)
Q Consensus       260 ~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~-~~lG~~~-~-~~~~~l~~~~~~~~~~  321 (331)
                      +.|+++.+.+.++ .+++..... .........+|++|+ +.|||+| . +++++|+++++|++++
T Consensus       314 ~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~  378 (397)
T 1gy8_A          314 VREVIEVARKTTG-HPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (397)
T ss_dssp             HHHHHHHHHHHHC-CCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhC-CCCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence            9999999999984 333321111 112334577899999 7899999 4 9999999999999876

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-43  Score=303.13  Aligned_cols=272  Identities=17%  Similarity=0.131  Sum_probs=220.0

Q ss_pred             CCC-eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEE
Q 020110            8 EEE-TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (331)
Q Consensus         8 ~~~-~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   84 (331)
                      .|+ +|||||||||||++++++|+++|+ +|++++|.                     .+|+.|.+++.++++  ++|+|
T Consensus         3 ~M~m~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~---------------------~~D~~d~~~~~~~~~~~~~d~v   60 (287)
T 3sc6_A            3 AMKERVIITGANGQLGKQLQEELNPEEY-DIYPFDKK---------------------LLDITNISQVQQVVQEIRPHII   60 (287)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHSCTTTE-EEEEECTT---------------------TSCTTCHHHHHHHHHHHCCSEE
T ss_pred             cceeEEEEECCCCHHHHHHHHHHHhCCC-EEEEeccc---------------------ccCCCCHHHHHHHHHhcCCCEE
Confidence            355 999999999999999999999999 99999882                     289999999999998  69999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcch
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (331)
                      ||+|+......+..++...+++|+.++.+++++|++.++ +|||+||.+ +|+...  ..+++|+++..|.      +.|
T Consensus        61 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~-vy~~~~--~~~~~E~~~~~p~------~~Y  130 (287)
T 3sc6_A           61 IHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDY-VFQGDR--PEGYDEFHNPAPI------NIY  130 (287)
T ss_dssp             EECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGG-GSCCCC--SSCBCTTSCCCCC------SHH
T ss_pred             EECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhh-hcCCCC--CCCCCCCCCCCCC------CHH
Confidence            999998765444466888999999999999999999987 799999984 454433  3689999877665      489


Q ss_pred             hHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHhhc
Q 020110          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFE  243 (331)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~  243 (331)
                      +.+|..+|++++.+    ..+++++||+.+|||...   .....++..+..+.++. .+++.++|+|++|+|++++.++.
T Consensus       131 ~~sK~~~E~~~~~~----~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  203 (287)
T 3sc6_A          131 GASKYAGEQFVKEL----HNKYFIVRTSWLYGKYGN---NFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIH  203 (287)
T ss_dssp             HHHHHHHHHHHHHH----CSSEEEEEECSEECSSSC---CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHh----CCCcEEEeeeeecCCCCC---cHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHh
Confidence            99999999999855    347899999999999753   34556666776677666 57788999999999999999999


Q ss_pred             CCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCC------CCCCCCccccccchHHHHhhCCCc-cCHHHHHHHHH
Q 020110          244 SPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFD------GETQPGLIPCKDAAKRLMDLGLVF-TPVEDAVRETV  315 (331)
Q Consensus       244 ~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~k~~~lG~~~-~~~~~~l~~~~  315 (331)
                      ++. .|+|+++ ++.+|+.|+++.+++.++. +.+...      ...........+|++|++.|||.| ++++++|++++
T Consensus       204 ~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~  281 (287)
T 3sc6_A          204 TSL-YGTYHVSNTGSCSWFEFAKKIFSYANM-KVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFF  281 (287)
T ss_dssp             SCC-CEEEECCCBSCEEHHHHHHHHHHHHTC-CCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHH
T ss_pred             CCC-CCeEEEcCCCcccHHHHHHHHHHHcCC-CcceeeeehhhcCcccCCCCcccccHHHHHhhCCCCCccHHHHHHHHH
Confidence            877 6788765 5669999999999999843 222111      111123345678999999999999 69999999999


Q ss_pred             HHHHH
Q 020110          316 ESLKA  320 (331)
Q Consensus       316 ~~~~~  320 (331)
                      +|+++
T Consensus       282 ~~~~~  286 (287)
T 3sc6_A          282 IETKS  286 (287)
T ss_dssp             HHTC-
T ss_pred             HHHhc
Confidence            99865

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-42  Score=307.05  Aligned_cols=301  Identities=15%  Similarity=0.121  Sum_probs=228.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhhcCCCC----CCCcEEEEEccCCCchHHHHHhcC--c
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGA----GDANLRVFEADVLDSGAVSRAVEG--C   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~--~   81 (331)
                      |+|||||||||||++|+++|+++|+ +|++++|+....  ..+..+...    ...+++++.+|++|++++.+++++  +
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  103 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP  103 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence            7899999999999999999999999 999999976431  112221100    111788999999999999998875  6


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCC---CEEEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      |+|||+|+.........++...+++|+.++.+++++|++.++   ++|||+||.++ |+...  ..+++|+++..|.   
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~-~~~~~--~~~~~E~~~~~~~---  177 (375)
T 1t2a_A          104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSEL-YGKVQ--EIPQKETTPFYPR---  177 (375)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG-TCSCS--SSSBCTTSCCCCC---
T ss_pred             CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhh-hCCCC--CCCCCccCCCCCC---
Confidence            999999997543222244677899999999999999999887   89999999744 44333  2678898876554   


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCC--c--cCcCCCCceeHH
Q 020110          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKD--T--QEYHWLGAVPVK  232 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~--~--~~~~~~~~v~v~  232 (331)
                         +.|+.+|..+|.+++.++++++++++++||+++|||+.....  ..+..++.++..|...  .  .+++.++|+|++
T Consensus       178 ---~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  254 (375)
T 1t2a_A          178 ---SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAK  254 (375)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHH
T ss_pred             ---ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHH
Confidence               489999999999999998888999999999999999764322  1123445566666533  2  345789999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCC-------CC------------CC---CCCCCccc
Q 020110          233 DVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPEFPVH-------RF------------DG---ETQPGLIP  289 (331)
Q Consensus       233 D~a~a~~~~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~-------~~------------~~---~~~~~~~~  289 (331)
                      |+|++++.+++.+. .++|++ +++++|+.|+++.+.+.++. +.+       .+            ..   ........
T Consensus       255 Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (375)
T 1t2a_A          255 DYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGK-TIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDF  332 (375)
T ss_dssp             HHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTC-CEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCB
T ss_pred             HHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCC-CcccccccccccccccccccceeecCcccCCcccchh
Confidence            99999999998764 477866 55679999999999999843 221       00            00   01112334


Q ss_pred             cccchHHH-HhhCCCc-cCHHHHHHHHHHHHHHcC
Q 020110          290 CKDAAKRL-MDLGLVF-TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       290 ~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~~~~~  322 (331)
                      ..+|++|+ +.|||+| ++++++|+++++|+++..
T Consensus       333 ~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  367 (375)
T 1t2a_A          333 LQGDCTKAKQKLNWKPRVAFDELVREMVHADVELM  367 (375)
T ss_dssp             CCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             hcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHhh
Confidence            56799999 7799999 599999999999998754

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=3.1e-43  Score=303.05  Aligned_cols=270  Identities=14%  Similarity=0.111  Sum_probs=214.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC-ccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-CKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~d~vih~   87 (331)
                      ||+||||| +||||++|+++|+++|+ +|++++|+.....         . +++++.+|+.|++++.+++++ +|+|||+
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---------~-~~~~~~~Dl~d~~~~~~~~~~~~d~vih~   70 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGH-EVTGLRRSAQPMP---------A-GVQTLIADVTRPDTLASIVHLRPEILVYC   70 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTC-CEEEEECTTSCCC---------T-TCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCC-EEEEEeCCccccc---------c-CCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence            57999999 59999999999999999 9999999865421         1 788999999999999988887 9999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |+...     .++...+++|+.++.+++++|++.++++|||+||. .+|+...  ..+++|+++..|.      +.|+.+
T Consensus        71 a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~-~vyg~~~--~~~~~E~~~~~p~------~~Y~~s  136 (286)
T 3gpi_A           71 VAASE-----YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSST-GVYGQEV--EEWLDEDTPPIAK------DFSGKR  136 (286)
T ss_dssp             HHHHH-----HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEG-GGCCCCC--SSEECTTSCCCCC------SHHHHH
T ss_pred             CCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEccc-EEEcCCC--CCCCCCCCCCCCC------ChhhHH
Confidence            98643     23567788999999999999999999999999998 5555443  3678999887665      489999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCC-ccCcCCCCceeHHHHHHHHHHhhcC--
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD-TQEYHWLGAVPVKDVAKAQVLLFES--  244 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~l~~--  244 (331)
                      |..+|++ +.    . ++++++||+++|||...       .++..+.. ... ..++..++|+|++|+|++++.++..  
T Consensus       137 K~~~E~~-~~----~-~~~~ilR~~~v~G~~~~-------~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  202 (286)
T 3gpi_A          137 MLEAEAL-LA----A-YSSTILRFSGIYGPGRL-------RMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLIQQRS  202 (286)
T ss_dssp             HHHHHHH-GG----G-SSEEEEEECEEEBTTBC-------HHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHH-Hh----c-CCeEEEecccccCCCch-------hHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHHhhhc
Confidence            9999998 63    3 99999999999999853       23344433 222 2456789999999999999999987  


Q ss_pred             -CCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHHHhhCCCc-c-CHHHHHHHHHHHHHH
Q 020110          245 -PAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVF-T-PVEDAVRETVESLKA  320 (331)
Q Consensus       245 -~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~-~-~~~~~l~~~~~~~~~  320 (331)
                       ...+++|+++ ++++|+.|+++.+.+.++ .+.+.....  .......+|++|++.|||+| . +++++|+++++|++.
T Consensus       203 ~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~--~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~~  279 (286)
T 3gpi_A          203 HAVPERLYIVTDNQPLPVHDLLRWLADRQG-IAYPAGATP--PVQGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMRE  279 (286)
T ss_dssp             TSCCCSEEEECCSCCEEHHHHHHHHHHHTT-CCCCCSCCC--CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHTC
T ss_pred             cCCCCceEEEeCCCCCCHHHHHHHHHHHcC-CCCCCCCCc--ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHhc
Confidence             3455688776 567999999999999994 333322221  34556789999999999999 4 799999999999865


Q ss_pred             c
Q 020110          321 K  321 (331)
Q Consensus       321 ~  321 (331)
                      +
T Consensus       280 ~  280 (286)
T 3gpi_A          280 G  280 (286)
T ss_dssp             -
T ss_pred             c
Confidence            4

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1.6e-42  Score=303.50  Aligned_cols=284  Identities=17%  Similarity=0.169  Sum_probs=220.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      +|+|||||||||||++|+++|+++|+ +|+++.|+.                    .+|+.|.+++.++++  ++|+|||
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~-~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~~~d~vih   61 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTRD--------------------ELNLLDSRAVHDFFASERIDQVYL   61 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCTT--------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEecCc--------------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence            46899999999999999999999999 999887642                    279999999999998  8999999


Q ss_pred             cccCCCC-CCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCC----CChhhhhccC
Q 020110           87 VASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW----TDLEYCKSRK  161 (331)
Q Consensus        87 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~----~~~~~~~~~~  161 (331)
                      +|+.... .....++...+++|+.++.+++++|++.++++|||+||.+ +|+...  ..+++|+++    ..|.     .
T Consensus        62 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~-vyg~~~--~~~~~E~~~~~~~~~p~-----~  133 (321)
T 1e6u_A           62 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSC-IYPKLA--KQPMAESELLQGTLEPT-----N  133 (321)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGG-GSCTTC--CSSBCGGGTTSSCCCGG-----G
T ss_pred             cCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHH-HcCCCC--CCCcCccccccCCCCCC-----C
Confidence            9997542 1112346778999999999999999999999999999974 454433  267888763    3332     1


Q ss_pred             cchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHHHHHc----C-CCCc---cCcCCCCcee
Q 020110          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQ----G-SKDT---QEYHWLGAVP  230 (331)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~----~-~~~~---~~~~~~~~v~  230 (331)
                      +.|+.+|..+|.+++.++++.+++++++||+++|||+....   ...+..++..+..    | .++.   .+++.++|+|
T Consensus       134 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~  213 (321)
T 1e6u_A          134 EPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLH  213 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEE
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEE
Confidence            37999999999999999888899999999999999986431   1344555665543    3 3433   3557899999


Q ss_pred             HHHHHHHHHHhhcCCCC---------CceEEEe-ccccCHHHHHHHHHHhCCCCCCCC-CCCCCCCCccccccchHHHHh
Q 020110          231 VKDVAKAQVLLFESPAA---------SGRYLCT-NGIYQFGDFAERVSKLFPEFPVHR-FDGETQPGLIPCKDAAKRLMD  299 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~~---------~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~  299 (331)
                      ++|+|++++.++..+..         .++|+++ ++++|+.|+++.+.+.++. +.+. +............+|++|++.
T Consensus       214 v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~  292 (321)
T 1e6u_A          214 VDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGY-KGRVVFDASKPDGTPRKLLDVTRLHQ  292 (321)
T ss_dssp             HHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTC-CSEEEEETTSCCCCSBCCBCCHHHHH
T ss_pred             HHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCC-CCceEeCCCCCCCcccccCCHHHHHh
Confidence            99999999999987654         3578774 5679999999999999843 2221 111111234456889999933


Q ss_pred             hCCCc-cCHHHHHHHHHHHHHHcC
Q 020110          300 LGLVF-TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       300 lG~~~-~~~~~~l~~~~~~~~~~~  322 (331)
                      |||+| ++++++|+++++|++++.
T Consensus       293 lG~~p~~~~~~~l~~~~~~~~~~~  316 (321)
T 1e6u_A          293 LGWYHEISLEAGLASTYQWFLENQ  316 (321)
T ss_dssp             TTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred             cCCccCCcHHHHHHHHHHHHHHHH
Confidence            99999 599999999999998763

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=8.7e-42  Score=301.38  Aligned_cols=306  Identities=25%  Similarity=0.323  Sum_probs=229.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC-CCCCcEEEE-EccCCCchHHHHHhcCccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVF-EADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~-~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      ++|+|||||||||||++++++|+++|+ +|++++|+......+..... ..+.+++++ .+|++|++++.++++++|+||
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   88 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence            457999999999999999999999999 99999997654332221100 000178888 899999999999999999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHh-CCCCEEEEeCccceeccCCC-CCCccccCCCCCChhh-------
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR-FGVRRVVVTSSISAIVPNPG-WKGKVFDETSWTDLEY-------  156 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS~~~~~~~~~-~~~~~~~E~~~~~~~~-------  156 (331)
                      |+|+....   ..++...+++|+.++.+++++|++ .++++|||+||.++++.... ..+.+++|+++.....       
T Consensus        89 h~A~~~~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  165 (342)
T 1y1p_A           89 HIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP  165 (342)
T ss_dssp             ECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred             EeCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccc
Confidence            99997654   245788999999999999999984 57899999999866543221 1225788887421100       


Q ss_pred             ---hhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCCc-cCc-CCCC
Q 020110          157 ---CKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT-QEY-HWLG  227 (331)
Q Consensus       157 ---~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~-~~~-~~~~  227 (331)
                         ...+.+.|+.+|..+|.+++.+++++  +++++++||+++|||...+..  .....++.++..|.+.. .++ +.++
T Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (342)
T 1y1p_A          166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQY  245 (342)
T ss_dssp             TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEE
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCC
Confidence               01122479999999999999988765  789999999999999865422  25567777888887765 333 6789


Q ss_pred             ceeHHHHHHHHHHhhcCCCCCc-eEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHH-HhhCC---
Q 020110          228 AVPVKDVAKAQVLLFESPAASG-RYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRL-MDLGL---  302 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~~~g-~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~---  302 (331)
                      |+|++|+|++++.++..+...| .|+++++.+|+.|+++.+.+.+|...++.....  .......+|++|+ +.|||   
T Consensus       246 ~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~--~~~~~~~~d~~k~~~~lg~~~~  323 (342)
T 1y1p_A          246 YVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPD--QGQDLSKFDTAPSLEILKSLGR  323 (342)
T ss_dssp             EEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCC--CCCCCCEECCHHHHHHHHHTTC
T ss_pred             EeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCc--cccccccCChHHHHHHHhhccc
Confidence            9999999999999998765555 566777789999999999999964333322111  1122366799999 77887   


Q ss_pred             Cc-cCHHHHHHHHHHHHH
Q 020110          303 VF-TPVEDAVRETVESLK  319 (331)
Q Consensus       303 ~~-~~~~~~l~~~~~~~~  319 (331)
                      .+ ++++++|+++++|++
T Consensus       324 ~~~~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          324 PGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             CSCCCHHHHHHHHHCCSC
T ss_pred             CCcCCHHHHHHHHHHHhh
Confidence            34 799999999999874

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=2.4e-41  Score=297.52  Aligned_cols=294  Identities=21%  Similarity=0.194  Sum_probs=220.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc-hhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKG   83 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   83 (331)
                      .+||+|||||||||||++|+++|+++|+ +|++++|+..... .+...    . +++++.+|++|++++.+++++  +|+
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~l~~~----~-~~~~~~~Dl~d~~~~~~~~~~~~~D~   92 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGD-KVVGIDNFATGRREHLKDH----P-NLTFVEGSIADHALVNQLIGDLQPDA   92 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGSCCC----T-TEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCCccchhhHhhc----C-CceEEEEeCCCHHHHHHHHhccCCcE
Confidence            4578999999999999999999999999 9999999754322 12111    1 789999999999999999987  999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccC-CCCCCccccCCCCCChhhhhccCc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPN-PGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      |||+|+..... ...++.  +++|+.++.+++++|++.++++|||+||.+ +|+. +.....+++|++  .|.     .+
T Consensus        93 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~-~~g~~~~~~~~~~~E~~--~p~-----~~  161 (333)
T 2q1w_A           93 VVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTAL-CYGVKPIQQPVRLDHPR--NPA-----NS  161 (333)
T ss_dssp             EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GGCSCCCSSSBCTTSCC--CCT-----TC
T ss_pred             EEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHH-HhCCCcccCCCCcCCCC--CCC-----CC
Confidence            99999976542 222233  899999999999999999999999999974 4541 101112677776  222     04


Q ss_pred             chhHHHHHHHHHHHH-HHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCcc-CcCCCCceeHHHHHHHHHH
Q 020110          163 WYPVSKTLAEKAAWE-FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVL  240 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~-~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~D~a~a~~~  240 (331)
                      .|+.+|..+|.+++. ++     +++++||+++|||+..  ......++..+..+. ... ++..++++|++|+|++++.
T Consensus       162 ~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~ai~~  233 (333)
T 2q1w_A          162 SYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGK-KCFVTKARRDFVFVKDLARATVR  233 (333)
T ss_dssp             HHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTC-CCEEEECEECEEEHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCC-eeeCCCceEeeEEHHHHHHHHHH
Confidence            899999999999975 43     8999999999999832  234556666666665 223 4578899999999999999


Q ss_pred             hhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCC--CC-CCCccccccchHHHHhhCCCc-cCHHHHHHHHH
Q 020110          241 LFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDG--ET-QPGLIPCKDAAKRLMDLGLVF-TPVEDAVRETV  315 (331)
Q Consensus       241 ~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~k~~~lG~~~-~~~~~~l~~~~  315 (331)
                      ++..+. +++|+++ +..+|+.|+++.+.+.++..++...+.  +. ........+|++|++.+||+| ++++++|++++
T Consensus       234 ~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~  312 (333)
T 2q1w_A          234 AVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAV  312 (333)
T ss_dssp             HHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCSSCCCCEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHH
T ss_pred             HHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCceeCCCCCcccccccccccCCHHHHHhcCCCcCCCHHHHHHHHH
Confidence            998776 5578765 567999999999999995431111110  00 012256778999994449999 69999999999


Q ss_pred             HHHHHcCCCCc
Q 020110          316 ESLKAKGFLGQ  326 (331)
Q Consensus       316 ~~~~~~~~~~~  326 (331)
                      +|+++++.++.
T Consensus       313 ~~~~~~~~~~~  323 (333)
T 2q1w_A          313 AYFREYGVSGG  323 (333)
T ss_dssp             HHHHHHCC---
T ss_pred             HHHHHHCCCCC
Confidence            99999987653

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=6.2e-42  Score=304.15  Aligned_cols=291  Identities=16%  Similarity=0.122  Sum_probs=225.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-----Ccc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d   82 (331)
                      +|+|||||||||||++|+++|+++| + +|++++|+..... ...+.     ++. +.+|+++.+.+.++++     ++|
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~-~~~~~-----~~~-~~~d~~~~~~~~~~~~~~~~~~~d  117 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGIT-DILVVDNLKDGTK-FVNLV-----DLN-IADYMDKEDFLIQIMAGEEFGDVE  117 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCC-CEEEEECCSSGGG-GGGTT-----TSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCc-EEEEEecCCCcch-hhccc-----Cce-EeeecCcHHHHHHHHhhcccCCCC
Confidence            4689999999999999999999999 8 9999998764421 11221     223 6799999999998887     599


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      +|||+|+....  ...++...+++|+.++.+++++|++.++ +|||+||.+ +|+...  ..+++|+++..|.      +
T Consensus       118 ~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~-v~g~~~--~~~~~E~~~~~p~------~  185 (357)
T 2x6t_A          118 AIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAA-TYGGRT--SDFIESREYEKPL------N  185 (357)
T ss_dssp             EEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGG-GGCSCS--SCCCSSGGGCCCS------S
T ss_pred             EEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchH-HhCCCC--CCCcCCcCCCCCC------C
Confidence            99999997654  3455788999999999999999999888 999999984 454433  2578888765554      4


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHHHHHcCCCCc-c--CcC-CCCceeHHHHH
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDT-Q--EYH-WLGAVPVKDVA  235 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~-~~~~v~v~D~a  235 (331)
                      .|+.+|..+|.+++.++++.+++++++||+++|||+....   ...+..++..+..+.++. .  ++. .++|+|++|+|
T Consensus       186 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  265 (357)
T 2x6t_A          186 VFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA  265 (357)
T ss_dssp             HHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHH
Confidence            8999999999999999878899999999999999986421   134556677777777654 3  346 78999999999


Q ss_pred             HHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCC---CCCccccccchHHHHhhCC-Cc-cCHHH
Q 020110          236 KAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGET---QPGLIPCKDAAKRLMDLGL-VF-TPVED  309 (331)
Q Consensus       236 ~a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~k~~~lG~-~~-~~~~~  309 (331)
                      ++++.+++.+. +++|+++ ++.+|+.|+++.+.+.++..++.......   .........|++|+++||| .| +++++
T Consensus       266 ~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~l~e  344 (357)
T 2x6t_A          266 DVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAE  344 (357)
T ss_dssp             HHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCCCCHHH
T ss_pred             HHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccccccccccccCHHHHHHcCCCCCCCCHHH
Confidence            99999998776 6688775 56799999999999998543222111111   0123346778999977999 67 69999


Q ss_pred             HHHHHHHHHHH
Q 020110          310 AVRETVESLKA  320 (331)
Q Consensus       310 ~l~~~~~~~~~  320 (331)
                      +|+++++|+++
T Consensus       345 ~l~~~~~~~~~  355 (357)
T 2x6t_A          345 GVTEYMAWLNR  355 (357)
T ss_dssp             HHHHHHHHHC-
T ss_pred             HHHHHHHHHhh
Confidence            99999999965

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=2.4e-41  Score=297.11  Aligned_cols=292  Identities=18%  Similarity=0.165  Sum_probs=221.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   85 (331)
                      +.|+|||||||||||++|+++|+++|+ +|++++|+...........   . +++++.+|++|.+++.++++  ++|+||
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~l---~-~v~~~~~Dl~d~~~~~~~~~~~~~D~vi   93 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNFATGKREVLPPV---A-GLSVIEGSVTDAGLLERAFDSFKPTHVV   93 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECCSSSCGGGSCSC---T-TEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCccchhhhhcc---C-CceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence            346999999999999999999999999 9999999654432111111   1 78999999999999999998  899999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      |+|+..... ...++ . +++|+.++.+++++|.+.++++|||+||.++ |+.......+++|++  .+      .+.|+
T Consensus        94 h~A~~~~~~-~~~~~-~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~-~~~~~~~~~~~~E~~--~~------~~~Y~  161 (330)
T 2pzm_A           94 HSAAAYKDP-DDWAE-D-AATNVQGSINVAKAASKAGVKRLLNFQTALC-YGRPATVPIPIDSPT--AP------FTSYG  161 (330)
T ss_dssp             ECCCCCSCT-TCHHH-H-HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGG-GCSCSSSSBCTTCCC--CC------CSHHH
T ss_pred             ECCccCCCc-cccCh-h-HHHHHHHHHHHHHHHHHcCCCEEEEecCHHH-hCCCccCCCCcCCCC--CC------CChHH
Confidence            999976542 22223 3 8999999999999999889999999999844 543321112677876  22      24899


Q ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC-CCCceeHHHHHH-HHHHhhc
Q 020110          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH-WLGAVPVKDVAK-AQVLLFE  243 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~D~a~-a~~~~l~  243 (331)
                      .+|..+|.+++.+    +++++++||+++|||+..  ......++..+..+. ..+++. .++++|++|+|+ +++.++.
T Consensus       162 ~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~a~~~~~~  234 (330)
T 2pzm_A          162 ISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQ-KCFCSDTVRDFLDMSDFLAIADLSLQE  234 (330)
T ss_dssp             HHHHHHHHHHHTC----SSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTC-CCCEESCEECEEEHHHHHHHHHHHTST
T ss_pred             HHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCC-EEeCCCCEecceeHHHHHHHHHHHHhh
Confidence            9999999998743    899999999999999852  234455566666665 333322 789999999999 9999998


Q ss_pred             CCCCCceEEEec-cccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHH-----HhhCCCc-cCHHHHHHHHHH
Q 020110          244 SPAASGRYLCTN-GIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRL-----MDLGLVF-TPVEDAVRETVE  316 (331)
Q Consensus       244 ~~~~~g~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-----~~lG~~~-~~~~~~l~~~~~  316 (331)
                      .+. +++|++++ ..+|+.|+++.+.+.++..++...+ .. .......+|++|+     +.|||+| ++++++|+++++
T Consensus       235 ~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~-~~-~~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~  311 (330)
T 2pzm_A          235 GRP-TGVFNVSTGEGHSIKEVFDVVLDYVGATLAEPVP-VV-APGADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLA  311 (330)
T ss_dssp             TCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCSSCCC-EE-CCCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHH
T ss_pred             cCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCCCceeCC-CC-cchhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHH
Confidence            765 55787765 6799999999999998543211111 10 1233455666666     7799999 699999999999


Q ss_pred             HHHHcCCCCc
Q 020110          317 SLKAKGFLGQ  326 (331)
Q Consensus       317 ~~~~~~~~~~  326 (331)
                      |+++++.+..
T Consensus       312 ~~~~~~~~~~  321 (330)
T 2pzm_A          312 WYDKYGVTDI  321 (330)
T ss_dssp             HHHHHCSCSC
T ss_pred             HHHhhCcccc
Confidence            9999988753

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=5.6e-42  Score=299.53  Aligned_cols=293  Identities=21%  Similarity=0.267  Sum_probs=223.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHHC--CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110           11 TVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      +|||||||||||++|+++|+++  |+ +|++++|+.....           +++++.+|++|++++.++++  ++|+|||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKK-NVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGG-GEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCC-EEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            5899999999999999999998  78 9999988754321           35678999999999999987  8999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +|+..... ...++...+++|+.++.+++++|++.++++|||+||.++ |+... +..+.+|+++..|.      +.|+.
T Consensus        69 ~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~-~~~~~-~~~~~~e~~~~~p~------~~Y~~  139 (317)
T 3ajr_A           69 LAGILSAK-GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGV-FGPET-PKNKVPSITITRPR------TMFGV  139 (317)
T ss_dssp             CCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG-CCTTS-CSSSBCSSSCCCCC------SHHHH
T ss_pred             CCcccCCc-cccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHH-hCCCC-CCCCccccccCCCC------chHHH
Confidence            99875421 123467789999999999999999999999999999854 44322 12456777665554      48999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC---ChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHHHHHHH
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVL  240 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~~~  240 (331)
                      +|..+|.+++.++++++++++++||+.+||+...+..   ......+.+...+....   .+++.++|+|++|+|++++.
T Consensus       140 sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  219 (317)
T 3ajr_A          140 TKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVD  219 (317)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHH
Confidence            9999999999988888999999999999998643321   22333334444444332   34578999999999999999


Q ss_pred             hhcCCCC----CceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCC--CCccccccchHHH-HhhCCCc-cCHHHHHH
Q 020110          241 LFESPAA----SGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQ--PGLIPCKDAAKRL-MDLGLVF-TPVEDAVR  312 (331)
Q Consensus       241 ~l~~~~~----~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~  312 (331)
                      ++.++..    +++|++++..+|+.|+++.+.+.+|..+++..+....  .......+|++|+ +.|||+| .+++++|+
T Consensus       220 ~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~  299 (317)
T 3ajr_A          220 LYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTID  299 (317)
T ss_dssp             HHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSCCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHH
T ss_pred             HHhCCccccccCceEecCCccccHHHHHHHHHHHCCccccccccccchhhccccccccCHHHHHHHcCCCCCCCHHHHHH
Confidence            9987642    2579887777999999999999986433322111000  0112346799999 7899999 59999999


Q ss_pred             HHHHHHHHcCCC
Q 020110          313 ETVESLKAKGFL  324 (331)
Q Consensus       313 ~~~~~~~~~~~~  324 (331)
                      ++++|++++...
T Consensus       300 ~~~~~~~~~~~~  311 (317)
T 3ajr_A          300 DMIDHISEKLGI  311 (317)
T ss_dssp             HHHHHHHHHTTS
T ss_pred             HHHHHHHhhhcc
Confidence            999999876543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=2.2e-41  Score=298.45  Aligned_cols=303  Identities=17%  Similarity=0.152  Sum_probs=220.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      |+|||||||||||++++++|+++|+ +|++++|..... .....+....+.++.++.+|++|++++.++++  ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih   79 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence            3899999999999999999999999 999998743321 11111000000167889999999999988886  4999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +|+.........++...+++|+.++.++++++++.++++|||+||. .+|+...  ..+++|+++..|.     .+.|+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~-~~~g~~~--~~~~~e~~~~~~~-----~~~Y~~  151 (338)
T 1udb_A           80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSA-TVYGDNP--KIPYVESFPTGTP-----QSPYGK  151 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEG-GGGCSCC--SSSBCTTSCCCCC-----SSHHHH
T ss_pred             CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccH-HHhCCCC--CCCcCcccCCCCC-----CChHHH
Confidence            9996542212234567899999999999999998889999999997 4555433  2577887765431     248999


Q ss_pred             HHHHHHHHHHHHHHHc-CCeEEEEcCCcccCCCCC------CC--CChhHHHHHHHHc--CCCCc---------cCcCCC
Q 020110          167 SKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQ------PY--LNASCAVLQQLLQ--GSKDT---------QEYHWL  226 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~-~~~~~~lR~~~v~G~~~~------~~--~~~~~~~~~~~~~--~~~~~---------~~~~~~  226 (331)
                      +|..+|.+++.++++. +++++++||+++|||...      +.  ...+...+.+...  +..+.         .+++.+
T Consensus       152 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  231 (338)
T 1udb_A          152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR  231 (338)
T ss_dssp             HHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEE
T ss_pred             HHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceee
Confidence            9999999999998776 899999999999998531      11  1112223333332  22221         234678


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCC-ceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCC-CCCCccccccchHHH-Hhh
Q 020110          227 GAVPVKDVAKAQVLLFESP--AAS-GRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGE-TQPGLIPCKDAAKRL-MDL  300 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~-g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~-~~l  300 (331)
                      +|||++|+|++++.+++..  ... ++|+++ +.++|+.|+++.+.+.++ .+++..... ..........|++|+ +.|
T Consensus       232 ~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  310 (338)
T 1udb_A          232 DYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACG-KPVNYHFAPRREGDLPAYWADASKADREL  310 (338)
T ss_dssp             CEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHT-SCCCEEEECCCTTCCSBCCBCCHHHHHHH
T ss_pred             eeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhC-CCCcceeCCCCCCchhhhhcCHHHHHHHc
Confidence            9999999999999988753  233 378775 567999999999999984 333322111 112234567899999 789


Q ss_pred             CCCc-cCHHHHHHHHHHHHHHcC
Q 020110          301 GLVF-TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       301 G~~~-~~~~~~l~~~~~~~~~~~  322 (331)
                      ||+| .+++++|+++++|++++.
T Consensus       311 G~~p~~~l~~~l~~~~~w~~~~~  333 (338)
T 1udb_A          311 NWRVTRTLDEMAQDTWHWQSRHP  333 (338)
T ss_dssp             CCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             CCCcCCCHHHHHHHHHHHHHhcc
Confidence            9999 599999999999998764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=6.2e-41  Score=296.27  Aligned_cols=299  Identities=15%  Similarity=0.134  Sum_probs=228.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc--hhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~v   84 (331)
                      +|+|||||||||||++++++|+++|+ +|++++|+.....  .+..... .. +++++.+|++|++++.+++++  +|+|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~d~~~~~~~~~~~~~d~v   79 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGI-EN-DVKIIHMDLLEFSNIIRTIEKVQPDEV   79 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTC-TT-TEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccc-cC-ceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence            46999999999999999999999999 9999999765432  2222211 11 689999999999999998875  6999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCC-CEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (331)
                      ||+|+........+++...+++|+.++.+++++|++.++ ++|||+||. .+|+...  ..+++|+++..|.      +.
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~-~vyg~~~--~~~~~e~~~~~~~------~~  150 (345)
T 2z1m_A           80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTS-EMFGKVQ--EIPQTEKTPFYPR------SP  150 (345)
T ss_dssp             EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEG-GGGCSCS--SSSBCTTSCCCCC------SH
T ss_pred             EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEech-hhcCCCC--CCCCCccCCCCCC------Ch
Confidence            999997653323456788999999999999999998887 899999997 4555443  2578888766554      48


Q ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCCc--c--CcCCCCceeHHHHHHH
Q 020110          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVPVKDVAKA  237 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~v~v~D~a~a  237 (331)
                      |+.+|..+|.+++.++++.+++++++|++++|||+.....  ..+...+.++..+....  .  ++..++|+|++|+|++
T Consensus       151 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a  230 (345)
T 2z1m_A          151 YAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEA  230 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHH
Confidence            9999999999999998888999999999999999854321  11223344555664322  3  3467899999999999


Q ss_pred             HHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCC-------CC------------CC---CCCCCccccccch
Q 020110          238 QVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPEFPVH-------RF------------DG---ETQPGLIPCKDAA  294 (331)
Q Consensus       238 ~~~~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~-------~~------------~~---~~~~~~~~~~~~~  294 (331)
                      ++.++..+. .++|++ +++.+|+.|+++.+.+.++. +.+       .+            ..   ...........|+
T Consensus       231 ~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  308 (345)
T 2z1m_A          231 MWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGF-DIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNP  308 (345)
T ss_dssp             HHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTC-CEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC
T ss_pred             HHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCC-CccccccccccccccccccccccccCcccCCCCCcceeecCH
Confidence            999998764 467866 55679999999999999953 211       00            00   0111223456799


Q ss_pred             HHH-HhhCCCc-cCHHHHHHHHHHHHHHc
Q 020110          295 KRL-MDLGLVF-TPVEDAVRETVESLKAK  321 (331)
Q Consensus       295 ~k~-~~lG~~~-~~~~~~l~~~~~~~~~~  321 (331)
                      +|+ +.|||+| ++++++|+++++|++++
T Consensus       309 ~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  337 (345)
T 2z1m_A          309 EKAMKKLGWKPRTTFDELVEIMMEADLKR  337 (345)
T ss_dssp             HHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence            999 7899999 69999999999999875

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-42  Score=299.35  Aligned_cols=290  Identities=17%  Similarity=0.131  Sum_probs=212.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC-----ccEE
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-----CKGV   84 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~d~v   84 (331)
                      +|||||||||||++|+++|+++| + +|++++|+...... ..+.     ++. +.+|+++.+.+.+++++     +|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~-~~~~-----~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v   72 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGIT-DILVVDNLKDGTKF-VNLV-----DLN-IADYMDKEDFLIQIMAGEEFGDVEAI   72 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCC-CEEEEECCSSGGGG-HHHH-----TSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCc-EEEEEccCCCCchh-hhcC-----cce-eccccccHHHHHHHHhccccCCCcEE
Confidence            58999999999999999999999 8 99999987654211 1110     223 67899999999998875     9999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcch
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (331)
                      ||+|+....  ...++...+++|+.++.+++++|++.++ +|||+||.+ +|+...  ..+++|+++..|.      +.|
T Consensus        73 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~-v~g~~~--~~~~~E~~~~~p~------~~Y  140 (310)
T 1eq2_A           73 FHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAA-TYGGRT--SDFIESREYEKPL------NVY  140 (310)
T ss_dssp             EECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGG-GGTTCC--SCBCSSGGGCCCS------SHH
T ss_pred             EECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHH-HhCCCC--CCCCCCCCCCCCC------Chh
Confidence            999997654  3456788999999999999999999998 999999984 554433  2477887765554      489


Q ss_pred             hHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHHHHHcCCCCc-c--CcC-CCCceeHHHHHHH
Q 020110          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDT-Q--EYH-WLGAVPVKDVAKA  237 (331)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~-~~~~v~v~D~a~a  237 (331)
                      +.+|..+|.+++.++++.+++++++||+++|||.....   ...+..++..+..+.++. .  +++ .++|+|++|+|++
T Consensus       141 ~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~  220 (310)
T 1eq2_A          141 GYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADV  220 (310)
T ss_dssp             HHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHH
Confidence            99999999999998878899999999999999986421   234556677777777654 3  346 8999999999999


Q ss_pred             HHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCC---CCCccccccchHHHHhhCC-Cc-cCHHHHH
Q 020110          238 QVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGET---QPGLIPCKDAAKRLMDLGL-VF-TPVEDAV  311 (331)
Q Consensus       238 ~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~k~~~lG~-~~-~~~~~~l  311 (331)
                      ++.++..+. .++|+++ ++++|+.|+++.+.+.++..++.......   .........|++|+++||| .| ++++++|
T Consensus       221 ~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~l~~~l  299 (310)
T 1eq2_A          221 NLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGV  299 (310)
T ss_dssp             HHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHH
T ss_pred             HHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhhcccccccccchHHHHhcCCCCCCCCHHHHH
Confidence            999998776 6688775 56799999999999998533122111111   0123346778999977999 67 6999999


Q ss_pred             HHHHHHHHHc
Q 020110          312 RETVESLKAK  321 (331)
Q Consensus       312 ~~~~~~~~~~  321 (331)
                      +++++|++++
T Consensus       300 ~~~~~~~~~~  309 (310)
T 1eq2_A          300 TEYMAWLNRD  309 (310)
T ss_dssp             HHHHHHTC--
T ss_pred             HHHHHHHHhc
Confidence            9999999653

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=3.3e-41  Score=302.06  Aligned_cols=300  Identities=15%  Similarity=0.086  Sum_probs=225.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhhcCCCC---CCC-cEEEEEccCCCchHHHHHhcC--c
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGA---GDA-NLRVFEADVLDSGAVSRAVEG--C   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~---~~~-~~~~~~~Dl~~~~~~~~~~~~--~   81 (331)
                      |+|||||||||||++|+++|+++|+ +|++++|+....  ..+..+...   .+. +++++.+|++|.+++.+++++  +
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence            6899999999999999999999999 999999976541  112211110   011 588999999999999998875  6


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-----EEEEeCccceeccCCCCCCccccCCCCCChhh
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-----RVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (331)
                      |+|||+|+.........++...+++|+.++.+++++|++.+++     +|||+||. .+|+...   .+++|+++..|. 
T Consensus       108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~-~vyg~~~---~~~~E~~~~~~~-  182 (381)
T 1n7h_A          108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS-EMFGSTP---PPQSETTPFHPR-  182 (381)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG-GGGTTSC---SSBCTTSCCCCC-
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcH-HHhCCCC---CCCCCCCCCCCC-
Confidence            9999999975432222346778999999999999999887765     99999997 4454433   278888776554 


Q ss_pred             hhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCCc--c--CcCCCCcee
Q 020110          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVP  230 (331)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~v~  230 (331)
                           +.|+.+|..+|.+++.++.+++++++++|++++|||+.....  ..+..++..+..|....  .  ++..++|+|
T Consensus       183 -----~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~  257 (381)
T 1n7h_A          183 -----SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF  257 (381)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred             -----CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEE
Confidence                 489999999999999998888999999999999999864322  11234455556665332  3  357899999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCC---CCCCCC-CCCCCccccccchHHH-HhhCCCc
Q 020110          231 VKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFP---VHRFDG-ETQPGLIPCKDAAKRL-MDLGLVF  304 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~k~-~~lG~~~  304 (331)
                      ++|+|++++.++..+. .++|+++ ++.+|+.|+++.+.+.++...   +..... ..........+|++|+ +.|||+|
T Consensus       258 v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  336 (381)
T 1n7h_A          258 AGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKP  336 (381)
T ss_dssp             HHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcCCcc
Confidence            9999999999998764 4778665 567999999999999995321   111000 0112233456799999 7799999


Q ss_pred             -cCHHHHHHHHHHHHHHc
Q 020110          305 -TPVEDAVRETVESLKAK  321 (331)
Q Consensus       305 -~~~~~~l~~~~~~~~~~  321 (331)
                       ++++++|+++++|++++
T Consensus       337 ~~~l~e~l~~~~~~~~~~  354 (381)
T 1n7h_A          337 QVGFEKLVKMMVDEDLEL  354 (381)
T ss_dssp             CSCHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHhh
Confidence             69999999999999764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=4.2e-42  Score=297.86  Aligned_cols=278  Identities=14%  Similarity=0.107  Sum_probs=219.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vih~   87 (331)
                      |+|||||||||||++++++|+ +|+ +|++++|+..                 ++.+|+.|++++.+++++  +|+|||+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~-~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~~~d~vih~   61 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVG-NLIALDVHSK-----------------EFCGDFSNPKGVAETVRKLRPDVIVNA   61 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTS-EEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCC-eEEEeccccc-----------------cccccCCCHHHHHHHHHhcCCCEEEEC
Confidence            489999999999999999999 899 9999988752                 246999999999999886  9999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |+.........++...+++|+.++.+++++|++.++ +|||+||.+ +|+...  ..+++|+++..|.      +.|+.+
T Consensus        62 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~-vy~~~~--~~~~~E~~~~~p~------~~Y~~s  131 (299)
T 1n2s_A           62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDY-VFPGTG--DIPWQETDATSPL------NVYGKT  131 (299)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGG-GSCCCT--TCCBCTTSCCCCS------SHHHHH
T ss_pred             cccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEeccc-EEeCCC--CCCCCCCCCCCCc------cHHHHH
Confidence            997553223456788999999999999999999887 899999984 454433  2578898876654      489999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHhhcCC-
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESP-  245 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~~~-  245 (331)
                      |..+|++++.++    .+++++||+++|||+..   .....++..+..+.++. .+++.++|+|++|+|++++.++..+ 
T Consensus       132 K~~~E~~~~~~~----~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  204 (299)
T 1n2s_A          132 KLAGEKALQDNC----PKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVAL  204 (299)
T ss_dssp             HHHHHHHHHHHC----SSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC----CCeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhc
Confidence            999999998653    48999999999999753   34556667777776655 5678899999999999999999865 


Q ss_pred             -CC--CceEEEe-ccccCHHHHHHHHHHhCCCCC----CC---CCCC----CCCCCccccccchHHH-HhhCCCccCHHH
Q 020110          246 -AA--SGRYLCT-NGIYQFGDFAERVSKLFPEFP----VH---RFDG----ETQPGLIPCKDAAKRL-MDLGLVFTPVED  309 (331)
Q Consensus       246 -~~--~g~~~~~-~~~~s~~e~~~~i~~~~~~~~----~~---~~~~----~~~~~~~~~~~~~~k~-~~lG~~~~~~~~  309 (331)
                       ..  +++|+++ ++.+|+.|+++.+.+.++...    .+   ....    ..........+|++|+ +.|||+|+++++
T Consensus       205 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~  284 (299)
T 1n2s_A          205 NKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWEL  284 (299)
T ss_dssp             HCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBHHH
T ss_pred             cccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCCCHHH
Confidence             22  5588765 467999999999998874211    01   0000    0112234567899999 779999999999


Q ss_pred             HHHHHHHHHHHcCC
Q 020110          310 AVRETVESLKAKGF  323 (331)
Q Consensus       310 ~l~~~~~~~~~~~~  323 (331)
                      +|+++++|++++..
T Consensus       285 ~l~~~~~~~~~~~~  298 (299)
T 1n2s_A          285 GVKRMLTEMFTTTT  298 (299)
T ss_dssp             HHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHHhcCC
Confidence            99999999987764

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=1.4e-40  Score=317.33  Aligned_cols=307  Identities=18%  Similarity=0.259  Sum_probs=233.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchH-HHHHhcCccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA-VSRAVEGCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~vi   85 (331)
                      +||+|||||||||||++|+++|+++ |+ +|++++|+......+..    .. +++++.+|++|.++ +.++++++|+||
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~-~V~~~~r~~~~~~~~~~----~~-~v~~v~~Dl~d~~~~~~~~~~~~D~Vi  387 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLN----HP-HFHFVEGDISIHSEWIEYHVKKCDVVL  387 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSE-EEEEEESCCTTTGGGTT----CT-TEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCC-EEEEEEcCchhhhhhcc----CC-ceEEEECCCCCcHHHHHHhhcCCCEEE
Confidence            4679999999999999999999998 89 99999998655433211    11 78999999999875 777888999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhh-hccCcch
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC-KSRKKWY  164 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~y  164 (331)
                      |+|+.........++...+++|+.++.+++++|++.+ ++|||+||.+ +|+...  ..+++|+++..+..+ ..+.+.|
T Consensus       388 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~-vyg~~~--~~~~~E~~~~~~~~p~~~p~~~Y  463 (660)
T 1z7e_A          388 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSE-VYGMCS--DKYFDEDHSNLIVGPVNKPRWIY  463 (660)
T ss_dssp             ECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGG-GGBTCC--SSSBCTTTCCEEECCTTCTTHHH
T ss_pred             ECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHH-HcCCCC--CcccCCCccccccCcccCCCCCc
Confidence            9999765322234567789999999999999999988 9999999974 454433  256888875321110 1223479


Q ss_pred             hHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCC-------CCChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHH
Q 020110          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-------YLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDV  234 (331)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~  234 (331)
                      +.+|..+|.+++.++++.+++++++||+++|||....       ....+..++.++..+.++. .  +++.++|+|++|+
T Consensus       464 ~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv  543 (660)
T 1z7e_A          464 SVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG  543 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHH
Confidence            9999999999999988889999999999999998642       1234556777777887654 2  4578999999999


Q ss_pred             HHHHHHhhcCCC--CCc-eEEEec-c-ccCHHHHHHHHHHhCCCCC----CCCCCC-----------CCCCCccccccch
Q 020110          235 AKAQVLLFESPA--ASG-RYLCTN-G-IYQFGDFAERVSKLFPEFP----VHRFDG-----------ETQPGLIPCKDAA  294 (331)
Q Consensus       235 a~a~~~~l~~~~--~~g-~~~~~~-~-~~s~~e~~~~i~~~~~~~~----~~~~~~-----------~~~~~~~~~~~~~  294 (331)
                      |++++.++..+.  ..| +|++++ + ++|+.|+++.+.+.++...    ++.+..           ...........|+
T Consensus       544 a~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~  623 (660)
T 1z7e_A          544 IEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSI  623 (660)
T ss_dssp             HHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCC
T ss_pred             HHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhcccCH
Confidence            999999998764  234 787765 3 6999999999998874221    111100           0001234567899


Q ss_pred             HHH-HhhCCCc-cCHHHHHHHHHHHHHHcCCC
Q 020110          295 KRL-MDLGLVF-TPVEDAVRETVESLKAKGFL  324 (331)
Q Consensus       295 ~k~-~~lG~~~-~~~~~~l~~~~~~~~~~~~~  324 (331)
                      +|+ +.|||+| ++++++|+++++|++++..+
T Consensus       624 ~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~~  655 (660)
T 1z7e_A          624 RNAHRCLDWEPKIDMQETIDETLDFFLRTVDL  655 (660)
T ss_dssp             HHHHHHHCCCCCCCHHHHHHHHHHHHHTTSCC
T ss_pred             HHHHHhcCCCccCcHHHHHHHHHHHHHhhccc
Confidence            999 7799999 69999999999999988754

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-41  Score=292.87  Aligned_cols=270  Identities=16%  Similarity=0.123  Sum_probs=213.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      -++|||||||||||++|+++|+++|+ +|++++|+                     .+|++|++++.++++  ++|+|||
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~~~d~vih   69 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNV-EVIPTDVQ---------------------DLDITNVLAVNKFFNEKKPNVVIN   69 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT---------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCC-eEEeccCc---------------------cCCCCCHHHHHHHHHhcCCCEEEE
Confidence            46999999999999999999999999 99999875                     279999999999998  7999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +|+.........++...+++|+.++.+++++|++.++ +|||+||.+ +|+...  ..+++|+++..|.      +.|+.
T Consensus        70 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~-v~~~~~--~~~~~E~~~~~~~------~~Y~~  139 (292)
T 1vl0_A           70 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDY-VFDGEA--KEPITEFDEVNPQ------SAYGK  139 (292)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGG-GSCSCC--SSCBCTTSCCCCC------SHHHH
T ss_pred             CCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHH-eECCCC--CCCCCCCCCCCCc------cHHHH
Confidence            9997543222245678899999999999999999887 999999984 444333  2578898876654      48999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      +|..+|.+++.+    ..+++++||+.+||| . .  .....++..+..+.++. .+++.++++|++|+|++++.++..+
T Consensus       140 sK~~~E~~~~~~----~~~~~~lR~~~v~G~-~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  211 (292)
T 1vl0_A          140 TKLEGENFVKAL----NPKYYIVRTAWLYGD-G-N--NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK  211 (292)
T ss_dssp             HHHHHHHHHHHH----CSSEEEEEECSEESS-S-S--CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhh----CCCeEEEeeeeeeCC-C-c--ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC
Confidence            999999999865    357999999999999 3 2  34455566666666554 5667899999999999999999876


Q ss_pred             CCCceEEEe-ccccCHHHHHHHHHHhCCCCC----CCCCCCC-CCCCccccccchHHH-HhhCCCccCHHHHHHHHHHHH
Q 020110          246 AASGRYLCT-NGIYQFGDFAERVSKLFPEFP----VHRFDGE-TQPGLIPCKDAAKRL-MDLGLVFTPVEDAVRETVESL  318 (331)
Q Consensus       246 ~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~k~-~~lG~~~~~~~~~l~~~~~~~  318 (331)
                       .+++|+++ ++.+|+.|+++.+.+.++...    ++..... .........+|++|+ +.|||+|++++++|+++++|+
T Consensus       212 -~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~  290 (292)
T 1vl0_A          212 -NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLL  290 (292)
T ss_dssp             -CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHH
T ss_pred             -CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCCCHHHHHHHHHHHh
Confidence             55678765 567999999999999984321    1111111 112234567899999 679999999999999999998


Q ss_pred             H
Q 020110          319 K  319 (331)
Q Consensus       319 ~  319 (331)
                      +
T Consensus       291 ~  291 (292)
T 1vl0_A          291 Q  291 (292)
T ss_dssp             T
T ss_pred             c
Confidence            6

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=5.1e-41  Score=293.19  Aligned_cols=284  Identities=18%  Similarity=0.160  Sum_probs=191.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vih   86 (331)
                      +|+|||||||||||++|+++|+++|+ +|++++|+...           . +  ++.+|++|++++.+++++  +|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~~~d~vih   66 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDFQPHVIVH   66 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC--------------------------------CHHHHHHHCCSEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhhCCCEEEE
Confidence            36899999999999999999999999 99999986532           0 3  678999999998888875  899999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +|+......+..++...+++|+.++.+++++|++.++ +|||+||.++ |+..   ..+++|+++..|.      +.|+.
T Consensus        67 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v-~~~~---~~~~~E~~~~~~~------~~Y~~  135 (315)
T 2ydy_A           67 CAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYV-FDGT---NPPYREEDIPAPL------NLYGK  135 (315)
T ss_dssp             CC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGG-SCSS---SCSBCTTSCCCCC------SHHHH
T ss_pred             CCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHH-cCCC---CCCCCCCCCCCCc------CHHHH
Confidence            9997655444556788999999999999999998886 9999999855 4432   3678898876654      48999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHH-cCCCCc-cCcCCCCceeHHHHHHHHHHhhcC
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLL-QGSKDT-QEYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      +|..+|.+++.+    +++++++||+.+||+...........++..+. .+..+. .+++.++++|++|+|++++.++..
T Consensus       136 sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  211 (315)
T 2ydy_A          136 TKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEK  211 (315)
T ss_dssp             HHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHh
Confidence            999999999854    57889999999999986521122333445555 565544 466789999999999999998875


Q ss_pred             C----CCCceEEEe-ccccCHHHHHHHHHHhCCCCCC---CCCC-CC-CCCCccccccchHHHHhhCCCc-cCHHHHHHH
Q 020110          245 P----AASGRYLCT-NGIYQFGDFAERVSKLFPEFPV---HRFD-GE-TQPGLIPCKDAAKRLMDLGLVF-TPVEDAVRE  313 (331)
Q Consensus       245 ~----~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~---~~~~-~~-~~~~~~~~~~~~~k~~~lG~~~-~~~~~~l~~  313 (331)
                      .    ..+++|+++ ++++|+.|+++.+.+.++....   +... .. .........+|++|++.+||+| ++++++|++
T Consensus       212 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~  291 (315)
T 2ydy_A          212 RMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKE  291 (315)
T ss_dssp             HHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTCCCCCCHHHHHHH
T ss_pred             hccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhcCCCCCCCHHHHHHH
Confidence            3    345578665 5679999999999999953211   1110 00 1122345678999994449988 699999999


Q ss_pred             HHHHHHHcC
Q 020110          314 TVESLKAKG  322 (331)
Q Consensus       314 ~~~~~~~~~  322 (331)
                      +++|++++.
T Consensus       292 ~~~~~~~~~  300 (315)
T 2ydy_A          292 SLWPFLIDK  300 (315)
T ss_dssp             HHGGGCC--
T ss_pred             HHHHHccch
Confidence            999998764

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=3.8e-40  Score=283.74  Aligned_cols=262  Identities=15%  Similarity=0.096  Sum_probs=204.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      ||+|||||| ||||++|+++|+++|+ +|++++|++.....+...      +++++.+|+.|.+     ++++|+|||+|
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------~~~~~~~D~~d~~-----~~~~d~vi~~a   71 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRAS------GAEPLLWPGEEPS-----LDGVTHLLIST   71 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHT------TEEEEESSSSCCC-----CTTCCEEEECC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhC------CCeEEEecccccc-----cCCCCEEEECC
Confidence            579999998 9999999999999999 999999987665544432      8999999999855     78899999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHh--CCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKR--FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +.....    .         ..+.++++++++  .++++|||+||. .+|+...  ..+++|+++..|.      +.|+.
T Consensus        72 ~~~~~~----~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~-~vyg~~~--~~~~~E~~~~~p~------~~Y~~  129 (286)
T 3ius_A           72 APDSGG----D---------PVLAALGDQIAARAAQFRWVGYLSTT-AVYGDHD--GAWVDETTPLTPT------AARGR  129 (286)
T ss_dssp             CCBTTB----C---------HHHHHHHHHHHHTGGGCSEEEEEEEG-GGGCCCT--TCEECTTSCCCCC------SHHHH
T ss_pred             Cccccc----c---------HHHHHHHHHHHhhcCCceEEEEeecc-eecCCCC--CCCcCCCCCCCCC------CHHHH
Confidence            965431    1         125689999988  688999999997 5565443  3688999887765      48999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc--cCcCCCCceeHHHHHHHHHHhhcC
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      +|..+|++++.+   .+++++++||+++||++....        .++..|....  .+++.++|+|++|+|++++.++.+
T Consensus       130 sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  198 (286)
T 3ius_A          130 WRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPF--------SKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMAR  198 (286)
T ss_dssp             HHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSS--------TTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhh---cCCCEEEEeccceECCCchHH--------HHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhC
Confidence            999999999855   589999999999999986431        1233455444  334789999999999999999998


Q ss_pred             CCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCC-CCCCC--C------CCccccccchHHH-HhhCCCc-c-CHHHHH
Q 020110          245 PAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHR-FDGET--Q------PGLIPCKDAAKRL-MDLGLVF-T-PVEDAV  311 (331)
Q Consensus       245 ~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~-~~~~~--~------~~~~~~~~~~~k~-~~lG~~~-~-~~~~~l  311 (331)
                      +..+++|+++ ++++|+.|+++.+.+.++. +.+. .....  .      .......+|++|+ +.|||+| . +++++|
T Consensus       199 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l  277 (286)
T 3ius_A          199 PDPGAVYNVCDDEPVPPQDVIAYAAELQGL-PLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGL  277 (286)
T ss_dssp             CCTTCEEEECCSCCBCHHHHHHHHHHHHTC-CCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHH
T ss_pred             CCCCCEEEEeCCCCccHHHHHHHHHHHcCC-CCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHH
Confidence            8765688765 5679999999999999843 3221 11111  0      1125677899999 6699999 4 799999


Q ss_pred             HHHHHH
Q 020110          312 RETVES  317 (331)
Q Consensus       312 ~~~~~~  317 (331)
                      +++++.
T Consensus       278 ~~~~~~  283 (286)
T 3ius_A          278 EALQAD  283 (286)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            999864

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.9e-40  Score=292.83  Aligned_cols=295  Identities=17%  Similarity=0.107  Sum_probs=224.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-------CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN-------YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g-------~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      ++|+||||||+||||++|+++|+++|       + +|++++|+.......     ... +++++.+|++|++++.++++ 
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~-~V~~~~r~~~~~~~~-----~~~-~~~~~~~Dl~d~~~~~~~~~~   85 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVE-KFTLIDVFQPEAPAG-----FSG-AVDARAADLSAPGEAEKLVEA   85 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEE-EEEEEESSCCCCCTT-----CCS-EEEEEECCTTSTTHHHHHHHT
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCc-eEEEEEccCCccccc-----cCC-ceeEEEcCCCCHHHHHHHHhc
Confidence            45799999999999999999999999       8 999999976432210     111 78999999999999999884 


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-----CCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-----VRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      ++|+|||+|+.... ...+++...+++|+.++.+++++|++.+     +++|||+||. .+|+...  ..+++|+++..|
T Consensus        86 ~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~-~~~~~~~--~~~~~E~~~~~~  161 (342)
T 2hrz_A           86 RPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSI-AVFGAPL--PYPIPDEFHTTP  161 (342)
T ss_dssp             CCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG-GGCCSSC--CSSBCTTCCCCC
T ss_pred             CCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCch-HhhCCCC--CCCcCCCCCCCC
Confidence            89999999997542 1123467789999999999999998876     7899999998 4554432  257889887665


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccC-CCCCCC--CChhHHHHHHHHcCCCCc--c-CcCCCCc
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLG-PLMQPY--LNASCAVLQQLLQGSKDT--Q-EYHWLGA  228 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G-~~~~~~--~~~~~~~~~~~~~~~~~~--~-~~~~~~~  228 (331)
                      .      +.|+.+|..+|.+++.++++.+++.+++|++.+|| |+....  ...+..++.....+.+..  . ++...++
T Consensus       162 ~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (342)
T 2hrz_A          162 L------TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWH  235 (342)
T ss_dssp             S------SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEE
T ss_pred             c------chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceee
Confidence            4      48999999999999999888889999999999998 664221  123455566677776543  2 2355678


Q ss_pred             eeHHHHHHHHHHhhcCCC----CCceEEEeccccCHHHHHHHHHHhCCCCC--CCCCCCCCC----CCccccccchHHHH
Q 020110          229 VPVKDVAKAQVLLFESPA----ASGRYLCTNGIYQFGDFAERVSKLFPEFP--VHRFDGETQ----PGLIPCKDAAKRLM  298 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~----~~g~~~~~~~~~s~~e~~~~i~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~k~~  298 (331)
                      +|++|+|++++.++..+.    ..++|+++++.+|+.|+++.+.+.++...  .........    .......+|++|++
T Consensus       236 ~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  315 (342)
T 2hrz_A          236 ASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRAR  315 (342)
T ss_dssp             ECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHHHH
T ss_pred             EehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChHHHH
Confidence            999999999999998763    34578887777999999999999884321  111111100    01112357999994


Q ss_pred             hhCCCc-cCHHHHHHHHHHHHH
Q 020110          299 DLGLVF-TPVEDAVRETVESLK  319 (331)
Q Consensus       299 ~lG~~~-~~~~~~l~~~~~~~~  319 (331)
                      .|||+| .+++++|+++++|++
T Consensus       316 ~lG~~p~~~l~e~l~~~~~~~~  337 (342)
T 2hrz_A          316 ELGFTAESSFEEIIQVHIEDEL  337 (342)
T ss_dssp             HTTCCCCSSHHHHHHHHHHHHS
T ss_pred             HcCCCCCCCHHHHHHHHHHHhc
Confidence            499999 699999999999997

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=5.3e-39  Score=285.98  Aligned_cols=293  Identities=14%  Similarity=0.115  Sum_probs=221.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-----CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC---c
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN-----YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---C   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g-----~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~   81 (331)
                      |+|||||||||||++|+++|+++|     + +|++++|++.... ..     .. +++++.+|++|++++.+++++   +
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~-~V~~~~r~~~~~~-~~-----~~-~~~~~~~Dl~d~~~~~~~~~~~~~~   73 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPW-KVYGVARRTRPAW-HE-----DN-PINYVQCDISDPDDSQAKLSPLTDV   73 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSE-EEEEEESSCCCSC-CC-----SS-CCEEEECCTTSHHHHHHHHTTCTTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCce-EEEEEeCCCCccc-cc-----cC-ceEEEEeecCCHHHHHHHHhcCCCC
Confidence            589999999999999999999999     9 9999999865533 11     11 788999999999999999988   9


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEE-------EeCccceeccCCCCCCccccCCCCC
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVV-------VTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v-------~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      |+|||+|+...     .++...+++|+.++.+++++|++.  ++++||       |+||. .+|+.......+++|+++.
T Consensus        74 d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~-~vyg~~~~~~~~~~E~~~~  147 (364)
T 2v6g_A           74 THVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPF-ESYGKIESHDPPYTEDLPR  147 (364)
T ss_dssp             CEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCG-GGTTTSCCCCSSBCTTSCC
T ss_pred             CEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEech-hhccccccCCCCCCccccC
Confidence            99999999753     347889999999999999999998  899998       78987 4555432223678888766


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHcC-CeEEEEcCCcccCCCCCCCCCh-hHH-HHHHH--HcCCCCc-cCc---
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG-VDVVAIHPATCLGPLMQPYLNA-SCA-VLQQL--LQGSKDT-QEY---  223 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~-~~~~~lR~~~v~G~~~~~~~~~-~~~-~~~~~--~~~~~~~-~~~---  223 (331)
                      .|.     .+.|    ..+|++++.++++++ ++++++||+++|||+....... ... ++..+  ..|.++. .++   
T Consensus       148 ~~~-----~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~  218 (364)
T 2v6g_A          148 LKY-----MNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAA  218 (364)
T ss_dssp             CSS-----CCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHH
T ss_pred             Ccc-----chhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCccc
Confidence            542     1367    357888888876676 9999999999999987543222 222 23333  2566554 332   


Q ss_pred             --CCCCceeHHHHHHHHHHhhcCCCCCc-eEEEec-cccCHHHHHHHHHHhCCCCC------CCCCC-------------
Q 020110          224 --HWLGAVPVKDVAKAQVLLFESPAASG-RYLCTN-GIYQFGDFAERVSKLFPEFP------VHRFD-------------  280 (331)
Q Consensus       224 --~~~~~v~v~D~a~a~~~~l~~~~~~g-~~~~~~-~~~s~~e~~~~i~~~~~~~~------~~~~~-------------  280 (331)
                        ...+++|++|+|++++.+++++...| +|++++ +++|+.|+++.+.+.++...      +|.+.             
T Consensus       219 ~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~  298 (364)
T 2v6g_A          219 WDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEE  298 (364)
T ss_dssp             HHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHH
T ss_pred             ccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHH
Confidence              45788999999999999998775455 787755 56999999999999984321      11110             


Q ss_pred             ----CC-CCC---Cc-----------cc-cccchHHHHhhCCCc-cCHHHHHHHHHHHHHHcCCCC
Q 020110          281 ----GE-TQP---GL-----------IP-CKDAAKRLMDLGLVF-TPVEDAVRETVESLKAKGFLG  325 (331)
Q Consensus       281 ----~~-~~~---~~-----------~~-~~~~~~k~~~lG~~~-~~~~~~l~~~~~~~~~~~~~~  325 (331)
                          .. ...   ..           .. ..+|++|+++|||+| ++++++|+++++|+++++.++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~lp  364 (364)
T 2v6g_A          299 IVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP  364 (364)
T ss_dssp             HHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred             HHHHhCCCccccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence                00 000   00           33 578999994499998 799999999999999998764

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=2.8e-39  Score=310.56  Aligned_cols=308  Identities=15%  Similarity=0.128  Sum_probs=223.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch-hhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKG   83 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   83 (331)
                      .++|+|||||||||||++|+++|+++|+ +|++++|+...... ...+......+++++.+|+++++++.++++  ++|+
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~   87 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS   87 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence            3467999999999999999999999999 99999987543211 111000000167889999999999999988  7999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC--CCccccCCCCCChhhhhccC
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLEYCKSRK  161 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~--~~~~~~E~~~~~~~~~~~~~  161 (331)
                      |||+|+..........+...+++|+.++.+++++|++.++++|||+||.+ +|+....  ...+++|+++..|.      
T Consensus        88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~-vyg~~~~~~~~~~~~E~~~~~p~------  160 (699)
T 1z45_A           88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSAT-VYGDATRFPNMIPIPEECPLGPT------  160 (699)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCCGGGSTTCCSBCTTSCCCCC------
T ss_pred             EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHH-HhCCCccccccCCccccCCCCCC------
Confidence            99999975432122335678999999999999999998999999999974 4543221  12467787765554      


Q ss_pred             cchhHHHHHHHHHHHHHHHH--cCCeEEEEcCCcccCCCCCC----C----CChhHHHHHHHHcC--CCCc-c-------
Q 020110          162 KWYPVSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQP----Y----LNASCAVLQQLLQG--SKDT-Q-------  221 (331)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~----~----~~~~~~~~~~~~~~--~~~~-~-------  221 (331)
                      +.|+.+|..+|.+++.++++  .+++++++||+++||+....    .    ...+...+.+...+  .++. +       
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  240 (699)
T 1z45_A          161 NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSR  240 (699)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------C
T ss_pred             ChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCC
Confidence            48999999999999998876  79999999999999986321    0    11222344444433  2332 2       


Q ss_pred             -CcCCCCceeHHHHHHHHHHhhcCC------CC-CceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCC-CCCCccccc
Q 020110          222 -EYHWLGAVPVKDVAKAQVLLFESP------AA-SGRYLC-TNGIYQFGDFAERVSKLFPEFPVHRFDGE-TQPGLIPCK  291 (331)
Q Consensus       222 -~~~~~~~v~v~D~a~a~~~~l~~~------~~-~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~  291 (331)
                       +++.++|||++|+|++++.++...      .. .++|++ +++.+|+.|+++.+++.++ .+++..... .........
T Consensus       241 ~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g-~~~~~~~~~~~~~~~~~~~  319 (699)
T 1z45_A          241 DGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASG-IDLPYKVTGRRAGDVLNLT  319 (699)
T ss_dssp             CSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHT-CCCCC---------CCCCC
T ss_pred             CCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhC-CCCCceecCCCCCcccccc
Confidence             346799999999999999888642      12 247876 4567999999999999984 333322111 112334577


Q ss_pred             cchHHH-HhhCCCc-cCHHHHHHHHHHHHHHcCC
Q 020110          292 DAAKRL-MDLGLVF-TPVEDAVRETVESLKAKGF  323 (331)
Q Consensus       292 ~~~~k~-~~lG~~~-~~~~~~l~~~~~~~~~~~~  323 (331)
                      +|++|+ +.|||+| ++++++|+++++|++++..
T Consensus       320 ~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~  353 (699)
T 1z45_A          320 AKPDRAKRELKWQTELQVEDSCKDLWKWTTENPF  353 (699)
T ss_dssp             BCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             CCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCc
Confidence            899999 7899999 6999999999999998764

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.1e-38  Score=272.65  Aligned_cols=271  Identities=17%  Similarity=0.114  Sum_probs=198.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |||||||||||||++|+++|+++|| +|++++|++...            .   +..|    +.....++++|+|||+|+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~-~V~~l~R~~~~~------------~---~~~~----~~~~~~l~~~d~vihla~   60 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGH-EVTLVSRKPGPG------------R---ITWD----ELAASGLPSCDAAVNLAG   60 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTT------------E---EEHH----HHHHHCCCSCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCcC------------e---eecc----hhhHhhccCCCEEEEecc
Confidence            5899999999999999999999999 999999976431            1   2222    223355788999999998


Q ss_pred             CCCCCC---C-CCchhhhhHHHHHHHHHHHHHHHhCCCC--EEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcc
Q 020110           90 PCTLED---P-VDPEKELILPAVQGTLNVLEAAKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (331)
Q Consensus        90 ~~~~~~---~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (331)
                      ......   + .......++.|+.++.+|+++++..+.+  +||+.||+ .+|+....  .+.+|+++..+..      .
T Consensus        61 ~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~-~vyg~~~~--~~~~E~~p~~~~~------~  131 (298)
T 4b4o_A           61 ENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGV-AYYQPSLT--AEYDEDSPGGDFD------F  131 (298)
T ss_dssp             CCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEG-GGSCCCSS--CCBCTTCCCSCSS------H
T ss_pred             CcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeee-eeecCCCC--CcccccCCccccc------h
Confidence            543321   1 1223567889999999999999888654  58888876 55655443  6788888766543      6


Q ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc--cCcCCCCceeHHHHHHHHHHh
Q 020110          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDVAKAQVLL  241 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~v~D~a~a~~~~  241 (331)
                      |+..+...|....  ....+++++++||+.||||+.    .....++.....+....  .+++.++|||++|+|+++..+
T Consensus       132 ~~~~~~~~e~~~~--~~~~~~~~~~~r~~~v~g~~~----~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~  205 (298)
T 4b4o_A          132 FSNLVTKWEAAAR--LPGDSTRQVVVRSGVVLGRGG----GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHA  205 (298)
T ss_dssp             HHHHHHHHHHHHC--CSSSSSEEEEEEECEEECTTS----HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHH--hhccCCceeeeeeeeEEcCCC----CchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHH
Confidence            7777777665432  235689999999999999974    23444444555555444  556899999999999999999


Q ss_pred             hcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCC---------CC--CCccccccchHHHHhhCCCcc--CH
Q 020110          242 FESPAASGRYLC-TNGIYQFGDFAERVSKLFPEFPVHRFDGE---------TQ--PGLIPCKDAAKRLMDLGLVFT--PV  307 (331)
Q Consensus       242 l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~---------~~--~~~~~~~~~~~k~~~lG~~~~--~~  307 (331)
                      ++++...|+||+ +++++|++|+++.+++.++ .+...+.+.         ..  ....+..++++|++++||+++  ++
T Consensus       206 ~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lg-rp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l  284 (298)
T 4b4o_A          206 LEANHVHGVLNGVAPSSATNAEFAQTFGAALG-RRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPEL  284 (298)
T ss_dssp             HHCTTCCEEEEESCSCCCBHHHHHHHHHHHHT-CCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSH
T ss_pred             HhCCCCCCeEEEECCCccCHHHHHHHHHHHhC-cCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCH
Confidence            999888889876 4577999999999999984 332211110         00  112345678899989999994  89


Q ss_pred             HHHHHHHHH
Q 020110          308 EDAVRETVE  316 (331)
Q Consensus       308 ~~~l~~~~~  316 (331)
                      +++|+++++
T Consensus       285 ~~al~~l~~  293 (298)
T 4b4o_A          285 GAALKEIAE  293 (298)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999887

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2.4e-36  Score=251.19  Aligned_cols=220  Identities=20%  Similarity=0.244  Sum_probs=172.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      ||+|||||||||||++++++|+++|+ +|++++|++.....+.      . +++++.+|++|++++.++++++|+|||+|
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~------~-~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a   75 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN------E-HLKVKKADVSSLDEVCEVCKGADAVISAF   75 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC------T-TEEEECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc------C-ceEEEEecCCCHHHHHHHhcCCCEEEEeC
Confidence            67999999999999999999999999 9999999865543321      1 89999999999999999999999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      +....      ....+++|+.++.++++++++.++++|||+||.+++++.++    ...|+++..|.      +.|+.+|
T Consensus        76 ~~~~~------~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~----~~~~~~~~~p~------~~Y~~sK  139 (227)
T 3dhn_A           76 NPGWN------NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG----LRLMDSGEVPE------NILPGVK  139 (227)
T ss_dssp             CC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT----EEGGGTTCSCG------GGHHHHH
T ss_pred             cCCCC------ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC----CccccCCcchH------HHHHHHH
Confidence            86421      23478999999999999999999999999999876665443    23344444444      3899999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHhhcCCCC
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESPAA  247 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~~~~~  247 (331)
                      ..+|.+++.++++.+++++++||+.+|||+.......         .+.... .....++|+|++|+|++++.+++++..
T Consensus       140 ~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~  210 (227)
T 3dhn_A          140 ALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR---------LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKH  210 (227)
T ss_dssp             HHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE---------EESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHHhhccCccEEEEeCCcccCCCcccccee---------ecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccc
Confidence            9999999888877899999999999999986543211         122222 222348999999999999999999887


Q ss_pred             Cc-eEEE-eccccCHH
Q 020110          248 SG-RYLC-TNGIYQFG  261 (331)
Q Consensus       248 ~g-~~~~-~~~~~s~~  261 (331)
                      .| +|++ ++++.++.
T Consensus       211 ~g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          211 HQERFTIGYLEHHHHH  226 (227)
T ss_dssp             CSEEEEEECCSCCC--
T ss_pred             cCcEEEEEeehhcccC
Confidence            66 7855 55666664

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=6.5e-37  Score=283.81  Aligned_cols=278  Identities=15%  Similarity=0.138  Sum_probs=201.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      ||+|||||||||||++|+++|+++|+ +|++++|+.....              .+.+|+.+.  +.+.++++|+|||+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~~~~~~--------------~v~~d~~~~--~~~~l~~~D~Vih~A  209 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRKEPKPG--------------KRFWDPLNP--ASDLLDGADVLVHLA  209 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSSCCTT--------------CEECCTTSC--CTTTTTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCCcc--------------ceeecccch--hHHhcCCCCEEEECC
Confidence            78999999999999999999999999 9999999865421              256787653  345678899999999


Q ss_pred             cCCCCCC-CCCchhhhhHHHHHHHHHHHHH-HHhCCCCEEEEeCccceecc-CCCCCCccccCCCCCChhhhhccCcchh
Q 020110           89 SPCTLED-PVDPEKELILPAVQGTLNVLEA-AKRFGVRRVVVTSSISAIVP-NPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        89 ~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~v~~SS~~~~~~-~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      +...... ....+...+++|+.++.+|+++ ++..++++|||+||+ .+|+ ...  ..+++|+++. +.      +.|+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~-~vyg~~~~--~~~~~E~~~~-~~------~~y~  279 (516)
T 3oh8_A          210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAV-GFYGHDRG--DEILTEESES-GD------DFLA  279 (516)
T ss_dssp             CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEG-GGGCSEEE--EEEECTTSCC-CS------SHHH
T ss_pred             CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcc-eEecCCCC--CCccCCCCCC-Cc------ChHH
Confidence            9765422 2344577899999999999999 677789999999997 4554 332  2678888765 22      4799


Q ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc--cCcCCCCceeHHHHHHHHHHhhc
Q 020110          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDVAKAQVLLFE  243 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~v~D~a~a~~~~l~  243 (331)
                      .+|...|..+.. ++..|++++++||+++|||+.    ..+..++..+..+....  .+++.++|||++|+|++++.++.
T Consensus       280 ~~~~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~  354 (516)
T 3oh8_A          280 EVCRDWEHATAP-ASDAGKRVAFIRTGVALSGRG----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIV  354 (516)
T ss_dssp             HHHHHHHHTTHH-HHHTTCEEEEEEECEEEBTTB----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-HHhCCCCEEEEEeeEEECCCC----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHh
Confidence            999999987654 447899999999999999973    23434444444443333  45578999999999999999999


Q ss_pred             CCCCCceEEE-eccccCHHHHHHHHHHhCCCCC---CCCCCCCCC--------CCccccccchHHHHhhCCCcc--CHHH
Q 020110          244 SPAASGRYLC-TNGIYQFGDFAERVSKLFPEFP---VHRFDGETQ--------PGLIPCKDAAKRLMDLGLVFT--PVED  309 (331)
Q Consensus       244 ~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~---~~~~~~~~~--------~~~~~~~~~~~k~~~lG~~~~--~~~~  309 (331)
                      ++...|+||+ +++.+|+.|+++.+++.++...   +|.+.....        .......++++|+++|||+|+  ++++
T Consensus       355 ~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e  434 (516)
T 3oh8_A          355 DAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGA  434 (516)
T ss_dssp             CTTCCEEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHH
T ss_pred             CcccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHH
Confidence            8877788865 5577999999999999884221   121111100        112345578899988999994  5999


Q ss_pred             HHHHHHHHH
Q 020110          310 AVRETVESL  318 (331)
Q Consensus       310 ~l~~~~~~~  318 (331)
                      +|++++++.
T Consensus       435 ~l~~~l~~~  443 (516)
T 3oh8_A          435 AIAHELGYE  443 (516)
T ss_dssp             HHHHHHTCC
T ss_pred             HHHHHhCcc
Confidence            999998753

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=3e-36  Score=273.71  Aligned_cols=301  Identities=17%  Similarity=0.125  Sum_probs=215.6

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC------------CCCCCcEEEEEccCCCchH
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP------------GAGDANLRVFEADVLDSGA   73 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~~~~Dl~~~~~   73 (331)
                      ...||+|||||||||||++|+++|++.|+ +|++++|+........++.            .....++.++.+|+++++.
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCC-EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            34578999999999999999999999999 9999999876221111000            0000179999999999887


Q ss_pred             HHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCC--CCCCccccCCCC
Q 020110           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNP--GWKGKVFDETSW  151 (331)
Q Consensus        74 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~--~~~~~~~~E~~~  151 (331)
                      +. .+.++|+|||+|+....   ..++...+++|+.++.+++++|.+ +.++|||+||.++ +...  .....+++|+++
T Consensus       145 l~-~~~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~  218 (427)
T 4f6c_A          145 VV-LPENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADV  218 (427)
T ss_dssp             CC-CSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCS
T ss_pred             CC-CcCCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccccc
Confidence            77 67789999999997653   345678899999999999999998 7899999999865 2211  113467888887


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC------ChhHHHHHHHHcCCCCcc--Cc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL------NASCAVLQQLLQGSKDTQ--EY  223 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~--~~  223 (331)
                      ..+.   .+.+.|+.+|..+|.+++.++ +.|++++++||++|||+......      ..+..++.....+..++.  ++
T Consensus       219 ~~~~---~~~~~Y~~sK~~~E~~~~~~~-~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (427)
T 4f6c_A          219 YKGQ---LLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAE  294 (427)
T ss_dssp             CSSC---CCCSHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHT
T ss_pred             ccCC---CCCCchHHHHHHHHHHHHHHH-HcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCcccc
Confidence            4322   134589999999999999876 57999999999999999865421      235566777777776663  57


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCC----------C--------
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFDGET----------Q--------  284 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~----------~--------  284 (331)
                      ..++|+|++|+|++++.++..+..+++|+++ ++++++.|+++.+.+ ++ .  +....+.          .        
T Consensus       295 ~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g-~--~~~~~~~~~~~l~~~~~~~~~~~~~~  370 (427)
T 4f6c_A          295 MPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE-I--ELVSDESFNEILQKQDMYETIGLTSV  370 (427)
T ss_dssp             CEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC-C--EEECHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             ceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC-C--cccCHHHHHHHHHhcCchhhhhhhhc
Confidence            8899999999999999999887745588765 567999999999998 43 1  1110000          0        


Q ss_pred             -CCccccccchHHH----HhhCCCcc-CHHHHHHHHHHHHHHc
Q 020110          285 -PGLIPCKDAAKRL----MDLGLVFT-PVEDAVRETVESLKAK  321 (331)
Q Consensus       285 -~~~~~~~~~~~k~----~~lG~~~~-~~~~~l~~~~~~~~~~  321 (331)
                       .......+|+++.    +.+||.+. .-++.++.+++|+++.
T Consensus       371 ~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~  413 (427)
T 4f6c_A          371 DREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI  413 (427)
T ss_dssp             HHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             cccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence             0112344555443    56799985 4455899999988764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=3.6e-36  Score=257.15  Aligned_cols=261  Identities=15%  Similarity=0.121  Sum_probs=200.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vih~   87 (331)
                      |+|||||||||||++++++|+ +|+ +|++++|++...          . +   +.+|++|++++.+++++  +|+|||+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~-~V~~~~r~~~~~----------~-~---~~~Dl~~~~~~~~~~~~~~~d~vi~~   64 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERH-EVIKVYNSSEIQ----------G-G---YKLDLTDFPRLEDFIIKKRPDVIINA   64 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTS-CEEEEESSSCCT----------T-C---EECCTTSHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCC-eEEEecCCCcCC----------C-C---ceeccCCHHHHHHHHHhcCCCEEEEC
Confidence            379999999999999999999 588 999999976421          1 4   78999999999998886  9999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |+.........++...+++|+.++.++++++++.+. +|||+||.+++ +...   .+++|+++..|.      +.|+.+
T Consensus        65 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~-~~~~---~~~~e~~~~~~~------~~Y~~s  133 (273)
T 2ggs_A           65 AAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVF-DGEK---GNYKEEDIPNPI------NYYGLS  133 (273)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGS-CSSS---CSBCTTSCCCCS------SHHHHH
T ss_pred             CcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeE-cCCC---CCcCCCCCCCCC------CHHHHH
Confidence            997543222245678899999999999999998886 89999998554 3222   368888776554      489999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      |..+|.+++.      ++++++||+.+||+.     .....++.....+.+.. .++ .++++|++|+|++++.++..+.
T Consensus       134 K~~~e~~~~~------~~~~~iR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~  201 (273)
T 2ggs_A          134 KLLGETFALQ------DDSLIIRTSGIFRNK-----GFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK  201 (273)
T ss_dssp             HHHHHHHHCC------TTCEEEEECCCBSSS-----SHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhC------CCeEEEecccccccc-----HHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc
Confidence            9999999853      788999999999831     23334445556666544 455 7899999999999999998764


Q ss_pred             CCceEEEeccccCHHHHHHHHHHhCCCCCCCCC----C-CCCCCCccccccchHHH-HhhCCCc-c-CHHHHH
Q 020110          247 ASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRF----D-GETQPGLIPCKDAAKRL-MDLGLVF-T-PVEDAV  311 (331)
Q Consensus       247 ~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~k~-~~lG~~~-~-~~~~~l  311 (331)
                       .|+|+++++.+|+.|+++.+.+.++. +.+..    . ...........+|++|+ +.|||+| . +++++|
T Consensus       202 -~g~~~i~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~  272 (273)
T 2ggs_A          202 -TGIIHVAGERISRFELALKIKEKFNL-PGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV  272 (273)
T ss_dssp             -CEEEECCCCCEEHHHHHHHHHHHTTC-CSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred             -CCeEEECCCcccHHHHHHHHHHHhCC-ChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence             56887766779999999999999943 22211    0 01112234578899999 6799999 3 888765

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=1.2e-35  Score=255.75  Aligned_cols=255  Identities=18%  Similarity=0.194  Sum_probs=194.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC--CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      |+|||||||||||++++++|+++  |+ +|++++|++.....+...      +++++.+|++|++++.++++++|+|||+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~------~~~~~~~D~~d~~~l~~~~~~~d~vi~~   73 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQ------GVEVRHGDYNQPESLQKAFAGVSKLLFI   73 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHT------TCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhc------CCeEEEeccCCHHHHHHHHhcCCEEEEc
Confidence            47999999999999999999999  99 999999987654443322      6889999999999999999999999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |+...     .   .  ++|+.++.+++++|++.++++|||+||.++ +..               +       ..|+.+
T Consensus        74 a~~~~-----~---~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~-~~~---------------~-------~~y~~~  120 (287)
T 2jl1_A           74 SGPHY-----D---N--TLLIVQHANVVKAARDAGVKHIAYTGYAFA-EES---------------I-------IPLAHV  120 (287)
T ss_dssp             CCCCS-----C---H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTG-GGC---------------C-------STHHHH
T ss_pred             CCCCc-----C---c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCC-CCC---------------C-------CchHHH
Confidence            98521     1   1  679999999999999999999999999744 210               0       279999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCC-ccCcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD-TQEYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      |..+|++++    +.+++++++||+.++|+...   ..+..   ....+... ..++..++|+|++|+|++++.++..+.
T Consensus       121 K~~~E~~~~----~~~~~~~ilrp~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  190 (287)
T 2jl1_A          121 HLATEYAIR----TTNIPYTFLRNALYTDFFVN---EGLRA---STESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG  190 (287)
T ss_dssp             HHHHHHHHH----HTTCCEEEEEECCBHHHHSS---GGGHH---HHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHH----HcCCCeEEEECCEeccccch---hhHHH---HhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC
Confidence            999999886    57999999999998886421   12211   12233322 246688999999999999999998765


Q ss_pred             CCc-eEEEec-cccCHHHHHHHHHHhCCCCCCCCCCCCCC---------CC----------------ccccccchHHH-H
Q 020110          247 ASG-RYLCTN-GIYQFGDFAERVSKLFPEFPVHRFDGETQ---------PG----------------LIPCKDAAKRL-M  298 (331)
Q Consensus       247 ~~g-~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~~~---------~~----------------~~~~~~~~~k~-~  298 (331)
                      ..| +|++++ +.+|+.|+++.+.+.++ .+++.......         ..                ......|++++ +
T Consensus       191 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (287)
T 2jl1_A          191 HENKTYNLVSNQPWTFDELAQILSEVSG-KKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQK  269 (287)
T ss_dssp             CTTEEEEECCSSCBCHHHHHHHHHHHHS-SCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHH
T ss_pred             CCCcEEEecCCCcCCHHHHHHHHHHHHC-CcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHH
Confidence            455 787765 57999999999999984 33322111100         00                02345678899 7


Q ss_pred             hhCCCccCHHHHHHHHHH
Q 020110          299 DLGLVFTPVEDAVRETVE  316 (331)
Q Consensus       299 ~lG~~~~~~~~~l~~~~~  316 (331)
                      .|| .+++++++|+++++
T Consensus       270 ~lG-~~~~l~e~l~~~~~  286 (287)
T 2jl1_A          270 LIG-SLTPLKETVKQALK  286 (287)
T ss_dssp             HHS-SCCCHHHHHHHHHT
T ss_pred             HhC-CCCCHHHHHHHHhc
Confidence            799 66899999999875

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.4e-35  Score=268.50  Aligned_cols=256  Identities=20%  Similarity=0.155  Sum_probs=192.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHC---CCCEEEEEecCCCccchhhc---CCCC------------CCCcEEEEEccC
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDN---NYTSINATVFPGSDSSHLFA---LPGA------------GDANLRVFEADV   68 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~---g~~~V~~~~r~~~~~~~~~~---~~~~------------~~~~~~~~~~Dl   68 (331)
                      .+||+|||||||||||++|+++|++.   |+ +|++++|+........+   ....            ...+++++.+|+
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~-~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDG-RLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTC-EEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCC-EEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            45789999999999999999999998   89 99999998654322111   1000            011899999999


Q ss_pred             C------CchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCC
Q 020110           69 L------DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWK  142 (331)
Q Consensus        69 ~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~  142 (331)
                      +      +.+.+.++++++|+|||+|+....    .++...+++|+.++.+++++|++.++++|||+||. .+|+.... 
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~-~v~~~~~~-  223 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTA-DVGAAIEP-  223 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEG-GGGTTSCT-
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeh-hhcCccCC-
Confidence            8      556888889999999999998764    44567899999999999999999999999999997 45554432 


Q ss_pred             CccccCCCCCChhhhh-----ccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC----CChhHHHHHHH
Q 020110          143 GKVFDETSWTDLEYCK-----SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY----LNASCAVLQQL  213 (331)
Q Consensus       143 ~~~~~E~~~~~~~~~~-----~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~----~~~~~~~~~~~  213 (331)
                       .+++|+++..|....     ...+.|+.+|..+|.+++.++++.+++++++||++|||+....+    ..++..++...
T Consensus       224 -~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~  302 (478)
T 4dqv_A          224 -SAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSL  302 (478)
T ss_dssp             -TTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHH
T ss_pred             -CCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHH
Confidence             678888766554310     01135999999999999999887899999999999999865221    22334444433


Q ss_pred             Hc-CCC-Ccc---------CcCCCCceeHHHHHHHHHHhhcC----CCC-CceEEEe-ccc--cCHHHHHHHHHHh
Q 020110          214 LQ-GSK-DTQ---------EYHWLGAVPVKDVAKAQVLLFES----PAA-SGRYLCT-NGI--YQFGDFAERVSKL  270 (331)
Q Consensus       214 ~~-~~~-~~~---------~~~~~~~v~v~D~a~a~~~~l~~----~~~-~g~~~~~-~~~--~s~~e~~~~i~~~  270 (331)
                      .. |.. ..+         ++..++|+|++|+|++++.++..    +.. .++|+++ ++.  +|+.|+++.+.+.
T Consensus       303 ~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~  378 (478)
T 4dqv_A          303 MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA  378 (478)
T ss_dssp             HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred             HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence            32 321 111         14678999999999999998875    333 3478765 455  8999999999985

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=1.9e-35  Score=260.45  Aligned_cols=235  Identities=15%  Similarity=0.114  Sum_probs=188.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ++|+|||||||||||++++++|++. |+.+|++++|++.....+..... .. +++++.+|++|.+++.++++++|+|||
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-~~-~v~~~~~Dl~d~~~l~~~~~~~D~Vih   97 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-DP-RMRFFIGDVRDLERLNYALEGVDICIH   97 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-CT-TEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-CC-CEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence            3579999999999999999999999 85489999997654333221111 11 799999999999999999999999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +||.........++...+++|+.++.+++++|.+.++++||++||..++.                       +.+.|+.
T Consensus        98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~-----------------------p~~~Y~~  154 (344)
T 2gn4_A           98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN-----------------------PINLYGA  154 (344)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS-----------------------CCSHHHH
T ss_pred             CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC-----------------------CccHHHH
Confidence            99976532223346789999999999999999999999999999964321                       1148999


Q ss_pred             HHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCC-CCc--cCcCCCCceeHHHHHHHHHH
Q 020110          167 SKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDT--QEYHWLGAVPVKDVAKAQVL  240 (331)
Q Consensus       167 sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~v~v~D~a~a~~~  240 (331)
                      +|..+|.+++.++++   .+++++++||+++||+..    ..+..++.++..|. ++.  .++..++|+|++|+|++++.
T Consensus       155 sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~  230 (344)
T 2gn4_A          155 TKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLK  230 (344)
T ss_dssp             HHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHH
Confidence            999999999987643   579999999999999863    34556677777777 554  34567899999999999999


Q ss_pred             hhcCCCCCceEEEeccccCHHHHHHHHHHhC
Q 020110          241 LFESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (331)
Q Consensus       241 ~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~  271 (331)
                      ++.....+.+|++++..+++.|+++.+.+.+
T Consensus       231 ~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          231 SLKRMHGGEIFVPKIPSMKMTDLAKALAPNT  261 (344)
T ss_dssp             HHHHCCSSCEEEECCCEEEHHHHHHHHCTTC
T ss_pred             HHhhccCCCEEecCCCcEEHHHHHHHHHHhC
Confidence            9987654447888777899999999998765

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=3.5e-35  Score=272.19  Aligned_cols=302  Identities=17%  Similarity=0.126  Sum_probs=216.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC------------CCCCCCcEEEEEccCCCchHHH
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL------------PGAGDANLRVFEADVLDSGAVS   75 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~------------~~~~~~~~~~~~~Dl~~~~~~~   75 (331)
                      .||+|||||||||||++|+++|++.|+ +|++++|+........++            ......+++++.+|+++++.+.
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEE-EEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCC-EEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            468999999999999999999988899 999999987632111100            0000118999999999987777


Q ss_pred             HHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCC--CCCCccccCCCCCC
Q 020110           76 RAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNP--GWKGKVFDETSWTD  153 (331)
Q Consensus        76 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~--~~~~~~~~E~~~~~  153 (331)
                       ...++|+|||+|+....   ..++...+++|+.++.+++++|++ +.++|||+||.++ +...  .....+++|+++..
T Consensus       228 -~~~~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~  301 (508)
T 4f6l_B          228 -LPENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK  301 (508)
T ss_dssp             -CSSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCS
T ss_pred             -CccCCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCcccccccccc
Confidence             67789999999997653   344677899999999999999998 7789999999865 2111  11346788888643


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC------ChhHHHHHHHHcCCCCcc--CcCC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL------NASCAVLQQLLQGSKDTQ--EYHW  225 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~  225 (331)
                      +.   .+.+.|+.+|..+|++++.++ +.|++++++||++|||+......      ..+..++.....+..++.  +++.
T Consensus       302 ~~---~~~~~Y~~sK~~~E~~~~~~~-~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~  377 (508)
T 4f6l_B          302 GQ---LLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMP  377 (508)
T ss_dssp             SB---CCCSHHHHHHHHHHHHHHHHH-HTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSE
T ss_pred             cc---cCCCcHHHHHHHHHHHHHHHH-HcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCce
Confidence            22   134689999999999999876 57999999999999999865421      234566677766665553  4688


Q ss_pred             CCceeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCC--CCC---CC-----------CCCCcc
Q 020110          226 LGAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVH--RFD---GE-----------TQPGLI  288 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~~~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~--~~~---~~-----------~~~~~~  288 (331)
                      ++|+|++|+|++++.++..+..+++|+++ ++++++.|+++.+.+.. -..++  .+.   ..           ......
T Consensus       378 ~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~  456 (508)
T 4f6l_B          378 VDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-IELVSDESFNEILQKQDMYETIGLTSVDREQQ  456 (508)
T ss_dssp             EECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTCCHHHHHHHHTGGGSE
T ss_pred             EEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcCCccchhcccccccCc
Confidence            99999999999999999887755588765 56799999999999754 11111  000   00           000112


Q ss_pred             ccccchHH----HHhhCCCcc-CHHHHHHHHHHHHHHc
Q 020110          289 PCKDAAKR----LMDLGLVFT-PVEDAVRETVESLKAK  321 (331)
Q Consensus       289 ~~~~~~~k----~~~lG~~~~-~~~~~l~~~~~~~~~~  321 (331)
                      ...+|+++    ++.+||.+. .-++.++.+++|+++.
T Consensus       457 ~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~  494 (508)
T 4f6l_B          457 LAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI  494 (508)
T ss_dssp             ECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred             ceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence            34455544    356899985 5577889999888764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=5e-35  Score=251.72  Aligned_cols=254  Identities=19%  Similarity=0.155  Sum_probs=187.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHC--CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      +|||||||||||++++++|+++  |+ +|++++|++.....+...      +++++.+|++|++++.++++++|+|||+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~------~~~~~~~D~~d~~~~~~~~~~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQ------GITVRQADYGDEAALTSALQGVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHT------TCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcC------CCeEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence            5899999999999999999998  99 999999987655443332      68899999999999999999999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      +...            ..|+.++.+++++|++.++++|||+||.++ +.  .             +       ..|+.+|
T Consensus        74 ~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~-~~--~-------------~-------~~y~~sK  118 (286)
T 2zcu_A           74 SSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHA-DT--S-------------P-------LGLADEH  118 (286)
T ss_dssp             --------------------CHHHHHHHHHHHHTCCEEEEEEETTT-TT--C-------------C-------STTHHHH
T ss_pred             CCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCC-CC--C-------------c-------chhHHHH
Confidence            8521            147889999999999999999999998743 21  0             1       2799999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc--cCcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      ..+|++++    +.+++++++||+.++++..    ..    +.+...+....  .++..++++|++|+|++++.++..+.
T Consensus       119 ~~~e~~~~----~~~~~~~ilrp~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  186 (286)
T 2zcu_A          119 IETEKMLA----DSGIVYTLLRNGWYSENYL----AS----APAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG  186 (286)
T ss_dssp             HHHHHHHH----HHCSEEEEEEECCBHHHHH----TT----HHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHH----HcCCCeEEEeChHHhhhhH----HH----hHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC
Confidence            99999886    4689999999987666531    11    12222222222  35678999999999999999998765


Q ss_pred             CCc-eEEEec-cccCHHHHHHHHHHhCCCCCCCCCCCCCC---------CCc----------------cccccchHHH-H
Q 020110          247 ASG-RYLCTN-GIYQFGDFAERVSKLFPEFPVHRFDGETQ---------PGL----------------IPCKDAAKRL-M  298 (331)
Q Consensus       247 ~~g-~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~~~---------~~~----------------~~~~~~~~k~-~  298 (331)
                      ..| +|++++ +.+|+.|+++.+.+.++ .+++....+..         ...                .....|++++ +
T Consensus       187 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (286)
T 2zcu_A          187 HEGKVYELAGDSAWTLTQLAAELTKQSG-KQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSK  265 (286)
T ss_dssp             CTTCEEEECCSSCBCHHHHHHHHHHHHS-SCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHH
T ss_pred             CCCceEEEeCCCcCCHHHHHHHHHHHHC-CCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHH
Confidence            444 787765 57999999999999984 33221111100         000                1245678899 6


Q ss_pred             hhCCCccCHHHHHHHHHHHHH
Q 020110          299 DLGLVFTPVEDAVRETVESLK  319 (331)
Q Consensus       299 ~lG~~~~~~~~~l~~~~~~~~  319 (331)
                      .|||.+++++++|+++++|+.
T Consensus       266 ~lg~~~~~~~e~l~~~~~~~~  286 (286)
T 2zcu_A          266 LIGHPTTTLAESVSHLFNVNN  286 (286)
T ss_dssp             HHTSCCCCHHHHHHGGGC---
T ss_pred             HhCcCCCCHHHHHHHHHhhcC
Confidence            799877999999999999873

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=2.3e-34  Score=245.11  Aligned_cols=235  Identities=20%  Similarity=0.213  Sum_probs=185.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      ||+|||||||||||++++++|+++|+ +|++++|++....  .      . +++++.+|++|++++.++++++|+|||+|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--~------~-~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a   71 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAH-EVRLSDIVDLGAA--E------A-HEEIVACDLADAQAVHDLVKDCDGIIHLG   71 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEE-EEEECCSSCCCCC--C------T-TEEECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCC-EEEEEeCCCcccc--C------C-CccEEEccCCCHHHHHHHHcCCCEEEECC
Confidence            46899999999999999999999999 9999999765321  1      1 68899999999999999999999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      +...    ..+....+++|+.++.++++++++.++++|||+||..++...+.  ..+++|+++..|.      +.|+.+|
T Consensus        72 ~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~--~~~~~E~~~~~~~------~~Y~~sK  139 (267)
T 3ay3_A           72 GVSV----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPR--TTRIDTEVPRRPD------SLYGLSK  139 (267)
T ss_dssp             SCCS----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBT--TSCBCTTSCCCCC------SHHHHHH
T ss_pred             cCCC----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCC--CCCCCCCCCCCCC------ChHHHHH
Confidence            9752    34467889999999999999999999999999999855433232  3678898876654      4899999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCCC
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~  248 (331)
                      ..+|.+++.++++++++++++||+++|+..   .                  .++..++|+|++|+|+++..++..+...
T Consensus       140 ~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~---~------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~  198 (267)
T 3ay3_A          140 CFGEDLASLYYHKFDIETLNIRIGSCFPKP---K------------------DARMMATWLSVDDFMRLMKRAFVAPKLG  198 (267)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEEECBCSSSC---C------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCC
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeceeecCCC---C------------------CCCeeeccccHHHHHHHHHHHHhCCCCC
Confidence            999999998887889999999999999421   1                  0112468999999999999999877543


Q ss_pred             -ceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHHHhhCCCc-cCHHHHHHHHHH
Q 020110          249 -GRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVF-TPVEDAVRETVE  316 (331)
Q Consensus       249 -g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~-~~~~~~l~~~~~  316 (331)
                       ++|+..+..                              .....|..+++.+||+| .+++++++++.+
T Consensus       199 ~~~~~~~~~~------------------------------~~~~~d~~~~~~lg~~p~~~~~~~~~~~~~  238 (267)
T 3ay3_A          199 CTVVYGASAN------------------------------TESWWDNDKSAFLGWVPQDSSEIWREEIEQ  238 (267)
T ss_dssp             EEEEEECCSC------------------------------SSCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred             ceeEecCCCc------------------------------cccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence             355543211                              01223444446789999 599999988764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=6.5e-34  Score=235.17  Aligned_cols=208  Identities=19%  Similarity=0.246  Sum_probs=169.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCC-chHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-SGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~vih~a   88 (331)
                      |+|||||||||||++++++|+++|+ +|++++|++......       . +++++.+|++| ++++.++++++|+|||+|
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~-------~-~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a   71 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY-------N-NVKAVHFDVDWTPEEMAKQLHGMDAIINVS   71 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC-------T-TEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc-------C-CceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence            3899999999999999999999999 999999987543322       1 89999999999 999999999999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      +...        ...+++|+.++.++++++++.++++||++||.++..+      .+..| ++.      .+.+.|+.+|
T Consensus        72 g~~~--------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~------~~~~e-~~~------~~~~~Y~~sK  130 (219)
T 3dqp_A           72 GSGG--------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQP------EKWIG-AGF------DALKDYYIAK  130 (219)
T ss_dssp             CCTT--------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCG------GGCCS-HHH------HHTHHHHHHH
T ss_pred             cCCC--------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCC------Ccccc-ccc------ccccHHHHHH
Confidence            9754        2377889999999999999999999999999744221      23444 221      2335899999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCCC
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~  248 (331)
                      ..+|++++   +..+++++++||+.+||+......                ..++..+++++++|+|++++.++.++...
T Consensus       131 ~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~~----------------~~~~~~~~~i~~~Dva~~i~~~l~~~~~~  191 (219)
T 3dqp_A          131 HFADLYLT---KETNLDYTIIQPGALTEEEATGLI----------------DINDEVSASNTIGDVADTIKELVMTDHSI  191 (219)
T ss_dssp             HHHHHHHH---HSCCCEEEEEEECSEECSCCCSEE----------------EESSSCCCCEEHHHHHHHHHHHHTCGGGT
T ss_pred             HHHHHHHH---hccCCcEEEEeCceEecCCCCCcc----------------ccCCCcCCcccHHHHHHHHHHHHhCcccc
Confidence            99999986   378999999999999998643211                12356789999999999999999987665


Q ss_pred             c-eEEEeccccCHHHHHHH
Q 020110          249 G-RYLCTNGIYQFGDFAER  266 (331)
Q Consensus       249 g-~~~~~~~~~s~~e~~~~  266 (331)
                      | +|+++++..+++|+.+.
T Consensus       192 g~~~~i~~g~~~~~e~~~~  210 (219)
T 3dqp_A          192 GKVISMHNGKTAIKEALES  210 (219)
T ss_dssp             TEEEEEEECSEEHHHHHHT
T ss_pred             CcEEEeCCCCccHHHHHHH
Confidence            5 78876667999998764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=3.2e-33  Score=237.92  Aligned_cols=211  Identities=21%  Similarity=0.273  Sum_probs=175.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      ||+||||||+||||++++++|+++|+ +|++++|++....        .. +++++.+|++|++++.++++++|+|||+|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~--------~~-~~~~~~~Dl~d~~~~~~~~~~~D~vi~~A   72 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSPLDPA--------GP-NEECVQCDLADANAVNAMVAGCDGIVHLG   72 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSCCCCC--------CT-TEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCcccc--------CC-CCEEEEcCCCCHHHHHHHHcCCCEEEECC
Confidence            57899999999999999999999999 9999999875433        11 89999999999999999999999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      |...    ..++...+++|+.++.++++++++.+.++|||+||..++...+.  ..+++|+.+..|.      +.|+.+|
T Consensus        73 g~~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~--~~~~~e~~~~~~~------~~Y~~sK  140 (267)
T 3rft_A           73 GISV----EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQ--TERLGPDVPARPD------GLYGVSK  140 (267)
T ss_dssp             SCCS----CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBT--TSCBCTTSCCCCC------SHHHHHH
T ss_pred             CCcC----cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCC--CCCCCCCCCCCCC------ChHHHHH
Confidence            9743    45578899999999999999999999999999999866543333  3678888776655      4899999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCCC
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~  248 (331)
                      ...|.+++.++++++++++++||+.++|+....                     ...++|++++|+++++..++..+...
T Consensus       141 ~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~---------------------~~~~~~~~~~d~a~~~~~~~~~~~~~  199 (267)
T 3rft_A          141 CFGENLARMYFDKFGQETALVRIGSCTPEPNNY---------------------RMLSTWFSHDDFVSLIEAVFRAPVLG  199 (267)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECBCSSSCCST---------------------THHHHBCCHHHHHHHHHHHHHCSCCC
T ss_pred             HHHHHHHHHHHHHhCCeEEEEEeecccCCCCCC---------------------CceeeEEcHHHHHHHHHHHHhCCCCC
Confidence            999999999998899999999999999974322                     13467899999999999999887665


Q ss_pred             c-e-EEEeccccCHHH
Q 020110          249 G-R-YLCTNGIYQFGD  262 (331)
Q Consensus       249 g-~-~~~~~~~~s~~e  262 (331)
                      + + |++++++.++.+
T Consensus       200 ~~~~~~~s~~~~~~~~  215 (267)
T 3rft_A          200 CPVVWGASANDAGWWD  215 (267)
T ss_dssp             SCEEEECCCCTTCCBC
T ss_pred             ceEEEEeCCCCCCccc
Confidence            4 4 455665554443

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=1.7e-33  Score=235.41  Aligned_cols=215  Identities=19%  Similarity=0.237  Sum_probs=170.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcE-EEEEccCCCchHHHHHhcCccEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .++|+|||||||||||++++++|+++|+ +|++++|++.....+...      ++ +++.+|++  +++.+.+.++|+||
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~------~~~~~~~~Dl~--~~~~~~~~~~D~vi   89 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRER------GASDIVVANLE--EDFSHAFASIDAVV   89 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHT------TCSEEEECCTT--SCCGGGGTTCSEEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhC------CCceEEEcccH--HHHHHHHcCCCEEE
Confidence            4467999999999999999999999999 999999987765554443      68 89999998  67778889999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      |+|+...    ..++...+++|+.++.++++++++.++++||++||.....+          |.++ .+      ...|+
T Consensus        90 ~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~----------~~~~-~~------~~~Y~  148 (236)
T 3e8x_A           90 FAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP----------DQGP-MN------MRHYL  148 (236)
T ss_dssp             ECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG----------GGSC-GG------GHHHH
T ss_pred             ECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC----------CCCh-hh------hhhHH
Confidence            9999754    24578899999999999999999999999999999533211          1111 12      24799


Q ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      .+|..+|.+++    ..+++++++||+.++|+........             ...++..+++++++|+|++++.++..+
T Consensus       149 ~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~-------------~~~~~~~~~~i~~~Dva~~~~~~~~~~  211 (236)
T 3e8x_A          149 VAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKVTV-------------SPHFSEITRSITRHDVAKVIAELVDQQ  211 (236)
T ss_dssp             HHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEEEE-------------ESSCSCCCCCEEHHHHHHHHHHHTTCG
T ss_pred             HHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeEEe-------------ccCCCcccCcEeHHHHHHHHHHHhcCc
Confidence            99999999886    7899999999999999864321100             012234689999999999999999887


Q ss_pred             CCCc-eEEEeccccCHHHHHHHHH
Q 020110          246 AASG-RYLCTNGIYQFGDFAERVS  268 (331)
Q Consensus       246 ~~~g-~~~~~~~~~s~~e~~~~i~  268 (331)
                      ...| +|+++++..++.|+++.++
T Consensus       212 ~~~g~~~~v~~~~~~~~e~~~~i~  235 (236)
T 3e8x_A          212 HTIGKTFEVLNGDTPIAKVVEQLG  235 (236)
T ss_dssp             GGTTEEEEEEECSEEHHHHHHTC-
T ss_pred             cccCCeEEEeCCCcCHHHHHHHhc
Confidence            6555 7877666799999998765

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=100.00  E-value=1e-32  Score=228.85  Aligned_cols=218  Identities=11%  Similarity=0.031  Sum_probs=164.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+|||||||||||++++++|+++|+ +|++++|++.....+...      +++++.+|++|+++  +.+.++|+|||+|+
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~------~~~~~~~D~~d~~~--~~~~~~d~vi~~ag   71 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGA------TVATLVKEPLVLTE--ADLDSVDAVVDALS   71 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCT------TSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCC------CceEEecccccccH--hhcccCCEEEECCc
Confidence            4799999999999999999999999 999999986554433221      78999999999988  77899999999999


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (331)
                      ....       ....+.|+.++.++++++++.+ ++||++||+++++........+.+|.....|      .+.|+.+|.
T Consensus        72 ~~~~-------~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~------~~~y~~sK~  137 (224)
T 3h2s_A           72 VPWG-------SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAAS------QPWYDGALY  137 (224)
T ss_dssp             CCTT-------SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG------STTHHHHHH
T ss_pred             cCCC-------cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCcc------chhhHHHHH
Confidence            7521       1235789999999999999999 9999999987777655432234444443332      348999999


Q ss_pred             HHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCCCc
Q 020110          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG  249 (331)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g  249 (331)
                      .+|.+ ..+.++.+++++++||+.+||++....  ..       ........++..+++++++|+|++++.++.++...|
T Consensus       138 ~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~-------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g  207 (224)
T 3h2s_A          138 QYYEY-QFLQMNANVNWIGISPSEAFPSGPATS--YV-------AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIR  207 (224)
T ss_dssp             HHHHH-HHHTTCTTSCEEEEEECSBCCCCCCCC--EE-------EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTT
T ss_pred             HHHHH-HHHHhcCCCcEEEEcCccccCCCcccC--ce-------ecccccccCCCCCceEeHHHHHHHHHHHhcCccccC
Confidence            99954 445556799999999999999954332  10       112223345567899999999999999999987766


Q ss_pred             -eEEEec-cccCH
Q 020110          250 -RYLCTN-GIYQF  260 (331)
Q Consensus       250 -~~~~~~-~~~s~  260 (331)
                       +|++++ ...++
T Consensus       208 ~~~~~~~~~~~~~  220 (224)
T 3h2s_A          208 DRIVVRDADLEHH  220 (224)
T ss_dssp             SEEEEEECC----
T ss_pred             CEEEEecCcchhc
Confidence             786654 43443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=100.00  E-value=3e-32  Score=234.73  Aligned_cols=252  Identities=16%  Similarity=0.193  Sum_probs=182.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |+|||||||||||++++++|++. |+ +|++++|++.....+...      +++++.+|++|++++.++++++|+|||+|
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~------~v~~~~~D~~d~~~l~~~~~~~d~vi~~a   73 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRG------KVSVRQLDYFNQESMVEAFKGMDTVVFIP   73 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBT------TBEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhC------CCEEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence            47999999999999999999998 89 999999987665444332      89999999999999999999999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH-
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS-  167 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s-  167 (331)
                      +....          ...|+.++.+++++|++.++++|||+||.+.    ..        ..            +|..+ 
T Consensus        74 ~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~----~~--------~~------------~~~~~~  119 (289)
T 3e48_A           74 SIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYAD----QH--------NN------------PFHMSP  119 (289)
T ss_dssp             CCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCC----ST--------TC------------CSTTHH
T ss_pred             CCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCC----CC--------CC------------CCccch
Confidence            86431          2458899999999999999999999998521    11        00            12222 


Q ss_pred             -HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCC--ccCcCCCCceeHHHHHHHHHHhhcC
Q 020110          168 -KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD--TQEYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       168 -K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                       +..+|..+.    +.+++++++||+.++|+..        .++.....+...  ..++..++|++++|+|++++.++..
T Consensus       120 ~~~~~e~~~~----~~g~~~~ilrp~~~~~~~~--------~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~  187 (289)
T 3e48_A          120 YFGYASRLLS----TSGIDYTYVRMAMYMDPLK--------PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKN  187 (289)
T ss_dssp             HHHHHHHHHH----HHCCEEEEEEECEESTTHH--------HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHH----HcCCCEEEEeccccccccH--------HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcC
Confidence             223344333    6799999999999999732        122233222222  2566889999999999999999988


Q ss_pred             CCCCc-eEEEeccccCHHHHHHHHHHhCCCCCCCCCCCC---------C-CC------------CccccccchHHH-Hhh
Q 020110          245 PAASG-RYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGE---------T-QP------------GLIPCKDAAKRL-MDL  300 (331)
Q Consensus       245 ~~~~g-~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~---------~-~~------------~~~~~~~~~~k~-~~l  300 (331)
                      +...| +|+++++.+|+.|+++.+.+.++ .++......         . ..            .........+.+ +.+
T Consensus       188 ~~~~g~~~~~~~~~~s~~e~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  266 (289)
T 3e48_A          188 PDTWGKRYLLSGYSYDMKELAAILSEASG-TEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLV  266 (289)
T ss_dssp             GGGTTCEEEECCEEEEHHHHHHHHHHHHT-SCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHH
T ss_pred             CCcCCceEEeCCCcCCHHHHHHHHHHHHC-CceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHh
Confidence            76545 78766777999999999999984 333221111         0 00            001122344556 778


Q ss_pred             CCCccCHHHHHHHHH
Q 020110          301 GLVFTPVEDAVRETV  315 (331)
Q Consensus       301 G~~~~~~~~~l~~~~  315 (331)
                      |++|+++++.+++..
T Consensus       267 G~~p~~~~~~~~~~~  281 (289)
T 3e48_A          267 NDQPQTLQSFLQENI  281 (289)
T ss_dssp             SSCCCCHHHHHHC--
T ss_pred             CCCCCCHHHHHHHHH
Confidence            999999998887654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.98  E-value=6.1e-32  Score=240.78  Aligned_cols=210  Identities=20%  Similarity=0.179  Sum_probs=175.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+|||||||||||++|+++|+++|+.+|++++|+                         .|++++.++++++|+|||+|+
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~~~d~Vih~a~   55 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALLKADFIVHLAG   55 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHHHCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhccCCEEEECCc
Confidence            4899999999999999999999986355544332                         678889999999999999999


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      ....    .++...++.|+.++.+++++|++.+++ +|||+||.++ ++                       .+.|+.+|
T Consensus        56 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~-~~-----------------------~~~Y~~sK  107 (369)
T 3st7_A           56 VNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQA-TQ-----------------------DNPYGESK  107 (369)
T ss_dssp             SBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGG-GS-----------------------CSHHHHHH
T ss_pred             CCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhh-cC-----------------------CCCchHHH
Confidence            7653    345678899999999999999999987 9999999744 32                       13899999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC-ChhHHHHHHHHcCCCCcc--CcCCCCceeHHHHHHHHHHhhcCC
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      ..+|++++.++++.+++++++||+++||++..+.. ..+..++..+..+.++..  +++.++++|++|+|++++.++..+
T Consensus       108 ~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  187 (369)
T 3st7_A          108 LQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGT  187 (369)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCC
Confidence            99999999999889999999999999999875532 456677778888877663  557899999999999999999988


Q ss_pred             CC--CceEEEe-ccccCHHHHHHHHHHhCC
Q 020110          246 AA--SGRYLCT-NGIYQFGDFAERVSKLFP  272 (331)
Q Consensus       246 ~~--~g~~~~~-~~~~s~~e~~~~i~~~~~  272 (331)
                      ..  +++|+++ ++.+|+.|+++.+.+.++
T Consensus       188 ~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g  217 (369)
T 3st7_A          188 PTIENGVPTVPNVFKVTLGEIVDLLYKFKQ  217 (369)
T ss_dssp             CCEETTEECCSCCEEEEHHHHHHHHHHHHH
T ss_pred             cccCCceEEeCCCCceeHHHHHHHHHHHhC
Confidence            76  4578665 567999999999999873

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.98  E-value=4.9e-32  Score=224.15  Aligned_cols=215  Identities=12%  Similarity=0.096  Sum_probs=145.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+|||||||||||++++++|+++|+ +|++++|++.....+..       +++++.+|++|+++  +.+.++|+|||+|+
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~-------~~~~~~~D~~d~~~--~~~~~~d~vi~~ag   70 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTHK-------DINILQKDIFDLTL--SDLSDQNVVVDAYG   70 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHCS-------SSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhccC-------CCeEEeccccChhh--hhhcCCCEEEECCc
Confidence            4899999999999999999999999 99999998765443321       78999999999988  77899999999999


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (331)
                      ....         ..+.|+.++.++++++++.+++++|++||..++++.+..  .+..|+++..|.      +.|+.+|.
T Consensus        71 ~~~~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~--~~~~~~~~~~~~------~~y~~~k~  133 (221)
T 3ew7_A           71 ISPD---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDG--NTLLESKGLREA------PYYPTARA  133 (221)
T ss_dssp             SSTT---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC---------------------C------CCSCCHHH
T ss_pred             CCcc---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCC--ccccccCCCCCH------HHHHHHHH
Confidence            7321         246699999999999999989999999998777765543  345565544443      47999999


Q ss_pred             HHHHHHHHHHH-HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCCC
Q 020110          170 LAEKAAWEFAE-KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (331)
Q Consensus       170 ~~e~~~~~~~~-~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~  248 (331)
                      ..|.+ ..+.+ ..+++++++||+.+||+......  .     . ..+..+.......++++++|+|++++.++.++...
T Consensus       134 ~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~~--~-----~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~  204 (221)
T 3ew7_A          134 QAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTGD--Y-----Q-IGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHL  204 (221)
T ss_dssp             HHHHH-HHHHTTTTTSCEEEEECSSCCCCC-----------------------------CCCHHHHHHHHHHHHHSCSCT
T ss_pred             HHHHH-HHHHhhccCccEEEEeCcceecCCCccCc--e-----E-eccccceecCCCCceEeHHHHHHHHHHHHhCcccc
Confidence            99986 33333 67999999999999998432210  0     0 11222222222347999999999999999998776


Q ss_pred             c-eEEEec-cccCH
Q 020110          249 G-RYLCTN-GIYQF  260 (331)
Q Consensus       249 g-~~~~~~-~~~s~  260 (331)
                      | +|++++ ...+.
T Consensus       205 g~~~~~~~~~~~~~  218 (221)
T 3ew7_A          205 NEHFTVAGKLEHHH  218 (221)
T ss_dssp             TSEEECCC------
T ss_pred             CCEEEECCCCcccc
Confidence            6 686654 33443

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.98  E-value=5.6e-32  Score=238.95  Aligned_cols=270  Identities=13%  Similarity=0.084  Sum_probs=186.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc-hhh---cCCCCCCCcEEEEEccCCCchHHHHHhc--Ccc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLF---ALPGAGDANLRVFEADVLDSGAVSRAVE--GCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   82 (331)
                      +|+|||||||||||++|+++|++.|+ +|++++|++.... ...   .+..   .+++++.+|+.|.+++.++++  ++|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~---~~v~~~~~Dl~d~~~l~~~~~~~~~d   85 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALED---KGAIIVYGLINEQEAMEKILKEHEID   85 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHH---TTCEEEECCTTCHHHHHHHHHHTTCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHh---CCcEEEEeecCCHHHHHHHHhhCCCC
Confidence            46899999999999999999999999 9999999863221 111   1100   178999999999999999999  999


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccC
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (331)
                      +|||+|+..               |+.++.+++++|++.+ +++||+ |+.    +      .+.+|+++..|..     
T Consensus        86 ~Vi~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v~-S~~----g------~~~~e~~~~~p~~-----  134 (346)
T 3i6i_A           86 IVVSTVGGE---------------SILDQIALVKAMKAVGTIKRFLP-SEF----G------HDVNRADPVEPGL-----  134 (346)
T ss_dssp             EEEECCCGG---------------GGGGHHHHHHHHHHHCCCSEEEC-SCC----S------SCTTTCCCCTTHH-----
T ss_pred             EEEECCchh---------------hHHHHHHHHHHHHHcCCceEEee-ccc----C------CCCCccCcCCCcc-----
Confidence            999999862               6778899999999998 999987 532    1      2245555555543     


Q ss_pred             cchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHHHHH
Q 020110          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQ  238 (331)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~  238 (331)
                       .|+.+|..+|++++    +.+++++++||+.++|........    .......+....   .++..++|+|++|+|+++
T Consensus       135 -~y~~sK~~~e~~l~----~~g~~~tivrpg~~~g~~~~~~~~----~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~  205 (346)
T 3i6i_A          135 -NMYREKRRVRQLVE----ESGIPFTYICCNSIASWPYYNNIH----PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFT  205 (346)
T ss_dssp             -HHHHHHHHHHHHHH----HTTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHHH
T ss_pred             -hHHHHHHHHHHHHH----HcCCCEEEEEecccccccCccccc----cccccCCCceEEEccCCCceEEecCHHHHHHHH
Confidence             89999999999887    578999999999999976432111    010111222222   345789999999999999


Q ss_pred             HHhhcCCCCCc-eEEEe--ccccCHHHHHHHHHHhCCCCCCCCCCCCCC--------------------------CCccc
Q 020110          239 VLLFESPAASG-RYLCT--NGIYQFGDFAERVSKLFPEFPVHRFDGETQ--------------------------PGLIP  289 (331)
Q Consensus       239 ~~~l~~~~~~g-~~~~~--~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~--------------------------~~~~~  289 (331)
                      +.++..+...+ .|++.  ++.+|+.|+++.+.+.+| .+++.......                          .....
T Consensus       206 ~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~  284 (346)
T 3i6i_A          206 MKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIG-RTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVN  284 (346)
T ss_dssp             HHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHT-SCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTS
T ss_pred             HHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHC-CCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcc
Confidence            99998875434 56544  467999999999999984 33322111000                          00000


Q ss_pred             ccc---chHHHHh--hCCCccCHHHHHHHHHHHHHHcCC
Q 020110          290 CKD---AAKRLMD--LGLVFTPVEDAVRETVESLKAKGF  323 (331)
Q Consensus       290 ~~~---~~~k~~~--lG~~~~~~~~~l~~~~~~~~~~~~  323 (331)
                      ..+   +..++++  -++++++++|.++++++|++++..
T Consensus       285 ~~~~~~~~~~~~~~~p~~~~t~~~e~l~~~~~~~~~~~~  323 (346)
T 3i6i_A          285 FSIDGPEDVEVTTLYPEDSFRTVEECFGEYIVKMEEKQP  323 (346)
T ss_dssp             SCCCSTTEEEHHHHSTTCCCCCHHHHHHHHHCC------
T ss_pred             cccCCCCcccHHHhCCCCCcCcHHHHHHHHHHHhhcccc
Confidence            111   1112322  467889999999999999987643

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.97  E-value=1.5e-31  Score=225.80  Aligned_cols=229  Identities=20%  Similarity=0.165  Sum_probs=169.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC--CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      +||+||||||+||||++++++|+++  |+ +|++++|++.....+   .   . +++++.+|++|++++.++++++|+||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~---~---~-~~~~~~~D~~d~~~~~~~~~~~d~vi   74 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI---G---G-EADVFIGDITDADSINPAFQGIDALV   74 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT---T---C-CTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc---C---C-CeeEEEecCCCHHHHHHHHcCCCEEE
Confidence            4679999999999999999999999  89 999999975433222   1   1 67789999999999999999999999


Q ss_pred             EcccCCCCCC------C-------CCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           86 HVASPCTLED------P-------VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        86 h~a~~~~~~~------~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      |+|+......      +       .+.....+++|+.++.++++++++.++++|||+||.++.           .+..+.
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~-----------~~~~~~  143 (253)
T 1xq6_A           75 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGT-----------NPDHPL  143 (253)
T ss_dssp             ECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTT-----------CTTCGG
T ss_pred             EeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCC-----------CCCCcc
Confidence            9998653210      0       111234679999999999999999999999999997431           111111


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHH
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  232 (331)
                      .+ +   ....|+.+|..+|.+++    +.+++++++||+.+||+..... ...        .+..........+++|++
T Consensus       144 ~~-~---~~~~y~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~  206 (253)
T 1xq6_A          144 NK-L---GNGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVR-ELL--------VGKDDELLQTDTKTVPRA  206 (253)
T ss_dssp             GG-G---GGCCHHHHHHHHHHHHH----TSSSCEEEEEECEEECSCSSSS-CEE--------EESTTGGGGSSCCEEEHH
T ss_pred             cc-c---cchhHHHHHHHHHHHHH----hCCCceEEEecceeecCCcchh-hhh--------ccCCcCCcCCCCcEEcHH
Confidence            11 1   11358889999998876    5799999999999999974321 110        111111111246799999


Q ss_pred             HHHHHHHHhhcCCCCCc-eEEEec-c---ccCHHHHHHHHHHhCC
Q 020110          233 DVAKAQVLLFESPAASG-RYLCTN-G---IYQFGDFAERVSKLFP  272 (331)
Q Consensus       233 D~a~a~~~~l~~~~~~g-~~~~~~-~---~~s~~e~~~~i~~~~~  272 (331)
                      |+|++++.++..+...| +|++++ +   ++|+.|+++.+.+.++
T Consensus       207 Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g  251 (253)
T 1xq6_A          207 DVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  251 (253)
T ss_dssp             HHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCC
T ss_pred             HHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhC
Confidence            99999999998765545 676544 2   4899999999999873

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.97  E-value=4.2e-30  Score=222.39  Aligned_cols=262  Identities=16%  Similarity=0.116  Sum_probs=187.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccc--hhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      +|+||||||||+||++++++|+++| + +|++++|++....  .+...      +++++.+|+.|++++.++++++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~------~~~~~~~D~~d~~~l~~~~~~~d~vi   77 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQ------GAEVVQGDQDDQVIMELALNGAYATF   77 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHT------TCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHC------CCEEEEecCCCHHHHHHHHhcCCEEE
Confidence            4689999999999999999999998 9 9999999875431  12221      78899999999999999999999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      |+++....        ...+.|+.++.++++++++.++++|||+||. .+++...        ..         +...|+
T Consensus        78 ~~a~~~~~--------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~-~~~~~~~--------~~---------~~~~y~  131 (299)
T 2wm3_A           78 IVTNYWES--------CSQEQEVKQGKLLADLARRLGLHYVVYSGLE-NIKKLTA--------GR---------LAAAHF  131 (299)
T ss_dssp             ECCCHHHH--------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCC-CHHHHTT--------TS---------CCCHHH
T ss_pred             EeCCCCcc--------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCc-cccccCC--------Cc---------ccCchh
Confidence            99975321        1246788899999999999999999997764 4443211        10         113799


Q ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCC----CccCcCCCCceeHHHHHHHHHHh
Q 020110          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK----DTQEYHWLGAVPVKDVAKAQVLL  241 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~v~D~a~a~~~~  241 (331)
                      .+|..+|++++    +.|++++++||+.+||+........      ....|..    .+.++..++|+|++|+|+++..+
T Consensus       132 ~sK~~~e~~~~----~~gi~~~ilrp~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  201 (299)
T 2wm3_A          132 DGKGEVEEYFR----DIGVPMTSVRLPCYFENLLSHFLPQ------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSL  201 (299)
T ss_dssp             HHHHHHHHHHH----HHTCCEEEEECCEEGGGGGTTTCCE------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHH
T ss_pred             hHHHHHHHHHH----HCCCCEEEEeecHHhhhchhhcCCc------ccCCCCEEEEEecCCCCccceecHHHHHHHHHHH
Confidence            99999999886    4689999999999999754311110      0112311    12466788999999999999999


Q ss_pred             hcCCC-CCc-eEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCC-----CCc-------------cccccchHHH-Hhh
Q 020110          242 FESPA-ASG-RYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQ-----PGL-------------IPCKDAAKRL-MDL  300 (331)
Q Consensus       242 l~~~~-~~g-~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-----~~~-------------~~~~~~~~k~-~~l  300 (331)
                      +..+. ..| .|+++++.+|+.|+++.+.+.+| .++........     ...             .... ..... +.+
T Consensus       202 l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  279 (299)
T 2wm3_A          202 LKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTR-KVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPD-RDIELTLRL  279 (299)
T ss_dssp             HHSHHHHTTCEEECCSEEECHHHHHHHHHHHHS-SCEEECCCCTHHHHTTCSTTHHHHHHHHHHHTTCCC-CCHHHHHHH
T ss_pred             HcChhhhCCeEEEeeeccCCHHHHHHHHHHHHC-CCceeEecCHHHHHhcCCCcHHHHHHHHHHHHhcCC-CCHHHHHHh
Confidence            98642 234 78877778999999999999984 33221111100     000             0011 12234 668


Q ss_pred             CCCccCHHHHHHHHH
Q 020110          301 GLVFTPVEDAVRETV  315 (331)
Q Consensus       301 G~~~~~~~~~l~~~~  315 (331)
                      |.+|++|++.+++..
T Consensus       280 g~~~~~~~~~~~~~~  294 (299)
T 2wm3_A          280 NPKALTLDQWLEQHK  294 (299)
T ss_dssp             CTTCCCHHHHHHHHG
T ss_pred             CCCCCCHHHHHHhCh
Confidence            888889999887753

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.96  E-value=4e-29  Score=209.59  Aligned_cols=209  Identities=17%  Similarity=0.086  Sum_probs=159.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCC-EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ++|+||||||+|+||++++++|+++|+. +|++++|++.........      ++.++.+|++|++++.++++++|+|||
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~------~~~~~~~D~~d~~~~~~~~~~~d~vi~   90 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYK------NVNQEVVDFEKLDDYASAFQGHDVGFC   90 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGG------GCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccC------CceEEecCcCCHHHHHHHhcCCCEEEE
Confidence            3579999999999999999999999963 799999987544322211      678899999999999999999999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +|+....   ...+...+++|+.++.++++++++.++++||++||.++ +..+                     ...|+.
T Consensus        91 ~ag~~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~-~~~~---------------------~~~Y~~  145 (242)
T 2bka_A           91 CLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA-DKSS---------------------NFLYLQ  145 (242)
T ss_dssp             CCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC-CTTC---------------------SSHHHH
T ss_pred             CCCcccc---cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC-CCCC---------------------cchHHH
Confidence            9986432   12346788999999999999999999999999999744 2211                     137999


Q ss_pred             HHHHHHHHHHHHHHHcCC-eEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          167 SKTLAEKAAWEFAEKHGV-DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~-~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      +|...|.+++    ..++ +++++||+.+||+.....  ....+........+..++  ...+++++|+|++++.++..+
T Consensus       146 sK~~~e~~~~----~~~~~~~~~vrpg~v~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~~~~~~~  217 (242)
T 2bka_A          146 VKGEVEAKVE----ELKFDRYSVFRPGVLLCDRQESR--PGEWLVRKFFGSLPDSWA--SGHSVPVVTVVRAMLNNVVRP  217 (242)
T ss_dssp             HHHHHHHHHH----TTCCSEEEEEECCEEECTTGGGS--HHHHHHHHHHCSCCTTGG--GGTEEEHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHH----hcCCCCeEEEcCceecCCCCCCc--HHHHHHHHhhcccCcccc--CCcccCHHHHHHHHHHHHhCc
Confidence            9999999886    5578 699999999999975321  122222333322222122  245899999999999999988


Q ss_pred             CCCceEEEec
Q 020110          246 AASGRYLCTN  255 (331)
Q Consensus       246 ~~~g~~~~~~  255 (331)
                      ...+.|++++
T Consensus       218 ~~~~~~~~~~  227 (242)
T 2bka_A          218 RDKQMELLEN  227 (242)
T ss_dssp             CCSSEEEEEH
T ss_pred             cccCeeEeeH
Confidence            7777776654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.96  E-value=3.5e-29  Score=214.63  Aligned_cols=240  Identities=16%  Similarity=0.120  Sum_probs=169.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+......+.....  . ++.++.+|++|++++.++++       +
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYP--D-RAEAISLDVTDGERIDVVAADVLARYGR   79 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCT--T-TEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcc--C-CceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            467999999999999999999999999 99999998765444332211  1 78999999999999888776       6


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHH----HHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNV----LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+||.....    ...+++...+++|+.++.++    ++.+++.+.+++|++||..+..+.+..           
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  148 (281)
T 3m1a_A           80 VDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGF-----------  148 (281)
T ss_dssp             CSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC-----------
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCc-----------
Confidence            89999999976432    22334567899999995554    444566677899999998664432221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC----hhHHHHHHHHcCCCCccCcCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN----ASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  225 (331)
                               ..|+.+|...|.+.+.++.+   +|+++++++||.+.++.......    ....+................
T Consensus       149 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (281)
T 3m1a_A          149 ---------SAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDG  219 (281)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC---
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccC
Confidence                     37999999999999998877   79999999999998886432110    011111111111111111234


Q ss_pred             CCceeHHHHHHHHHHhhcCCCCCceEEEeccc-cCHHHHHHHHHHhC
Q 020110          226 LGAVPVKDVAKAQVLLFESPAASGRYLCTNGI-YQFGDFAERVSKLF  271 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~~~g~~~~~~~~-~s~~e~~~~i~~~~  271 (331)
                      .++.+++|+|++++.++..+...+.|+++++. ..+.+.+..+.+.+
T Consensus       220 ~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~  266 (281)
T 3m1a_A          220 SQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAEL  266 (281)
T ss_dssp             --CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence            67889999999999999988776777665544 55667776666544

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.96  E-value=4.7e-30  Score=211.32  Aligned_cols=204  Identities=16%  Similarity=0.137  Sum_probs=156.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +|+|||||||||||++++++|+++|+ .+|++++|++...         .. +++++.+|+.+++++.+++  +|+|||+
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~---------~~-~~~~~~~D~~~~~~~~~~~--~d~vi~~   72 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------HP-RLDNPVGPLAELLPQLDGS--IDTAFCC   72 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------CT-TEECCBSCHHHHGGGCCSC--CSEEEEC
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc---------CC-CceEEeccccCHHHHHHhh--hcEEEEC
Confidence            46999999999999999999999995 3899999987541         11 7888999999988887777  9999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |+....  ...++...+++|+.++.++++++++.++++|||+||..+ ++.+                     .+.|+.+
T Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~-~~~~---------------------~~~y~~s  128 (215)
T 2a35_A           73 LGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGA-DAKS---------------------SIFYNRV  128 (215)
T ss_dssp             CCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC-CTTC---------------------SSHHHHH
T ss_pred             eeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCccc-CCCC---------------------ccHHHHH
Confidence            986542  123467889999999999999999999999999999744 3211                     1379999


Q ss_pred             HHHHHHHHHHHHHHcCCe-EEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          168 KTLAEKAAWEFAEKHGVD-VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~-~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      |..+|.+++    ..+++ ++++||+.+||+.....  ..    ..+. +.....++..++++|++|+|++++.++.++.
T Consensus       129 K~~~e~~~~----~~~~~~~~~vrp~~v~g~~~~~~--~~----~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  197 (215)
T 2a35_A          129 KGELEQALQ----EQGWPQLTIARPSLLFGPREEFR--LA----EILA-APIARILPGKYHGIEACDLARALWRLALEEG  197 (215)
T ss_dssp             HHHHHHHHT----TSCCSEEEEEECCSEESTTSCEE--GG----GGTT-CCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHH----HcCCCeEEEEeCceeeCCCCcch--HH----HHHH-HhhhhccCCCcCcEeHHHHHHHHHHHHhcCC
Confidence            999999987    46899 99999999999975421  11    1111 1112223346789999999999999998775


Q ss_pred             CCceEEEec-cccCH
Q 020110          247 ASGRYLCTN-GIYQF  260 (331)
Q Consensus       247 ~~g~~~~~~-~~~s~  260 (331)
                       .+.|++++ +..++
T Consensus       198 -~~~~~i~~~~~~~~  211 (215)
T 2a35_A          198 -KGVRFVESDELRKL  211 (215)
T ss_dssp             -SEEEEEEHHHHHHH
T ss_pred             -CCceEEcHHHHHHh
Confidence             66887665 33443

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.96  E-value=5.8e-28  Score=197.38  Aligned_cols=199  Identities=17%  Similarity=0.132  Sum_probs=150.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+||||||||+||++++++|+++|+ +|++++|++.......     .. +++++.+|++|++++.++++++|+|||+|+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~-----~~-~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   76 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEG-----PR-PAHVVVGDVLQAADVDKTVAGQDAVIVLLG   76 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSS-----CC-CSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhccccc-----CC-ceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence            5899999999999999999999999 9999999765432211     11 788999999999999999999999999998


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHH
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (331)
                      ....    .   ...++|+.++.++++++++.++++||++||.++ ++....  .+.       +.      ..|+.+|.
T Consensus        77 ~~~~----~---~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~-~~~~~~--~~~-------~~------~~y~~~K~  133 (206)
T 1hdo_A           77 TRND----L---SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFL-LWDPTK--VPP-------RL------QAVTDDHI  133 (206)
T ss_dssp             CTTC----C---SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGG-TSCTTC--SCG-------GG------HHHHHHHH
T ss_pred             CCCC----C---CccchHHHHHHHHHHHHHHhCCCeEEEEeeeee-ccCccc--ccc-------cc------hhHHHHHH
Confidence            6543    1   123589999999999999999999999999743 332211  000       12      37999999


Q ss_pred             HHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC-CCceeHHHHHHHHHHhhcCCCCC
Q 020110          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW-LGAVPVKDVAKAQVLLFESPAAS  248 (331)
Q Consensus       170 ~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~D~a~a~~~~l~~~~~~  248 (331)
                      .+|.+++    +.+++++++||+.+ ++.........             ..++.. .++++++|+|++++.++.++...
T Consensus       134 ~~e~~~~----~~~i~~~~lrp~~~-~~~~~~~~~~~-------------~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  195 (206)
T 1hdo_A          134 RMHKVLR----ESGLKYVAVMPPHI-GDQPLTGAYTV-------------TLDGRGPSRVISKHDLGHFMLRCLTTDEYD  195 (206)
T ss_dssp             HHHHHHH----HTCSEEEEECCSEE-ECCCCCSCCEE-------------ESSSCSSCSEEEHHHHHHHHHHTTSCSTTT
T ss_pred             HHHHHHH----hCCCCEEEEeCCcc-cCCCCCcceEe-------------cccCCCCCCccCHHHHHHHHHHHhcCcccc
Confidence            9999885    67899999999997 43321110000             001112 58999999999999999887655


Q ss_pred             c-eEEEecc
Q 020110          249 G-RYLCTNG  256 (331)
Q Consensus       249 g-~~~~~~~  256 (331)
                      | .|+++++
T Consensus       196 g~~~~i~~g  204 (206)
T 1hdo_A          196 GHSTYPSHQ  204 (206)
T ss_dssp             TCEEEEECC
T ss_pred             ccceeeecc
Confidence            5 6766553

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.96  E-value=6.8e-29  Score=219.16  Aligned_cols=220  Identities=16%  Similarity=0.129  Sum_probs=165.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhhcCCCCCCCcEEEEEcc-CCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEAD-VLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D-l~~~~~~~~~~~~~d~vi   85 (331)
                      +|+|||||||||||++|+++|+++|+ +|++++|++...  ..+...    . +++++.+| ++|++++.++++++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~l~~~----~-~v~~v~~D~l~d~~~l~~~~~~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAI----P-NVTLFQGPLLNNVPLMDTLFEGAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTS----T-TEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhhHHHHhhc----C-CcEEEECCccCCHHHHHHHHhcCCEEE
Confidence            46899999999999999999999999 999999987653  222211    1 68899999 999999999999999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccce-eccCCCCCCccccCCCCCChhhhhccCcc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISA-IVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~-~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (331)
                      |+++...           ...|..+ .+++++|++.+ +++|||+||... .++.                    .+.+.
T Consensus        79 ~~a~~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~--------------------~~~~~  126 (352)
T 1xgk_A           79 INTTSQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP--------------------WPAVP  126 (352)
T ss_dssp             ECCCSTT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS--------------------CCCCT
T ss_pred             EcCCCCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC--------------------CCCcc
Confidence            9987431           1346666 89999999998 999999998741 2211                    01137


Q ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCC---c-cCcCCCCceeH-HHHHHHH
Q 020110          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD---T-QEYHWLGAVPV-KDVAKAQ  238 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~v~v-~D~a~a~  238 (331)
                      |+.+|..+|++++    +.+++++++||+ +||++.......... ......|...   . .+++.++++|+ +|+|+++
T Consensus       127 y~~sK~~~E~~~~----~~gi~~~ivrpg-~~g~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai  200 (352)
T 1xgk_A          127 MWAPKFTVENYVR----QLGLPSTFVYAG-IYNNNFTSLPYPLFQ-MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPAL  200 (352)
T ss_dssp             TTHHHHHHHHHHH----TSSSCEEEEEEC-EEGGGCBSSSCSSCB-EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH----HcCCCEEEEecc-eecCCchhccccccc-ccccCCCceEEeeccCCCCceeeEecHHHHHHHH
Confidence            9999999999987    458999999976 788865322110000 0001123221   1 35678999999 8999999


Q ss_pred             HHhhcCCC---CCceEEEeccccCHHHHHHHHHHhCC
Q 020110          239 VLLFESPA---ASGRYLCTNGIYQFGDFAERVSKLFP  272 (331)
Q Consensus       239 ~~~l~~~~---~~g~~~~~~~~~s~~e~~~~i~~~~~  272 (331)
                      +.++..+.   .+++|+++++.+|+.|+++.+.+.++
T Consensus       201 ~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G  237 (352)
T 1xgk_A          201 LQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALN  237 (352)
T ss_dssp             HHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHT
T ss_pred             HHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHC
Confidence            99998652   34578888878999999999999984

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=1.5e-27  Score=204.20  Aligned_cols=239  Identities=18%  Similarity=0.188  Sum_probs=172.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+........+.....+ ++.++.+|++|++++.++++       +
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   92 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKHGK   92 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCC-ceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999 99999887543322221111112 68999999999999888876       6


Q ss_pred             ccEEEEcccCCCC------CCCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           81 CKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        81 ~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      +|+|||+||....      ....+.+...+++|+.++.++++++...    +.+++|++||..++.+.+.          
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------  162 (278)
T 2bgk_A           93 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG----------  162 (278)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT----------
T ss_pred             CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC----------
Confidence            8999999997532      1112345678999999999999987653    5679999999755433220          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                               ....|+.+|...|.+.+.++.+   +|++++++||+.++|+...............+....+    .....
T Consensus       163 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~  229 (278)
T 2bgk_A          163 ---------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA----NLKGT  229 (278)
T ss_dssp             ---------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC----SSCSC
T ss_pred             ---------CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc----ccccc
Confidence                     1137999999999999988765   5899999999999999754322111222222222211    12356


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCc-eEEEec-cccCHHHHHHHHHHhC
Q 020110          228 AVPVKDVAKAQVLLFESP--AASG-RYLCTN-GIYQFGDFAERVSKLF  271 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~-~~~s~~e~~~~i~~~~  271 (331)
                      +++++|+|++++.++...  ...| .|++.+ ...++.|+++.+.+.+
T Consensus       230 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          230 LLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             cCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            899999999999998653  3446 566654 5689999999887653

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=2.8e-28  Score=212.33  Aligned_cols=226  Identities=15%  Similarity=0.148  Sum_probs=160.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc--ch---hhcCCCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SH---LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      ||+|||||||||||++++++|++.|+ +|++++|+....  ..   +..+..  . +++++.+|+.|++++.++++++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~--~-~~~~~~~D~~d~~~l~~~~~~~d~   79 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQ--L-GAKLIEASLDDHQRLVDALKQVDV   79 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHT--T-TCEEECCCSSCHHHHHHHHTTCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHh--C-CeEEEeCCCCCHHHHHHHHhCCCE
Confidence            56899999999999999999999999 999999986431  11   111100  1 789999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      |||+++.....           .|+.++.+++++|++.+ +++||+ |+. .  ....   .+   +.+..|.     ..
T Consensus        80 vi~~a~~~~~~-----------~~~~~~~~l~~aa~~~g~v~~~v~-S~~-g--~~~~---~~---~~~~~p~-----~~  133 (313)
T 1qyd_A           80 VISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLP-SEF-G--MDPD---IM---EHALQPG-----SI  133 (313)
T ss_dssp             EEECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEEC-SCC-S--SCTT---SC---CCCCSST-----TH
T ss_pred             EEECCccccch-----------hhHHHHHHHHHHHHhcCCCceEEe-cCC-c--CCcc---cc---ccCCCCC-----cc
Confidence            99999865421           25667889999999998 999996 532 1  1111   11   1111221     12


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHHHHHH
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQV  239 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~~  239 (331)
                      .| .+|..+|++++    +.+++++++||+.++|+......... .  .....+..+.   .++..++++|++|+|++++
T Consensus       134 ~y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~  205 (313)
T 1qyd_A          134 TF-IDKRKVRRAIE----AASIPYTYVSSNMFAGYFAGSLAQLD-G--HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTI  205 (313)
T ss_dssp             HH-HHHHHHHHHHH----HTTCCBCEEECCEEHHHHTTTSSCTT-C--CSSCCSSEECCBTTSCSEEEEECHHHHHHHHH
T ss_pred             hH-HHHHHHHHHHH----hcCCCeEEEEeceecccccccccccc-c--cccCCCCeEEEeCCCCceEEEEEHHHHHHHHH
Confidence            68 99999998886    67899999999998885432110000 0  0001122222   3457799999999999999


Q ss_pred             HhhcCCCCCc-eE-EEec-cccCHHHHHHHHHHhCC
Q 020110          240 LLFESPAASG-RY-LCTN-GIYQFGDFAERVSKLFP  272 (331)
Q Consensus       240 ~~l~~~~~~g-~~-~~~~-~~~s~~e~~~~i~~~~~  272 (331)
                      .++..+...| .| ++++ +.+|+.|+++.+.+.+|
T Consensus       206 ~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g  241 (313)
T 1qyd_A          206 KSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE  241 (313)
T ss_dssp             HHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             HHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcC
Confidence            9998765434 55 4444 57999999999999884

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=4.7e-27  Score=201.05  Aligned_cols=235  Identities=14%  Similarity=0.150  Sum_probs=155.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-C---CCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-L---PGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~---~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+........+ +   ..... ++.++.+|++|++++.++++    
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQ-NVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGG-GEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCC-ceeEEecccCCHHHHHHHHHHHHH
Confidence            357999999999999999999999999 99999997643322211 1   11112 68899999999999888876    


Q ss_pred             ---CccEEEEcccCCCCCC--------CCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccce-eccCCCCCC
Q 020110           80 ---GCKGVFHVASPCTLED--------PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISA-IVPNPGWKG  143 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~-~~~~~~~~~  143 (331)
                         ++|+|||+||......        ..+++...+++|+.++.++++++...    + +++|++||..+ +.+.+.   
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~---  158 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPD---  158 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTT---
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCC---
Confidence               7999999999754321        23345678999999999999987653    5 79999999754 332211   


Q ss_pred             ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC---hh---HHHHHHHH
Q 020110          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN---AS---CAVLQQLL  214 (331)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~---~~---~~~~~~~~  214 (331)
                                       ...|+.+|...+.+.+.++.+   +|+++++++|+.+.++.......   ..   ......+.
T Consensus       159 -----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
T 1spx_A          159 -----------------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMK  221 (278)
T ss_dssp             -----------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHH
T ss_pred             -----------------ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHH
Confidence                             137999999999999888755   58999999999999986432100   00   00011221


Q ss_pred             cCCCCccCcCCCCceeHHHHHHHHHHhhcCCC---CCc-eEEEec-cccCHHHHHHHHHHhC
Q 020110          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA---ASG-RYLCTN-GIYQFGDFAERVSKLF  271 (331)
Q Consensus       215 ~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~---~~g-~~~~~~-~~~s~~e~~~~i~~~~  271 (331)
                      ...      ....+++++|+|++++.++..+.   ..| .+++.+ ...++.|+++.+.+.+
T Consensus       222 ~~~------p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          222 ECV------PAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             HHC------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             hcC------CCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            111      12358899999999999886532   456 566654 5689999999888753

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.95  E-value=4e-26  Score=193.04  Aligned_cols=213  Identities=19%  Similarity=0.184  Sum_probs=161.0

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      |+..++|+||||||+|+||++++++|+++|+ +|++++|+.......         ++.++.+|++|++++.++++    
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---------~~~~~~~Dv~d~~~v~~~~~~~~~   92 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---------DIHTVAGDISKPETADRIVREGIE   92 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---------TEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---------ceEEEEccCCCHHHHHHHHHHHHH
Confidence            4445678999999999999999999999999 999999976543221         78899999999999888776    


Q ss_pred             ---CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                         ++|++||+||.....    ...+++...+++|+.++.++++++    ++.+.+++|++||..+..+.+..       
T Consensus        93 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------  165 (260)
T 3un1_A           93 RFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGM-------  165 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTC-------
T ss_pred             HCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCC-------
Confidence               689999999976532    123345778899999999999987    45567899999997442211111       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                 +...|+.+|...+.+.+.++.+.   |+++++++||.++++.....   .   ........      ..
T Consensus       166 -----------~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~---~~~~~~~~------p~  222 (260)
T 3un1_A          166 -----------PSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE---T---HSTLAGLH------PV  222 (260)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG---G---HHHHHTTS------TT
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH---H---HHHHhccC------CC
Confidence                       11379999999999999998776   89999999999999875321   1   11222221      23


Q ss_pred             CCceeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESPAASG-RYLCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~~~g-~~~~~~~  256 (331)
                      ..+.+++|+|++++.+.......| .+++.++
T Consensus       223 ~r~~~~~dva~av~~L~~~~~itG~~i~vdGG  254 (260)
T 3un1_A          223 GRMGEIRDVVDAVLYLEHAGFITGEILHVDGG  254 (260)
T ss_dssp             SSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHhcccCCCCCcEEEECCC
Confidence            567889999999999866666677 5666553

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.95  E-value=9.3e-28  Score=209.49  Aligned_cols=216  Identities=13%  Similarity=0.086  Sum_probs=157.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      ++||||||||+||++++++|+++|+ +|++++|++... ..+..+..  . +++++.+|+.|++++.++++++|+|||++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~l~~--~-~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a   87 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPNSSKTTLLDEFQS--L-GAIIVKGELDEHEKLVELMKKVDVVISAL   87 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTTCSCHHHHHHHHH--T-TCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCCCchhhHHHHhhc--C-CCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            5899999999999999999999999 999999987522 21111100  1 78899999999999999999999999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      +...               +.++.+++++|++.+ +++||+ |+.    +.      ..+|.++..|..     ..| .+
T Consensus        88 ~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~----g~------~~~~~~~~~p~~-----~~y-~s  135 (318)
T 2r6j_A           88 AFPQ---------------ILDQFKILEAIKVAGNIKRFLP-SDF----GV------EEDRINALPPFE-----ALI-ER  135 (318)
T ss_dssp             CGGG---------------STTHHHHHHHHHHHCCCCEEEC-SCC----SS------CTTTCCCCHHHH-----HHH-HH
T ss_pred             chhh---------------hHHHHHHHHHHHhcCCCCEEEe-ecc----cc------CcccccCCCCcc-----hhH-HH
Confidence            8532               235679999999998 999985 532    11      112333333321     268 99


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHHHHHHHhhcC
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      |..+|++++    +.+++++++||+.+++..       ...++.....+....   .++..++++|++|+|+++..++..
T Consensus       136 K~~~e~~~~----~~~~~~~~lr~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  204 (318)
T 2r6j_A          136 KRMIRRAIE----EANIPYTYVSANCFASYF-------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATD  204 (318)
T ss_dssp             HHHHHHHHH----HTTCCBEEEECCEEHHHH-------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHH----hcCCCeEEEEcceehhhh-------hhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcC
Confidence            999998886    578999999998877641       111111111222222   245679999999999999999987


Q ss_pred             CCCCc-eE-EEe-ccccCHHHHHHHHHHhCC
Q 020110          245 PAASG-RY-LCT-NGIYQFGDFAERVSKLFP  272 (331)
Q Consensus       245 ~~~~g-~~-~~~-~~~~s~~e~~~~i~~~~~  272 (331)
                      +...+ .| +++ ++.+|+.|+++.+.+.+|
T Consensus       205 ~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g  235 (318)
T 2r6j_A          205 PRALNRVVIYRPSTNIITQLELISRWEKKIG  235 (318)
T ss_dssp             GGGTTEEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             ccccCeEEEecCCCCccCHHHHHHHHHHHhC
Confidence            65434 45 444 467999999999999884

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.95  E-value=5.2e-27  Score=196.94  Aligned_cols=217  Identities=21%  Similarity=0.176  Sum_probs=158.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC---ccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---CKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~v   84 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+........+...    +++++.+|++|++++.+++++   +|+|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALGGIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcc----CCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence            457999999999999999999999999 99999997654333222111    567789999999999998864   7999


Q ss_pred             EEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           85 FHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        85 ih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      ||+|+.....    ...+++...+++|+.++.++++++...    + .++||++||..++.+.+.               
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------  145 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN---------------  145 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT---------------
T ss_pred             EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC---------------
Confidence            9999965431    122345678999999999999887553    4 578999999755432211               


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHH
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  232 (331)
                           ...|+.+|...|.+.+.++++   .+++++++||+.++|+...... ....++..+..+.      ..+++++++
T Consensus       146 -----~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~  213 (244)
T 1cyd_A          146 -----LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERH------PLRKFAEVE  213 (244)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHS------TTSSCBCHH
T ss_pred             -----cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccc-cCHHHHHHHHhcC------CccCCCCHH
Confidence                 137999999999999998866   5899999999999998532110 1122333333332      236899999


Q ss_pred             HHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          233 DVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       233 D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      |+|++++.++..+.  ..| .+.+.++
T Consensus       214 dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 1cyd_A          214 DVVNSILFLLSDRSASTSGGGILVDAG  240 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             HHHHHHHHHhCchhhcccCCEEEECCC
Confidence            99999999987542  345 4555543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=1.2e-27  Score=202.12  Aligned_cols=227  Identities=16%  Similarity=0.098  Sum_probs=156.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----CccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~v   84 (331)
                      ||+||||||+||||++++++|+++|+ +|++++|++.....             .+.+|+++++++.++++    ++|+|
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~~~~~d~v   66 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRCGGVLDGL   66 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHcCCCccEE
Confidence            57899999999999999999999999 99999997654211             15689999988888876    79999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCC-------CCCC
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDET-------SWTD  153 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~-------~~~~  153 (331)
                      ||+|+....   ..++...+++|+.++.++++++...    +.+++|++||..++++....  .+..|.       .+..
T Consensus        67 i~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--~~~~~~~~~~~~~~~~~  141 (255)
T 2dkn_A           67 VCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAE--LPMVEAMLAGDEARAIE  141 (255)
T ss_dssp             EECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGG--CHHHHHHHHTCHHHHHH
T ss_pred             EECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccc--cchhhhhcccchhhhhh
Confidence            999997542   3447889999999999999977654    56899999998665433211  111110       0000


Q ss_pred             hh-hhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHH-HHHHHHcCCCCccCcCCCCc
Q 020110          154 LE-YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCA-VLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       154 ~~-~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  228 (331)
                      .. ....+...|+.+|...|.+++.++++   .+++++++||+.++|+.....   ... .........   .+ ...++
T Consensus       142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~---~~~~~~~~~~~~~---~~-~~~~~  214 (255)
T 2dkn_A          142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQAS---KADPRYGESTRRF---VA-PLGRG  214 (255)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHH---HHCTTTHHHHHSC---CC-TTSSC
T ss_pred             hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhc---ccchhhHHHHHHH---HH-HhcCC
Confidence            00 00012247999999999999988765   699999999999999853110   000 000111100   02 34679


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCc-eEEEecc-ccCHH
Q 020110          229 VPVKDVAKAQVLLFESP--AASG-RYLCTNG-IYQFG  261 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~-~~s~~  261 (331)
                      ++++|+|++++.++..+  ...| .|+++++ ..+++
T Consensus       215 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  251 (255)
T 2dkn_A          215 SEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMR  251 (255)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHC
T ss_pred             CCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeee
Confidence            99999999999999765  3445 5777553 34543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.94  E-value=8.4e-27  Score=196.96  Aligned_cols=222  Identities=17%  Similarity=0.189  Sum_probs=161.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +.|+||||||+|+||++++++|+++|+ +|++++|+......+.+ +..... ++.++.+|++|++++.++++       
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            457999999999999999999999999 99999997644322211 111112 78899999999999888876       


Q ss_pred             CccEEEEcccCCCCCC---CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHVASPCTLED---PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      ++|+|||+|+......   ..+++...+++|+.++.++++++.    +.+.++||++||..++.+.+.            
T Consensus        88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------  155 (255)
T 1fmc_A           88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN------------  155 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT------------
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC------------
Confidence            7999999999765421   223347789999999999998874    446789999999755332211            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                              ...|+.+|...|.+.+.++.+.   +++++++||+.++++......  ......+...+.+      ...++
T Consensus       156 --------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~------~~~~~  219 (255)
T 1fmc_A          156 --------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTP------IRRLG  219 (255)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--CHHHHHHHHHTCS------SCSCB
T ss_pred             --------CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc--ChHHHHHHHhcCC------cccCC
Confidence                    1379999999999999887654   899999999999998543211  1233334444332      24578


Q ss_pred             eHHHHHHHHHHhhcCCC--CCc-eEEEec-cccC
Q 020110          230 PVKDVAKAQVLLFESPA--ASG-RYLCTN-GIYQ  259 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~--~~g-~~~~~~-~~~s  259 (331)
                      +++|+|+++..++....  ..| .|++++ ...|
T Consensus       220 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          220 QPQDIANAALFLCSPAASWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             CHHHHHHHHHHHhCCccccCCCcEEEECCceecc
Confidence            99999999999987542  345 677755 3444

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.94  E-value=2.4e-27  Score=205.77  Aligned_cols=220  Identities=14%  Similarity=0.108  Sum_probs=157.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC-------ccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-------DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      ||+|||||||||||++++++|++.|+ +|++++|++.       ....+..+..  . +++++.+|+.|++++.++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~--~-~v~~v~~D~~d~~~l~~~~~~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQS--L-GVILLEGDINDHETLVKAIKQV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHH--T-TCEEEECCTTCHHHHHHHHTTC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHh--C-CCEEEEeCCCCHHHHHHHHhCC
Confidence            67999999999999999999999999 9999999861       1111111100  1 7889999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhcc
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (331)
                      |+|||+++...               +.++.+++++|++.+ +++||+ |+.    +..      .+|..+..|..    
T Consensus        78 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~----g~~------~~~~~~~~p~~----  127 (307)
T 2gas_A           78 DIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-SEF----GLD------VDRHDAVEPVR----  127 (307)
T ss_dssp             SEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-SCC----SSC------TTSCCCCTTHH----
T ss_pred             CEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-ccc----ccC------cccccCCCcch----
Confidence            99999998632               235678999999998 999984 432    111      12222223321    


Q ss_pred             CcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHHHH
Q 020110          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKA  237 (331)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a  237 (331)
                       ..| .+|..+|++++    +.+++++++||+.++++.........    .....+..+.   .++..+++++++|+|++
T Consensus       128 -~~y-~sK~~~e~~~~----~~~i~~~~lrp~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  197 (307)
T 2gas_A          128 -QVF-EEKASIRRVIE----AEGVPYTYLCCHAFTGYFLRNLAQLD----ATDPPRDKVVILGDGNVKGAYVTEADVGTF  197 (307)
T ss_dssp             -HHH-HHHHHHHHHHH----HHTCCBEEEECCEETTTTGGGTTCTT----CSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred             -hHH-HHHHHHHHHHH----HcCCCeEEEEcceeeccccccccccc----cccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence             368 99999998876    56899999999999886432110000    0001111222   23467899999999999


Q ss_pred             HHHhhcCCCCCc-eE-EEec-cccCHHHHHHHHHHhCC
Q 020110          238 QVLLFESPAASG-RY-LCTN-GIYQFGDFAERVSKLFP  272 (331)
Q Consensus       238 ~~~~l~~~~~~g-~~-~~~~-~~~s~~e~~~~i~~~~~  272 (331)
                      ++.++..+...+ .| ++++ +.+|+.|+++.+.+.+|
T Consensus       198 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g  235 (307)
T 2gas_A          198 TIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIG  235 (307)
T ss_dssp             HHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             HHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhC
Confidence            999998765444 45 4444 57999999999999984

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.94  E-value=3e-27  Score=205.32  Aligned_cols=220  Identities=15%  Similarity=0.196  Sum_probs=157.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc---ch---hhcCCCCCCCcEEEEEccCCCchHHHHHhcCcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SH---LFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~---~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      ||+|+|||||||||++++++|++.|+ +|++++|+....   ..   +..+..  . +++++.+|+.|++++.++++++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~~~l~~--~-~v~~v~~D~~d~~~l~~~~~~~d   79 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKA--S-GANIVHGSIDDHASLVEAVKNVD   79 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHT--T-TCEEECCCTTCHHHHHHHHHTCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccccCHHHHHHHHHHHh--C-CCEEEEeccCCHHHHHHHHcCCC
Confidence            57899999999999999999999999 999999976432   11   111100  1 78999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccC
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (331)
                      +|||+++...               +.++.+++++|++.+ +++||+ |+.    +.      ..+|.++..|..     
T Consensus        80 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~----g~------~~~~~~~~~p~~-----  128 (308)
T 1qyc_A           80 VVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SEF----GN------DVDNVHAVEPAK-----  128 (308)
T ss_dssp             EEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SCC----SS------CTTSCCCCTTHH-----
T ss_pred             EEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-ccc----cc------CccccccCCcch-----
Confidence            9999998532               234678999999998 999985 542    11      112333323321     


Q ss_pred             cchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHHHHH
Q 020110          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQ  238 (331)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~  238 (331)
                      ..| .+|..+|++++    +.+++++++||+.++|+.........    .....+....   .++..++++|++|+|+++
T Consensus       129 ~~y-~sK~~~e~~~~----~~~~~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (308)
T 1qyc_A          129 SVF-EVKAKVRRAIE----AEGIPYTYVSSNCFAGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDIGTFT  199 (308)
T ss_dssp             HHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHHHHHH
T ss_pred             hHH-HHHHHHHHHHH----hcCCCeEEEEeceecccccccccccc----ccCCCCCceEEecCCCceEEEecHHHHHHHH
Confidence            268 99999998886    56899999999999886432111000    0001112222   245779999999999999


Q ss_pred             HHhhcCCCCCc-eEE-Eec-cccCHHHHHHHHHHhCC
Q 020110          239 VLLFESPAASG-RYL-CTN-GIYQFGDFAERVSKLFP  272 (331)
Q Consensus       239 ~~~l~~~~~~g-~~~-~~~-~~~s~~e~~~~i~~~~~  272 (331)
                      +.++..+...+ .|+ +++ +.+|+.|+++.+.+.+|
T Consensus       200 ~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g  236 (308)
T 1qyc_A          200 IKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID  236 (308)
T ss_dssp             HTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTT
T ss_pred             HHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhC
Confidence            99998765444 554 443 57999999999999984

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.94  E-value=1.8e-27  Score=207.88  Aligned_cols=218  Identities=11%  Similarity=0.078  Sum_probs=157.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC-Cc-----cchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SD-----SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      +||+|||||||||||++++++|++.|+ +|++++|++ ..     ...+..+..  . +++++.+|+.|++++.++++++
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~l~~~~~--~-~v~~v~~D~~d~~~l~~a~~~~   78 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSH-PTFIYARPLTPDSTPSSVQLREEFRS--M-GVTIIEGEMEEHEKMVSVLKQV   78 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECCCCTTCCHHHHHHHHHHHH--T-TCEEEECCTTCHHHHHHHHTTC
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCC-cEEEEECCcccccChHHHHHHHHhhc--C-CcEEEEecCCCHHHHHHHHcCC
Confidence            367899999999999999999999999 999999986 21     111111100  1 7899999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhcc
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (331)
                      |+|||+++...               +.++.+++++|++.+ +++||+ |+.    +.      ..+|.++..|..    
T Consensus        79 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~----g~------~~~~~~~~~p~~----  128 (321)
T 3c1o_A           79 DIVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-SDF----GC------EEDRIKPLPPFE----  128 (321)
T ss_dssp             SEEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-SCC----SS------CGGGCCCCHHHH----
T ss_pred             CEEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-ccc----cc------CccccccCCCcc----
Confidence            99999998532               335679999999998 999984 432    11      112333333311    


Q ss_pred             CcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHH---HHHcCCCCc---cCcCCCCceeHHHH
Q 020110          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQ---QLLQGSKDT---QEYHWLGAVPVKDV  234 (331)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~v~v~D~  234 (331)
                       ..| .+|..+|++++    +.+++++++||+.++++..       ..+..   ....+..+.   .++..++++|++|+
T Consensus       129 -~~y-~sK~~~e~~~~----~~~~~~~~lrp~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (321)
T 3c1o_A          129 -SVL-EKKRIIRRAIE----AAALPYTYVSANCFGAYFV-------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDI  195 (321)
T ss_dssp             -HHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHH-------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHH
T ss_pred             -hHH-HHHHHHHHHHH----HcCCCeEEEEeceeccccc-------cccccccccccccCceEEecCCCcceeEeeHHHH
Confidence             369 99999998886    5689999999998887521       11111   001222222   24577899999999


Q ss_pred             HHHHHHhhcCCCCCc-eEEE-e-ccccCHHHHHHHHHHhCC
Q 020110          235 AKAQVLLFESPAASG-RYLC-T-NGIYQFGDFAERVSKLFP  272 (331)
Q Consensus       235 a~a~~~~l~~~~~~g-~~~~-~-~~~~s~~e~~~~i~~~~~  272 (331)
                      |+++..++..+...| .|++ + ++.+|+.|+++.+.+.+|
T Consensus       196 a~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g  236 (321)
T 3c1o_A          196 AKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSG  236 (321)
T ss_dssp             HHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcC
Confidence            999999998765445 4544 4 467999999999999884

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.94  E-value=1.4e-26  Score=200.48  Aligned_cols=237  Identities=13%  Similarity=0.018  Sum_probs=165.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+......... +....+.++.++.+|++|++++.++++       
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999 99999997644322211 100001178999999999998887775       


Q ss_pred             CccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHh-----CCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      ++|+|||+||....    ....+++...+++|+.++.++++++..     .+.+++|++||..+..+.+..         
T Consensus       104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------  174 (302)
T 1w6u_A          104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV---------  174 (302)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTC---------
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCc---------
Confidence            35999999996543    122334577899999999999887743     345789999997654432221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+   +|++++++|||.++++...............+..+.+      ...
T Consensus       175 -----------~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p------~~~  237 (302)
T 1w6u_A          175 -----------VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP------CGR  237 (302)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT------TSS
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC------cCC
Confidence                       37999999999999998877   7899999999999998422111111011122222221      235


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCc-eEEEec-cccCHHHHHHHHHHhC
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCTN-GIYQFGDFAERVSKLF  271 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~-~~~s~~e~~~~i~~~~  271 (331)
                      +++++|+|++++.++....  ..| .+++.+ ...++.++++.+.+..
T Consensus       238 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~  285 (302)
T 1w6u_A          238 LGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVT  285 (302)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCC
T ss_pred             CCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhc
Confidence            7899999999999886542  356 566655 4578888877777655

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.94  E-value=2.3e-26  Score=194.83  Aligned_cols=222  Identities=17%  Similarity=0.163  Sum_probs=159.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+........+ +..... ++.++.+|++|++++.++++       
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNTESVQNAVRSVHEQEG   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999 99999997643322211 100112 78999999999998888775       


Q ss_pred             CccEEEEcccCCC-CCC----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCT-LED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      ++|+|||+||... ...    ..+++...+++|+.++.++++++..    .+.+++|++||..+..+.+.          
T Consensus        90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------  159 (260)
T 3awd_A           90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP----------  159 (260)
T ss_dssp             CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS----------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC----------
Confidence            6899999999754 211    1223467899999999999988754    35679999999755332211          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                        .+      ...|+.+|...|.+.+.++++   ++++++++||+.++++...... ........+..+.+      ...
T Consensus       160 --~~------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~~~  224 (260)
T 3awd_A          160 --QQ------QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGM-EKPELYDAWIAGTP------MGR  224 (260)
T ss_dssp             --SC------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHH-TCHHHHHHHHHTCT------TSS
T ss_pred             --CC------ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhccc-CChHHHHHHHhcCC------cCC
Confidence              01      137999999999999998877   7899999999999998643110 01122333333322      245


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +++++|+|+++..++...  ...| .+++.++
T Consensus       225 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  256 (260)
T 3awd_A          225 VGQPDEVASVVQFLASDAASLMTGAIVNVDAG  256 (260)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHhCchhccCCCcEEEECCc
Confidence            889999999999988653  3356 5666654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.94  E-value=6.4e-26  Score=190.29  Aligned_cols=218  Identities=18%  Similarity=0.132  Sum_probs=157.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---CccE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKG   83 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   83 (331)
                      .++|+||||||+|+||++++++|+++|+ +|++++|+......+.+...    +++++.+|++|++++.++++   ++|+
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~id~   79 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHHHcCCCCE
Confidence            3467999999999999999999999999 99999987654333222111    46778999999999999886   4799


Q ss_pred             EEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           84 VFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        84 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      |||+||.....    ...+.+...+++|+.++.++++++...    + .+++|++||..+..+.+.              
T Consensus        80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  145 (244)
T 3d3w_A           80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN--------------  145 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT--------------
T ss_pred             EEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCC--------------
Confidence            99999975431    122345778999999999998887543    4 578999999754332111              


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                            ...|+.+|...|.+.+.++++   .+++++++||+.++++....... .......+..+.      ....++++
T Consensus       146 ------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~  212 (244)
T 3d3w_A          146 ------HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS-DPHKAKTMLNRI------PLGKFAEV  212 (244)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSC-STTHHHHHHHTC------TTCSCBCH
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhcc-ChHHHHHHHhhC------CCCCCcCH
Confidence                  137999999999999988866   58999999999999986321000 001112222222      23578999


Q ss_pred             HHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          232 KDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       232 ~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +|+|++++.++...  ...| .|+++++
T Consensus       213 ~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          213 EHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            99999999998754  2356 5666553

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.94  E-value=2.3e-26  Score=194.60  Aligned_cols=220  Identities=16%  Similarity=0.156  Sum_probs=158.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC-CCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~-~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .++|+||||||+|+||++++++|+++|+ +|++++|+ +.....+.+ +..... ++.++.+|++|++++.++++     
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGG-DAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3467999999999999999999999999 99999998 544332211 111112 78999999999999888876     


Q ss_pred             --CccEEEEcccC-CCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----C--C---CEEEEeCccceec-cCCCCC
Q 020110           80 --GCKGVFHVASP-CTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G--V---RRVVVTSSISAIV-PNPGWK  142 (331)
Q Consensus        80 --~~d~vih~a~~-~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~---~~~v~~SS~~~~~-~~~~~~  142 (331)
                        ++|+|||+||. ....    ...+.....+++|+.++.++++++...    +  .   .++|++||..+.. +.+.  
T Consensus        83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  160 (258)
T 3afn_B           83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG--  160 (258)
T ss_dssp             HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT--
T ss_pred             cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC--
Confidence              79999999996 3221    112234668899999999998876422    2  2   6899999975433 2111  


Q ss_pred             CccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCC
Q 020110          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (331)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (331)
                                        ...|+.+|...|.+.+.++.+.   +++++++||+.++++.....   .......+..+.+ 
T Consensus       161 ------------------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~-  218 (258)
T 3afn_B          161 ------------------AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---TQDVRDRISNGIP-  218 (258)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---CHHHHHHHHTTCT-
T ss_pred             ------------------chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---CHHHHHHHhccCC-
Confidence                              1379999999999999887654   89999999999999865331   1233333433322 


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC---CCCc-eEEEeccc
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP---AASG-RYLCTNGI  257 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~---~~~g-~~~~~~~~  257 (331)
                           ...+++++|+|++++.++...   ...| .|+++++.
T Consensus       219 -----~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          219 -----MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             -----TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             -----CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence                 356899999999999988754   2356 56776653

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.94  E-value=6.3e-26  Score=191.94  Aligned_cols=225  Identities=16%  Similarity=0.134  Sum_probs=161.4

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      |...++|++|||||+|+||++++++|+++|+ +|++++|+...........  .. ++.++.+|++|++++.++++    
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEI--GP-AAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--CT-TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--CC-CceEEEeeCCCHHHHHHHHHHHHH
Confidence            4445568999999999999999999999999 9999998765433322211  11 68899999999999888776    


Q ss_pred             ---CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                         ++|+|||+||.....    ...+++...+++|+.++.++++++...    + ..++|++||..++++.+..      
T Consensus        79 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  152 (259)
T 4e6p_A           79 HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALV------  152 (259)
T ss_dssp             HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCC------
Confidence               789999999975432    123445778899999999999987543    2 4589999998665443321      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc----
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT----  220 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~----  220 (331)
                                    ..|+.+|...+.+.+.++.+.   |+++++++||.++++....    ....+..........    
T Consensus       153 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~  214 (259)
T 4e6p_A          153 --------------AIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG----VDALFARYENRPRGEKKRL  214 (259)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH----HHHHHHHHHTCCTTHHHHH
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh----hhhhhhhhccCChHHHHHH
Confidence                          379999999999999988664   8999999999999986321    111111111111000    


Q ss_pred             c--CcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          221 Q--EYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       221 ~--~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      .  ......+.+++|+|+++++++...  ...| .+++.++
T Consensus       215 ~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG  255 (259)
T 4e6p_A          215 VGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGG  255 (259)
T ss_dssp             HHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             HhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcC
Confidence            1  114577999999999999888643  2346 5666553

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.94  E-value=1.3e-25  Score=189.17  Aligned_cols=220  Identities=20%  Similarity=0.179  Sum_probs=157.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +|++|||||+|+||++++++|+++|+ +|++++|+......... +....+.++.++.+|++|++++.++++       +
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999 99999997644332211 101111278999999999999888876       7


Q ss_pred             ccEEEEcccCCCCCC-------CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           81 CKGVFHVASPCTLED-------PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        81 ~d~vih~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                      +|+|||+||......       ..+++...+++|+.++.++++++.    +.+.+++|++||..++++.+..        
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------  152 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGR--------  152 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC--------
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCc--------
Confidence            899999999754321       123457788999999987777653    3467899999997654432221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                  ..|+.+|...+.+.+.++.+.   +++++++||+.++++....... ...+...+..+.+      ..
T Consensus       153 ------------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~  213 (250)
T 2cfc_A          153 ------------SAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD-QPELRDQVLARIP------QK  213 (250)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT-SHHHHHHHHTTCT------TC
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC-CHHHHHHHHhcCC------CC
Confidence                        379999999999999887664   8999999999999986432000 1122223333221      24


Q ss_pred             CceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          227 GAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      .+.+++|+|++++.++..+.  ..| .+++.++
T Consensus       214 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          214 EIGTAAQVADAVMFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             SCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence            57899999999999987653  346 4566553

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.94  E-value=3.4e-25  Score=187.26  Aligned_cols=217  Identities=20%  Similarity=0.193  Sum_probs=154.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||+|+||++++++|+++|+ +|++++|+...........   +.++.++.+|++|++++.++++       
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEFG   80 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4567999999999999999999999999 9999999876544332221   1278899999999999888776       


Q ss_pred             CccEEEEcccCCCCCC--------CCCchhhhhHHHHHHHHHHHHHHHhC----------CCCEEEEeCccceeccCCCC
Q 020110           80 GCKGVFHVASPCTLED--------PVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVPNPGW  141 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~SS~~~~~~~~~~  141 (331)
                      ++|++||+||......        ..+++...+++|+.++.++++++...          +..++|++||..++.+.+..
T Consensus        81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~  160 (257)
T 3tpc_A           81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQ  160 (257)
T ss_dssp             CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTC
T ss_pred             CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCC
Confidence            6899999999764321        12445778999999999999988653          34579999998666544332


Q ss_pred             CCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCC
Q 020110          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (331)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (331)
                                          ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.....   .......+.... 
T Consensus       161 --------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~-  216 (257)
T 3tpc_A          161 --------------------AAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM---PQDVQDALAASV-  216 (257)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------CCS-
T ss_pred             --------------------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC---CHHHHHHHHhcC-
Confidence                                37999999999999888866   689999999999999864321   111111111111 


Q ss_pred             CccCcCC-CCceeHHHHHHHHHHhhcCCCCCce-EEEecc
Q 020110          219 DTQEYHW-LGAVPVKDVAKAQVLLFESPAASGR-YLCTNG  256 (331)
Q Consensus       219 ~~~~~~~-~~~v~v~D~a~a~~~~l~~~~~~g~-~~~~~~  256 (331)
                           .. ..+.+++|+|+++..++......|. +.+.++
T Consensus       217 -----p~~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG  251 (257)
T 3tpc_A          217 -----PFPPRLGRAEEYAALVKHICENTMLNGEVIRLDGA  251 (257)
T ss_dssp             -----SSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             -----CCCCCCCCHHHHHHHHHHHcccCCcCCcEEEECCC
Confidence                 12 4578999999999999987666774 555543

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.94  E-value=4.4e-25  Score=189.95  Aligned_cols=226  Identities=17%  Similarity=0.094  Sum_probs=161.5

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---Ccc
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCK   82 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d   82 (331)
                      +.+.|+||||||+|+||++++++|+++|+ +|++++|+........+..  .. ++.++.+|++|++++.++++   ++|
T Consensus        13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~Dl~d~~~v~~~~~~~~~iD   88 (291)
T 3rd5_A           13 SFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTM--AG-QVEVRELDLQDLSSVRRFADGVSGAD   88 (291)
T ss_dssp             CCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTS--SS-EEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh--cC-CeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence            44568999999999999999999999999 9999999865544433322  12 79999999999999999887   569


Q ss_pred             EEEEcccCCCCC--CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCcccc-CCCCCChhhhhc
Q 020110           83 GVFHVASPCTLE--DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFD-ETSWTDLEYCKS  159 (331)
Q Consensus        83 ~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~-E~~~~~~~~~~~  159 (331)
                      ++||+||.....  ...+++...+++|+.++.++++++.....+++|++||..++.+....  .... +..+..+.    
T Consensus        89 ~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~--~~~~~~~~~~~~~----  162 (291)
T 3rd5_A           89 VLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINL--EDLNWRSRRYSPW----  162 (291)
T ss_dssp             EEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCS--SCTTCSSSCCCHH----
T ss_pred             EEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCc--ccccccccCCCCc----
Confidence            999999976532  23456688999999999999999988877799999998665543332  1122 22222232    


Q ss_pred             cCcchhHHHHHHHHHHHHHHHHc---C--CeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHH
Q 020110          160 RKKWYPVSKTLAEKAAWEFAEKH---G--VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (331)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  234 (331)
                        ..|+.+|...+.+.+.++++.   +  +++++++||.+.++.........   ...+ ...+     ..+-..+++|+
T Consensus       163 --~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~---~~~~-~~~~-----~~~~~~~~~~~  231 (291)
T 3rd5_A          163 --LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL---GDAL-MSAA-----TRVVATDADFG  231 (291)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------------CHHHHHH
T ss_pred             --chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH---HHHH-HHHH-----HHHHhCCHHHH
Confidence              379999999999998887654   4  99999999999887643211100   0000 0000     11223468999


Q ss_pred             HHHHHHhhcCCCCCceEE
Q 020110          235 AKAQVLLFESPAASGRYL  252 (331)
Q Consensus       235 a~a~~~~l~~~~~~g~~~  252 (331)
                      |++++.++..+...|.|+
T Consensus       232 A~~~~~l~~~~~~~G~~~  249 (291)
T 3rd5_A          232 ARQTLYAASQDLPGDSFV  249 (291)
T ss_dssp             HHHHHHHHHSCCCTTCEE
T ss_pred             HHHHHHHHcCCCCCCcee
Confidence            999999998876777653

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=2.8e-25  Score=183.53  Aligned_cols=189  Identities=16%  Similarity=0.101  Sum_probs=140.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHH-HCCCCEEEEEecCCC-ccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~-~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ||+||||||+|+||++++++|+ +.|+ +|++++|++. ....+....   . ++.++.+|++|++++.++++++|+|||
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~D~~d~~~~~~~~~~~d~vv~   79 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDH---E-RVTVIEGSFQNPGXLEQAVTNAEVVFV   79 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTS---T-TEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCC---C-ceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence            4569999999999999999999 8999 9999999866 444332111   1 899999999999999999999999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc-chh
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK-WYP  165 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~y~  165 (331)
                      +|+..               |+. +.++++++++.++++||++||..++.+.+.    +..+      .. ..... .|+
T Consensus        80 ~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~----~~~~------~~-~~~~~~~y~  132 (221)
T 3r6d_A           80 GAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPV----ALEK------WT-FDNLPISYV  132 (221)
T ss_dssp             SCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCH----HHHH------HH-HHTSCHHHH
T ss_pred             cCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCc----cccc------cc-ccccccHHH
Confidence            99852               444 889999999999999999999754322111    0100      01 11122 799


Q ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc-CCCCceeHHHHHHHHHHhh--
Q 020110          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY-HWLGAVPVKDVAKAQVLLF--  242 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~D~a~a~~~~l--  242 (331)
                      .+|...|..++    +.+++++++||+.++++.........        .     .+. ....+++.+|+|++++.++  
T Consensus       133 ~~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~~~~--------~-----~~~~~~~~~~~~~dvA~~~~~l~~~  195 (221)
T 3r6d_A          133 QGERQARNVLR----ESNLNYTILRLTWLYNDPEXTDYELI--------P-----EGAQFNDAQVSREAVVKAIFDILHA  195 (221)
T ss_dssp             HHHHHHHHHHH----HSCSEEEEEEECEEECCTTCCCCEEE--------C-----TTSCCCCCEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHH----hCCCCEEEEechhhcCCCCCcceeec--------c-----CCccCCCceeeHHHHHHHHHHHHHh
Confidence            99999998886    67999999999999998322111100        0     011 1234899999999999999  


Q ss_pred             cCCC
Q 020110          243 ESPA  246 (331)
Q Consensus       243 ~~~~  246 (331)
                      ..+.
T Consensus       196 ~~~~  199 (221)
T 3r6d_A          196 ADET  199 (221)
T ss_dssp             SCCG
T ss_pred             cChh
Confidence            6654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.94  E-value=5.3e-25  Score=183.69  Aligned_cols=198  Identities=18%  Similarity=0.153  Sum_probs=137.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .||+||||||||+||++++++|+++| + +|++++|++.....+..     . +++++.+|++|++++.++++++|+|||
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~-----~-~~~~~~~Dl~d~~~~~~~~~~~D~vv~   94 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYP-----T-NSQIIMGDVLNHAALKQAMQGQDIVYA   94 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCC-----T-TEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhccccc-----C-CcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence            36789999999999999999999999 8 99999998765433222     1 799999999999999999999999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +++...       .       ...+.++++++++.++++||++||..++...+.. ..+..|....          .+..
T Consensus        95 ~a~~~~-------~-------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~-~~~~~~~~~~----------~~~~  149 (236)
T 3qvo_A           95 NLTGED-------L-------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGK-FVEWNNAVIG----------EPLK  149 (236)
T ss_dssp             ECCSTT-------H-------HHHHHHHHHHHHHTTCCEEEEECCCCC-----------------C----------GGGH
T ss_pred             cCCCCc-------h-------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcc-cccchhhccc----------chHH
Confidence            997521       1       1346689999999999999999998554332221 1122222221          2333


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc-CCCCceeHHHHHHHHHHhhcCC
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY-HWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      .+..+|+.+.    ..+++++++||+.++++..... ..             ...+. ....+++++|+|++++.++..+
T Consensus       150 ~~~~~~~~l~----~~gi~~~~vrPg~i~~~~~~~~-~~-------------~~~~~~~~~~~i~~~DvA~~i~~ll~~~  211 (236)
T 3qvo_A          150 PFRRAADAIE----ASGLEYTILRPAWLTDEDIIDY-EL-------------TSRNEPFKGTIVSRKSVAALITDIIDKP  211 (236)
T ss_dssp             HHHHHHHHHH----TSCSEEEEEEECEEECCSCCCC-EE-------------ECTTSCCSCSEEEHHHHHHHHHHHHHST
T ss_pred             HHHHHHHHHH----HCCCCEEEEeCCcccCCCCcce-EE-------------eccCCCCCCcEECHHHHHHHHHHHHcCc
Confidence            3444555553    7899999999999999753221 00             00011 1246899999999999999887


Q ss_pred             C-CCc-eEEEec
Q 020110          246 A-ASG-RYLCTN  255 (331)
Q Consensus       246 ~-~~g-~~~~~~  255 (331)
                      . ..| .|++++
T Consensus       212 ~~~~g~~~~i~~  223 (236)
T 3qvo_A          212 EKHIGENIGINQ  223 (236)
T ss_dssp             TTTTTEEEEEEC
T ss_pred             ccccCeeEEecC
Confidence            6 334 676554

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.94  E-value=1.8e-26  Score=188.76  Aligned_cols=193  Identities=19%  Similarity=0.143  Sum_probs=148.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---CccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vih   86 (331)
                      |+||||||+|+||++++++|+++   +|++++|++.....+.....    . .++.+|++|++++.++++   ++|+|||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~id~vi~   72 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREVG----A-RALPADLADELEAKALLEEAGPLDLLVH   72 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHHT----C-EECCCCTTSHHHHHHHHHHHCSEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhcc----C-cEEEeeCCCHHHHHHHHHhcCCCCEEEE
Confidence            48999999999999999999987   78889887644333222111    2 788899999999999887   8999999


Q ss_pred             cccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           87 VASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        87 ~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      +||.....    ...+++...+++|+.++.++++++++.+.++||++||..++.+.+.                    ..
T Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~--------------------~~  132 (207)
T 2yut_A           73 AVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPG--------------------FA  132 (207)
T ss_dssp             CCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTT--------------------BH
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC--------------------cc
Confidence            99975432    2345567889999999999999997667789999999755433221                    13


Q ss_pred             chhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHH
Q 020110          163 WYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQV  239 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~  239 (331)
                      .|+.+|...|.+.+.++++   .|++++++||+.++++....             .      +...+++++++|+|++++
T Consensus       133 ~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~-------------~------~~~~~~~~~~~dva~~~~  193 (207)
T 2yut_A          133 AYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP-------------L------GGPPKGALSPEEAARKVL  193 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG-------------G------TSCCTTCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc-------------c------CCCCCCCCCHHHHHHHHH
Confidence            7999999999999988766   69999999999999875210             1      123478999999999999


Q ss_pred             HhhcCCCCCc
Q 020110          240 LLFESPAASG  249 (331)
Q Consensus       240 ~~l~~~~~~g  249 (331)
                      .++..+....
T Consensus       194 ~~~~~~~~~~  203 (207)
T 2yut_A          194 EGLFREPVPA  203 (207)
T ss_dssp             HHHC--CCCS
T ss_pred             HHHhCCCCcc
Confidence            9998765443

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.94  E-value=6.5e-26  Score=192.72  Aligned_cols=219  Identities=15%  Similarity=0.124  Sum_probs=142.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHh--------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAV--------   78 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~--------   78 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+......... +..... ++.++.+|+++++++.+++        
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   90 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMFG   90 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            457999999999999999999999999 99999987543322211 111111 6889999999998888777        


Q ss_pred             cCccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           79 EGCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        79 ~~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .++|+|||+||.....    ...+++...+++|+.++.++++++    ++.+.+++|++||..++.+.+.          
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------  160 (266)
T 1xq1_A           91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV----------  160 (266)
T ss_dssp             TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCC----------
Confidence            4689999999975432    123345678999999999999988    4556789999999755443221          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                ...|+.+|...+.+.+.++.+.   +++++++||+.++++......  ...+...+....      ....
T Consensus       161 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~------~~~~  222 (266)
T 1xq1_A          161 ----------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRK------PLGR  222 (266)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHHHHHHhcC------CCCC
Confidence                      1379999999999999887664   899999999999998643211  001111111111      1235


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +++++|+|+++..++...  ...| .+++.++
T Consensus       223 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  254 (266)
T 1xq1_A          223 FGEPEEVSSLVAFLCMPAASYITGQTICVDGG  254 (266)
T ss_dssp             -CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred             CcCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence            789999999999888643  2345 4555443

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.94  E-value=9.1e-26  Score=191.60  Aligned_cols=219  Identities=23%  Similarity=0.202  Sum_probs=155.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCC-------CcEEEEEccCCCchHHHHHhcC
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGD-------ANLRVFEADVLDSGAVSRAVEG   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~   80 (331)
                      +.|+||||||+|+||++++++|+++|+ +|++++|+......+.+.....+       .++.++.+|++|++++.+++++
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            357899999999999999999999999 99999997654333322111110       2688999999999988877764


Q ss_pred             -------c-cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCC
Q 020110           81 -------C-KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKG  143 (331)
Q Consensus        81 -------~-d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~  143 (331)
                             + |+|||+||.....    ...+++...+++|+.++.++++++...    + .++||++||..+.++.+..  
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--  162 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ--  162 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTB--
T ss_pred             HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCC--
Confidence                   3 9999999975431    123345778999999999999987654    3 4689999997665543221  


Q ss_pred             ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc
Q 020110          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (331)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (331)
                                        ..|+.+|...+.+.+.++.+   .+++++++||+.++++.....   .......+..+    
T Consensus       163 ------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~----  217 (264)
T 2pd6_A          163 ------------------TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV---PQKVVDKITEM----  217 (264)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGG----
T ss_pred             ------------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc---CHHHHHHHHHh----
Confidence                              37999999999999988766   689999999999999864321   11111111111    


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                        .....+++++|+|++++.++...  ...| .+.++++
T Consensus       218 --~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  254 (264)
T 2pd6_A          218 --IPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG  254 (264)
T ss_dssp             --CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence              12245789999999999988753  2445 4566554

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.94  E-value=1e-24  Score=185.63  Aligned_cols=220  Identities=20%  Similarity=0.149  Sum_probs=163.8

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ..++|++|||||+|+||++++++|+++|+ +|++++|+...........  .. ++.++.+|++|++++.++++      
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASV--GR-GAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHH--CT-TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh--CC-CeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34568999999999999999999999999 9999999876544332211  11 78899999999999888876      


Q ss_pred             -CccEEEEcccCCCC------CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 -GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 -~~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                       ++|++||+||....      +...+.+...+++|+.++.++++++    ++.+..++|++||..+..+.+..       
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------  156 (271)
T 3tzq_B           84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMS-------  156 (271)
T ss_dssp             SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSC-------
T ss_pred             CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCC-------
Confidence             68999999997632      1123345778999999999999988    56667799999998665433221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                   ..|+.+|...+.+.+.++.+   +|+++++++||.++++......  .......+....+      .
T Consensus       157 -------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~------~  215 (271)
T 3tzq_B          157 -------------TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL--PQPIVDIFATHHL------A  215 (271)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHHHHHTTST------T
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC--CHHHHHHHHhcCC------C
Confidence                         37999999999999998877   6899999999999998754221  1122233322221      2


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNGI  257 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~~  257 (331)
                      ..+..++|+|+++++++....  ..| .+++.++.
T Consensus       216 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          216 GRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence            447789999999999887542  456 45665553

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.93  E-value=2e-26  Score=197.29  Aligned_cols=239  Identities=22%  Similarity=0.210  Sum_probs=170.3

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CC--CCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LP--GAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~--~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      ..++|++|||||+|+||++++++|+++|+ +|++++|+........+ +.  .....++.++.+|++|++++.++++   
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            34568999999999999999999999999 99999987654332221 11  1111168899999999998887775   


Q ss_pred             ----CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccc
Q 020110           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                          ++|++||+||....     +...+++...+++|+.++.++++++...    +..+||++||..++.+.+..     
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  161 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWF-----  161 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTC-----
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCC-----
Confidence                57999999997332     1223345778999999999999977543    34589999998665433221     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                     ..|+.+|...+.+.+.++.+.   ++++++++||.+.++...... ........+....      
T Consensus       162 ---------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~------  219 (281)
T 3svt_A          162 ---------------GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAIT-ESAELSSDYAMCT------  219 (281)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHHHC------
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcc-cCHHHHHHHHhcC------
Confidence                           379999999999999888664   699999999999988542100 0112222222222      


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEec-cccC-HHHHHHHHHHhCC
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN-GIYQ-FGDFAERVSKLFP  272 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~-~~~s-~~e~~~~i~~~~~  272 (331)
                      ....+.+++|+|+++++++....  ..| .+++.+ ...+ ..++++.+.+.++
T Consensus       220 p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~  273 (281)
T 3svt_A          220 PLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFG  273 (281)
T ss_dssp             SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHC
T ss_pred             CCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccC
Confidence            23457789999999999887543  356 566654 4444 6788888888774

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.93  E-value=2.3e-25  Score=186.97  Aligned_cols=218  Identities=19%  Similarity=0.200  Sum_probs=160.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +|++|||||+|+||++++++|+++|+ +|++..|+... .....+.....+.++.++.+|++|++++.++++       +
T Consensus         4 ~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            4 TKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             SCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 99888775422 222111100011278899999999999888776       6


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|++||+||......    ..+++...+++|+.++.++++++    ++.+..++|++||..+.++.+..           
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  151 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQ-----------  151 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC-----------
Confidence            899999999765322    23344678999999999999988    44566799999998666554332           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.   .+|+++++++||.+.++.....   .......+..+.+      ...+.
T Consensus       152 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~r~~  213 (246)
T 3osu_A          152 ---------ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIP------LARFG  213 (246)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS---CHHHHHHHHTTCT------TCSCB
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc---CHHHHHHHHhcCC------CCCCc
Confidence                     3799999999999988876   4589999999999999875432   2233344444332      34578


Q ss_pred             eHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          230 PVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      +++|+|+++++++....  ..| .++++++
T Consensus       214 ~~~dva~~v~~l~s~~~~~itG~~i~vdgG  243 (246)
T 3osu_A          214 QDTDIANTVAFLASDKAKYITGQTIHVNGG  243 (246)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            89999999999887543  346 5666553

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.93  E-value=3.2e-25  Score=187.84  Aligned_cols=223  Identities=18%  Similarity=0.162  Sum_probs=162.2

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      |...+.|++|||||+|+||++++++|+++|+ +|++++|+........ ++......++.++.+|++|++++.++++   
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            4445578999999999999999999999999 9999999765433322 1111111278999999999998887775   


Q ss_pred             ----CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCcccee-ccCCCCCCccc
Q 020110           80 ----GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAI-VPNPGWKGKVF  146 (331)
Q Consensus        80 ----~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~-~~~~~~~~~~~  146 (331)
                          ++|++||+||......    ..+++...+++|+.++.++++++...    +..++|++||..+. .+.+.      
T Consensus        84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------  157 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPG------  157 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTT------
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCC------
Confidence                6899999999765322    23344677999999999998887554    67899999997543 22221      


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                    ...|+.+|...+.+.+.++.+   +|+++++++||.++++.....   .......+....+     
T Consensus       158 --------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p-----  215 (262)
T 3pk0_A          158 --------------WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---GEEYIASMARSIP-----  215 (262)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---CHHHHHHHHTTST-----
T ss_pred             --------------ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---CHHHHHHHHhcCC-----
Confidence                          137999999999999998877   689999999999998853221   1122333333322     


Q ss_pred             CCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                       ...+.+++|+|+++.+++...  ...| .+++.++
T Consensus       216 -~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG  250 (262)
T 3pk0_A          216 -AGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGG  250 (262)
T ss_dssp             -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence             234788999999999988654  2456 4566553

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.93  E-value=2.6e-25  Score=189.36  Aligned_cols=222  Identities=15%  Similarity=0.103  Sum_probs=160.1

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ..++|++|||||+|+||++++++|+++|+ +|++++|+........++..... ++.++.+|++|.+++.++.+      
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGG-SAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTC-EEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            44568999999999999999999999999 99999876433222222222222 78999999999988876653      


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|++||+||......    ..+++...+++|+.++.++++++    ++.+..++|++||..++.+.+..          
T Consensus       106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~----------  175 (273)
T 3uf0_A          106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNV----------  175 (273)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSC----------
T ss_pred             CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCC----------
Confidence            6899999999765422    23345778999999999999977    33466799999998665443321          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++.+   +|+++++++||.+.++..... .........+....      ....+
T Consensus       176 ----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~------p~~r~  238 (273)
T 3uf0_A          176 ----------AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL-RADDERAAEITARI------PAGRW  238 (273)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HTSHHHHHHHHHHS------TTSSC
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc-ccCHHHHHHHHhcC------CCCCC
Confidence                      37999999999999998876   689999999999998753210 00111222222222      23457


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          229 VPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      .+++|+|+++++++...  ...| .+++.++
T Consensus       239 ~~pedva~~v~~L~s~~a~~itG~~i~vdGG  269 (273)
T 3uf0_A          239 ATPEDMVGPAVFLASDAASYVHGQVLAVDGG  269 (273)
T ss_dssp             BCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence            88999999999988753  3456 4566543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.93  E-value=3.4e-25  Score=186.17  Aligned_cols=218  Identities=17%  Similarity=0.115  Sum_probs=147.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEE-ecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|+||||||+|+||++++++|+++|+ +|+++ .|++.......+ +..... ++.++.+|++|++++.++++      
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGI-NVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTC-CEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            357999999999999999999999999 99998 555443222211 100111 78999999999998887775      


Q ss_pred             -CccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|+|||+||....    ....+++...+++|+.++.++++++..    .+.++||++||..+.++.+..         
T Consensus        82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------  152 (247)
T 2hq1_A           82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQ---------  152 (247)
T ss_dssp             SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------C---------
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCC---------
Confidence             68999999997543    123445678899999999988887653    466799999997665543321         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+.   ++++++++|+.+.++.....   .......+..+.      ....
T Consensus       153 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~------~~~~  212 (247)
T 2hq1_A          153 -----------ANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL---PDKVKEMYLNNI------PLKR  212 (247)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTS------TTSS
T ss_pred             -----------cHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc---chHHHHHHHhhC------CCCC
Confidence                       379999999999999887654   89999999999987642211   111222222222      2346


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +++++|+|+++..++...  ...| .|+++++
T Consensus       213 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          213 FGTPEEVANVVGFLASDDSNYITGQVINIDGG  244 (247)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence            899999999999888653  2345 5676654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.93  E-value=5.5e-25  Score=186.62  Aligned_cols=220  Identities=18%  Similarity=0.094  Sum_probs=156.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||+|+||++++++|+++|+ +|++++|+............  . ++.++.+|++|++++.++++       
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~D~~d~~~v~~~~~~~~~~~g   85 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLE--N-GGFAVEVDVTKRASVDAAMQKAIDALG   85 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCT--T-CCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHh--c-CCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999 99999997654333322211  1 57789999999999888876       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CC-CCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      ++|+|||+||.....    ...+++...+++|+.++.++++++..    .+ .+++|++||..+..+.+.          
T Consensus        86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  155 (263)
T 3ak4_A           86 GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL----------  155 (263)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT----------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC----------
Confidence            789999999975432    12234577899999999999887754    24 579999999755432221          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCCh---h-----HHHHHHHHcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA---S-----CAVLQQLLQGSKD  219 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~---~-----~~~~~~~~~~~~~  219 (331)
                                ...|+.+|...+.+.+.++.+   .|++++++||+.++++........   .     ......+....  
T Consensus       156 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  223 (263)
T 3ak4_A          156 ----------LAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT--  223 (263)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC--
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC--
Confidence                      137999999999999888766   389999999999998753210000   0     11111122211  


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                          ....+++++|+|++++.++...  ...| .+++.++
T Consensus       224 ----p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          224 ----PLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG  259 (263)
T ss_dssp             ----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ----CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence                2346899999999999988754  2456 5666553

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=6.7e-25  Score=183.79  Aligned_cols=207  Identities=22%  Similarity=0.169  Sum_probs=155.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------Ccc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d   82 (331)
                      +|+||||||+|+||++++++|+++|+ +|++++|+.. .    +       ++.++.+|++|++++.++++      ++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~-~----~-------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   68 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRRE-G----E-------DLIYVEGDVTREEDVRRAVARAQEEAPLF   68 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCC-S----S-------SSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCcc-c----c-------ceEEEeCCCCCHHHHHHHHHHHHhhCCce
Confidence            46899999999999999999999999 9999998764 1    1       56789999999999988886      789


Q ss_pred             EEEEcccCCCCCCCC----C----chhhhhHHHHHHHHHHHHHHHhC----C------CCEEEEeCccceeccCCCCCCc
Q 020110           83 GVFHVASPCTLEDPV----D----PEKELILPAVQGTLNVLEAAKRF----G------VRRVVVTSSISAIVPNPGWKGK  144 (331)
Q Consensus        83 ~vih~a~~~~~~~~~----~----~~~~~~~~n~~~~~~l~~~~~~~----~------~~~~v~~SS~~~~~~~~~~~~~  144 (331)
                      +|||+|+........    +    ++...+++|+.++.++++++...    +      .++||++||..++.+.+..   
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  145 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ---  145 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC---
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCC---
Confidence            999999976532211    1    45778999999999999988654    1      1289999998654432221   


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCcc
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (331)
                                       ..|+.+|...+.+.+.++.+   .+++++++||+.++++.....   .......+..+.+.  
T Consensus       146 -----------------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~--  203 (242)
T 1uay_A          146 -----------------AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVPF--  203 (242)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCCS--
T ss_pred             -----------------chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc---chhHHHHHHhhCCC--
Confidence                             37999999999999888765   389999999999999864321   11222233332221  


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESPAASG-RYLCTNG  256 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~~~~g-~~~~~~~  256 (331)
                         ...+++++|+|++++.++......| .+++.++
T Consensus       204 ---~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG  236 (242)
T 1uay_A          204 ---PPRLGRPEEYAALVLHILENPMLNGEVVRLDGA  236 (242)
T ss_dssp             ---SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             ---cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCC
Confidence               1457899999999999998755566 4666543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.93  E-value=5e-25  Score=186.51  Aligned_cols=228  Identities=16%  Similarity=0.107  Sum_probs=159.2

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHh-
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAV-   78 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~-   78 (331)
                      |+.....++|++|||||+|+||++++++|+++|+ +|++++|+........+ +..... ++.++.+|++|++++.+++ 
T Consensus         1 m~~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~   78 (260)
T 2ae2_A            1 MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMN   78 (260)
T ss_dssp             -CCTTCCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHH
Confidence            4333334567999999999999999999999999 99999997644322211 111112 7889999999999888777 


Q ss_pred             -------cCccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCC
Q 020110           79 -------EGCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKG  143 (331)
Q Consensus        79 -------~~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  143 (331)
                             .++|++||+||.....    ...+++...+++|+.++.++++++.    +.+.+++|++||..+..+.+..  
T Consensus        79 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--  156 (260)
T 2ae2_A           79 TVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE--  156 (260)
T ss_dssp             HHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC--
T ss_pred             HHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCc--
Confidence                   4689999999975431    1233457789999999999999873    4566799999997554332211  


Q ss_pred             ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCC-Ch-hHHHHHHHHcCCC
Q 020110          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL-NA-SCAVLQQLLQGSK  218 (331)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~-~~-~~~~~~~~~~~~~  218 (331)
                                        ..|+.+|...+.+.+.++.+.   ++++++++||.+.++...... .. ....+..+.... 
T Consensus       157 ------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-  217 (260)
T 2ae2_A          157 ------------------AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC-  217 (260)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS-
T ss_pred             ------------------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC-
Confidence                              379999999999999988664   899999999999887421100 00 011111222221 


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                           ....+.+++|+|++++.++...  ...| .+++.++
T Consensus       218 -----~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  253 (260)
T 2ae2_A          218 -----ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  253 (260)
T ss_dssp             -----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence                 2345889999999999888653  2356 4566554

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.93  E-value=9.7e-26  Score=183.67  Aligned_cols=186  Identities=14%  Similarity=0.138  Sum_probs=143.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC---ccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---CKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~vi   85 (331)
                      +|+||||||+|+||++++++|+ +|+ +|++++|+..                 .+.+|+++++++.+++++   +|+||
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~~~~d~vi   63 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG-----------------DVTVDITNIDSIKKMYEQVGKVDAIV   63 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS-----------------SEECCTTCHHHHHHHHHHHCCEEEEE
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc-----------------ceeeecCCHHHHHHHHHHhCCCCEEE
Confidence            3489999999999999999999 999 9999998753                 367999999999888865   89999


Q ss_pred             EcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           86 HVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        86 h~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      |+||......    ..++....+++|+.++.++++++...   + +++|++||..+..+.+.                  
T Consensus        64 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~------------------  124 (202)
T 3d7l_A           64 SATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQ------------------  124 (202)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTT------------------
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCc------------------
Confidence            9999654321    12233567889999999999998776   4 68999999754322111                  


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHH--cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHH
Q 020110          159 SRKKWYPVSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAK  236 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~  236 (331)
                        ...|+.+|...|.+.+.++.+  .+++++++||+.++++...            ...+      ...+++++++|+|+
T Consensus       125 --~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~------------~~~~------~~~~~~~~~~dva~  184 (202)
T 3d7l_A          125 --GASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK------------LEPF------FEGFLPVPAAKVAR  184 (202)
T ss_dssp             --CHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH------------HGGG------STTCCCBCHHHHHH
T ss_pred             --cHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh------------hhhh------ccccCCCCHHHHHH
Confidence              137999999999999988765  3899999999999987421            0111      13467899999999


Q ss_pred             HHHHhhcCCCCCc-eEEE
Q 020110          237 AQVLLFESPAASG-RYLC  253 (331)
Q Consensus       237 a~~~~l~~~~~~g-~~~~  253 (331)
                      +++.++... ..| .|++
T Consensus       185 ~~~~~~~~~-~~G~~~~v  201 (202)
T 3d7l_A          185 AFEKSVFGA-QTGESYQV  201 (202)
T ss_dssp             HHHHHHHSC-CCSCEEEE
T ss_pred             HHHHhhhcc-ccCceEec
Confidence            999888543 445 5654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.93  E-value=9.8e-26  Score=189.27  Aligned_cols=218  Identities=18%  Similarity=0.184  Sum_probs=153.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEE-ecCCCccchhhc-CCCCCCCcEEE-EEccCCCchHHHHHhc------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFA-LPGAGDANLRV-FEADVLDSGAVSRAVE------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~-~~~Dl~~~~~~~~~~~------   79 (331)
                      ||+||||||+|+||++++++|+++|+ +|+++ .|+......+.. +..... ++.. +.+|++|.+++.++++      
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGS-PLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTC-SCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999 99988 676543322211 100111 5566 8999999998887754      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|+|||+||.....    ...+++...+++|+.++.++++++    ++.+.++||++||..++++.+..         
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------  149 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQ---------  149 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSB---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCC---------
Confidence             689999999975431    123345678999999966665544    45567899999997665543321         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++++.   +++++++||+.++++.....   ..........+.      ....
T Consensus       150 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~------~~~~  209 (245)
T 2ph3_A          150 -----------ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL---PQEVKEAYLKQI------PAGR  209 (245)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHTC------TTCS
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc---CHHHHHHHHhcC------CCCC
Confidence                       379999999999998887664   89999999999998754321   112222222222      1346


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCTNGI  257 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~~  257 (331)
                      +++++|+|+++..++..+.  ..| .|+++++.
T Consensus       210 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          210 FGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            8899999999999887542  345 56666543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.93  E-value=6.9e-25  Score=184.23  Aligned_cols=223  Identities=17%  Similarity=0.153  Sum_probs=164.1

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      |..|++.++|++|||||+|+||++++++|+++|+ +|++++|+........+...  . +..++.+|++|++++.++++ 
T Consensus         1 M~~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~Dv~d~~~v~~~~~~   76 (248)
T 3op4_A            1 MSQFMNLEGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLG--D-NGKGMALNVTNPESIEAVLKA   76 (248)
T ss_dssp             -CCTTCCTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHG--G-GEEEEECCTTCHHHHHHHHHH
T ss_pred             CccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc--c-cceEEEEeCCCHHHHHHHHHH
Confidence            6666666678999999999999999999999999 99999997654433322111  1 67889999999999888776 


Q ss_pred             ------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCcc
Q 020110           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        80 ------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                            ++|++||+||.....    ...+++...+++|+.++.++++++..    .+..++|++||..+..+.++.    
T Consensus        77 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~----  152 (248)
T 3op4_A           77 ITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ----  152 (248)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC----
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC----
Confidence                  689999999976532    12344577899999999999998743    456799999998666544332    


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccC
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (331)
                                      ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.....   ............     
T Consensus       153 ----------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~-----  208 (248)
T 3op4_A          153 ----------------ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL---NDEQRTATLAQV-----  208 (248)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS---CHHHHHHHHHTC-----
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc---CHHHHHHHHhcC-----
Confidence                            37999999999999888765   489999999999998864331   112222222222     


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                       ....+.+++|+|+++.+++....  ..| .+++.++
T Consensus       209 -p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG  244 (248)
T 3op4_A          209 -PAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG  244 (248)
T ss_dssp             -TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence             23567899999999998886542  356 4566553

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.93  E-value=1.8e-25  Score=189.64  Aligned_cols=223  Identities=17%  Similarity=0.110  Sum_probs=157.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+........+ +....+.++.++.+|++|++++.++++       
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999 99999997644322211 100001168899999999998888775       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+||......    ..+++...+++|+.++.++++++.    +.+.+++|++||..++.+.+..          
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  154 (263)
T 3ai3_A           85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYE----------  154 (263)
T ss_dssp             SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc----------
Confidence            6899999999754321    223456789999999999988774    3466799999998554332211          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC--------hhHHHHHHHHcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGSKDT  220 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~  220 (331)
                                ..|+.+|...+.+.+.++.+   +|+++++++|+.++++.......        ........+....   
T Consensus       155 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  221 (263)
T 3ai3_A          155 ----------PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH---  221 (263)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH---
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC---
Confidence                      37999999999999988866   68999999999999985321000        0011112221110   


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                        .....+++++|+|++++.++..+.  ..| .+++.++
T Consensus       222 --~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG  258 (263)
T 3ai3_A          222 --APIKRFASPEELANFFVFLCSERATYSVGSAYFVDGG  258 (263)
T ss_dssp             --CTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             --CCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence              123468999999999999887543  346 5666543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.93  E-value=1.9e-25  Score=190.61  Aligned_cols=219  Identities=19%  Similarity=0.170  Sum_probs=156.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEec-CCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++| +......+. ++..... ++.++.+|++|++++.++++      
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHF   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999 9999988 433222111 1111111 78899999999999888776      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCcccee-ccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAI-VPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~-~~~~~~~~~~~~E~~  150 (331)
                       ++|+|||+|+.....    ...+++...+++|+.++.++++++...   + ++||++||..++ .+.+.          
T Consensus        98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~----------  166 (274)
T 1ja9_A           98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPN----------  166 (274)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCS----------
T ss_pred             CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCC----------
Confidence             789999999975431    122334678999999999999988664   4 689999997554 22111          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCC-----------CCChhHHHHHHHHcC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQP-----------YLNASCAVLQQLLQG  216 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~-----------~~~~~~~~~~~~~~~  216 (331)
                                ...|+.+|...|.+.+.++++.   +++++++||+.++++....           ... .......+..+
T Consensus       167 ----------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  235 (274)
T 1ja9_A          167 ----------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMP-QEKIDEGLANM  235 (274)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCC-HHHHHHHHHHT
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCc-hHHHHHHHHhc
Confidence                      1379999999999999888664   8999999999998874320           000 01222222222


Q ss_pred             CCCccCcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       217 ~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      .      ...++++++|+|++++.++..+.  ..| .|+++++
T Consensus       236 ~------~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          236 N------PLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             S------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C------CCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence            2      24578999999999999987543  245 5677654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.93  E-value=5.5e-25  Score=185.00  Aligned_cols=219  Identities=17%  Similarity=0.118  Sum_probs=157.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCC-CCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+......+.+.... .+.++.++.+|++|++++.++++       
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            357999999999999999999999999 999999976443322110000 01168899999999999888876       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+|+.....    ...+++...+++|+.++.++++++    ++.+.++||++||..++++.+..          
T Consensus        85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------  154 (248)
T 2pnf_A           85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQ----------  154 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTC----------
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCC----------
Confidence            789999999975432    122345678999999997777655    34467899999997665543321          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++++   .+++++++||+.++++..... .  ...........      ....+
T Consensus       155 ----------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~-~--~~~~~~~~~~~------~~~~~  215 (248)
T 2pnf_A          155 ----------VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL-S--EEIKQKYKEQI------PLGRF  215 (248)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-C--HHHHHHHHHTC------TTSSC
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc-c--HHHHHHHHhcC------CCCCc
Confidence                      37999999999999888765   489999999999999864321 1  11122222221      12458


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          229 VPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      ++++|+|+++..++...  ...| .|+++++
T Consensus       216 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          216 GSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            99999999999988753  2345 5666553

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.93  E-value=1.3e-24  Score=186.60  Aligned_cols=221  Identities=22%  Similarity=0.219  Sum_probs=161.1

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      ..++|+||||||+|+||++++++|+++|+ +|++++|+......... +......++.++.+|++|++++.++++     
T Consensus        38 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           38 DLSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            34567999999999999999999999999 99999998765444332 222221278999999999988877764     


Q ss_pred             --CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCcccee-ccCCCCCCccccC
Q 020110           80 --GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAI-VPNPGWKGKVFDE  148 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~-~~~~~~~~~~~~E  148 (331)
                        ++|++||+||......    ..+++...+++|+.++.++++++    ++.+..++|++||..+. .+.+..       
T Consensus       117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~-------  189 (293)
T 3rih_A          117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGW-------  189 (293)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTC-------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCC-------
Confidence              5799999999765422    23345778999999999999987    35567899999997542 322221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                   ..|+.+|...+.+.+.++.+   +|+++++++||.++++.....   .......+....+      .
T Consensus       190 -------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~  247 (293)
T 3rih_A          190 -------------SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM---GEEYISGMARSIP------M  247 (293)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT---CHHHHHHHHTTST------T
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc---cHHHHHHHHhcCC------C
Confidence                         37999999999999988866   589999999999999753211   1223333333322      2


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      ..+..++|+|+++.+++...  ...| .+++.++
T Consensus       248 ~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  281 (293)
T 3rih_A          248 GMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG  281 (293)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            34568999999999988653  3456 4566543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.93  E-value=1.1e-24  Score=186.53  Aligned_cols=228  Identities=19%  Similarity=0.175  Sum_probs=159.9

Q ss_pred             cccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc---------cchhhc----CCCCCCCcEEEEEccCC
Q 020110            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---------SSHLFA----LPGAGDANLRVFEADVL   69 (331)
Q Consensus         3 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~---------~~~~~~----~~~~~~~~~~~~~~Dl~   69 (331)
                      .|...+.|++|||||+|+||++++++|+++|+ +|++++|+...         ...+.+    ...... ++.++.+|++
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~   81 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGR-RCISAKVDVK   81 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCC-eEEEEeCCCC
Confidence            34455678999999999999999999999999 99999987432         111111    001112 7899999999


Q ss_pred             CchHHHHHhc-------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccce
Q 020110           70 DSGAVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISA  134 (331)
Q Consensus        70 ~~~~~~~~~~-------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~  134 (331)
                      |++++.++++       ++|++||+||.....    ...+++...+++|+.++.++++++.    +.+..++|++||..+
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  161 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG  161 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            9998888775       689999999976532    2233457789999999999999863    345679999999866


Q ss_pred             eccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCC-----C--
Q 020110          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-----N--  204 (331)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~-----~--  204 (331)
                      ..+.+..                    ..|+.+|...+.+.+.++.+   +|+++++++||.++++......     .  
T Consensus       162 ~~~~~~~--------------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~  221 (281)
T 3s55_A          162 HSANFAQ--------------------ASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPD  221 (281)
T ss_dssp             GSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC----
T ss_pred             cCCCCCC--------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccc
Confidence            4433221                    37999999999999998875   5899999999999998753210     0  


Q ss_pred             ---hhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          205 ---ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       205 ---~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                         ............    .......+.+++|+|+++++++....  ..| .+++.++
T Consensus       222 ~~~~~~~~~~~~~~~----~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG  275 (281)
T 3s55_A          222 LEKPTLKDVESVFAS----LHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG  275 (281)
T ss_dssp             ---CCHHHHHHHHHH----HCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccccchhHHHHHHHh----hhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence               000000000000    01123678999999999999987543  346 5666553

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.93  E-value=6.1e-25  Score=185.43  Aligned_cols=221  Identities=18%  Similarity=0.152  Sum_probs=156.0

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcE-EEEEccCCCchHHHHHh------c
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDSGAVSRAV------E   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~------~   79 (331)
                      .++|+||||||+|+||++++++|+++|+ +|++++|+........+..  .. ++ .++.+|++|++++.+++      .
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQEL--GA-AVAARIVADVTDAEAMTAAAAEAEAVA   84 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--GG-GEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--cc-cceeEEEEecCCHHHHHHHHHHHHhhC
Confidence            3457999999999999999999999999 9999999765433222110  11 56 88999999999888776      4


Q ss_pred             CccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+||.......    .+.....+++|+.++.++++++    ++.+.++||++||..++.+.+..          
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------  154 (254)
T 2wsb_A           85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ----------  154 (254)
T ss_dssp             CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS----------
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC----------
Confidence            68999999997653221    2234677889999988777765    34467899999997554332211          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                        +      ...|+.+|...+.+.+.++.+.   +++++++||+.++++..... .........+....+      ...+
T Consensus       155 --~------~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~------~~~~  219 (254)
T 2wsb_A          155 --F------ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKM-RERPELFETWLDMTP------MGRC  219 (254)
T ss_dssp             --C------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHH-HTCHHHHHHHHHTST------TSSC
T ss_pred             --c------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcc-ccChHHHHHHHhcCC------CCCC
Confidence              1      1379999999999999887664   89999999999999853210 000122233333221      2468


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          229 VPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      ++++|+|++++.++...  ...| .+++.++
T Consensus       220 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          220 GEPSEIAAAALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            99999999999988653  2356 4566554

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=3.2e-25  Score=189.74  Aligned_cols=231  Identities=20%  Similarity=0.147  Sum_probs=158.7

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC-------------ccchhhcCCCCCCCcEEEEEccCCC
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-------------DSSHLFALPGAGDANLRVFEADVLD   70 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-------------~~~~~~~~~~~~~~~~~~~~~Dl~~   70 (331)
                      |...+.|++|||||+|+||++++++|+++|+ +|++++|+..             ......+.....+.++.++.+|++|
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   88 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD   88 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            3345568999999999999999999999999 9999988421             1111111111112278999999999


Q ss_pred             chHHHHHhc-------CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CC-CCEEEEeCccce
Q 020110           71 SGAVSRAVE-------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISA  134 (331)
Q Consensus        71 ~~~~~~~~~-------~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~  134 (331)
                      ++++.++++       ++|++||+||......    ..+++...+++|+.++.++++++..    .+ ..++|++||..+
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            999888775       6899999999765321    2344567899999999999998733    22 468999999866


Q ss_pred             eccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHH
Q 020110          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQ  211 (331)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~  211 (331)
                      ..+.+..                    ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.....  .....+.
T Consensus       169 ~~~~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~  226 (280)
T 3pgx_A          169 LKATPGN--------------------GHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE--AMMEIFA  226 (280)
T ss_dssp             TSCCTTB--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH--HHHHHHH
T ss_pred             ccCCCCc--------------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh--hhhhhhh
Confidence            5433221                    37999999999999988866   689999999999999864321  1111111


Q ss_pred             HHH-cCCCC-ccCcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 020110          212 QLL-QGSKD-TQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNGI  257 (331)
Q Consensus       212 ~~~-~~~~~-~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~~  257 (331)
                      ... ..... ..+.....+.+++|+|+++++++....  ..| .+++.++.
T Consensus       227 ~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          227 RHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             cCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            100 00011 111122248999999999999886543  456 45666543

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.93  E-value=1.4e-24  Score=183.34  Aligned_cols=222  Identities=15%  Similarity=0.074  Sum_probs=157.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+..............+.++.++.+|++|++++.++++       +
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 99999998655443332211112279999999999998887775       6


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH-----HhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA-----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|++||+||.....    ...+++...+++|+.++.++.+++     ++.+..++|++||..+..+.++.          
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  153 (257)
T 3imf_A           84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGV----------  153 (257)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTC----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCc----------
Confidence            89999999965431    223445778999999999999987     34446799999998665433221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHH----HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAE----KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~----~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                ..|+.+|...+.+.+.++.    .+|+++++++||.+.++....................      ....
T Consensus       154 ----------~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------p~~r  217 (257)
T 3imf_A          154 ----------IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV------PLGR  217 (257)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS------TTCS
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC------CCCC
Confidence                      3799999999988887764    3489999999999998864321100000111111111      2345


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      +..++|+|+++++++....  ..| .+++.++
T Consensus       218 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  249 (257)
T 3imf_A          218 LGTPEEIAGLAYYLCSDEAAYINGTCMTMDGG  249 (257)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            7899999999999887543  356 4556543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.93  E-value=5.3e-25  Score=186.54  Aligned_cols=222  Identities=15%  Similarity=0.106  Sum_probs=155.1

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEec-CCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      ..++|+||||||+|+||++++++|+++|+ +|++++| +......+.+ +..... ++.++.+|++|++++.++++    
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHH
Confidence            34567999999999999999999999999 9999998 4432222111 111111 68899999999998887775    


Q ss_pred             ---CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CC-CCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                         ++|+|||+||.....    ...+++...+++|+.++.++++++..    .+ .+++|++||..+..+.+.       
T Consensus        82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------  154 (261)
T 1gee_A           82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL-------  154 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCC-------
Confidence               689999999975431    12234567899999999988887643    34 579999999755332211       


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                   ...|+.+|...+.+.+.++.+.   +++++++||+.++++..... .........+....      .
T Consensus       155 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~------~  214 (261)
T 1gee_A          155 -------------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK-FADPEQRADVESMI------P  214 (261)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH-HHSHHHHHHHHTTC------T
T ss_pred             -------------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhc-ccChhHHHHHHhcC------C
Confidence                         1379999999999988887653   89999999999999863210 00011122222211      1


Q ss_pred             CCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          225 WLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      ...+++++|+|++++.++...  ...| .+++.++
T Consensus       215 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  249 (261)
T 1gee_A          215 MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence            245889999999999988643  2356 4566554

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.93  E-value=7.3e-25  Score=187.42  Aligned_cols=229  Identities=19%  Similarity=0.224  Sum_probs=155.9

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      +.++|++|||||+|+||++++++|+++|+ +|++++|+... ..... ++....+.++.++.+|++|++++.++++    
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            34457999999999999999999999999 99999884422 22211 1111112278999999999999888775    


Q ss_pred             ---CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                         ++|++||+||......    ..+++...+++|+.++.++++++    ++.+..++|++||..+..+.+..       
T Consensus       101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  173 (281)
T 3v2h_A          101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFK-------  173 (281)
T ss_dssp             HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-------
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCc-------
Confidence               6899999999765422    23445778999999999999987    44466789999998665443321       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCC----CCcc
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS----KDTQ  221 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~----~~~~  221 (331)
                                   ..|+.+|...+.+.+.++.+   .|+++.+++||.+.++.......... .........    ....
T Consensus       174 -------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  239 (281)
T 3v2h_A          174 -------------SAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQA-RTRGITEEQVINEVMLK  239 (281)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------------------------
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhh-hhcCCCHHHHHHHHHHh
Confidence                         37999999999999988866   48999999999999986432111000 000000000    0011


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      +.....+++++|+|++++.++....  ..| .+++.++
T Consensus       240 ~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG  277 (281)
T 3v2h_A          240 GQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGG  277 (281)
T ss_dssp             CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTT
T ss_pred             cCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCC
Confidence            2245679999999999999887653  456 4566543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=1.3e-24  Score=182.89  Aligned_cols=204  Identities=19%  Similarity=0.119  Sum_probs=148.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +|+||||||+|+||++++++|+++|  + +|++++|+......+.+.  ... ++.++.+|+++++++.++++       
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~--~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSI--KDS-RVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTC--CCT-TEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhc--cCC-ceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999999  9 999999987665555443  122 79999999999998888776       


Q ss_pred             --CccEEEEcccCCC-CC----CCCCchhhhhHHHHHHHHHHHHHHHhC----------C-----CCEEEEeCccceecc
Q 020110           80 --GCKGVFHVASPCT-LE----DPVDPEKELILPAVQGTLNVLEAAKRF----------G-----VRRVVVTSSISAIVP  137 (331)
Q Consensus        80 --~~d~vih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~-----~~~~v~~SS~~~~~~  137 (331)
                        ++|+|||+||... ..    ...++....+++|+.++.++++++...          +     .++||++||..++++
T Consensus        79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  158 (250)
T 1yo6_A           79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence              7999999999765 21    222335678999999999998876543          4     679999999865443


Q ss_pred             CCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHH
Q 020110          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLL  214 (331)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~  214 (331)
                      ...       +.++..+      ...|+.+|...+.+.+.++.+.   ++++++++|+.+.++....             
T Consensus       159 ~~~-------~~~~~~~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------  212 (250)
T 1yo6_A          159 DNT-------SGSAQFP------VLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------  212 (250)
T ss_dssp             TCC-------STTSSSC------BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------
T ss_pred             Ccc-------cccccCC------ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------
Confidence            211       1111111      1379999999999999988765   8999999999998775321             


Q ss_pred             cCCCCccCcCCCCceeHHHHHHHHHHhhcCCC--CCceEEE
Q 020110          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (331)
Q Consensus       215 ~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~~~  253 (331)
                                 ..+++++|+|++++.++....  ..|.|+.
T Consensus       213 -----------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~  242 (250)
T 1yo6_A          213 -----------NAALTVEQSTAELISSFNKLDNSHNGRFFM  242 (250)
T ss_dssp             -----------------HHHHHHHHHHHTTCCGGGTTCEEE
T ss_pred             -----------CCCCCHHHHHHHHHHHHhcccccCCCeEEE
Confidence                       135789999999999998764  3566643

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.93  E-value=2.1e-24  Score=182.97  Aligned_cols=205  Identities=18%  Similarity=0.164  Sum_probs=152.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +|++|||||+|+||++++++|+++|+ +|++++|+..........      ++.++.+|++|.+++.++++       ++
T Consensus        16 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           16 KKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLP------NTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCT------TEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcC------CceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            46899999999999999999999999 999999875443222111      78899999999998887775       68


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |++||+||......    ..+++...+++|+.++.++++++.    +.+.+++|++||..++.+.+..            
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~------------  156 (266)
T 3p19_A           89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDH------------  156 (266)
T ss_dssp             EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCC------------
Confidence            99999999765422    223346779999999999777663    4467899999998665433221            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChh-HHHHHHHHcCCCCccCcCCCCce
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS-CAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                              ..|+.+|...+.+.+.++.+   +|+++++++||.+.++......... .........        ....++
T Consensus       157 --------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--------~~~r~~  220 (266)
T 3p19_A          157 --------AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRV--------DMGGVL  220 (266)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHH--------HTTCCB
T ss_pred             --------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcc--------cccCCC
Confidence                    37999999999999988766   5899999999999998643221111 111111000        134578


Q ss_pred             eHHHHHHHHHHhhcCCCCC
Q 020110          230 PVKDVAKAQVLLFESPAAS  248 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~~~  248 (331)
                      +++|+|++++.++..+...
T Consensus       221 ~pedvA~av~~l~~~~~~~  239 (266)
T 3p19_A          221 AADDVARAVLFAYQQPQNV  239 (266)
T ss_dssp             CHHHHHHHHHHHHHSCTTE
T ss_pred             CHHHHHHHHHHHHcCCCCc
Confidence            9999999999999877543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.92  E-value=1.5e-24  Score=183.51  Aligned_cols=211  Identities=17%  Similarity=0.183  Sum_probs=154.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+........+...  . ++.++.+|++|++++.++++       +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~   81 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELA--D-AARYVHLDVTQPAQWKAAVDTAVTAFGG   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTG--G-GEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhh--c-CceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 99999997654333221111  1 58889999999999888876       7


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+||.....    ...+++...+++|+.++.++.+++    ++.+.+++|++||..++.+.+..           
T Consensus        82 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  150 (260)
T 1nff_A           82 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC-----------  150 (260)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCc-----------
Confidence            99999999976432    122345778999999997766654    44567899999998654432211           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   +|++++++||+.++++...  ...           .... ......+.
T Consensus       151 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~-----------~~~~-~~~~~~~~  207 (260)
T 1nff_A          151 ---------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WVP-----------EDIF-QTALGRAA  207 (260)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TSC-----------TTCS-CCSSSSCB
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cch-----------hhHH-hCccCCCC
Confidence                     37999999999999988766   5899999999999998632  100           0000 11234578


Q ss_pred             eHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          230 PVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      +++|+|++++.++....  ..| .+++.++
T Consensus       208 ~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG  237 (260)
T 1nff_A          208 EPVEVSNLVVYLASDESSYSTGAEFVVDGG  237 (260)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            99999999999886532  346 5666554

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.92  E-value=1.6e-24  Score=185.01  Aligned_cols=225  Identities=19%  Similarity=0.131  Sum_probs=160.6

Q ss_pred             cccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      ...++|++|||||+|+||++++++|+++|+ +|++++|+......+.......+.++.++.+|++|++++.++++     
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            344568999999999999999999999999 99999987654333322111122278999999999998887775     


Q ss_pred             --CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCcccee-ccCCCCCCcccc
Q 020110           80 --GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAI-VPNPGWKGKVFD  147 (331)
Q Consensus        80 --~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~-~~~~~~~~~~~~  147 (331)
                        ++|++||+||....     ....+++...+++|+.++.++++++..    .+..++|++||..++ .+.+.       
T Consensus        83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  155 (280)
T 3tox_A           83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAG-------  155 (280)
T ss_dssp             HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTT-------
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCC-------
Confidence              68999999996532     123344578899999999999988743    355689999997543 22111       


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCC-ChhHHHHHHHHcCCCCccCc
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~  223 (331)
                                   ...|+.+|...+.+.+.++.+.   |+++++++||.+.++...... .........+....      
T Consensus       156 -------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------  216 (280)
T 3tox_A          156 -------------VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH------  216 (280)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTS------
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccC------
Confidence                         1379999999999999888664   899999999999998643211 00111222222222      


Q ss_pred             CCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      ....+.+++|+|+++++++...  ...| .+++.++
T Consensus       217 p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  252 (280)
T 3tox_A          217 ALKRIARPEEIAEAALYLASDGASFVTGAALLADGG  252 (280)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCC
Confidence            2345789999999999998754  3456 4566554

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.92  E-value=8.4e-25  Score=184.60  Aligned_cols=221  Identities=17%  Similarity=0.140  Sum_probs=160.1

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||+|+||++++++|+++|+ +|++++|+........+.....+.++.++.+|++|++++.++++       
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   88 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG   88 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4567999999999999999999999999 99999997654333222111111278999999999998887775       


Q ss_pred             CccEEEEcccCCCCCC---CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHVASPCTLED---PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      ++|++||+||......   ..+++...+++|+.++.++++++.    +.+..++|++||..+..+.+..           
T Consensus        89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  157 (256)
T 3gaf_A           89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRM-----------  157 (256)
T ss_dssp             CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTC-----------
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCc-----------
Confidence            6899999999765422   233457789999999999999873    4456799999998654433221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   +|+++.+++||.+.++......  .......+....      ....+.
T Consensus       158 ---------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~------p~~r~~  220 (256)
T 3gaf_A          158 ---------ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL--TPEIERAMLKHT------PLGRLG  220 (256)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC--CHHHHHHHHTTC------TTSSCB
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc--CHHHHHHHHhcC------CCCCCC
Confidence                     37999999999999988866   4899999999999887432110  112222333322      235678


Q ss_pred             eHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          230 PVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +++|+|+++++++...  ...| .+++.++
T Consensus       221 ~~~dva~~~~~L~s~~~~~itG~~i~vdgG  250 (256)
T 3gaf_A          221 EAQDIANAALFLCSPAAAWISGQVLTVSGG  250 (256)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHcCCcccCccCCEEEECCC
Confidence            9999999999988653  3456 5666554

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.92  E-value=2.2e-24  Score=184.19  Aligned_cols=217  Identities=18%  Similarity=0.172  Sum_probs=154.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEec-CCCccchhhc-CCCCCCCcEEEEEccCCCc----hHHHHHhc---
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFA-LPGAGDANLRVFEADVLDS----GAVSRAVE---   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~----~~~~~~~~---   79 (331)
                      +|++|||||+|+||++++++|+++|+ +|++++| +......+.+ +....+.++.++.+|++|.    +++.++++   
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            47899999999999999999999999 9999998 5433222211 1000011788999999999    88887775   


Q ss_pred             ----CccEEEEcccCCCCCC----CC-----------CchhhhhHHHHHHHHHHHHHHHhC---CC------CEEEEeCc
Q 020110           80 ----GCKGVFHVASPCTLED----PV-----------DPEKELILPAVQGTLNVLEAAKRF---GV------RRVVVTSS  131 (331)
Q Consensus        80 ----~~d~vih~a~~~~~~~----~~-----------~~~~~~~~~n~~~~~~l~~~~~~~---~~------~~~v~~SS  131 (331)
                          ++|+|||+||......    ..           +++...+++|+.++.++++++...   +.      +++|++||
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  169 (276)
T 1mxh_A           90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  169 (276)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence                6899999999754321    11           345678999999999999998764   33      68999999


Q ss_pred             cceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHH
Q 020110          132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCA  208 (331)
Q Consensus       132 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~  208 (331)
                      ..++.+.+..                    ..|+.+|...+.+.+.++.+.   |+++++++||.+.++ . . ..  ..
T Consensus       170 ~~~~~~~~~~--------------------~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~-~~--~~  224 (276)
T 1mxh_A          170 AMTDLPLPGF--------------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-A-MP--QE  224 (276)
T ss_dssp             GGGGSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-S-SC--HH
T ss_pred             hhhcCCCCCC--------------------eehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-c-CC--HH
Confidence            8665432221                    379999999999999887664   899999999999998 2 1 11  22


Q ss_pred             HHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          209 VLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ....+....+.     .+++.+++|+|+++++++....  ..| .+++.++
T Consensus       225 ~~~~~~~~~p~-----~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          225 TQEEYRRKVPL-----GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             HHHHHHTTCTT-----TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhcCCC-----CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence            22333322211     2338899999999999886532  356 4566554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.92  E-value=1e-24  Score=184.03  Aligned_cols=220  Identities=19%  Similarity=0.202  Sum_probs=154.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +|++|||||+|+||++++++|+++|+ +|++++|+.. .....++..... ++.++.+|++|++++.++++       ++
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~-~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDP-APALAEIARHGV-KAVHHPADLSDVAQIEALFALAEREFGGV   80 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCC-HHHHHHHHTTSC-CEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCch-HHHHHHHHhcCC-ceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999 9999998765 211222211112 68899999999999988886       78


Q ss_pred             cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+||.....    ...+++...+++|+.++.++.+++    ++.+.+++|++||..++.+.+..            
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  148 (255)
T 2q2v_A           81 DILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGK------------  148 (255)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTB------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCc------------
Confidence            9999999975431    123345778999999877776655    55667899999998654432221            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHH---H----HHHHcCCCCccCc
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAV---L----QQLLQGSKDTQEY  223 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~---~----~~~~~~~~~~~~~  223 (331)
                              ..|+.+|...+.+.+.++.+   +|+++++++|+.++++............   .    ..+. ...    .
T Consensus       149 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~  215 (255)
T 2q2v_A          149 --------AAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLL-AEK----Q  215 (255)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHH-TTT----C
T ss_pred             --------hhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHH-hcc----C
Confidence                    37999999999999988866   4799999999999987532100000000   0    1110 111    1


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ....+++++|+|++++.++....  ..| .+++.++
T Consensus       216 p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          216 PSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             TTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence            23568999999999998886542  346 4566553

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.92  E-value=3.1e-24  Score=180.51  Aligned_cols=217  Identities=18%  Similarity=0.098  Sum_probs=153.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---CccE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKG   83 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   83 (331)
                      .+.|+||||||+|+||++++++|+++|+ +|++++|+......+.+...  . ++.++.+|+++.+++.++++   ++|+
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~D~~~~~~~~~~~~~~~~id~   87 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALK--D-NYTIEVCNLANKEECSNLISKTSNLDI   87 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC--S-SEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhc--c-CccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            4568999999999999999999999999 99999997654433322111  1 78899999999999998886   5899


Q ss_pred             EEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           84 VFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        84 vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      |||+||....    ....+++...+++|+.++.++++++.    +.+..++|++||..++.+.+..              
T Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  153 (249)
T 3f9i_A           88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQ--------------  153 (249)
T ss_dssp             EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCS--------------
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCC--------------
Confidence            9999997653    23345678899999999999988773    3355789999998665443321              


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHH
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  232 (331)
                            ..|+.+|...+.+.+.++.+   .|+++++++||.+.++.....   .......+..+.      ....+.+++
T Consensus       154 ------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------~~~~~~~~~  218 (249)
T 3f9i_A          154 ------ANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL---NEKQREAIVQKI------PLGTYGIPE  218 (249)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C---CHHHHHHHHHHC------TTCSCBCHH
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc---CHHHHHHHHhcC------CCCCCcCHH
Confidence                  37999999999999888765   589999999999998864332   112222222222      245688999


Q ss_pred             HHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          233 DVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       233 D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      |+|++++.++....  ..| .+++.++
T Consensus       219 dva~~~~~l~s~~~~~~tG~~~~vdgG  245 (249)
T 3f9i_A          219 DVAYAVAFLASNNASYITGQTLHVNGG  245 (249)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHcCCccCCccCcEEEECCC
Confidence            99999999987543  356 4566554

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.92  E-value=1.4e-24  Score=184.39  Aligned_cols=217  Identities=18%  Similarity=0.142  Sum_probs=157.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|+++.|+... ...+.......+.++.++.+|++|++++.++++      
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW  104 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3457999999999999999999999999 99988884322 222111111111278899999999998887775      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|++||+||.....    ...+++...+++|+.++.++++++.    +.+..++|++||..+..+.++.         
T Consensus       105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  175 (269)
T 4dmm_A          105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQ---------  175 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc---------
Confidence             689999999976532    2234457789999999999999873    3456799999998665544332         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+   +|+++++++||.+.++....    .  .........      ....
T Consensus       176 -----------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----~--~~~~~~~~~------p~~r  232 (269)
T 4dmm_A          176 -----------ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE----L--AAEKLLEVI------PLGR  232 (269)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH----H--HHHHHGGGC------TTSS
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc----c--cHHHHHhcC------CCCC
Confidence                       37999999999998888765   58999999999999886431    1  112222221      2345


Q ss_pred             ceeHHHHHHHHHHhhcCCC---CCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESPA---ASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~---~~g-~~~~~~~  256 (331)
                      +.+++|+|++++.++..+.   ..| .+++.++
T Consensus       233 ~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG  265 (269)
T 4dmm_A          233 YGEAAEVAGVVRFLAADPAAAYITGQVINIDGG  265 (269)
T ss_dssp             CBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHhCCcccCCCcCCEEEECCC
Confidence            7889999999999997632   346 4566543

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.92  E-value=3.3e-24  Score=182.07  Aligned_cols=216  Identities=18%  Similarity=0.130  Sum_probs=156.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+........+..  .. ++.++.+|++|++++.++++       +
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKL--GN-NCVFAPADVTSEKDVQTALALAKGKFGR   86 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHH--CT-TEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHh--CC-ceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            457999999999999999999999999 9999999876544332211  11 78999999999999888876       7


Q ss_pred             ccEEEEcccCCCCC----------CCCCchhhhhHHHHHHHHHHHHHHHhC----------CCCEEEEeCccceeccCCC
Q 020110           81 CKGVFHVASPCTLE----------DPVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVPNPG  140 (331)
Q Consensus        81 ~d~vih~a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~SS~~~~~~~~~  140 (331)
                      +|+|||+||.....          ...+++...+++|+.++.++++++...          +.+++|++||..++.+.+.
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  166 (265)
T 2o23_A           87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG  166 (265)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT
T ss_pred             CCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCC
Confidence            89999999976432          122335778999999999999988654          5578999999865443222


Q ss_pred             CCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCC
Q 020110          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS  217 (331)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  217 (331)
                      .                    ..|+.+|...+.+.+.++.+   .++++++++|+.+.++..... .  ......+....
T Consensus       167 ~--------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~--~~~~~~~~~~~  223 (265)
T 2o23_A          167 Q--------------------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL-P--EKVCNFLASQV  223 (265)
T ss_dssp             C--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTC
T ss_pred             C--------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc-C--HHHHHHHHHcC
Confidence            1                    37999999999998888765   489999999999988754221 0  00001111111


Q ss_pred             CCccCcCCCCceeHHHHHHHHHHhhcCCCCCc-eEEEec
Q 020110          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPAASG-RYLCTN  255 (331)
Q Consensus       218 ~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g-~~~~~~  255 (331)
                      +.     ...+++++|+|++++.++......| .+.+.+
T Consensus       224 ~~-----~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdg  257 (265)
T 2o23_A          224 PF-----PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDG  257 (265)
T ss_dssp             SS-----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             CC-----cCCCCCHHHHHHHHHHHhhcCccCceEEEECC
Confidence            11     1357899999999999998766667 455554

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.92  E-value=3.2e-24  Score=183.58  Aligned_cols=228  Identities=19%  Similarity=0.110  Sum_probs=158.2

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      |+..++|++|||||+|+||++++++|+++|+ +|++++|+......... +..... ++.++.+|++|++++.++++   
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~  100 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSDELQMRNAVRDLV  100 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHH
Confidence            3344567899999999999999999999999 99999998654433322 222222 78999999999998887775   


Q ss_pred             ----CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccc
Q 020110           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                          ++|++||+||....     +...+++...+++|+.++.++++++    ++.+..++|++||..+....+.      
T Consensus       101 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~------  174 (283)
T 3v8b_A          101 LKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTT------  174 (283)
T ss_dssp             HHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCS------
T ss_pred             HHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCC------
Confidence                68999999997532     2223345778999999999999987    4456679999999755331111      


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---  220 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---  220 (331)
                             +     ....|+.+|...+.+.+.++.+   +|+++.+++||.+.++..........     .....+..   
T Consensus       175 -------~-----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-----~~~~~~~~~~~  237 (283)
T 3v8b_A          175 -------P-----GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHE-----EETAIPVEWPK  237 (283)
T ss_dssp             -------T-----TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH-----HHHSCCCBCTT
T ss_pred             -------C-----CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccc-----hhhhhhhhhhh
Confidence                   0     1137999999999999998876   47999999999999886533211110     00111111   


Q ss_pred             --cCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          221 --QEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       221 --~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                        .+.....+..++|+|+++++++...  ...|. +.+.|+
T Consensus       238 ~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          238 GQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             CSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence              1111145678999999999988653  34564 455543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.92  E-value=5.1e-25  Score=186.53  Aligned_cols=220  Identities=18%  Similarity=0.155  Sum_probs=155.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +.|++|||||+|+||++++++|+++|+ +|++++|+........ ++..... ++.++.+|++|++++.++++       
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999 9999999764432221 1111112 68899999999998887775       


Q ss_pred             CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      ++|+|||+||....     +...+++...+++|+.++.++++++.    +.+.+++|++||..++.+.+..         
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  161 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNL---------  161 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTB---------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCc---------
Confidence            68999999996431     12233457789999999999888764    4567899999997554322211         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+.   |+++++++|+.+.++....... .......+...      .....
T Consensus       162 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~------~~~~~  223 (260)
T 2zat_A          162 -----------GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM-DKARKEYMKES------LRIRR  223 (260)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS-SHHHHHHHHHH------HTCSS
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc-ChHHHHHHHhc------CCCCC
Confidence                       379999999999999887663   8999999999999875321000 00001111111      12356


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      +.+++|+|+++..++....  ..| .++++++
T Consensus       224 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  255 (260)
T 2zat_A          224 LGNPEDCAGIVSFLCSEDASYITGETVVVGGG  255 (260)
T ss_dssp             CBCGGGGHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHcCcccCCccCCEEEECCC
Confidence            8899999999999887543  356 5666543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.92  E-value=5.8e-25  Score=184.42  Aligned_cols=216  Identities=18%  Similarity=0.152  Sum_probs=154.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEE-ecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      |+||||||+|+||++++++|+++|+ +|+++ .|+......+.+ +..... ++.++.+|++|++++.++++       +
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999 99885 676443322211 100011 68899999999999888876       6


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+||.....    ...+++...+++|+.++.++++++..    .+.++||++||..++++.+..           
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  148 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ-----------  148 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC-----------
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCC-----------
Confidence            89999999976532    12234567899999999999988755    356799999998665543321           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++++   .+++++++||+.++++.....   ............      ....++
T Consensus       149 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~------~~~~~~  210 (244)
T 1edo_A          149 ---------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTI------PLGRTG  210 (244)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSC------TTCSCB
T ss_pred             ---------ccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---ChHHHHHHhhcC------CCCCCC
Confidence                     37999999999998888765   489999999999998754321   112222222221      124588


Q ss_pred             eHHHHHHHHHHhhcCCC---CCc-eEEEecc
Q 020110          230 PVKDVAKAQVLLFESPA---ASG-RYLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~---~~g-~~~~~~~  256 (331)
                      +++|+|+++..++.++.   ..| .+++.++
T Consensus       211 ~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG  241 (244)
T 1edo_A          211 QPENVAGLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             CHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence            99999999999884432   345 4566543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.92  E-value=9.7e-25  Score=186.36  Aligned_cols=222  Identities=16%  Similarity=0.090  Sum_probs=157.0

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .+.|++|||||+|+||++++++|+++|+ +|++++|+........ ++..... ++.++.+|++|++++.++++      
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERY   97 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3457999999999999999999999999 9999999764432221 1111112 68899999999998887775      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC------CCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF------GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                       ++|+|||+||.....    ...+++...+++|+.++.++++++...      +.++||++||..+.++.+..       
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------  170 (277)
T 2rhc_B           98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA-------  170 (277)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTC-------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCC-------
Confidence             689999999975432    122334778999999999999987654      55799999998654432221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCCh--h------HHHHHHHHcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--S------CAVLQQLLQGS  217 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~--~------~~~~~~~~~~~  217 (331)
                                   ..|+.+|...+.+.+.++.+   .|+++++++|+.+.++........  .      ......+....
T Consensus       171 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (277)
T 2rhc_B          171 -------------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV  237 (277)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHS
T ss_pred             -------------ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcC
Confidence                         37999999999999988765   479999999999988742110000  0      01111111111


Q ss_pred             CCccCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          218 KDTQEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       218 ~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                            ....+++++|+|++++.++..+  ...| .+++.++
T Consensus       238 ------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          238 ------PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             ------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence                  2346899999999999988754  2356 4566554

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.92  E-value=7.4e-24  Score=179.02  Aligned_cols=212  Identities=17%  Similarity=0.093  Sum_probs=151.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc-hhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .++|+||||||+|+||++++++|+++|+ +|++++|+..... .+...      ++.++.+|++|++++.++++      
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQA------GAVALYGDFSCETGIMAFIDLLKTQT   97 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHH------TCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhc------CCeEEECCCCCHHHHHHHHHHHHHhc
Confidence            3457999999999999999999999999 9999999875432 22222      57889999999998887775      


Q ss_pred             -CccEEEEcccCCCCCCCC---CchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 -GCKGVFHVASPCTLEDPV---DPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                       ++|++||+||........   +++...+++|+.++.++++++.    +.+..++|++||..+..+.+..          
T Consensus        98 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~----------  167 (260)
T 3gem_A           98 SSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKH----------  167 (260)
T ss_dssp             SCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSC----------
T ss_pred             CCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCc----------
Confidence             589999999976543222   2235689999999999988774    3456799999998665443322          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                                ..|+.+|...+.+.+.++.+.  ++++.+++||.+.++.....     ..........      ....+.
T Consensus       168 ----------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~-----~~~~~~~~~~------p~~r~~  226 (260)
T 3gem_A          168 ----------IAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA-----AYRANALAKS------ALGIEP  226 (260)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--------------------C------CSCCCC
T ss_pred             ----------HhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH-----HHHHHHHhcC------CCCCCC
Confidence                      379999999999999988765  49999999999988753211     1111111111      123356


Q ss_pred             eHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020110          230 PVKDVAKAQVLLFESPAASG-RYLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~~~g-~~~~~~~  256 (331)
                      .++|+|+++++++......| .+++.++
T Consensus       227 ~~edva~~v~~L~~~~~itG~~i~vdGG  254 (260)
T 3gem_A          227 GAEVIYQSLRYLLDSTYVTGTTLTVNGG  254 (260)
T ss_dssp             CTHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhhCCCCCCCEEEECCC
Confidence            78999999999997666677 4566543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.92  E-value=1.1e-24  Score=184.61  Aligned_cols=220  Identities=14%  Similarity=0.101  Sum_probs=157.4

Q ss_pred             CCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|++|||||+  |+||++++++|+++|+ +|++++|+........++....+ .+.++.+|++|++++.++++      
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45799999999  9999999999999999 99999987642112222111111 47889999999998887775      


Q ss_pred             -CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhCC--CCEEEEeCccceeccCCCCCCccccC
Q 020110           80 -GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 -~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                       ++|+|||+||....        +...+++...+++|+.++.++++++...-  ..++|++||..+..+.+..       
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  157 (261)
T 2wyu_A           85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY-------  157 (261)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC-------
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCc-------
Confidence             68999999997542        22334457789999999999999997651  2589999997554332221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                   ..|+.+|...+.+.+.++.+.   |+++++++|+.++++..... .........+....+      .
T Consensus       158 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~p------~  217 (261)
T 2wyu_A          158 -------------NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI-PGFTKMYDRVAQTAP------L  217 (261)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC-TTHHHHHHHHHHHST------T
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc-cccHHHHHHHHhcCC------C
Confidence                         379999999999999887664   89999999999999864321 112222233322222      2


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ..+.+++|+|++++.++....  ..| .+++.++
T Consensus       218 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  251 (261)
T 2wyu_A          218 RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG  251 (261)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            346789999999999886432  346 4666554

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.92  E-value=2.7e-24  Score=184.48  Aligned_cols=221  Identities=14%  Similarity=0.081  Sum_probs=156.6

Q ss_pred             cCCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .++|+||||||+  |+||++++++|+++|+ +|++++|+........++....+ ++.++.+|++|++++.++++     
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345789999999  9999999999999999 99999987642122222111111 46788999999998887775     


Q ss_pred             --CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhCC---CCEEEEeCccceeccCCCCCCccc
Q 020110           80 --GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRFG---VRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 --~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                        ++|+|||+||....        ....+++...+++|+.++.++++++....   .+++|++||..+..+.+..     
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  171 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHY-----  171 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTT-----
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCc-----
Confidence              68999999997542        22233457789999999999999987652   3699999997554332221     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                     ..|+.+|...+.+.+.++.+   .|+++++++||.+.++..... .........+....+     
T Consensus       172 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~p-----  230 (285)
T 2p91_A          172 ---------------NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI-TGFHLLMEHTTKVNP-----  230 (285)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C-TTHHHHHHHHHHHST-----
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc-cchHHHHHHHHhcCC-----
Confidence                           37999999999999888765   489999999999999864321 112222223222221     


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                       ...+.+++|+|++++.++....  ..| .+++.++
T Consensus       231 -~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          231 -FGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             -TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -CCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence             2346789999999999886432  346 4566544

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.92  E-value=2.3e-24  Score=182.06  Aligned_cols=220  Identities=17%  Similarity=0.107  Sum_probs=158.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEE-ecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +|++|||||+|+||++++++|+++|+ +|++. .|+........+.....+.++.++.+|++|++++.++++       +
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999 98886 666543332222111112278999999999998887775       4


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|++||+||.....    ...+++...+++|+.++.++++++    ++.+..++|++||..++.+.+..           
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-----------  151 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENY-----------  151 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTC-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCc-----------
Confidence            69999999865432    223334678999999999999887    44456799999997654432221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+.   ++++.+++||.+.++....... ............      ....+.
T Consensus       152 ---------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~------p~~r~~  215 (258)
T 3oid_A          152 ---------TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQNT------PAGRMV  215 (258)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHHC------TTSSCB
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhcC------CCCCCc
Confidence                     379999999999999988764   7999999999999886433211 122233332222      235678


Q ss_pred             eHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          230 PVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      +++|+|+++++++....  ..| .+++.++
T Consensus       216 ~~~dva~~v~~L~s~~~~~itG~~i~vdGG  245 (258)
T 3oid_A          216 EIKDMVDTVEFLVSSKADMIRGQTIIVDGG  245 (258)
T ss_dssp             CHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            99999999999887643  456 4566553

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.92  E-value=1.5e-24  Score=184.09  Aligned_cols=221  Identities=14%  Similarity=0.072  Sum_probs=157.6

Q ss_pred             cCCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .++|+||||||+  |+||++++++|+++|+ +|++++|+........++....+ ...++.+|++|++++.++++     
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHHHH
Confidence            345789999999  9999999999999999 99999997622222222111111 34688999999998887775     


Q ss_pred             --CccEEEEcccCCCC--------C-CCCCchhhhhHHHHHHHHHHHHHHHhCC--CCEEEEeCccceeccCCCCCCccc
Q 020110           80 --GCKGVFHVASPCTL--------E-DPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 --~~d~vih~a~~~~~--------~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                        ++|+|||+||....        + ...+++...+++|+.++.++++++...-  ..++|++||..++.+.+..     
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  159 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY-----  159 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT-----
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCc-----
Confidence              57999999997542        1 2334457789999999999999997652  2489999997554332221     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                     ..|+.+|...+.+.+.++.+.   |+++++++||.++++..... .........+..+.+     
T Consensus       160 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~p-----  218 (265)
T 1qsg_A          160 ---------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVTP-----  218 (265)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHST-----
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc-cccHHHHHHHHhcCC-----
Confidence                           379999999999999888664   89999999999999864321 112222333322222     


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                       ...+.+++|+|+++++++....  ..| .+++.++
T Consensus       219 -~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  253 (265)
T 1qsg_A          219 -IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  253 (265)
T ss_dssp             -TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCC
Confidence             2347899999999999886532  346 4566554

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.92  E-value=4.1e-24  Score=183.62  Aligned_cols=239  Identities=18%  Similarity=0.155  Sum_probs=162.8

Q ss_pred             cccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc---------chhhc---CCCCCCCcEEEEEccCCC
Q 020110            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---------SHLFA---LPGAGDANLRVFEADVLD   70 (331)
Q Consensus         3 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~---------~~~~~---~~~~~~~~~~~~~~Dl~~   70 (331)
                      .|...+.|++|||||+|+||++++++|+++|+ +|++++|+....         ..+.+   .....+.++.++.+|++|
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD   82 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC
Confidence            45555678999999999999999999999999 999998863211         01110   000011278999999999


Q ss_pred             chHHHHHhc-------CccEEEEcccCCCCC--CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCC
Q 020110           71 SGAVSRAVE-------GCKGVFHVASPCTLE--DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNP  139 (331)
Q Consensus        71 ~~~~~~~~~-------~~d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~  139 (331)
                      ++++.++++       ++|++||+||.....  ...+++...+++|+.++.++++++...  +..++|++||..++.+..
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~  162 (287)
T 3pxx_A           83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAA  162 (287)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccc
Confidence            998887775       689999999976543  234456788999999999999998765  345899999986655432


Q ss_pred             CCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcC
Q 020110          140 GWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQG  216 (331)
Q Consensus       140 ~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  216 (331)
                      .   .+..|..+..+.      ..|+.+|...+.+.+.++.+.   |+++++++||.+.++.....  ..   .......
T Consensus       163 ~---~~~~~~~~~~~~------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~---~~~~~~~  228 (287)
T 3pxx_A          163 Q---PPGAGGPQGPGG------AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSA--PM---YRQFRPD  228 (287)
T ss_dssp             C---CC-----CHHHH------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSH--HH---HHHHCTT
T ss_pred             c---cccccccCCCcc------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc--ch---hhhhccc
Confidence            2   122222221112      379999999999999888765   89999999999999865321  00   0000000


Q ss_pred             ---CC-------C-ccCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          217 ---SK-------D-TQEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       217 ---~~-------~-~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                         ..       . ........+.+++|+|+++++++...  ...| .+++.++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG  282 (287)
T 3pxx_A          229 LEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG  282 (287)
T ss_dssp             SSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECch
Confidence               00       0 00111267899999999999988643  3456 4566543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=5e-24  Score=179.90  Aligned_cols=216  Identities=14%  Similarity=0.110  Sum_probs=153.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+... ....+...    . .++.+|++|++++.++++       +
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYALGR   77 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 99999998765 33222111    3 688999999988887765       6


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+||......    ..+++...+++|+.++.++++++.    +.+.+++|++||..+.++.+..           
T Consensus        78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-----------  146 (256)
T 2d1y_A           78 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQEN-----------  146 (256)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTB-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCC-----------
Confidence            899999999764321    122346789999999999988774    3456799999998654432221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC--h-hHHHHHHHHcCCCCccCcCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--A-SCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~  226 (331)
                               ..|+.+|...+.+.+.++.+   .++++++++|+.+.++.......  . .......+..      .....
T Consensus       147 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~  211 (256)
T 2d1y_A          147 ---------AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWED------LHALR  211 (256)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHT------TSTTS
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHh------cCCCC
Confidence                     37999999999999988765   48999999999998763110000  0 0000001111      11235


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      .+++++|+|++++.++...  ...| .+++.++
T Consensus       212 ~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG  244 (256)
T 2d1y_A          212 RLGKPEEVAEAVLFLASEKASFITGAILPVDGG  244 (256)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            6899999999999988754  2456 5666554

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.92  E-value=1.1e-23  Score=177.12  Aligned_cols=217  Identities=15%  Similarity=0.142  Sum_probs=145.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+....    ..      ++.++.+|++|++++.++++       +
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~----~~------~~~~~~~D~~d~~~~~~~~~~~~~~~g~   74 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQE----QY------PFATEVMDVADAAQVAQVCQRLLAETER   74 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCSS----CC------SSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhhh----cC------CceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 999999876421    11      46788999999999888875       6


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+||......    ..+++...+++|+.++.++++++    ++.+.+++|++||..+..+.+.            
T Consensus        75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------  142 (250)
T 2fwm_X           75 LDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIG------------  142 (250)
T ss_dssp             CCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC------------
Confidence            899999999754321    22345778999999999999987    4446789999999755433221            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHH-HHHc-CCCCccCcCCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQ-QLLQ-GSKDTQEYHWLG  227 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~  227 (331)
                              ...|+.+|...+.+.+.++.+   .|+++++++|+.++++....... ...... .+.. ............
T Consensus       143 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~  213 (250)
T 2fwm_X          143 --------MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV-SDDAEEQRIRGFGEQFKLGIPLGK  213 (250)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------------
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc-ChhHHHHHHhhhhhcccccCCCCC
Confidence                    137999999999999988766   48999999999999986432100 000000 1100 000000011234


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +.+++|+|++++.++...  ...| .+.+.++
T Consensus       214 ~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (250)
T 2fwm_X          214 IARPQEIANTILFLASDLASHITLQDIVVDGG  245 (250)
T ss_dssp             --CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            789999999999988754  3456 4555543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.92  E-value=1.7e-24  Score=184.50  Aligned_cols=220  Identities=17%  Similarity=0.165  Sum_probs=149.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEE-ecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +|+||||||+|+||++++++|+++|+ +|+++ .|+......+.......+.++.++.+|++|++++.++++       +
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999 98776 444333222221111111278999999999998887775       5


Q ss_pred             ccEEEEcccCCCC-C----CCCCchhhhhHHHHHHHHHHHHHHHhC-------CCCEEEEeCccceeccCCCCCCccccC
Q 020110           81 CKGVFHVASPCTL-E----DPVDPEKELILPAVQGTLNVLEAAKRF-------GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        81 ~d~vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                      +|+|||+||.... .    ...+++...+++|+.++.++++++...       +..+||++||..+.++.+..       
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  177 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQ-------  177 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTT-------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCC-------
Confidence            7999999997653 1    123445778999999999999887543       34589999998666543311       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                  ...|+.+|...+.+.+.++.+.   |+++++++||.+.++.....  ...........+.      ..
T Consensus       178 ------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~------~~  237 (272)
T 4e3z_A          178 ------------YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG--GLPDRAREMAPSV------PM  237 (272)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------CC------TT
T ss_pred             ------------cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc--CChHHHHHHhhcC------Cc
Confidence                        1269999999999998887664   89999999999999864321  1111111211111      23


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ..+.+++|+|++++.++....  ..| .++++++
T Consensus       238 ~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          238 QRAGMPEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            456789999999999986432  346 4566553

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.92  E-value=3.1e-24  Score=184.12  Aligned_cols=218  Identities=16%  Similarity=0.155  Sum_probs=154.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|+||||||+|+||+++++.|+++|+ +|++++|+........+ +..... ++.++.+|++|++++.++++       
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEHK  120 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            357899999999999999999999999 99998887544332211 111112 78899999999999888774       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+||.....    ...+++...+++|+.++.++++++.    +.+.++||++||..++++.+..          
T Consensus       121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------  190 (285)
T 2c07_A          121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ----------  190 (285)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC----------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCC----------
Confidence            589999999976432    1223457789999999888887764    3466799999998665543321          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++.+   .++++++++|+.+.++.....   ............+      ...+
T Consensus       191 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~  251 (285)
T 2c07_A          191 ----------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIP------AGRM  251 (285)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCT------TSSC
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc---CHHHHHHHHhhCC------CCCC
Confidence                      37999999999999888765   389999999999998864321   1122222222211      2358


Q ss_pred             eeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          229 VPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ++++|+|++++.++....  ..| .++++++
T Consensus       252 ~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG  282 (285)
T 2c07_A          252 GTPEEVANLACFLSSDKSGYINGRVFVIDGG  282 (285)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence            999999999999887542  356 4566543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.92  E-value=4.1e-24  Score=182.14  Aligned_cols=221  Identities=15%  Similarity=0.132  Sum_probs=152.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHh--------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAV--------   78 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------   78 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+........ ++..... ++.++.+|++|++++.+++        
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999 9999999764432221 1111112 7889999999999888776        


Q ss_pred             cCccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           79 EGCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        79 ~~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .++|++||+||......    ..+++...+++|+.++.++++++.    +.+.+++|++||..++.+.+..         
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~---------  168 (273)
T 1ae1_A           98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV---------  168 (273)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTC---------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCc---------
Confidence            46899999999754321    223456778899999999999873    3456799999998554332221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCCh---hHHHHHHHHcCCCCccCcC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNA---SCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  224 (331)
                                 ..|+.+|...+.+.+.++.+.   |+++++++||.++++........   .......+....+      
T Consensus       169 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p------  231 (273)
T 1ae1_A          169 -----------SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP------  231 (273)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST------
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC------
Confidence                       379999999999998887654   89999999999999864321110   0111222222111      


Q ss_pred             CCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          225 WLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      ...+.+++|+|++++.++...  ...| .+.+.++
T Consensus       232 ~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  266 (273)
T 1ae1_A          232 MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGG  266 (273)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCC
Confidence            235789999999999888643  2356 4555543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.92  E-value=5.8e-24  Score=178.65  Aligned_cols=219  Identities=15%  Similarity=0.096  Sum_probs=159.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|++|||||+|+||++++++|+++|+ +|+++.|+......+.......+.++.++.+|++|++++.++++       +
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 99999997654433322111111278999999999998887775       4


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+||.....    ...+++...+++|+.++.++++++..    .+..++|++||..+..+.+..           
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  151 (247)
T 3lyl_A           83 IDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQ-----------  151 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC-----------
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc-----------
Confidence            79999999976542    22344577899999999999887643    355689999998665543332           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   .++++++++||.+.++.....   ..........+.      ....+.
T Consensus       152 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------~~~~~~  213 (247)
T 3lyl_A          152 ---------TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL---TDEQKSFIATKI------PSGQIG  213 (247)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS---CHHHHHHHHTTS------TTCCCB
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc---cHHHHHHHhhcC------CCCCCc
Confidence                     37999999999999888765   489999999999998865432   111122222221      245688


Q ss_pred             eHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          230 PVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      +++|+|+++..++....  ..| .+++.++
T Consensus       214 ~~~dva~~i~~l~s~~~~~~tG~~i~vdgG  243 (247)
T 3lyl_A          214 EPKDIAAAVAFLASEEAKYITGQTLHVNGG  243 (247)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCCCcCCccCCEEEECCC
Confidence            99999999999886542  356 4566543

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.92  E-value=1.9e-24  Score=184.78  Aligned_cols=231  Identities=18%  Similarity=0.112  Sum_probs=160.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc---------cchhhcC---CCCCCCcEEEEEccCCCchHH
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---------SSHLFAL---PGAGDANLRVFEADVLDSGAV   74 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~---------~~~~~~~---~~~~~~~~~~~~~Dl~~~~~~   74 (331)
                      .+.|++|||||+|+||++++++|+++|+ +|++++|+...         ...+.+.   ....+.++.++.+|++|++++
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            4568999999999999999999999999 99999886321         1111100   000112789999999999998


Q ss_pred             HHHhc-------CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCC
Q 020110           75 SRAVE-------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWK  142 (331)
Q Consensus        75 ~~~~~-------~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~  142 (331)
                      .++++       ++|++||+||........+++...+++|+.++.++++++...    + ..++|++||..++.+.... 
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  168 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA-  168 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC-
Confidence            88876       689999999987654444556889999999999999987432    2 4689999998664432110 


Q ss_pred             CccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHH-HcCCC
Q 020110          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQL-LQGSK  218 (331)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~-~~~~~  218 (331)
                                .+..     ..|+.+|...+.+.+.++.+.   |+++++++||.+.++.....  .....+... .....
T Consensus       169 ----------~~~~-----~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~  231 (278)
T 3sx2_A          169 ----------DPGS-----VGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE--FTREWLAKMAAATDT  231 (278)
T ss_dssp             ----------SHHH-----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--HHHHHHHHHHHHCC-
T ss_pred             ----------CCCc-----hHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh--hHHHHHhhccchhhh
Confidence                      1111     369999999999999887654   69999999999999875421  111122111 11111


Q ss_pred             C-ccCc-CCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          219 D-TQEY-HWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       219 ~-~~~~-~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      . ..++ ....+++++|+|+++++++...  ...| .+++.++
T Consensus       232 ~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  274 (278)
T 3sx2_A          232 PGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG  274 (278)
T ss_dssp             -CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCC
Confidence            1 1222 1267899999999999988653  3456 4556543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.92  E-value=4.3e-24  Score=179.88  Aligned_cols=219  Identities=18%  Similarity=0.190  Sum_probs=153.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+........+...... ++.++.+|++|++++.++++       +
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPD-QIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccC-ceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            357999999999999999999999999 99999997644332221111112 78999999999998887775       4


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCC-CEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|+|||+||......    ..+++...+++|+.++.++.+++    ++.+. ++||++||..++.+.+..          
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------  152 (251)
T 1zk4_A           83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSL----------  152 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTC----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCC----------
Confidence            899999999754321    22334678999999887766654    44555 789999997654432221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHH-----HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAE-----KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~-----~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                ..|+.+|...+.+.+.++.     ..+++++++||+.++++..... .. .. ... .....    ....
T Consensus       153 ----------~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~-~~-~~~-~~~~~----~~~~  214 (251)
T 1zk4_A          153 ----------GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PG-AE-EAM-SQRTK----TPMG  214 (251)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TT-HH-HHH-TSTTT----CTTS
T ss_pred             ----------ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-Cc-hh-hhH-HHhhc----CCCC
Confidence                      3799999999999988765     4589999999999999854321 10 01 111 01111    1234


Q ss_pred             CceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          227 GAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      .+++++|+|+++..++....  ..| .++++++
T Consensus       215 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  247 (251)
T 1zk4_A          215 HIGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence            58999999999999987542  346 4566553

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.92  E-value=8.9e-25  Score=185.32  Aligned_cols=223  Identities=15%  Similarity=0.173  Sum_probs=158.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||+|+||++++++|+++|+ +|++++|+........+.....+.++.++.+|++|++++.++++       
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999 99999997654333222111111278999999999999887775       


Q ss_pred             CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|++||+|+....     +...+++...+++|+.++.++++++...   +-.++|++||..+..+.+..          
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  157 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKY----------  157 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTC----------
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCcc----------
Confidence            58999999987532     1223445778999999999999876432   12699999998665443321          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC--------hhHHHHHHHHcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGSKDT  220 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~  220 (331)
                                ..|+.+|...+.+.+.++.+   +|+++++++||.++++.......        ...........+.   
T Consensus       158 ----------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  224 (264)
T 3ucx_A          158 ----------GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS---  224 (264)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS---
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC---
Confidence                      37999999999999988866   68999999999999875321000        0011122222222   


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                         ....+.+++|+|+++++++...  ...| .+++.++
T Consensus       225 ---p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  260 (264)
T 3ucx_A          225 ---DLKRLPTEDEVASAILFMASDLASGITGQALDVNCG  260 (264)
T ss_dssp             ---SSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence               2356889999999999988653  3456 4566554

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.92  E-value=2.3e-24  Score=182.81  Aligned_cols=220  Identities=17%  Similarity=0.138  Sum_probs=154.5

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      |...++|++|||||+|+||++++++|+++|+ +|++.+|+........+..  .. ++.++.+|++|++++.++++    
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADL--GK-DVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--CS-SEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--CC-ceEEEEeecCCHHHHHHHHHHHHH
Confidence            4445568999999999999999999999999 9999998765433332211  11 78999999999998888775    


Q ss_pred             ---CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                         ++|++||+||......    ..+++...+++|+.++.++.+++    ++.+..++|++||..++++.+..       
T Consensus        98 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~-------  170 (266)
T 3grp_A           98 EMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQ-------  170 (266)
T ss_dssp             HHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CH-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCc-------
Confidence               6899999999765321    22345778899999977777765    33466799999998665543221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                   ..|+.+|...+.+.+.++.+   .|+++.+++||.+.++.....   .......+....      ..
T Consensus       171 -------------~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~------p~  228 (266)
T 3grp_A          171 -------------TNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL---NEKQKEAIMAMI------PM  228 (266)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC---CHHHHHHHHTTC------TT
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc---CHHHHHHHHhcC------CC
Confidence                         37999999999999888765   489999999999988753221   112222333332      23


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ..+.+++|+|+++++++....  ..| .+++.++
T Consensus       229 ~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3grp_A          229 KRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG  262 (266)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            557889999999999886542  356 4555543

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.92  E-value=1.7e-24  Score=184.99  Aligned_cols=220  Identities=18%  Similarity=0.097  Sum_probs=157.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +|++|||||+|+||++++++|+++|+ +|++++|+........+ +..... ++.++.+|++|++++.++++       .
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999 99999997654333221 111122 79999999999998887775       5


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh------CCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR------FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      +|++||+||.....    ...+++...+++|+.++.++++++..      .+..++|++||..+..+.+..         
T Consensus       102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~---------  172 (279)
T 3sju_A          102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYA---------  172 (279)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTC---------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCC---------
Confidence            79999999976532    12233467788999999999998754      355799999998665433221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCC-------CCC-hhHHHHHHHHcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP-------YLN-ASCAVLQQLLQGSKD  219 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~-------~~~-~~~~~~~~~~~~~~~  219 (331)
                                 ..|+.+|...+.+.+.++.+   +|+++++++||.+.++....       ... ........+....  
T Consensus       173 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  239 (279)
T 3sju_A          173 -----------APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI--  239 (279)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC--
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC--
Confidence                       37999999999999988876   58999999999998864211       000 1112222222222  


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                          ....+.+++|+|+++++++....  ..| .+++.++
T Consensus       240 ----p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  275 (279)
T 3sju_A          240 ----PLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG  275 (279)
T ss_dssp             ----TTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTT
T ss_pred             ----CCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence                23467899999999999887543  456 4566543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.92  E-value=3.6e-24  Score=184.06  Aligned_cols=220  Identities=15%  Similarity=0.111  Sum_probs=159.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+.... ....+.....+.++.++.+|++|++++.++++       
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999 999999876432 11111111112278999999999998887775       


Q ss_pred             CccEEEEcccCCCCC-----CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      ++|++||+||.....     ...+++...+++|+.++.++++++...  ...++|++||..++.+.+..           
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  193 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETL-----------  193 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTC-----------
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCC-----------
Confidence            689999999975432     133445788999999999999998765  34589999998665543332           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+.   |+++.+++||.++++......  .......+..+      .....+.
T Consensus       194 ---------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~------~p~~r~~  256 (291)
T 3ijr_A          194 ---------IDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF--DEKKVSQFGSN------VPMQRPG  256 (291)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS--CHHHHHHTTTT------STTSSCB
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC--CHHHHHHHHcc------CCCCCCc
Confidence                     379999999999999888664   899999999999987532110  01111111111      1345678


Q ss_pred             eHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          230 PVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +++|+|+++++++...  ...| .+++.++
T Consensus       257 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  286 (291)
T 3ijr_A          257 QPYELAPAYVYLASSDSSYVTGQMIHVNGG  286 (291)
T ss_dssp             CGGGTHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CHHHHHHHHHHHhCCccCCCcCCEEEECCC
Confidence            9999999999988654  3456 4555543

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.92  E-value=8.3e-24  Score=180.37  Aligned_cols=219  Identities=14%  Similarity=0.078  Sum_probs=155.0

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ..++|++|||||+|+||++++++|+++|+ +|++++|+........+.....+ ++.++.+|++|++++.++++      
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELS  103 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            34457999999999999999999999999 99999987644332221111112 68889999999998887775      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCC----CEEEEeCccceeccCCCCCCccc
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGV----RRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~----~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                       ++|+|||+||.....    ...+++...+++|+.++.++++++.    +.+.    +++|++||..++.+.+..     
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~-----  178 (276)
T 2b4q_A          104 ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQ-----  178 (276)
T ss_dssp             SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCS-----
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCC-----
Confidence             689999999975432    2233457789999999988888764    2343    799999997554332221     


Q ss_pred             cCCCCCChhhhhccCc-chhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHc--CCCCc
Q 020110          147 DETSWTDLEYCKSRKK-WYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ--GSKDT  220 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~-~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~--~~~~~  220 (331)
                                     . .|+.+|...+.+.+.++.+   .|+++++++|+.+.++....   ........+..  ..   
T Consensus       179 ---------------~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~---  237 (276)
T 2b4q_A          179 ---------------AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH---IANDPQALEADSASI---  237 (276)
T ss_dssp             ---------------CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH---HHHCHHHHHHHHHTS---
T ss_pred             ---------------ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh---cchhHHHHHHhhcCC---
Confidence                           2 7999999999999988765   48999999999998875321   00001111111  11   


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEec
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTN  255 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~  255 (331)
                         ....+.+++|+|++++.++...  ...| .+.+.+
T Consensus       238 ---p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  272 (276)
T 2b4q_A          238 ---PMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDG  272 (276)
T ss_dssp             ---TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ---CCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence               1245789999999999988754  3456 455544

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.92  E-value=6.7e-24  Score=182.79  Aligned_cols=226  Identities=13%  Similarity=0.044  Sum_probs=162.5

Q ss_pred             CcccccCCCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc
Q 020110            2 ASEAEKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus         2 ~~~~~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      ..|+..++|++|||||+|  +||++++++|+++|+ +|++++|+......+.+.....+ .+.++.+|++|++++.++++
T Consensus        23 ~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           23 RTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             CCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHH
T ss_pred             cchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHH
Confidence            334445568999999997  999999999999999 99999998643333332211112 56789999999999888775


Q ss_pred             -------CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhCC--CCEEEEeCccceeccCCCCC
Q 020110           80 -------GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWK  142 (331)
Q Consensus        80 -------~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~  142 (331)
                             ++|++||+||....        +...+++...+++|+.++.++++++...-  ..++|++||..+..+.+.. 
T Consensus       101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~-  179 (296)
T 3k31_A          101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHY-  179 (296)
T ss_dssp             HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT-
T ss_pred             HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCc-
Confidence                   57999999997642        22334567889999999999999987652  3489999998664433221 


Q ss_pred             CccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCC
Q 020110          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (331)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (331)
                                         ..|+.+|...+.+.+.++.+.   |+++++++||.+.++..... ..............+ 
T Consensus       180 -------------------~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p-  238 (296)
T 3k31_A          180 -------------------NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI-SDFHYILTWNKYNSP-  238 (296)
T ss_dssp             -------------------THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC-HHHHHHHHHHHHHST-
T ss_pred             -------------------hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc-cchHHHHHHHHhcCC-
Confidence                               379999999999999887664   89999999999999865331 111222222222222 


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                           ...+..++|+|+++++++...  ...| .+++.++
T Consensus       239 -----~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  273 (296)
T 3k31_A          239 -----LRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCG  273 (296)
T ss_dssp             -----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCC
Confidence                 245678999999999998753  3456 4566543

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.92  E-value=3.1e-24  Score=183.44  Aligned_cols=223  Identities=17%  Similarity=0.181  Sum_probs=147.3

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc--
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   79 (331)
                      |...++|++|||||+|+||++++++|+++|+ +|++++|+... ..... ++..... ++.++.+|++|++++.++++  
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHH
Confidence            3344567899999999999999999999999 99999864322 22111 1111112 78999999999998888776  


Q ss_pred             -----CccEEEEcccCCC--C----CCCCCchhhhhHHHHHHHHHHHHHHHhC----C---CCEEEEeCccceeccCCCC
Q 020110           80 -----GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAAKRF----G---VRRVVVTSSISAIVPNPGW  141 (331)
Q Consensus        80 -----~~d~vih~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~~~~v~~SS~~~~~~~~~~  141 (331)
                           ++|++||+||...  .    +...+++...+++|+.++.++++++...    +   ..++|++||..+..+.+..
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  181 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER  181 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc
Confidence                 6899999999732  1    1233445778999999999998887443    2   4589999998665543332


Q ss_pred             CCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCC
Q 020110          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (331)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (331)
                                          ..|+.+|...+.+.+.++.+   .|+++.+++||.+.++.......   ........+  
T Consensus       182 --------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~--  236 (280)
T 4da9_A          182 --------------------LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG---KYDGLIESG--  236 (280)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------
T ss_pred             --------------------cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch---hHHHHHhhc--
Confidence                                37999999999999988866   58999999999999886432110   001111110  


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                         ......+..++|+|++++.++....  ..| .+++.++
T Consensus       237 ---~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (280)
T 4da9_A          237 ---LVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG  274 (280)
T ss_dssp             --------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTT
T ss_pred             ---CCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence               0123457899999999999987654  456 4555543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.92  E-value=8.7e-24  Score=179.54  Aligned_cols=221  Identities=16%  Similarity=0.122  Sum_probs=154.2

Q ss_pred             ccCCCeEEEeCcchH-HHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            6 EKEEETVCVTGANGF-IGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~-iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      ..++|++|||||+|+ ||++++++|+++|+ +|++++|+........ ++....+.++.++.+|++|++++.++++    
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            345679999999984 99999999999999 9999999765433322 1111122279999999999998887775    


Q ss_pred             ---CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC-----CCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                         .+|+|||+||......    ..++....+++|+.++.++++++...     +..++|++||..+..+.+..      
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------  171 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQ------  171 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTC------
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCC------
Confidence               5799999999755321    23345778999999999999987543     45689999997654433221      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                    ..|+.+|...+.+.+.++.+   .|+++++++||.+.++......  .......+..      ...
T Consensus       172 --------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~------~~~  229 (266)
T 3o38_A          172 --------------SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS--SSELLDRLAS------DEA  229 (266)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------------CCT
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC--cHHHHHHHHh------cCC
Confidence                          37999999999999988866   6899999999999987643211  0111111111      113


Q ss_pred             CCCceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          225 WLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                      ...+.+++|+|+++++++...  ...|. +++.+
T Consensus       230 ~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          230 FGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSS  263 (266)
T ss_dssp             TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             cCCCCCHHHHHHHHHHHcCccccCccCCEEEEcC
Confidence            456789999999999988753  34564 45554

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.92  E-value=7.4e-24  Score=180.05  Aligned_cols=220  Identities=19%  Similarity=0.180  Sum_probs=157.4

Q ss_pred             cccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC-Cccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      ++..+|+||||||+|+||++++++|+++|+ +|+++.++. ....... .+..... ++.++.+|++|++++.++++   
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~   99 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGG-NGRLLSFDVANREQCREVLEHEI   99 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHH
Confidence            344457899999999999999999999999 887765433 2222111 1111122 78999999999998887775   


Q ss_pred             ----CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH-----hCCCCEEEEeCccceeccCCCCCCccc
Q 020110           80 ----GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK-----RFGVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 ----~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                          .+|+|||+||......    ..+++...+++|+.++.++++++.     +.+..++|++||..+.++.+..     
T Consensus       100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  174 (267)
T 4iiu_A          100 AQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQ-----  174 (267)
T ss_dssp             HHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTC-----
T ss_pred             HHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCC-----
Confidence                6899999999765422    234457789999999999999863     4556799999998766554332     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                     ..|+.+|...+.+.+.++.+.   |+++++++||.+.++.....    ...........+     
T Consensus       175 ---------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~p-----  230 (267)
T 4iiu_A          175 ---------------VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMIP-----  230 (267)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTCT-----
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcCC-----
Confidence                           379999999988888877554   89999999999999875432    223333333322     


Q ss_pred             CCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                       ...+.+++|+|+++.+++...  ...| .+++.++
T Consensus       231 -~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          231 -MKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             -TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence             345788999999999988753  3456 4566553

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=5.8e-24  Score=180.81  Aligned_cols=225  Identities=19%  Similarity=0.168  Sum_probs=157.3

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      |..+...++|++|||||+|+||++++++|+++|+ +|++++|++.....+.+...    ++.++.+|++|++++.++++ 
T Consensus         1 M~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~   75 (270)
T 1yde_A            1 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSE   75 (270)
T ss_dssp             ---CCTTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHH
Confidence            5445445568999999999999999999999999 99999987654333322111    57889999999998887775 


Q ss_pred             ------CccEEEEcccCCCCC-----CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCcc
Q 020110           80 ------GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        80 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                            ++|++||+||.....     ...+++...+++|+.++.++++++...   +.+++|++||..+.++.+..    
T Consensus        76 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  151 (270)
T 1yde_A           76 TIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA----  151 (270)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCC----
Confidence                  689999999975421     122334778999999999999987532   24799999997665543321    


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCC---CCChhHHHHHHHHcCCCC
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKD  219 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~  219 (331)
                                      ..|+.+|...+.+.+.++.+   +|+++++++||.++++....   ........+.......+ 
T Consensus       152 ----------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p-  214 (270)
T 1yde_A          152 ----------------VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP-  214 (270)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST-
T ss_pred             ----------------cccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC-
Confidence                            37999999999999988755   58999999999999874211   00001111111111111 


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC-CCCc-eEEEecc
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP-AASG-RYLCTNG  256 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~-~~~g-~~~~~~~  256 (331)
                           ...+..++|+|++++.++... ...| .+.+.++
T Consensus       215 -----~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG  248 (270)
T 1yde_A          215 -----LGRMGQPAEVGAAAVFLASEANFCTGIELLVTGG  248 (270)
T ss_dssp             -----TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             -----CCCCcCHHHHHHHHHHHcccCCCcCCCEEEECCC
Confidence                 234678999999999888642 3456 4555543

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.92  E-value=1.3e-24  Score=184.70  Aligned_cols=223  Identities=14%  Similarity=0.057  Sum_probs=159.5

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ..++|++|||||+|+||++++++|+++|+ +|++++|+........+.....+.++.++.+|++|++++.++++      
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            44568999999999999999999999999 99999887654333221111111278999999999999888776      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|++||+||.....    ...+++...+++|+.++.++.+++..    .+..++|++||..+..+.+..         
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~---------  172 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATV---------  172 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC---------
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCc---------
Confidence             689999999976432    23344577899999999999887643    355789999997665443321         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+   +|+++.+++||.+.++..... .........+....      ....
T Consensus       173 -----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~------p~~r  234 (271)
T 4ibo_A          173 -----------APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQAL-IDNPEFDAWVKART------PAKR  234 (271)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HHCHHHHHHHHHHS------TTCS
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhc-ccCHHHHHHHHhcC------CCCC
Confidence                       37999999999999988866   589999999999998753210 00011222222222      2345


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +..++|+|+++++++...  ...| .+++.++
T Consensus       235 ~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  266 (271)
T 4ibo_A          235 WGKPQELVGTAVFLSASASDYVNGQIIYVDGG  266 (271)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCcEEEECCC
Confidence            778999999999888653  3456 4566553

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=5.2e-24  Score=178.79  Aligned_cols=218  Identities=15%  Similarity=0.098  Sum_probs=154.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh---cCccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV---EGCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~d~v   84 (331)
                      +.|++|||||+|+||++++++|+++|+ +|++++|+......+.+.    . ++.++.+|++|++++.++.   .++|+|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~----~-~~~~~~~D~~~~~~~~~~~~~~~~id~l   78 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKY----P-GIQTRVLDVTKKKQIDQFANEVERLDVL   78 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGS----T-TEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhc----c-CceEEEeeCCCHHHHHHHHHHhCCCCEE
Confidence            357999999999999999999999999 999999976543333221    1 6889999999999887664   468999


Q ss_pred             EEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCChhh
Q 020110           85 FHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (331)
Q Consensus        85 ih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (331)
                      ||+||.....    ...+++...+++|+.++.++++++.    +.+.+++|++||..+..+.+.             +  
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------~--  143 (246)
T 2ag5_A           79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV-------------N--  143 (246)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT-------------T--
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCC-------------C--
Confidence            9999975432    1223456788999999999998874    335679999999755332210             0  


Q ss_pred             hhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCC---ChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          157 CKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                          ...|+.+|...+.+.+.++.+   +|++++++||+.++++......   .........+....      ....+.+
T Consensus       144 ----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  213 (246)
T 2ag5_A          144 ----RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ------KTGRFAT  213 (246)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC------TTSSCEE
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcC------CCCCCCC
Confidence                137999999999999988765   4899999999999997521100   00011122222221      1235789


Q ss_pred             HHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          231 VKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       231 v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      ++|+|++++.++...  ...| .+.+.++
T Consensus       214 ~~dvA~~v~~l~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          214 AEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            999999999988653  2456 4555543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.92  E-value=1.8e-24  Score=183.81  Aligned_cols=220  Identities=18%  Similarity=0.115  Sum_probs=158.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+..............+.++.++.+|++|++++.++++       
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            4467999999999999999999999999 99999997654333221111011167889999999998887775       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|++||+||.....    ...+++...+++|+.++.++++++.    +.+..++|++||..+..+.++.          
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  174 (270)
T 3ftp_A          105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQ----------  174 (270)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc----------
Confidence            689999999976542    2233457789999999999999874    2345689999998665543332          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++.+   .|+++++++||.+.++.....   .......+....      ....+
T Consensus       175 ----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~------p~~r~  235 (270)
T 3ftp_A          175 ----------VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL---PQEQQTALKTQI------PLGRL  235 (270)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS---CHHHHHHHHTTC------TTCSC
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc---CHHHHHHHHhcC------CCCCC
Confidence                      37999999999999888766   589999999999988743211   111122222222      23567


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          229 VPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      .+++|+|+++++++...  ...| .+++.++
T Consensus       236 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  266 (270)
T 3ftp_A          236 GSPEDIAHAVAFLASPQAGYITGTTLHVNGG  266 (270)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCCCcCCccCcEEEECCC
Confidence            89999999999988543  3456 4566553

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.92  E-value=9.2e-24  Score=178.04  Aligned_cols=223  Identities=16%  Similarity=0.127  Sum_probs=160.7

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      |...+.|++|||||+|+||++++++|+++|+ +|++++|+......+.+..  .. ++.++.+|++|++++.++++    
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF--GP-RVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--GG-GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--CC-cceEEEccCCCHHHHHHHHHHHHH
Confidence            3345568999999999999999999999999 9999999765443332211  11 78999999999988887664    


Q ss_pred             ---CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                         ++|++||+||......    ..+++...+++|+.++.++++++...  ...++|++||..+..+.+..         
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  149 (255)
T 4eso_A           79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGM---------  149 (255)
T ss_dssp             HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTB---------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCc---------
Confidence               6899999999765321    33445778999999999999998764  23589999998665443321         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCC-CChh--HHHHHHHHcCCCCccCcC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY-LNAS--CAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~  224 (331)
                                 ..|+.+|...+.+.+.++.+.   |+++++++||.+.++..... ....  ..+........      .
T Consensus       150 -----------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------p  212 (255)
T 4eso_A          150 -----------SVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNIT------P  212 (255)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHS------T
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccC------C
Confidence                       379999999999999888764   89999999999999864321 1111  11111111211      2


Q ss_pred             CCCceeHHHHHHHHHHhhcC-CCCCc-eEEEecc
Q 020110          225 WLGAVPVKDVAKAQVLLFES-PAASG-RYLCTNG  256 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~-~~~~g-~~~~~~~  256 (331)
                      ...+.+++|+|+++++++.. ....| .+++.++
T Consensus       213 ~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG  246 (255)
T 4eso_A          213 MKRNGTADEVARAVLFLAFEATFTTGAKLAVDGG  246 (255)
T ss_dssp             TSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCC
Confidence            34577999999999988864 23456 4566543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.92  E-value=2.2e-24  Score=184.11  Aligned_cols=222  Identities=18%  Similarity=0.115  Sum_probs=155.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHH-CCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|+||||||+|+||++++++|++ .|+ +|++++|+........ ++..... ++.++.+|++|.+++.++++      
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            467999999999999999999999 999 9999999754332221 1110111 68899999999998888776      


Q ss_pred             -CccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHHHhCC--CCEEEEeCccceeccCCCC--------CCc
Q 020110           80 -GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGW--------KGK  144 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~--------~~~  144 (331)
                       ++|+|||+||.......    .++....+++|+.++.++++++....  .+++|++||..++++....        ...
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence             78999999997653221    13346789999999999999997762  2489999998665431110        001


Q ss_pred             cccCCCCCCh-------------hhhhccCcchhHHHHHHHHHHHHHHHH-------cCCeEEEEcCCcccCCCCCCCCC
Q 020110          145 VFDETSWTDL-------------EYCKSRKKWYPVSKTLAEKAAWEFAEK-------HGVDVVAIHPATCLGPLMQPYLN  204 (331)
Q Consensus       145 ~~~E~~~~~~-------------~~~~~~~~~y~~sK~~~e~~~~~~~~~-------~~~~~~~lR~~~v~G~~~~~~~~  204 (331)
                      +++|++....             .....+...|+.+|...+.+.+.++++       .++++++++||.+.++....   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence            1222210000             000012258999999999999887755       58999999999998875321   


Q ss_pred             hhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC----CCCceEEEec
Q 020110          205 ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP----AASGRYLCTN  255 (331)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~----~~~g~~~~~~  255 (331)
                                           ..+.+++|+|++++.++..+    ...|.|+..+
T Consensus       238 ---------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~  271 (276)
T 1wma_A          238 ---------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK  271 (276)
T ss_dssp             ---------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETT
T ss_pred             ---------------------cccCChhHhhhhHhhhhcCcccccccCceEeccC
Confidence                                 23689999999999998754    2356665433

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.91  E-value=4.2e-24  Score=181.34  Aligned_cols=222  Identities=16%  Similarity=0.197  Sum_probs=154.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ..||++|||||+|+||++++++|+++|+ +|+++.|+.... ..+.+.....+.++.++.+|++|++++.++++      
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3478999999999999999999999999 999987765332 22222111111279999999999999888775      


Q ss_pred             -CccEEEEcccCCC--C----CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 -GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 -~~d~vih~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                       ++|+|||+||...  .    +...+++...+++|+.++.++++++    ++.+..++|++||.... ...+.       
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~-------  155 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGAD-SAPGW-------  155 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGG-GCCCC-------
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhc-ccCCC-------
Confidence             6899999999422  1    1123345778999999999999988    55566799999986332 11111       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                           +     ....|+.+|...+.+.+.++.+   .|+++++++||.++++.....   ...........      ...
T Consensus       156 -----~-----~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~------~p~  216 (264)
T 3i4f_A          156 -----I-----YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT---IQEARQLKEHN------TPI  216 (264)
T ss_dssp             -----T-----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC---HHHHHHC-------------
T ss_pred             -----C-----CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc---cHHHHHHHhhc------CCC
Confidence                 0     1137999999999999988866   689999999999999875432   11111111111      123


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ..+.+++|+|++++.++....  ..| +++++++
T Consensus       217 ~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG  250 (264)
T 3i4f_A          217 GRSGTGEDIARTISFLCEDDSDMITGTIIEVTGA  250 (264)
T ss_dssp             -CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCS
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCc
Confidence            457899999999999987543  456 4566543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.91  E-value=4e-24  Score=181.16  Aligned_cols=206  Identities=18%  Similarity=0.091  Sum_probs=146.2

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      |...++|+||||||+|+||++++++|+++|+ +|++++|+..............+.++.++.+|+++++++.++++    
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            3334467999999999999999999999999 99999997655333222111111278999999999998887765    


Q ss_pred             ---CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ---~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                         .+|+|||+||....     ....++....+++|+.++.++++++.    +.+.++||++||..+..+.+..      
T Consensus       103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  176 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADG------  176 (262)
T ss_dssp             HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTC------
T ss_pred             hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCC------
Confidence               48999999997322     12233457789999999999998864    3566799999997654432221      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                    ..|+.+|...+.+.+.++.+   .|+++++++||.+.++......           ..      ..
T Consensus       177 --------------~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~------~~  225 (262)
T 3rkr_A          177 --------------AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS-----------AK------KS  225 (262)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc-----------cc------cc
Confidence                          37999999999999888765   5899999999999876532110           00      01


Q ss_pred             CCCceeHHHHHHHHHHhhcCCCC
Q 020110          225 WLGAVPVKDVAKAQVLLFESPAA  247 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~~~  247 (331)
                      ...++..+|+|++++.++.....
T Consensus       226 ~~~~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          226 ALGAIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             ---CCCHHHHHHHHHHHHTCCTT
T ss_pred             cccCCCHHHHHHHHHHHhcCccc
Confidence            24567999999999999876543

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.91  E-value=9.9e-24  Score=177.35  Aligned_cols=217  Identities=17%  Similarity=0.161  Sum_probs=149.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC-Cccch-hhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.|++|||||+|+||++++++|+++|+ +|++++|+. ..... +...   .. ++.++.+|++|++++.++++      
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNL---GR-RVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHT---TC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhc---CC-cEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999 999999986 33221 2221   12 78899999999998887753      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|+|||+||.....    ...+++...+++|+.++.++++++    ++.+.+++|++||..++.+.+..         
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  151 (249)
T 2ew8_A           81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY---------  151 (249)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSC---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc---------
Confidence             689999999975432    123345678999999988888874    44566899999998654432221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+   .|+++++++||.+.++........  . .......  ..  .....
T Consensus       152 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~-~~~~~~~--~~--~~~~~  213 (249)
T 2ew8_A          152 -----------THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS--A-MFDVLPN--ML--QAIPR  213 (249)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------C--TT--SSSCS
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhcccc--c-hhhHHHH--hh--CccCC
Confidence                       37999999999999988766   489999999999998864311000  0 0000000  00  12245


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +.+++|+|++++.++...  ...| .+.+.++
T Consensus       214 ~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG  245 (249)
T 2ew8_A          214 LQVPLDLTGAAAFLASDDASFITGQTLAVDGG  245 (249)
T ss_dssp             CCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             CCCHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence            789999999999988653  3456 4555543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.91  E-value=3.5e-24  Score=182.20  Aligned_cols=213  Identities=19%  Similarity=0.152  Sum_probs=145.1

Q ss_pred             cccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         3 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      .|+..++|++|||||+|+||++++++|+++|+ +|++++|+........+...  . ++.++.+|++|++++.++++   
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~Dv~d~~~v~~~~~~~~   97 (272)
T 4dyv_A           22 SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIG--D-DALCVPTDVTDPDSVRALFTATV   97 (272)
T ss_dssp             ------CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHT--S-CCEEEECCTTSHHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhC--C-CeEEEEecCCCHHHHHHHHHHHH
Confidence            45545568999999999999999999999999 99999997654333322111  1 78899999999999888875   


Q ss_pred             ----CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHhC----C--CCEEEEeCccceeccCCCCCCc
Q 020110           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF----G--VRRVVVTSSISAIVPNPGWKGK  144 (331)
Q Consensus        80 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~~v~~SS~~~~~~~~~~~~~  144 (331)
                          ++|++||+||....     +...+++...+++|+.++.++++++...    +  ..++|++||..+..+.+..   
T Consensus        98 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~---  174 (272)
T 4dyv_A           98 EKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYS---  174 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTC---
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCc---
Confidence                68999999997543     1223345788999999998888876433    2  3589999998654433221   


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCcc
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (331)
                                       ..|+.+|...+.+.+.++.+   .++++.+++||.+.++........    .....      .
T Consensus       175 -----------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~------~  227 (272)
T 4dyv_A          175 -----------------APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG----VPQAD------L  227 (272)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------
T ss_pred             -----------------hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc----chhhh------h
Confidence                             37999999999999988766   589999999999988753221000    00000      0


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCCCCCc
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESPAASG  249 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~~~~g  249 (331)
                      ......+.+++|+|+++++++..+....
T Consensus       228 ~~~~~~~~~pedvA~~v~fL~s~~~~~~  255 (272)
T 4dyv_A          228 SIKVEPVMDVAHVASAVVYMASLPLDAN  255 (272)
T ss_dssp             --------CHHHHHHHHHHHHHSCTTSC
T ss_pred             cccccCCCCHHHHHHHHHHHhCCCCcCc
Confidence            0123447899999999999998775543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.91  E-value=4.8e-24  Score=180.64  Aligned_cols=220  Identities=17%  Similarity=0.194  Sum_probs=149.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+......+....  .. ++.++.+|++|.+++.++++       
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   82 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEI--GD-AALAVAADISKEADVDAAVEAALSKFG   82 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--CT-TEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh--CC-ceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4567999999999999999999999999 9999999865544333211  11 78999999999998887775       


Q ss_pred             CccEEEEcccCCCCC-----CCCCchhhhhHHHHHHHHHHHHHHHhC----C----CCEEEEeCccceeccCCCCCCccc
Q 020110           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF----G----VRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 ~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~----~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                      ++|++||+||.....     ...++....+++|+.++.++++++...    +    ..++|++||..+..+.+..     
T Consensus        83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----  157 (261)
T 3n74_A           83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNL-----  157 (261)
T ss_dssp             CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTC-----
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCc-----
Confidence            679999999976421     123345678999999999988877433    1    3469999997554432221     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChh-HHHHHHHHcCCCCccC
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS-CAVLQQLLQGSKDTQE  222 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~  222 (331)
                                     ..|+.+|...+.+.+.++.+   .++++++++|+.+.++......... ......+..      .
T Consensus       158 ---------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~------~  216 (261)
T 3n74_A          158 ---------------AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRD------S  216 (261)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhh------c
Confidence                           36999999999999988866   5899999999999988643211100 001111111      1


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      .....+++++|+|++++.++...  ...| .+++.++
T Consensus       217 ~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG  253 (261)
T 3n74_A          217 IPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGG  253 (261)
T ss_dssp             CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCC
Confidence            13456899999999999988643  3456 4566543

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.91  E-value=2.4e-23  Score=176.82  Aligned_cols=213  Identities=17%  Similarity=0.142  Sum_probs=155.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|+||||||+|+||++++++|+++|+ +|++++|+......          .+..+.+|++|++++.++++       
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~----------~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDVN----------VSDHFKIDVTNEEEVKEAVEKTTKKYG   80 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CTT----------SSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhccC----------ceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999 99999987654311          56788999999998888775       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|++||+||......    ..+.+...+++|+.++.++++++..    .+..++|++||..++.+.+..          
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  150 (269)
T 3vtz_A           81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNA----------  150 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC----------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCC----------
Confidence            6899999999765322    2233466788999999999987643    356799999998665433221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCC--------CCChhHHHHHHHHcCCCCcc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQP--------YLNASCAVLQQLLQGSKDTQ  221 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~  221 (331)
                                ..|+.+|...+.+.+.++.+.  ++++++++||.+.++....        ...........+....    
T Consensus       151 ----------~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  216 (269)
T 3vtz_A          151 ----------AAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH----  216 (269)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS----
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC----
Confidence                      379999999999999988776  7999999999998874211        0001112222222221    


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                        ....+.+++|+|+++++++...  ...| .+++.++
T Consensus       217 --p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  252 (269)
T 3vtz_A          217 --PMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG  252 (269)
T ss_dssp             --TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence              2356789999999999988754  3456 4566554

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.91  E-value=4.6e-24  Score=182.57  Aligned_cols=220  Identities=16%  Similarity=0.128  Sum_probs=153.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------   80 (331)
                      +.|+||||||+|+||++++++|+++|+ +|++++|+........+.....+.++.++.+|++|++++.+++++       
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            457999999999999999999999999 999999987543332211100011688999999999988877753       


Q ss_pred             ccEEEEcccCCCC-CCC-----CCchhhhhHHHHHHH----HHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           81 CKGVFHVASPCTL-EDP-----VDPEKELILPAVQGT----LNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        81 ~d~vih~a~~~~~-~~~-----~~~~~~~~~~n~~~~----~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      +|+|||+||.... ...     .+++...+++|+.++    .++++.+++.+.++||++||..+..+...          
T Consensus       112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------  181 (279)
T 3ctm_A          112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIP----------  181 (279)
T ss_dssp             CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-------------
T ss_pred             CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCC----------
Confidence            8999999997643 111     123466889999994    56666666667789999999754332100          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                        .+.      ..|+.+|...|.+.+.++.+.   + ++++++|+.+.++.....   .......+....      ....
T Consensus       182 --~~~------~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~------p~~~  243 (279)
T 3ctm_A          182 --QLQ------APYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA---SKDMKAKWWQLT------PLGR  243 (279)
T ss_dssp             --CCH------HHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC---CHHHHHHHHHHS------TTCS
T ss_pred             --CCc------ccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc---ChHHHHHHHHhC------CccC
Confidence              011      379999999999999988764   6 999999999998864321   112222222111      1235


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +++++|+|+++..++...  ...| .+++.++
T Consensus       244 ~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG  275 (279)
T 3ctm_A          244 EGLTQELVGGYLYLASNASTFTTGSDVVIDGG  275 (279)
T ss_dssp             CBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            789999999999998753  2456 4566553

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.91  E-value=4.3e-23  Score=174.88  Aligned_cols=212  Identities=17%  Similarity=0.126  Sum_probs=153.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .++|+||||||+|+||++++++|+++|+ +|++++|+...          .. ++.++.+|++|++++.++++       
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~----------~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g   73 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG----------EA-KYDHIECDVTNPDQVKASIDHIFKEYG   73 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC----------SC-SSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc----------CC-ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3467999999999999999999999999 99999987654          01 67889999999998887775       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+||......    ..+++...+++|+.++.++++++..    .+.+++|++||..+..+.+.           
T Consensus        74 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  142 (264)
T 2dtx_A           74 SISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKN-----------  142 (264)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTT-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCC-----------
Confidence            6899999999754321    2334577899999999998887753    35679999999755433221           


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHcC--CeEEEEcCCcccCCCCCCCCC----hhH----HHHHHHHcCCCCcc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG--VDVVAIHPATCLGPLMQPYLN----ASC----AVLQQLLQGSKDTQ  221 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~--~~~~~lR~~~v~G~~~~~~~~----~~~----~~~~~~~~~~~~~~  221 (331)
                               ...|+.+|...+.+.+.++.+.+  +++++++||.+.++.......    ...    .....+....    
T Consensus       143 ---------~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  209 (264)
T 2dtx_A          143 ---------ASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEH----  209 (264)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHS----
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcC----
Confidence                     13799999999999998887654  999999999998764211000    000    1111111111    


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                        ....+++++|+|++++.++...  ...| .+.+.++
T Consensus       210 --p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (264)
T 2dtx_A          210 --PMQRIGKPQEVASAVAFLASREASFITGTCLYVDGG  245 (264)
T ss_dssp             --TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence              2345899999999999988754  2456 4555553

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.91  E-value=3.8e-23  Score=180.00  Aligned_cols=231  Identities=19%  Similarity=0.144  Sum_probs=154.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc--hhhcCC---CCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALP---GAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      +|++|||||+|+||++++++|+++|+ +|+++.|+.....  .+..+.   ...+.++.++.+|++|++++.++++    
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999 9999988742211  111110   0011178999999999999888876    


Q ss_pred             ---CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                         ++|+|||+||......    ..++....+++|+.++.++++++    ++.+.+++|++||..+..+....       
T Consensus        84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~-------  156 (324)
T 3u9l_A           84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPY-------  156 (324)
T ss_dssp             HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSS-------
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCc-------
Confidence               7899999999754321    23344678899999999999988    55577899999997554322110       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCC---CCChhHHHHHHHHcCCCCccC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~  222 (331)
                                  ...|+.||...+.+.+.++.+   +|+++++++||.+.++....   ....................+
T Consensus       157 ------------~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (324)
T 3u9l_A          157 ------------LAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLG  224 (324)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHH
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCH
Confidence                        137999999999999988866   58999999999998764321   111111111121111111111


Q ss_pred             c--------CCCCceeHHHHHHHHHHhhcCCCCC-c-eEEEeccccC
Q 020110          223 Y--------HWLGAVPVKDVAKAQVLLFESPAAS-G-RYLCTNGIYQ  259 (331)
Q Consensus       223 ~--------~~~~~v~v~D~a~a~~~~l~~~~~~-g-~~~~~~~~~s  259 (331)
                      +        ...+..+++|+|++++.++..+... . .+.+++....
T Consensus       225 ~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~  271 (324)
T 3u9l_A          225 EEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDG  271 (324)
T ss_dssp             HHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCS
T ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchH
Confidence            1        1123368899999999999877432 2 4566654444

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.91  E-value=2e-24  Score=182.11  Aligned_cols=217  Identities=15%  Similarity=0.136  Sum_probs=134.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+......+.......+.++.++.+|++|++++.++++       
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG   85 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999 99999997654433322111111278899999999998888775       


Q ss_pred             CccEEEEcccCCCC-------CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 GCKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 ~~d~vih~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                      ++|+|||+||....       ....+.+...+++|+.++.++.+++    ++.+..++|++||..++.   .        
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---~--------  154 (253)
T 3qiv_A           86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL---Y--------  154 (253)
T ss_dssp             CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC---C--------
Confidence            68999999997421       1223345778999999977776665    344567899999975431   1        


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                  ...|+.+|...+.+.+.++.+.   ++++++++||.++++......  .......+..+.      ..
T Consensus       155 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~------~~  214 (253)
T 3qiv_A          155 ------------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--PKEMVDDIVKGL------PL  214 (253)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--cHHHHHHHhccC------CC
Confidence                        1269999999999999988775   799999999999998643211  111122222221      22


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~  255 (331)
                      ..+..++|+|++++.++....  ..| .|++++
T Consensus       215 ~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg  247 (253)
T 3qiv_A          215 SRMGTPDDLVGMCLFLLSDEASWITGQIFNVDG  247 (253)
T ss_dssp             -----CCHHHHHHHHHHSGGGTTCCSCEEEC--
T ss_pred             CCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            446678999999999886543  356 565544

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.91  E-value=5.2e-24  Score=180.26  Aligned_cols=221  Identities=18%  Similarity=0.153  Sum_probs=152.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +|++|||||+|+||++++++|+++|+ +|++++|+... ...... +....+.++.++.+|++|++++.++++       
T Consensus         4 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            4 GKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            57999999999999999999999999 99999987654 222211 100001168899999999998887775       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|++||+||.....    ...+++...+++|+.++.++++++.    +.+.+++|++||..++.+.+..          
T Consensus        83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  152 (260)
T 1x1t_A           83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK----------  152 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCC----------
Confidence            689999999975432    1233457789999999999988874    3356799999998654432221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChh--------HHHHHHH-HcCCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNAS--------CAVLQQL-LQGSKD  219 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~--------~~~~~~~-~~~~~~  219 (331)
                                ..|+.+|...+.+.+.++.+.   |+++++++||.+.++.........        ......+ ...   
T Consensus       153 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  219 (260)
T 1x1t_A          153 ----------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK---  219 (260)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHH---
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhcc---
Confidence                      379999999999999887663   899999999999998643211000        0000000 000   


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                         .....+.+++|+|+++++++...  ...| .+++.++
T Consensus       220 ---~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG  256 (260)
T 1x1t_A          220 ---QPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             ---CTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence               12346889999999999988653  2456 4566543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.91  E-value=2.4e-23  Score=175.53  Aligned_cols=214  Identities=17%  Similarity=0.123  Sum_probs=152.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+........+..  .. ++.++.+|++|++++.++++       +
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL--GD-AARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT--GG-GEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--CC-ceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 9999999765433332221  11 68899999999998888776       7


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHH----HHhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|++||+||.....    ...+++...+++|+.++.++.++    +++.+.+++|++||..++.+.+..           
T Consensus        80 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  148 (254)
T 1hdc_A           80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT-----------  148 (254)
T ss_dssp             CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCc-----------
Confidence            89999999975431    12334577899999999855554    445567899999997654432221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCcc-Cc-CCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EY-HWLG  227 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~  227 (331)
                               ..|+.+|...+.+.+.++.+   .|+++++++|+.++++...           .......... .. ....
T Consensus       149 ---------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~~~~~~~~~~p~~~  208 (254)
T 1hdc_A          149 ---------SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA-----------ETGIRQGEGNYPNTPMGR  208 (254)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----------HHTCCCSTTSCTTSTTSS
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccc-----------ccchhHHHHHHhcCCCCC
Confidence                     37999999999999888765   4899999999999887421           0000000000 11 1234


Q ss_pred             ce-eHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          228 AV-PVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       228 ~v-~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +. +++|+|++++.++...  ...| .+.+.++
T Consensus       209 ~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          209 VGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             CB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            67 9999999999988754  2456 4555543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=3.7e-24  Score=183.15  Aligned_cols=221  Identities=14%  Similarity=0.120  Sum_probs=154.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCC---cEEEEEccCCCchHHHHHhc-----
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDA---NLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+........+.....+.   ++.++.+|++|++++.++++     
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            457999999999999999999999999 999999976443322111000111   58899999999998887765     


Q ss_pred             --CccEEEEcccCCCCCC--------CCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccC-CCCCCc
Q 020110           80 --GCKGVFHVASPCTLED--------PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPN-PGWKGK  144 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~-~~~~~~  144 (331)
                        ++|+|||+||......        ..+++...+++|+.++.++++++...    + +++|++||..+..+. +.    
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~----  158 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPD----  158 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCS----
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCc----
Confidence              6899999999754321        22335778999999999999987543    4 799999997553322 11    


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCC-Chh-----HHHHHHHHc
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-NAS-----CAVLQQLLQ  215 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~-~~~-----~~~~~~~~~  215 (331)
                                      ...|+.+|...+.+.+.++.+   +|+++++++||.+.++...... ...     .........
T Consensus       159 ----------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  222 (280)
T 1xkq_A          159 ----------------FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKE  222 (280)
T ss_dssp             ----------------SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT
T ss_pred             ----------------ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHc
Confidence                            137999999999999888754   5899999999999998532110 000     011111111


Q ss_pred             CCCCccCcCCCCceeHHHHHHHHHHhhcCC---CCCc-eEEEecc
Q 020110          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESP---AASG-RYLCTNG  256 (331)
Q Consensus       216 ~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~---~~~g-~~~~~~~  256 (331)
                      .  .    ....+.+++|+|++++.++...   ...| .+++.++
T Consensus       223 ~--~----p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          223 C--I----PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             T--C----TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             C--C----CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence            1  1    1345889999999999988643   3456 4556554

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.91  E-value=1.2e-23  Score=178.41  Aligned_cols=216  Identities=17%  Similarity=0.122  Sum_probs=153.8

Q ss_pred             cccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         3 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      .|...++|++|||||+|+||++++++|+++|+ +|++.+|+.....           ....+.+|+++.+++.++++   
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~~~   89 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPGAVA   89 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHHHH
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHHHH
Confidence            34445568999999999999999999999999 9999988754422           12345799999988776664   


Q ss_pred             ----CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                          ++|++||+||.....    ...+++...+++|+.++.++++++    ++.+..++|++||..++.+.+..      
T Consensus        90 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------  163 (266)
T 3uxy_A           90 AGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGH------  163 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTB------
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCC------
Confidence                689999999976542    223445778899999999999987    45566799999997654433221      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCC----CChhHHHHHHHHcCCCCc
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY----LNASCAVLQQLLQGSKDT  220 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~  220 (331)
                                    ..|+.+|...+.+.+.++.+.   |+++++++||.+.++.....    ..........+....   
T Consensus       164 --------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---  226 (266)
T 3uxy_A          164 --------------ALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV---  226 (266)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS---
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC---
Confidence                          379999999999999888664   89999999999988742110    000111112222221   


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                         ....+.+++|+|+++++++....  ..| .+++.++
T Consensus       227 ---p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3uxy_A          227 ---PLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG  262 (266)
T ss_dssp             ---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence               23567899999999999887543  456 4566543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.91  E-value=4.8e-24  Score=185.52  Aligned_cols=241  Identities=12%  Similarity=0.043  Sum_probs=154.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--CCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .++|+||||||+|+||++++++|+++|+ +|++++|+............  ..+.++.++.+|+++++++.++++     
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            4567999999999999999999999999 99999998654333221110  011168899999999998888775     


Q ss_pred             --CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----------CCCEEEEeCccceeccCCCCCC
Q 020110           80 --GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVPNPGWKG  143 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~SS~~~~~~~~~~~~  143 (331)
                        .+|+|||+||......    ..++....+++|+.++.++++++...          +..++|++||..++.+.+..  
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~--  162 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP--  162 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS--
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC--
Confidence              5799999999754321    23445778999999999999887543          24579999998665543332  


Q ss_pred             ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcC---C
Q 020110          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQG---S  217 (331)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~---~  217 (331)
                                        ..|+.||...+.+.+.++.   ..|+++++++||.|.++....... ....+......   .
T Consensus       163 ------------------~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~  223 (319)
T 3ioy_A          163 ------------------GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDI-RPDALKGEVKPVDKT  223 (319)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------------------------
T ss_pred             ------------------HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccccc-CchhhcccccchhHH
Confidence                              3799999966666665543   358999999999999886432111 00101000000   0


Q ss_pred             CCc-cCcCCCCceeHHHHHHHHHHhhcCCCCCceEEEeccc--cCHHHHHHHHHHhCC
Q 020110          218 KDT-QEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGI--YQFGDFAERVSKLFP  272 (331)
Q Consensus       218 ~~~-~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~~~~--~s~~e~~~~i~~~~~  272 (331)
                      ... ........++++|+|++++.+++.+.   .++..+..  -.+++....+...+|
T Consensus       224 ~~~~~~~~~~~~~~pe~vA~~~~~al~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~  278 (319)
T 3ioy_A          224 AVERLAGVHEFGMEPDVIGARVIEAMKANR---LHIFSHPDHKEELREVFDEIIAEYQ  278 (319)
T ss_dssp             -----CCGGGSSBCHHHHHHHHHHHHHTTC---SEECCCSTTHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHhhhcCCCHHHHHHHHHHHHHcCC---CEEEcCHHHHHHHHHHHHHHHHhhh
Confidence            000 11111223899999999999998753   24444332  234455555555554

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.91  E-value=8.5e-24  Score=179.67  Aligned_cols=222  Identities=17%  Similarity=0.132  Sum_probs=153.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCC-CCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+........+ +... .+.++.++.+|++|++++.++++      
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 99999997644322211 1000 01178899999999998887775      


Q ss_pred             -CccEEEEcccCCCC-C----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 -GCKGVFHVASPCTL-E----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 -~~d~vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                       ++|+|||+||.... .    ...+++...+++|+.++.++.+++    ++.+.+++|++||..+..+.+..        
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  162 (267)
T 1iy8_A           91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQ--------  162 (267)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSB--------
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCC--------
Confidence             68999999997542 1    122345778999999888766654    44467899999997654432221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCC-----CCChhHHHHHHHHcCCCCcc
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP-----YLNASCAVLQQLLQGSKDTQ  221 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~  221 (331)
                                  ..|+.+|...+.+.+.++.+   +|+++++++||.+.++....     ...........+....    
T Consensus       163 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----  226 (267)
T 1iy8_A          163 ------------SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN----  226 (267)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC----
T ss_pred             ------------ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC----
Confidence                        37999999999999888765   48999999999998874211     0000000111222111    


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                        ....+.+++|+|++++.++...  ...| .+.+.++
T Consensus       227 --p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG  262 (267)
T 1iy8_A          227 --PSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG  262 (267)
T ss_dssp             --TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence              1245789999999999988654  3456 4555543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.91  E-value=1.3e-23  Score=176.10  Aligned_cols=200  Identities=15%  Similarity=0.080  Sum_probs=148.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCC------EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYT------SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      .|+||||||+|+||++++++|+++|+.      +|++++|+......+.......+.++.++.+|++|++++.++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            468999999999999999999999974      68888887544332221110111278899999999998887775   


Q ss_pred             ----CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                          ++|+|||+||.....    ...+++...+++|+.++.++++++..    .+.+++|++||..++.+.+.       
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------  154 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH-------  154 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCC-------
Confidence                689999999976432    12334577899999999999998743    35679999999755433221       


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                   ...|+.+|...+.+.+.++.+   .+++++++||+.++++.......            .      .
T Consensus       155 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------------~------~  203 (244)
T 2bd0_A          155 -------------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD------------E------M  203 (244)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS------------T------T
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc------------c------c
Confidence                         137999999999999877653   58999999999999986432100            0      0


Q ss_pred             CCCceeHHHHHHHHHHhhcCCC
Q 020110          225 WLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      ...+++++|+|++++.++..+.
T Consensus       204 ~~~~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          204 QALMMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             cccCCCHHHHHHHHHHHHhCCc
Confidence            1367999999999999997654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.91  E-value=4.6e-24  Score=181.18  Aligned_cols=226  Identities=17%  Similarity=0.197  Sum_probs=157.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch-hhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +.|+||||||+|+||++++++|+++|+ +|++++|+...... ..++....+.++.++.+|++|++++.++++       
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            357899999999999999999999999 99999996544322 111100001178899999999998887765       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .+|+|||+||......    ..+++...+++|+.++.++++++...    + .++||++||..++++.+..       ..
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------~~  164 (265)
T 1h5q_A           92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-------LN  164 (265)
T ss_dssp             SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-------TT
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-------cc
Confidence            3899999999754321    22334677999999999999987543    2 3789999997554432210       00


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                      +..      +...|+.+|...+.+.+.++.+   .+++++++||+.++++.....   ............      ....
T Consensus       165 ~~~------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~------~~~~  229 (265)
T 1h5q_A          165 GSL------TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNI------PLNR  229 (265)
T ss_dssp             EEC------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTC------TTSS
T ss_pred             ccc------cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc---chhHHHHHHhcC------cccC
Confidence            111      1237999999999999988765   489999999999999864321   111222222221      1245


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      +++++|+|++++.++....  ..| .+++.++
T Consensus       230 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  261 (265)
T 1h5q_A          230 FAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  261 (265)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             CCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence            7899999999999887542  345 5666554

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.91  E-value=1.7e-23  Score=178.44  Aligned_cols=222  Identities=15%  Similarity=0.131  Sum_probs=158.9

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ..+.|++|||||+|+||++++++|+++|+ +|++++|+......+.......+.++.++.+|++|++++.++++      
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34568999999999999999999999999 99999997655443322111111278899999999999888876      


Q ss_pred             -CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                       ++|++||+||......    ..+++...+++|+.++.++++++...    + ..++|++||..+..+....        
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~--------  179 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQ--------  179 (276)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSS--------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCC--------
Confidence             6899999999765422    23334667889999999999887543    2 2689999997554332110        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                ....|+.+|...+.+.+.++.+   +++++++++||.+.++.....    ......+....      ...
T Consensus       180 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~----~~~~~~~~~~~------p~~  239 (276)
T 3r1i_A          180 ----------QVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL----ADYHALWEPKI------PLG  239 (276)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG----GGGHHHHGGGS------TTS
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc----hHHHHHHHhcC------CCC
Confidence                      1137999999999999998876   589999999999998864321    11112222221      124


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      .+..++|+|+++++++...  ...| .+++.++
T Consensus       240 r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  272 (276)
T 3r1i_A          240 RMGRPEELTGLYLYLASAASSYMTGSDIVIDGG  272 (276)
T ss_dssp             SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence            5788999999999988753  3456 4566554

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.91  E-value=6.9e-24  Score=179.52  Aligned_cols=222  Identities=14%  Similarity=0.091  Sum_probs=152.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCC-CCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+........+ +... .+.++.++.+|++|++++.++++      
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            457999999999999999999999999 99999997643322211 1000 01168899999999999888876      


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|+|||+||.....    ...+++...+++|+.++.++.+++.    +.+.+++|++||..++.+.+..          
T Consensus        85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  154 (260)
T 2z1n_A           85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDL----------  154 (260)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC----------
Confidence            589999999965431    1233457789999999977777653    4467899999997554332211          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCC------hhH-HH-HHHHHcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN------ASC-AV-LQQLLQGSKDT  220 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~------~~~-~~-~~~~~~~~~~~  220 (331)
                                ..|+.+|...+.+.+.++.+.   |+++++++|+.++++.......      ... .. ...+...    
T Consensus       155 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  220 (260)
T 2z1n_A          155 ----------ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASR----  220 (260)
T ss_dssp             ----------HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------C----
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhc----
Confidence                      379999999999998887654   8999999999999986431100      000 00 0011110    


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                        .....+.+++|+|++++.++...  ...| .+++.++
T Consensus       221 --~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          221 --IPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGG  257 (260)
T ss_dssp             --CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence              12245789999999999988753  3456 4555543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.91  E-value=1.2e-23  Score=179.38  Aligned_cols=220  Identities=13%  Similarity=0.085  Sum_probs=156.4

Q ss_pred             CCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|+||||||+  |+||++++++|+++|+ +|++++|+........++....+ ++.++.+|++|++++.++++      
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35799999999  9999999999999999 99999998752222222211111 46789999999998887775      


Q ss_pred             -CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 -GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 -~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                       ++|++||+||....        +...+++...+++|+.++.++++++...  ...++|++||..+..+.+..       
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  155 (275)
T 2pd4_A           83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHY-------  155 (275)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTC-------
T ss_pred             CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCc-------
Confidence             57999999997542        2223445778999999999999998765  12589999997554332221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                   ..|+.+|...+.+.+.++.+.   |+++++++||.+.++..... .........+....+      .
T Consensus       156 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~  215 (275)
T 2pd4_A          156 -------------NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI-ADFRMILKWNEINAP------L  215 (275)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHST------T
T ss_pred             -------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc-cccHHHHHHHHhcCC------c
Confidence                         379999999999999887664   89999999999999864321 111222222222221      1


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      ..+.+++|+|++++.++...  ...|. +.+.++
T Consensus       216 ~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg  249 (275)
T 2pd4_A          216 RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  249 (275)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            34678999999999988643  23564 455543

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.91  E-value=1.2e-23  Score=176.57  Aligned_cols=217  Identities=17%  Similarity=0.156  Sum_probs=153.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEec-CCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +|++|||||+|+||++++++|+++|+ +|+++.| +........ ++..... ++.++.+|++|++++.++++       
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999 9999988 433222211 1100112 68899999999998888775       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|++||+||.....    ...+++...+++|+.++.++.+++.    +.+.+++|++||..+.++.+..          
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  151 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQ----------  151 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTB----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCC----------
Confidence            689999999975431    1233457789999999887777653    3466899999998665543221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++.+   +|+++++++||.+.++........   .........      ....+
T Consensus       152 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~------p~~~~  212 (246)
T 2uvd_A          152 ----------ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDEN---IKAEMLKLI------PAAQF  212 (246)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTT---HHHHHHHTC------TTCSC
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHH---HHHHHHhcC------CCCCC
Confidence                      37999999999988877654   489999999999998864321111   111222221      12358


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          229 VPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      ++++|+|++++.++...  ...| .+.+.++
T Consensus       213 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  243 (246)
T 2uvd_A          213 GEAQDIANAVTFFASDQSKYITGQTLNVDGG  243 (246)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHcCchhcCCCCCEEEECcC
Confidence            89999999999988653  2356 4555543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.91  E-value=1.3e-23  Score=178.54  Aligned_cols=203  Identities=17%  Similarity=0.155  Sum_probs=152.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCC---CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNN---YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      .+||+||||||+|+||++++++|+++|   + +|++++|+......+.++..... ++.++.+|+++.+++.++++    
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~   96 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHS-NIHILEIDLRNFDAYDKLVADIEG   96 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCT-TEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCC-ceEEEEecCCChHHHHHHHHHHHH
Confidence            457899999999999999999999999   8 99999998765443333211112 78999999999999888876    


Q ss_pred             -----CccEEEEcccCCC-C----CCCCCchhhhhHHHHHHHHHHHHHHHhC----------C-----CCEEEEeCccce
Q 020110           80 -----GCKGVFHVASPCT-L----EDPVDPEKELILPAVQGTLNVLEAAKRF----------G-----VRRVVVTSSISA  134 (331)
Q Consensus        80 -----~~d~vih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~-----~~~~v~~SS~~~  134 (331)
                           ++|+|||+||... .    ....++....+++|+.++.++++++...          +     .++||++||..+
T Consensus        97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  176 (267)
T 1sny_A           97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  176 (267)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence                 7999999999765 1    1223345678999999999999987543          2     468999999755


Q ss_pred             eccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHH
Q 020110          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQ  211 (331)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~  211 (331)
                      +.+.+..           .      +...|+.+|...+.+.+.++.+   .+++++++||+.+.++....          
T Consensus       177 ~~~~~~~-----------~------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------  229 (267)
T 1sny_A          177 SIQGNTD-----------G------GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----------  229 (267)
T ss_dssp             CSTTCCS-----------C------CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT----------
T ss_pred             cccCCCC-----------C------CchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC----------
Confidence            4432110           0      1137999999999999988766   58999999999998765321          


Q ss_pred             HHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC--CCceEE
Q 020110          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (331)
Q Consensus       212 ~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~~  252 (331)
                                    ..++..+|+|+.++.++....  ..|.|+
T Consensus       230 --------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~  258 (267)
T 1sny_A          230 --------------SAPLDVPTSTGQIVQTISKLGEKQNGGFV  258 (267)
T ss_dssp             --------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEE
T ss_pred             --------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEE
Confidence                          134788999999999887542  355553

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.91  E-value=2.7e-24  Score=187.57  Aligned_cols=234  Identities=18%  Similarity=0.188  Sum_probs=165.8

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC----------CCccchhh-cCCCCCCCcEEEEEccCCCch
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP----------GSDSSHLF-ALPGAGDANLRVFEADVLDSG   72 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~----------~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~   72 (331)
                      |...++|++|||||+|+||++++++|+++|+ +|++++|+          ........ ++..... ++.++.+|++|++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~   99 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG-EAVADGSNVADWD   99 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC-EEEEECCCTTSHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCC-cEEEEECCCCCHH
Confidence            3344568999999999999999999999999 99999886          22211111 1111122 7889999999999


Q ss_pred             HHHHHhc-------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhCC----------CCEEEEeCc
Q 020110           73 AVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFG----------VRRVVVTSS  131 (331)
Q Consensus        73 ~~~~~~~-------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~----------~~~~v~~SS  131 (331)
                      ++.++++       ++|++||+||.....    ...+++...+++|+.++.++++++....          -.+||++||
T Consensus       100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS  179 (322)
T 3qlj_A          100 QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS  179 (322)
T ss_dssp             HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Confidence            9887775       689999999976532    2234457789999999999999874331          148999999


Q ss_pred             cceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHH
Q 020110          132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCA  208 (331)
Q Consensus       132 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~  208 (331)
                      ..++.+.+..                    ..|+.+|...+.+.+.++.+   +|+++++++|| +..+.........  
T Consensus       180 ~~~~~~~~~~--------------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~--  236 (322)
T 3qlj_A          180 GAGLQGSVGQ--------------------GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEM--  236 (322)
T ss_dssp             HHHHHCBTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---
T ss_pred             HHHccCCCCC--------------------ccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhh--
Confidence            8665543332                    37999999999999988876   68999999999 7666543221110  


Q ss_pred             HHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEeccc------------------cCHHHHHHHH
Q 020110          209 VLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNGI------------------YQFGDFAERV  267 (331)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~~------------------~s~~e~~~~i  267 (331)
                       ..         .....+.++.++|+|+++++++....  ..| .+++.++.                  .++.|+++.+
T Consensus       237 -~~---------~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~  306 (322)
T 3qlj_A          237 -MA---------TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVV  306 (322)
T ss_dssp             -----------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHH
T ss_pred             -hh---------ccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHH
Confidence             00         11123456789999999999886543  356 45554432                  2678999999


Q ss_pred             HHhCC
Q 020110          268 SKLFP  272 (331)
Q Consensus       268 ~~~~~  272 (331)
                      .+.++
T Consensus       307 ~~~~~  311 (322)
T 3qlj_A          307 ADLLG  311 (322)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            98874

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=4.6e-24  Score=183.85  Aligned_cols=235  Identities=15%  Similarity=0.122  Sum_probs=160.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCC---cEEEEEccCCCchHHHHHhc----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDA---NLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+..............+.   ++.++.+|++|++++.++++    
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            3457999999999999999999999999 999999976443222111000111   58899999999998887775    


Q ss_pred             ---CccEEEEcccCCCCCC------CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccC-CCCCCcc
Q 020110           80 ---GCKGVFHVASPCTLED------PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPN-PGWKGKV  145 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~-~~~~~~~  145 (331)
                         ++|+|||+||......      ..+++...+++|+.++.++++++..    .+ +++|++||..+..+. +.     
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~-----  176 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSG-----  176 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTT-----
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCC-----
Confidence               6899999999754321      2234577899999999999888754    34 799999997553322 11     


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCC-Chh-----HHHHHHHHcC
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-NAS-----CAVLQQLLQG  216 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~-~~~-----~~~~~~~~~~  216 (331)
                                     ...|+.+|...+.+.+.++.+   +|+++++++||.+.++...... ...     ..........
T Consensus       177 ---------------~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
T 1xhl_A          177 ---------------YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC  241 (297)
T ss_dssp             ---------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhc
Confidence                           137999999999999888754   5899999999999987532110 000     0111111111


Q ss_pred             CCCccCcCCCCceeHHHHHHHHHHhhcCC---CCCc-eEEEecc-ccCHHHHHHHHHH
Q 020110          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESP---AASG-RYLCTNG-IYQFGDFAERVSK  269 (331)
Q Consensus       217 ~~~~~~~~~~~~v~v~D~a~a~~~~l~~~---~~~g-~~~~~~~-~~s~~e~~~~i~~  269 (331)
                        .    ....+..++|+|+++++++...   ...| .+.+.++ .....+.+..+.+
T Consensus       242 --~----p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~  293 (297)
T 1xhl_A          242 --I----PVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS  293 (297)
T ss_dssp             --C----TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred             --C----CCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence              1    1245889999999999988644   3556 4566543 3444454443433

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.91  E-value=1.8e-23  Score=176.66  Aligned_cols=214  Identities=21%  Similarity=0.205  Sum_probs=154.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------C
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------G   80 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~   80 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+..+.  .....   . ++.++.+|++|++++.++++      +
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~--~~~~~---~-~~~~~~~D~~~~~~v~~~~~~~~~~g~   79 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGEDV--VADLG---D-RARFAAADVTDEAAVASALDLAETMGT   79 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHHH--HHHTC---T-TEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHHH--HHhcC---C-ceEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            3467999999999999999999999999 999999854322  22221   1 79999999999999888776      7


Q ss_pred             ccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC------------CCCEEEEeCccceeccCCC
Q 020110           81 CKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF------------GVRRVVVTSSISAIVPNPG  140 (331)
Q Consensus        81 ~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~------------~~~~~v~~SS~~~~~~~~~  140 (331)
                      +|++||+||....        ....+++...+++|+.++.++++++...            +..++|++||..+..+.+.
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  159 (257)
T 3tl3_A           80 LRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIG  159 (257)
T ss_dssp             EEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHH
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCC
Confidence            8999999996532        1234456888999999999999987643            2348999999755432211


Q ss_pred             CCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCC
Q 020110          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS  217 (331)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  217 (331)
                                     .     ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.....   ............
T Consensus       160 ---------------~-----~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~  216 (257)
T 3tl3_A          160 ---------------Q-----AAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL---PEEARASLGKQV  216 (257)
T ss_dssp             ---------------H-----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------CHHHHHHHHHTS
T ss_pred             ---------------C-----ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc---cHHHHHHHHhcC
Confidence                           1     37999999999999888765   489999999999998864321   112222222222


Q ss_pred             CCccCcCCCCceeHHHHHHHHHHhhcCCCCCce-EEEec
Q 020110          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR-YLCTN  255 (331)
Q Consensus       218 ~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~-~~~~~  255 (331)
                      +.     ...+.+++|+|+++++++......|. +.+.+
T Consensus       217 ~~-----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdG  250 (257)
T 3tl3_A          217 PH-----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDG  250 (257)
T ss_dssp             SS-----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             CC-----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECC
Confidence            11     14578999999999999988767774 55554

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.91  E-value=2.8e-23  Score=177.15  Aligned_cols=220  Identities=17%  Similarity=0.151  Sum_probs=156.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+...........  .. ++.++.+|++|++++.++++       
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEI--GS-KAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH--CT-TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--CC-ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999 9999998765433332211  11 78899999999998887775       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|++||+||......    ..+++...+++|+.++.++++++.    +.+..++|++||..+..+.+..          
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  170 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADR----------  170 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTB----------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCC----------
Confidence            6899999999765422    223346778899999999888774    3455699999997654332221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCC---CCChhHHHHHHHHcCCCCccCcCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                ..|+.+|...+.+.+.++.+.   |+++.+++||.+.++....   ................      ..
T Consensus       171 ----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~  234 (277)
T 4dqx_A          171 ----------TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARA------VM  234 (277)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTS------TT
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcC------cc
Confidence                      379999999999999887664   8999999999998764110   0000111111122221      23


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ..+.+++|+|+++++++....  ..| .+++.++
T Consensus       235 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  268 (277)
T 4dqx_A          235 DRMGTAEEIAEAMLFLASDRSRFATGSILTVDGG  268 (277)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCc
Confidence            457899999999999886543  456 4566544

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.91  E-value=1.4e-23  Score=177.33  Aligned_cols=222  Identities=18%  Similarity=0.153  Sum_probs=150.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC-CCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~-~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|+++.++ ........ ++..... ++.++.+|++|++++.++++     
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999 99988443 33222211 1111122 78899999999999888775     


Q ss_pred             --CccEEEEcccCCCC-C----CCCCchhhhhHHHHHHHHHHHHHHHhCCC--CEEEEeCcccee-ccCCCCCCccccCC
Q 020110           80 --GCKGVFHVASPCTL-E----DPVDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTSSISAI-VPNPGWKGKVFDET  149 (331)
Q Consensus        80 --~~d~vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~~~-~~~~~~~~~~~~E~  149 (331)
                        ++|++||+||.... .    ...+.+...+++|+.++.++++++.....  .++|++||..+. .+.++.        
T Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~--------  155 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGA--------  155 (259)
T ss_dssp             HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTC--------
T ss_pred             hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCc--------
Confidence              68999999986522 1    12233477899999999999999976632  389999997554 222211        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHHcC--CeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG--VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~--~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                  ..|+.+|...+.+.+.++.+.+  +++.++.||.+.++.......  ......+...      .....
T Consensus       156 ------------~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~------~p~~r  215 (259)
T 3edm_A          156 ------------LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--PEVRERVAGA------TSLKR  215 (259)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC------------------------------C
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--hHHHHHHHhc------CCCCC
Confidence                        3799999999999998887653  999999999998875432110  0111111111      12355


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCc-eEEEecccc
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCTNGIY  258 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~~~  258 (331)
                      +.+++|+|+++++++....  ..| .+++.|+..
T Consensus       216 ~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~  249 (259)
T 3edm_A          216 EGSSEDVAGLVAFLASDDAAYVTGACYDINGGVL  249 (259)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSS
T ss_pred             CcCHHHHHHHHHHHcCccccCccCCEEEECCCcC
Confidence            7899999999999886543  356 467766543

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.91  E-value=3.7e-24  Score=181.64  Aligned_cols=222  Identities=15%  Similarity=0.109  Sum_probs=157.8

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      ..++|++|||||+|+||++++++|+++|+ +|++++|+........+ +....+.++.++.+|++|++++.++++     
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 99999997654333221 100001178999999999998887775     


Q ss_pred             --CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCccccC
Q 020110           80 --GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                        ++|++||+||......    ..+++...+++|+.++.++++++...    + ..++|++||..++.+.+..       
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  168 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDH-------  168 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC-------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCC-------
Confidence              6899999999765321    23335678999999999999887433    2 3589999998664433221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                   ..|+.+|...+.+.+.++.+   +|+++.+++||.+.++....... .......+....      ..
T Consensus       169 -------------~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~------p~  228 (266)
T 4egf_A          169 -------------YAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG-DEAKSAPMIARI------PL  228 (266)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC-SHHHHHHHHTTC------TT
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc-ChHHHHHHHhcC------CC
Confidence                         37999999999999988866   48999999999998874221100 111222222222      23


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCc-eEEEec
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASG-RYLCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~  255 (331)
                      ..+..++|+|+++++++...  ...| .+++.+
T Consensus       229 ~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 4egf_A          229 GRFAVPHEVSDAVVWLASDAASMINGVDIPVDG  261 (266)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCcEEEECC
Confidence            45788999999999988753  3456 455654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.91  E-value=3.5e-23  Score=175.85  Aligned_cols=222  Identities=13%  Similarity=0.128  Sum_probs=160.2

Q ss_pred             cCCCeEEEeCcchH--HHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCC-CCCcEEEEEccCCCchHHHHHhc----
Q 020110            7 KEEETVCVTGANGF--IGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~--iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      .++|++|||||+|+  ||++++++|+++|+ +|+++.|+........++... ...++.++.+|++|++++.++++    
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            44679999999999  99999999999999 999998875433333322111 11168899999999998887775    


Q ss_pred             ---CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhCC--CCEEEEeCccceeccCCCCCCccc
Q 020110           80 ---GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 ---~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                         .+|++||+|+....        +...+.....+++|+.++.++++++...-  -.++|++||..+..+.+..     
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  158 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNY-----  158 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT-----
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCc-----
Confidence               57999999997641        12233446788999999999999987652  3489999998665433221     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                     ..|+.+|...+.+.+.++.+   .|+++++++||.+.++..... .........+....+     
T Consensus       159 ---------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~-----  217 (266)
T 3oig_A          159 ---------------NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGI-SDFNSILKDIEERAP-----  217 (266)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC-TTHHHHHHHHHHHST-----
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc-cchHHHHHHHHhcCC-----
Confidence                           37999999999999888765   379999999999998764432 112223333333221     


Q ss_pred             CCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                       ...+.+++|+|++++.++...  ...| .+.+.++
T Consensus       218 -~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG  252 (266)
T 3oig_A          218 -LRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSG  252 (266)
T ss_dssp             -TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCC
Confidence             245789999999999998753  3456 4555543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.91  E-value=1.8e-23  Score=174.27  Aligned_cols=193  Identities=20%  Similarity=0.173  Sum_probs=137.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +|+||||||+|+||++++++|+++|+ +|++++|+......+.....    ++.++.+|++|.+++.++++       ++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999 99999997654333322111    57889999999988887764       68


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHH----HHhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+||......    ..++....+++|+.++.+++++    +++.+.++||++||..++.+.+.             
T Consensus        80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------  146 (234)
T 2ehd_A           80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKG-------------  146 (234)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTT-------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCC-------------
Confidence            99999999754321    2234577899999999766554    45556789999999755332211             


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                             ...|+.+|...+.+.+.++.+   .|++++++|||.+.++.....            ..       . ..+++
T Consensus       147 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------------~~-------~-~~~~~  199 (234)
T 2ehd_A          147 -------GAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT------------PG-------Q-AWKLK  199 (234)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------------------------------------CC
T ss_pred             -------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc------------cc-------c-cCCCC
Confidence                   137999999999988877654   589999999999977642210            00       0 11579


Q ss_pred             HHHHHHHHHHhhcCCC
Q 020110          231 VKDVAKAQVLLFESPA  246 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~  246 (331)
                      ++|+|++++.++..+.
T Consensus       200 ~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          200 PEDVAQAVLFALEMPG  215 (234)
T ss_dssp             HHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHhCCCc
Confidence            9999999999987653

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.91  E-value=1e-23  Score=177.02  Aligned_cols=218  Identities=19%  Similarity=0.180  Sum_probs=156.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+...........  .. ++.++.+|++|++++.++++       
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASI--GK-KARAIAADISDPGSVKALFAEIQALTG   79 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH--CT-TEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--CC-ceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            3468999999999999999999999999 9999998765433322211  11 78899999999998888775       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCC-CCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      ++|++||+||.....    ...+++...+++|+.++.++.+++    ++.+ ..++|++||.....+.+..         
T Consensus        80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  150 (247)
T 3rwb_A           80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNM---------  150 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTC---------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCc---------
Confidence            689999999976532    123345778999999999998874    4434 5789999998665543332         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+   +|+++++++||.+.++............+....  .      ....
T Consensus       151 -----------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--~------~~~r  211 (247)
T 3rwb_A          151 -----------AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML--Q------AMKG  211 (247)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH--S------SSCS
T ss_pred             -----------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc--c------ccCC
Confidence                       37999999999999888866   589999999999988743211000000011100  1      1344


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          228 AVPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      +..++|+|+++.+++...  ...|. +++.++
T Consensus       212 ~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  243 (247)
T 3rwb_A          212 KGQPEHIADVVSFLASDDARWITGQTLNVDAG  243 (247)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            678999999999988754  34564 455543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.91  E-value=2e-23  Score=176.06  Aligned_cols=212  Identities=17%  Similarity=0.112  Sum_probs=151.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCE-EEEEecCCCc--cchhhcCCCCCCCcEEEEEccCCCc-hHHHHHhc----
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTS-INATVFPGSD--SSHLFALPGAGDANLRVFEADVLDS-GAVSRAVE----   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~-V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~----   79 (331)
                      ++|+||||||+|+||++++++|+++|+ + |++++|+...  ...+.....  +.++.++.+|++|+ +++.++++    
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~~v~~~~r~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINP--KVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCT--TSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-cEEEEEecCchHHHHHHHHHhCC--CceEEEEEEecCCChHHHHHHHHHHHH
Confidence            357999999999999999999999999 6 8888887632  112221111  11688999999998 77777665    


Q ss_pred             ---CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC----C---CCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 ---GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF----G---VRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                         ++|+|||+||...    .+++...+++|+.++.++++++...    +   ..++|++||..++.+.+..        
T Consensus        81 ~~g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  148 (254)
T 1sby_A           81 QLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV--------  148 (254)
T ss_dssp             HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS--------
T ss_pred             hcCCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCc--------
Confidence               6899999999743    3557889999999999999987543    1   3579999997554332221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChh--HHHHHHHHcCCCCccCcC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS--CAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  224 (331)
                                  ..|+.+|...+.+.+.++.+   .++++++++||.+.++.........  .........         
T Consensus       149 ------------~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------  207 (254)
T 1sby_A          149 ------------PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL---------  207 (254)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT---------
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh---------
Confidence                        37999999999999888765   6899999999999987532110000  000111111         


Q ss_pred             CCCceeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020110          225 WLGAVPVKDVAKAQVLLFESPAASG-RYLCTNG  256 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~~~~g-~~~~~~~  256 (331)
                      .....+++|+|++++.++... ..| .|++.++
T Consensus       208 ~~~~~~~~dvA~~i~~~~~~~-~~G~~~~v~gG  239 (254)
T 1sby_A          208 SHPTQTSEQCGQNFVKAIEAN-KNGAIWKLDLG  239 (254)
T ss_dssp             TSCCEEHHHHHHHHHHHHHHC-CTTCEEEEETT
T ss_pred             cCCCCCHHHHHHHHHHHHHcC-CCCCEEEEeCC
Confidence            123458999999999988743 445 5666654

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=4.3e-24  Score=184.94  Aligned_cols=221  Identities=13%  Similarity=0.074  Sum_probs=153.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-C----CCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-L----PGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~----~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+........+ +    ....+.++.++.+|++|++++.++++   
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            457999999999999999999999999 99999997543322111 0    00011278999999999999888775   


Q ss_pred             ----CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                          ++|+|||+||.....    ...+++...+++|+.++.++++++...    +.+++|++||.. .++.+..      
T Consensus        96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~------  168 (303)
T 1yxm_A           96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLA------  168 (303)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTC------
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcc------
Confidence                489999999964421    122334677999999999999987552    346899999974 3322211      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCCh-hHHHHHHHHcCCCCccCc
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNA-SCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~  223 (331)
                                    ..|+.+|...+.+.+.++.+.   |++++++||+.++|+........ ...........      .
T Consensus       169 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------~  228 (303)
T 1yxm_A          169 --------------VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK------I  228 (303)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG------S
T ss_pred             --------------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc------C
Confidence                          269999999999988887664   89999999999999842111110 00001111111      1


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ....+.+++|+|++++.++....  ..| .+++.++
T Consensus       229 p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG  264 (303)
T 1yxm_A          229 PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  264 (303)
T ss_dssp             TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence            22357899999999999886532  456 4566554

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.91  E-value=6.3e-24  Score=183.41  Aligned_cols=218  Identities=17%  Similarity=0.095  Sum_probs=150.1

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ..++|+||||||+|+||++++++|+++|+ +|++++|+........+.....+.++.++.+|++|.+++.++++      
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            34567999999999999999999999999 99999998655433222111111278999999999999888775      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CC-CCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                       ++|+|||+||.....    ...++....+++|+.++.++++++..    .+ ..++|++||..++.+.+..        
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  178 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGL--------  178 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTB--------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCc--------
Confidence             689999999976431    22344577899999999999998743    23 4689999998665443321        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cC--c
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QE--Y  223 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~  223 (331)
                                  ..|+.+|...+.+.+.++.+.   |+++++++||.+.++......  ............+.. ++  .
T Consensus       179 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  244 (301)
T 3tjr_A          179 ------------GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSE--RIRGADYGMSATPEGAFGPLP  244 (301)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHH--HHC------------------
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccc--cccchhhccccChhhhccccc
Confidence                        379999999999998887553   899999999999876421100  000000000000111 11  1


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCC
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      ....+++++|+|++++.++..+.
T Consensus       245 ~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          245 TQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             ----CCCHHHHHHHHHHHHHHTC
T ss_pred             cccCCCCHHHHHHHHHHHHhcCC
Confidence            34568999999999999998653

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.91  E-value=5.7e-24  Score=181.58  Aligned_cols=223  Identities=15%  Similarity=0.077  Sum_probs=158.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+........ ++....+.++.++.+|++|++++.++++      
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999 9999998764432221 1100011178999999999998887775      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|++||+||.....    ...+++...+++|+.++.++++++..    .+..++|++||..+..+.+..         
T Consensus       104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  174 (277)
T 4fc7_A          104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQ---------  174 (277)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTC---------
T ss_pred             CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc---------
Confidence             689999999965431    22344577899999999999998742    345689999998665543332         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+.   |+++.+++||.+.++....................+      ...
T Consensus       175 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p------~~r  237 (277)
T 4fc7_A          175 -----------VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP------LQR  237 (277)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST------TSS
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC------CCC
Confidence                       379999999999999887664   899999999999987421000001122223323222      345


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +..++|+|+++++++...  ...| .+++.++
T Consensus       238 ~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG  269 (277)
T 4fc7_A          238 LGNKTEIAHSVLYLASPLASYVTGAVLVADGG  269 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHcCCccCCcCCCEEEECCC
Confidence            788999999999988743  3456 4566553

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.91  E-value=2.4e-23  Score=172.09  Aligned_cols=203  Identities=15%  Similarity=0.087  Sum_probs=151.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---CccE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKG   83 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   83 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++.+|+..                    +|++|++++.++++   ++|+
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~g~id~   62 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG--------------------LDISDEKSVYHYFETIGAFDH   62 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT--------------------CCTTCHHHHHHHHHHHCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc--------------------cCCCCHHHHHHHHHHhCCCCE
Confidence            3467999999999999999999999999 9999987642                    89999999888875   6899


Q ss_pred             EEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHhCC--CCEEEEeCccceeccCCCCCCccccCCCCCChhh
Q 020110           84 VFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (331)
Q Consensus        84 vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (331)
                      +||+||....     +...+++...+++|+.++.++++++...-  -.++|++||..+..+.+..               
T Consensus        63 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~---------------  127 (223)
T 3uce_A           63 LIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANT---------------  127 (223)
T ss_dssp             EEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTC---------------
T ss_pred             EEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCc---------------
Confidence            9999997632     12233457789999999999999987652  2489999997654432221               


Q ss_pred             hhccCcchhHHHHHHHHHHHHHHHHcC-CeEEEEcCCcccCCCCCCCCChh-HHHHHHHHcCCCCccCcCCCCceeHHHH
Q 020110          157 CKSRKKWYPVSKTLAEKAAWEFAEKHG-VDVVAIHPATCLGPLMQPYLNAS-CAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (331)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~-~~~~~lR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~v~D~  234 (331)
                           ..|+.+|...+.+.+.++.+.+ +++..++||.+.++......... ...........      ....+.+++|+
T Consensus       128 -----~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dv  196 (223)
T 3uce_A          128 -----YVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHL------PVGKVGEASDI  196 (223)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHS------TTCSCBCHHHH
T ss_pred             -----hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcC------CCCCccCHHHH
Confidence                 3799999999999999987764 99999999999998643321111 11222222222      23467899999


Q ss_pred             HHHHHHhhcCCCCCce-EEEecc
Q 020110          235 AKAQVLLFESPAASGR-YLCTNG  256 (331)
Q Consensus       235 a~a~~~~l~~~~~~g~-~~~~~~  256 (331)
                      |++++.++......|. +++.++
T Consensus       197 A~~~~~l~~~~~~tG~~i~vdgG  219 (223)
T 3uce_A          197 AMAYLFAIQNSYMTGTVIDVDGG  219 (223)
T ss_dssp             HHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHHHccCCCCCCcEEEecCC
Confidence            9999999987666774 566543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.91  E-value=2.5e-23  Score=177.99  Aligned_cols=223  Identities=13%  Similarity=0.052  Sum_probs=160.0

Q ss_pred             ccccCCCeEEEeCcchH--HHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--
Q 020110            4 EAEKEEETVCVTGANGF--IGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~--iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   79 (331)
                      |...+.|+||||||+|+  ||++++++|+++|+ +|++++|+. ....+.++....+ ++.++.+|+++++++.++++  
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~   97 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQ-FKDRVEKLCAEFN-PAAVLPCDVISDQEIKDLFVEL   97 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTT-CHHHHHHHHGGGC-CSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCch-HHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHHHH
Confidence            33444689999999977  99999999999999 999999987 2222222211122 67899999999998887775  


Q ss_pred             -----CccEEEEcccCCCCC---------CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCC
Q 020110           80 -----GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWK  142 (331)
Q Consensus        80 -----~~d~vih~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~  142 (331)
                           .+|+|||+||.....         ...+.+...+++|+.++.++++++...   ...++|++||..+..+.+.. 
T Consensus        98 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  176 (280)
T 3nrc_A           98 GKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSY-  176 (280)
T ss_dssp             HHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTT-
T ss_pred             HHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCc-
Confidence                 469999999976431         233445678999999999999987643   34689999998664433221 


Q ss_pred             CccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCC
Q 020110          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (331)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (331)
                                         ..|+.+|...+.+.+.++.+   .|+++.+++||.+.++..... ..............+ 
T Consensus       177 -------------------~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p-  235 (280)
T 3nrc_A          177 -------------------NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGI-SNFKKMLDYNAMVSP-  235 (280)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGC-TTHHHHHHHHHHHST-
T ss_pred             -------------------hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcC-cchHHHHHHHHhcCC-
Confidence                               37999999999999888765   589999999999999865332 112222333322221 


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                           ...+..++|+|++++.++...  ...| .+++.++
T Consensus       236 -----~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG  270 (280)
T 3nrc_A          236 -----LKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG  270 (280)
T ss_dssp             -----TCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCC
Confidence                 245788999999999988753  2456 4566553

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.91  E-value=1.5e-23  Score=179.48  Aligned_cols=221  Identities=17%  Similarity=0.134  Sum_probs=159.2

Q ss_pred             cccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         3 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      .|+..+.|++|||||+|+||++++++|+++|+ +|++++|+......+.+..  .. ++.++.+|++|.+++.++++   
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~--~~-~~~~~~~Dl~~~~~v~~~~~~~~   99 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADEL--GN-RAEFVSTNVTSEDSVLAAIEAAN   99 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--CT-TEEEEECCTTCHHHHHHHHHHHT
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh--CC-ceEEEEcCCCCHHHHHHHHHHHH
Confidence            34455678999999999999999999999999 9999999765443332211  11 78999999999999888775   


Q ss_pred             ---CccEEEEccc-CCCCCC---------CCCchhhhhHHHHHHHHHHHHHHHh----------CCCCEEEEeCccceec
Q 020110           80 ---GCKGVFHVAS-PCTLED---------PVDPEKELILPAVQGTLNVLEAAKR----------FGVRRVVVTSSISAIV  136 (331)
Q Consensus        80 ---~~d~vih~a~-~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~----------~~~~~~v~~SS~~~~~  136 (331)
                         ++|++||+++ ......         ..+.+...+++|+.++.++++++..          .+..++|++||..++.
T Consensus       100 ~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  179 (281)
T 3ppi_A          100 QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE  179 (281)
T ss_dssp             TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred             HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence               4799999944 332211         1122478899999999999998752          2335899999986654


Q ss_pred             cCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHH
Q 020110          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQL  213 (331)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  213 (331)
                      +.+..                    ..|+.+|...+.+.+.++.+.   |+++++++||.+.++.....   ........
T Consensus       180 ~~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~  236 (281)
T 3ppi_A          180 GQIGQ--------------------TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV---GEEALAKF  236 (281)
T ss_dssp             CCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT---CHHHHHHH
T ss_pred             CCCCC--------------------cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc---cHHHHHHH
Confidence            33221                    379999999999988887664   89999999999987643221   11223333


Q ss_pred             HcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCCCce-EEEec
Q 020110          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR-YLCTN  255 (331)
Q Consensus       214 ~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~-~~~~~  255 (331)
                      ....+.     ...+.+++|+|+++++++......|. +++.+
T Consensus       237 ~~~~~~-----~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdG  274 (281)
T 3ppi_A          237 AANIPF-----PKRLGTPDEFADAAAFLLTNGYINGEVMRLDG  274 (281)
T ss_dssp             HHTCCS-----SSSCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             HhcCCC-----CCCCCCHHHHHHHHHHHHcCCCcCCcEEEECC
Confidence            333221     15678999999999999987766774 55554

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.91  E-value=1.5e-23  Score=177.17  Aligned_cols=218  Identities=16%  Similarity=0.157  Sum_probs=156.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEe-cCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.|+||||||+|+||++++++|+++|+ +|++.. |+........ ....... ++.++.+|++|.+++.++++      
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGF-DFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCC-eeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            467999999999999999999999999 998887 4433322211 1111112 78899999999998887775      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|++||+||.....    ...+++...+++|+.++.++++++    ++.+..++|++||..+..+.+..         
T Consensus        90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  160 (256)
T 3ezl_A           90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQ---------  160 (256)
T ss_dssp             CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCC---------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCC---------
Confidence             679999999976532    122345778999999988887776    34466799999998665543332         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+   .++++.+++||.+.++.....   .......+....      ....
T Consensus       161 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------~~~~  220 (256)
T 3ezl_A          161 -----------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATI------PVRR  220 (256)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHHS------TTSS
T ss_pred             -----------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc---CHHHHHHHHhcC------CCCC
Confidence                       37999999999999888766   589999999999988754321   122333333322      2345


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +.+++|+|+++.+++...  ...| .+++.++
T Consensus       221 ~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (256)
T 3ezl_A          221 LGSPDEIGSIVAWLASEESGFSTGADFSLNGG  252 (256)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence            788999999999888643  3456 4566553

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.91  E-value=1.5e-23  Score=175.75  Aligned_cols=212  Identities=17%  Similarity=0.179  Sum_probs=154.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHH-CCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-----Cc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GC   81 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~   81 (331)
                      +||++|||||+|+||++++++|++ .|+ .|++.+|+......          .+.++.+|++|++++.++++     ++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~~~~----------~~~~~~~Dv~~~~~v~~~~~~~~~~~i   71 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSFSAE----------NLKFIKADLTKQQDITNVLDIIKNVSF   71 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCCCCT----------TEEEEECCTTCHHHHHHHHHHTTTCCE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEeccccccccc----------cceEEecCcCCHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999 788 99988886542111          67899999999999988875     68


Q ss_pred             cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhCCC--CEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        82 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      |++||+||.....    ...+++...+++|+.++.++++++.....  .++|++||..+..+.+..              
T Consensus        72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------------  137 (244)
T 4e4y_A           72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNS--------------  137 (244)
T ss_dssp             EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTB--------------
T ss_pred             CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCC--------------
Confidence            9999999975432    22334577899999999999999876522  479999998654433221              


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHH---HcCCeEEEEcCCcccCCCCCCCCCh--------hHHHHHHHHcCCCCccCcC
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~  224 (331)
                            ..|+.+|...+.+.+.++.   .+|+++++++||.+.++........        ............      .
T Consensus       138 ------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p  205 (244)
T 4e4y_A          138 ------FAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEF------P  205 (244)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTS------T
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcC------C
Confidence                  3799999999999998886   4589999999999988742110000        000111111111      2


Q ss_pred             CCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          225 WLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ...+.+++|+|+++++++....  ..| .+++.++
T Consensus       206 ~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  240 (244)
T 4e4y_A          206 LNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGG  240 (244)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHhcCccccccCCeEeECCC
Confidence            3568899999999999987543  456 4555543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.91  E-value=1.7e-23  Score=177.64  Aligned_cols=222  Identities=18%  Similarity=0.146  Sum_probs=154.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC-CCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-GAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+........... ...+.++.++.+|+++++++.++++      
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   97 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3467999999999999999999999999 9999999754432221100 0001168889999999998887775      


Q ss_pred             -CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccc-eeccCCCCCCccccCC
Q 020110           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSIS-AIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~-~~~~~~~~~~~~~~E~  149 (331)
                       ++|+|||+||......    ..+++...+++|+.++.++++++.    +.+.+++|++||.. ...+.+.         
T Consensus        98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~---------  168 (267)
T 1vl8_A           98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN---------  168 (267)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS---------
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCC---------
Confidence             6899999999764321    223346788999999999988773    44668999999975 3222111         


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                 ...|+.+|...+.+.+.++.+   .|+++++++||.+.++..... .........+....+      ..
T Consensus       169 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~  230 (267)
T 1vl8_A          169 -----------ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAV-FSDPEKLDYMLKRIP------LG  230 (267)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHH-HTCHHHHHHHHHTCT------TS
T ss_pred             -----------ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccc-ccChHHHHHHHhhCC------CC
Confidence                       137999999999999988765   489999999999988753210 000111222222211      23


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      .+++++|+|++++.++...  ...|. +.+.++
T Consensus       231 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  263 (267)
T 1vl8_A          231 RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG  263 (267)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCccccCCcCCeEEECCC
Confidence            4789999999999988653  34564 455543

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.91  E-value=3.3e-23  Score=176.59  Aligned_cols=221  Identities=19%  Similarity=0.165  Sum_probs=155.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||+|+||++++++|+++|+ +|++++|+...........  .. ++.++.+|++|++++.++++       
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKI--GC-GAAACRVDVSDEQQIIAMVDACVAAFG  102 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH--CS-SCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc--CC-cceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3457899999999999999999999999 9999999765433322211  11 78899999999998887765       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|++||+||.....    ...+++...+++|+.++.++++++..    .+..++|++||..+..+.+..          
T Consensus       103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~----------  172 (277)
T 3gvc_A          103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGT----------  172 (277)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTB----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCc----------
Confidence            689999999976542    23344577899999999999888743    455789999998664433221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCcc---CcCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHW  225 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  225 (331)
                                ..|+.+|...+.+.+.++.+   +|+++++++||.+.++...........   ....  ....   ....
T Consensus       173 ----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~---~~~~--~~~~~~~~~~~  237 (277)
T 3gvc_A          173 ----------GAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDG---ALGA--GGARSMIARLQ  237 (277)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC-----------CCHHHHHHHHH
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchh---hHHH--Hhhhhhhhccc
Confidence                      37999999999999988765   589999999999998742110000000   0000  0000   0012


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      ..+.+++|+|+++++++...  ...| .+++.++
T Consensus       238 ~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  271 (277)
T 3gvc_A          238 GRMAAPEEMAGIVVFLLSDDASMITGTTQIADGG  271 (277)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCCHHHHHHHHHHHcCCccCCccCcEEEECCc
Confidence            45788999999999998654  3456 4566554

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.91  E-value=1.3e-23  Score=177.65  Aligned_cols=220  Identities=19%  Similarity=0.194  Sum_probs=154.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc--cchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +|++|||||+|+||++++++|+++|+ +|++++|+...  ..... .+..... ++.++.+|++|++++.++++      
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQ-KAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999 99999987654  22211 1111122 78999999999998887775      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----CC-CEEEEeCccceeccCCCCCCccccCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GV-RRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                       ++|++||+||.....    ...+++...+++|+.++.++++++...    +. +++|++||..++.+.+..        
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  151 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPIL--------  151 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTC--------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCc--------
Confidence             689999999975432    123345778999999999999887643    55 799999997654432221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCC--------ChhHHHHHHHHcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--------NASCAVLQQLLQGSK  218 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~--------~~~~~~~~~~~~~~~  218 (331)
                                  ..|+.+|...+.+.+.++.+   .++++++++||.+.++......        .........+.... 
T Consensus       152 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  218 (258)
T 3a28_C          152 ------------SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSI-  218 (258)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTC-
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcC-
Confidence                        37999999999999888765   4899999999999876421000        00001111111111 


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                           ....+.+++|+|+++++++...  ...| .+.+.++
T Consensus       219 -----p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  254 (258)
T 3a28_C          219 -----ALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGG  254 (258)
T ss_dssp             -----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             -----CCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence                 1235789999999999988654  3456 4555543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.91  E-value=1.4e-23  Score=176.60  Aligned_cols=210  Identities=15%  Similarity=0.120  Sum_probs=143.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------C
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------G   80 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~   80 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+..............+.++.++.+|++|++++.++++      +
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            3467999999999999999999999999 99999998765443332111111278999999999999888876      5


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|++||+||.....    ...+++...+++|+.++.++++++.    +.+..++|++||..+..+.++.           
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  152 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGF-----------  152 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTC-----------
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCC-----------
Confidence            79999999976532    2233457789999999999888763    3455789999998665443322           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeE-EEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDV-VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~-~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                               ..|+.+|...+.+.+.++.+   .|+++ .++.||.+.++.......   ........      ..... +
T Consensus       153 ---------~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~---~~~~~~~~------~~~~~-~  213 (252)
T 3h7a_A          153 ---------AAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE---QMFGKDAL------ANPDL-L  213 (252)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------------
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch---hhhhhhhh------cCCcc-C
Confidence                     37999999999999988766   47999 899999998875432100   00001100      11223 8


Q ss_pred             eeHHHHHHHHHHhhcCCCC
Q 020110          229 VPVKDVAKAQVLLFESPAA  247 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~~  247 (331)
                      ..++|+|++++.++..+..
T Consensus       214 ~~pedvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          214 MPPAAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             CCHHHHHHHHHHHHHCCGG
T ss_pred             CCHHHHHHHHHHHHhCchh
Confidence            9999999999999986644

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.91  E-value=3.2e-23  Score=176.18  Aligned_cols=218  Identities=18%  Similarity=0.177  Sum_probs=155.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|+++.++... ...+. ++..... ++.++.+|++|++++.++++     
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3467999999999999999999999999 99988665432 11111 1111122 78899999999998888776     


Q ss_pred             --CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceecc-CCCCCCccccCCC
Q 020110           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVP-NPGWKGKVFDETS  150 (331)
Q Consensus        80 --~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~-~~~~~~~~~~E~~  150 (331)
                        ++|++||+||.....    ...+++...+++|+.++.++++++...  +..++|++||..+... .++          
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~----------  176 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPG----------  176 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTT----------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCC----------
Confidence              689999999976432    223445788999999999999988655  3468999998644322 111          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                ...|+.+|...+.+.+.++.+.   |+++++++||.+.++.........    .......      ....
T Consensus       177 ----------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~----~~~~~~~------~~~r  236 (271)
T 3v2g_A          177 ----------ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHA----EAQRERI------ATGS  236 (271)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSH----HHHHHTC------TTSS
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhH----HHHHhcC------CCCC
Confidence                      1379999999999998887664   899999999999998654321111    1112221      1234


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +..++|+|+++++++...  ...| .+++.++
T Consensus       237 ~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  268 (271)
T 3v2g_A          237 YGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG  268 (271)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence            678999999999988643  3456 4555543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=5.7e-24  Score=180.74  Aligned_cols=229  Identities=16%  Similarity=0.108  Sum_probs=153.8

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCC-CCCcEEEEEccCCCchHHHHHh
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAV   78 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~   78 (331)
                      |..|.  +.|++|||||+|+||++++++|+++|+ +|++++|+........ ++... .+.++.++.+|++|++++.+++
T Consensus         1 M~~m~--~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~   77 (267)
T 2gdz_A            1 MAHMV--NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF   77 (267)
T ss_dssp             -CCCC--TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCccc--CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHH
Confidence            55553  346899999999999999999999999 9999998764332211 11110 0116889999999999888777


Q ss_pred             c-------CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHH----HHHhCC---CCEEEEeCccceeccCCCCCCc
Q 020110           79 E-------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLE----AAKRFG---VRRVVVTSSISAIVPNPGWKGK  144 (331)
Q Consensus        79 ~-------~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~----~~~~~~---~~~~v~~SS~~~~~~~~~~~~~  144 (331)
                      +       ++|+|||+||...    .+++...+++|+.++..+.+    .+++.+   .+++|++||..++.+.+..   
T Consensus        78 ~~~~~~~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---  150 (267)
T 2gdz_A           78 RKVVDHFGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ---  150 (267)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC---
T ss_pred             HHHHHHcCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCC---
Confidence            5       4799999999753    34578899999887665554    444432   5789999997554332211   


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHH-----HHcCCeEEEEcCCcccCCCCCCCCChhHH-----HHHHHH
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA-----EKHGVDVVAIHPATCLGPLMQPYLNASCA-----VLQQLL  214 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~-----~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-----~~~~~~  214 (331)
                                       ..|+.+|...+.+.+.++     ...++++++++||.+.++...........     ....+.
T Consensus       151 -----------------~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  213 (267)
T 2gdz_A          151 -----------------PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIK  213 (267)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHH
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHH
Confidence                             279999999998887642     24689999999999988742110000000     000000


Q ss_pred             cCCCCccCcCCCCceeHHHHHHHHHHhhcCCCCCc-eEEEec-cccCHHH
Q 020110          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG-RYLCTN-GIYQFGD  262 (331)
Q Consensus       215 ~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g-~~~~~~-~~~s~~e  262 (331)
                      .      +.....+++++|+|++++.++......| ++++++ +..++.|
T Consensus       214 ~------~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          214 D------MIKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             H------HHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             H------HhccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence            0      0012357899999999999998766667 565554 4455443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.91  E-value=9.6e-24  Score=179.81  Aligned_cols=228  Identities=14%  Similarity=0.071  Sum_probs=160.3

Q ss_pred             cCCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .+.|+||||||+  |+||++++++|+++|+ +|++++|+......+.++....+ ++.++.+|++|++++.++++     
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG-SELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcC-CcEEEECCCCCHHHHHHHHHHHHHH
Confidence            456899999999  9999999999999999 99999987543333333221122 57889999999999888775     


Q ss_pred             --CccEEEEcccCCCC----C-----CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccc
Q 020110           80 --GCKGVFHVASPCTL----E-----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 --~~d~vih~a~~~~~----~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                        ++|++||+||....    .     ...++....+++|+.++.++++++...  ...++|++||..+..+.+..     
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  164 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNY-----  164 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT-----
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCc-----
Confidence              57999999997642    1     233345778999999999999998765  23479999997665433221     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                     ..|+.+|...+.+.+.++.+   .|+++++++||.+.++..... ..............+     
T Consensus       165 ---------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~-----  223 (271)
T 3ek2_A          165 ---------------NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-KSFGKILDFVESNSP-----  223 (271)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-HHHHHHHHHHHHHST-----
T ss_pred             ---------------cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-cchHHHHHHHHhcCC-----
Confidence                           37999999999999888765   489999999999998865431 112222333333222     


Q ss_pred             CCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEec-cccCHHHH
Q 020110          224 HWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTN-GIYQFGDF  263 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~-~~~s~~e~  263 (331)
                       ...+..++|+|+++++++...  ...| .+++.+ ...++.++
T Consensus       224 -~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~  266 (271)
T 3ek2_A          224 -LKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGM  266 (271)
T ss_dssp             -TSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC
T ss_pred             -cCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhh
Confidence             245788999999999998753  3466 456654 33554444

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.90  E-value=1.8e-23  Score=173.72  Aligned_cols=197  Identities=16%  Similarity=0.067  Sum_probs=143.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc----cEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC----KGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----d~v   84 (331)
                      ||+||||||+|+||++++++|+++|+ +|++++|+............  . ++.++.+|+++.+++.++++++    |+|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~D~~~~~~v~~~~~~~~~~~d~l   76 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLS--N-NVGYRARDLASHQEVEQLFEQLDSIPSTV   76 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCS--S-CCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHh--h-ccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence            67899999999999999999999999 99999998765444433221  1 6889999999999999988764    999


Q ss_pred             EEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhCC---CCEEEEeCccceeccCCCCCCccccCCCCCChhhh
Q 020110           85 FHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRFG---VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (331)
Q Consensus        85 ih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (331)
                      ||+||......    ..+++...+++|+.++.++++++....   ..++|++||..+..+.+..                
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------------  140 (230)
T 3guy_A           77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQE----------------  140 (230)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTC----------------
T ss_pred             EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCC----------------
Confidence            99999754322    223446789999999999999875441   2389999998664433221                


Q ss_pred             hccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHH
Q 020110          158 KSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (331)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  234 (331)
                          ..|+.+|...+.+.+.++.+.   |+++..++||.+.++......           ..      .....+++++|+
T Consensus       141 ----~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~------~~~~~~~~~~dv  199 (230)
T 3guy_A          141 ----STYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG-----------KS------LDTSSFMSAEDA  199 (230)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---------------------------------CCCHHHH
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC-----------CC------CCcccCCCHHHH
Confidence                379999999999999988775   799999999999877532210           00      013467899999


Q ss_pred             HHHHHHhhcCCC
Q 020110          235 AKAQVLLFESPA  246 (331)
Q Consensus       235 a~a~~~~l~~~~  246 (331)
                      |++++.++.++.
T Consensus       200 A~~i~~l~~~~~  211 (230)
T 3guy_A          200 ALMIHGALANIG  211 (230)
T ss_dssp             HHHHHHHCCEET
T ss_pred             HHHHHHHHhCcC
Confidence            999999887553

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.90  E-value=1.1e-22  Score=174.44  Aligned_cols=225  Identities=19%  Similarity=0.146  Sum_probs=157.1

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-------------chhhc---CCCCCCCcEEEEEccCC
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-------------SHLFA---LPGAGDANLRVFEADVL   69 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-------------~~~~~---~~~~~~~~~~~~~~Dl~   69 (331)
                      ..+.|++|||||+|+||++++++|+++|+ +|++++|+....             ..+.+   .....+.++.++.+|++
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            44568999999999999999999999999 999998873211             11111   00111227899999999


Q ss_pred             CchHHHHHhc-------CccEEEEcccCCCCCC-----CCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCcc
Q 020110           70 DSGAVSRAVE-------GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSI  132 (331)
Q Consensus        70 ~~~~~~~~~~-------~~d~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~  132 (331)
                      |++++.++++       ++|++||+||......     ..+++...+++|+.++.++++++...    + ..++|++||.
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV  166 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence            9999887775       6899999999755322     23445778999999999999987543    2 4589999998


Q ss_pred             ceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCC------
Q 020110          133 SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL------  203 (331)
Q Consensus       133 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~------  203 (331)
                      .++.+.+..                    ..|+.+|...+.+.+.++.+   +|+++.+++||.+.++......      
T Consensus       167 ~~~~~~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~  226 (286)
T 3uve_A          167 GGLKAYPHT--------------------GHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFR  226 (286)
T ss_dssp             GGTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHC
T ss_pred             hhccCCCCc--------------------cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhcc
Confidence            665443322                    37999999999999988866   5899999999999998643210      


Q ss_pred             ----ChhHHHHHHHH-cCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          204 ----NASCAVLQQLL-QGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       204 ----~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                          ........... ...     .....+.+++|+|+++++++...  ...| .+++.++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~-----~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  282 (286)
T 3uve_A          227 PDLENPGPDDMAPICQMFH-----TLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG  282 (286)
T ss_dssp             TTSSSCCHHHHHHHHHTTC-----SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccccccchhhHHHHHHhhh-----ccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCc
Confidence                00000000000 000     11156889999999999988653  3456 4556543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.90  E-value=1.7e-23  Score=176.65  Aligned_cols=220  Identities=19%  Similarity=0.185  Sum_probs=153.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +|++|||||+|+||++++++|+++|+ +|++++|+........+ +..... ++.++.+|++|++++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999 99999997644322211 101112 68899999999999888776       6


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|++||+||.....    ...+++...+++|+.++.++++++...    + .+++|++||..+.++.+..          
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  149 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPEL----------  149 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCc----------
Confidence            89999999975431    122334678999999999888876442    4 5799999997665433221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCCh--------hHHHHHHHHcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGSKDT  220 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~  220 (331)
                                ..|+.+|...+.+.+.++.+   +|+++++++||.+.++........        .......+....   
T Consensus       150 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  216 (256)
T 1geg_A          150 ----------AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI---  216 (256)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC---
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcC---
Confidence                      37999999999999888765   489999999999988742110000        000011111111   


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                         ....+.+++|+|++++.++...  ...| .+.+.++
T Consensus       217 ---p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  252 (256)
T 1geg_A          217 ---TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG  252 (256)
T ss_dssp             ---TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ---CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence               1235789999999999988654  3456 4555443

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.90  E-value=3.9e-23  Score=177.70  Aligned_cols=222  Identities=13%  Similarity=0.066  Sum_probs=157.1

Q ss_pred             ccCCCeEEEeCcchH--HHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            6 EKEEETVCVTGANGF--IGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~--iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      ..++|++|||||+|+  ||++++++|+++|+ +|++..|+........++....+ ++.++.+|++|++++.++++    
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG-AFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CceEEECCCCCHHHHHHHHHHHHH
Confidence            345679999999998  99999999999999 99999887432222222211112 68899999999999888775    


Q ss_pred             ---CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccc
Q 020110           80 ---GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 ---~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                         ++|++||+||....        +...+++...+++|+.++.++++++...  ...++|++||..+..+.+..     
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~-----  180 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNY-----  180 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTT-----
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCch-----
Confidence               58999999997641        2233445778999999999999988654  23589999998665433321     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                     ..|+.+|...+.+.+.++.+   +|+++.+++||.+.++..... ..............+     
T Consensus       181 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p-----  239 (293)
T 3grk_A          181 ---------------NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI-GDFRYILKWNEYNAP-----  239 (293)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------CCHHHHHHHHHHHST-----
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc-cchHHHHHHHHhcCC-----
Confidence                           37999999999999988766   489999999999999864322 111222222222221     


Q ss_pred             CCCCceeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                       ...+..++|+|+++++++...  ...|. +++.++
T Consensus       240 -~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (293)
T 3grk_A          240 -LRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG  274 (293)
T ss_dssp             -TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCCHHHHHHHHHHHcCccccCCcceEEEECCC
Confidence             245678999999999988753  34564 566543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=3.2e-23  Score=177.29  Aligned_cols=214  Identities=16%  Similarity=0.185  Sum_probs=146.9

Q ss_pred             cccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCC-CCCcEEEEEccCCCchHHHHHhc---
Q 020110            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      ...++|+||||||+|+||++++++|+++|+ +|++++|+......+.. +... ....+.++.+|++|++++.++++   
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            334567999999999999999999999999 99999997644332221 1000 01168889999999998887775   


Q ss_pred             ----CccEEEEcccCCCCCC----CCCchhhhhHHHHHH----HHHHHHHHHhCCC--CEEEEeCccceeccCCCCCCcc
Q 020110           80 ----GCKGVFHVASPCTLED----PVDPEKELILPAVQG----TLNVLEAAKRFGV--RRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        80 ----~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                          ++|+|||+||......    ..+++...+++|+.+    +..+++.+++.+.  +++|++||..+....+.     
T Consensus       107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~-----  181 (279)
T 1xg5_A          107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL-----  181 (279)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC-----
T ss_pred             HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC-----
Confidence                6899999999754322    223356789999999    6666667777765  79999999754211010     


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH-----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (331)
                             .+.      ..|+.+|...+.+.+.++.+     .++++++++|+.+.++............+...       
T Consensus       182 -------~~~------~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-------  241 (279)
T 1xg5_A          182 -------SVT------HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT-------  241 (279)
T ss_dssp             -------GGG------HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH-------
T ss_pred             -------CCC------chhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhh-------
Confidence                   111      37999999999988877654     47999999999998874210000000001110       


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                        .....+++++|+|++++.++..+.
T Consensus       242 --~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          242 --YEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             --HC---CBCHHHHHHHHHHHHHSCT
T ss_pred             --cccccCCCHHHHHHHHHHHhcCCc
Confidence              012347899999999999998654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.90  E-value=2.9e-23  Score=175.75  Aligned_cols=215  Identities=21%  Similarity=0.173  Sum_probs=155.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+........+...  . ++.++.+|++|++++.++++       .
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALE--A-EAIAVVADVSDPKAVEAVFAEALEEFGR   80 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCC--S-SEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc--C-ceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 99999998654433322211  1 78899999999998887775       4


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhCC--CCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +|++||+||......    ..++....+++|+.++.++++++....  ..++|++||..++ +.+               
T Consensus        81 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~---------------  144 (263)
T 2a4k_A           81 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF---------------  144 (263)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH---------------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC---------------
Confidence            799999999764321    122346788999999999999886542  3589999997543 211               


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                      ..     ..|+.+|...+.+.+.++.+   .|+++++++||.+.++..... .  ...........+      ...+.++
T Consensus       145 ~~-----~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~--~~~~~~~~~~~p------~~~~~~p  210 (263)
T 2a4k_A          145 GL-----AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-P--PWAWEQEVGASP------LGRAGRP  210 (263)
T ss_dssp             HH-----HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-C--HHHHHHHHHTST------TCSCBCH
T ss_pred             Cc-----HHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-C--HHHHHHHHhcCC------CCCCcCH
Confidence            11     37999999998888887755   489999999999999864321 1  122222222221      2347899


Q ss_pred             HHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          232 KDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       232 ~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      +|+|++++.++...  ...|. +.+.++
T Consensus       211 ~dvA~~v~~l~s~~~~~~tG~~i~vdgG  238 (263)
T 2a4k_A          211 EEVAQAALFLLSEESAYITGQALYVDGG  238 (263)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            99999999988754  24564 455544

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.90  E-value=6.1e-23  Score=171.48  Aligned_cols=213  Identities=15%  Similarity=0.165  Sum_probs=150.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +|++|||||+|+||++++++|+++|+ +|++++|+...  ...++      ++.++.+|+++ +++.++++       ++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~------~~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSL------GAVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHH------TCEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhh------CcEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999 99999998654  11222      36788999999 77665543       68


Q ss_pred             cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |++||+||.....    ...+++...+++|+.++.++++++.    +.+.+++|++||..++.+...             
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  138 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGP-------------  138 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCC-------------
Confidence            9999999975432    1233457789999999999988873    346789999999755432200             


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                           .+...|+.+|...+.+.+.++.+.   |++++++||+.+.++..... .........+....      ....+.+
T Consensus       139 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~------p~~~~~~  206 (239)
T 2ekp_A          139 -----VPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPL-RQNPELYEPITARI------PMGRWAR  206 (239)
T ss_dssp             -----SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HTCHHHHHHHHTTC------TTSSCBC
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcc-ccCHHHHHHHHhcC------CCCCCcC
Confidence                 011379999999999998887664   89999999999988753210 00011222222211      1235789


Q ss_pred             HHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          231 VKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       231 v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      ++|+|++++.++...  ...|. +.+.++
T Consensus       207 ~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          207 PEEIARVAAVLCGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence            999999999988653  23564 455543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.90  E-value=2.7e-23  Score=176.94  Aligned_cols=220  Identities=16%  Similarity=0.098  Sum_probs=154.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .++|+||||||+|+||++++++|+++|+ +|+++.|+.... ..+.+.....+.++.++.+|+++++++.++++      
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  105 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD  105 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3457999999999999999999999999 999999854332 22211111111278999999999998887775      


Q ss_pred             -CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|+|||+||......    ..++....+++|+.++.++++++..    .+..++|++||..+..+.++.         
T Consensus       106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  176 (271)
T 4iin_A          106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQ---------  176 (271)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC---------
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCc---------
Confidence             6899999999765421    2334577899999999998887643    356799999998665543322         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+   .++++++++||.+.++......   ........      .......
T Consensus       177 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~------~~~~~~~  236 (271)
T 4iin_A          177 -----------TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK---DELKADYV------KNIPLNR  236 (271)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------CG------GGCTTCS
T ss_pred             -----------hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc---HHHHHHHH------hcCCcCC
Confidence                       37999999999999988766   5899999999999887543210   00000101      1113456


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      +.+++|+|+++..++....  ..| .+++.++
T Consensus       237 ~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG  268 (271)
T 4iin_A          237 LGSAKEVAEAVAFLLSDHSSYITGETLKVNGG  268 (271)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCC
Confidence            8899999999999887543  456 4555543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=1.6e-23  Score=178.45  Aligned_cols=199  Identities=14%  Similarity=0.064  Sum_probs=147.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .++|+||||||+|+||++++++|+++|+ +|++++|+......+.+ +..... ++.++.+|++|++++.++++      
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            3457999999999999999999999999 99999997644332211 111112 78999999999998887775      


Q ss_pred             -CccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|+|||+||.......    .++....+++|+.++.++++++.    +.+.++||++||..++.+.+           
T Consensus       107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------  175 (272)
T 1yb1_A          107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP-----------  175 (272)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH-----------
T ss_pred             CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC-----------
Confidence             68999999997653221    12346789999999888777663    45678999999975543211           


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc------CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH------GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~------~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                         +.      ..|+.+|...+.+.+.++.+.      ++++++++|+.+.++....  ..     .            .
T Consensus       176 ---~~------~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~--~~-----~------------~  227 (272)
T 1yb1_A          176 ---FL------LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--PS-----T------------S  227 (272)
T ss_dssp             ---HH------HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--TH-----H------------H
T ss_pred             ---Cc------hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--cc-----c------------c
Confidence               11      379999999999999887653      8999999999998876321  00     0            1


Q ss_pred             CCCceeHHHHHHHHHHhhcCCC
Q 020110          225 WLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      ...+++++|+|++++.++..+.
T Consensus       228 ~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          228 LGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HCCCCCHHHHHHHHHHHHHTTC
T ss_pred             ccCCCCHHHHHHHHHHHHHcCC
Confidence            2357899999999999997653

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.90  E-value=2e-22  Score=168.89  Aligned_cols=213  Identities=19%  Similarity=0.171  Sum_probs=154.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+........+..     ++.++.+|++|++++.++++       +
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHLGR   77 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc-----CCEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 9999999765433332211     36788999999998887765       4


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|++||+||.....    ...+++...+++|+.++.++.+++..    .+.+++|++||.. .++.+..           
T Consensus        78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~-----------  145 (245)
T 1uls_A           78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQ-----------  145 (245)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTC-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCc-----------
Confidence            89999999975432    12234567899999999999887754    3567899999975 5443221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   .|+++++++||.+.++..... .  ...........+      ...+.
T Consensus       146 ---------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~--~~~~~~~~~~~p------~~~~~  207 (245)
T 1uls_A          146 ---------ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-P--EKVREKAIAATP------LGRAG  207 (245)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-C--HHHHHHHHHTCT------TCSCB
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-C--HHHHHHHHhhCC------CCCCc
Confidence                     37999999999988887755   489999999999988864321 1  112222222211      12478


Q ss_pred             eHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          230 PVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      +++|+|++++.++...  ...|. +.+.++
T Consensus       208 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  237 (245)
T 1uls_A          208 KPLEVAYAALFLLSDESSFITGQVLFVDGG  237 (245)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            9999999999988753  24564 455543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.90  E-value=3.1e-23  Score=178.49  Aligned_cols=221  Identities=17%  Similarity=0.128  Sum_probs=155.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc--cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++..|+...  ...+.+.....+.++.++.+|++|++++.++++      
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999999 99998876321  111111111111278899999999998887764      


Q ss_pred             -CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHhCCC--CEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 -~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                       ++|++||+||....     +...+++...+++|+.++.++++++.....  .++|++||..++.+.+..          
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~----------  196 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHL----------  196 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTC----------
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCc----------
Confidence             68999999997542     123344578899999999999999976633  489999998665433221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++.+.   |+++++++||.|.++....... .......      .........+
T Consensus       197 ----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-~~~~~~~------~~~~~p~~r~  259 (294)
T 3r3s_A          197 ----------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ-TQDKIPQ------FGQQTPMKRA  259 (294)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTS-CGGGSTT------TTTTSTTSSC
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCC-CHHHHHH------HHhcCCCCCC
Confidence                      379999999999999888664   8999999999999875211000 0000000      0011133557


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          229 VPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      ..++|+|+++++++...  ...| ++++.++
T Consensus       260 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  290 (294)
T 3r3s_A          260 GQPAELAPVYVYLASQESSYVTAEVHGVCGG  290 (294)
T ss_dssp             BCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            88999999999988654  2456 4566543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.90  E-value=3.2e-23  Score=175.13  Aligned_cols=225  Identities=14%  Similarity=0.075  Sum_probs=144.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC----ccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG----CKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~d~v   84 (331)
                      ||+||||||+|+||++++++|+++|+ +|++++|+......          .   +.+|+++.+++.+++++    +|+|
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~----------~---~~~Dl~~~~~v~~~~~~~~~~id~l   66 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA----------D---LSTAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC----------C---TTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc----------c---cccCCCCHHHHHHHHHHhCCCCCEE
Confidence            57899999999999999999999999 99999997654211          1   56899999999988864    5999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCC--CCccccCCCCCChh---
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLE---  155 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~--~~~~~~E~~~~~~~---  155 (331)
                      ||+||....   ...+...+++|+.++.++++++.    +.+.+++|++||..++......  ....+.+.+.....   
T Consensus        67 v~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (257)
T 1fjh_A           67 VLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIV  143 (257)
T ss_dssp             EECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHH
T ss_pred             EECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhh
Confidence            999997541   23478899999999999999875    4456899999998554221110  00001111100000   


Q ss_pred             ---hhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          156 ---YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       156 ---~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                         ........|+.+|...+.+.+.++++   .|+++++++||.+.++.......  ..........    .......++
T Consensus       144 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~----~~~~~~~~~  217 (257)
T 1fjh_A          144 EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ--DPRYGESIAK----FVPPMGRRA  217 (257)
T ss_dssp             HTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------------CCCSTTSCC
T ss_pred             hcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhcc--chhHHHHHHh----cccccCCCC
Confidence               00001237999999999999887755   58999999999999886432100  0000111110    011123578


Q ss_pred             eHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          230 PVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      +++|+|++++.++..+  ...|. +.+.++
T Consensus       218 ~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          218 EPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            9999999999998764  34564 455554

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.90  E-value=1.4e-22  Score=170.14  Aligned_cols=208  Identities=21%  Similarity=0.143  Sum_probs=148.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+.....           .+..+.+|++|++++.++++       +
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----------~~~~~~~D~~~~~~~~~~~~~~~~~~g~   81 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPK-----------GLFGVEVDVTDSDAVDRAFTAVEEHQGP   81 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCT-----------TSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHH-----------HhcCeeccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999 9999999764322           22247899999998887765       5


Q ss_pred             ccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|++||+||....    +...+++...+++|+.++.++++++.    +.+.+++|++||..++++.+..           
T Consensus        82 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  150 (247)
T 1uzm_A           82 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ-----------  150 (247)
T ss_dssp             CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CC-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCC-----------
Confidence            7999999997543    12234457889999999999998774    3466799999998665443221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   +|+++++++|+.+.++.....   ............      ....+.
T Consensus       151 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------p~~~~~  212 (247)
T 1uzm_A          151 ---------ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQFI------PAKRVG  212 (247)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---CHHHHHHHGGGC------TTCSCB
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc---CHHHHHHHHhcC------CCCCCc
Confidence                     37999999999999888765   589999999999987642110   011111111111      124578


Q ss_pred             eHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          230 PVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +++|+|+++++++...  ...| .+.+.++
T Consensus       213 ~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          213 TPAEVAGVVSFLASEDASYISGAVIPVDGG  242 (247)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence            9999999999988753  2356 4555543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.90  E-value=8.4e-24  Score=180.17  Aligned_cols=223  Identities=15%  Similarity=0.066  Sum_probs=156.3

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------C
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------G   80 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~   80 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++.+|+..............+.++.++.+|++|.+++.++++      +
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4568999999999999999999999999 99999998765444332111111278999999999988887775      6


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|++||+||.....    ...+++...+++|+.++.++++++    ++.+..++|++||..+..+.+.            
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~------------  177 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSV------------  177 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC------------
Confidence            89999999975432    223445778999999999999987    3345679999999755432111            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                              ...|+.+|...+.+.+.++.+.   |+++++++||.+.++.....................     ....+.
T Consensus       178 --------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-----p~~r~~  244 (275)
T 4imr_A          178 --------VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN-----WMGRAG  244 (275)
T ss_dssp             --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS-----TTCSCB
T ss_pred             --------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC-----ccCCCc
Confidence                    1269999999999999888664   899999999999876421100000111111111110     123467


Q ss_pred             eHHHHHHHHHHhhcCC--CCCc-eEEEec
Q 020110          230 PVKDVAKAQVLLFESP--AASG-RYLCTN  255 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~--~~~g-~~~~~~  255 (331)
                      .++|+|+++++++...  ...| .+++.|
T Consensus       245 ~pedvA~~v~fL~s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          245 RPEEMVGAALFLASEACSFMTGETIFLTG  273 (275)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             CHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence            7899999999988754  3456 445544

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.90  E-value=5.4e-23  Score=174.86  Aligned_cols=219  Identities=17%  Similarity=0.171  Sum_probs=154.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhh-cCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++.+|+.... .... ....... ++.++.+|++|++++.++++      
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGR-DFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999 999988544321 1111 1111112 78999999999998887775      


Q ss_pred             -CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|++||+||......    ..+++...+++|+.++.++++++..    .+..++|++||..+..+.+..         
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  172 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQ---------  172 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB---------
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCc---------
Confidence             6899999999765321    2334577899999999999888743    355789999998665543321         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+   .|+++++++||.+.++.......   .    .... ..........
T Consensus       173 -----------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~----~~~~-~~~~~~~~~~  233 (269)
T 3gk3_A          173 -----------ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ---D----VLEA-KILPQIPVGR  233 (269)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------------C-CSGGGCTTSS
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch---h----HHHH-HhhhcCCcCC
Confidence                       37999999999999888765   48999999999999886432100   0    0000 0111113455


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      +.+++|+|+++++++....  ..| .+++.++
T Consensus       234 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG  265 (269)
T 3gk3_A          234 LGRPDEVAALIAFLCSDDAGFVTGADLAINGG  265 (269)
T ss_dssp             CBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             ccCHHHHHHHHHHHhCCCcCCeeCcEEEECCC
Confidence            7899999999999887653  456 4566543

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.90  E-value=4.3e-23  Score=173.93  Aligned_cols=216  Identities=18%  Similarity=0.132  Sum_probs=153.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      |++|||||+|+||++++++|+++|  + .|++..|+......+.+..  .. ++.++.+|++|++++.++++       +
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~--~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKY--GD-RFFYVVGDITEDSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHH--GG-GEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHh--CC-ceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            689999999999999999999985  6 8888888765433332211  11 78999999999998887775       6


Q ss_pred             ccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      +|++||+||....     +...+++...+++|+.++.++++++    ++.+ .++|++||..+..+.+..          
T Consensus        79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~----------  147 (254)
T 3kzv_A           79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSW----------  147 (254)
T ss_dssp             CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCS----------
T ss_pred             ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCc----------
Confidence            8999999997532     1223345778999999999999988    4445 799999998654433221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHc-CCeEEEEcCCcccCCCCCCCCC------hhHHHHHHHHcCCCCccCcC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLN------ASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~  224 (331)
                                ..|+.+|...+.+.+.++.+. ++++..++||.+.++.......      ........+....      .
T Consensus       148 ----------~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  211 (254)
T 3kzv_A          148 ----------GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK------E  211 (254)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH------T
T ss_pred             ----------chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH------h
Confidence                      379999999999999988774 8999999999999986533211      0112222222211      2


Q ss_pred             CCCceeHHHHHHHHHHhhcCCC---CCceE-EEecc
Q 020110          225 WLGAVPVKDVAKAQVLLFESPA---ASGRY-LCTNG  256 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~~---~~g~~-~~~~~  256 (331)
                      ...+.+++|+|+++++++....   ..|.+ .+.++
T Consensus       212 ~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~  247 (254)
T 3kzv_A          212 NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDP  247 (254)
T ss_dssp             TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCG
T ss_pred             cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCc
Confidence            3457889999999999887653   46644 44443

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.90  E-value=1.5e-22  Score=174.60  Aligned_cols=224  Identities=19%  Similarity=0.107  Sum_probs=156.2

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc---------cchhh----cCCCCCCCcEEEEEccCCCch
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---------SSHLF----ALPGAGDANLRVFEADVLDSG   72 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~---------~~~~~----~~~~~~~~~~~~~~~Dl~~~~   72 (331)
                      ..++|++|||||+|+||++++++|+++|+ +|++++|+...         ...+.    ++..... ++.++.+|++|++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~  102 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRDFD  102 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCCHH
Confidence            34568999999999999999999999999 99999887321         11111    1111122 7899999999999


Q ss_pred             HHHHHhc-------CccEEEEcccCCCCCC-----CCCchhhhhHHHHHHHHHHHHHHHhC-----CCCEEEEeCcccee
Q 020110           73 AVSRAVE-------GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAI  135 (331)
Q Consensus        73 ~~~~~~~-------~~d~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~  135 (331)
                      ++.++++       .+|++||+||......     ..+++...+++|+.++.++++++...     +..++|++||..+.
T Consensus       103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~  182 (299)
T 3t7c_A          103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL  182 (299)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence            8887775       6899999999765422     23445788999999999999986432     35689999998665


Q ss_pred             ccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCC---------
Q 020110          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---------  203 (331)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~---------  203 (331)
                      .+.+..                    ..|+.+|...+.+.+.++.+.   |+++.+++||.+.++......         
T Consensus       183 ~~~~~~--------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  242 (299)
T 3t7c_A          183 RGAENI--------------------GNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDL  242 (299)
T ss_dssp             SCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTS
T ss_pred             cCCCCc--------------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhh
Confidence            433321                    379999999999999888664   899999999999998643210         


Q ss_pred             --ChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          204 --NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       204 --~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                        ...............     ....+..++|+|+++++++....  ..| .+++.++
T Consensus       243 ~~~~~~~~~~~~~~~~~-----~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  295 (299)
T 3t7c_A          243 ENPTVEDFQVASRQMHV-----LPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG  295 (299)
T ss_dssp             SSCCHHHHHHHHHHHSS-----SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccchhhHHHHHhhhhcc-----cCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCC
Confidence              000000000000000     11457899999999999986542  456 4555543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.90  E-value=1.4e-22  Score=176.09  Aligned_cols=228  Identities=17%  Similarity=0.124  Sum_probs=156.1

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc---------cchhhcC---CCCCCCcEEEEEccCCCc
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---------SSHLFAL---PGAGDANLRVFEADVLDS   71 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~---------~~~~~~~---~~~~~~~~~~~~~Dl~~~   71 (331)
                      |...+.|++|||||+|+||+++++.|+++|+ +|++++|+...         ...+.+.   ....+.++.++.+|++|+
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            3334567999999999999999999999999 99999876321         1111110   000112789999999999


Q ss_pred             hHHHHHhc-------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CC-CCEEEEeCcccee
Q 020110           72 GAVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAI  135 (331)
Q Consensus        72 ~~~~~~~~-------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~  135 (331)
                      +++.++++       ++|++||+||.....    ...+++...+++|+.++.++++++..    .+ ..+||++||..++
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            99888775       689999999976532    22344577899999999999988743    22 4579999998665


Q ss_pred             ccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCC---------C
Q 020110          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---------L  203 (331)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~---------~  203 (331)
                      .+.++.                    ..|+.+|...+.+.+.++.+   .|+++++++||.+.++.....         .
T Consensus       200 ~~~~~~--------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  259 (317)
T 3oec_A          200 RGAPGQ--------------------SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHL  259 (317)
T ss_dssp             SCCTTB--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTC
T ss_pred             CCCCCC--------------------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhc
Confidence            443321                    37999999999999988866   489999999999998742110         0


Q ss_pred             -ChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          204 -NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       204 -~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                       .............    .......|++++|+|+++++++...  ...| .+++.++
T Consensus       260 ~~~~~~~~~~~~~~----~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG  312 (317)
T 3oec_A          260 ENPTREDAAELFSQ----LTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG  312 (317)
T ss_dssp             SSCCHHHHHHHHTT----TCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cccchhHHHHHHhh----hccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence             0000000111000    0112267899999999999888643  3456 4566553

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.90  E-value=7e-23  Score=170.73  Aligned_cols=202  Identities=17%  Similarity=0.098  Sum_probs=149.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +||++|||||+|+||++++++|+++|+ +|++.+|+......... +....+.++.++.+|++|++++.++++       
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            368999999999999999999999999 99999997654332221 100011278999999999999988886       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      ++|++||+||......    ..+++...+++|+.++.++++++...   +..++|++||.....+.+..           
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-----------  148 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYG-----------  148 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTC-----------
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCc-----------
Confidence            5899999999765432    33445778999999999999987542   33578888886554432221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH-cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                               ..|+.+|...+.+.+.+..+ .++++++++||.+.++.......                 ......++.+
T Consensus       149 ---------~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~-----------------~~~~~~~~~p  202 (235)
T 3l77_A          149 ---------GGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG-----------------KPKEKGYLKP  202 (235)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC-----------------CCGGGTCBCH
T ss_pred             ---------chHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC-----------------cccccCCCCH
Confidence                     37999999999999887544 48999999999998775332100                 0012257899


Q ss_pred             HHHHHHHHHhhcCCCC
Q 020110          232 KDVAKAQVLLFESPAA  247 (331)
Q Consensus       232 ~D~a~a~~~~l~~~~~  247 (331)
                      +|+|++++.++..+..
T Consensus       203 ~dva~~v~~l~~~~~~  218 (235)
T 3l77_A          203 DEIAEAVRCLLKLPKD  218 (235)
T ss_dssp             HHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHcCCCC
Confidence            9999999999987653

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.90  E-value=1.5e-22  Score=169.94  Aligned_cols=208  Identities=22%  Similarity=0.200  Sum_probs=148.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+......+.+ +..... ++.++.+|++|++++.++++       
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999 99999997644332221 111112 78899999999998887765       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|++||+||......    ..+++...+++|+.++.++++++..    .+ +++|++||..+..+.+..          
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~----------  152 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNA----------  152 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTC----------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCC----------
Confidence            6899999999754321    2233467899999999999988743    35 799999997554332221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++.+   +|+++++++||.+.++........  . ........+     ....+
T Consensus       153 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~-~~~~~~~~~-----~~~~~  214 (247)
T 2jah_A          153 ----------AVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHT--A-TKEMYEQRI-----SQIRK  214 (247)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCH--H-HHHHHHHHT-----TTSCC
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccch--h-hHHHHHhcc-----cccCC
Confidence                      37999999999988887755   489999999999998753221111  1 111111101     11225


Q ss_pred             eeHHHHHHHHHHhhcCCC
Q 020110          229 VPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~~  246 (331)
                      +..+|+|++++.++..+.
T Consensus       215 ~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          215 LQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             BCHHHHHHHHHHHHHSCT
T ss_pred             CCHHHHHHHHHHHhCCCc
Confidence            899999999999987653

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.90  E-value=1.4e-22  Score=173.68  Aligned_cols=221  Identities=17%  Similarity=0.106  Sum_probs=155.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chh-hcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHL-FALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+.... ... ..+..... ++.++.+|+++.+++.++++      
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIF  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 999999876431 111 11111112 78899999999988877664      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                       ++|+|||+||.....    ...+++...+++|+.++.++++++...  +.+++|++||..+..+.+.            
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  173 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP------------  173 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS------------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC------------
Confidence             589999999976432    123445778999999999999998765  5679999999755332211            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCC-------CC-ChhHHHHHHHHc--CCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP-------YL-NASCAVLQQLLQ--GSKD  219 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~-------~~-~~~~~~~~~~~~--~~~~  219 (331)
                             ....|+.+|...+.+.+.++.+   +|+++++++||.+.++....       .. .........+..  ..  
T Consensus       174 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  244 (283)
T 1g0o_A          174 -------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS--  244 (283)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC--
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCC--
Confidence                   0137999999999999888755   48999999999998874210       00 000111222222  11  


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                          ....+.+++|+|+++++++...  ...|. +.+.+
T Consensus       245 ----p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdg  279 (283)
T 1g0o_A          245 ----PLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG  279 (283)
T ss_dssp             ----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ----CCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence                1234789999999999998754  24564 45544

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.90  E-value=2.8e-22  Score=168.62  Aligned_cols=208  Identities=17%  Similarity=0.181  Sum_probs=149.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|+||||||+|+||++++++|+++|+ +|+++.|+.....           .+.++.+|++|+++++++++       .
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~   87 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEETHGP   87 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999 9999998754321           46788999999998887775       3


Q ss_pred             ccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|++||+||....    +...+++...+++|+.++.++++++..    .+.+++|++||..+..+.+.            
T Consensus        88 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------  155 (253)
T 2nm0_A           88 VEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAG------------  155 (253)
T ss_dssp             CSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHH------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC------------
Confidence            6999999997543    223456788999999999999887643    35679999999755332111            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                         .     ..|+.+|...+.+.+.++.+   .++++++++|+.+.++.....   .......+....      ....++
T Consensus       156 ---~-----~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~------p~~~~~  218 (253)
T 2nm0_A          156 ---Q-----ANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVL---TDEQRANIVSQV------PLGRYA  218 (253)
T ss_dssp             ---H-----HHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------CHHHHHTTC------TTCSCB
T ss_pred             ---c-----HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc---CHHHHHHHHhcC------CCCCCc
Confidence               1     37999999999999888765   479999999999987753211   000111111111      123578


Q ss_pred             eHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          230 PVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      +++|+|++++.++...  ...|. +.+.++
T Consensus       219 ~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG  248 (253)
T 2nm0_A          219 RPEEIAATVRFLASDDASYITGAVIPVDGG  248 (253)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCccccCCcCcEEEECCc
Confidence            9999999999988754  23564 455443

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.90  E-value=2.6e-22  Score=170.73  Aligned_cols=221  Identities=15%  Similarity=0.132  Sum_probs=154.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|+++.++... ...+.+ +..... ++.++.+|++|++++.++++     
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3457999999999999999999999999 99987765432 121111 111112 78999999999998887775     


Q ss_pred             --CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhCCC--CEEEEeCccce-eccCCCCCCccccCCC
Q 020110           80 --GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTSSISA-IVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~~-~~~~~~~~~~~~~E~~  150 (331)
                        ++|++||+||......    ..+++...+++|+.++.++++++...-.  .++|++||... ..+.+.          
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  163 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPK----------  163 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTT----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCC----------
Confidence              5799999999765422    3344578899999999999998876533  48999999642 111111          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCC---------CChhHHHHHHHHcCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---------LNASCAVLQQLLQGSK  218 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~---------~~~~~~~~~~~~~~~~  218 (331)
                                ...|+.+|...+.+.+.++.+   +|+++.+++||.+.++.....         ............... 
T Consensus       164 ----------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  232 (270)
T 3is3_A          164 ----------HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS-  232 (270)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS-
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC-
Confidence                      137999999999999988866   489999999999998853210         000111111111111 


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                           ....+.+++|+|+++++++...  ...|. +++.+
T Consensus       233 -----p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  267 (270)
T 3is3_A          233 -----PLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDG  267 (270)
T ss_dssp             -----TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             -----CCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCC
Confidence                 2345788999999999988643  34564 55554

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.90  E-value=5.4e-23  Score=173.91  Aligned_cols=209  Identities=17%  Similarity=0.133  Sum_probs=146.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +|++|||||+|+||++++++|+++|+ +|++++|+..............+.++.++.+|++|++++.++++       ++
T Consensus         4 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            4 DKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999 99999998654333222111111278899999999998887765       68


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |++||+||......    ..+++...+++|+.++.++.+++.    +.+..++|++||..++.+.+..            
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~------------  150 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTA------------  150 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCC------------
Confidence            99999999764321    234457789999999998888764    3356789999998665443322            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHc-CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHH
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  232 (331)
                              ..|+.+|...+.+.+.++.+. ++++++++||.+.++........  . ...       ........++..+
T Consensus       151 --------~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~--~-~~~-------~~~~~~~~~~~pe  212 (264)
T 3tfo_A          151 --------AVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHE--E-TMA-------AMDTYRAIALQPA  212 (264)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---------------------------------CCCHH
T ss_pred             --------hhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccch--h-HHH-------HHHhhhccCCCHH
Confidence                    379999999999999988765 89999999999988753221000  0 000       0000112257899


Q ss_pred             HHHHHHHHhhcCCCCC
Q 020110          233 DVAKAQVLLFESPAAS  248 (331)
Q Consensus       233 D~a~a~~~~l~~~~~~  248 (331)
                      |+|++++.++..+...
T Consensus       213 dvA~~v~~l~s~~~~~  228 (264)
T 3tfo_A          213 DIARAVRQVIEAPQSV  228 (264)
T ss_dssp             HHHHHHHHHHHSCTTE
T ss_pred             HHHHHHHHHhcCCccC
Confidence            9999999999877543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.90  E-value=2.9e-23  Score=174.63  Aligned_cols=199  Identities=15%  Similarity=0.159  Sum_probs=149.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +|+||||||+|+||++++++|+++|+ +|++++|+....            ....+.+|++|.+++.++++       .+
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~i   88 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPN------------ADHSFTIKDSGEEEIKSVIEKINSKSIKV   88 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTT------------SSEEEECSCSSHHHHHHHHHHHHTTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccc------------cccceEEEeCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999 999999986542            22357799999998887775       36


Q ss_pred             cEEEEcccCCCCC-----CCCCchhhhhHHHHHHHHHHHHHHHhCC--CCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           82 KGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        82 d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      |+|||+||.....     ...+++...+++|+.++.++++++....  -.++|++||..++.+.+..             
T Consensus        89 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  155 (251)
T 3orf_A           89 DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGM-------------  155 (251)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB-------------
T ss_pred             CEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCC-------------
Confidence            9999999975432     1223347789999999999999987642  2489999998665433221             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH-----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                             ..|+.+|...+.+.+.++.+     .++++++++||.+.++..           .......      ....++
T Consensus       156 -------~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~-----------~~~~~~~------~~~~~~  211 (251)
T 3orf_A          156 -------IAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN-----------RKYMSDA------NFDDWT  211 (251)
T ss_dssp             -------HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-----------HHHCTTS------CGGGSB
T ss_pred             -------chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch-----------hhhcccc------cccccC
Confidence                   37999999999999998866     579999999999877531           1111111      235678


Q ss_pred             eHHHHHHHHHHhhcC---CCCCc-eEE-Eeccc
Q 020110          230 PVKDVAKAQVLLFES---PAASG-RYL-CTNGI  257 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~---~~~~g-~~~-~~~~~  257 (331)
                      +++|+|++++.++..   ....| .+. .++..
T Consensus       212 ~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          212 PLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             CHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             CHHHHHHHHHHHhcCccccCCcceEEEEecCCc
Confidence            999999999999987   44456 443 34433

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.90  E-value=1.3e-22  Score=172.15  Aligned_cols=220  Identities=19%  Similarity=0.189  Sum_probs=150.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC-ccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++..++.. ....+.+.....+.++.++.+|++|++++.++++       
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999 9988755433 2222221111111278899999999998888775       


Q ss_pred             CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      ++|++||+||......    ..+.+...+++|+.++.++++++...  ...++|++||..+..+.+..            
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  172 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSY------------  172 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTC------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCc------------
Confidence            6899999999765322    22334677889999999999987654  22589999997654433321            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                              ..|+.+|...+.+.+.++.+.   |+++.++.||.+.++......  .......+....      ....+..
T Consensus       173 --------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~------p~~r~~~  236 (267)
T 3u5t_A          173 --------GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK--SDEVRDRFAKLA------PLERLGT  236 (267)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------CHHHHHTSS------TTCSCBC
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC--CHHHHHHHHhcC------CCCCCcC
Confidence                    379999999999999998774   799999999999887532210  011111222221      2345788


Q ss_pred             HHHHHHHHHHhhcCCC--CCce-EEEecc
Q 020110          231 VKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~--~~g~-~~~~~~  256 (331)
                      ++|+|+++++++....  ..|. +.+.|+
T Consensus       237 pedvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          237 PQDIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             HHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             HHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            9999999999887543  3564 455543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.90  E-value=9.9e-23  Score=173.99  Aligned_cols=228  Identities=18%  Similarity=0.156  Sum_probs=156.6

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC----------ccchhhcC---CCCCCCcEEEEEccCCCch
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS----------DSSHLFAL---PGAGDANLRVFEADVLDSG   72 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~----------~~~~~~~~---~~~~~~~~~~~~~Dl~~~~   72 (331)
                      ..++|++|||||+|+||++++++|+++|+ +|++++|+..          ....+.+.   ....+.++.++.+|++|++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD   86 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            44568999999999999999999999999 9999988422          11111110   0001127899999999999


Q ss_pred             HHHHHhc-------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----C-CCEEEEeCccceec
Q 020110           73 AVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIV  136 (331)
Q Consensus        73 ~~~~~~~-------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~  136 (331)
                      ++.++++       .+|++||+||.....    ...+++...+++|+.++.++++++...    + ..++|++||..+..
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  166 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK  166 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence            8887775       589999999976542    223445778999999999999876432    2 45899999986654


Q ss_pred             cCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHH
Q 020110          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQL  213 (331)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  213 (331)
                      +.+..                    ..|+.+|...+.+.+.++.+   +|+++.+++||.+.++.....  .........
T Consensus       167 ~~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~  224 (277)
T 3tsc_A          167 MQPFM--------------------IHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD--MVTAVGQAM  224 (277)
T ss_dssp             CCSSC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH--HHHHHHHHH
T ss_pred             CCCCc--------------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch--hhhhhhhcc
Confidence            43321                    37999999999999988866   489999999999988763210  011111111


Q ss_pred             HcCCCCc--c-CcCCCCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          214 LQGSKDT--Q-EYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       214 ~~~~~~~--~-~~~~~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      .......  . ......+.+++|+|+++++++....  ..| .+.+.++
T Consensus       225 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  273 (277)
T 3tsc_A          225 ETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG  273 (277)
T ss_dssp             HTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence            1111111  1 1112248899999999999986543  456 4556554

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.90  E-value=8e-23  Score=171.56  Aligned_cols=203  Identities=17%  Similarity=0.155  Sum_probs=142.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Ccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   82 (331)
                      |++|||||+|+||++++++|+++|+ +|++++|+......+.+...  . ++.++.+|++|++++.++++       ++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELG--D-NLYIAQLDVRNRAAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC--T-TEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc--C-ceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            4799999999999999999999999 99999997644333221111  1 68899999999999988875       579


Q ss_pred             EEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           83 GVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        83 ~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      ++||+||....     +...+++...+++|+.++.++++++.    +.+.+++|++||..+..+.+..            
T Consensus        77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------------  144 (248)
T 3asu_A           77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGG------------  144 (248)
T ss_dssp             EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC------------
T ss_pred             EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCC------------
Confidence            99999997521     12234457789999999999988875    3456799999997554332211            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCccc-CCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCL-GPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                              ..|+.+|...+.+.+.++.+   .|+++++++||.+. .+..............+.       .  ....++
T Consensus       145 --------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~-------~--~~~~~~  207 (248)
T 3asu_A          145 --------NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT-------Y--QNTVAL  207 (248)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------------------CCB
T ss_pred             --------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHH-------H--hccCCC
Confidence                    37999999999999988866   38999999999999 454211000000000000       0  112347


Q ss_pred             eHHHHHHHHHHhhcCC
Q 020110          230 PVKDVAKAQVLLFESP  245 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~  245 (331)
                      .++|+|++++.++...
T Consensus       208 ~p~dvA~~v~~l~s~~  223 (248)
T 3asu_A          208 TPEDVSEAVWWVSTLP  223 (248)
T ss_dssp             CHHHHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHhcCC
Confidence            9999999999998764

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.89  E-value=6.2e-23  Score=172.89  Aligned_cols=220  Identities=18%  Similarity=0.173  Sum_probs=151.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +.|++|||||+|+||++++++|+++|+ +|++++|+........+..  .. ++.++.+|++|++++.++++       .
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAEL--GE-RSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH--CT-TEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc--CC-ceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 9999998764433222111  11 78899999999998887765       4


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|+|||+||.....    ...+++...+++|+.++.++.+++    ++.+ +++|++||..++.+.+..           
T Consensus        81 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~-----------  148 (253)
T 1hxh_A           81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQY-----------  148 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTB-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCC-----------
Confidence            69999999975432    122345778999988877766654    4446 799999997554332211           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---c--CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---H--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                               ..|+.+|...+.+.+.++.+   +  +++++++||+.++++........  ............  ......
T Consensus       149 ---------~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~--~~p~~~  215 (253)
T 1hxh_A          149 ---------AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK--GVSKEMVLHDPK--LNRAGR  215 (253)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT--TCCHHHHBCBTT--TBTTCC
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccch--hhhHHHHhhhhc--cCccCC
Confidence                     37999999999999888755   3  89999999999998752110000  000110111000  011245


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      +.+++|+|++++.++....  ..| .+.+.++
T Consensus       216 ~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          216 AYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             EECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            7899999999999887542  456 4555554

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.89  E-value=8.2e-23  Score=170.10  Aligned_cols=197  Identities=16%  Similarity=0.066  Sum_probs=145.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      ||++|||||+|+||++++++|+++|+ +|++++|+........+...  . ++.++.+|++|++++.++++       .+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLG--N-AVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG--G-GEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhc--C-CceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999 99999997654333322111  1 68899999999998887775       57


Q ss_pred             cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        82 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      |++||+||.....    ...+++...+++|+.++.++++++...   .-.++|++||..+..+.+..             
T Consensus        79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------------  145 (235)
T 3l6e_A           79 ELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANE-------------  145 (235)
T ss_dssp             SEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSH-------------
T ss_pred             cEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCC-------------
Confidence            9999999975432    233445778999999999999887432   11389999997665443321             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                             ..|+.+|...+.+.+.++.+   .|+++.+++||.+.++.......            .      ....++.+
T Consensus       146 -------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------------~------~~~~~~~p  200 (235)
T 3l6e_A          146 -------SLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH------------V------DPSGFMTP  200 (235)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------------------CBCH
T ss_pred             -------cHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC------------C------CCcCCCCH
Confidence                   27999999999999998865   47999999999997765321100            0      12257899


Q ss_pred             HHHHHHHHHhhcCCCC
Q 020110          232 KDVAKAQVLLFESPAA  247 (331)
Q Consensus       232 ~D~a~a~~~~l~~~~~  247 (331)
                      +|+|++++.++..+..
T Consensus       201 edvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          201 EDAAAYMLDALEARSS  216 (235)
T ss_dssp             HHHHHHHHHHTCCCSS
T ss_pred             HHHHHHHHHHHhCCCC
Confidence            9999999999976543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.89  E-value=8.5e-23  Score=173.24  Aligned_cols=225  Identities=17%  Similarity=0.077  Sum_probs=156.1

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCC-CCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG-AGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+........+ +.. ..+.++.++.+|++|++++.++++     
T Consensus         6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3467999999999999999999999999 99999997654332221 100 111148999999999998887764     


Q ss_pred             --CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 --~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                        ++|++||+||.....    ...+++...+++|+.++.++++++..    .+..++|++||..+..+.+..        
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  156 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHM--------  156 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTB--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCc--------
Confidence              579999999975432    22344577899999999999998743    345689999997664433221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCC------C-hhHHHHHHHHcCCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL------N-ASCAVLQQLLQGSKD  219 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~------~-~~~~~~~~~~~~~~~  219 (331)
                                  ..|+.+|...+.+.+.++.+.   |+++.+++||.+.++......      . ....+..........
T Consensus       157 ------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
T 3lf2_A          157 ------------VATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQI  224 (265)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTC
T ss_pred             ------------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCC
Confidence                        379999999999998887664   899999999999886421100      0 001111111111111


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                          ....+..++|+|+++++++...  ...|. +.+.++
T Consensus       225 ----p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  260 (265)
T 3lf2_A          225 ----PLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGG  260 (265)
T ss_dssp             ----TTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSS
T ss_pred             ----CcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCC
Confidence                2345788999999999988743  34664 455543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.89  E-value=5.6e-23  Score=174.06  Aligned_cols=219  Identities=21%  Similarity=0.189  Sum_probs=151.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      +.|++|||||+|+||++++++|+++|+ +|++++|+......... +..... ++.++.+|++|++++.++++       
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            457999999999999999999999999 99999987644332221 111112 78899999999988877765       


Q ss_pred             CccEEEEcccCC-CC----CCCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPC-TL----EDPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~-~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      ++|+|||+||.. ..    +...+++...+++|+.++.++++++...    +.+++|++||..+..+.+..         
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  154 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM---------  154 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB---------
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCC---------
Confidence            689999999975 21    1223345778999999999999887543    55799999997665433221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCC------------CChhHH-HHHHHH
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY------------LNASCA-VLQQLL  214 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~------------~~~~~~-~~~~~~  214 (331)
                                 ..|+.+|...+.+.+.++.+   +|+++++++||.+..+.....            ...... ....+.
T Consensus       155 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (262)
T 1zem_A          155 -----------AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMI  223 (262)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHH
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHH
Confidence                       37999999999888887754   489999999999877642110            000001 111111


Q ss_pred             cCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEe
Q 020110          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCT  254 (331)
Q Consensus       215 ~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~  254 (331)
                      ...+      ...+...+|+|+++++++...  ...|. +.+.
T Consensus       224 ~~~p------~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vd  260 (262)
T 1zem_A          224 GSVP------MRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIA  260 (262)
T ss_dssp             HTST------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hcCC------CCCCcCHHHHHHHHHHHcCchhcCcCCcEEecC
Confidence            1111      234678899999999988653  23563 3443

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.89  E-value=3.8e-22  Score=174.16  Aligned_cols=217  Identities=15%  Similarity=0.112  Sum_probs=154.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEe-cCCCccchhhcCCC-CCCCcEEEEEccCCCch-------------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLFALPG-AGDANLRVFEADVLDSG-------------   72 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~-------------   72 (331)
                      +.|++|||||+|+||++++++|+++|+ +|++++ |+......+.+... ..+.++.++.+|++|++             
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            457899999999999999999999999 999998 76543322211100 00117899999999998             


Q ss_pred             ----HHHHHhc-------CccEEEEcccCCCCCCC------------------CCchhhhhHHHHHHHHHHHHHHHh---
Q 020110           73 ----AVSRAVE-------GCKGVFHVASPCTLEDP------------------VDPEKELILPAVQGTLNVLEAAKR---  120 (331)
Q Consensus        73 ----~~~~~~~-------~~d~vih~a~~~~~~~~------------------~~~~~~~~~~n~~~~~~l~~~~~~---  120 (331)
                          ++.++++       .+|+|||+||.......                  .+++...+++|+.++.++++++..   
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                8887775       68999999997543211                  223456799999999999887753   


Q ss_pred             -CC------CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEc
Q 020110          121 -FG------VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIH  190 (331)
Q Consensus       121 -~~------~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR  190 (331)
                       .+      ..+||++||..+..+.++.                    ..|+.+|...+.+.+.++.+.   |+++++++
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~~~~~~--------------------~~Y~asKaal~~l~~~la~el~~~gIrvn~v~  263 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQPLLGY--------------------TIYTMAKGALEGLTRSAALELAPLQIRVNGVG  263 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             hcCCcCCCCCcEEEEECchhhccCCCCc--------------------HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEe
Confidence             34      5789999997554332221                    379999999999999887664   89999999


Q ss_pred             CCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC-CceeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL-GAVPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       191 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      ||.+.++. .. .   ......+....+      .. .+..++|+|+++++++...  ...|. +.+.++
T Consensus       264 PG~v~T~~-~~-~---~~~~~~~~~~~p------~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  322 (328)
T 2qhx_A          264 PGLSVLVD-DM-P---PAVWEGHRSKVP------LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  322 (328)
T ss_dssp             ESSBSCCC-CS-C---HHHHHHHHTTCT------TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCcccCCc-cc-c---HHHHHHHHhhCC------CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            99999987 22 1   222333332221      12 4678999999999998643  34564 455543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=4e-23  Score=172.32  Aligned_cols=188  Identities=17%  Similarity=0.192  Sum_probs=141.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---------   79 (331)
                      +|+||||||+|+||++++++|+++|+ +|++++|+......          ...++.+|++|++++.++++         
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   71 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD----------SNILVDGNKNWTEQEQSILEQTASSLQGS   71 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS----------EEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCcccccc----------ccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999 99999998654211          45678899999988877764         


Q ss_pred             CccEEEEcccCCCCCC-----CCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      ++|+|||+||......     ..+++...+++|+.++.++++++...  ...++|++||..++.+.+..           
T Consensus        72 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  140 (236)
T 1ooe_A           72 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSM-----------  140 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB-----------
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCc-----------
Confidence            6899999999754321     12334778999999999999988654  22589999997654432221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc-----CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-----GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                               ..|+.+|...+.+.+.++.+.     ++++++++|+.+.++...           .....      .....
T Consensus       141 ---------~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~------~~~~~  194 (236)
T 1ooe_A          141 ---------IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR-----------KWMPN------ADHSS  194 (236)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH-----------HHSTT------CCGGG
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh-----------hcCCC------ccccc
Confidence                     379999999999999988654     499999999999876311           11000      01234


Q ss_pred             ceeHHHHHHHHHHhhcC
Q 020110          228 AVPVKDVAKAQVLLFES  244 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~  244 (331)
                      +++.+|+|++++.++.+
T Consensus       195 ~~~~~dvA~~i~~~l~s  211 (236)
T 1ooe_A          195 WTPLSFISEHLLKWTTE  211 (236)
T ss_dssp             CBCHHHHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHHHcC
Confidence            67889999999877733

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.89  E-value=2.7e-22  Score=168.50  Aligned_cols=209  Identities=14%  Similarity=0.076  Sum_probs=146.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh---cCccE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV---EGCKG   83 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~d~   83 (331)
                      .++|+||||||+|+||++++++|+++|+ +|++++|+...   ..++    + .+.++ +|+  .+++.+++   .++|+
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~----~-~~~~~-~D~--~~~~~~~~~~~~~iD~   84 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRS----G-HRYVV-CDL--RKDLDLLFEKVKEVDI   84 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHT----C-SEEEE-CCT--TTCHHHHHHHSCCCSE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhh----C-CeEEE-eeH--HHHHHHHHHHhcCCCE
Confidence            3568999999999999999999999999 99999987622   2222    1 56677 999  33444444   47999


Q ss_pred             EEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHH----HHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           84 VFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        84 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      |||+||.....    ...+++...+++|+.++.++.++    +++.+.+++|++||..++.+.+..              
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  150 (249)
T 1o5i_A           85 LVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENL--------------  150 (249)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB--------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCC--------------
Confidence            99999965432    12234577889999988776554    445567899999998554332211              


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHH-HHHcCCCCccCcCCCCceeH
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQ-QLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v  231 (331)
                            ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.......   .... .+....      ....+.++
T Consensus       151 ------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~------p~~~~~~~  215 (249)
T 1o5i_A          151 ------YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS---EEKKKQVESQI------PMRRMAKP  215 (249)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC---HHHHHHHHTTS------TTSSCBCH
T ss_pred             ------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch---hhHHHHHHhcC------CCCCCcCH
Confidence                  37999999999999888765   58999999999999986321000   1111 222221      12458899


Q ss_pred             HHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          232 KDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       232 ~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      +|+|++++.++...  ...| .+++.++
T Consensus       216 ~dvA~~i~~l~s~~~~~~tG~~~~vdgG  243 (249)
T 1o5i_A          216 EEIASVVAFLCSEKASYLTGQTIVVDGG  243 (249)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            99999999888653  2346 4566554

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.89  E-value=3.6e-23  Score=175.09  Aligned_cols=225  Identities=10%  Similarity=0.079  Sum_probs=153.0

Q ss_pred             cccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc----CCCCCCCcEEEEEccCCCchHHHHHh
Q 020110            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA----LPGAGDANLRVFEADVLDSGAVSRAV   78 (331)
Q Consensus         3 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~   78 (331)
                      .|.+.+.|++|||||+|+||++++++|+++|+ +|+++.|.......+.+    +..... ++.++.+|++|++++.+++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGA-KVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTC-EEEEEECCCCSHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHH
Confidence            34455668999999999999999999999999 99998775433222221    111122 7899999999999988877


Q ss_pred             c-------CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCcc
Q 020110           79 E-------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        79 ~-------~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                      +       ++|++||+||......    ..+++...+++|+.++.++++++...  +..++|++||..+..+.+..    
T Consensus        83 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~----  158 (262)
T 3ksu_A           83 DFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFY----  158 (262)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCC----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCC----
Confidence            5       6899999999765422    23345678899999999999998765  34689999997665443321    


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccC
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (331)
                                      ..|+.+|...+.+.+.++.+.   |+++.++.||.+.++........  ........      .
T Consensus       159 ----------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~------~  214 (262)
T 3ksu_A          159 ----------------STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETK--ESTAFHKS------Q  214 (262)
T ss_dssp             ----------------CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------------
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCch--HHHHHHHh------c
Confidence                            379999999999999988775   89999999999977642111000  00000000      0


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCC-CCCce-EEEeccc
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESP-AASGR-YLCTNGI  257 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~-~~~g~-~~~~~~~  257 (331)
                      .....+..++|+|+++++++... ...|. +.+.|+.
T Consensus       215 ~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~  251 (262)
T 3ksu_A          215 AMGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGY  251 (262)
T ss_dssp             -CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTC
T ss_pred             CcccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCc
Confidence            12345788999999999988752 24564 5666554

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.89  E-value=2.4e-22  Score=168.05  Aligned_cols=199  Identities=13%  Similarity=0.133  Sum_probs=146.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------   79 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+......          ...++.+|++|++++.++++        
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~----------~~~~~~~D~~~~~~v~~~~~~~~~~~~~   74 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEAS----------ASVIVKMTDSFTEQADQVTAEVGKLLGD   74 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTSS----------EEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhccC----------CcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            367999999999999999999999999 99999997654211          45678899999988887765        


Q ss_pred             -CccEEEEcccCCCCCC-----CCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 -GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                       ++|++||+||......     ..+++...+++|+.++.++++++...  ...++|++||..+..+.+..          
T Consensus        75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  144 (241)
T 1dhr_A           75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM----------  144 (241)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB----------
T ss_pred             CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCc----------
Confidence             6899999999754321     12334677899999999999988654  12589999997654432221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH-----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                ..|+.+|...+.+.+.++.+     .|+++++++||.+-++..           ......      ....
T Consensus       145 ----------~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~-----------~~~~~~------~~~~  197 (241)
T 1dhr_A          145 ----------IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------RKSMPE------ADFS  197 (241)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------HHHSTT------SCGG
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc-----------cccCcc------hhhc
Confidence                      37999999999999988765     359999999998866521           011011      1123


Q ss_pred             CceeHHHHHHHHHHhhcCCC--CCce-EEEe
Q 020110          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCT  254 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~~--~~g~-~~~~  254 (331)
                      .+++.+|+|++++.++....  ..|. +.+.
T Consensus       198 ~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~  228 (241)
T 1dhr_A          198 SWTPLEFLVETFHDWITGNKRPNSGSLIQVV  228 (241)
T ss_dssp             GSEEHHHHHHHHHHHHTTTTCCCTTCEEEEE
T ss_pred             cCCCHHHHHHHHHHHhcCCCcCccceEEEEe
Confidence            46889999999999886543  3453 4443

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.89  E-value=7.5e-22  Score=164.43  Aligned_cols=221  Identities=18%  Similarity=0.080  Sum_probs=156.1

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.+.|.+|||||++.||+.+++.|.++|. +|++.+|+........+.....+.++.++.+|++|+++++++++      
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999 99999997655433322211112279999999999999887764      


Q ss_pred             -CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 -~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                       ++|++||+||....     +...++++..+++|+.++..+.+++..    .+-.++|++||..+..+.+..        
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~--------  154 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAG--------  154 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSC--------
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCC--------
Confidence             57999999996432     223445688999999999988887643    355789999998665544332        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                  ..|+.+|.....+.+.++.+   +||++..+-||.+-.+....................+.     ..
T Consensus       155 ------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-----~~  217 (254)
T 4fn4_A          155 ------------APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSL-----SS  217 (254)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTT-----CC
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCC-----CC
Confidence                        26999999988888887755   48999999999998875432211111111121111110     12


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCceEE
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGRYL  252 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~~~  252 (331)
                      -+...+|+|.++++++...  ...|..+
T Consensus       218 R~g~pediA~~v~fLaSd~a~~iTG~~i  245 (254)
T 4fn4_A          218 RLAEPEDIANVIVFLASDEASFVNGDAV  245 (254)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCEE
Confidence            3567899999999988643  3466543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.89  E-value=2.7e-22  Score=170.50  Aligned_cols=206  Identities=19%  Similarity=0.231  Sum_probs=142.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC-------cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------CK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~d   82 (331)
                      |++|||||+|+||++++++|+++|+ +|++++|+......+.+...... ++.++.+|++|++++.+++++       +|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKT-RVLPLTLDVRDRAAMSAAVDNLPEEFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHTCCGGGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999999 99999997644333221111112 788999999999999988864       59


Q ss_pred             EEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCC-EEEEeCccceeccCCCCCCccccCCCCC
Q 020110           83 GVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        83 ~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~-~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      ++||+||....     +...+++...+++|+.++.++.+++.    +.+.+ ++|++||..+..+.+..           
T Consensus       100 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~-----------  168 (272)
T 2nwq_A          100 GLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGS-----------  168 (272)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTC-----------
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCC-----------
Confidence            99999997542     12233457789999999888777663    44566 99999997554332221           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   .|+++++++||.+.++..............+..         ....++
T Consensus       169 ---------~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~---------~~~~~~  230 (272)
T 2nwq_A          169 ---------HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTY---------AGAHPI  230 (272)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------------CCCCB
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhh---------ccCCCC
Confidence                     37999999999999988755   479999999999988753211000000000000         012257


Q ss_pred             eHHHHHHHHHHhhcCCC
Q 020110          230 PVKDVAKAQVLLFESPA  246 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~~  246 (331)
                      ..+|+|++++.++....
T Consensus       231 ~pedvA~~v~~l~s~~~  247 (272)
T 2nwq_A          231 QPEDIAETIFWIMNQPA  247 (272)
T ss_dssp             CHHHHHHHHHHHHTSCT
T ss_pred             CHHHHHHHHHHHhCCCc
Confidence            89999999999987643

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.89  E-value=1.5e-22  Score=173.43  Aligned_cols=221  Identities=14%  Similarity=0.083  Sum_probs=156.0

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCC--CEEEEEecCCCccchhhcCCC--CCCCcEEEEEccCCCchHHHHHhc--
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPG--AGDANLRVFEADVLDSGAVSRAVE--   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~--   79 (331)
                      ..++|++|||||+|+||++++++|+++|+  ..|++..|+......+.+...  ..+.++.++.+|++|++++.++++  
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            34568999999999999999999999874  278888887654333221100  011278899999999999998886  


Q ss_pred             -----CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCcc
Q 020110           80 -----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        80 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                           ++|++||+||....     +...+++...+++|+.++.++++++    ++.+..++|++||..+..+.+..    
T Consensus       110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~----  185 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTG----  185 (287)
T ss_dssp             CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC----
T ss_pred             HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCC----
Confidence                 47999999997542     1123445788999999999999987    34466799999998665433321    


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccC
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (331)
                                      ..|+.+|...+.+.+.++.+   .|+++++++||.+.++..................       
T Consensus       186 ----------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-------  242 (287)
T 3rku_A          186 ----------------SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYK-------  242 (287)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHT-------
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhc-------
Confidence                            37999999999999998877   5899999999999887421000000111111111       


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCCCC--Cc-eEEEec
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESPAA--SG-RYLCTN  255 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~~~--~g-~~~~~~  255 (331)
                        ....+.++|+|++++.++.....  .| .+++.+
T Consensus       243 --~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~  276 (287)
T 3rku_A          243 --DTTPLMADDVADLIVYATSRKQNTVIADTLIFPT  276 (287)
T ss_dssp             --TSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             --ccCCCCHHHHHHHHHHHhCCCCCeEecceEEeeC
Confidence              12345899999999999986643  24 454443

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.89  E-value=5.7e-22  Score=167.30  Aligned_cols=220  Identities=15%  Similarity=0.139  Sum_probs=154.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEe-cCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhcC-----
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEG-----   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----   80 (331)
                      ++|++|||||+|+||++++++|+++|+ +|+++. |+........ ++..... ++.++.+|+++.+++.++++.     
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhcCC-ceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            357999999999999999999999999 988864 4433222211 1111122 788999999999888776642     


Q ss_pred             --------ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccc
Q 020110           81 --------CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        81 --------~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                              +|++||+||......    ..+.....+++|+.++.++++++...  +..++|++||..+..+.+..     
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----  158 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF-----  158 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTB-----
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCc-----
Confidence                    899999999754321    22334667899999999999998765  34589999998664433221     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                     ..|+.+|...+.+.+.++.+   .++++.+++||.+.++....... ............      
T Consensus       159 ---------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~------  216 (255)
T 3icc_A          159 ---------------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS-DPMMKQYATTIS------  216 (255)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT-SHHHHHHHHHTS------
T ss_pred             ---------------chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc-cHHHHHhhhccC------
Confidence                           37999999999999988766   48999999999999886543211 111111222221      


Q ss_pred             CCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      ....+.+++|+|+++.+++...  ...| .+++.++
T Consensus       217 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (255)
T 3icc_A          217 AFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG  252 (255)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCC
Confidence            2345788999999999888643  3456 4555543

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.89  E-value=5.8e-22  Score=170.19  Aligned_cols=217  Identities=16%  Similarity=0.148  Sum_probs=152.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC-Cccchhhc-CCCCCCCcEEEEEccCCC----chHHHHHhc--
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFA-LPGAGDANLRVFEADVLD----SGAVSRAVE--   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~-~~~~~~~~~~~~~~Dl~~----~~~~~~~~~--   79 (331)
                      +.|++|||||+|+||++++++|+++|+ +|++++|+. .....+.. +....+.++.++.+|+++    ++++.++++  
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            457999999999999999999999999 999999986 33222211 100011178899999999    888777665  


Q ss_pred             -----CccEEEEcccCCCCCCC--------------CCchhhhhHHHHHHHHHHHHHHHhC----C------CCEEEEeC
Q 020110           80 -----GCKGVFHVASPCTLEDP--------------VDPEKELILPAVQGTLNVLEAAKRF----G------VRRVVVTS  130 (331)
Q Consensus        80 -----~~d~vih~a~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~----~------~~~~v~~S  130 (331)
                           ++|+|||+||.......              .+++...+++|+.++.++++++...    +      ..++|++|
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is  180 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC  180 (288)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence                 68999999997543221              1223567899999999999887543    2      45899999


Q ss_pred             ccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhH
Q 020110          131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASC  207 (331)
Q Consensus       131 S~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~  207 (331)
                      |..+..+.+..                    ..|+.+|...+.+.+.++.+   .|+++++++||.++++. . . .  .
T Consensus       181 S~~~~~~~~~~--------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~--~  235 (288)
T 2x9g_A          181 DAMVDQPCMAF--------------------SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-G--E  235 (288)
T ss_dssp             CTTTTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-C--H
T ss_pred             cccccCCCCCC--------------------chHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-C--h
Confidence            97554322221                    37999999999999888765   38999999999999987 2 1 1  1


Q ss_pred             HHHHHHHcCCCCccCcCCCCc-eeHHHHHHHHHHhhcCC--CCCceE-EEecc
Q 020110          208 AVLQQLLQGSKDTQEYHWLGA-VPVKDVAKAQVLLFESP--AASGRY-LCTNG  256 (331)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~-v~v~D~a~a~~~~l~~~--~~~g~~-~~~~~  256 (331)
                      .....+....+      ...+ ..++|+|+++++++...  ...|.+ .+.++
T Consensus       236 ~~~~~~~~~~p------~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  282 (288)
T 2x9g_A          236 EEKDKWRRKVP------LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG  282 (288)
T ss_dssp             HHHHHHHHTCT------TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhhCC------CCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcc
Confidence            12222222221      1234 78999999999998753  345644 55443

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.89  E-value=6.6e-23  Score=172.61  Aligned_cols=212  Identities=17%  Similarity=0.126  Sum_probs=152.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC-CCCCCCcEEEEEccC--CCchHHHHHhc----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAGDANLRVFEADV--LDSGAVSRAVE----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl--~~~~~~~~~~~----   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+.......... ....+.++.++.+|+  ++.+++.++++    
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999 999999976543332211 000111578899999  88888877765    


Q ss_pred             ---CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ---~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                         ++|++||+||....     +...+++...+++|+.++.++++++    ++.+..++|++||..+..+.+..      
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------  162 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANW------  162 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTC------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCC------
Confidence               68999999997432     1222334678999999999999987    45566799999998665433221      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHcC--CeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG--VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~--~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                    ..|+.+|...+.+.+.++.+.+  +++..+.||.+.++..           .......      ..
T Consensus       163 --------------~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~-----------~~~~~~~------~~  211 (252)
T 3f1l_A          163 --------------GAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR-----------ASAFPTE------DP  211 (252)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH-----------HHHCTTC------CG
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh-----------hhhCCcc------ch
Confidence                          3799999999999999987764  8999999998866421           1111111      12


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g-~~~~~~~  256 (331)
                      ..+..++|+|.++++++....  ..| .+.+.++
T Consensus       212 ~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG  245 (252)
T 3f1l_A          212 QKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPG  245 (252)
T ss_dssp             GGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC
T ss_pred             hccCCHHHHHHHHHHHcCccccCCCCCEEEeCCC
Confidence            346788999999999887543  456 4555443

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.89  E-value=3.8e-22  Score=169.41  Aligned_cols=227  Identities=16%  Similarity=0.145  Sum_probs=155.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCC-CCCcEEEEEccCCCchHHHHHhc---Cc
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE---GC   81 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~---~~   81 (331)
                      .+.|++|||||+|+||++++++|+++|+ +|++.+|+........+ +... .+..+..+.+|+++++++.++++   ++
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   86 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV   86 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence            4467999999999999999999999999 99999997654332211 1000 01167889999999998888775   68


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |++||+||......    ..+++...+++|+.++.++.+++    ++.+..++|++||..++.+.+..            
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  154 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEM------------  154 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTC------------
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcc------------
Confidence            99999999765422    22334667999999988877765    34556789999998665433221            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCC-------CC-ChhHHHHHHHHcCCCCccC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQP-------YL-NASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~-------~~-~~~~~~~~~~~~~~~~~~~  222 (331)
                              ..|+.+|...+.+.+.++.+.   ++++.++.||.+.++....       .. ................  .
T Consensus       155 --------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  224 (267)
T 3t4x_A          155 --------AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRP--T  224 (267)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCT--T
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCC--c
Confidence                    379999999999999988764   6999999999998763110       00 0001111111111000  0


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESP--AASG-RYLCTNG  256 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~--~~~g-~~~~~~~  256 (331)
                      .....+.+++|+|+++++++...  ...| .+++.++
T Consensus       225 ~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  261 (267)
T 3t4x_A          225 SIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGG  261 (267)
T ss_dssp             CSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccccCccCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence            02356899999999999988743  3456 4566543

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.88  E-value=3.7e-22  Score=170.53  Aligned_cols=211  Identities=18%  Similarity=0.146  Sum_probs=148.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC-CCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-GAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+........... ...+..+.++.+|++|++++.++++       
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999 9999999765433322110 0011135899999999998887775       


Q ss_pred             CccEEEEcccCCCCC-----CCCCchhhhhHHHHHHHHHHHHHHHhC----C--CCEEEEeCccceeccCCCCCCccccC
Q 020110           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF----G--VRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 ~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                      .+|++||+||.....     ...+++...+++|+.++.++.+++...    +  ..++|++||..+..+.++.       
T Consensus       111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~-------  183 (281)
T 4dry_A          111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNS-------  183 (281)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTC-------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCC-------
Confidence            579999999975431     223445778999999988888876432    2  4689999998664433221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc-C
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY-H  224 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  224 (331)
                                   ..|+.+|...+.+.+.++.+   +++++.+++||.+.++.....           .......... .
T Consensus       184 -------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-----------~~~~~~~~~~~~  239 (281)
T 4dry_A          184 -------------APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARM-----------STGVLQANGEVA  239 (281)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------------------CEEECTTSCEE
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhh-----------cchhhhhhhccc
Confidence                         37999999999999988765   589999999999988753211           0000000111 2


Q ss_pred             CCCceeHHHHHHHHHHhhcCCCCCce
Q 020110          225 WLGAVPVKDVAKAQVLLFESPAASGR  250 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~~~~g~  250 (331)
                      ...++.++|+|+++++++..+....+
T Consensus       240 ~~~~~~pedvA~~v~fL~s~~~~~~i  265 (281)
T 4dry_A          240 AEPTIPIEHIAEAVVYMASLPLSANV  265 (281)
T ss_dssp             ECCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred             ccCCCCHHHHHHHHHHHhCCCccCcc
Confidence            23478999999999999988766553

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.88  E-value=3.8e-22  Score=167.63  Aligned_cols=202  Identities=13%  Similarity=0.086  Sum_probs=145.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC---CCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP---GAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+........+..   .....++.++.+|++|++++.++++    
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            3467999999999999999999999999 9999999765433322110   0010178899999999998887765    


Q ss_pred             ---CccEEEEcccCCCCCCC---CCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 ---GCKGVFHVASPCTLEDP---VDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                         ++|++||+||.......   .+++...+++|+.++.++++++.    +.+..++|++||..+.++...         
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  154 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFAD---------  154 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CC---------
T ss_pred             hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCC---------
Confidence               58999999997654222   22346789999999999999873    345679999999866543221         


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                 ...|+.+|...+.+.+.++.+.   |+++.+++||.+.++...           ..  ....    ...
T Consensus       155 -----------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~-----------~~--~~~~----~~~  206 (250)
T 3nyw_A          155 -----------GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAK-----------KA--GTPF----KDE  206 (250)
T ss_dssp             -----------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH-----------HT--TCCS----CGG
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhh-----------hc--CCCc----ccc
Confidence                       1379999999999998887663   899999999998765311           10  1111    124


Q ss_pred             CceeHHHHHHHHHHhhcCCC
Q 020110          227 GAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~~  246 (331)
                      .+++++|+|++++.++..+.
T Consensus       207 ~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          207 EMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             GSBCHHHHHHHHHHHHTSCT
T ss_pred             cCCCHHHHHHHHHHHHcCCC
Confidence            57899999999999998654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.88  E-value=5.2e-21  Score=157.57  Aligned_cols=215  Identities=16%  Similarity=0.112  Sum_probs=155.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc---CccE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKG   83 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   83 (331)
                      .+.|++|||||++.||+.+++.|.++|+ +|++.+|+........      ..++..+.+|++|+++++++++   ++|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   81 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPR------HPRIRREELDITDSQRLQRLFEALPRLDV   81 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCC------CTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhh------cCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            3578999999999999999999999999 9999999865433221      1178999999999999888775   5899


Q ss_pred             EEEcccCCCC--CCCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           84 VFHVASPCTL--EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        84 vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      +||+||....  +...++++..+++|+.++..+.+++...   +-.++|++||..+..+.++.                 
T Consensus        82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~-----------------  144 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADR-----------------  144 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSC-----------------
T ss_pred             EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCC-----------------
Confidence            9999997543  2233456888999999999888876433   23689999998665544332                 


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHH
Q 020110          159 SRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA  235 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  235 (331)
                         ..|+.+|.....+.+.++.+   +||++..+-||.+..|...... .......++....|.      .-+-..+|+|
T Consensus       145 ---~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~-~~~~~~~~~~~~~Pl------gR~g~peeiA  214 (242)
T 4b79_A          145 ---PAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK-ADVEATRRIMQRTPL------ARWGEAPEVA  214 (242)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----C-CCHHHHHHHHHTCTT------CSCBCHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc-CCHHHHHHHHhcCCC------CCCcCHHHHH
Confidence               26999999999888887755   4899999999999888643221 122333444443322      2356789999


Q ss_pred             HHHHHhhcCC--CCCce-EEEec
Q 020110          236 KAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       236 ~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                      .++++++...  ..+|. ..+.|
T Consensus       215 ~~v~fLaSd~a~~iTG~~l~VDG  237 (242)
T 4b79_A          215 SAAAFLCGPGASFVTGAVLAVDG  237 (242)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhCchhcCccCceEEECc
Confidence            9999888543  34564 44443

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.88  E-value=3.4e-21  Score=168.85  Aligned_cols=214  Identities=21%  Similarity=0.208  Sum_probs=152.3

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh--------hcCCCCCCCcEEEEEccCCCchHHHHH
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL--------FALPGAGDANLRVFEADVLDSGAVSRA   77 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~~~Dl~~~~~~~~~   77 (331)
                      ..++|+||||||+|.||++++++|+++|+ +|++++|+......+        .++..... ++.++.+|++|++++.++
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG-KALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHH
Confidence            34568999999999999999999999999 999999987643211        11111122 788999999999988887


Q ss_pred             hc-------CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCC
Q 020110           78 VE-------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWK  142 (331)
Q Consensus        78 ~~-------~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  142 (331)
                      ++       ++|+|||+||......    ..+.+...+++|+.++.++++++    ++.+..+||++||...+.+...  
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~--  197 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF--  197 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC--
Confidence            75       6899999999765422    22334778999999999999988    3445679999999755432110  


Q ss_pred             CccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc
Q 020110          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (331)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (331)
                                      .....|+.+|...+.+.+.++.+.  ++++.++.|+.+....          +... ..+..  
T Consensus       198 ----------------~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~----------~~~~-~~~~~--  248 (346)
T 3kvo_A          198 ----------------KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA----------AMDM-LGGPG--  248 (346)
T ss_dssp             ----------------SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH----------HHHH-HCC----
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH----------HHHh-hcccc--
Confidence                            011379999999999999988774  7999999998533221          1111 11110  


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCC-CCCceEEEec
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESP-AASGRYLCTN  255 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~-~~~g~~~~~~  255 (331)
                         ....+..++|+|++++.++... ...|.+++.+
T Consensus       249 ---~~~r~~~pedvA~~v~~L~s~~~~itG~~ivdg  281 (346)
T 3kvo_A          249 ---IESQCRKVDIIADAAYSIFQKPKSFTGNFVIDE  281 (346)
T ss_dssp             ---CGGGCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             ---ccccCCCHHHHHHHHHHHHhcCCCCCceEEECC
Confidence               1234668899999999999762 2356555544

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.88  E-value=1.8e-22  Score=170.14  Aligned_cols=218  Identities=11%  Similarity=0.076  Sum_probs=144.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHH----HhcCccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSR----AVEGCKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~----~~~~~d~v   84 (331)
                      ||++|||||+|+||++++++|+++|+ +|++++|+........++..... ++..+  |..+.+.+.+    .+.++|++
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~--d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYP-QLKPM--SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCT-TSEEC--CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCC-cEEEE--CHHHHHHHHHHHHHHhCCCCEE
Confidence            57899999999999999999999999 99999997655433322100011 33333  4443322221    12368999


Q ss_pred             EEcccCC-CCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           85 FHVASPC-TLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        85 ih~a~~~-~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      ||+||.. ...    ...+++...+++|+.++.++++++.    +.+..++|++||..++.+.+..              
T Consensus        77 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  142 (254)
T 1zmt_A           77 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKEL--------------  142 (254)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTC--------------
T ss_pred             EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCc--------------
Confidence            9999976 321    1223457789999999999988774    3456799999997554432221              


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChh-----HHHHHHHHcCCCCccCcCCCC
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS-----CAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  227 (331)
                            ..|+.+|...+.+.+.++.+   +|+++++++||.++|+.........     ......+....      ....
T Consensus       143 ------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~------p~~~  210 (254)
T 1zmt_A          143 ------STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT------ALQR  210 (254)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS------SSSS
T ss_pred             ------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccC------CCCC
Confidence                  37999999999999988766   3899999999999888643221100     01111111111      1234


Q ss_pred             ceeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 020110          228 AVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~--~~g~-~~~~~~  256 (331)
                      +.+++|+|++++.++....  ..|. +.+.++
T Consensus       211 ~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG  242 (254)
T 1zmt_A          211 LGTQKELGELVAFLASGSCDYLTGQVFWLAGG  242 (254)
T ss_dssp             CBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            7899999999999887543  3564 455554

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.88  E-value=3.1e-21  Score=165.80  Aligned_cols=221  Identities=15%  Similarity=0.130  Sum_probs=153.7

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEe-cCCCccchhhc-CCCCCCCcEEEEEccCCCch---------
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLFA-LPGAGDANLRVFEADVLDSG---------   72 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~---------   72 (331)
                      |...++|++|||||+|+||++++++|+++|+ +|++++ |+........+ +....+.++.++.+|+++++         
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccc
Confidence            4444567999999999999999999999999 999998 87543322211 10000117899999999998         


Q ss_pred             --------HHHHHhc-------CccEEEEcccCCCCCC----C--------------CCchhhhhHHHHHHHHHHHHHHH
Q 020110           73 --------AVSRAVE-------GCKGVFHVASPCTLED----P--------------VDPEKELILPAVQGTLNVLEAAK  119 (331)
Q Consensus        73 --------~~~~~~~-------~~d~vih~a~~~~~~~----~--------------~~~~~~~~~~n~~~~~~l~~~~~  119 (331)
                              ++.++++       .+|++||+||......    .              .+++...+++|+.++.++++++.
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                    8887765       6899999999754321    1              23346789999999999998875


Q ss_pred             h----CC------CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeE
Q 020110          120 R----FG------VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDV  186 (331)
Q Consensus       120 ~----~~------~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~  186 (331)
                      .    .+      ..++|++||..+..+.++.                    ..|+.+|...+.+.+.++.+   +|+++
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--------------------~~Y~asKaa~~~l~~~la~e~~~~gI~v  222 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGY--------------------TIYTMAKGALEGLTRSAALELAPLQIRV  222 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcCCCCCC--------------------chhHHHHHHHHHHHHHHHHHHHhcCeEE
Confidence            3    34      5789999997554332221                    37999999999999888765   48999


Q ss_pred             EEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC-CceeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL-GAVPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       187 ~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      ++++||.+..+. .  ..  ......+....+      .. .+..++|+|+++++++...  ...|. +.+.++
T Consensus       223 n~v~PG~v~T~~-~--~~--~~~~~~~~~~~p------~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  285 (291)
T 1e7w_A          223 NGVGPGLSVLVD-D--MP--PAVWEGHRSKVP------LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  285 (291)
T ss_dssp             EEEEESSBCCGG-G--SC--HHHHHHHHTTCT------TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEeeCCccCCc-c--CC--HHHHHHHHhhCC------CCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCC
Confidence            999999998775 2  11  222223322211      12 4678999999999988643  34564 455443

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.88  E-value=1.3e-22  Score=170.20  Aligned_cols=205  Identities=17%  Similarity=0.168  Sum_probs=133.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHH---HHHh---cCc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAV---SRAV---EGC   81 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~---~~~~---~~~   81 (331)
                      ++|++|||||+|+||++++++|++ |+ .|++++|+......+.+.    . ++.++.+|+++.+..   .+.+   .++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~----~-~~~~~~~D~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEI----E-GVEPIESDIVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTS----T-TEEEEECCHHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhh----c-CCcceecccchHHHHHHHHHHHHhcCCC
Confidence            357999999999999999999987 88 999999976554444432    1 788999999876431   1222   358


Q ss_pred             cEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |+|||+||......    ..++....+++|+.++.++++++.    +.+ .++|++||..++.+.+..            
T Consensus        77 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~------------  143 (245)
T 3e9n_A           77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGN------------  143 (245)
T ss_dssp             SEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------C------------
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCc------------
Confidence            99999999765422    122346778999999888888763    324 689999998665433221            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                              ..|+.+|...+.+.+.++.+   .|+++++++||.+.++.......       .....      .....+++
T Consensus       144 --------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~------~~~~~~~~  202 (245)
T 3e9n_A          144 --------TIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMD-------SQGTN------FRPEIYIE  202 (245)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------CCGGGSC
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhh-------hhhcc------cccccCCC
Confidence                    37999999999999988865   58999999999999875432100       00000      12345789


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEE
Q 020110          231 VKDVAKAQVLLFESPAASGRYLC  253 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~~~g~~~~  253 (331)
                      ++|+|++++.++..+....++++
T Consensus       203 p~dvA~~i~~l~~~~~~~~~~~i  225 (245)
T 3e9n_A          203 PKEIANAIRFVIDAGETTQITNV  225 (245)
T ss_dssp             HHHHHHHHHHHHTSCTTEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCccceeee
Confidence            99999999999988765556654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.88  E-value=1.2e-20  Score=161.62  Aligned_cols=209  Identities=21%  Similarity=0.218  Sum_probs=150.0

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh--------hcCCCCCCCcEEEEEccCCCchHHHHHh
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL--------FALPGAGDANLRVFEADVLDSGAVSRAV   78 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   78 (331)
                      .+.|++|||||+|+||++++++|+++|+ +|++++|+......+        .++..... ++.++.+|++|++++.+++
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHH
Confidence            3467999999999999999999999999 999999987642221        11111112 7899999999999888777


Q ss_pred             c-------CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCC
Q 020110           79 E-------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKG  143 (331)
Q Consensus        79 ~-------~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~  143 (331)
                      +       ++|++||+||......    ..++....+++|+.++.++++++...    +..++|++||..+..+...   
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---  161 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL---  161 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC---
Confidence            5       6899999999765422    22334677889999999999988654    4569999999755433211   


Q ss_pred             ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc
Q 020110          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (331)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (331)
                                      ....|+.+|...+.+.+.++.+   +|+++++++||.+...          .+.........  
T Consensus       162 ----------------~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t----------~~~~~~~~~~~--  213 (285)
T 3sc4_A          162 ----------------RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT----------AAVQNLLGGDE--  213 (285)
T ss_dssp             ----------------CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC----------HHHHHHHTSCC--
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc----------HHHHhhccccc--
Confidence                            0137999999999999988876   5899999999843221          11122222111  


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCCC-CCceE
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESPA-ASGRY  251 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~~-~~g~~  251 (331)
                         ....+...+|+|++++.++.... ..|..
T Consensus       214 ---~~~r~~~pedvA~~~~~l~s~~~~~tG~~  242 (285)
T 3sc4_A          214 ---AMARSRKPEVYADAAYVVLNKPSSYTGNT  242 (285)
T ss_dssp             ---CCTTCBCTHHHHHHHHHHHTSCTTCCSCE
T ss_pred             ---cccCCCCHHHHHHHHHHHhCCcccccceE
Confidence               12356788999999999997664 34544

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.88  E-value=6.6e-21  Score=158.07  Aligned_cols=208  Identities=16%  Similarity=0.106  Sum_probs=153.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Ccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   82 (331)
                      |+||||||++.||+++++.|+++|+ +|++.+|+......+.+.   .. ++.++++|++|+++++++++       ++|
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD   77 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKE---RP-NLFYFHGDVADPLTLKKFVEYAMEKLQRID   77 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTT---CT-TEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh---cC-CEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999 999999976554443332   22 78999999999998887764       589


Q ss_pred             EEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        83 ~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      ++||+||....    +...++++..+++|+.++..+.+++...   +-.++|++||..+..+.++.              
T Consensus        78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~--------------  143 (247)
T 3ged_A           78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDS--------------  143 (247)
T ss_dssp             EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTC--------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCC--------------
Confidence            99999987654    2234556888999999999888876432   23689999998665443332              


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHH
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  233 (331)
                            ..|+.+|.....+.+.++.+.  ++++..+-||.+-.+.....   .    .+.....|      ..-+...+|
T Consensus       144 ------~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~---~----~~~~~~~P------l~R~g~ped  204 (247)
T 3ged_A          144 ------EAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF---T----QEDCAAIP------AGKVGTPKD  204 (247)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C---C----HHHHHTST------TSSCBCHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH---H----HHHHhcCC------CCCCcCHHH
Confidence                  269999999998888877654  79999999999977654321   1    11122211      123567899


Q ss_pred             HHHHHHHhhcCCCCCceE-EEec
Q 020110          234 VAKAQVLLFESPAASGRY-LCTN  255 (331)
Q Consensus       234 ~a~a~~~~l~~~~~~g~~-~~~~  255 (331)
                      +|.++++++.+...+|.. .+.|
T Consensus       205 iA~~v~fL~s~~~iTG~~i~VDG  227 (247)
T 3ged_A          205 ISNMVLFLCQQDFITGETIIVDG  227 (247)
T ss_dssp             HHHHHHHHHHCSSCCSCEEEEST
T ss_pred             HHHHHHHHHhCCCCCCCeEEECc
Confidence            999999999876667754 4443

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.88  E-value=2.1e-21  Score=165.95  Aligned_cols=219  Identities=18%  Similarity=0.125  Sum_probs=153.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+......+....  .. ++.++.+|+++++++.++++       .
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAH--GG-NAVGVVGDVRSLQDQKRAAERCLAAFGK   79 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT--BT-TEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHc--CC-cEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            467999999999999999999999999 9999999765443333221  12 78999999999988877765       5


Q ss_pred             ccEEEEcccCCCCCCC-----CC----chhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccC
Q 020110           81 CKGVFHVASPCTLEDP-----VD----PEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~-----~~----~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                      +|++||+||.......     .+    .+...+++|+.++.++++++...   +-.++|++||..+..+.+..       
T Consensus        80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  152 (281)
T 3zv4_A           80 IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGG-------  152 (281)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSC-------
T ss_pred             CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCC-------
Confidence            7999999997543111     11    24667889999999999987443   22689999998665443322       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCCChh-H------HHHHHHHcCCCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNAS-C------AVLQQLLQGSKD  219 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~-~------~~~~~~~~~~~~  219 (331)
                                   ..|+.+|...+.+.+.++.+.  .+++..+.||.+.++......... .      .....+....  
T Consensus       153 -------------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  217 (281)
T 3zv4_A          153 -------------PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVL--  217 (281)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTC--
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcC--
Confidence                         269999999999999988664  399999999999987542211000 0      0111111111  


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCCC---CCce-EEEecc
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESPA---ASGR-YLCTNG  256 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~~---~~g~-~~~~~~  256 (331)
                          ....+..++|+|+++++++..+.   ..|. +.+.++
T Consensus       218 ----p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG  254 (281)
T 3zv4_A          218 ----PIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGG  254 (281)
T ss_dssp             ----TTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSS
T ss_pred             ----CCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCC
Confidence                23457889999999999987332   4664 455443

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.87  E-value=1.5e-21  Score=165.76  Aligned_cols=221  Identities=17%  Similarity=0.127  Sum_probs=157.6

Q ss_pred             cCCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhhcCCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         7 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      .+.|++|||||+  |+||++++++|++.|+ +|+++.|+....  ....++....+.++.++.+|++|++++.++++   
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV   96 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence            356799999999  9999999999999999 999988876543  22222111111278999999999998887775   


Q ss_pred             ----CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ----GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ----~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                          .+|++||+||......    ..+++...+++|+.++.++++++    ++.+..++|++||..+.++....      
T Consensus        97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  170 (267)
T 3gdg_A           97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQ------  170 (267)
T ss_dssp             HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSS------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCC------
Confidence                4799999999765422    23345778999999999999987    44456799999997654432110      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHcC--CeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG--VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~--~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                  ....|+.+|...+.+.+.++.+.+  +++..+.||.+..+.....   .......+....      ..
T Consensus       171 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------~~  229 (267)
T 3gdg_A          171 ------------EQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV---PKETQQLWHSMI------PM  229 (267)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS---CHHHHHHHHTTS------TT
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC---CHHHHHHHHhcC------CC
Confidence                        113799999999999999987764  8999999999988754321   112222222222      23


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                      ..+.+++|+|++++.++...  ...|. +++.+
T Consensus       230 ~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdg  262 (267)
T 3gdg_A          230 GRDGLAKELKGAYVYFASDASTYTTGADLLIDG  262 (267)
T ss_dssp             SSCEETHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred             CCCcCHHHHHhHhheeecCccccccCCEEEECC
Confidence            56788999999999988653  34564 45544

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.87  E-value=7.2e-22  Score=169.47  Aligned_cols=201  Identities=15%  Similarity=0.068  Sum_probs=144.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC-CCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-GAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      ++|+||||||+|+||++++++|+++|+ +|++++|+......+.... .....++.++.+|++|.+++.++++       
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999 9999999765433222110 0011168899999999988887765       


Q ss_pred             CccEEEEc-ccCCCCCC---CCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHV-ASPCTLED---PVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~-a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      ++|+|||+ |+......   ..++....+++|+.++.++++++...   +.+++|++||..+..+.+.            
T Consensus       106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  173 (286)
T 1xu9_A          106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM------------  173 (286)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT------------
T ss_pred             CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCC------------
Confidence            68999999 56543211   12234677999999999999887442   2369999999755433221            


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHc-----CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-----GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                              ...|+.+|...+.+.+.++.+.     ++++++++||.+.++...           ....+      .....
T Consensus       174 --------~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~-----------~~~~~------~~~~~  228 (286)
T 1xu9_A          174 --------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM-----------KAVSG------IVHMQ  228 (286)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH-----------HHSCG------GGGGG
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH-----------Hhccc------cccCC
Confidence                    1379999999999998876553     899999999988765311           10011      11235


Q ss_pred             ceeHHHHHHHHHHhhcCCC
Q 020110          228 AVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~~  246 (331)
                      +++++|+|++++.++....
T Consensus       229 ~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          229 AAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             CBCHHHHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHhcCC
Confidence            6899999999999987653

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.87  E-value=9.5e-22  Score=163.91  Aligned_cols=226  Identities=13%  Similarity=0.084  Sum_probs=158.4

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      |+.|-+.+.|++|||||++.||+++++.|.++|+ +|++.+|+........ ++...+. ++..+.+|++|+++++++++
T Consensus         1 Ms~~f~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~   78 (255)
T 4g81_D            1 MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFS   78 (255)
T ss_dssp             --CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHH
Confidence            5655456789999999999999999999999999 9999998765433322 1111122 78999999999998887764


Q ss_pred             -------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH-----hCCCCEEEEeCccceeccCCCCCC
Q 020110           80 -------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK-----RFGVRRVVVTSSISAIVPNPGWKG  143 (331)
Q Consensus        80 -------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~SS~~~~~~~~~~~~  143 (331)
                             ++|++||+||.....    ...++++..+++|+.++..+.+++.     +.+-.++|++||..+..+.++.  
T Consensus        79 ~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~--  156 (255)
T 4g81_D           79 KLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTV--  156 (255)
T ss_dssp             HHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTC--
T ss_pred             HHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCc--
Confidence                   479999999976542    2345568889999999999888663     2344689999998665443332  


Q ss_pred             ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc
Q 020110          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (331)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (331)
                                        ..|+.+|.....+.+.++.+   +||++..+-||.+..+...... ........+....|. 
T Consensus       157 ------------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~Pl-  216 (255)
T 4g81_D          157 ------------------APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALI-EDKQFDSWVKSSTPS-  216 (255)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHH-TCHHHHHHHHHHSTT-
T ss_pred             ------------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhccc-CCHHHHHHHHhCCCC-
Confidence                              36999999999888887755   4899999999999877532100 001112222222222 


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                           .-+...+|+|.++++++...  ...|. +.+.|
T Consensus       217 -----~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDG  249 (255)
T 4g81_D          217 -----QRWGRPEELIGTAIFLSSKASDYINGQIIYVDG  249 (255)
T ss_dssp             -----CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -----CCCcCHHHHHHHHHHHhCchhCCCcCCEEEECC
Confidence                 23567799999999888543  34664 45544

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.87  E-value=1.1e-20  Score=158.21  Aligned_cols=223  Identities=18%  Similarity=0.159  Sum_probs=157.5

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.+.|.+|||||++.||+.+++.|.++|. .|++.+|+........++....+ ++.++.+|++|+++++++++      
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQP-RATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCT-TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCC-CEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999 99999998765443333222223 78899999999988877764      


Q ss_pred             -CccEEEEcccCCCC---CCCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 -GCKGVFHVASPCTL---EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 -~~d~vih~a~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                       ++|++||+||....   +...+++...+++|+.++..+.+++...   +-.++|++||..+..+.+..           
T Consensus        82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~-----------  150 (258)
T 4gkb_A           82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNT-----------  150 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSC-----------
T ss_pred             CCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCc-----------
Confidence             58999999997543   2233456788999999999888876432   23689999998776554442           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCCh---hHHHHHHHHcCCCCccCcCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA---SCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  226 (331)
                               ..|+.+|.....+.+.++.+   +||++..+-||.+-.|........   .......+....|.     .+
T Consensus       151 ---------~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-----g~  216 (258)
T 4gkb_A          151 ---------SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL-----GR  216 (258)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT-----TT
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC-----CC
Confidence                     36999999999888887755   589999999999988764321110   01112222222211     13


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      -+...+|+|.++++++...  ..+|.. .+.|
T Consensus       217 R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDG  248 (258)
T 4gkb_A          217 RFTTPDEIADTAVFLLSPRASHTTGEWLFVDG  248 (258)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCCeEEECC
Confidence            4677899999999888643  346744 4443

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.86  E-value=9e-21  Score=165.35  Aligned_cols=221  Identities=24%  Similarity=0.191  Sum_probs=149.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC------CCCCCcEEEEEccCCCchHHHHHhcC--
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP------GAGDANLRVFEADVLDSGAVSRAVEG--   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~~~~Dl~~~~~~~~~~~~--   80 (331)
                      .|+||||||+|+||++++++|+++|+ +|+.+.|+........+..      ...+.++.++.+|++|.+++.++++.  
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~-~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            46899999999999999999999999 8888877544332221110      00112789999999999999988874  


Q ss_pred             ---ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           81 ---CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        81 ---~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                         +|++||+||.....    ...++....+++|+.++.++++++    ++.+.++||++||..+..+.+..        
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~--------  152 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN--------  152 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTC--------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCC--------
Confidence               89999999975432    122345778999999999999986    34466799999997654432221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhH-----------HHHHHHHc
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASC-----------AVLQQLLQ  215 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~-----------~~~~~~~~  215 (331)
                                  ..|+.+|...+.+.+.++.+   +|+++++++|+.|.++..........           ..+.....
T Consensus       153 ------------~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
T 1jtv_A          153 ------------DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLA  220 (327)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHH
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHH
Confidence                        37999999999999988764   68999999999998876432111000           00000000


Q ss_pred             CCCCccCcCCCCceeHHHHHHHHHHhhcCCCCCceEEE
Q 020110          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLC  253 (331)
Q Consensus       216 ~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~  253 (331)
                      .....   ..+-.+.++|+|++++.++..+.....|+.
T Consensus       221 ~~~~~---~~~~~~~pedvA~~i~~l~~~~~~~~~~~t  255 (327)
T 1jtv_A          221 HSKQV---FREAAQNPEEVAEVFLTALRAPKPTLRYFT  255 (327)
T ss_dssp             HHHHH---HHHHCBCHHHHHHHHHHHHHCSSCCSEEES
T ss_pred             HHHHh---hhhcCCCHHHHHHHHHHHHcCCCCCeEEEe
Confidence            00000   001125899999999999987654445543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.86  E-value=7.6e-22  Score=165.71  Aligned_cols=201  Identities=18%  Similarity=0.152  Sum_probs=145.0

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC-CCCCCCcEEEEEccC--CCchHHHHHhc----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAGDANLRVFEADV--LDSGAVSRAVE----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl--~~~~~~~~~~~----   79 (331)
                      .++|++|||||+|+||++++++|+++|+ +|++++|+........+. ......++.++.+|+  ++.+++.++++    
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            3467999999999999999999999999 999999986543332211 111111566777777  88887776664    


Q ss_pred             ---CccEEEEcccCCCCC-----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 ---GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                         ++|++||+||.....     ...+++...+++|+.++.++++++    ++.+..++|++||..+..+.+..      
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------  164 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANW------  164 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTC------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCc------
Confidence               689999999975321     123445778999999999999988    44456789999997654433221      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                    ..|+.+|...+.+.+.++.+    .++++..++||.+.++..           .+.....      
T Consensus       165 --------------~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~-----------~~~~~~~------  213 (247)
T 3i1j_A          165 --------------GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR-----------AQAYPDE------  213 (247)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH-----------HHHSTTS------
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc-----------hhccccc------
Confidence                          37999999999999988765    479999999998866421           1111110      


Q ss_pred             CCCCceeHHHHHHHHHHhhcCC
Q 020110          224 HWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      ....+...+|+|+++++++...
T Consensus       214 ~~~~~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          214 NPLNNPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             CGGGSCCGGGGTHHHHHHHSGG
T ss_pred             CccCCCCHHHHHHHHHHHhCch
Confidence            1234567899999999988643

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.86  E-value=4.3e-21  Score=162.32  Aligned_cols=211  Identities=18%  Similarity=0.135  Sum_probs=140.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc--------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE--------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------   79 (331)
                      .|++|||||+|+||++++++|+++|+ +|++++|+......... +..... ++.++.+|++|++++.++++        
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGG-QCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSS-EEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCC-ceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999 99999987544322211 100011 68899999999988776653        


Q ss_pred             CccEEEEccc--CC-------C--CCCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCc
Q 020110           80 GCKGVFHVAS--PC-------T--LEDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGK  144 (331)
Q Consensus        80 ~~d~vih~a~--~~-------~--~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  144 (331)
                      .+|++||+||  ..       .  .+...+.+...+++|+.++.++.+++.    +.+..++|++||..+..+.      
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  156 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM------  156 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC------
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC------
Confidence            4699999994  21       1  122334457788899988877776653    4466799999997543211      


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCcc
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (331)
                               +      ...|+.+|...+.+.+.++.+   +|+++++++||.+.++...................    .
T Consensus       157 ---------~------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~  217 (260)
T 2qq5_A          157 ---------F------NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ----F  217 (260)
T ss_dssp             ---------S------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------
T ss_pred             ---------C------CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHH----H
Confidence                     0      127999999999999888754   58999999999998876322100000000000000    0


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      ......+...+|+|+++++++....
T Consensus       218 ~~~~~~~~~pe~va~~v~~l~s~~~  242 (260)
T 2qq5_A          218 KSAFSSAETTELSGKCVVALATDPN  242 (260)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCTT
T ss_pred             HhhhccCCCHHHHHHHHHHHhcCcc
Confidence            0001124678999999999887653

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.86  E-value=1.4e-20  Score=172.07  Aligned_cols=224  Identities=19%  Similarity=0.189  Sum_probs=159.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch---h-hcCCCCCCCcEEEEEccCCCchHHHHHhcCc--
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH---L-FALPGAGDANLRVFEADVLDSGAVSRAVEGC--   81 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--   81 (331)
                      ..++||||||+|+||.+++++|.++|+.+|++++|+......   + .++... +.++.++.+|++|++++.++++++  
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-GARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc-CCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            357999999999999999999999998458999987643211   1 111111 127899999999999999988764  


Q ss_pred             ----cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 ----KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 ----d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                          |+|||+||.....    ...+.....+++|+.++.++.++++..+.++||++||..++++.++.            
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~------------  371 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL------------  371 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC------------
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCC------------
Confidence                9999999976532    12233467789999999999999998888999999998777665443            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHH
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  233 (331)
                              ..|+.+|...+.+...+. ..|+++++++|+.+.+++....     . ...       ........+++.+|
T Consensus       372 --------~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~-----~-~~~-------~~~~~g~~~i~~e~  429 (486)
T 2fr1_A          372 --------GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEG-----P-VAD-------RFRRHGVIEMPPET  429 (486)
T ss_dssp             --------TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-------------------------CTTTTEECBCHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccch-----h-HHH-------HHHhcCCCCCCHHH
Confidence                    379999999998877654 5799999999999887642110     0 000       01112356799999


Q ss_pred             HHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHh
Q 020110          234 VAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKL  270 (331)
Q Consensus       234 ~a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~  270 (331)
                      +++++..++......  +++.  .+.|..+...+...
T Consensus       430 ~a~~l~~~l~~~~~~--~~v~--~~d~~~~~~~~~~~  462 (486)
T 2fr1_A          430 ACRALQNALDRAEVC--PIVI--DVRWDRFLLAYTAQ  462 (486)
T ss_dssp             HHHHHHHHHHTTCSS--CEEC--EECHHHHHHHHTSS
T ss_pred             HHHHHHHHHhCCCCe--EEEE--eCCHHHHhhhhccc
Confidence            999999999865432  2222  25677776655443

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.85  E-value=2.8e-20  Score=161.51  Aligned_cols=214  Identities=18%  Similarity=0.137  Sum_probs=145.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh-hcCCCCCCCcEEEEEccCCCc-hHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDS-GAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~-----   79 (331)
                      .++|+||||||+|+||++++++|+++|+ +|++++|+....... .++....+.++.++.+|++++ +++.++++     
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            3457899999999999999999999999 999999986543222 222111222799999999998 77766654     


Q ss_pred             --CccEEEEcccCCCCC----------------------------------CCCCchhhhhHHHHHHHHHHHHHHH----
Q 020110           80 --GCKGVFHVASPCTLE----------------------------------DPVDPEKELILPAVQGTLNVLEAAK----  119 (331)
Q Consensus        80 --~~d~vih~a~~~~~~----------------------------------~~~~~~~~~~~~n~~~~~~l~~~~~----  119 (331)
                        ++|+|||+||.....                                  ...+.....+++|+.++.++++++.    
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence              689999999976321                                  1122335669999999999888774    


Q ss_pred             hCCCCEEEEeCccceeccCCCCCC--------cc----------------ccCCCCCChhhhhccCcchhHHHHHHHHHH
Q 020110          120 RFGVRRVVVTSSISAIVPNPGWKG--------KV----------------FDETSWTDLEYCKSRKKWYPVSKTLAEKAA  175 (331)
Q Consensus       120 ~~~~~~~v~~SS~~~~~~~~~~~~--------~~----------------~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~  175 (331)
                      +.+..++|++||..+..+......        ..                +.+........ ......|+.+|...+.+.
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGW-PSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTC-CSSCHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccC-cccchhhHHHHHHHHHHH
Confidence            345679999999866554321100        00                00000000000 011236999999999999


Q ss_pred             HHHHHHc-CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          176 WEFAEKH-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       176 ~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      +.++++. ++++++++||.|.++....                        ......++.++.++.++..+.
T Consensus       248 ~~la~e~~~i~v~~v~PG~v~T~~~~~------------------------~~~~~~~~~a~~~~~~~~~~~  295 (311)
T 3o26_A          248 RVLANKIPKFQVNCVCPGLVKTEMNYG------------------------IGNYTAEEGAEHVVRIALFPD  295 (311)
T ss_dssp             HHHHHHCTTSEEEEECCCSBCSGGGTT------------------------CCSBCHHHHHHHHHHHHTCCS
T ss_pred             HHHHhhcCCceEEEecCCceecCCcCC------------------------CCCCCHHHHHHHHHHHHhCCC
Confidence            9998775 6999999999998765321                        122567889999888776543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.85  E-value=2e-20  Score=159.32  Aligned_cols=209  Identities=17%  Similarity=0.169  Sum_probs=147.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc----C---CCCCCCcEEEEEccCCCchHHHHHhc-
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA----L---PGAGDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~----~---~~~~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      ++|++|||||+|+||++++++|+++|+ +|++++|+......+..    .   ....+.++.++.+|++|++++.++++ 
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            467999999999999999999999999 99999998654222110    0   00001278899999999998887765 


Q ss_pred             ------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCcc
Q 020110           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        80 ------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                            ++|++||+||.....    ...++....+++|+.++.++.+++..    .+..++|++||..+..+..      
T Consensus        84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------  157 (274)
T 3e03_A           84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW------  157 (274)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH------
T ss_pred             HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC------
Confidence                  689999999976432    12233477889999999999998743    4567999999975533210      


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCc-ccCCCCCCCCChhHHHHHHHHcCCCCcc
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPAT-CLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~-v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (331)
                                  ......|+.+|...+.+.+.++.+   +|+++.++.||. +-.+..            +...+.    
T Consensus       158 ------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~------------~~~~~~----  209 (274)
T 3e03_A          158 ------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI------------NMLPGV----  209 (274)
T ss_dssp             ------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------CC----
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh------------hhcccc----
Confidence                        001137999999999999888765   479999999985 433321            001111    


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCCC--CCceEEE
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~~~  253 (331)
                        ....+..++|+|++++.++....  ..|.++.
T Consensus       210 --~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~  241 (274)
T 3e03_A          210 --DAAACRRPEIMADAAHAVLTREAAGFHGQFLI  241 (274)
T ss_dssp             --CGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEE
T ss_pred             --cccccCCHHHHHHHHHHHhCccccccCCeEEE
Confidence              12236789999999999987643  3565544

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.85  E-value=4.2e-20  Score=155.38  Aligned_cols=219  Identities=17%  Similarity=0.132  Sum_probs=155.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|.+|||||++.||+.+++.|.++|. +|++.+|+........+..  ++ ++..+.+|++|+++++++++       
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~--g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI--GG-GAVGIQADSANLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--CT-TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc--CC-CeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999 9999999865443322211  12 78889999999998887764       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      ++|++||+||.....    ...++++..+++|+.++..+.+++...  +-.++|++||..+..+.+..            
T Consensus       103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~------------  170 (273)
T 4fgs_A          103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAF------------  170 (273)
T ss_dssp             CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTC------------
T ss_pred             CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCc------------
Confidence            479999999975542    234456889999999999999988655  23479999998665444332            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCCh----hHHHHHHHHcCCCCccCcCCC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNA----SCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  226 (331)
                              ..|+.+|.....+.+.++.+.   ||++..+-||.+..+........    ...+...+....|.      .
T Consensus       171 --------~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Pl------g  236 (273)
T 4fgs_A          171 --------SVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM------G  236 (273)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTT------S
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCC------C
Confidence                    379999999999998887664   79999999999988754321111    11222233222222      2


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      -+...+|+|.++++++...  ...|.. .+.|
T Consensus       237 R~g~peeiA~~v~FLaSd~a~~iTG~~i~VDG  268 (273)
T 4fgs_A          237 RVGRAEEVAAAALFLASDDSSFVTGAELFVDG  268 (273)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCCeEeECc
Confidence            3567899999999988643  346644 4444

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.84  E-value=1.3e-19  Score=152.58  Aligned_cols=224  Identities=16%  Similarity=0.103  Sum_probs=156.9

Q ss_pred             ccccCCCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC-CCCCcEEEEEccCCCchHHHHHhc-
Q 020110            4 EAEKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      |.+.+.|++|||||+|  -||.++++.|.++|+ +|++..|+......+.+... ..+.++.++.+|+++++++.++++ 
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence            3445678999999876  899999999999999 99999998655444333221 122268899999999988877764 


Q ss_pred             ------CccEEEEcccCCCCC--------CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCC
Q 020110           80 ------GCKGVFHVASPCTLE--------DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKG  143 (331)
Q Consensus        80 ------~~d~vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~  143 (331)
                            ++|++||+|+.....        ...+++...+++|+.++..+.+++...  +-.++|++||..+..+.++.  
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~--  157 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNY--  157 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTT--
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccc--
Confidence                  589999999865421        111223456788888888888877654  23589999998665443332  


Q ss_pred             ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc
Q 020110          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (331)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (331)
                                        ..|+.+|...+.+.+.++.+   +||++..+.||.+-.+..... .........+....|. 
T Consensus       158 ------------------~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~~~~~~Pl-  217 (256)
T 4fs3_A          158 ------------------NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV-GGFNTILKEIKERAPL-  217 (256)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC-TTHHHHHHHHHHHSTT-
T ss_pred             ------------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc-cCCHHHHHHHHhcCCC-
Confidence                              37999999999888887755   589999999999988764332 2223333444333322 


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                           .-+...+|+|.++++++...  ..+|.. .+.|
T Consensus       218 -----~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDG  250 (256)
T 4fs3_A          218 -----KRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDS  250 (256)
T ss_dssp             -----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -----CCCcCHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence                 23567899999999888643  346644 4443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.84  E-value=3.6e-20  Score=170.04  Aligned_cols=225  Identities=18%  Similarity=0.143  Sum_probs=161.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh----hcCCCCCCCcEEEEEccCCCchHHHHHhcC--c
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVEG--C   81 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~   81 (331)
                      ..++||||||+|+||.+++++|.++|+.+|+++.|+.......    .++... +.++.++.+|++|.+++.+++++  +
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~~~l  336 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH-GCEVVHAACDVAERDALAALVTAYPP  336 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT-TCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc-CCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence            3579999999999999999999999984588888875432111    111111 22789999999999999999875  9


Q ss_pred             cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceeccCCCCCCccccCCCCCChhh
Q 020110           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (331)
Q Consensus        82 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (331)
                      |+|||+||.....    ...+.....+++|+.++.++.+++... +.++||++||..++++.++.               
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~---------------  401 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQ---------------  401 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTB---------------
T ss_pred             cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCC---------------
Confidence            9999999976532    122334667899999999999998877 78899999998776655432               


Q ss_pred             hhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHH
Q 020110          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAK  236 (331)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~  236 (331)
                           ..|+.+|...+.+.+.+. ..|+++++++|+.+-+.+...  ....   ..+..        .....++.+|+++
T Consensus       402 -----~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~--~~~~---~~~~~--------~g~~~l~~e~~a~  462 (511)
T 2z5l_A          402 -----GAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAA--GAGE---ESLSR--------RGLRAMDPDAAVD  462 (511)
T ss_dssp             -----HHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCC--CHHH---HHHHH--------HTBCCBCHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCcccc--cccH---HHHHh--------cCCCCCCHHHHHH
Confidence                 379999999999887664 679999999999874322211  1111   11111        1245789999999


Q ss_pred             HHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhC
Q 020110          237 AQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (331)
Q Consensus       237 a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~  271 (331)
                      ++..++..+..  .+++.  .+.|..+...+....
T Consensus       463 ~l~~al~~~~~--~v~v~--~~d~~~~~~~~~~~~  493 (511)
T 2z5l_A          463 ALLGAMGRNDV--CVTVV--DVDWERFAPATNAIR  493 (511)
T ss_dssp             HHHHHHHHTCS--EEEEC--CBCHHHHHHHHHHHS
T ss_pred             HHHHHHhCCCC--EEEEE--eCCHHHHHhhhcccC
Confidence            99999976532  22333  356777776665443

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.84  E-value=2.2e-20  Score=162.21  Aligned_cols=212  Identities=18%  Similarity=0.133  Sum_probs=143.9

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC---------CCccchh-hcCCCCCCCcEEEEEccCCC
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP---------GSDSSHL-FALPGAGDANLRVFEADVLD   70 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~---------~~~~~~~-~~~~~~~~~~~~~~~~Dl~~   70 (331)
                      |+.....++|++|||||+|+||++++++|+++|+ +|++.+|.         ....... .++...   .. ...+|+.+
T Consensus         1 M~~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~---~~-~~~~D~~~   75 (319)
T 1gz6_A            1 MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRR---GG-KAVANYDS   75 (319)
T ss_dssp             --CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHT---TC-EEEEECCC
T ss_pred             CCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhh---CC-eEEEeCCC
Confidence            4333334568999999999999999999999999 99987653         2211111 111110   11 23589999


Q ss_pred             chHHHHHhc-------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCcccee
Q 020110           71 SGAVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAI  135 (331)
Q Consensus        71 ~~~~~~~~~-------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~  135 (331)
                      .+++.++++       ++|++||+||.....    ...+.+...+++|+.++.++++++    ++.+..++|++||....
T Consensus        76 ~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~  155 (319)
T 1gz6_A           76 VEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI  155 (319)
T ss_dssp             GGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence            887666543       589999999976532    123345778999999999998887    33456799999997666


Q ss_pred             ccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHH
Q 020110          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQ  212 (331)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~  212 (331)
                      ++.++.                    ..|+.+|...+.+.+.++++   +|+++++++|+.+ .+.......        
T Consensus       156 ~~~~~~--------------------~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~--------  206 (319)
T 1gz6_A          156 YGNFGQ--------------------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP--------  206 (319)
T ss_dssp             HCCTTC--------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC--------
T ss_pred             cCCCCC--------------------HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC--------
Confidence            554322                    37999999999999988866   4899999999986 432111000        


Q ss_pred             HHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC-CCc-eEEEecc
Q 020110          213 LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA-ASG-RYLCTNG  256 (331)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~-~~g-~~~~~~~  256 (331)
                                .....++.++|+|.++++++..+. ..| .|.+.++
T Consensus       207 ----------~~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          207 ----------EDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             ----------HHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             ----------hhhhccCCHHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence                      011234678999999999887543 345 4555544

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.83  E-value=1.6e-20  Score=157.18  Aligned_cols=213  Identities=13%  Similarity=0.084  Sum_probs=141.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEE-e--cCCCccchhhcCCCCCCCcEEEEEccCCCchHHH-HHh---cCc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-V--FPGSDSSHLFALPGAGDANLRVFEADVLDSGAVS-RAV---EGC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~---~~~   81 (331)
                      +|++|||||+|+||++++++|+++|+ +|+++ .  |+........+...    +.++.  |..+.+.+. ++.   .++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~----~~~~~--~~~~v~~~~~~~~~~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENP----GTIAL--AEQKPERLVDATLQHGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHST----TEEEC--CCCCGGGHHHHHGGGSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhC----CCccc--CHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 99998 6  87654333322111    23322  444433332 222   258


Q ss_pred             cEEEEcccCCCC---CC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           82 KGVFHVASPCTL---ED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        82 d~vih~a~~~~~---~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      |++||+||....   ..    ..+++...+++|+.++.++++++.    +.+.+++|++||..+..+.+..         
T Consensus        74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~---------  144 (244)
T 1zmo_A           74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYN---------  144 (244)
T ss_dssp             EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTC---------
T ss_pred             CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCc---------
Confidence            999999997543   11    223457789999999999988774    4456799999997654432221         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCC---CCCCChhHHHHHHHHc-CCCCccCc
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLM---QPYLNASCAVLQQLLQ-GSKDTQEY  223 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~---~~~~~~~~~~~~~~~~-~~~~~~~~  223 (331)
                                 ..|+.+|...+.+.+.++.+   +++++++++||.+.++..   ...  .......++.. ..      
T Consensus       145 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~------  205 (244)
T 1zmo_A          145 -----------PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDW--ENNPELRERVDRDV------  205 (244)
T ss_dssp             -----------TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHH--HHCHHHHHHHHHHC------
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccc--cchHHHHHHHhcCC------
Confidence                       37999999999999888765   489999999999987753   110  00011111111 11      


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCC--CCceE-EEecc
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTNG  256 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~--~~g~~-~~~~~  256 (331)
                      ....+...+|+|++++.++....  ..|.+ .+.++
T Consensus       206 p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          206 PLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             TTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence            12346789999999999987543  34644 45443

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.83  E-value=7.2e-20  Score=151.07  Aligned_cols=220  Identities=19%  Similarity=0.111  Sum_probs=155.2

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccE
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKG   83 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   83 (331)
                      +.+.|++|||||++.||+.+++.|.++|. +|++.+|+..+ ..........+ ++..+.+|++|+++++++++  ++|+
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~-~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~~~g~iDi   82 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPD-ETLDIIAKDGG-NASALLIDFADPLAAKDSFTDAGFDI   82 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCH-HHHHHHHHTTC-CEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHH-HHHHHHHHhCC-cEEEEEccCCCHHHHHHHHHhCCCCE
Confidence            35678999999999999999999999999 99999987542 11222212222 78999999999998887775  3899


Q ss_pred             EEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHh----CC-CCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           84 VFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        84 vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +||+||....    +...++++..+++|+.++..+.+++..    .+ -.++|++||..+..+.++.             
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~-------------  149 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRV-------------  149 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSC-------------
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCC-------------
Confidence            9999997654    223455688999999999998886532    22 4689999998665544332             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                             ..|+.+|.....+.+.++.+   +||++..+-||.+-.|..... .........+....|.      .-+-..
T Consensus       150 -------~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~-~~~~~~~~~~~~~~Pl------gR~g~p  215 (247)
T 4hp8_A          150 -------PSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEAL-RADAARNKAILERIPA------GRWGHS  215 (247)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HTSHHHHHHHHTTCTT------SSCBCT
T ss_pred             -------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhc-ccCHHHHHHHHhCCCC------CCCcCH
Confidence                   26999999988888877755   489999999999987753210 0011122223332222      235567


Q ss_pred             HHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          232 KDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       232 ~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      +|+|.++++++...  ..+|.. .+.|
T Consensus       216 eeiA~~v~fLaSd~a~~iTG~~i~VDG  242 (247)
T 4hp8_A          216 EDIAGAAVFLSSAAADYVHGAILNVDG  242 (247)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCchhcCCcCCeEEECc
Confidence            99999999888643  245644 4443

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.83  E-value=2.5e-19  Score=150.37  Aligned_cols=215  Identities=16%  Similarity=0.129  Sum_probs=149.5

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.+.|++|||||++.||+++++.|.++|+ +|++..|+..+..  .        ...++++|+++++++.++++      
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~--~--------~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEGL--P--------EELFVEADLTTKEGCAIVAEATRQRL   76 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTS--C--------TTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhCC--C--------cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45679999999999999999999999999 9999998754311  1        33468899999988877664      


Q ss_pred             -CccEEEEcccCCCC------CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 -GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 -~~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                       .+|++||+||....      +...++++..+++|+.++..+.+++.    +.+-.++|++||..+..+.+..       
T Consensus        77 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~-------  149 (261)
T 4h15_A           77 GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPES-------  149 (261)
T ss_dssp             SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTT-------
T ss_pred             CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCc-------
Confidence             47999999986432      12234567889999999988888763    3355789999997654433211       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCC---------CCC--hhHHHHHHHH
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP---------YLN--ASCAVLQQLL  214 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~---------~~~--~~~~~~~~~~  214 (331)
                                  ...|+.+|...+.+.+.++.+   +|+++..+.||.+-.+....         ...  .....+....
T Consensus       150 ------------~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (261)
T 4h15_A          150 ------------TTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGL  217 (261)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHT
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHh
Confidence                        126999999999888888755   58999999999997763210         000  0001111111


Q ss_pred             cCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       215 ~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      ...      ...-+...+|+|+++++++...  ...|. +.+.|+
T Consensus       218 ~~~------PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG  256 (261)
T 4h15_A          218 GGI------PLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGG  256 (261)
T ss_dssp             TCC------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCC------CCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence            111      1234678899999999888543  34564 455554

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.83  E-value=4.6e-20  Score=155.90  Aligned_cols=209  Identities=17%  Similarity=0.122  Sum_probs=144.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHH---CCCCEEEEEecCCCccchhhc-CCCC-CCCcEEEEEccCCCchHHHHHhc----
Q 020110            9 EETVCVTGANGFIGTWLVKTLLD---NNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~---~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      .|++|||||+|+||++++++|++   +|+ +|++++|+........+ +... .+.++.++.+|++|++++.++++    
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            57899999999999999999999   899 99999997644332221 1000 01168899999999988877653    


Q ss_pred             -----Ccc--EEEEcccCCCC--C-----CCCCchhhhhHHHHHHHHHHHHHHHhC------CCCEEEEeCccceeccCC
Q 020110           80 -----GCK--GVFHVASPCTL--E-----DPVDPEKELILPAVQGTLNVLEAAKRF------GVRRVVVTSSISAIVPNP  139 (331)
Q Consensus        80 -----~~d--~vih~a~~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~~SS~~~~~~~~  139 (331)
                           .+|  ++||+||....  .     ...+++...+++|+.++.++++++...      +..++|++||..++.+.+
T Consensus        85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK  164 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT
T ss_pred             ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCC
Confidence                 357  99999997532  1     223445778999999999999988654      234699999986543322


Q ss_pred             CCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc-CCeEEEEcCCcccCCCCCCCCC--hhHHHHHHHHcC
Q 020110          140 GWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQG  216 (331)
Q Consensus       140 ~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~--~~~~~~~~~~~~  216 (331)
                      ..                    ..|+.+|...+.+.+.++.+. +++++++.||.+-.+.......  ........+...
T Consensus       165 ~~--------------------~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  224 (259)
T 1oaa_A          165 GW--------------------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL  224 (259)
T ss_dssp             TC--------------------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHH
T ss_pred             Cc--------------------cHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHh
Confidence            21                    379999999999999998775 4999999999886653110000  000000111100


Q ss_pred             CCCccCcCCCCceeHHHHHHHHHHhhcC
Q 020110          217 SKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       217 ~~~~~~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      .      ....+..++|+|++++.++..
T Consensus       225 ~------p~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          225 K------SDGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             H------HTTCSBCHHHHHHHHHHHHHH
T ss_pred             h------hcCCcCCHHHHHHHHHHHHhh
Confidence            0      123578999999999988864

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.83  E-value=3e-20  Score=157.93  Aligned_cols=219  Identities=15%  Similarity=0.101  Sum_probs=150.5

Q ss_pred             cCCCeEEEeCc--chHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            7 KEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         7 ~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      .++|++|||||  +|+||++++++|+++|+ +|++++|+.... ..+.+..  .. ++.++.+|++|++++.++++    
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~-~~~~~~~Dv~~~~~v~~~~~~~~~   80 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRL--PA-KAPLLELDVQNEEHLASLAGRVTE   80 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTS--SS-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhc--CC-CceEEEccCCCHHHHHHHHHHHHH
Confidence            44679999999  99999999999999999 999999876432 2222221  11 67789999999998887775    


Q ss_pred             ------CccEEEEcccCCCC---------CCCCCchhhhhHHHHHHHHHHHHHHHhCC--CCEEEEeCccceeccCCCCC
Q 020110           80 ------GCKGVFHVASPCTL---------EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWK  142 (331)
Q Consensus        80 ------~~d~vih~a~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~  142 (331)
                            ++|++||+||....         +...+++...+++|+.++.++++++...-  -.++|++||... ++.+.  
T Consensus        81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~~--  157 (269)
T 2h7i_A           81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMPA--  157 (269)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCTT--
T ss_pred             HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccCc--
Confidence                  78999999997541         12233456789999999999999986541  258999998633 22111  


Q ss_pred             CccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCC----CChh-H----HHH
Q 020110          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY----LNAS-C----AVL  210 (331)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~----~~~~-~----~~~  210 (331)
                                   +     ..|+.+|...+.+.+.++.+   +|+++++++||.+.++.....    .... .    ...
T Consensus       158 -------------~-----~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  219 (269)
T 2h7i_A          158 -------------Y-----NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLE  219 (269)
T ss_dssp             -------------T-----HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred             -------------h-----HHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHH
Confidence                         1     37999999999999888765   489999999999877631100    0000 0    011


Q ss_pred             HHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 020110          211 QQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (331)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~-~~~~  255 (331)
                      ..+....+.     .+.+..++|+|+++++++....  ..|.. .+.+
T Consensus       220 ~~~~~~~p~-----~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  262 (269)
T 2h7i_A          220 EGWDQRAPI-----GWNMKDATPVAKTVCALLSDWLPATTGDIIYADG  262 (269)
T ss_dssp             HHHHHHCTT-----CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             HhhhccCCc-----ccCCCCHHHHHHHHHHHhCchhccCcceEEEecC
Confidence            111111111     1136778999999999987543  45644 4544

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.83  E-value=7e-20  Score=166.00  Aligned_cols=216  Identities=17%  Similarity=0.101  Sum_probs=151.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------   79 (331)
                      +.+++|||||+|.||.+++++|.++|+ +|++++|+..... +.+.....  ++.++.+|++|.+++.++++        
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~-l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~g~  287 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAED-LKRVADKV--GGTALTLDVTADDAVDKITAHVTEHHGG  287 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHH-HHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHSTT
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHH-HHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999 9999988643211 11110000  46789999999998887764        


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      .+|+|||+||.....    ...+.+...+++|+.++.++.+++...    +..+||++||..++.+.++.          
T Consensus       288 ~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~----------  357 (454)
T 3u0b_A          288 KVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ----------  357 (454)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTC----------
T ss_pred             CceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCC----------
Confidence            389999999976542    223345778999999999999998765    56799999998776665443          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++.+   .|++++++.||.+.++.............   ...      .....+
T Consensus       358 ----------~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~---~~~------~~l~r~  418 (454)
T 3u0b_A          358 ----------TNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVG---RRL------NSLFQG  418 (454)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHH---HHS------BTTSSC
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHH---Hhh------ccccCC
Confidence                      37999999888888777644   58999999999998875422100000000   011      112345


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          229 VPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      ...+|+|+++.+++...  ...|. +.+.++
T Consensus       419 g~pedvA~~v~fL~s~~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          419 GQPVDVAELIAYFASPASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             BCHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred             CCHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence            68899999999888643  34564 455543

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.82  E-value=5.6e-21  Score=166.66  Aligned_cols=172  Identities=15%  Similarity=0.129  Sum_probs=124.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC------CEEEEEecCCCc--cc-hhhcCCCCCCCcEEEEEccCCCchHHHHHhcC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY------TSINATVFPGSD--SS-HLFALPGAGDANLRVFEADVLDSGAVSRAVEG   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~------~~V~~~~r~~~~--~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (331)
                      |||+||||+||||++++..|++.|+      .+|+++++.+..  .. ....+...   .+.++ +|+.+.+++.+.+++
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~---~~~~~-~di~~~~~~~~a~~~   80 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC---AFPLL-AGLEATDDPKVAFKD   80 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT---TCTTE-EEEEEESCHHHHTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc---ccccc-CCeEeccChHHHhCC
Confidence            5899999999999999999999885      278888775310  00 01111000   11223 577776778888999


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CC-EEEEeCccceeccCCCCCCcccc-CCC-CCChhh
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR-RVVVTSSISAIVPNPGWKGKVFD-ETS-WTDLEY  156 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~SS~~~~~~~~~~~~~~~~-E~~-~~~~~~  156 (331)
                      +|+|||+|+.....  ..++.+.++.|+.++.++++++++.+ .+ +++++|+.....       .++. |.. ...|. 
T Consensus        81 ~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~-------~~~~~~~~~~~~p~-  150 (327)
T 1y7t_A           81 ADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN-------ALIAYKNAPGLNPR-  150 (327)
T ss_dssp             CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH-------HHHHHHTCTTSCGG-
T ss_pred             CCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh-------HHHHHHHcCCCChh-
Confidence            99999999976532  34567899999999999999999885 65 788877642111       1222 222 12222 


Q ss_pred             hhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCC
Q 020110          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (331)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~  200 (331)
                           +.|+.+|+.+|++...+++..|++.+++|+++||||+..
T Consensus       151 -----~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          151 -----NFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             -----GEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             -----heeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence                 479999999999999999889999999999999999753

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.80  E-value=4.8e-18  Score=146.38  Aligned_cols=222  Identities=14%  Similarity=0.099  Sum_probs=144.5

Q ss_pred             CCCeEEEeCcc--hHHHHHHHHHHHHCCCCEEEEEecCC-----------CccchhhcCCCCC-CCcEEEEEcc------
Q 020110            8 EEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPG-----------SDSSHLFALPGAG-DANLRVFEAD------   67 (331)
Q Consensus         8 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~~~r~~-----------~~~~~~~~~~~~~-~~~~~~~~~D------   67 (331)
                      ++|++|||||+  |+||++++++|+++|+ +|++++|++           .......++.... ......+.+|      
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP   85 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccch
Confidence            45799999999  9999999999999999 999987542           1111222221100 0012334443      


Q ss_pred             --CC----C--------chHHHHHhc-------CccEEEEcccCCC--C----CCCCCchhhhhHHHHHHHHHHHHHHHh
Q 020110           68 --VL----D--------SGAVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAAKR  120 (331)
Q Consensus        68 --l~----~--------~~~~~~~~~-------~~d~vih~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~  120 (331)
                        +.    |        ++++.++++       ++|++||+||...  .    +...+++...+++|+.++.++++++..
T Consensus        86 ~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  165 (297)
T 1d7o_A           86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP  165 (297)
T ss_dssp             GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence              22    1        445554443       6899999998532  1    122344577899999999999999876


Q ss_pred             C--CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH----cCCeEEEEcCCcc
Q 020110          121 F--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATC  194 (331)
Q Consensus       121 ~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~v  194 (331)
                      .  .-.++|++||..+..+.+..                   ...|+.+|...+.+.+.++.+    +|+++++++||.+
T Consensus       166 ~m~~~g~iv~isS~~~~~~~~~~-------------------~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v  226 (297)
T 1d7o_A          166 IMNPGGASISLTYIASERIIPGY-------------------GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPL  226 (297)
T ss_dssp             GEEEEEEEEEEECGGGTSCCTTC-------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HhccCceEEEEeccccccCCCCc-------------------chHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEecccc
Confidence            4  12589999997554432221                   027999999999999888754    5899999999999


Q ss_pred             cCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          195 LGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       195 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      .++..... .........+....+      ...+..++|+|+++++++...  ...|. +++.++
T Consensus       227 ~T~~~~~~-~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG  284 (297)
T 1d7o_A          227 GSRAAKAI-GFIDTMIEYSYNNAP------IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             BCCCSSCC-SHHHHHHHHHHHHSS------SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ccchhhhc-cccHHHHHHhhccCC------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            99875431 112222222222221      134678999999999888643  23564 555544

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.80  E-value=4.4e-19  Score=161.72  Aligned_cols=204  Identities=18%  Similarity=0.145  Sum_probs=150.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh----cCCCCCCCcEEEEEccCCCchHHHHHhcC-----
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF----ALPGAGDANLRVFEADVLDSGAVSRAVEG-----   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----   80 (331)
                      +++|||||+|.||.+++++|.++|+..|+++.|+........    ++.. .+.++.++.+|++|.+++.++++.     
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQ-LGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            799999999999999999999999757888888643322111    1111 122799999999999999988853     


Q ss_pred             -ccEEEEcccCC-CCC----CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           81 -CKGVFHVASPC-TLE----DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        81 -~d~vih~a~~~-~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                       +|+|||+||.. ...    ...+.....+++|+.++.++.+++...+.++||++||..++++.++.             
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~-------------  385 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQ-------------  385 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTC-------------
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCc-------------
Confidence             79999999976 221    12233477899999999999999998888999999998887765543             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  234 (331)
                             ..|+.+|...+.+.+.+. ..|++++++.||.+.+++.....    .....+..        .....+..++.
T Consensus       386 -------~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~----~~~~~l~~--------~g~~~l~pe~~  445 (496)
T 3mje_A          386 -------PGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDP----EVHDRLVR--------QGVLAMEPEHA  445 (496)
T ss_dssp             -------HHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC----------CHHHHH--------TTEEEECHHHH
T ss_pred             -------HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccCh----HHHHHHHh--------cCCCCCCHHHH
Confidence                   379999999998887654 67999999999988776532110    01111111        12345788999


Q ss_pred             HHHHHHhhcCCCC
Q 020110          235 AKAQVLLFESPAA  247 (331)
Q Consensus       235 a~a~~~~l~~~~~  247 (331)
                      ++++..++..+..
T Consensus       446 ~~~l~~~l~~~~~  458 (496)
T 3mje_A          446 LGALDQMLENDDT  458 (496)
T ss_dssp             HHHHHHHHHHTCS
T ss_pred             HHHHHHHHcCCCc
Confidence            9999999986643

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.77  E-value=3.6e-18  Score=157.40  Aligned_cols=224  Identities=18%  Similarity=0.173  Sum_probs=155.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEE-ecCCCc-------------cchh-hcCCCCCCCcEEEEEccCCCch
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSD-------------SSHL-FALPGAGDANLRVFEADVLDSG   72 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~-------------~~~~-~~~~~~~~~~~~~~~~Dl~~~~   72 (331)
                      +.+++|||||+|.||.+++++|.++|+..|+.+ .|+...             ...+ .++... +.++.++.+|++|.+
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL-GATATVVTCDLTDAE  328 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH-TCEEEEEECCTTSHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc-CCEEEEEECCCCCHH
Confidence            357999999999999999999999998336666 777432             1111 111111 227999999999999


Q ss_pred             HHHHHhcC------ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHHhCC-----CCEEEEeCccceecc
Q 020110           73 AVSRAVEG------CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRFG-----VRRVVVTSSISAIVP  137 (331)
Q Consensus        73 ~~~~~~~~------~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~v~~SS~~~~~~  137 (331)
                      ++.++++.      +|+|||+||......    ..+.....+++|+.++.+|.+++....     .++||++||..++.+
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g  408 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG  408 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence            99988864      699999999765422    223346789999999999999998775     789999999877766


Q ss_pred             CCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCC
Q 020110          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS  217 (331)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  217 (331)
                      .++.                    ..|+.+|...+.+...+. ..|++++++.||.+-++....  ...   ...+..  
T Consensus       409 ~~g~--------------------~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~~tgm~~~--~~~---~~~~~~--  460 (525)
T 3qp9_A          409 GAGQ--------------------GAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPWEGSRVTE--GAT---GERLRR--  460 (525)
T ss_dssp             CTTC--------------------HHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCBTTSGGGS--SHH---HHHHHH--
T ss_pred             CCCC--------------------HHHHHHHHHHHHHHHHHH-hCCCCEEEEECCccccccccc--hhh---HHHHHh--
Confidence            5543                    379999999988765443 468999999999883322111  111   111111  


Q ss_pred             CCccCcCCCCceeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHh
Q 020110          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKL  270 (331)
Q Consensus       218 ~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~  270 (331)
                            .....+..+++++++..++..+...  ..+  ..+.|..+...+...
T Consensus       461 ------~g~~~l~pee~a~~l~~~l~~~~~~--v~v--~~~dw~~~~~~~~~~  503 (525)
T 3qp9_A          461 ------LGLRPLAPATALTALDTALGHGDTA--VTI--ADVDWSSFAPGFTTA  503 (525)
T ss_dssp             ------TTBCCBCHHHHHHHHHHHHHHTCSE--EEE--CCBCHHHHHHHHHSS
T ss_pred             ------cCCCCCCHHHHHHHHHHHHhCCCCe--EEE--EeCCHHHHHhhcccc
Confidence                  1235688999999999999765321  122  235566666655543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.74  E-value=8.7e-17  Score=139.61  Aligned_cols=223  Identities=17%  Similarity=0.100  Sum_probs=140.0

Q ss_pred             CCCeEEEeCc--chHHHHHHHHHHHHCCCCEEEEEecCC-----------CccchhhcCCCCCC-CcEEEEEccC-----
Q 020110            8 EEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPG-----------SDSSHLFALPGAGD-ANLRVFEADV-----   68 (331)
Q Consensus         8 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~-----------~~~~~~~~~~~~~~-~~~~~~~~Dl-----   68 (331)
                      ++|++|||||  +|+||++++++|+++|+ +|++++|++           .......++..... ..+.++.+|+     
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~   86 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGA-RVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP   86 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTC-EEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCC-EEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence            4579999999  89999999999999999 999987642           11111222211000 0123444443     


Q ss_pred             -------CC--------chHHHHHhc-------CccEEEEcccCCC--C----CCCCCchhhhhHHHHHHHHHHHHHHHh
Q 020110           69 -------LD--------SGAVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAAKR  120 (331)
Q Consensus        69 -------~~--------~~~~~~~~~-------~~d~vih~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~  120 (331)
                             +|        ++++.++++       ++|++||+||...  .    +...+++...+++|+.++.++++++..
T Consensus        87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  166 (315)
T 2o2s_A           87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP  166 (315)
T ss_dssp             TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred             chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence                   22        445555443       6899999999642  1    122334577899999999999999865


Q ss_pred             C--CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH----cCCeEEEEcCCcc
Q 020110          121 F--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATC  194 (331)
Q Consensus       121 ~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~v  194 (331)
                      .  .-.++|++||..+..+.+..                   ...|+.+|...+.+.+.++.+    +|+++++++||.+
T Consensus       167 ~m~~~g~Iv~isS~~~~~~~~~~-------------------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v  227 (315)
T 2o2s_A          167 IMNEGGSAVTLSYLAAERVVPGY-------------------GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPL  227 (315)
T ss_dssp             TEEEEEEEEEEEEGGGTSCCTTC-------------------CTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCC
T ss_pred             HHhcCCEEEEEecccccccCCCc-------------------cHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccc
Confidence            4  12589999997554332211                   026999999999999887654    5899999999999


Q ss_pred             cCCCCCC-----CCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCceE-EEecc
Q 020110          195 LGPLMQP-----YLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRY-LCTNG  256 (331)
Q Consensus       195 ~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~~  256 (331)
                      .++....     ...........+....+      ...+..++|+|+++++++...  ...|.+ .+.++
T Consensus       228 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  291 (315)
T 2o2s_A          228 KSRAASAIGKSGEKSFIDYAIDYSYNNAP------LRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG  291 (315)
T ss_dssp             CCHHHHHTTCSSSSCHHHHHHHHHHHHSS------SCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cchhhhhccccccchhHHHHHHHHhccCC------CCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCC
Confidence            7753110     00011111111111111      123578999999999988643  345654 44443

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.73  E-value=3.4e-17  Score=142.50  Aligned_cols=227  Identities=14%  Similarity=0.089  Sum_probs=122.1

Q ss_pred             CCCeEEEeCc--chHHHHHHHHHHHHCCCCEEEEEecCC-----------Cccchh------------hcCCCCCC--Cc
Q 020110            8 EEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPG-----------SDSSHL------------FALPGAGD--AN   60 (331)
Q Consensus         8 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~-----------~~~~~~------------~~~~~~~~--~~   60 (331)
                      +.|++|||||  +|+||++++++|+++|+ +|++++|++           ......            .++.....  ..
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGA-RVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF   86 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTC-EEEEEECHHHHHHHHC--------------------------------CC
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence            4578999999  89999999999999999 999987642           110100            00000000  00


Q ss_pred             EEEEEccC------------CC--------chHHHHHhc-------CccEEEEcccCCC--C----CCCCCchhhhhHHH
Q 020110           61 LRVFEADV------------LD--------SGAVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILPA  107 (331)
Q Consensus        61 ~~~~~~Dl------------~~--------~~~~~~~~~-------~~d~vih~a~~~~--~----~~~~~~~~~~~~~n  107 (331)
                      ..++.+|+            ++        ++++.++++       ++|++||+||...  .    +...+++...+++|
T Consensus        87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN  166 (319)
T 2ptg_A           87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS  166 (319)
T ss_dssp             SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence            24444442            22        234554443       6899999998642  1    12233457789999


Q ss_pred             HHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH----
Q 020110          108 VQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----  181 (331)
Q Consensus       108 ~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----  181 (331)
                      +.++.++++++...  .-.++|++||..+..+.+..                   ...|+.+|...+.+.+.++.+    
T Consensus       167 ~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~-------------------~~~Y~asKaal~~l~~~la~el~~~  227 (319)
T 2ptg_A          167 SYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGY-------------------GGGMSSAKAALESDCRTLAFEAGRA  227 (319)
T ss_dssp             THHHHHHHHHHGGGEEEEEEEEEEEECC-------------------------------------THHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCceEEEEeccccccccCcc-------------------chhhHHHHHHHHHHHHHHHHHhccc
Confidence            99999999998764  12589999997554332211                   026999999999888877654    


Q ss_pred             cCCeEEEEcCCcccCCCCCCCCC-hhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCceE-EEecc
Q 020110          182 HGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRY-LCTNG  256 (331)
Q Consensus       182 ~~~~~~~lR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~~  256 (331)
                      +|+++++++||.+.++....... ....+.......  .........+..++|+|+++++++...  ...|.+ .+.++
T Consensus       228 ~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  304 (319)
T 2ptg_A          228 RAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDY--SEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNG  304 (319)
T ss_dssp             HCCEEEEEEECCCC---------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCeeEEEEeeCCccChhhhhcccccchhhHHHHHHH--HhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            58999999999998875321100 000000000000  000001223578999999999988643  345644 45443

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.72  E-value=3.6e-17  Score=153.85  Aligned_cols=205  Identities=17%  Similarity=0.104  Sum_probs=137.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEec---------CCCccchhhc-CCCCCCCcEEEEEccCCCchHHHH
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF---------PGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSR   76 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r---------~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~   76 (331)
                      .+.|++|||||+|.||++++++|+++|+ +|++++|         +......... +..... .   ..+|+++.+++.+
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~---~~~D~~d~~~~~~   91 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-E---AVADYNSVIDGAK   91 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTC-C---EEECCCCGGGHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-e---EEEEeCCHHHHHH
Confidence            3467999999999999999999999999 9999877         2222222111 111111 2   3489999988887


Q ss_pred             Hhc-------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCC
Q 020110           77 AVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGW  141 (331)
Q Consensus        77 ~~~-------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~  141 (331)
                      +++       .+|++||+||.....    ...+++...+++|+.++.++++++    ++.+..++|++||..+.++.++.
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~  171 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQ  171 (613)
T ss_dssp             HHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCC
Confidence            775       479999999976542    223445778999999999999987    45566799999998776654432


Q ss_pred             CCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCC
Q 020110          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (331)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (331)
                                          ..|+.+|...+.+.+.++.+.   |+++.++.|+.+ .+.......              
T Consensus       172 --------------------~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~--------------  216 (613)
T 3oml_A          172 --------------------VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILP--------------  216 (613)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC--------------
T ss_pred             --------------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccc--------------
Confidence                                379999999999998887654   899999999853 221111100              


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCCC-CCce-EEEec
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA-ASGR-YLCTN  255 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~~-~~g~-~~~~~  255 (331)
                          ......+..+|+|.++++++.... ..|. +.+.+
T Consensus       217 ----~~~~~~~~pedvA~~v~~L~s~~~~~tG~~i~vdG  251 (613)
T 3oml_A          217 ----DILFNELKPKLIAPVVAYLCHESCEDNGSYIESAA  251 (613)
T ss_dssp             ----HHHHTTCCGGGTHHHHHHTTSTTCCCCSCEEEEET
T ss_pred             ----hhhhhcCCHHHHHHHHHHhcCCCcCCCceEEEECC
Confidence                011234578999999998887652 3453 44443

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.72  E-value=2.7e-16  Score=137.31  Aligned_cols=169  Identities=10%  Similarity=0.061  Sum_probs=120.6

Q ss_pred             CCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCC---------C---ccchhhcCCCCCCCcEEEEEccCCCc--h
Q 020110            9 EETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPG---------S---DSSHLFALPGAGDANLRVFEADVLDS--G   72 (331)
Q Consensus         9 ~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~---------~---~~~~~~~~~~~~~~~~~~~~~Dl~~~--~   72 (331)
                      .|++|||||++  .||.+++++|+++|+ +|++..|++         .   ...............+.++.+|+++.  +
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~-~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            57899999875  999999999999999 999776543         1   11111111111111478888999887  6


Q ss_pred             ------------------HHHHHhc-------CccEEEEcccCCC--C----CCCCCchhhhhHHHHHHHHHHHHHHHhC
Q 020110           73 ------------------AVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAAKRF  121 (331)
Q Consensus        73 ------------------~~~~~~~-------~~d~vih~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~  121 (331)
                                        ++.++++       .+|++||+||...  .    ....+.+...+++|+.++..+.+++...
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              6665553       5799999999632  1    1223445788999999999999988655


Q ss_pred             C--CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc-chhHHHHHHHHHHHHHHHH----cCCeEEEEcCCcc
Q 020110          122 G--VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK-WYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATC  194 (331)
Q Consensus       122 ~--~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~v  194 (331)
                      -  -.++|++||..+..+.+..                    . .|+.+|...+.+.+.++.+    +|+++.++.||.|
T Consensus       161 m~~~g~Iv~isS~~~~~~~~~~--------------------~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v  220 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVVPGY--------------------GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL  220 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTC--------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HhhCCeEEEEeCccccCCCCcc--------------------hHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEeccee
Confidence            1  1589999997654433221                    2 7999999999888877644    5899999999999


Q ss_pred             cCCC
Q 020110          195 LGPL  198 (331)
Q Consensus       195 ~G~~  198 (331)
                      ..+.
T Consensus       221 ~T~~  224 (329)
T 3lt0_A          221 KSRA  224 (329)
T ss_dssp             CCHH
T ss_pred             echh
Confidence            8764

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.62  E-value=9.7e-15  Score=148.15  Aligned_cols=204  Identities=16%  Similarity=0.121  Sum_probs=138.4

Q ss_pred             cCCCeEEEeCcchH-HHHHHHHHHHHCCCCEEEEEe-cCCCccchh-hcC---CCCCCCcEEEEEccCCCchHHHHHhc-
Q 020110            7 KEEETVCVTGANGF-IGTWLVKTLLDNNYTSINATV-FPGSDSSHL-FAL---PGAGDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~-iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~-~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      .++|++|||||+|. ||.++++.|++.|+ +|++++ |+....... .++   ....+.++.++.+|++|.+++.++++ 
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA-~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGA-KVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            34578999999999 99999999999999 999884 554332211 111   11112278899999999998887663 


Q ss_pred             ------------CccEEEEcccCCCCC-C----C--CCchhhhhHHHHHHHHHHHHHHHhCC------CCEEEEeCccce
Q 020110           80 ------------GCKGVFHVASPCTLE-D----P--VDPEKELILPAVQGTLNVLEAAKRFG------VRRVVVTSSISA  134 (331)
Q Consensus        80 ------------~~d~vih~a~~~~~~-~----~--~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~v~~SS~~~  134 (331)
                                  .+|++||+||..... .    .  .+.....+++|+.++.+++++++...      ..+||++||..+
T Consensus       752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag  831 (1887)
T 2uv8_A          752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  831 (1887)
T ss_dssp             HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence                        489999999975432 1    1  23357789999999999999874331      248999999755


Q ss_pred             eccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHH-HHHHHHHcC--CeEEEEcCCcccC-CCCCCCCChhHHHH
Q 020110          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA-AWEFAEKHG--VDVVAIHPATCLG-PLMQPYLNASCAVL  210 (331)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~~~~~--~~~~~lR~~~v~G-~~~~~~~~~~~~~~  210 (331)
                      ..+  +.                    ..|+.+|...+.+ .+.++++.+  ++++.+.||.+.| +..... .....  
T Consensus       832 ~~g--g~--------------------~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~-~~~~~--  886 (1887)
T 2uv8_A          832 TFG--GD--------------------GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NIIAE--  886 (1887)
T ss_dssp             CSS--CB--------------------TTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C-CTTHH--
T ss_pred             ccC--CC--------------------chHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc-hhHHH--
Confidence            433  11                    2799999999988 555554433  9999999999984 322110 11111  


Q ss_pred             HHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          211 QQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                        .....       ...+...+|+|.+++.++...
T Consensus       887 --~~~~~-------plr~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          887 --GIEKM-------GVRTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             --HHHTT-------SCCCEEHHHHHHHHHGGGSHH
T ss_pred             --HHHhc-------CCCCCCHHHHHHHHHHHhCCC
Confidence              11111       113458999999999888654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.59  E-value=3.8e-14  Score=132.80  Aligned_cols=207  Identities=17%  Similarity=0.111  Sum_probs=137.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccC-CCchHHH-HH---hcCc
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV-LDSGAVS-RA---VEGC   81 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~-~~---~~~~   81 (331)
                      .++|.+|||||++.||+.+++.|.++|+ +|++.+|+..+ ....++...++ ++..+.+|+ .+.+.+. ++   +..+
T Consensus       320 l~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~-~~~~~i~~~g~-~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          320 LKDKVVLITGAGAGLGKEYAKWFAKYGA-KVVVNDFKDAT-KTVDEIKAAGG-EAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCeEEEECcchHHHHHHHHHHHHCCC-EEEEEeCccHH-HHHHHHHhcCC-eEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            3457899999999999999999999999 99988764321 11111111112 567778888 5544322 22   3468


Q ss_pred             cEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |++||+||....    +...+++...+++|+.++.++.+++.    +.+-.++|++||..+.++.++.            
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~------------  464 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQ------------  464 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTB------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCC------------
Confidence            999999997543    22334467889999999999888763    3344689999998665544332            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                              ..|+.+|.....+.+.++.+   +|+++..+.|+. -.+....       ..    .       ....+...
T Consensus       465 --------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~-------~~----~-------~~~~~~~~  517 (604)
T 2et6_A          465 --------ANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLS-------IM----R-------EQDKNLYH  517 (604)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---------------------------CCSSC
T ss_pred             --------hhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccc-------cC----c-------hhhccCCC
Confidence                    26999999999988887755   589999999983 2222110       00    0       00123457


Q ss_pred             HHHHHHHHHHhhcCCC-CCc-eEEEec
Q 020110          231 VKDVAKAQVLLFESPA-ASG-RYLCTN  255 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~-~~g-~~~~~~  255 (331)
                      .+|+|.++.+++.... ..| .+.+.+
T Consensus       518 pe~vA~~v~~L~s~~~~itG~~~~vdG  544 (604)
T 2et6_A          518 ADQVAPLLVYLGTDDVPVTGETFEIGG  544 (604)
T ss_dssp             GGGTHHHHHHTTSTTCCCCSCEEEEET
T ss_pred             HHHHHHHHHHHhCCccCCCCcEEEECC
Confidence            8999999998886543 355 344433

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.59  E-value=4.6e-15  Score=146.11  Aligned_cols=204  Identities=15%  Similarity=0.085  Sum_probs=136.4

Q ss_pred             CCCeEEEeCcchH-HHHHHHHHHHHCCCCEEEEE-ecCCCccch-hhcCCC---CCCCcEEEEEccCCCchHHHHHhc--
Q 020110            8 EEETVCVTGANGF-IGTWLVKTLLDNNYTSINAT-VFPGSDSSH-LFALPG---AGDANLRVFEADVLDSGAVSRAVE--   79 (331)
Q Consensus         8 ~~~~vlVtGatG~-iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~-~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~--   79 (331)
                      ++|++|||||+|. ||.++++.|++.|+ +|+++ .|+...... ..++..   ..+.++.++.+|++|.+++.++++  
T Consensus       475 ~GKvALVTGASgGGIGrAIAr~LA~~GA-~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I  553 (1688)
T 2pff_A          475 KDKYVLITGAGKGSIGAEVLQGLLQGGA-KVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  553 (1688)
T ss_dssp             CSCCEEECSCSSSSTHHHHHHHHHHHTC-EEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHHCcC-EEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            4578999999998 99999999999999 99988 455443322 222211   112278899999999998887763  


Q ss_pred             -----------CccEEEEcccCCCCC-CC------CCchhhhhHHHHHHHHHHHHHHHh--C----CCCEEEEeCcccee
Q 020110           80 -----------GCKGVFHVASPCTLE-DP------VDPEKELILPAVQGTLNVLEAAKR--F----GVRRVVVTSSISAI  135 (331)
Q Consensus        80 -----------~~d~vih~a~~~~~~-~~------~~~~~~~~~~n~~~~~~l~~~~~~--~----~~~~~v~~SS~~~~  135 (331)
                                 .+|++||+||..... ..      .+.....+++|+.++.+++++++.  .    +..+||++||..+.
T Consensus       554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~  633 (1688)
T 2pff_A          554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT  633 (1688)
T ss_dssp             HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc
Confidence                       489999999975432 11      233477899999999999998732  2    12479999997554


Q ss_pred             ccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHH-HHHHHHHcC--CeEEEEcCCcccCCCCCCCCChhHHHHHH
Q 020110          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA-AWEFAEKHG--VDVVAIHPATCLGPLMQPYLNASCAVLQQ  212 (331)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~~~~~--~~~~~lR~~~v~G~~~~~~~~~~~~~~~~  212 (331)
                      .+  +.                    ..|+.+|...+.+ .+.++++.+  ++++.+.||.+.|..........      
T Consensus       634 ~G--g~--------------------saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~------  685 (1688)
T 2pff_A          634 FG--GD--------------------GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNII------  685 (1688)
T ss_dssp             SS--CB--------------------TTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTC------
T ss_pred             cC--Cc--------------------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHH------
Confidence            32  10                    2799999999988 343333222  88889999998853211100000      


Q ss_pred             HHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          213 LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                         ...  ...........+|+|++++.++...
T Consensus       686 ---~~~--l~~iplR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          686 ---AEG--IEKMGVRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             ---STT--TSSSSCCCCCCCTTHHHHHHHTSTT
T ss_pred             ---HHH--HHhCCCCCCCHHHHHHHHHHHhCCC
Confidence               000  0001113347899999999988655

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.57  E-value=5.2e-14  Score=142.61  Aligned_cols=202  Identities=13%  Similarity=0.063  Sum_probs=137.4

Q ss_pred             CCCeEEEeCcchH-HHHHHHHHHHHCCCCEEEEEe-cCCCccch----h-hcCCCCCCCcEEEEEccCCCchHHHHHhc-
Q 020110            8 EEETVCVTGANGF-IGTWLVKTLLDNNYTSINATV-FPGSDSSH----L-FALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         8 ~~~~vlVtGatG~-iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~----~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      ++|++|||||+|. ||.+++++|++.|+ +|++++ |+......    + .++... +.++.++.+|++|.+++.++++ 
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA-~VVl~~~R~~~~l~~~a~eL~~el~~~-G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGGA-KVIVTTSRFSRQVTEYYQGIYARCGAR-GSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHHHHHHCCT-TCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCChHHHHHHHHHHHHHhhcc-CCeEEEEEcCCCCHHHHHHHHHH
Confidence            4578999999999 99999999999999 999885 44332211    1 111111 2278899999999998887763 


Q ss_pred             ----------CccEEEEcccCCCCC-CC------CCchhhhhHHHHHHHHHHHHHHHh--C----CCCEEEEeCccceec
Q 020110           80 ----------GCKGVFHVASPCTLE-DP------VDPEKELILPAVQGTLNVLEAAKR--F----GVRRVVVTSSISAIV  136 (331)
Q Consensus        80 ----------~~d~vih~a~~~~~~-~~------~~~~~~~~~~n~~~~~~l~~~~~~--~----~~~~~v~~SS~~~~~  136 (331)
                                .+|+|||+||..... ..      .+.....+++|+.++.+++++++.  .    +..+||++||..+..
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~  808 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF  808 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence                      489999999975432 11      133578899999999988876321  1    225899999975544


Q ss_pred             cCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH-c--CCeEEEEcCCccc-CCCCCCCCChhHHHHHH
Q 020110          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-H--GVDVVAIHPATCL-GPLMQPYLNASCAVLQQ  212 (331)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~--~~~~~~lR~~~v~-G~~~~~~~~~~~~~~~~  212 (331)
                      +.  .                    ..|+.+|...+.+...+..+ .  +++++.+.||.+- ++....     ......
T Consensus       809 gg--~--------------------~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~-----~~~~~~  861 (1878)
T 2uv9_A          809 GN--D--------------------GLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA-----NNLVAE  861 (1878)
T ss_dssp             SC--C--------------------SSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH-----HHHTHH
T ss_pred             CC--c--------------------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc-----chhhHH
Confidence            31  1                    27999999999887655433 1  3999999999987 443211     111111


Q ss_pred             HHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          213 LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      .....       .......+|+|.+++.++...
T Consensus       862 ~~~~~-------plr~~sPeEVA~avlfLaSd~  887 (1878)
T 2uv9_A          862 GVEKL-------GVRTFSQQEMAFNLLGLMAPA  887 (1878)
T ss_dssp             HHHTT-------TCCCBCHHHHHHHHHHHHSHH
T ss_pred             HHHhc-------CCCCCCHHHHHHHHHHHhCCc
Confidence            11111       113348999999999887643

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.57  E-value=5.1e-15  Score=142.83  Aligned_cols=205  Identities=19%  Similarity=0.198  Sum_probs=146.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHH-HCCCCEEEEEecCCCccchh----hcCCCCCCCcEEEEEccCCCchHHHHHhcC---
Q 020110            9 EETVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVEG---   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~-~~g~~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---   80 (331)
                      .+++|||||+|.||+.++++|. +.|..+|+.++|+.......    .++... +.++.++.+|++|.+++.++++.   
T Consensus       530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY-GAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            5789999999999999999999 78974688888874332221    111111 22799999999999999988853   


Q ss_pred             ---ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           81 ---CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        81 ---~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                         +|+|||+|+.....    ...+++...+++|+.|+.++.+++.. .. +||++||..+..+.++.            
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~g~------------  674 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSGGQ------------  674 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCSSC------------
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCCCC------------
Confidence               69999999976532    22344577899999999999998833 33 89999999887776654            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHH
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  233 (331)
                              ..|+.+|...+.+.+++. ..|++++.+-||.+-+++....  ........+..        .....+..++
T Consensus       675 --------~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~~~~--~~~~~~~~~~~--------~g~~~l~~~e  735 (795)
T 3slk_A          675 --------GNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHGMAST--LREAEQDRLAR--------SGLLPISTEE  735 (795)
T ss_dssp             --------HHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCCHHHH--HHHHHHHHHHH--------TTBCCCCHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcchhhcc--ccHHHHHHHHh--------cCCCCCCHHH
Confidence                    379999988887776655 6799999999998865532100  00011111111        1234577889


Q ss_pred             HHHHHHHhhcCCCC
Q 020110          234 VAKAQVLLFESPAA  247 (331)
Q Consensus       234 ~a~a~~~~l~~~~~  247 (331)
                      ....+..++..+..
T Consensus       736 ~~~~~~~~l~~~~~  749 (795)
T 3slk_A          736 GLSQFDAACGGAHT  749 (795)
T ss_dssp             HHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHhCCCc
Confidence            99998888876543

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.53  E-value=1.9e-13  Score=119.52  Aligned_cols=171  Identities=11%  Similarity=0.016  Sum_probs=119.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHH-CCCCEEEEEecCCCccch------------hh-cCCCCCCCcEEEEEccCCCchH
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSH------------LF-ALPGAGDANLRVFEADVLDSGA   73 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~------------~~-~~~~~~~~~~~~~~~Dl~~~~~   73 (331)
                      ..|++|||||++.||.++++.|.+ .|. +|++++|+......            .. .....+. .+..+.+|++++++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~-~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGL-YAKSINGDAFSDEI  123 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTC-CEEEEESCTTSHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCC-ceEEEECCCCCHHH
Confidence            467899999999999999999999 999 99988886543211            11 1111122 68889999999988


Q ss_pred             HHHHhc-------CccEEEEcccCCC-------------C-------------------------CCCCCchhhhhHHHH
Q 020110           74 VSRAVE-------GCKGVFHVASPCT-------------L-------------------------EDPVDPEKELILPAV  108 (331)
Q Consensus        74 ~~~~~~-------~~d~vih~a~~~~-------------~-------------------------~~~~~~~~~~~~~n~  108 (331)
                      +.++++       ++|++||+||...             .                         ....+++...+++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            877764       4799999998641             0                         112233466677787


Q ss_pred             HHHH-HHHHHHHhCC----CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH--
Q 020110          109 QGTL-NVLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK--  181 (331)
Q Consensus       109 ~~~~-~l~~~~~~~~----~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~--  181 (331)
                      .+.. .+++++....    -.++|++||.....+.+..                  ....|+.+|...+.+.+.++.+  
T Consensus       204 ~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~------------------~~~aY~AaKaal~~ltrsLA~Ela  265 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIY------------------WNGSIGAAKKDLDQKVLAIRESLA  265 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTT------------------TTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCc------------------cchHHHHHHHHHHHHHHHHHHHhC
Confidence            7665 5555543211    2479999997554332211                  0137999999999988887754  


Q ss_pred             -c-CCeEEEEcCCcccCCC
Q 020110          182 -H-GVDVVAIHPATCLGPL  198 (331)
Q Consensus       182 -~-~~~~~~lR~~~v~G~~  198 (331)
                       + |+++.++-|+.+-.+.
T Consensus       266 ~~~GIRVNaVaPG~i~T~~  284 (405)
T 3zu3_A          266 AHGGGDARVSVLKAVVSQA  284 (405)
T ss_dssp             TTTSCEEEEEECCCCCCHH
T ss_pred             cccCeEEEEEEeCCCcCch
Confidence             4 8999999999988764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.48  E-value=1.6e-13  Score=128.59  Aligned_cols=195  Identities=18%  Similarity=0.118  Sum_probs=129.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC---------Cccchh-hcCCCCCCCcEEEEEccCCCchHHHH
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---------SDSSHL-FALPGAGDANLRVFEADVLDSGAVSR   76 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~---------~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~   76 (331)
                      .++|.++||||++.||+++++.|.++|+ +|++.+|+.         ...... .++...++ .+   .+|+.|.+++++
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~-~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG-VA---VADYNNVLDGDK   80 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTC-EE---EEECCCTTCHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCC-eE---EEEcCCHHHHHH
Confidence            3457899999999999999999999999 999887754         111111 11111111 22   357766644433


Q ss_pred             Hh-------cCccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCC
Q 020110           77 AV-------EGCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGW  141 (331)
Q Consensus        77 ~~-------~~~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~  141 (331)
                      ++       ..+|++||+||....    +...++++..+++|+.++..+.+++.    +.+-.++|++||..+.++.++.
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~  160 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQ  160 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCc
Confidence            33       358999999997542    22334467889999999999888763    3345689999998776654432


Q ss_pred             CCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCC
Q 020110          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (331)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (331)
                                          ..|+.+|.....+.+.++.+   +|+++..+.|+ +..+.           ..    .. 
T Consensus       161 --------------------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m-----------~~----~~-  203 (604)
T 2et6_A          161 --------------------ANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRM-----------TE----SI-  203 (604)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHH-----------HH----TT-
T ss_pred             --------------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCcc-----------cc----cc-
Confidence                                26999999999988888755   48999999996 21110           00    00 


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      .  +.........+|+|.++++++...
T Consensus       204 ~--~~~~~~~~~pe~vA~~v~~L~s~~  228 (604)
T 2et6_A          204 M--PPPMLEKLGPEKVAPLVLYLSSAE  228 (604)
T ss_dssp             S--CHHHHTTCSHHHHHHHHHHHTSSS
T ss_pred             C--ChhhhccCCHHHHHHHHHHHhCCc
Confidence            0  000112357899999999888654

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.48  E-value=1.6e-13  Score=121.02  Aligned_cols=172  Identities=15%  Similarity=0.064  Sum_probs=117.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHH-CCCCEEEEEecCCCccch------------h-hcCCCCCCCcEEEEEccCCCchH
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSH------------L-FALPGAGDANLRVFEADVLDSGA   73 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~------------~-~~~~~~~~~~~~~~~~Dl~~~~~   73 (331)
                      ..|++|||||++.||.++++.|.+ .|. +|+++.|+......            . ......+. .+..+.+|++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~-~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGL-YSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTC-CEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCC-cEEEEEecCCCHHH
Confidence            357899999999999999999999 999 99999887544321            1 11111122 78899999999987


Q ss_pred             HHHHh--------cCccEEEEcccCC-------------CCC-------------------------CCCCchhhhhHHH
Q 020110           74 VSRAV--------EGCKGVFHVASPC-------------TLE-------------------------DPVDPEKELILPA  107 (331)
Q Consensus        74 ~~~~~--------~~~d~vih~a~~~-------------~~~-------------------------~~~~~~~~~~~~n  107 (331)
                      +.+++        .++|++||+||..             ...                         ...+++...+++|
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn  217 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM  217 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence            76655        3479999999862             100                         1112234556666


Q ss_pred             HHHHH-HHHHHHHhCC----CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH-
Q 020110          108 VQGTL-NVLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-  181 (331)
Q Consensus       108 ~~~~~-~l~~~~~~~~----~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-  181 (331)
                      ..+.. .+++++....    -.++|++||..+..+.+.               +   ....|+.+|...+.+.+.++.+ 
T Consensus       218 ~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~---------------~---~~~aY~ASKaAl~~lTrsLA~El  279 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI---------------Y---WHGALGKAKVDLDRTAQRLNARL  279 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH---------------H---TSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC---------------c---cchHHHHHHHHHHHHHHHHHHHh
Confidence            55554 5566554322    247999999754322111               0   1137999999999988887755 


Q ss_pred             --cCCeEEEEcCCcccCCCC
Q 020110          182 --HGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       182 --~~~~~~~lR~~~v~G~~~  199 (331)
                        +|+++.++-||.+-.+..
T Consensus       280 a~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          280 AKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HTTTCEEEEEEECCCCCTTG
T ss_pred             CccCEEEEEEEcCCCcChhh
Confidence              489999999999988764

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.46  E-value=3.5e-13  Score=119.84  Aligned_cols=212  Identities=10%  Similarity=-0.009  Sum_probs=134.0

Q ss_pred             CCCeEEEeCcchHHHHH--HHHHHHHCCCCEEEEEecCCCcc------------chhhcCCCCCCCcEEEEEccCCCchH
Q 020110            8 EEETVCVTGANGFIGTW--LVKTLLDNNYTSINATVFPGSDS------------SHLFALPGAGDANLRVFEADVLDSGA   73 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~--l~~~L~~~g~~~V~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~Dl~~~~~   73 (331)
                      ..|++|||||++.||.+  +++.|.++|+ +|+++.|+....            ..+.+.....+..+..+.+|+++.++
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            46899999999999999  9999999999 999998865432            11111111112268899999999988


Q ss_pred             HHHHhc-------CccEEEEcccCC-------------CCC-------------------------CCCCchhhhhHHHH
Q 020110           74 VSRAVE-------GCKGVFHVASPC-------------TLE-------------------------DPVDPEKELILPAV  108 (331)
Q Consensus        74 ~~~~~~-------~~d~vih~a~~~-------------~~~-------------------------~~~~~~~~~~~~n~  108 (331)
                      +.++++       .+|++||+||..             ...                         ...++....+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            877664       479999999864             100                         01122344555555


Q ss_pred             HHHH-HHHHHHHhCC----CCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH--
Q 020110          109 QGTL-NVLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK--  181 (331)
Q Consensus       109 ~~~~-~l~~~~~~~~----~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~--  181 (331)
                      .+.. .+++++....    -.++|.+||.....+.+..                  ....|+.+|...+.+.+.++.+  
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~------------------~~~aY~ASKaAL~~ltrsLA~ELa  279 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIY------------------REGTIGIAKKDLEDKAKLINEKLN  279 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTT------------------TTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCcc------------------ccHHHHHHHHHHHHHHHHHHHHhC
Confidence            5444 4555554332    2468999987543322211                  0137999999999888877644  


Q ss_pred             --cCCeEEEEcCCcccCCCCCCCCChhH---HHHHH-HHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCCCceE
Q 020110          182 --HGVDVVAIHPATCLGPLMQPYLNASC---AVLQQ-LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRY  251 (331)
Q Consensus       182 --~~~~~~~lR~~~v~G~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~~  251 (331)
                        +|+++.++-||.+-.+..... ....   ..+.+ +...            -..+|+++++.+++...-.+|.+
T Consensus       280 ~~~GIrVN~V~PG~v~T~~s~~i-p~~p~y~~~~~~~mk~~------------G~~E~v~e~~~~L~sd~~~~g~~  342 (418)
T 4eue_A          280 RVIGGRAFVSVNKALVTKASAYI-PTFPLYAAILYKVMKEK------------NIHENCIMQIERMFSEKIYSNEK  342 (418)
T ss_dssp             HHHSCEEEEEECCCCCCHHHHTS-TTHHHHHHHHHHHHHHT------------TCCCCHHHHHHHHHHHTTSSSSC
T ss_pred             CccCeEEEEEECCcCcChhhhcC-CCCcHHHHHHHHHHhhc------------CChHHHHHHHHHHhhccccCCCc
Confidence              689999999999987643211 1111   11111 1111            11378888888888765444433

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.41  E-value=8.4e-13  Score=97.04  Aligned_cols=95  Identities=23%  Similarity=0.280  Sum_probs=77.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .|++|+|+|+ |++|+++++.|.+.| + +|++++|++.....+...      ++.++.+|+.+.+++.+.++++|+|||
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~d~vi~   75 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNY-SVTVADHDLAALAVLNRM------GVATKQVDAKDEAGLAKALGGFDAVIS   75 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHHTT------TCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhC------CCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence            3579999999 999999999999999 8 999999987655444422      678899999999999999999999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      +++..                  ....+++++.+.+++++.+
T Consensus        76 ~~~~~------------------~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           76 AAPFF------------------LTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             CSCGG------------------GHHHHHHHHHHTTCEEECC
T ss_pred             CCCch------------------hhHHHHHHHHHhCCCEEEe
Confidence            98531                  1347888898888765554

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.30  E-value=1.1e-11  Score=132.06  Aligned_cols=166  Identities=16%  Similarity=0.127  Sum_probs=118.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch----hhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      ..|++|||||+|.||+.+++.|.++|...|++++|+......    ..++... +.++.++.+|++|.+++.++++    
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ-GVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT-TCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC-CCEEEEEecCCCCHHHHHHHHHHHHh
Confidence            357899999999999999999999998348888887644321    1111111 1278889999999988887664    


Q ss_pred             --CccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 --~~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                        .+|+|||+|+....    +...++....+++|+.|+.++.+++...  ...+||++||..+..+.++.          
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~---------- 2031 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQ---------- 2031 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTC----------
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCc----------
Confidence              47999999996532    2344556888999999999998877653  34789999998776654443          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCccc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCL  195 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~  195 (331)
                                ..|+.+|...+.+.+... ..|++...+-.+.+-
T Consensus      2032 ----------~~Y~aaKaal~~l~~~rr-~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2032 ----------ANYGFANSAMERICEKRR-HDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHH-HTTSCCCEEEECCBC
T ss_pred             ----------HHHHHHHHHHHHHHHHHH-HCCCcEEEEEccCcC
Confidence                      379999999998887544 568888888776543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.28  E-value=8.9e-11  Score=125.23  Aligned_cols=228  Identities=15%  Similarity=0.108  Sum_probs=140.9

Q ss_pred             cCCCeEEEeCcchH-HHHHHHHHHHHCCCCEEEEEecCCCc-----cchhhcCCCCCCCcEEEEEccCCCchHHHHHh--
Q 020110            7 KEEETVCVTGANGF-IGTWLVKTLLDNNYTSINATVFPGSD-----SSHLFALPGAGDANLRVFEADVLDSGAVSRAV--   78 (331)
Q Consensus         7 ~~~~~vlVtGatG~-iG~~l~~~L~~~g~~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--   78 (331)
                      .+.|++|||||++. ||.++++.|++.|. +|++.+|+...     ...+.+.....+..+..+.+|+++++++.+++  
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA-~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGA-TVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTC-EEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCC-EEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            35689999999999 99999999999999 99999987654     22222111112226888999999999888764  


Q ss_pred             --c-------CccEEEEcccC----CCC-----CCCCCchhh----hhHHHHHHHHHHHHHHHh----CCCC---EEE-E
Q 020110           79 --E-------GCKGVFHVASP----CTL-----EDPVDPEKE----LILPAVQGTLNVLEAAKR----FGVR---RVV-V  128 (331)
Q Consensus        79 --~-------~~d~vih~a~~----~~~-----~~~~~~~~~----~~~~n~~~~~~l~~~~~~----~~~~---~~v-~  128 (331)
                        +       .+|++|||||.    ...     ....+++..    .+++|+.++..+++++..    .+..   .+| .
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence              2       37999999997    111     111222333    378888888877776543    2221   122 2


Q ss_pred             eCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH--c--CCeEEEEcCCcccCCCCCCCCC
Q 020110          129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK--H--GVDVVAIHPATCLGPLMQPYLN  204 (331)
Q Consensus       129 ~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~--~--~~~~~~lR~~~v~G~~~~~~~~  204 (331)
                      .|+....++  +                    ...|+.||...+.+.+.++.+  .  +++++.+.||.+-+........
T Consensus      2293 ~ss~~g~~g--~--------------------~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~ 2350 (3089)
T 3zen_D         2293 GSPNRGMFG--G--------------------DGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQND 2350 (3089)
T ss_dssp             ECSSTTSCS--S--------------------CSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTT
T ss_pred             CCcccccCC--C--------------------chHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccch
Confidence            222111000  0                    126999999999999998877  2  5889999999987543211111


Q ss_pred             hhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCC---Cc--eE-EEec-c---ccCHHHHHHHHH
Q 020110          205 ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA---SG--RY-LCTN-G---IYQFGDFAERVS  268 (331)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~---~g--~~-~~~~-~---~~s~~e~~~~i~  268 (331)
                      ...    ......       .......+|+|.+++.++.....   .+  ++ .++| -   ...+.++...+.
T Consensus      2351 ~~~----~~~~~~-------~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~ 2413 (3089)
T 3zen_D         2351 AIV----SAVEEA-------GVTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAR 2413 (3089)
T ss_dssp             TTH----HHHGGG-------SCBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHH
T ss_pred             hHH----HHHHhc-------CCCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHH
Confidence            111    111111       11223889999999988764321   22  23 2223 2   257888877654

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.25  E-value=4.7e-12  Score=109.98  Aligned_cols=173  Identities=16%  Similarity=0.099  Sum_probs=114.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC------CEEEEEecC----CCccch-hhcCCCCCCCcEEEEEccCCCchHHHHH
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY------TSINATVFP----GSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRA   77 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~------~~V~~~~r~----~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   77 (331)
                      .+||+||||+||+|++++..|+..|+      .+|.+++++    ...... ...+...   ...+ ..|+....+..+.
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~---~~~~-~~~i~~~~~~~~a   80 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC---AFPL-LAGMTAHADPMTA   80 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT---TCTT-EEEEEEESSHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh---cccc-cCcEEEecCcHHH
Confidence            35899999999999999999998874      278888776    211111 1111110   0001 2355555667788


Q ss_pred             hcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CC-EEEEeCccceeccCCCCCCccccCCCCCChh
Q 020110           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (331)
Q Consensus        78 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~  155 (331)
                      ++++|+|||+|+....  ......+.+..|+..+.++++++.+.+ .+ +||++|....+.-      ....+..+.-| 
T Consensus        81 l~~aD~Vi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t------~~~~~~~~~~p-  151 (329)
T 1b8p_A           81 FKDADVALLVGARPRG--PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNA------YIAMKSAPSLP-  151 (329)
T ss_dssp             TTTCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH------HHHHHTCTTSC-
T ss_pred             hCCCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHH------HHHHHHcCCCC-
Confidence            9999999999996543  233457789999999999999999884 66 7888875311000      00001110001 


Q ss_pred             hhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Q 020110          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (331)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~  198 (331)
                          +...++.+++...++...+++..|++...++...|+|.+
T Consensus       152 ----~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          152 ----AKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             ----GGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             ----HHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence                113688888888888888888888887778877788865

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.18  E-value=7.4e-11  Score=102.18  Aligned_cols=118  Identities=15%  Similarity=0.039  Sum_probs=83.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      ++|||+||||+||+|++++..|+++|  + +|+++++++. ......+..... ...+ .+ +.+..++.++++++|+||
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~-ev~l~Di~~~-~~~~~dL~~~~~-~~~v-~~-~~~t~d~~~al~gaDvVi   81 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVS-VLHLYDVVNA-PGVTADISHMDT-GAVV-RG-FLGQQQLEAALTGMDLII   81 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEE-EEEEEESSSH-HHHHHHHHTSCS-SCEE-EE-EESHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCC-EEEEEeCCCc-HhHHHHhhcccc-cceE-EE-EeCCCCHHHHcCCCCEEE
Confidence            35699999999999999999999998  7 8999887654 111111111000 1111 11 223456778899999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      |+|+.....  .....+....|+.++.++++++.+.+.+.+|+++|.
T Consensus        82 ~~ag~~~~~--g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           82 VPAGVPRKP--GMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             ECCCCCCCS--SCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EcCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            999965432  223467799999999999999999888888888763

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.07  E-value=4.2e-10  Score=85.48  Aligned_cols=102  Identities=13%  Similarity=0.096  Sum_probs=73.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVF   85 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi   85 (331)
                      .+|++|+|+|+ |.+|+.+++.|.+.|+ +|++++|++.....+...      +..++.+|..+.+.+.++ +.++|+||
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~------~~~~~~~d~~~~~~l~~~~~~~~d~vi   75 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASY------ATHAVIANATEENELLSLGIRNFEYVI   75 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTT------CSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh------CCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence            34678999998 9999999999999999 999998865443332221      456788999988777765 67899999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      ++++..            .+.|.    .+.+.+++.+.+++|..++.
T Consensus        76 ~~~~~~------------~~~~~----~~~~~~~~~~~~~ii~~~~~  106 (144)
T 2hmt_A           76 VAIGAN------------IQAST----LTTLLLKELDIPNIWVKAQN  106 (144)
T ss_dssp             ECCCSC------------HHHHH----HHHHHHHHTTCSEEEEECCS
T ss_pred             ECCCCc------------hHHHH----HHHHHHHHcCCCeEEEEeCC
Confidence            987631            12222    35667777787777765553

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.01  E-value=8.5e-10  Score=95.05  Aligned_cols=170  Identities=9%  Similarity=0.052  Sum_probs=104.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEec--CCCccch----hhcCCCCCCCcEEEEEccCCCchHHHHHhcCcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVF--PGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r--~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      |||+||||+||+|++++..|+..|. .++..+++  +......    +.......+..+++...+    +++.+.++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence            4899999999999999999998874 25777776  3221110    111000000022222211    12456789999


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      +|||+|+....  ......+.++.|+.+++++++++++++ +++|+++|--+ .-...   ..... .      ..++..
T Consensus        77 ~Vi~~Ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv-~~~t~---~~~k~-~------~~p~~r  142 (313)
T 1hye_A           77 VVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV-DVMTY---KALVD-S------KFERNQ  142 (313)
T ss_dssp             EEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH-HHHHH---HHHHH-H------CCCTTS
T ss_pred             EEEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH-HHHHH---HHHHh-h------CcChhc
Confidence            99999996542  223457789999999999999999998 88888887311 10000   00000 0      011224


Q ss_pred             chhH-HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Q 020110          163 WYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (331)
Q Consensus       163 ~y~~-sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~  198 (331)
                      .+|. +.+...++....++..|++..-++. .++|.+
T Consensus       143 viG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~H  178 (313)
T 1hye_A          143 VFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIGEH  178 (313)
T ss_dssp             EEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEECS
T ss_pred             EEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEeecc
Confidence            6787 7777777777777777776555554 567754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.98  E-value=2.6e-09  Score=80.91  Aligned_cols=74  Identities=20%  Similarity=0.122  Sum_probs=60.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih   86 (331)
                      +|++|+|+|+ |.+|+++++.|.+.|+ +|+++++++.....+.+.      ++.++.+|.++++.+.++ ++++|+||.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~~d~vi~   76 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE------GFDAVIADPTDESFYRSLDLEGVSAVLI   76 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT------TCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC------CCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence            4679999998 9999999999999999 999999887655554443      678899999999988776 467999997


Q ss_pred             ccc
Q 020110           87 VAS   89 (331)
Q Consensus        87 ~a~   89 (331)
                      +.+
T Consensus        77 ~~~   79 (141)
T 3llv_A           77 TGS   79 (141)
T ss_dssp             CCS
T ss_pred             ecC
Confidence            654

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.95  E-value=3.8e-10  Score=96.73  Aligned_cols=167  Identities=15%  Similarity=0.076  Sum_probs=100.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEec--CCCccch----hhcCCCCCCCcEEEEEccCCCchHHHHHhcCcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVF--PGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r--~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      |||+||||+||+|++++..|+..|+ .++..+++  +......    +........ ++++...   +    .+.++++|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~-~~~v~~~---~----~~a~~~aD   72 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDS-NTRVRQG---G----YEDTAGSD   72 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTC-CCEEEEC---C----GGGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCC-CcEEEeC---C----HHHhCCCC
Confidence            4899999999999999999998874 25777766  3321110    000000000 3333321   1    24578999


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      +|||+|+....  ......+.+..|+.+++++++++++.+.+.+|+++|--+ .-..    .........      ++..
T Consensus        73 vVi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv-~~~~----~~~~~~~~~------p~~r  139 (303)
T 1o6z_A           73 VVVITAGIPRQ--PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV-DLLN----RHLYEAGDR------SREQ  139 (303)
T ss_dssp             EEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH-HHHH----HHHHHHSSS------CGGG
T ss_pred             EEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH-HHHH----HHHHHHcCC------CHHH
Confidence            99999986543  223356789999999999999999998888888876311 0000    000000000      1112


Q ss_pred             chhH-HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Q 020110          163 WYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (331)
Q Consensus       163 ~y~~-sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~  198 (331)
                      ..|. +-+..-++....++..+++..-++ ..++|.+
T Consensus       140 viG~gt~Ld~~r~~~~la~~l~v~~~~v~-~~v~G~H  175 (303)
T 1o6z_A          140 VIGFGGRLDSARFRYVLSEEFDAPVQNVE-GTILGEH  175 (303)
T ss_dssp             EEECCHHHHHHHHHHHHHHHHTCCGGGEE-CCEEECS
T ss_pred             eeecccchhHHHHHHHHHHHhCcCHHHeE-EEEEeCC
Confidence            4666 555555555555666677655555 6778854

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.86  E-value=1.1e-08  Score=92.32  Aligned_cols=107  Identities=19%  Similarity=0.163  Sum_probs=76.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |++|+|+| +|++|+++++.|++.|+ +|++.+|+......+....   + ++..+.+|+.+.+++.++++++|+|||++
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~---~-~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGV---Q-HSTPISLDVNDDAALDAEVAKHDLVISLI   76 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTC---T-TEEEEECCTTCHHHHHHHHTTSSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhc---C-CceEEEeecCCHHHHHHHHcCCcEEEECC
Confidence            57899998 79999999999999999 9999998765443332211   1 57788999999999999999999999999


Q ss_pred             cCCCCCCCCCchhhhhHH--H-------HHHHHHHHHHHHhCCCC
Q 020110           89 SPCTLEDPVDPEKELILP--A-------VQGTLNVLEAAKRFGVR  124 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~--n-------~~~~~~l~~~~~~~~~~  124 (331)
                      +.....   ......++.  |       ...+.+++++|++.|++
T Consensus        77 ~~~~~~---~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           77 PYTFHA---TVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             C--CHH---HHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             ccccch---HHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            753210   001111111  1       23567889999998863

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.85  E-value=9.1e-10  Score=93.90  Aligned_cols=82  Identities=15%  Similarity=0.088  Sum_probs=63.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.+++|||||+|++|+++++.|++.|+ +|+++.|+......+.+...... ++.++.+|+++.+++.++++++|+|||+
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            457999999999999999999999999 89999997544332221100000 3456789999999999999999999999


Q ss_pred             ccCC
Q 020110           88 ASPC   91 (331)
Q Consensus        88 a~~~   91 (331)
                      ++..
T Consensus       196 ag~g  199 (287)
T 1lu9_A          196 GAIG  199 (287)
T ss_dssp             CCTT
T ss_pred             CCcc
Confidence            9753

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.79  E-value=2e-08  Score=75.74  Aligned_cols=98  Identities=17%  Similarity=0.163  Sum_probs=70.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~   87 (331)
                      +|+|+|+|+ |++|+.+++.|.+.|+ +|++++|++.....+.+..     ++.++.+|..+++.+.+. ++++|+||++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   76 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGIEDADMYIAV   76 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence            358999987 9999999999999999 9999998765443333211     456788999888777654 6789999998


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      ...         .    +.|.    .+.+.++..+.+++|..+
T Consensus        77 ~~~---------~----~~~~----~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           77 TGK---------E----EVNL----MSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             CSC---------H----HHHH----HHHHHHHHTTCCCEEEEC
T ss_pred             eCC---------c----hHHH----HHHHHHHHcCCCEEEEEe
Confidence            532         1    1222    455667777777777644

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.75  E-value=2.9e-08  Score=87.51  Aligned_cols=97  Identities=14%  Similarity=0.130  Sum_probs=72.5

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      |...+ |||+|.|| |++|+.+++.|. +.+ +|.+.+|+........+       .+..+..|+.|.+++.++++++|+
T Consensus        12 ~~g~~-mkilvlGa-G~vG~~~~~~L~-~~~-~v~~~~~~~~~~~~~~~-------~~~~~~~d~~d~~~l~~~~~~~Dv   80 (365)
T 3abi_A           12 IEGRH-MKVLILGA-GNIGRAIAWDLK-DEF-DVYIGDVNNENLEKVKE-------FATPLKVDASNFDKLVEVMKEFEL   80 (365)
T ss_dssp             ----C-CEEEEECC-SHHHHHHHHHHT-TTS-EEEEEESCHHHHHHHTT-------TSEEEECCTTCHHHHHHHHTTCSE
T ss_pred             ccCCc-cEEEEECC-CHHHHHHHHHHh-cCC-CeEEEEcCHHHHHHHhc-------cCCcEEEecCCHHHHHHHHhCCCE
Confidence            33344 48999998 999999999885 457 99998887655544433       567788999999999999999999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      ||+++++..                  ...++++|.++|+ ++|=+|
T Consensus        81 Vi~~~p~~~------------------~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           81 VIGALPGFL------------------GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             EEECCCGGG------------------HHHHHHHHHHHTC-EEEECC
T ss_pred             EEEecCCcc------------------cchHHHHHHhcCc-ceEeee
Confidence            999886421                  1258888888885 566544

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.70  E-value=2.8e-08  Score=88.76  Aligned_cols=102  Identities=20%  Similarity=0.196  Sum_probs=74.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC--CEEEEEecCCCccchhhcCCC-CCCCcEEEEEccCCCchHHHHHhcC--ccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLDSGAVSRAVEG--CKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   83 (331)
                      |++|+|+|| |++|+.+++.|.+.|.  .+|++.+|+......+..... ..+.++..+.+|++|.+++.+++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            579999999 9999999999999883  289999998665443332110 0011578899999999999999987  899


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      |||+++...                  ...++++|.+.++. ++-++
T Consensus        80 Vin~ag~~~------------------~~~v~~a~l~~g~~-vvD~a  107 (405)
T 4ina_A           80 VLNIALPYQ------------------DLTIMEACLRTGVP-YLDTA  107 (405)
T ss_dssp             EEECSCGGG------------------HHHHHHHHHHHTCC-EEESS
T ss_pred             EEECCCccc------------------ChHHHHHHHHhCCC-EEEec
Confidence            999987421                  13577788887765 44333

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.66  E-value=1.9e-07  Score=71.70  Aligned_cols=98  Identities=13%  Similarity=0.158  Sum_probs=70.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih   86 (331)
                      .++|+|+|+ |.+|+.+++.|.+.|+ +|++++|++.....+. ..      ++.++.+|..+++.+.+. ++++|+||.
T Consensus        19 ~~~v~IiG~-G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~------g~~~~~~d~~~~~~l~~~~~~~ad~Vi~   90 (155)
T 2g1u_A           19 SKYIVIFGC-GRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEF------SGFTVVGDAAEFETLKECGMEKADMVFA   90 (155)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTC------CSEEEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcC------CCcEEEecCCCHHHHHHcCcccCCEEEE
Confidence            468999996 9999999999999999 9999998876544433 21      566788999887777655 678999998


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHh-CCCCEEEEeCc
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR-FGVRRVVVTSS  131 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS  131 (331)
                      +.+.         +.    .    ...+.+.++. .+..++|...+
T Consensus        91 ~~~~---------~~----~----~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           91 FTND---------DS----T----NFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             CSSC---------HH----H----HHHHHHHHHHTSCCSEEEEECS
T ss_pred             EeCC---------cH----H----HHHHHHHHHHHCCCCeEEEEEC
Confidence            7642         11    1    2245556665 56566666443

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.59  E-value=1.6e-07  Score=76.07  Aligned_cols=74  Identities=16%  Similarity=0.268  Sum_probs=53.6

Q ss_pred             CCeEEEeCc----------------chHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch
Q 020110            9 EETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG   72 (331)
Q Consensus         9 ~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   72 (331)
                      +|+||||||                +|.+|.+++++|++.|+ +|+.+.|.......   .+   . ++..+  |+...+
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga-~V~lv~~~~~~~~~---~~---~-~~~~~--~v~s~~   72 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGY-EVCLITTKRALKPE---PH---P-NLSIR--EITNTK   72 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTC-EEEEEECTTSCCCC---CC---T-TEEEE--ECCSHH
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc---CC---C-CeEEE--EHhHHH
Confidence            579999999                99999999999999999 99999986542211   00   1 55554  444443


Q ss_pred             H----HHHHhcCccEEEEcccCCC
Q 020110           73 A----VSRAVEGCKGVFHVASPCT   92 (331)
Q Consensus        73 ~----~~~~~~~~d~vih~a~~~~   92 (331)
                      +    +.+.+.++|++||+||...
T Consensus        73 em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           73 DLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             HHHHHHHHhcCCCCEEEEcCcccc
Confidence            3    3344457999999999643

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.58  E-value=1.1e-07  Score=81.85  Aligned_cols=113  Identities=16%  Similarity=0.121  Sum_probs=77.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccchhhcCCCCCC-CcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGD-ANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |||.|+||+|++|+.++..|+..|  . +|.++++++ .......+..... .+++...+    ..++.++++++|+||+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~-ev~L~Di~~-~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~~~aDvVvi   74 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVS-RLTLYDIAH-TPGVAADLSHIETRATVKGYLG----PEQLPDCLKGCDVVVI   74 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCS-EEEEEESSS-HHHHHHHHTTSSSSCEEEEEES----GGGHHHHHTTCSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCc-EEEEEeCCc-cHHHHHHHhccCcCceEEEecC----CCCHHHHhCCCCEEEE
Confidence            489999999999999999999888  6 899999876 2111112211100 01221110    1356678999999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeC
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  130 (331)
                      +++.....  .....+.+..|+..+..+++.+.+...+ ++|++|
T Consensus        75 ~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           75 PAGVPRKP--GMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             CCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCcCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            99875432  2334677899999999999998887544 566654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.50  E-value=6.3e-07  Score=77.79  Aligned_cols=82  Identities=11%  Similarity=0.015  Sum_probs=61.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHH-HCCCCEEEEEecCCCccch------------hhcCCCCCCCcEEEEEccCCCchHHH
Q 020110            9 EETVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGSDSSH------------LFALPGAGDANLRVFEADVLDSGAVS   75 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~-~~g~~~V~~~~r~~~~~~~------------~~~~~~~~~~~~~~~~~Dl~~~~~~~   75 (331)
                      .|++|||||+..+|.+.+..|. ..|. .|+++.+.......            ..+.....+.....+.+|+.+++.+.
T Consensus        50 pK~vLVtGaSsGiGlA~AialAf~~GA-~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           50 PKNVLVLGCSNGYGLASRITAAFGYGA-ATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhhCCC-CEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            4799999999999999999887 6788 88888875433221            01111111227889999999998888


Q ss_pred             HHhc-------CccEEEEcccCC
Q 020110           76 RAVE-------GCKGVFHVASPC   91 (331)
Q Consensus        76 ~~~~-------~~d~vih~a~~~   91 (331)
                      ++++       ++|++||++|..
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHhcCCCCEEEEecccc
Confidence            7774       479999999965

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.49  E-value=1.2e-07  Score=81.90  Aligned_cols=174  Identities=16%  Similarity=0.075  Sum_probs=99.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CE-----EEEEecCCC--c-cchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TS-----INATVFPGS--D-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~-----V~~~~r~~~--~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (331)
                      +||+||||+|+||++++..|...|. .+     +.+++++..  . ......+....-.-..    ++.......+.+++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~~d   79 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAFKD   79 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHhCC
Confidence            5899999999999999999988763 23     788876531  1 0111111000000111    22222345567899


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC--EEEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      +|+|||+||....  ......+.++.|+..++++++++++++.+  +++.+|-.....-      ....+.....|..  
T Consensus        80 aDvVvitAg~prk--pG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t------~~~~~~~~~~p~~--  149 (333)
T 5mdh_A           80 LDVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNC------LTASKSAPSIPKE--  149 (333)
T ss_dssp             CSEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH------HHHHHTCTTSCGG--
T ss_pred             CCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHH------HHHHHHcCCCCcC--
Confidence            9999999986432  23345778999999999999999998765  4666663211000      0000111001110  


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCC
Q 020110          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~  200 (331)
                         ..-+.+-+..-++-...++..+++...++-..|+|.+..
T Consensus       150 ---~ig~~t~LDs~R~~~~la~~l~v~~~~v~~~vV~GeHgd  188 (333)
T 5mdh_A          150 ---NFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSS  188 (333)
T ss_dssp             ---GEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             ---EEEEEEhHHHHHHHHHHHHHhCcCHHHeeecEEEEcCCC
Confidence               111234444455555556666776666664446787643

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.48  E-value=1.1e-07  Score=86.02  Aligned_cols=78  Identities=17%  Similarity=0.253  Sum_probs=62.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .+|++|+|+|+ |++|+.+++.|++. |+ +|++.+|+......+... .    ++..+.+|+.+.+++.++++++|+||
T Consensus        21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~-~----~~~~~~~D~~d~~~l~~~l~~~DvVI   93 (467)
T 2axq_A           21 HMGKNVLLLGS-GFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKP-S----GSKAISLDVTDDSALDKVLADNDVVI   93 (467)
T ss_dssp             --CEEEEEECC-STTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGG-G----TCEEEECCTTCHHHHHHHHHTSSEEE
T ss_pred             CCCCEEEEECC-hHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHh-c----CCcEEEEecCCHHHHHHHHcCCCEEE
Confidence            35779999997 99999999999998 68 999999986554444322 1    56678899999988989999999999


Q ss_pred             EcccCC
Q 020110           86 HVASPC   91 (331)
Q Consensus        86 h~a~~~   91 (331)
                      |+++..
T Consensus        94 n~tp~~   99 (467)
T 2axq_A           94 SLIPYT   99 (467)
T ss_dssp             ECSCGG
T ss_pred             ECCchh
Confidence            998753

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.45  E-value=6.2e-07  Score=68.65  Aligned_cols=75  Identities=19%  Similarity=0.301  Sum_probs=58.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC-ccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~   87 (331)
                      ++|+|+|+ |.+|+++++.|.+.|+ +|+++++++. ....+.....  . ++.++.+|.++++.+.++ ++++|+||-+
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~--~-~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG--D-NADVIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC--T-TCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc--C-CCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence            58999996 9999999999999999 9999988742 2222221100  0 688999999999988876 8899999976


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      .+
T Consensus        79 ~~   80 (153)
T 1id1_A           79 SD   80 (153)
T ss_dssp             SS
T ss_pred             cC
Confidence            53

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.38  E-value=8.5e-07  Score=72.18  Aligned_cols=72  Identities=13%  Similarity=0.123  Sum_probs=59.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~a   88 (331)
                      |+|+|+|+ |.+|+++++.|.+.|+ +|+++++++.....+.+..     ++.++.+|.++++.+.++ ++++|+||-+.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAEVSKNDVVVILT   73 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence            48999997 9999999999999999 9999998876555433211     577899999999988876 68899999654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.37  E-value=8.1e-07  Score=66.88  Aligned_cols=72  Identities=15%  Similarity=0.183  Sum_probs=60.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~a   88 (331)
                      ++|+|+|+ |.+|+.+++.|.+.|+ +|+++++++.....+.+.      ++.++.+|.++++.+.++ ++++|+||-+.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~------g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDI-PLVVIETSRTRVDELRER------GVRAVLGNAANEEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT------TCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHc------CCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence            58999997 9999999999999999 999999987766655543      778899999999888765 57799998764


Q ss_pred             c
Q 020110           89 S   89 (331)
Q Consensus        89 ~   89 (331)
                      +
T Consensus        80 ~   80 (140)
T 3fwz_A           80 P   80 (140)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.34  E-value=1.9e-06  Score=69.64  Aligned_cols=73  Identities=15%  Similarity=0.149  Sum_probs=54.2

Q ss_pred             CCCeEEEeCc----------------chHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc
Q 020110            8 EEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS   71 (331)
Q Consensus         8 ~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   71 (331)
                      ++|+||||||                +|.+|.++++.|.+.|+ +|+.+.++....     .+.    ++.  ..|+.+.
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga-~V~l~~~~~~l~-----~~~----g~~--~~dv~~~   74 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGA-NVTLVSGPVSLP-----TPP----FVK--RVDVMTA   74 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTC-EEEEEECSCCCC-----CCT----TEE--EEECCSH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCC-EEEEEECCcccc-----cCC----CCe--EEccCcH
Confidence            4679999999                69999999999999999 999987754211     111    343  4677776


Q ss_pred             hHHHHH----hcCccEEEEcccCCC
Q 020110           72 GAVSRA----VEGCKGVFHVASPCT   92 (331)
Q Consensus        72 ~~~~~~----~~~~d~vih~a~~~~   92 (331)
                      +++.+.    +.++|++||+||...
T Consensus        75 ~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           75 LEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHHHHhcCCCCEEEECCcccC
Confidence            655443    356899999999653

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.33  E-value=1.4e-06  Score=68.74  Aligned_cols=73  Identities=18%  Similarity=0.086  Sum_probs=59.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH--hcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA--VEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~--~~~~d~vi   85 (331)
                      .++|+|+|+ |.+|+.+++.|.+. |+ +|++++|++.....+.+.      ++.++.+|.++++.+.++  ++++|+||
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~------g~~~~~gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSE------GRNVISGDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHT------TCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHC------CCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence            358999995 99999999999999 99 999999987665554443      567788999998877776  77899999


Q ss_pred             Eccc
Q 020110           86 HVAS   89 (331)
Q Consensus        86 h~a~   89 (331)
                      .+.+
T Consensus       111 ~~~~  114 (183)
T 3c85_A          111 LAMP  114 (183)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            7653

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.16  E-value=7.8e-07  Score=74.68  Aligned_cols=32  Identities=25%  Similarity=0.376  Sum_probs=26.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEec
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVF   42 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r   42 (331)
                      +||.|+|++|.+|+.+++.+.+. |+ ++++...
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~-elva~~d   38 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGV-QLGAALE   38 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTE-ECCCEEC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEe
Confidence            59999999999999999998864 67 7775443

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.14  E-value=3.4e-06  Score=72.94  Aligned_cols=169  Identities=11%  Similarity=0.031  Sum_probs=96.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch----hhcCCCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      ++||.|+|++|++|+.++..|+..|. .+|++++++......    +..... .  .     .++.-..+..+.++++|+
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~-~--~-----~~i~~t~d~~~al~dADv   79 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF-E--G-----LNLTFTSDIKEALTDAKY   79 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC-T--T-----CCCEEESCHHHHHTTEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC-C--C-----CceEEcCCHHHHhCCCCE
Confidence            56999999999999999999999983 389999875432211    111100 0  0     111112345677899999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCE--EEEeCccceeccCCCCCCccccCCCCCChhhhhccC
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR--VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (331)
                      ||.+||....  ......+.++.|+...+.+.+.+.+...+.  ++.+|-.....-  .   -..... ...+      .
T Consensus        80 VvitaG~p~k--pG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t--~---i~~k~s-g~p~------~  145 (343)
T 3fi9_A           80 IVSSGGAPRK--EGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITG--L---VTLIYS-GLKP------S  145 (343)
T ss_dssp             EEECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHH--H---HHHHHH-TCCG------G
T ss_pred             EEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHH--H---HHHHHc-CCCc------c
Confidence            9999986432  223356789999999999999998886544  345442100000  0   000000 0000      0


Q ss_pred             cchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC
Q 020110          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~  199 (331)
                      ...+.+-+...++....++..+++...++-..|+|.+.
T Consensus       146 rv~g~t~LDs~R~~~~la~~l~v~~~~v~~~~ViGeHg  183 (343)
T 3fi9_A          146 QVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGHG  183 (343)
T ss_dssp             GEEEECCHHHHHHHHHHHHHHTSCGGGEECCCEEESSG
T ss_pred             eEEEecCcHHHHHHHHHHHHhCcCHHHcccceEEEcCC
Confidence            12334444445555555666677666666456788653

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.07  E-value=3.9e-06  Score=67.09  Aligned_cols=74  Identities=18%  Similarity=0.112  Sum_probs=52.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHH---HHhc--Ccc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVS---RAVE--GCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~~--~~d   82 (331)
                      ..++|||+||+|.||..+++.+...|. +|++++|++.......+.      +... ..|..+.+..+   +...  ++|
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~------g~~~-~~d~~~~~~~~~~~~~~~~~~~D  109 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRL------GVEY-VGDSRSVDFADEILELTDGYGVD  109 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTT------CCSE-EEETTCSTHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCE-EeeCCcHHHHHHHHHHhCCCCCe
Confidence            357899999999999999999999999 999998876544444332      2211 24666554333   3332  489


Q ss_pred             EEEEccc
Q 020110           83 GVFHVAS   89 (331)
Q Consensus        83 ~vih~a~   89 (331)
                      +||++++
T Consensus       110 ~vi~~~g  116 (198)
T 1pqw_A          110 VVLNSLA  116 (198)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999986

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.06  E-value=1.1e-05  Score=69.26  Aligned_cols=119  Identities=13%  Similarity=0.177  Sum_probs=65.5

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccc----hhhcCCCCCCCcEEEEEccCCCchHHH
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS----HLFALPGAGDANLRVFEADVLDSGAVS   75 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~   75 (331)
                      |++..+.+++||.|+|+ |.+|+.++..|+..|. .+|++++++.....    .+........ +++....|.       
T Consensus         1 ~~~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~-~~~i~~~~~-------   71 (326)
T 3vku_A            1 MASITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTS-PKKIYSAEY-------   71 (326)
T ss_dssp             ------CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSC-CCEEEECCG-------
T ss_pred             CcccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcC-CcEEEECcH-------
Confidence            55666777889999996 9999999999998874 48898887543222    1111100001 334333322       


Q ss_pred             HHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           76 RAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        76 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      +.++++|+||.+|+....  ......+.++.|+...+.+.+.+.++..+.++.+-
T Consensus        72 ~a~~~aDiVvi~ag~~~k--pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvv  124 (326)
T 3vku_A           72 SDAKDADLVVITAGAPQK--PGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA  124 (326)
T ss_dssp             GGGTTCSEEEECCCCC------------------CHHHHHHHHHTTTCCSEEEEC
T ss_pred             HHhcCCCEEEECCCCCCC--CCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence            357899999999986432  12234677899999999999999888655444433

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.00  E-value=1.4e-05  Score=65.68  Aligned_cols=69  Identities=13%  Similarity=0.053  Sum_probs=56.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~a   88 (331)
                      ++|+|+|+ |.+|+.+++.|.+.|+  |+++++++.....+. .      ++.++.+|.++++.+.++ ++++|.||-+.
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~--v~vid~~~~~~~~~~-~------~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV--FVLAEDENVRKKVLR-S------GANFVHGDPTRVSDLEKANVRGARAVIVDL   79 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE--EEEESCGGGHHHHHH-T------TCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe--EEEEECCHHHHHHHh-c------CCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence            58999998 9999999999998886  788887765544443 2      788999999999988876 78899999764

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.98  E-value=4.8e-05  Score=65.36  Aligned_cols=170  Identities=11%  Similarity=0.127  Sum_probs=97.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch----hhcCCCCCCCcEEEEEccCCCchHHHHHhcCcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      ++++|.|+|+ |.+|+.++..|+..|+ .+|++++++......    +.......+.+++....|.       +.++++|
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~-------~a~~~aD   75 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY-------EDCKDAD   75 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG-------GGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH-------HHhCCCC
Confidence            3569999996 9999999999999884 489999876543221    2111000000344433332       3578999


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      +||.+|+....  ......+.++.|+.....+.+.+.+...+.+|.+-|--+         ...++-......  -++..
T Consensus        76 vVvi~ag~p~k--pG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv---------d~~t~~~~k~~g--~p~~r  142 (326)
T 3pqe_A           76 IVCICAGANQK--PGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV---------DILTYATWKFSG--LPKER  142 (326)
T ss_dssp             EEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---------HHHHHHHHHHHC--CCGGG
T ss_pred             EEEEecccCCC--CCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH---------HHHHHHHHHhcC--CCHHH
Confidence            99999986432  223356789999999999999998886544443333100         000000000000  00112


Q ss_pred             chhH-HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC
Q 020110          163 WYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       163 ~y~~-sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~  199 (331)
                      ..|. +-+..-++....++..|++..-++- .|+|.+.
T Consensus       143 viG~gt~LD~~R~~~~la~~lgv~~~~V~~-~V~GeHG  179 (326)
T 3pqe_A          143 VIGSGTTLDSARFRFMLSEYFGAAPQNVCA-HIIGEHG  179 (326)
T ss_dssp             EEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEBSSS
T ss_pred             EEeeccccHHHHHHHHHHHHhCCCHHHcee-eeeecCC
Confidence            3454 4444455555555566776555664 5888763

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.95  E-value=2.4e-05  Score=69.72  Aligned_cols=72  Identities=15%  Similarity=0.173  Sum_probs=61.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~   87 (331)
                      .++|+|+|. |-+|+.+++.|.+.|+ .|+++++++.....+...      ++.++.||.++++.+.++ ++++|+||-+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~------g~~vi~GDat~~~~L~~agi~~A~~viv~   75 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF------GMKVFYGDATRMDLLESAGAAKAEVLINA   75 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT------TCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC------CCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence            358999997 9999999999999999 999999988766665544      677899999999998877 6889999875


Q ss_pred             c
Q 020110           88 A   88 (331)
Q Consensus        88 a   88 (331)
                      .
T Consensus        76 ~   76 (413)
T 3l9w_A           76 I   76 (413)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.94  E-value=1.1e-05  Score=70.13  Aligned_cols=98  Identities=18%  Similarity=0.159  Sum_probs=59.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-----CCEEEEEecCCCccchhhcCCCC-CC-CcEEEEEccCCCchHHHHHhcCc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN-----YTSINATVFPGSDSSHLFALPGA-GD-ANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g-----~~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      |++|+|.||||.+|+.|++.|++.+     +.+|+++.+..+....+...... .+ ..+.+  .|+ ++    +.+.++
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~-~~----~~~~~~   81 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPT-EA----AVLGGH   81 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EEC-CH----HHHTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeee--ccC-CH----HHhcCC
Confidence            5799999999999999999999877     43777776433221212211110 00 01111  122 22    235589


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccc
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~  133 (331)
                      |+||.+.+...                  +..+++.+ +.|+ ++|-+|+.+
T Consensus        82 DvVf~alg~~~------------------s~~~~~~~-~~G~-~vIDlSa~~  113 (352)
T 2nqt_A           82 DAVFLALPHGH------------------SAVLAQQL-SPET-LIIDCGADF  113 (352)
T ss_dssp             SEEEECCTTSC------------------CHHHHHHS-CTTS-EEEECSSTT
T ss_pred             CEEEECCCCcc------------------hHHHHHHH-hCCC-EEEEECCCc
Confidence            99998876422                  22566666 6675 788889865

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.87  E-value=4.4e-06  Score=67.57  Aligned_cols=72  Identities=17%  Similarity=0.076  Sum_probs=49.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEE-ccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE-ADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |+|+|+||+|++|+.+++.|++.|+ +|++++|++.....+.+..     +. ++. .|+. ..++.+.++++|+||++.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~   72 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKAAEY-----RR-IAGDASIT-GMKNEDAAEACDIAVLTI   72 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHHHHH-----HH-HHSSCCEE-EEEHHHHHHHCSEEEECS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----cc-ccccCCCC-hhhHHHHHhcCCEEEEeC
Confidence            3799999999999999999999999 9999998765433322210     00 000 1222 234556677899999986


Q ss_pred             c
Q 020110           89 S   89 (331)
Q Consensus        89 ~   89 (331)
                      .
T Consensus        73 ~   73 (212)
T 1jay_A           73 P   73 (212)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.85  E-value=3e-05  Score=67.74  Aligned_cols=74  Identities=20%  Similarity=0.209  Sum_probs=54.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-----Ccc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d   82 (331)
                      ..++|||+|++|.||..+++.+...|. +|++++|++.......++      +... ..|+.+.+++.+.+.     ++|
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~------g~~~-~~d~~~~~~~~~~~~~~~~~~~D  240 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSI------GGEV-FIDFTKEKDIVGAVLKATDGGAH  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHT------TCCE-EEETTTCSCHHHHHHHHHTSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHc------CCce-EEecCccHhHHHHHHHHhCCCCC
Confidence            356899999999999999999999999 999999877665555443      2222 247764444433332     589


Q ss_pred             EEEEccc
Q 020110           83 GVFHVAS   89 (331)
Q Consensus        83 ~vih~a~   89 (331)
                      +||++++
T Consensus       241 ~vi~~~g  247 (347)
T 2hcy_A          241 GVINVSV  247 (347)
T ss_dssp             EEEECSS
T ss_pred             EEEECCC
Confidence            9999987

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.84  E-value=1.7e-05  Score=69.84  Aligned_cols=77  Identities=13%  Similarity=0.074  Sum_probs=58.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...++|+|+|+ |.||+.+++.|...|+ +|++++|++.......+...  . .   +.+|..+.+++.+.+.++|+||+
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g--~-~---~~~~~~~~~~l~~~~~~~DvVi~  235 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFG--G-R---VITLTATEANIKKSVQHADLLIG  235 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTT--T-S---EEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcC--c-e---EEEecCCHHHHHHHHhCCCEEEE
Confidence            34579999999 9999999999999999 99999987654433332111  0 2   45677777888888889999999


Q ss_pred             cccCC
Q 020110           87 VASPC   91 (331)
Q Consensus        87 ~a~~~   91 (331)
                      +++..
T Consensus       236 ~~g~~  240 (369)
T 2eez_A          236 AVLVP  240 (369)
T ss_dssp             CCC--
T ss_pred             CCCCC
Confidence            98753

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.83  E-value=4.3e-05  Score=66.08  Aligned_cols=178  Identities=14%  Similarity=0.097  Sum_probs=98.2

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh-hcCC-----CCCCCcEEEEEccCCCchHH
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALP-----GAGDANLRVFEADVLDSGAV   74 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~-----~~~~~~~~~~~~Dl~~~~~~   74 (331)
                      |+.++..+++||.|+|| |.+|+.++..|...|+-+|.+.++++...... ..+.     .....++..       ..++
T Consensus         1 ~~~~~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~   72 (331)
T 1pzg_A            1 MAPALVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSY   72 (331)
T ss_dssp             --CCCCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSH
T ss_pred             CCcCcCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCH
Confidence            44444444569999998 99999999999998863699898876433321 1000     000002221       1235


Q ss_pred             HHHhcCccEEEEcccCCCCCCCCC---chhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           75 SRAVEGCKGVFHVASPCTLEDPVD---PEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        75 ~~~~~~~d~vih~a~~~~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      .+.++++|+||-.++.........   ...+....|......+.+.+.+...+.++.+.|--+ .-..    ........
T Consensus        73 ~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~-~~~t----~~~~~~~~  147 (331)
T 1pzg_A           73 EAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPL-DCMV----KVMCEASG  147 (331)
T ss_dssp             HHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH-HHHH----HHHHHHHC
T ss_pred             HHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCch-HHHH----HHHHHhcC
Confidence            557899999999987543211100   245668888888999999888775444544444211 0000    00000000


Q ss_pred             CChhhhhccCcchhH-HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Q 020110          152 TDLEYCKSRKKWYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~-sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~  198 (331)
                      .      ++....|. +-+..-++....++..+++..-++ ..++|.+
T Consensus       148 ~------~~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~-~~v~G~H  188 (331)
T 1pzg_A          148 V------PTNMICGMACMLDSGRFRRYVADALSVSPRDVQ-ATVIGTH  188 (331)
T ss_dssp             C------CGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEE-CCEEBCS
T ss_pred             C------ChhcEEeccchHHHHHHHHHHHHHhCCCHHHce-EEEecCC
Confidence            0      11123444 555554555555556676555555 3678874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.78  E-value=2.6e-05  Score=67.65  Aligned_cols=74  Identities=15%  Similarity=0.154  Sum_probs=53.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh-----cCcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-----EGCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~d   82 (331)
                      ..++|||+||+|.||..+++.+...|+ +|++++|+........++      +.. ...|..+.+++.+.+     .++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~------g~~-~~~d~~~~~~~~~~~~~~~~~~~d  216 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQI------GFD-AAFNYKTVNSLEEALKKASPDGYD  216 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCS-EEEETTSCSCHHHHHHHHCTTCEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc------CCc-EEEecCCHHHHHHHHHHHhCCCCe
Confidence            357899999999999999999999999 999998876554444443      221 224766633333322     2589


Q ss_pred             EEEEccc
Q 020110           83 GVFHVAS   89 (331)
Q Consensus        83 ~vih~a~   89 (331)
                      +||++++
T Consensus       217 ~vi~~~g  223 (333)
T 1v3u_A          217 CYFDNVG  223 (333)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.72  E-value=2.2e-05  Score=71.13  Aligned_cols=71  Identities=20%  Similarity=0.252  Sum_probs=59.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih   86 (331)
                      .|+|+|.|+ |-+|++|++.|.++|| +|+++++++.....+.+..     ++.++.||-++++.++++ ++++|.+|-
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~-~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi~~ad~~ia   74 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENN-DITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGAQDADMLVA   74 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTE-EEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence            458999998 9999999999999999 9999998876665554311     678999999999988876 578999884

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.69  E-value=2.6e-05  Score=67.45  Aligned_cols=74  Identities=11%  Similarity=0.044  Sum_probs=52.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHH---HHhc--Ccc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVS---RAVE--GCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~~--~~d   82 (331)
                      ..++|||+||+|.||..+++.+...|+ +|++++|++.......++      +... ..|..+.+...   +...  ++|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~------g~~~-~~~~~~~~~~~~~~~~~~~~~~D  211 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA------GAWQ-VINYREEDLVERLKEITGGKKVR  211 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH------TCSE-EEETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCE-EEECCCccHHHHHHHHhCCCCce
Confidence            357999999999999999999999999 999999876554444443      1111 24665544333   3322  589


Q ss_pred             EEEEccc
Q 020110           83 GVFHVAS   89 (331)
Q Consensus        83 ~vih~a~   89 (331)
                      +||++++
T Consensus       212 ~vi~~~g  218 (327)
T 1qor_A          212 VVYDSVG  218 (327)
T ss_dssp             EEEECSC
T ss_pred             EEEECCc
Confidence            9999987

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.66  E-value=5.1e-05  Score=66.34  Aligned_cols=74  Identities=15%  Similarity=0.106  Sum_probs=53.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchH---HHHHhc--Ccc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAVE--GCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~d   82 (331)
                      ..++|||+||+|.+|..+++.+...|. +|++++|++.......++      +... ..|..+.+.   +.+...  ++|
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------ga~~-~~d~~~~~~~~~~~~~~~~~~~D  241 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQN------GAHE-VFNHREVNYIDKIKKYVGEKGID  241 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCSE-EEETTSTTHHHHHHHHHCTTCEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHc------CCCE-EEeCCCchHHHHHHHHcCCCCcE
Confidence            356899999999999999999999999 999999876655544443      2211 245555433   333333  589


Q ss_pred             EEEEccc
Q 020110           83 GVFHVAS   89 (331)
Q Consensus        83 ~vih~a~   89 (331)
                      +||++++
T Consensus       242 ~vi~~~G  248 (351)
T 1yb5_A          242 IIIEMLA  248 (351)
T ss_dssp             EEEESCH
T ss_pred             EEEECCC
Confidence            9999987

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.65  E-value=0.00046  Score=58.90  Aligned_cols=170  Identities=14%  Similarity=0.074  Sum_probs=97.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CC-CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN-NY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~-g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      |||.|+||+|.+|+.++..|... +. .++..+++++.......++..... ..++... ..  ....+.++++|+||-.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~-~~~v~~~-~~--~~~~~~~~~aDivii~   76 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPT-AVKIKGF-SG--EDATPALEGADVVLIS   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCS-SEEEEEE-CS--SCCHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCC-CceEEEe-cC--CCcHHHhCCCCEEEEe
Confidence            48999999999999999988775 42 288888876521111111111100 2222211 00  1123567899999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCccceeccCCCCCCccc----cCCCCCChhhhhccCc
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVF----DETSWTDLEYCKSRKK  162 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~----~E~~~~~~~~~~~~~~  162 (331)
                      ||....  ......+.++.|....+.+.+.+.+...+ .++.+|-.....       .++    -......     ++..
T Consensus        77 ag~~rk--pG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~~-------t~~a~~~~k~sg~~-----p~~r  142 (312)
T 3hhp_A           77 AGVARK--PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTT-------VAIAAEVLKKAGVY-----DKNK  142 (312)
T ss_dssp             CSCSCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHH-------HHHHHHHHHHTTCC-----CTTS
T ss_pred             CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchhH-------HHHHHHHHHHcCCC-----Ccce
Confidence            986432  23346788999999999999998877544 344444210000       000    0000000     1122


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~  198 (331)
                      ..|.+.+..-++....++..+++..-++ ..|+|.+
T Consensus       143 v~G~~~LD~~R~~~~la~~lgv~~~~v~-~~V~G~H  177 (312)
T 3hhp_A          143 LFGVTTLDIIRSNTFVAELKGKQPGEVE-VPVIGGH  177 (312)
T ss_dssp             EEECCHHHHHHHHHHHHHHHTCCGGGCC-CCEEECS
T ss_pred             EEEEechhHHHHHHHHHHHhCcChhHcc-eeEEecc
Confidence            4555544445555555666777766677 6788887

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.63  E-value=4.8e-05  Score=66.26  Aligned_cols=74  Identities=15%  Similarity=0.042  Sum_probs=53.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch---HHHHHhc--Ccc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~d   82 (331)
                      ..++|||+|++|.+|..+++.+...|+ +|++++|++.....+.++      +... ..|..+.+   .+.+...  ++|
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~------ga~~-~~d~~~~~~~~~~~~~~~~~~~d  237 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKAL------GADE-TVNYTHPDWPKEVRRLTGGKGAD  237 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH------TCSE-EEETTSTTHHHHHHHHTTTTCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc------CCCE-EEcCCcccHHHHHHHHhCCCCce
Confidence            356899999999999999999999999 999999876655544443      2211 14665543   2333332  589


Q ss_pred             EEEEccc
Q 020110           83 GVFHVAS   89 (331)
Q Consensus        83 ~vih~a~   89 (331)
                      +||++++
T Consensus       238 ~vi~~~g  244 (343)
T 2eih_A          238 KVVDHTG  244 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.62  E-value=4.9e-05  Score=66.27  Aligned_cols=74  Identities=18%  Similarity=0.162  Sum_probs=52.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCch----HHHHHh-cCc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSG----AVSRAV-EGC   81 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~----~~~~~~-~~~   81 (331)
                      ..++|||+||+|.||..+++.+...|. +|++++|++.....+. ++      +... ..|..+.+    .+.+.. .++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~------g~~~-~~d~~~~~~~~~~~~~~~~~~~  226 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKF------GFDD-AFNYKEESDLTAALKRCFPNGI  226 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTS------CCSE-EEETTSCSCSHHHHHHHCTTCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc------CCce-EEecCCHHHHHHHHHHHhCCCC
Confidence            356899999999999999999999999 9999998766555444 33      2211 23655432    233222 258


Q ss_pred             cEEEEccc
Q 020110           82 KGVFHVAS   89 (331)
Q Consensus        82 d~vih~a~   89 (331)
                      |+||++++
T Consensus       227 d~vi~~~g  234 (345)
T 2j3h_A          227 DIYFENVG  234 (345)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999986

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.61  E-value=4.1e-05  Score=66.45  Aligned_cols=75  Identities=15%  Similarity=0.106  Sum_probs=53.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchH---HHHHh--cCcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAV--EGCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~--~~~d   82 (331)
                      ..++|||+||+|.||..+++.+...|+ +|++++|++.....+.++      +... ..|..+.+.   +.+..  .++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~------g~~~-~~d~~~~~~~~~i~~~~~~~~~d  216 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKL------GCHH-TINYSTQDFAEVVREITGGKGVD  216 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH------TCSE-EEETTTSCHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCCE-EEECCCHHHHHHHHHHhCCCCCe
Confidence            356899999999999999999999999 999999876554444433      1111 236655433   33333  2589


Q ss_pred             EEEEcccC
Q 020110           83 GVFHVASP   90 (331)
Q Consensus        83 ~vih~a~~   90 (331)
                      +||++++.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.59  E-value=5.4e-05  Score=66.24  Aligned_cols=75  Identities=8%  Similarity=-0.077  Sum_probs=53.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchH---HHHHhc--Ccc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAVE--GCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~d   82 (331)
                      ..++|||+||+|.||..+++.+...|+ +|++++|++.....+.++      +.. ...|..+.+.   +.+...  ++|
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------g~~-~~~~~~~~~~~~~~~~~~~~~~~d  233 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKL------GAA-AGFNYKKEDFSEATLKFTKGAGVN  233 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH------TCS-EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCc-EEEecCChHHHHHHHHHhcCCCce
Confidence            356899999999999999999999999 999999876554444433      111 1245555433   333332  589


Q ss_pred             EEEEcccC
Q 020110           83 GVFHVASP   90 (331)
Q Consensus        83 ~vih~a~~   90 (331)
                      +||++++.
T Consensus       234 ~vi~~~G~  241 (354)
T 2j8z_A          234 LILDCIGG  241 (354)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCc
Confidence            99999874

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.57  E-value=9.4e-05  Score=63.31  Aligned_cols=111  Identities=14%  Similarity=0.101  Sum_probs=70.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh-hcCCCC-----CCCcEEEEEccCCCchHHHHHhcCccE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGA-----GDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      +||.|+|+ |.+|+.++..|...|+-+|.++++++...... ..+...     ...++... .|      . +.++++|+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d------~-~a~~~aD~   73 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NN------Y-ADTANSDV   73 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SC------G-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CC------H-HHHCCCCE
Confidence            58999999 99999999999999952688888765432211 111000     00022211 22      2 35789999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      ||.+++.....  .....+....|......+.+.+.+...+.+|.+.|
T Consensus        74 Vi~a~g~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           74 IVVTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             EEECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            99999864421  11234567888899999999998887666665554

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.57  E-value=0.00012  Score=63.59  Aligned_cols=99  Identities=10%  Similarity=0.087  Sum_probs=58.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |+||.|.||||.+|+.+++.|.+...-+++++.+..............-. +.  ....+.+.+   + +.++|+||.+.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~-g~--~~~~~~~~~---~-~~~vDvV~~a~   76 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLR-GR--TNLKFVPPE---K-LEPADILVLAL   76 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGT-TT--CCCBCBCGG---G-CCCCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhc-Cc--ccccccchh---H-hcCCCEEEEcC
Confidence            46999999999999999999987653277777654332222222111000 00  001122222   2 47899999887


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccc
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~  133 (331)
                      +...                  ...++..+.+.|+ ++|-+|+..
T Consensus        77 g~~~------------------s~~~a~~~~~aG~-~VId~Sa~~  102 (345)
T 2ozp_A           77 PHGV------------------FAREFDRYSALAP-VLVDLSADF  102 (345)
T ss_dssp             CTTH------------------HHHTHHHHHTTCS-EEEECSSTT
T ss_pred             CcHH------------------HHHHHHHHHHCCC-EEEEcCccc
Confidence            6421                  3356666667776 588888753

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.57  E-value=8.6e-05  Score=64.43  Aligned_cols=74  Identities=18%  Similarity=0.186  Sum_probs=53.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh-hcCCCCCCCcEEEEEccCCCchHHH---HHh-cCcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVS---RAV-EGCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~-~~~d   82 (331)
                      ..++|||+||+|-||..+++.+...|. +|++++|++.....+ .++      ++.. ..|..+.+...   +.. .++|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~------g~~~-~~~~~~~~~~~~~~~~~~~~~d  220 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEEL------GFDG-AIDYKNEDLAAGLKRECPKGID  220 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT------CCSE-EEETTTSCHHHHHHHHCTTCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc------CCCE-EEECCCHHHHHHHHHhcCCCce
Confidence            357999999999999999999999999 999999887665555 443      2211 24555543332   222 2589


Q ss_pred             EEEEccc
Q 020110           83 GVFHVAS   89 (331)
Q Consensus        83 ~vih~a~   89 (331)
                      +||++++
T Consensus       221 ~vi~~~g  227 (336)
T 4b7c_A          221 VFFDNVG  227 (336)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.56  E-value=6.3e-05  Score=64.24  Aligned_cols=81  Identities=9%  Similarity=0.023  Sum_probs=56.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC---ccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      +.+++||+|+ |-+|+.++..|.+.|..+|++..|+..   ....+.+...... ++.+...++.+.+++.+.+.++|+|
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~~~~~~~~~~~~~~l~~~l~~aDiI  230 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-DCKAQLFDIEDHEQLRKEIAESVIF  230 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-CCceEEeccchHHHHHhhhcCCCEE
Confidence            4679999997 899999999999999768999999833   2222211000000 2233445666667787888899999


Q ss_pred             EEcccC
Q 020110           85 FHVASP   90 (331)
Q Consensus        85 ih~a~~   90 (331)
                      |++...
T Consensus       231 INaTp~  236 (315)
T 3tnl_A          231 TNATGV  236 (315)
T ss_dssp             EECSST
T ss_pred             EECccC
Confidence            998754

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.56  E-value=0.00084  Score=57.60  Aligned_cols=113  Identities=14%  Similarity=0.139  Sum_probs=70.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch-hhcCCCC--CCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPGA--GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~-~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      ++||.|+|+ |.+|..++..|+..|. .+|.+++++...... ...+...  ...++++..   .+    .+.++++|+|
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~aDvV   78 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVKDCDVI   78 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhCCCCEE
Confidence            468999998 9999999999999873 479999887543321 1111110  001333322   12    2358899999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      |.+++.....  .....+....|+.....+.+.+.+...+.+|.+.|
T Consensus        79 ii~~g~p~k~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           79 VVTAGANRKP--GETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             EECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEcCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            9999864321  22345678999999999999988775444444444

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.56  E-value=0.00046  Score=58.47  Aligned_cols=70  Identities=21%  Similarity=0.218  Sum_probs=45.1

Q ss_pred             CCCe-EEEe-Ccc-----------------hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC-----------CCC
Q 020110            8 EEET-VCVT-GAN-----------------GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-----------GAG   57 (331)
Q Consensus         8 ~~~~-vlVt-Gat-----------------G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-----------~~~   57 (331)
                      .+++ |||| |||                 |-.|.++++++++.|+ .|+.+.+..........+.           ...
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga-~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGY-GVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTC-EEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCC-EEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            3456 9999 667                 9999999999999999 9999988544322111110           001


Q ss_pred             CCcEEEEEccCCCchHHHHHh
Q 020110           58 DANLRVFEADVLDSGAVSRAV   78 (331)
Q Consensus        58 ~~~~~~~~~Dl~~~~~~~~~~   78 (331)
                      +.++..+..|+...+++.+++
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av  134 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEAL  134 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHH
T ss_pred             ccccceeeeccccHHHHHHHH
Confidence            115566777776665554443

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.51  E-value=0.00045  Score=59.84  Aligned_cols=93  Identities=25%  Similarity=0.276  Sum_probs=55.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCC--EEEEEe-cCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYT--SINATV-FPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ++|+|.||||.+|+.+++.|+++++.  +++++. |+.... .+. +.   +..+.+  .|+ +++.    +.++|+||-
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~-~~~-~~---g~~i~~--~~~-~~~~----~~~~DvV~~   74 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ-RMG-FA---ESSLRV--GDV-DSFD----FSSVGLAFF   74 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC-EEE-ET---TEEEEC--EEG-GGCC----GGGCSEEEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC-ccc-cC---CcceEE--ecC-CHHH----hcCCCEEEE
Confidence            58999999999999999999976541  455553 221111 010 10   001222  222 1222    468999998


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccc
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~  133 (331)
                      +.+..                  .+..++..+.+.|++ +|.+|+.+
T Consensus        75 a~g~~------------------~s~~~a~~~~~aG~k-vId~Sa~~  102 (340)
T 2hjs_A           75 AAAAE------------------VSRAHAERARAAGCS-VIDLSGAL  102 (340)
T ss_dssp             CSCHH------------------HHHHHHHHHHHTTCE-EEETTCTT
T ss_pred             cCCcH------------------HHHHHHHHHHHCCCE-EEEeCCCC
Confidence            86531                  234567777778874 78778754

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.51  E-value=0.00013  Score=58.90  Aligned_cols=66  Identities=18%  Similarity=0.206  Sum_probs=48.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      .+|+|.|+| +|.+|+.+++.|.+.|+ +|++.+|++.....+.+.      ++...        +..++++++|+||.+
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~------g~~~~--------~~~~~~~~~DvVi~a   90 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGF-KVVVGSRNPKRTARLFPS------AAQVT--------FQEEAVSSPEVIFVA   90 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTC-CEEEEESSHHHHHHHSBT------TSEEE--------EHHHHTTSCSEEEEC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCcee--------cHHHHHhCCCEEEEC
Confidence            357899999 79999999999999999 999998876544333221      23321        345667889999987


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      ..
T Consensus        91 v~   92 (215)
T 2vns_A           91 VF   92 (215)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.50  E-value=0.00011  Score=63.75  Aligned_cols=69  Identities=12%  Similarity=0.074  Sum_probs=57.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~a   88 (331)
                      ++|+|+|+ |.+|+.+++.|.+.|+  |+++++++.... +.+.      ++.++.+|.++++.++++ ++++|.|+-+.
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~--v~vid~~~~~~~-~~~~------~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~  185 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV--FVLAEDENVRKK-VLRS------GANFVHGDPTRVSDLEKANVRGARAVIVDL  185 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE--EEEESCGGGHHH-HHHT------TCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc--EEEEeCChhhhh-HHhC------CcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence            48999997 9999999999999887  788887776555 4432      788999999999999877 78899999654

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.47  E-value=0.00061  Score=58.45  Aligned_cols=113  Identities=11%  Similarity=0.121  Sum_probs=72.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch----hhcCCCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      ++||.|+|+ |.+|..++..|+..|. .+|..+++++.....    +.......+..+++.. |  +    .+.++++|+
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~aDv   77 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDADL   77 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCCCE
Confidence            469999999 9999999999998873 388888876422111    0110000000333332 2  2    245789999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      ||..++....  ......+....|......+.+.+.+...+.+|.+.|
T Consensus        78 Vvi~ag~~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           78 VVICAGAAQK--PGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             EEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            9999986432  123345678999999999999988886554444444

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.47  E-value=0.00053  Score=58.99  Aligned_cols=119  Identities=13%  Similarity=0.169  Sum_probs=72.0

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch-hhcCCCC--CCCcEEEEEccCCCchHHHH
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPGA--GDANLRVFEADVLDSGAVSR   76 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~-~~~~~~~--~~~~~~~~~~Dl~~~~~~~~   76 (331)
                      |++....+.+||.|+|+ |.+|..++..|+..+. .+|..++++...... ..++...  ...++++.. |  +    .+
T Consensus         1 ~~~~~~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~   72 (326)
T 2zqz_A            1 MASITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YS   72 (326)
T ss_dssp             -----CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GG
T ss_pred             CCccccCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HH
Confidence            45555555679999998 9999999999988773 478888875432211 1111000  000333332 2  2    23


Q ss_pred             HhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCE-EEEe
Q 020110           77 AVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVT  129 (331)
Q Consensus        77 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~  129 (331)
                      .++++|+||..++.....  .....+....|+.....+.+.+.+...+- +|.+
T Consensus        73 a~~~aDvVii~ag~~~k~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  124 (326)
T 2zqz_A           73 DAKDADLVVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA  124 (326)
T ss_dssp             GGGGCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             HhCCCCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            478999999999864321  22346778899999999999888775443 4443

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.46  E-value=0.00019  Score=62.59  Aligned_cols=98  Identities=12%  Similarity=0.129  Sum_probs=58.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC-CCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      ++|.|.||+|.+|+.+++.|.+...-+|+++.+..+.......... ..+ .+   ..|+.-.+  .+.+.++|+||.+.
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~-~v---~~dl~~~~--~~~~~~vDvVf~at   90 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRA-QK---LPTLVSVK--DADFSTVDAVFCCL   90 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTT-SC---CCCCBCGG--GCCGGGCSEEEECC
T ss_pred             cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcC-cc---cccceecc--hhHhcCCCEEEEcC
Confidence            5899999999999999999988753277777654322222211100 000 11   12332222  33456799999887


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccc
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~  133 (331)
                      +...                  +...+..+ +.|+ ++|-.|+.+
T Consensus        91 p~~~------------------s~~~a~~~-~aG~-~VId~sa~~  115 (359)
T 1xyg_A           91 PHGT------------------TQEIIKEL-PTAL-KIVDLSADF  115 (359)
T ss_dssp             CTTT------------------HHHHHHTS-CTTC-EEEECSSTT
T ss_pred             Cchh------------------HHHHHHHH-hCCC-EEEECCccc
Confidence            5422                  23455666 6676 588888754

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.44  E-value=0.00015  Score=63.47  Aligned_cols=74  Identities=12%  Similarity=0.052  Sum_probs=51.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchH---HHHHhc-CccEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAVE-GCKGVF   85 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~-~~d~vi   85 (331)
                      ++|||+||+|.||..+++.+...|..+|++++++......+.+..     +.. ...|..+.+.   +.+... ++|+||
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-----g~~-~~~d~~~~~~~~~~~~~~~~~~d~vi  235 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-----GFD-AAINYKKDNVAEQLRESCPAGVDVYF  235 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-----CCS-EEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc-eEEecCchHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999999658998888765544444311     221 1246655432   222222 589999


Q ss_pred             Eccc
Q 020110           86 HVAS   89 (331)
Q Consensus        86 h~a~   89 (331)
                      +++|
T Consensus       236 ~~~G  239 (357)
T 2zb4_A          236 DNVG  239 (357)
T ss_dssp             ESCC
T ss_pred             ECCC
Confidence            9987

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.42  E-value=0.0002  Score=61.15  Aligned_cols=74  Identities=20%  Similarity=0.112  Sum_probs=54.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ...+|||+|++|.+|...++.+...|. +|+++++++.......++      +...+ .|..+.+++.+.+.++|+||+ 
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------ga~~~-~~~~~~~~~~~~~~~~d~vid-  195 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLAL------GAEEA-ATYAEVPERAKAWGGLDLVLE-  195 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHT------TCSEE-EEGGGHHHHHHHTTSEEEEEE-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc------CCCEE-EECCcchhHHHHhcCceEEEE-
Confidence            356999999999999999999999999 999999987766665554      22221 344431334444478999999 


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ++.
T Consensus       196 ~g~  198 (302)
T 1iz0_A          196 VRG  198 (302)
T ss_dssp             CSC
T ss_pred             CCH
Confidence            763

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.38  E-value=0.00015  Score=63.43  Aligned_cols=75  Identities=15%  Similarity=0.124  Sum_probs=53.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchH---HHHHh-cCccE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAV-EGCKG   83 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~-~~~d~   83 (331)
                      ...+|||+||+|.||...++.+...|. +|++++|++.....+.++      +... ..|..+.+.   +.+.. .++|+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~-~~~~~~~~~~~~~~~~~~~g~Dv  238 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERL------GAKR-GINYRSEDFAAVIKAETGQGVDI  238 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH------TCSE-EEETTTSCHHHHHHHHHSSCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc------CCCE-EEeCCchHHHHHHHHHhCCCceE
Confidence            356899999999999999999999999 999999887665555543      2211 134444332   32222 35899


Q ss_pred             EEEcccC
Q 020110           84 VFHVASP   90 (331)
Q Consensus        84 vih~a~~   90 (331)
                      ||++++.
T Consensus       239 vid~~g~  245 (353)
T 4dup_A          239 ILDMIGA  245 (353)
T ss_dssp             EEESCCG
T ss_pred             EEECCCH
Confidence            9999873

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.35  E-value=0.00077  Score=56.23  Aligned_cols=95  Identities=22%  Similarity=0.315  Sum_probs=57.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCCEEEE-EecCCCccc--hhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINA-TVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~-~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      |+||.|+|++|.+|+.+++.+.+. ++ ++++ ++|+.....  ...++.+..        .++.-.+++.+++.++|+|
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~-eLv~~~d~~~~~~~G~d~gel~g~~--------~gv~v~~dl~~ll~~~DVV   77 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDA-TLVGALDRTGSPQLGQDAGAFLGKQ--------TGVALTDDIERVCAEADYL   77 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTE-EEEEEBCCTTCTTTTSBTTTTTTCC--------CSCBCBCCHHHHHHHCSEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEEecCcccccccHHHHhCCC--------CCceecCCHHHHhcCCCEE
Confidence            679999999999999999999876 56 7666 455432211  111111100        0222234566667789999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      |+++.          +.        .+...++.|.++|+ .+|. +|+
T Consensus        78 IDfT~----------p~--------a~~~~~~~al~~G~-~vVi-gTT  105 (272)
T 4f3y_A           78 IDFTL----------PE--------GTLVHLDAALRHDV-KLVI-GTT  105 (272)
T ss_dssp             EECSC----------HH--------HHHHHHHHHHHHTC-EEEE-CCC
T ss_pred             EEcCC----------HH--------HHHHHHHHHHHcCC-CEEE-ECC
Confidence            99753          22        23456666777775 3443 543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.34  E-value=0.0018  Score=55.66  Aligned_cols=112  Identities=12%  Similarity=0.103  Sum_probs=73.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch----hhcCCCCCCCcEEEE-EccCCCchHHHHHhcCc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVF-EADVLDSGAVSRAVEGC   81 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~   81 (331)
                      .+++|.|+|+ |.+|+.++..|+..|. .+|+.++++......    +........ ....+ ..|   .    +.++++
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~-~~~i~~~~d---~----~~~~~a   88 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLK-TPKIVSSKD---Y----SVTANS   88 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCS-CCEEEECSS---G----GGGTTE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccC-CCeEEEcCC---H----HHhCCC
Confidence            4579999997 9999999999999884 478888876432211    111100000 11222 222   2    247899


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeC
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  130 (331)
                      |+||.+||....  ......+.++.|....+.+.+.+.++..+ .++.+|
T Consensus        89 DiVvi~aG~~~k--pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           89 KLVIITAGARQQ--EGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             EEEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CEEEEccCCCCC--CCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999986432  23346788999999999999998887544 344444

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.34  E-value=0.0012  Score=56.58  Aligned_cols=112  Identities=17%  Similarity=0.128  Sum_probs=72.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch-hhcCCCC---CCCcEEEE-EccCCCchHHHHHhcCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGA---GDANLRVF-EADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~---~~~~~~~~-~~Dl~~~~~~~~~~~~~d~   83 (331)
                      +++|.|+|+ |.+|+.++..|...|..+|+++++++..... ...+...   .....++. ..|   .    +.++++|+
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d---~----~a~~~aDv   76 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND---Y----KDLENSDV   76 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC---G----GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC---H----HHHCCCCE
Confidence            468999995 9999999999999885378888887654221 1111000   00012222 122   1    46789999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeC
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  130 (331)
                      ||..++....  ......+.+..|+.....+.+.+.+...+ .++.+|
T Consensus        77 VIi~ag~p~k--~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           77 VIVTAGVPRK--PGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             EEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEcCCcCCC--CCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9999986432  22335677899999999999998887654 444443

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.33  E-value=0.0018  Score=55.49  Aligned_cols=114  Identities=15%  Similarity=0.162  Sum_probs=71.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchh-hcC---CCCCCCcEEEEEccCCCchHHHHHhcCc
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHL-FAL---PGAGDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~-~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      .+++||.|+|+ |.+|+.++..|+..| ..+|+++++++...... ..+   ....+..+++.. |  +.    +.++++
T Consensus         4 ~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~----~al~~a   75 (316)
T 1ldn_A            4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY----DDCRDA   75 (316)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG----GGTTTC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH----HHhCCC
Confidence            34579999998 999999999998877 23899998875322111 110   000000233332 1  11    357899


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      |+||-+++......  ....+....|......+.+.+.+...+.++++-
T Consensus        76 DvViia~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~  122 (316)
T 1ldn_A           76 DLVVICAGANQKPG--ETRLDLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (316)
T ss_dssp             SEEEECCSCCCCTT--TCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             CEEEEcCCCCCCCC--CCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEe
Confidence            99999988654322  223566788888888899888777544344333

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.32  E-value=0.00018  Score=60.84  Aligned_cols=65  Identities=17%  Similarity=0.261  Sum_probs=48.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      ||+|.|+|+||.+|+.+++.|.+.|+ +|++.+|++.....+.+.      ++     +..+   ..+.++++|+||-+.
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~------g~-----~~~~---~~~~~~~aDvVi~av   75 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGM------GI-----PLTD---GDGWIDEADVVVLAL   75 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHT------TC-----CCCC---SSGGGGTCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc------CC-----CcCC---HHHHhcCCCEEEEcC
Confidence            56999999999999999999999999 999998876554444332      21     1122   224567899999764

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.32  E-value=0.00033  Score=60.10  Aligned_cols=111  Identities=15%  Similarity=0.120  Sum_probs=71.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch----hhcCC--CCCCCcEEEEEccCCCchHHHHHhcCcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH----LFALP--GAGDANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~----~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      ++||.|+|+ |.+|..++..|...|+.+|+++++++.....    +....  .....++.. ..|      . +.++++|
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d------~-~a~~~aD   77 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND------Y-AAIEGAD   77 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS------G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC------H-HHHCCCC
Confidence            569999998 9999999999999885478888887654321    11100  000002221 122      1 4678999


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeC
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  130 (331)
                      +||.+++.....  .....+.+..|+.....+.+.+.+...+ .++.+|
T Consensus        78 iVIiaag~p~k~--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           78 VVIVTAGVPRKP--GMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             EEEECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEEccCcCCCC--CCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            999999864321  2234567889999999999998887644 344444

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.30  E-value=0.00011  Score=61.78  Aligned_cols=75  Identities=13%  Similarity=0.104  Sum_probs=50.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.++++|+|+ |.+|+.++..|.+.|. +|++..|+......+.+...... .+.  ..|+   +++.+  .++|+||++
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~~~--~~~DivVn~  187 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DELEG--HEFDLIINA  187 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGGTT--CCCSEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HHhcc--CCCCEEEEC
Confidence            4579999998 7799999999999998 99999988655433332111100 121  1232   22222  579999999


Q ss_pred             ccCCC
Q 020110           88 ASPCT   92 (331)
Q Consensus        88 a~~~~   92 (331)
                      ++...
T Consensus       188 t~~~~  192 (271)
T 1nyt_A          188 TSSGI  192 (271)
T ss_dssp             CSCGG
T ss_pred             CCCCC
Confidence            98543

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.29  E-value=0.003  Score=53.25  Aligned_cols=111  Identities=14%  Similarity=0.066  Sum_probs=73.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccc-hhhcCCC----CCCCcEEEEE-ccCCCchHHHHHhcCcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS-HLFALPG----AGDANLRVFE-ADVLDSGAVSRAVEGCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~-~~~~~~~----~~~~~~~~~~-~Dl~~~~~~~~~~~~~d   82 (331)
                      |||.|+|+ |.||+.++..|+.++. .++..++.++.... ....+..    ... ...... .|.       +.++++|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~-~~~i~~~~d~-------~~~~~aD   71 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK-YPKIVGGADY-------SLLKGSE   71 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTC-CCEEEEESCG-------GGGTTCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCC-CCeEecCCCH-------HHhCCCC
Confidence            48999996 9999999999988873 58888887542211 0001000    000 222222 232       2478999


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      +||-.||....  ......+.++.|..-.+.+.+.+.++..+-++.+-|
T Consensus        72 vVvitAG~prk--pGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           72 IIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EEEECCCCCCC--SSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEEecCCCCC--CCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            99999986543  233468899999999999999999887665555443

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.28  E-value=0.00018  Score=62.05  Aligned_cols=75  Identities=17%  Similarity=0.141  Sum_probs=53.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch---HHHHHhc--Ccc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~d   82 (331)
                      ...+|||+||+|.+|...++.+...|. +|+++++++.......++      +... ..|..+.+   .+.+...  ++|
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------Ga~~-~~~~~~~~~~~~~~~~~~~~g~D  211 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKAL------GAWE-TIDYSHEDVAKRVLELTDGKKCP  211 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH------TCSE-EEETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCCE-EEeCCCccHHHHHHHHhCCCCce
Confidence            356999999999999999999999999 999999877665555443      2111 13444433   3333332  589


Q ss_pred             EEEEcccC
Q 020110           83 GVFHVASP   90 (331)
Q Consensus        83 ~vih~a~~   90 (331)
                      +||++++.
T Consensus       212 vvid~~g~  219 (325)
T 3jyn_A          212 VVYDGVGQ  219 (325)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCh
Confidence            99999874

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.27  E-value=0.0011  Score=56.62  Aligned_cols=111  Identities=17%  Similarity=0.173  Sum_probs=72.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC--Cccchh-hcCCC-----CCCCcEEEEEccCCCchHHHHHhcC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG--SDSSHL-FALPG-----AGDANLRVFEADVLDSGAVSRAVEG   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~--~~~~~~-~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (331)
                      +++|.|+|+ |.+|+.++..|...|+.+|+++++++  ...... .++..     ....++.. ..|   .    +.+++
T Consensus         8 ~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~----~a~~~   78 (315)
T 3tl2_A            8 RKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---Y----ADTAD   78 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---G----GGGTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---H----HHhCC
Confidence            468999997 99999999999998865788888873  111110 00000     00001211 112   1    35789


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeC
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  130 (331)
                      +|+||-+++....  ......+.++.|+...+.+.+.+.+...+ .++.+|
T Consensus        79 aDvVIiaag~p~k--pg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           79 SDVVVITAGIARK--PGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             CSEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            9999999986432  22335778999999999999998877544 344444

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.26  E-value=0.00047  Score=59.06  Aligned_cols=68  Identities=18%  Similarity=0.231  Sum_probs=51.2

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      ..+||+|.|.|. |.+|+.+++.|.+.|+ +|++.+|++.....+.+.      ++..       ..+..++++++|+||
T Consensus        18 ~~~m~~I~iIG~-G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~------g~~~-------~~~~~~~~~~aDvvi   82 (310)
T 3doj_A           18 GSHMMEVGFLGL-GIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEH------GASV-------CESPAEVIKKCKYTI   82 (310)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHT------TCEE-------CSSHHHHHHHCSEEE
T ss_pred             cccCCEEEEECc-cHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC------CCeE-------cCCHHHHHHhCCEEE
Confidence            446789999985 9999999999999999 999999987766555442      2221       233556667789888


Q ss_pred             Ecc
Q 020110           86 HVA   88 (331)
Q Consensus        86 h~a   88 (331)
                      -+.
T Consensus        83 ~~v   85 (310)
T 3doj_A           83 AML   85 (310)
T ss_dssp             ECC
T ss_pred             EEc
Confidence            764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.26  E-value=0.00037  Score=60.54  Aligned_cols=75  Identities=13%  Similarity=0.165  Sum_probs=54.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch---HHHHHhc--Ccc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~d   82 (331)
                      ...+|||+|++|.+|...++.+...|. +|+++++++.....+.++      +...+ .|..+.+   .+.+...  ++|
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l------ga~~~-~~~~~~~~~~~~~~~~~~~g~D  215 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRL------GAAYV-IDTSTAPLYETVMELTNGIGAD  215 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH------TCSEE-EETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhC------CCcEE-EeCCcccHHHHHHHHhCCCCCc
Confidence            356999999999999999999988999 999999988776666554      22211 3444433   2333332  589


Q ss_pred             EEEEcccC
Q 020110           83 GVFHVASP   90 (331)
Q Consensus        83 ~vih~a~~   90 (331)
                      +||++++.
T Consensus       216 vvid~~g~  223 (340)
T 3gms_A          216 AAIDSIGG  223 (340)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999873

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.25  E-value=0.00013  Score=63.94  Aligned_cols=75  Identities=17%  Similarity=0.143  Sum_probs=54.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      .++|+|+|+ |-+|+.+++.|...|. +|++++|++.....+.+....   .+..+   ..+.+++.+.+.++|+||+++
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS---RVELL---YSNSAEIETAVAEADLLIGAV  238 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG---GSEEE---ECCHHHHHHHHHTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc---eeEee---eCCHHHHHHHHcCCCEEEECC
Confidence            479999999 9999999999999999 999999986554444322110   22121   224456677778999999998


Q ss_pred             cCC
Q 020110           89 SPC   91 (331)
Q Consensus        89 ~~~   91 (331)
                      +..
T Consensus       239 ~~~  241 (361)
T 1pjc_A          239 LVP  241 (361)
T ss_dssp             CCT
T ss_pred             CcC
Confidence            753

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.25  E-value=4.3e-05  Score=57.59  Aligned_cols=71  Identities=6%  Similarity=0.053  Sum_probs=50.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      .++|+|+|+ |.+|+.+++.|.+.|+ +|++.+|++.....+.+..     +....     ..+++.+.++++|+||.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~-----~~~~~-----~~~~~~~~~~~~Divi~at   88 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKY-----EYEYV-----LINDIDSLIKNNDVIITAT   88 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHH-----TCEEE-----ECSCHHHHHHTCSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHh-----CCceE-----eecCHHHHhcCCCEEEEeC
Confidence            579999996 9999999999999999 7999988765544332211     22221     2234566778999999987


Q ss_pred             cCC
Q 020110           89 SPC   91 (331)
Q Consensus        89 ~~~   91 (331)
                      +..
T Consensus        89 ~~~   91 (144)
T 3oj0_A           89 SSK   91 (144)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            643

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.24  E-value=0.0028  Score=52.33  Aligned_cols=102  Identities=12%  Similarity=0.044  Sum_probs=65.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--------------------CC-CCCcEEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GA-GDANLRVFEAD   67 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~-~~~~~~~~~~D   67 (331)
                      .++|+|+|+ |-+|+++++.|...|..+|++++++.-+..++.+..                    .. ...+++.+..+
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  109 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  109 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence            368999997 889999999999999768999988763322222211                    00 01135555566


Q ss_pred             CCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           68 VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        68 l~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      +. .+.+.++++++|+||.+...         ..        .-..+.++|++.+++ +|+.+
T Consensus       110 ~~-~~~~~~~~~~~DvVi~~~d~---------~~--------~~~~l~~~~~~~~~p-~i~~~  153 (249)
T 1jw9_B          110 LD-DAELAALIAEHDLVLDCTDN---------VA--------VRNQLNAGCFAAKVP-LVSGA  153 (249)
T ss_dssp             CC-HHHHHHHHHTSSEEEECCSS---------HH--------HHHHHHHHHHHHTCC-EEEEE
T ss_pred             CC-HhHHHHHHhCCCEEEEeCCC---------HH--------HHHHHHHHHHHcCCC-EEEee
Confidence            64 34566778899999987431         11        123456677776754 66644

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.23  E-value=0.00053  Score=59.36  Aligned_cols=75  Identities=13%  Similarity=0.060  Sum_probs=53.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch---HHHHHh--cCcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAV--EGCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~--~~~d   82 (331)
                      ...+|||+||+|.+|...++.+...|. +|+++++++.......++      +... ..|..+.+   .+.+..  .++|
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------ga~~-~~~~~~~~~~~~~~~~~~~~g~D  219 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEY------GAEY-LINASKEDILRQVLKFTNGKGVD  219 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCSE-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCcE-EEeCCCchHHHHHHHHhCCCCce
Confidence            356899999999999999999999999 999999876665555554      2111 13444433   333333  2589


Q ss_pred             EEEEcccC
Q 020110           83 GVFHVASP   90 (331)
Q Consensus        83 ~vih~a~~   90 (331)
                      +||++++.
T Consensus       220 ~vid~~g~  227 (334)
T 3qwb_A          220 ASFDSVGK  227 (334)
T ss_dssp             EEEECCGG
T ss_pred             EEEECCCh
Confidence            99999874

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.23  E-value=0.00099  Score=57.55  Aligned_cols=94  Identities=16%  Similarity=0.104  Sum_probs=56.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC---CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN---YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g---~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      |++|.|.||||.+|+.+++.|++.+   . +|+++....+.-..+. +.   +..+.+...|   ++    .+.++|+||
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~-elv~i~s~~~~G~~~~-~~---~~~i~~~~~~---~~----~~~~vDvVf   70 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVD-ELFLLASERSEGKTYR-FN---GKTVRVQNVE---EF----DWSQVHIAL   70 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEE-EEEEEECTTTTTCEEE-ET---TEEEEEEEGG---GC----CGGGCSEEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCE-EEEEEECCCCCCCcee-ec---CceeEEecCC---hH----HhcCCCEEE
Confidence            5799999999999999999999873   4 6776653211111111 10   0023332222   22    235799999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~  133 (331)
                      -+.+..                  .+...+..+.+.|+ ++|-.|+.+
T Consensus        71 ~a~g~~------------------~s~~~a~~~~~~G~-~vId~s~~~   99 (336)
T 2r00_A           71 FSAGGE------------------LSAKWAPIAAEAGV-VVIDNTSHF   99 (336)
T ss_dssp             ECSCHH------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             ECCCch------------------HHHHHHHHHHHcCC-EEEEcCCcc
Confidence            876531                  13456666667786 677778763

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.20  E-value=0.00033  Score=60.38  Aligned_cols=100  Identities=17%  Similarity=0.142  Sum_probs=58.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCC---CccchhhcCCC-CCC-CcEEEEEccCCCchHHHHHhcCcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPG---SDSSHLFALPG-AGD-ANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~---~~~~~~~~~~~-~~~-~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      |++|.|+||||++|+.|++.|.+. .+ ++..+.++.   +.-..+.+... ..+ ....+...  .+.+   ++++++|
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~-el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~D   77 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHM-NITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVD   77 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTE-EEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCS
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCC-cEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCC
Confidence            679999999999999999999885 46 777775543   22222221100 000 01122111  0122   2337899


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~  133 (331)
                      +||-+.+.                  ..+..++..+.+.|+ ++|=.|+.+
T Consensus        78 vvf~a~p~------------------~~s~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           78 VVFLATAH------------------EVSHDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             EEEECSCH------------------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             EEEECCCh------------------HHHHHHHHHHHHCCC-EEEEcCCcc
Confidence            99976542                  113356666667776 577778764

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.19  E-value=0.00039  Score=60.97  Aligned_cols=97  Identities=20%  Similarity=0.170  Sum_probs=63.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch---HHHHHh-cCccE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAV-EGCKG   83 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~-~~~d~   83 (331)
                      ...+|||+||+|.+|...++.+...|. +|+++++++.....+.++      ++..+ .|..+.+   .+.+.. .++|+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~------Ga~~~-~~~~~~~~~~~~~~~~~~g~D~  234 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSL------GCDRP-INYKTEPVGTVLKQEYPEGVDV  234 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCSEE-EETTTSCHHHHHHHHCTTCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHc------CCcEE-EecCChhHHHHHHHhcCCCCCE
Confidence            356999999999999999999999999 999999876555555543      22221 2443332   222222 25899


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      ||++++.           .       .....+++++..|  ++|.+++.
T Consensus       235 vid~~g~-----------~-------~~~~~~~~l~~~G--~iv~~g~~  263 (362)
T 2c0c_A          235 VYESVGG-----------A-------MFDLAVDALATKG--RLIVIGFI  263 (362)
T ss_dssp             EEECSCT-----------H-------HHHHHHHHEEEEE--EEEECCCG
T ss_pred             EEECCCH-----------H-------HHHHHHHHHhcCC--EEEEEeCC
Confidence            9999872           0       1223455555443  78888764

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.18  E-value=0.0014  Score=57.64  Aligned_cols=69  Identities=13%  Similarity=0.166  Sum_probs=53.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .+++|+|+|+ |.+|+.+++.+.+.|+ +|++++.++.....  ..      --.++..|..|.+.+.++++++|+|..
T Consensus        11 ~~~~IlIlG~-G~lg~~la~aa~~lG~-~viv~d~~~~~p~~--~~------ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           11 FGATIGIIGG-GQLGKMMAQSAQKMGY-KVVVLDPSEDCPCR--YV------AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCTTCTTG--GG------SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEECCCCChhh--hh------CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            4679999997 8999999999999999 99999765443211  11      124667999999999999988998754

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.18  E-value=0.001  Score=59.45  Aligned_cols=95  Identities=9%  Similarity=0.155  Sum_probs=62.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-C--CEEEEEecCCCccchhhcCCCCCCCcEEEEEccC--CCchH-HHHHhcCccE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN-Y--TSINATVFPGSDSSHLFALPGAGDANLRVFEADV--LDSGA-VSRAVEGCKG   83 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g-~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl--~~~~~-~~~~~~~~d~   83 (331)
                      ++|+|.| .|-||+.+++.|.+.. +  .+|+..+.+....+.....      ++++...++  .|.++ +.+++++.|+
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~------g~~~~~~~Vdadnv~~~l~aLl~~~Dv   86 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQY------GVSFKLQQITPQNYLEVIGSTLEENDF   86 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHH------TCEEEECCCCTTTHHHHTGGGCCTTCE
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhc------CCceeEEeccchhHHHHHHHHhcCCCE
Confidence            5899999 5999999999999864 3  2577776654433322222      344555555  44433 5567777799


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      |||++-...                  ...++++|.+.|+   -|++++
T Consensus        87 VIN~s~~~~------------------~l~Im~acleaGv---~YlDTa  114 (480)
T 2ph5_A           87 LIDVSIGIS------------------SLALIILCNQKGA---LYINAA  114 (480)
T ss_dssp             EEECCSSSC------------------HHHHHHHHHHHTC---EEEESS
T ss_pred             EEECCcccc------------------CHHHHHHHHHcCC---CEEECC
Confidence            998653321                  3468999999885   355654

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.17  E-value=0.0033  Score=53.15  Aligned_cols=165  Identities=13%  Similarity=0.081  Sum_probs=96.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccc--h--hhcCC-CCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS--H--LFALP-GAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~--~--~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      |||.|+|+ |.+|+.++..|...|+ .+|...++++....  .  +.... .... ..++.-.  .|    .+.++++|+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~-~~~i~~t--~d----~~a~~~aDi   72 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK-YPKIVGG--AD----YSLLKGSEI   72 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTC-CCEEEEE--SC----GGGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCC-CCEEEEe--CC----HHHhCCCCE
Confidence            48999999 9999999999998875 37999988764322  0  11100 0000 2222211  12    346789999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCE-EEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      ||.+++....  ......+.++.|....+.+.+.+.+.+.+- ++.+|-.....  ..    .......      -++..
T Consensus        73 VViaag~~~k--pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd~~--t~----~~~k~~g------~p~~r  138 (294)
T 1oju_A           73 IVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVM--TY----IMWKESG------KPRNE  138 (294)
T ss_dssp             EEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHH--HH----HHHHHSC------CCTTS
T ss_pred             EEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcchHH--HH----HHHHhcC------CCHHH
Confidence            9999986432  223357789999999999999998886544 44444210000  00    0000000      01112


Q ss_pred             chhH-HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC
Q 020110          163 WYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       163 ~y~~-sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~  199 (331)
                      ..|. +-+..-++-...+ +.+++...  -..|+|.+.
T Consensus       139 viG~gt~LD~~R~~~~la-~l~v~~~~--~~~V~G~Hg  173 (294)
T 1oju_A          139 VFGMGNQLDSQRLKERLY-NAGARNIR--RAWIIGEHG  173 (294)
T ss_dssp             EEECSHHHHHHHHHHHHH-HTTCBSCC--CCCEEBCSS
T ss_pred             EeecccccHHHHHHHHHH-HhCCCccC--ceEEEecCC
Confidence            4566 5565566666666 77776655  466788763

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.17  E-value=0.00072  Score=58.73  Aligned_cols=76  Identities=24%  Similarity=0.145  Sum_probs=53.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc-hHHHHHhc--CccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVE--GCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~--~~d~v   84 (331)
                      ...+|||+||+|.||...++.+...|. +|+++++++.......++..     -.++..+ .+. +.+.+...  ++|+|
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga-----~~v~~~~-~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGA-----DIVLPLE-EGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTC-----SEEEESS-TTHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC-----cEEecCc-hhHHHHHHHHhCCCCceEE
Confidence            356899999999999999999999999 99999987766655555411     1223333 221 23334433  58999


Q ss_pred             EEcccC
Q 020110           85 FHVASP   90 (331)
Q Consensus        85 ih~a~~   90 (331)
                      |++++.
T Consensus       232 id~~g~  237 (342)
T 4eye_A          232 VDPIGG  237 (342)
T ss_dssp             EESCC-
T ss_pred             EECCch
Confidence            999874

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.15  E-value=0.00057  Score=58.82  Aligned_cols=68  Identities=15%  Similarity=0.209  Sum_probs=50.8

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      ...+|+|.|+|. |.+|+.+++.|.+.|+ +|++.+|++.....+.+.      ++..       ..+..++++++|+||
T Consensus        28 ~~~~~~I~iIG~-G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~------g~~~-------~~~~~e~~~~aDvVi   92 (320)
T 4dll_A           28 DPYARKITFLGT-GSMGLPMARRLCEAGY-ALQVWNRTPARAASLAAL------GATI-------HEQARAAARDADIVV   92 (320)
T ss_dssp             -CCCSEEEEECC-TTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT------TCEE-------ESSHHHHHTTCSEEE
T ss_pred             ccCCCEEEEECc-cHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC------CCEe-------eCCHHHHHhcCCEEE
Confidence            345679999986 9999999999999999 999999887655544432      2222       234567788899999


Q ss_pred             Ecc
Q 020110           86 HVA   88 (331)
Q Consensus        86 h~a   88 (331)
                      -+.
T Consensus        93 ~~v   95 (320)
T 4dll_A           93 SML   95 (320)
T ss_dssp             ECC
T ss_pred             EEC
Confidence            765

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.13  E-value=0.00052  Score=59.78  Aligned_cols=75  Identities=17%  Similarity=0.150  Sum_probs=53.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchH---HHHHhc--Cc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAVE--GC   81 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~   81 (331)
                      ..++|||+|++|-||..+++.+... |. +|+++++++.......++      +... ..|..+.+.   +.+...  ++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~------g~~~-~~~~~~~~~~~~~~~~~~~~~~  241 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA------GADY-VINASMQDPLAEIRRITESKGV  241 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH------TCSE-EEETTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh------CCCE-EecCCCccHHHHHHHHhcCCCc
Confidence            3568999999989999999999998 99 999998876555444443      1111 135554433   444443  68


Q ss_pred             cEEEEcccC
Q 020110           82 KGVFHVASP   90 (331)
Q Consensus        82 d~vih~a~~   90 (331)
                      |+||++++.
T Consensus       242 d~vi~~~g~  250 (347)
T 1jvb_A          242 DAVIDLNNS  250 (347)
T ss_dssp             EEEEESCCC
T ss_pred             eEEEECCCC
Confidence            999999874

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.13  E-value=0.0014  Score=57.07  Aligned_cols=33  Identities=30%  Similarity=0.442  Sum_probs=28.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFP   43 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~   43 (331)
                      ++|.|.||||.+|+.+++.|.+.. . +|+++.++
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~-ev~~i~~s   42 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMF-ELTALAAS   42 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSE-EEEEEEEC
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCC-EEEEEEcc
Confidence            589999999999999999998765 5 88877653

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.12  E-value=0.0039  Score=53.20  Aligned_cols=110  Identities=14%  Similarity=0.076  Sum_probs=69.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch----hhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      |||.|+|+ |.+|+.++..|+..|. .+|+++++++.....    +.........+.++.-.|  +    .+.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            48999997 9999999999998874 489999887644221    111000000022222111  1    1457899999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      |-+|+....  ......+.++.|+...+.+.+.+.+...+-++.
T Consensus        74 ii~ag~~~k--pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vi  115 (314)
T 3nep_X           74 IITAGLPRS--PGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTII  115 (314)
T ss_dssp             EECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred             EECCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEE
Confidence            999986432  122356788999999999999998886544443

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.10  E-value=0.0032  Score=54.95  Aligned_cols=96  Identities=13%  Similarity=0.123  Sum_probs=54.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CC--CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      |++|.|.||||++|+.|++.|+.+ ++  ..++.+..+... ......   .  +......|..+++.    ++++|+||
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G-~~v~~~---~--g~~i~~~~~~~~~~----~~~~DvVf   70 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG-QAAPSF---G--GTTGTLQDAFDLEA----LKALDIIV   70 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT-SBCCGG---G--TCCCBCEETTCHHH----HHTCSEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCC-CCcccc---C--CCceEEEecCChHH----hcCCCEEE
Confidence            569999999999999999955554 33  255655543211 111101   0  11122233334333    35899999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCcc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSI  132 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~  132 (331)
                      -+.+.                  ..+..+...+.+.|++ .+|=.||.
T Consensus        71 ~a~g~------------------~~s~~~a~~~~~~G~k~vVID~ss~  100 (367)
T 1t4b_A           71 TCQGG------------------DYTNEIYPKLRESGWQGYWIDAASS  100 (367)
T ss_dssp             ECSCH------------------HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             ECCCc------------------hhHHHHHHHHHHCCCCEEEEcCChh
Confidence            88652                  1244566677777875 45555553

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=97.09  E-value=0.0024  Score=55.87  Aligned_cols=69  Identities=12%  Similarity=0.094  Sum_probs=50.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCC-CchHHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-DSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~vih~   87 (331)
                      ||+|+|+|| |..|..++..+.+.|+ +|++++.++.....  .+      --+++..|.. +.+.+....+++|+|+-.
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~-~vv~vd~~~~~~~~--~~------aD~~~~~~~~~d~~~~~~~~~~~D~v~~~   70 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGM-KVVLVDKNPQALIR--NY------ADEFYCFDVIKEPEKLLELSKRVDAVLPV   70 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCTTCTTT--TT------SSEEEECCTTTCHHHHHHHHTSSSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCCCChhH--hh------CCEEEECCCCcCHHHHHHHhcCCCEEEEC
Confidence            789999997 8999999999999999 99999776543221  11      1134455553 556676777889998754

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.09  E-value=0.0005  Score=60.35  Aligned_cols=71  Identities=10%  Similarity=0.098  Sum_probs=51.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC---CccchhhcCCCCCCCcEEEEEccCCC--chHHHHHhcCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---SDSSHLFALPGAGDANLRVFEADVLD--SGAVSRAVEGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~   83 (331)
                      .++|||+|+ |.+|..+++.+...|. +|+++++++   .......++      ++..+  | .+  .+.+.+.-.++|+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~------ga~~v--~-~~~~~~~~~~~~~~~d~  249 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET------KTNYY--N-SSNGYDKLKDSVGKFDV  249 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH------TCEEE--E-CTTCSHHHHHHHCCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh------CCcee--c-hHHHHHHHHHhCCCCCE
Confidence            579999999 9999999999999999 999999877   444444333      34444  4 43  2233331246999


Q ss_pred             EEEcccC
Q 020110           84 VFHVASP   90 (331)
Q Consensus        84 vih~a~~   90 (331)
                      ||++++.
T Consensus       250 vid~~g~  256 (366)
T 2cdc_A          250 IIDATGA  256 (366)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.09  E-value=0.00099  Score=58.46  Aligned_cols=74  Identities=14%  Similarity=0.101  Sum_probs=55.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...+|||+|+ |-||...++.+...|. +|+++++++....... ++      +... ..|..+.+.+.++..++|+||+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~l------Ga~~-v~~~~~~~~~~~~~~~~D~vid  257 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNF------GADS-FLVSRDQEQMQAAAGTLDGIID  257 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTS------CCSE-EEETTCHHHHHHTTTCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc------CCce-EEeccCHHHHHHhhCCCCEEEE
Confidence            3568999996 9999999999999999 9999988766554444 33      2221 2456666666666668999999


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      +++.
T Consensus       258 ~~g~  261 (366)
T 1yqd_A          258 TVSA  261 (366)
T ss_dssp             CCSS
T ss_pred             CCCc
Confidence            9874

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.06  E-value=0.00077  Score=58.78  Aligned_cols=75  Identities=12%  Similarity=0.076  Sum_probs=56.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccC------------------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV------------------L   69 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl------------------~   69 (331)
                      ...+|+|+|+ |-+|...++.|...|. +|++++|++.....+.++      +.+++..|.                  .
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~l------Ga~~~~l~~~~~~~~gya~~~~~~~~~~  254 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSV------GAQWLDLGIDAAGEGGYARELSEAERAQ  254 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHT------TCEECCCC-------------CHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCeEEeccccccccccchhhhhHHHHhh
Confidence            3469999998 9999999999999999 999999987765555554      344443221                  1


Q ss_pred             CchHHHHHhcCccEEEEcccC
Q 020110           70 DSGAVSRAVEGCKGVFHVASP   90 (331)
Q Consensus        70 ~~~~~~~~~~~~d~vih~a~~   90 (331)
                      +.+.+.+++.++|+||.++..
T Consensus       255 ~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          255 QQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHTTCSEEEECCCC
T ss_pred             hHHHHHHHHhcCCEEEECCCC
Confidence            234577888999999987644

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.06  E-value=0.00059  Score=59.41  Aligned_cols=41  Identities=20%  Similarity=0.220  Sum_probs=27.2

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (331)
                      |..|+  ++.+|.|.||||++|+.|++.|.+..+-++..+..+
T Consensus         1 ~~~M~--~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~   41 (359)
T 4dpl_A            1 MILMR--RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK   41 (359)
T ss_dssp             -------CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred             CCcCC--CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence            44453  246899999999999999997766543266666543

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.06  E-value=0.00059  Score=59.41  Aligned_cols=41  Identities=20%  Similarity=0.220  Sum_probs=27.2

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (331)
                      |..|+  ++.+|.|.||||++|+.|++.|.+..+-++..+..+
T Consensus         1 ~~~M~--~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~   41 (359)
T 4dpk_A            1 MILMR--RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK   41 (359)
T ss_dssp             -------CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred             CCcCC--CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence            44453  246899999999999999997766543266666543

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.06  E-value=0.0004  Score=59.21  Aligned_cols=80  Identities=14%  Similarity=0.029  Sum_probs=53.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc---cchhhc-CCCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~---~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      +.+++||+|+ |..|+.++..|.+.|..+|++..|+...   ...+.+ +....  +......++.+.+.+.+.+.++|+
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~--~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT--DCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS--SCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc--CcceEEechHhhhhhHhhccCceE
Confidence            4679999997 8899999999999997689999998433   222211 10000  222333455554344566778999


Q ss_pred             EEEcccC
Q 020110           84 VFHVASP   90 (331)
Q Consensus        84 vih~a~~   90 (331)
                      ||++.+.
T Consensus       224 IINaTp~  230 (312)
T 3t4e_A          224 LTNGTKV  230 (312)
T ss_dssp             EEECSST
T ss_pred             EEECCcC
Confidence            9998754

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.05  E-value=0.00038  Score=59.64  Aligned_cols=40  Identities=15%  Similarity=0.170  Sum_probs=33.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~   50 (331)
                      ||+|.|+|+ |.+|+.++..|.+.|+ +|++++|++.....+
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~   42 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAI   42 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCC-cEEEEECCHHHHHHH
Confidence            569999997 9999999999999999 999999876544443

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.04  E-value=0.00057  Score=58.07  Aligned_cols=77  Identities=12%  Similarity=0.062  Sum_probs=53.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|+|+|+ |.+|+.++..|.+.|..+|++..|+......+.+...... .      +..+.+++.+.+.++|+||++
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~-~------~~~~~~~~~~~~~~aDivIn~  211 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR-S------AYFSLAEAETRLAEYDIIINT  211 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS-C------CEECHHHHHHTGGGCSEEEEC
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc-C------ceeeHHHHHhhhccCCEEEEC
Confidence            4579999998 7799999999999996589999988655444432211100 0      111224566777889999999


Q ss_pred             ccCCC
Q 020110           88 ASPCT   92 (331)
Q Consensus        88 a~~~~   92 (331)
                      .+...
T Consensus       212 t~~~~  216 (297)
T 2egg_A          212 TSVGM  216 (297)
T ss_dssp             SCTTC
T ss_pred             CCCCC
Confidence            87543

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.04  E-value=0.00086  Score=57.36  Aligned_cols=110  Identities=14%  Similarity=0.075  Sum_probs=68.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC--CCCEEEEEecCCCccchhhc-CCCC---CCCcEEEEEccCCCchHHHHHhcCccE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFA-LPGA---GDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      |+|.|+|+ |.+|+.++..|.+.  |+ +|+++++++........ +...   .....++...  .|.   .+ ++++|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~-~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~-l~~aDv   72 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLAR-ELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD-TANSDI   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCS-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG-GTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-EEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH-HCCCCE
Confidence            48999998 99999999999985  68 99999998654332210 0000   0001111110  122   23 788999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEe
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVT  129 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~  129 (331)
                      ||-+++....  ......+.+..|......+.+.+.+...+ .+|.+
T Consensus        73 Viiav~~p~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~  117 (310)
T 1guz_A           73 VIITAGLPRK--PGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV  117 (310)
T ss_dssp             EEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred             EEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence            9999874321  11224567788888888898888776433 34444

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.03  E-value=0.0025  Score=56.10  Aligned_cols=69  Identities=12%  Similarity=0.106  Sum_probs=52.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ||+|+|+|+ |.+|+.+++.|.+.|+ +|++++.++.....  ..      .-.++..|..|.+.+.++++++|.|+..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~-~v~~~~~~~~~~~~--~~------~~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGF-YVIVLDPTPRSPAG--QV------ADEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSTTCTTG--GG------SSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCCCCchh--hh------CceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            579999998 8999999999999999 99988765433211  11      1135668899999888888889998853

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.03  E-value=0.0073  Score=52.54  Aligned_cols=94  Identities=24%  Similarity=0.265  Sum_probs=54.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCC--EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ++|.|.||||++|+.|++.|.+.++.  ++..+....+.-..+. +..  . ...+...|   ++    .++++|+||-+
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-~~~--~-~~~~~~~~---~~----~~~~~Dvvf~a   71 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKD--Q-DITIEETT---ET----AFEGVDIALFS   71 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-ETT--E-EEEEEECC---TT----TTTTCSEEEEC
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-ecC--C-CceEeeCC---HH----HhcCCCEEEEC
Confidence            58999999999999999988886542  4444442222111111 100  0 22222222   11    24689999988


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccc
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~  133 (331)
                      .+..                  .+..++..+.+.|+ ++|=.|+.+
T Consensus        72 ~~~~------------------~s~~~a~~~~~~G~-~vIDlSa~~   98 (366)
T 3pwk_A           72 AGSS------------------TSAKYAPYAVKAGV-VVVDNTSYF   98 (366)
T ss_dssp             SCHH------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             CChH------------------hHHHHHHHHHHCCC-EEEEcCCcc
Confidence            6521                  23456666667776 577778754

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.02  E-value=0.0013  Score=56.62  Aligned_cols=166  Identities=13%  Similarity=0.078  Sum_probs=91.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCC-----CCCCcEEEEEccCCCchHHHHHhcCcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG-----AGDANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      +++|.|+|| |.+|+.++..|...|+-+|++.++++....... .+..     ....++... .|      . +.++++|
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~aD   84 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EYLQNSD   84 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HHHCCCC
Confidence            358999998 999999999999998635999988764433211 0000     000022221 22      2 4578999


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEE-EEeCccceeccCCCCCCccccCCCCCChhhhhccC
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV-VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (331)
                      +||-.++.......  ...+....|......+.+.+.+...+.+ |.+|-....-  .    .........      ++.
T Consensus        85 ~VI~avg~p~k~g~--tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~--t----~~~~~~~~~------~~~  150 (328)
T 2hjr_A           85 VVIITAGVPRKPNM--TRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDAM--V----YYFKEKSGI------PAN  150 (328)
T ss_dssp             EEEECCSCCCCTTC--CSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHH--H----HHHHHHHCC------CGG
T ss_pred             EEEEcCCCCCCCCC--chhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHHH--H----HHHHHhcCC------Chh
Confidence            99999875432111  1235677888888888888776644433 4433211100  0    000000000      112


Q ss_pred             cchhH-HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Q 020110          162 KWYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (331)
Q Consensus       162 ~~y~~-sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~  198 (331)
                      ...|. +-+..-++....++..|++..-++ ..++|.+
T Consensus       151 rviG~~t~Ld~~R~~~~la~~lgv~~~~v~-~~v~G~H  187 (328)
T 2hjr_A          151 KVCGMSGVLDSARFRCNLSRALGVKPSDVS-AIVVGGH  187 (328)
T ss_dssp             GEEESCHHHHHHHHHHHHHHHHTSCGGGEE-CCEEBCS
T ss_pred             hEEEeCcHHHHHHHHHHHHHHhCCCHHHee-EEEecCC
Confidence            24444 455555555555556676555555 3578865

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.02  E-value=0.0029  Score=57.22  Aligned_cols=100  Identities=21%  Similarity=0.292  Sum_probs=72.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih   86 (331)
                      ..++|+|.|| |-+|.++++.| ++++ +|..+.++......+.+...    +..++.||.+|++-+.+. ++++|++|-
T Consensus       234 ~~~~v~I~Gg-G~ig~~lA~~L-~~~~-~v~iIE~d~~r~~~la~~l~----~~~Vi~GD~td~~~L~ee~i~~~D~~ia  306 (461)
T 4g65_A          234 PYRRIMIVGG-GNIGASLAKRL-EQTY-SVKLIERNLQRAEKLSEELE----NTIVFCGDAADQELLTEENIDQVDVFIA  306 (461)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHH-TTTS-EEEEEESCHHHHHHHHHHCT----TSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred             cccEEEEEcc-hHHHHHHHHHh-hhcC-ceEEEecCHHHHHHHHHHCC----CceEEeccccchhhHhhcCchhhcEEEE
Confidence            3578999998 99999999987 5568 99999888776666554333    678999999999877654 678999995


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      +.+         +.    +.|+...    -.|++.|+++.|-.-.
T Consensus       307 ~T~---------~D----e~Ni~~~----llAk~~gv~kvIa~vn  334 (461)
T 4g65_A          307 LTN---------ED----ETNIMSA----MLAKRMGAKKVMVLIQ  334 (461)
T ss_dssp             CCS---------CH----HHHHHHH----HHHHHTTCSEEEEECS
T ss_pred             ccc---------Cc----HHHHHHH----HHHHHcCCcccccccc
Confidence            432         11    3444433    3567789998776443

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.01  E-value=0.0032  Score=53.77  Aligned_cols=111  Identities=14%  Similarity=0.076  Sum_probs=68.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCCccchhhc-CC---CCCCCcEEEEEccCCCchHHHHHhcCcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFA-LP---GAGDANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~-~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      ||+|.|+| +|.+|+.++..|.+.|  + +|++++|++........ +.   ...+..++....|   .    +.++++|
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~-~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d---~----~~~~~aD   71 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVAD-DYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADAD   71 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCS-EEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCC-EEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCC---H----HHhCCCC
Confidence            46899999 5999999999999999  7 99999987543322211 00   0000023332222   2    3568899


Q ss_pred             EEEEcccCCCC--CCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           83 GVFHVASPCTL--EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        83 ~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      +||-+++....  +.......+....|......+++.+.+...+.+|.
T Consensus        72 vViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii  119 (309)
T 1hyh_A           72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLV  119 (309)
T ss_dssp             EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred             EEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEE
Confidence            99998875331  00011234567788888888888887764443433

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.01  E-value=0.0015  Score=58.34  Aligned_cols=69  Identities=16%  Similarity=0.163  Sum_probs=53.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .+++|+|+|+ |.+|+.+++.+.+.|+ +|++++.++.....  ..      --+.+..|..|.+.+.++++++|+|+.
T Consensus        34 ~~~~IlIlG~-G~lg~~~~~aa~~lG~-~v~v~d~~~~~p~~--~~------ad~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           34 PGAWLGMVGG-GQLGRMFCFAAQSMGY-RVAVLDPDPASPAG--AV------ADRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCTTCHHH--HH------SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEECCCCcCchh--hh------CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            3569999997 8999999999999999 99988654432211  11      123566899999999999988999883

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.00  E-value=0.0038  Score=51.15  Aligned_cols=71  Identities=25%  Similarity=0.292  Sum_probs=45.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-----CccE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCKG   83 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~   83 (331)
                      +||.|+|++|-+|+.+++.+.+. ++ ++++......+...+...      +.. +..|.+.++...+.+.     +++.
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~-elva~~d~~~dl~~~~~~------~~D-vvIDfT~p~a~~~~~~~a~~~g~~~   72 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDL-TLSAELDAGDPLSLLTDG------NTE-VVIDFTHPDVVMGNLEFLIDNGIHA   72 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTC-EEEEEECTTCCTHHHHHT------TCC-EEEECSCTTTHHHHHHHHHHTTCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEccCCCHHHHhcc------CCc-EEEEccChHHHHHHHHHHHHcCCCE
Confidence            38999999999999999999876 78 887665433222222111      122 4567777766554432     4566


Q ss_pred             EEEcc
Q 020110           84 VFHVA   88 (331)
Q Consensus        84 vih~a   88 (331)
                      |+-..
T Consensus        73 VigTT   77 (245)
T 1p9l_A           73 VVGTT   77 (245)
T ss_dssp             EECCC
T ss_pred             EEcCC
Confidence            66443

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.00  E-value=0.0091  Score=51.97  Aligned_cols=174  Identities=16%  Similarity=0.065  Sum_probs=93.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-CE---EEEEecCCCcc-----chhhcCCCCCCCcEEEEEccCCCchHHHHHhc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY-TS---INATVFPGSDS-----SHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~~---V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      .+||.|+||+|.||.+++-.|+..+. .+   |.....+....     ....++......-...+..  .  ..-.+.++
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i--~--~~~y~~~~  107 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI--G--IDPYEVFE  107 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--E--SCHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEE--e--cCCHHHhC
Confidence            35899999999999999999998763 22   55543332221     1111111100001111111  1  12346789


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCC-EEEEeCccceeccCCCCCCccccCCCCCChhhh
Q 020110           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~-~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (331)
                      ++|+||-.||....  ......+.++.|+.-.+.+.+.+.+. +.+ .++.+|-..-+.-  .   -.........+   
T Consensus       108 daDvVVitag~prk--pG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t--~---ia~k~sg~~~~---  177 (375)
T 7mdh_A          108 DVDWALLIGAKPRG--PGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNA--L---ICLKNAPDIPA---  177 (375)
T ss_dssp             TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH--H---HHHHTCTTSCG---
T ss_pred             CCCEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHH--H---HHHHHcCCCCc---
Confidence            99999999886432  23446788999999999999988774 433 4455442100000  0   00000000000   


Q ss_pred             hccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCC
Q 020110          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~  199 (331)
                         ...-+.+.+..-++-...+++.+++...++--.|+|.+.
T Consensus       178 ---rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHg  216 (375)
T 7mdh_A          178 ---KNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHS  216 (375)
T ss_dssp             ---GGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSS
T ss_pred             ---cEEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecCC
Confidence               112344555555665556667787655555446788764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.00  E-value=0.0011  Score=55.55  Aligned_cols=70  Identities=10%  Similarity=0.094  Sum_probs=50.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.++++|+|+ |-+|+.++..|.+.|..+|++..|+..+...+..       .+..+     ..+++.+.+.++|+||++
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-------~~~~~-----~~~~~~~~~~~aDiVIna  182 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-------NINKI-----NLSHAESHLDEFDIIINT  182 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-------CCEEE-----CHHHHHHTGGGCSEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-------hcccc-----cHhhHHHHhcCCCEEEEC
Confidence            3579999997 8899999999999997679989888655443322       22222     234566677889999998


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ...
T Consensus       183 Tp~  185 (277)
T 3don_A          183 TPA  185 (277)
T ss_dssp             CC-
T ss_pred             ccC
Confidence            654

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.00  E-value=0.00051  Score=58.70  Aligned_cols=68  Identities=21%  Similarity=0.216  Sum_probs=49.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ..+++|.|+|. |.+|+.+++.|.+.|+ +|++.+|++.....+.+.      ++..       ..+..++++++|+||-
T Consensus         7 ~~~~~IgiIG~-G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~~-------~~~~~e~~~~aDvVi~   71 (306)
T 3l6d_A            7 SFEFDVSVIGL-GAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAA------GAHL-------CESVKAALSASPATIF   71 (306)
T ss_dssp             CCSCSEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHH------TCEE-------CSSHHHHHHHSSEEEE
T ss_pred             cCCCeEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC------CCee-------cCCHHHHHhcCCEEEE
Confidence            34678999985 9999999999999999 999999887655444332      2221       2345566778999997


Q ss_pred             ccc
Q 020110           87 VAS   89 (331)
Q Consensus        87 ~a~   89 (331)
                      +..
T Consensus        72 ~vp   74 (306)
T 3l6d_A           72 VLL   74 (306)
T ss_dssp             CCS
T ss_pred             EeC
Confidence            653

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.99  E-value=0.00029  Score=59.35  Aligned_cols=79  Identities=15%  Similarity=0.224  Sum_probs=52.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.++++|+|+ |.+|+.++..|.+.|..+|++..|+..+...+.+........+.+...++   +++.+.+.++|.||++
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiVIna  201 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAAADGVVNA  201 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEEEEC
Confidence            4679999998 89999999999999975799999986654433221100000122222333   3466677789999998


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ...
T Consensus       202 Tp~  204 (283)
T 3jyo_A          202 TPM  204 (283)
T ss_dssp             SST
T ss_pred             CCC
Confidence            754

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.98  E-value=0.0016  Score=55.97  Aligned_cols=168  Identities=10%  Similarity=0.088  Sum_probs=91.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCC-----CCCCcEEEEEccCCCchHHHHHhcCcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG-----AGDANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      ++||.|+|+ |.+|..++..|...|+-+|.++++++....... .+..     ....++... .|      . +.++++|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~aD   74 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NT------Y-DDLAGAD   74 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CC------G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CC------H-HHhCCCC
Confidence            469999998 999999999999998635888887764332111 0000     000022211 22      2 4578999


Q ss_pred             EEEEcccCCCCCCCC---CchhhhhHHHHHHHHHHHHHHHhCCCCE-EEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           83 GVFHVASPCTLEDPV---DPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        83 ~vih~a~~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      +||-+++........   ....+....|......+.+.+.+...+. +|.+|-....-  .    .........      
T Consensus        75 ~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~--t----~~~~~~~g~------  142 (322)
T 1t2d_A           75 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVM--V----QLLHQHSGV------  142 (322)
T ss_dssp             EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHH--H----HHHHHHHCC------
T ss_pred             EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHH--H----HHHHHhcCC------
Confidence            999998754321110   0135567888888888888877765443 44433211100  0    000000000      


Q ss_pred             ccCcchhH-HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Q 020110          159 SRKKWYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (331)
Q Consensus       159 ~~~~~y~~-sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~  198 (331)
                      .+....|. +-+..-++....++..+++..-++. .++|.+
T Consensus       143 ~~~rviG~gt~ld~~R~~~~la~~lgv~~~~v~~-~v~G~H  182 (322)
T 1t2d_A          143 PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNA-HIVGAH  182 (322)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEEC-CEEBCS
T ss_pred             ChHHEEeccCcccHHHHHHHHHHHhCCCHHHeEE-EEEcCC
Confidence            11124454 5555555555556666765555554 477864

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.98  E-value=0.0065  Score=50.14  Aligned_cols=103  Identities=16%  Similarity=0.103  Sum_probs=65.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--------------------C-CCCcEEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--------------------A-GDANLRVFEAD   67 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--------------------~-~~~~~~~~~~D   67 (331)
                      .++|+|.|+ |-+|+++++.|...|..++++++++.-...++.+..-                    . ...+++.+..+
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  106 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQR  106 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            469999998 6699999999999997788888776543333322210                    0 01134555445


Q ss_pred             CCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           68 VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        68 l~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      +. .+.+.++++++|+||.+...         ..        .-..+.++|.+.+++ +|+.+.
T Consensus       107 ~~-~~~~~~~~~~~DvVi~~~d~---------~~--------~r~~l~~~~~~~~~p-~i~~~~  151 (251)
T 1zud_1          107 LT-GEALKDAVARADVVLDCTDN---------MA--------TRQEINAACVALNTP-LITASA  151 (251)
T ss_dssp             CC-HHHHHHHHHHCSEEEECCSS---------HH--------HHHHHHHHHHHTTCC-EEEEEE
T ss_pred             CC-HHHHHHHHhcCCEEEECCCC---------HH--------HHHHHHHHHHHhCCC-EEEEec
Confidence            53 35567778889999986431         11        123466677777754 777554

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.97  E-value=0.0017  Score=57.06  Aligned_cols=76  Identities=16%  Similarity=0.140  Sum_probs=56.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEcc----------------CCC-
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD----------------VLD-   70 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D----------------l~~-   70 (331)
                      ...+|+|+|+ |-+|...++.+...|. +|+++++++........+      +.+++..+                +++ 
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~------G~~~~~~~~~~~~d~~~~~~ya~e~s~~  260 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGA-VVSATDVRPAAKEQVASL------GAKFIAVEDEEFKAAETAGGYAKEMSGE  260 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHT------TCEECCCCC-----------------CH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc------CCceeecccccccccccccchhhhcchh
Confidence            3469999998 9999999999999999 999999987765555543      33333322                122 


Q ss_pred             -----chHHHHHhcCccEEEEcccCC
Q 020110           71 -----SGAVSRAVEGCKGVFHVASPC   91 (331)
Q Consensus        71 -----~~~~~~~~~~~d~vih~a~~~   91 (331)
                           .+.+.+++.++|+||.++...
T Consensus       261 ~~~~~~~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          261 YQVKQAALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             HHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred             hhhhhHhHHHHHhcCCCEEEECCcCC
Confidence                 246778889999999987544

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.96  E-value=0.0032  Score=55.63  Aligned_cols=68  Identities=16%  Similarity=0.112  Sum_probs=52.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .+++|+|+|+ |.+|+.+++.+.+.|+ +|++++.++.....  ..      --..+..|..|.+.+.++++++|+|.
T Consensus        13 ~~k~IlIlG~-G~~g~~la~aa~~~G~-~vi~~d~~~~~~~~--~~------ad~~~~~~~~d~~~l~~~~~~~dvI~   80 (389)
T 3q2o_A           13 PGKTIGIIGG-GQLGRMMALAAKEMGY-KIAVLDPTKNSPCA--QV------ADIEIVASYDDLKAIQHLAEISDVVT   80 (389)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSTTCTTT--TT------CSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCCCCchH--Hh------CCceEecCcCCHHHHHHHHHhCCEee
Confidence            4579999997 8899999999999999 99999765432211  11      11345688899999999999999874

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.96  E-value=0.0076  Score=50.68  Aligned_cols=104  Identities=11%  Similarity=0.111  Sum_probs=64.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC-------------------C-CCCcEEEEEcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-------------------A-GDANLRVFEAD   67 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-------------------~-~~~~~~~~~~D   67 (331)
                      ...+|+|.|+ |-+|+++++.|...|..++++++.+.-+..++.+...                   . ...+++.+..+
T Consensus        35 ~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~  113 (292)
T 3h8v_A           35 RTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYN  113 (292)
T ss_dssp             GGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred             hCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEeccc
Confidence            3469999997 8999999999999997789998876533333322110                   0 01145666667


Q ss_pred             CCCchHHHHHh-----------cCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           68 VLDSGAVSRAV-----------EGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        68 l~~~~~~~~~~-----------~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      +.+.+.+..++           +++|+||.+...                 +..-..+.++|.+.+++ +|+.+
T Consensus       114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn-----------------~~~R~~in~~c~~~~~P-li~~g  169 (292)
T 3h8v_A          114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN-----------------FEARMTINTACNELGQT-WMESG  169 (292)
T ss_dssp             TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS-----------------HHHHHHHHHHHHHHTCC-EEEEE
T ss_pred             CCcHHHHHHHhhhhcccccccCCCCCEEEECCcc-----------------hhhhhHHHHHHHHhCCC-EEEee
Confidence            76555555554           578999976421                 11223466678777764 77644

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.96  E-value=0.0008  Score=58.48  Aligned_cols=73  Identities=19%  Similarity=0.244  Sum_probs=49.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc-hHHHHHhc--CccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVE--GCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~--~~d~v   84 (331)
                      ...+|||+||+|.+|...++.+...|. +|+++ +++.......++      ++..+. +-.+. +.+.+...  ++|+|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~l------Ga~~i~-~~~~~~~~~~~~~~~~g~D~v  220 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDL------GATPID-ASREPEDYAAEHTAGQGFDLV  220 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHH------TSEEEE-TTSCHHHHHHHHHTTSCEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHc------CCCEec-cCCCHHHHHHHHhcCCCceEE
Confidence            346899999999999999999999999 99988 655544444443      333333 21121 22333332  58999


Q ss_pred             EEccc
Q 020110           85 FHVAS   89 (331)
Q Consensus        85 ih~a~   89 (331)
                      |++++
T Consensus       221 id~~g  225 (343)
T 3gaz_A          221 YDTLG  225 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99887

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.96  E-value=0.00088  Score=58.35  Aligned_cols=73  Identities=7%  Similarity=0.042  Sum_probs=52.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch---HHHHHh--cCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAV--EGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~--~~~d~v   84 (331)
                      ++|+|+||+|.||...++.+...|. +|+++++++.....+.++      +... ..|..+.+   .+.+..  .++|+|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~------Ga~~-~~~~~~~~~~~~v~~~~~~~g~D~v  237 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDI------GAAH-VLNEKAPDFEATLREVMKAEQPRIF  237 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHH------TCSE-EEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCCE-EEECCcHHHHHHHHHHhcCCCCcEE
Confidence            6899999999999999999999999 999999877666555544      2211 13443332   233333  369999


Q ss_pred             EEcccC
Q 020110           85 FHVASP   90 (331)
Q Consensus        85 ih~a~~   90 (331)
                      |++++.
T Consensus       238 id~~g~  243 (349)
T 3pi7_A          238 LDAVTG  243 (349)
T ss_dssp             EESSCH
T ss_pred             EECCCC
Confidence            999873

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.96  E-value=0.0069  Score=51.88  Aligned_cols=112  Identities=13%  Similarity=0.006  Sum_probs=72.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch----hhcC-CCCCCCcEEEEEccCCCchHHHHHhcCc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFAL-PGAGDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      .+++|.|+|+ |.+|+.++..|+..|. .+|++++++......    +... ......++ ....|+.       .++++
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i-~~t~d~~-------~~~da   90 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKI-VSGKDYS-------VSAGS   90 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEE-EEESSSC-------SCSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeE-EEcCCHH-------HhCCC
Confidence            4579999998 9999999999999884 489998875432211    0100 00000022 1123432       27899


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCE-EEEeC
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S  130 (331)
                      |+||-.||....  ......+.+..|+.....+.+.+.+...+. ++.+|
T Consensus        91 DiVIitaG~p~k--pG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           91 KLVVITAGARQQ--EGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             SEEEECCSCCCC--SSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            999999986543  223356788999999999999888775444 44444

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.95  E-value=0.0094  Score=51.79  Aligned_cols=103  Identities=13%  Similarity=0.021  Sum_probs=68.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC---------------------CCCCcEEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG---------------------AGDANLRVFEAD   67 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---------------------~~~~~~~~~~~D   67 (331)
                      .++|+|.|+ |-+|+++++.|...|..++++++++.-+..++.+..-                     ....+++.+..+
T Consensus       118 ~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~  196 (353)
T 3h5n_A          118 NAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALN  196 (353)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecc
Confidence            468999998 8899999999999997789999887655444443210                     011156677777


Q ss_pred             CCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           68 VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        68 l~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      +....++.. ++++|+||.+...         ...       ....+.++|.+.+++ +|+.+
T Consensus       197 i~~~~~~~~-~~~~DlVvd~~Dn---------~~~-------~r~~ln~~c~~~~~p-~i~~~  241 (353)
T 3h5n_A          197 INDYTDLHK-VPEADIWVVSADH---------PFN-------LINWVNKYCVRANQP-YINAG  241 (353)
T ss_dssp             CCSGGGGGG-SCCCSEEEECCCC---------STT-------HHHHHHHHHHHTTCC-EEEEE
T ss_pred             cCchhhhhH-hccCCEEEEecCC---------hHH-------HHHHHHHHHHHhCCC-EEEEE
Confidence            766554555 8889999986521         110       112455678888864 66644

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.94  E-value=0.00079  Score=58.39  Aligned_cols=74  Identities=16%  Similarity=0.115  Sum_probs=52.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch---HHHHHhcCccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVEGCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~d~v   84 (331)
                      ..++|||+|+ |.+|..+++.+...|. +|++++|++.......++      ++.. ..|..+.+   .+.+...++|+|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~-~~d~~~~~~~~~~~~~~~~~d~v  234 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKEL------GADL-VVNPLKEDAAKFMKEKVGGVHAA  234 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCSE-EECTTTSCHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHC------CCCE-EecCCCccHHHHHHHHhCCCCEE
Confidence            3569999999 6699999999999999 999999876665555544      2222 24655432   233333579999


Q ss_pred             EEcccC
Q 020110           85 FHVASP   90 (331)
Q Consensus        85 ih~a~~   90 (331)
                      |++++.
T Consensus       235 id~~g~  240 (339)
T 1rjw_A          235 VVTAVS  240 (339)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            998873

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.94  E-value=0.0022  Score=57.05  Aligned_cols=69  Identities=19%  Similarity=0.242  Sum_probs=53.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      +++|+|+|+ |.+|+.+++.+.+.|+ +|++++ ++.....  ....    ....+.+|..|.+.+.++++.+|+|+.
T Consensus        24 ~~~I~ilGg-G~lg~~l~~aa~~lG~-~v~~~d-~~~~p~~--~~ad----~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           24 SRKVGVLGG-GQLGRMLVESANRLNI-QVNVLD-ADNSPAK--QISA----HDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEE-STTCTTG--GGCC----SSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEE-CCCCcHH--Hhcc----ccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            469999998 8999999999999999 999998 5322211  1111    123567899999999999999998874

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.92  E-value=0.00068  Score=59.66  Aligned_cols=76  Identities=16%  Similarity=0.027  Sum_probs=55.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...++|+|+|+ |-||+.+++.+...|. +|++.+|++.....+.+..+.   .+   ..+..+.+++.+++.++|+||.
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~---~~---~~~~~~~~~l~~~l~~aDvVi~  237 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCG---RI---HTRYSSAYELEGAVKRADLVIG  237 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT---SS---EEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCC---ee---EeccCCHHHHHHHHcCCCEEEE
Confidence            34579999998 9999999999999999 999999876554433331111   21   1233445667778888999999


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      +++.
T Consensus       238 ~~~~  241 (377)
T 2vhw_A          238 AVLV  241 (377)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            8764

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.91  E-value=0.0023  Score=54.85  Aligned_cols=108  Identities=7%  Similarity=0.099  Sum_probs=67.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch-hh---cCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LF---ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~-~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      +||.|+|+ |.+|..++..|+..+. .+|..++++...... ..   ....... ++++.. |  +    .+.++++|+|
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~-~~~v~~-~--~----~~a~~~aDvV   76 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTA-PKKIYS-G--E----YSDCKDADLV   76 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSC-CCEEEE-C--C----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcC-CeEEEE-C--C----HHHhCCCCEE
Confidence            59999998 9999999999998773 478888875432221 11   1000001 333332 2  2    2358899999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      |..++.....  .....+....|+.....+.+.+.+...+-+|.
T Consensus        77 ii~ag~~~~~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~ii  118 (318)
T 1ez4_A           77 VITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFL  118 (318)
T ss_dssp             EECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred             EECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence            9999864321  12235678899999999999998886544333

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.88  E-value=0.0026  Score=55.91  Aligned_cols=74  Identities=14%  Similarity=0.126  Sum_probs=50.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh--cCccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--EGCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~vi   85 (331)
                      ...+|||+||+|-+|...++.+...|. +|+++.+ +.....+.++      +...+ .|..+.+..+++.  .++|+||
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~~-~~~~~~~~~l------Ga~~v-~~~~~~~~~~~~~~~~g~D~vi  253 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVCS-QDASELVRKL------GADDV-IDYKSGSVEEQLKSLKPFDFIL  253 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC-GGGHHHHHHT------TCSEE-EETTSSCHHHHHHTSCCBSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEeC-hHHHHHHHHc------CCCEE-EECCchHHHHHHhhcCCCCEEE
Confidence            356999999999999999999999999 9998874 3333334333      22211 3444433333332  4699999


Q ss_pred             EcccC
Q 020110           86 HVASP   90 (331)
Q Consensus        86 h~a~~   90 (331)
                      ++++.
T Consensus       254 d~~g~  258 (375)
T 2vn8_A          254 DNVGG  258 (375)
T ss_dssp             ESSCT
T ss_pred             ECCCC
Confidence            99874

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.88  E-value=0.0056  Score=45.41  Aligned_cols=86  Identities=16%  Similarity=0.235  Sum_probs=55.0

Q ss_pred             CCeEEEeCcc---hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGAN---GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGat---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .++|.|.|++   |.+|..+++.|++.|+ +|+..+++...   .   .     ++..       ..++.++.+.+|.++
T Consensus        14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~-~V~~vnp~~~~---i---~-----G~~~-------~~s~~el~~~vDlvi   74 (138)
T 1y81_A           14 FRKIALVGASKNPAKYGNIILKDLLSKGF-EVLPVNPNYDE---I---E-----GLKC-------YRSVRELPKDVDVIV   74 (138)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECTTCSE---E---T-----TEEC-------BSSGGGSCTTCCEEE
T ss_pred             CCeEEEEeecCCCCCHHHHHHHHHHHCCC-EEEEeCCCCCe---E---C-----Ceee-------cCCHHHhCCCCCEEE
Confidence            4689999997   9999999999999999 88876443211   1   0     2221       122333445789888


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      -+..          +.        ....+++.+.+.+++.++..+|
T Consensus        75 i~vp----------~~--------~v~~v~~~~~~~g~~~i~~~~~  102 (138)
T 1y81_A           75 FVVP----------PK--------VGLQVAKEAVEAGFKKLWFQPG  102 (138)
T ss_dssp             ECSC----------HH--------HHHHHHHHHHHTTCCEEEECTT
T ss_pred             EEeC----------HH--------HHHHHHHHHHHcCCCEEEEcCc
Confidence            6542          11        1334566566678887777554

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.87  E-value=0.0021  Score=54.64  Aligned_cols=71  Identities=13%  Similarity=0.176  Sum_probs=52.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...++|+|+|+ |-+|+.+++.|...|. +|++.+|+......+.+.      +++.+.     ..++.++++++|+|+.
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~------g~~~~~-----~~~l~~~l~~aDvVi~  221 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGA-NVKVGARSSAHLARITEM------GLVPFH-----TDELKEHVKDIDICIN  221 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCEEEE-----GGGHHHHSTTCSEEEE
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHC------CCeEEc-----hhhHHHHhhCCCEEEE
Confidence            34679999996 9999999999999999 999999876443333222      333321     2457778899999998


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      +...
T Consensus       222 ~~p~  225 (300)
T 2rir_A          222 TIPS  225 (300)
T ss_dssp             CCSS
T ss_pred             CCCh
Confidence            8764

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.87  E-value=0.0013  Score=56.82  Aligned_cols=169  Identities=17%  Similarity=0.059  Sum_probs=99.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC------CEEEEEecCCCcc--c----hhhcCCCCCCCcEEEEEccCCCchHHHHH
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY------TSINATVFPGSDS--S----HLFALPGAGDANLRVFEADVLDSGAVSRA   77 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~------~~V~~~~r~~~~~--~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   77 (331)
                      .||.|+||+|.||++|+-.|.....      .++..++..+...  .    .+.......  ....+.++     ...+.
T Consensus        25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~--~~~~~~~~-----~~~~a   97 (345)
T 4h7p_A           25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPL--LDKVVVTA-----DPRVA   97 (345)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTT--EEEEEEES-----CHHHH
T ss_pred             CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccC--CCcEEEcC-----ChHHH
Confidence            4899999999999999998876532      1577776543211  0    111111000  12222221     23467


Q ss_pred             hcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC-CC-EEEEeCccceeccCCCCCCccc-cC-C-CCC
Q 020110           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR-RVVVTSSISAIVPNPGWKGKVF-DE-T-SWT  152 (331)
Q Consensus        78 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~SS~~~~~~~~~~~~~~~-~E-~-~~~  152 (331)
                      ++++|+||-.||..--  ......+.++.|..-.+.+.+.+.+.. .. +++.+|-..-..       .++ -+ . ...
T Consensus        98 ~~~advVvi~aG~prk--pGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~-------~~i~~~~~~g~~  168 (345)
T 4h7p_A           98 FDGVAIAIMCGAFPRK--AGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTN-------ALILLKSAQGKL  168 (345)
T ss_dssp             TTTCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH-------HHHHHHHTTTCS
T ss_pred             hCCCCEEEECCCCCCC--CCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchH-------HHHHHHHccCCC
Confidence            8999999999986542  233467889999999999999987653 23 344544210000       000 00 0 001


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~  200 (331)
                      .+      ...-+.+.+..-++-...+++.+++...++-..|.|.+..
T Consensus       169 ~~------r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~  210 (345)
T 4h7p_A          169 NP------RHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSS  210 (345)
T ss_dssp             CG------GGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSST
T ss_pred             Cc------ceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCC
Confidence            11      1245566666666666667778888777776667787643

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.87  E-value=0.00063  Score=55.09  Aligned_cols=66  Identities=14%  Similarity=0.035  Sum_probs=45.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEE-EecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ||+|.|+| +|.+|+.+++.|.+.|+ +|++ .+|++.....+.+..     ++....   .    ..+.++++|+||-+
T Consensus        23 mmkI~IIG-~G~mG~~la~~l~~~g~-~V~~v~~r~~~~~~~l~~~~-----g~~~~~---~----~~~~~~~aDvVila   88 (220)
T 4huj_A           23 MTTYAIIG-AGAIGSALAERFTAAQI-PAIIANSRGPASLSSVTDRF-----GASVKA---V----ELKDALQADVVILA   88 (220)
T ss_dssp             SCCEEEEE-CHHHHHHHHHHHHHTTC-CEEEECTTCGGGGHHHHHHH-----TTTEEE---C----CHHHHTTSSEEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-EEEEEECCCHHHHHHHHHHh-----CCCccc---C----hHHHHhcCCEEEEe
Confidence            67999999 69999999999999999 8888 777766554433211     111111   1    12346789999976


Q ss_pred             c
Q 020110           88 A   88 (331)
Q Consensus        88 a   88 (331)
                      .
T Consensus        89 v   89 (220)
T 4huj_A           89 V   89 (220)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.86  E-value=0.0067  Score=51.60  Aligned_cols=108  Identities=14%  Similarity=0.123  Sum_probs=63.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch-hhcCCCCC--CCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPGAG--DANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      |||.|+|+ |.+|+.++..|...|+ .+|+++++++..... ...+....  ....++...   +.    +.++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~---~~----~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHG---GH----SELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEE---CG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEEC---CH----HHhCCCCEEE
Confidence            48999998 9999999999999884 479999887532211 11111000  002222221   22    3578999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEE
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV  127 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  127 (331)
                      .+++.....  .....+....|......+++.+.+...+.+|
T Consensus        73 i~~~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~v  112 (304)
T 2v6b_A           73 LTAGANQKP--GESRLDLLEKNADIFRELVPQITRAAPDAVL  112 (304)
T ss_dssp             ECC--------------CHHHHHHHHHHHHHHHHHHCSSSEE
T ss_pred             EcCCCCCCC--CCcHHHHHHhHHHHHHHHHHHHHHhCCCeEE
Confidence            998754321  1223457788999889998888776544343

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.86  E-value=0.0088  Score=52.08  Aligned_cols=66  Identities=11%  Similarity=0.085  Sum_probs=46.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc---cEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC---KGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---d~vi   85 (331)
                      +|+|.|+| .|.+|+.+++.|.+.|+ +|++.+|++.....+.+.      ++.       ...++.++++++   |+||
T Consensus        22 ~mkIgiIG-lG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~------g~~-------~~~s~~e~~~~a~~~DvVi   86 (358)
T 4e21_A           22 SMQIGMIG-LGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE------GIA-------GARSIEEFCAKLVKPRVVW   86 (358)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT------TCB-------CCSSHHHHHHHSCSSCEEE
T ss_pred             CCEEEEEC-chHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC------CCE-------EeCCHHHHHhcCCCCCEEE
Confidence            46999998 59999999999999999 999999887655544432      221       112334444444   9999


Q ss_pred             Eccc
Q 020110           86 HVAS   89 (331)
Q Consensus        86 h~a~   89 (331)
                      -+..
T Consensus        87 ~~vp   90 (358)
T 4e21_A           87 LMVP   90 (358)
T ss_dssp             ECSC
T ss_pred             EeCC
Confidence            7653

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.86  E-value=0.0053  Score=52.38  Aligned_cols=109  Identities=14%  Similarity=0.101  Sum_probs=71.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccch-hhcCCCC---CCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSH-LFALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~-~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      |||.|+|+ |.+|..++..|+..+ ..+|..++++...... ..++...   .. ++++.. +  +.    +.++++|+|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~-~~~v~~-~--~~----~a~~~aD~V   71 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAH-PVWVWA-G--SY----GDLEGARAV   71 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSC-CCEEEE-C--CG----GGGTTEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcC-CeEEEE-C--CH----HHhCCCCEE
Confidence            48999998 999999999999887 2389999886432221 1111100   01 333332 2  22    347899999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCE-EEEe
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVT  129 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~  129 (331)
                      |..++.....  .....+....|......+.+.+.+...+- +|.+
T Consensus        72 ii~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  115 (310)
T 2xxj_A           72 VLAAGVAQRP--GETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA  115 (310)
T ss_dssp             EECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EECCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe
Confidence            9999864321  22346778999999999999888875444 4443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.86  E-value=0.0022  Score=54.34  Aligned_cols=69  Identities=9%  Similarity=0.155  Sum_probs=51.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|+|+|+ |-+|+.+++.|...|. +|++.+|+........+.      +++.+     +.+++.++++++|+|+.+
T Consensus       154 ~g~~v~IiG~-G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~~~-----~~~~l~~~l~~aDvVi~~  220 (293)
T 3d4o_A          154 HGANVAVLGL-GRVGMSVARKFAALGA-KVKVGARESDLLARIAEM------GMEPF-----HISKAAQELRDVDVCINT  220 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TSEEE-----EGGGHHHHTTTCSEEEEC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHC------CCeec-----ChhhHHHHhcCCCEEEEC
Confidence            4679999995 9999999999999999 999998876543333222      33332     224577788999999988


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      ..
T Consensus       221 ~p  222 (293)
T 3d4o_A          221 IP  222 (293)
T ss_dssp             CS
T ss_pred             CC
Confidence            64

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.83  E-value=0.0063  Score=51.58  Aligned_cols=64  Identities=25%  Similarity=0.277  Sum_probs=42.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      +||-++|- |.+|..+++.|++.|| +|++.+|++.....+.+.      +++..       ++..++++++|+||-+.
T Consensus         6 ~kIgfIGL-G~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~------G~~~~-------~s~~e~~~~~dvvi~~l   69 (297)
T 4gbj_A            6 EKIAFLGL-GNLGTPIAEILLEAGY-ELVVWNRTASKAEPLTKL------GATVV-------ENAIDAITPGGIVFSVL   69 (297)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-EEEEC-------CTTTTT------TCEEC-------SSGGGGCCTTCEEEECC
T ss_pred             CcEEEEec-HHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHc------CCeEe-------CCHHHHHhcCCceeeec
Confidence            48999985 9999999999999999 999999988776555432      33221       23445677899998764

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.83  E-value=0.0043  Score=53.07  Aligned_cols=72  Identities=13%  Similarity=0.123  Sum_probs=46.8

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC--CccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG--SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      |+...||+|.|+|. |.+|+.+++.|.+.|+.+|++.+|++  .....+.+.      ++..       ..+..++++++
T Consensus        19 ~~~~~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~------g~~~-------~~~~~e~~~~a   84 (312)
T 3qsg_A           19 YFQSNAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEEL------GVSC-------KASVAEVAGEC   84 (312)
T ss_dssp             ------CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHT------TCEE-------CSCHHHHHHHC
T ss_pred             cccCCCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHC------CCEE-------eCCHHHHHhcC
Confidence            33345789999996 99999999999999976899998863  333333322      3222       12345667789


Q ss_pred             cEEEEccc
Q 020110           82 KGVFHVAS   89 (331)
Q Consensus        82 d~vih~a~   89 (331)
                      |+||-+..
T Consensus        85 DvVi~~vp   92 (312)
T 3qsg_A           85 DVIFSLVT   92 (312)
T ss_dssp             SEEEECSC
T ss_pred             CEEEEecC
Confidence            99997654

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.83  E-value=0.00053  Score=52.33  Aligned_cols=71  Identities=13%  Similarity=0.097  Sum_probs=48.2

Q ss_pred             hHHHHHHHHHHHHCCCCEEEEEecCCCccch---hhcCCCCCCCcEEEEEccCCCc--hHHHHHhc------CccEEEEc
Q 020110           19 GFIGTWLVKTLLDNNYTSINATVFPGSDSSH---LFALPGAGDANLRVFEADVLDS--GAVSRAVE------GCKGVFHV   87 (331)
Q Consensus        19 G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~------~~d~vih~   87 (331)
                      |.++...++.|.+.|. +|++..|+......   ..+.....+.++..+.+|++++  +++.++++      +-|++|||
T Consensus        26 ~~p~~a~a~~La~~Ga-~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnn  104 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGV-DVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHC  104 (157)
T ss_dssp             BCCCHHHHHHHHHTTC-CEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEEC
T ss_pred             CCCCHHHHHHHHHcCC-CEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence            6788999999999999 88777675443221   1111111122677788999998  88776653      23999999


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ||.
T Consensus       105 Agg  107 (157)
T 3gxh_A          105 LAN  107 (157)
T ss_dssp             SBS
T ss_pred             CCC
Confidence            985

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.81  E-value=0.0024  Score=54.26  Aligned_cols=35  Identities=17%  Similarity=0.295  Sum_probs=31.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      |++|.|+||+|.+|+.++..|.+.|+ +|++.+|++
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~~   55 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGY-PISILDRED   55 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECCc
Confidence            46899999889999999999999999 999987764

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.81  E-value=0.0031  Score=55.63  Aligned_cols=74  Identities=18%  Similarity=0.100  Sum_probs=52.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCC------------------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL------------------   69 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~------------------   69 (331)
                      ..++|+|+|+ |-+|...++.+...|. +|++.+|++........+      +.+++..|..                  
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~------Ga~~~~i~~~~~~~~~~~~~~~~~~s~~  242 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGA-VVMATDVRAATKEQVESL------GGKFITVDDEAMKTAETAGGYAKEMGEE  242 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHT------TCEECCC---------------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCeEEeecccccccccccccchhhcCHH
Confidence            4579999996 9999999999999999 899998877654444443      3333211221                  


Q ss_pred             ----CchHHHHHhcCccEEEEccc
Q 020110           70 ----DSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        70 ----~~~~~~~~~~~~d~vih~a~   89 (331)
                          +.+.+.+.+.++|+||+++.
T Consensus       243 ~~~~~~~~l~~~~~~aDvVi~~~~  266 (384)
T 1l7d_A          243 FRKKQAEAVLKELVKTDIAITTAL  266 (384)
T ss_dssp             --CCHHHHHHHHHTTCSEEEECCC
T ss_pred             HHhhhHHHHHHHhCCCCEEEECCc
Confidence                12236677889999999873

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.81  E-value=0.0018  Score=56.26  Aligned_cols=33  Identities=24%  Similarity=0.440  Sum_probs=27.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEe
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATV   41 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~   41 (331)
                      |++|.|.||+|++|+.+++.|.+...-+|+++.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            569999999999999999998876432777775

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.79  E-value=0.0025  Score=57.41  Aligned_cols=80  Identities=11%  Similarity=0.119  Sum_probs=50.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCC-CCCcEE-EE-----EccCCCchHHHHHhcCcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLR-VF-----EADVLDSGAVSRAVEGCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~-~~-----~~Dl~~~~~~~~~~~~~d   82 (331)
                      |+|.|+|+ |++|..++..|.+.|+ +|++++|++.....+.+-... ...+.. .+     .+.+.-..+..++++++|
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD   80 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD   80 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence            58999986 9999999999999999 999999987655444331000 000000 00     011111234556778899


Q ss_pred             EEEEcccCC
Q 020110           83 GVFHVASPC   91 (331)
Q Consensus        83 ~vih~a~~~   91 (331)
                      +||-+.+..
T Consensus        81 vViiaVptp   89 (450)
T 3gg2_A           81 IIFIAVGTP   89 (450)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEEcCCC
Confidence            999887543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.75  E-value=0.0013  Score=57.49  Aligned_cols=73  Identities=11%  Similarity=0.048  Sum_probs=52.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc-hHHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~vih~   87 (331)
                      ..+|||+|+ |-+|...++.+...|. +|+++++++.....+.++      ++..+ .|..+. +..+++..++|+||.+
T Consensus       180 g~~VlV~Ga-G~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~v-~~~~~~~~~~~~~~~~~D~vid~  250 (360)
T 1piw_A          180 GKKVGIVGL-GGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM------GADHY-IATLEEGDWGEKYFDTFDLIVVC  250 (360)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH------TCSEE-EEGGGTSCHHHHSCSCEEEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc------CCCEE-EcCcCchHHHHHhhcCCCEEEEC
Confidence            468999999 9999999999988999 999999887766655553      22221 344333 3333333579999999


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ++.
T Consensus       251 ~g~  253 (360)
T 1piw_A          251 ASS  253 (360)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            875

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.74  E-value=0.00091  Score=56.53  Aligned_cols=66  Identities=15%  Similarity=0.222  Sum_probs=48.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      ||+|.|.| +|.+|+.+++.|.+.|+ +|++.+|++.....+.+.      ++..       ..+..++++++|+||-+.
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~~-------~~~~~~~~~~advvi~~v   65 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVAL------GARQ-------ASSPAEVCAACDITIAML   65 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHH------TCEE-------CSCHHHHHHHCSEEEECC
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHC------CCee-------cCCHHHHHHcCCEEEEEc
Confidence            56899998 59999999999999999 999999987765554432      2221       123455667789888765


Q ss_pred             c
Q 020110           89 S   89 (331)
Q Consensus        89 ~   89 (331)
                      .
T Consensus        66 ~   66 (287)
T 3pdu_A           66 A   66 (287)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.72  E-value=0.0038  Score=52.32  Aligned_cols=96  Identities=18%  Similarity=0.214  Sum_probs=56.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEE-ecCCCcc--chhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINAT-VFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~-~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      |.||.|.|++|-+|+.+++.+.+. +. ++++. +|+.+..  ....++.+..       ..++.-..++.+++.++|+|
T Consensus        21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~-eLvg~vd~~~~~~~G~d~gel~G~~-------~~gv~v~~dl~~ll~~aDVv   92 (288)
T 3ijp_A           21 SMRLTVVGANGRMGRELITAIQRRKDV-ELCAVLVRKGSSFVDKDASILIGSD-------FLGVRITDDPESAFSNTEGI   92 (288)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTCSSE-EEEEEBCCTTCTTTTSBGGGGTTCS-------CCSCBCBSCHHHHTTSCSEE
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCCccccccchHHhhccC-------cCCceeeCCHHHHhcCCCEE
Confidence            469999999999999999998865 56 66655 4443211  0111111100       11222224566777889999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      |.+..          +.        .+...++.|.++|+ .+|. +|+
T Consensus        93 IDFT~----------p~--------a~~~~~~~~l~~Gv-~vVi-GTT  120 (288)
T 3ijp_A           93 LDFSQ----------PQ--------ASVLYANYAAQKSL-IHII-GTT  120 (288)
T ss_dssp             EECSC----------HH--------HHHHHHHHHHHHTC-EEEE-CCC
T ss_pred             EEcCC----------HH--------HHHHHHHHHHHcCC-CEEE-ECC
Confidence            98753          22        23356666777775 3553 443

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.68  E-value=0.0013  Score=56.54  Aligned_cols=73  Identities=11%  Similarity=0.118  Sum_probs=52.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ...+|||+||+|-+|...++.+...|. +|+++.++.. .....++      ++.. ..|..+.+.+.+.+.++|+||++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~~~-~~~~~~l------Ga~~-~i~~~~~~~~~~~~~g~D~v~d~  222 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTASKRN-HAFLKAL------GAEQ-CINYHEEDFLLAISTPVDAVIDL  222 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEECHHH-HHHHHHH------TCSE-EEETTTSCHHHHCCSCEEEEEES
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeccch-HHHHHHc------CCCE-EEeCCCcchhhhhccCCCEEEEC
Confidence            356899999999999999999999999 9998875432 3333333      2222 24555544466666889999998


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      ++
T Consensus       223 ~g  224 (321)
T 3tqh_A          223 VG  224 (321)
T ss_dssp             SC
T ss_pred             CC
Confidence            76

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.67  E-value=0.003  Score=53.35  Aligned_cols=64  Identities=20%  Similarity=0.301  Sum_probs=48.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |+|.|.|. |.+|+.+++.|.+.|+ +|++.+|++.....+.+.      ++..       ..+..++++++|+||-+.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~~-------~~~~~~~~~~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAAL------GAER-------AATPCEVVESCPVTFAML   65 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHT------TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHC------CCee-------cCCHHHHHhcCCEEEEEc
Confidence            58999996 9999999999999999 999999987766555442      2221       134556677789988764

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.66  E-value=0.003  Score=54.15  Aligned_cols=111  Identities=16%  Similarity=0.135  Sum_probs=68.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCC-----CCCCCcEEEEEccCCCchHHHHHhcCcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALP-----GAGDANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~-----~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      +++|.|+|+ |.+|+.++..|...|+.+|++.++++....... .+.     .....++... .|      . +.++++|
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~a~~~aD   74 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-DD------Y-ADISGSD   74 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-CC------H-HHhCCCC
Confidence            358999998 999999999999998646999988764433210 000     0000022211 22      2 3578899


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCE-EEEeC
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S  130 (331)
                      +||-+++.....  .....+....|......+++.+.+...+. +|.+|
T Consensus        75 iVi~avg~p~~~--g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~s  121 (317)
T 2ewd_A           75 VVIITASIPGRP--KDDRSELLFGNARILDSVAEGVKKYCPNAFVICIT  121 (317)
T ss_dssp             EEEECCCCSSCC--SSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            999998754432  12234556777777778888776653333 44444

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.65  E-value=0.0023  Score=56.19  Aligned_cols=73  Identities=12%  Similarity=0.100  Sum_probs=52.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      ..+|||+|+ |-+|...++.+...|. +|+++++++.......++      ++..+ .|..+.+.+.++..++|+||+++
T Consensus       195 g~~VlV~Ga-G~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~l------Ga~~v-i~~~~~~~~~~~~~g~Dvvid~~  265 (369)
T 1uuf_A          195 GKKVGVVGI-GGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL------GADEV-VNSRNADEMAAHLKSFDFILNTV  265 (369)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH------TCSEE-EETTCHHHHHTTTTCEEEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCcEE-eccccHHHHHHhhcCCCEEEECC
Confidence            468999998 7899999999988999 899999877665555543      22221 35555444444446799999998


Q ss_pred             cC
Q 020110           89 SP   90 (331)
Q Consensus        89 ~~   90 (331)
                      +.
T Consensus       266 g~  267 (369)
T 1uuf_A          266 AA  267 (369)
T ss_dssp             SS
T ss_pred             CC
Confidence            74

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.65  E-value=0.0022  Score=55.24  Aligned_cols=72  Identities=19%  Similarity=0.211  Sum_probs=48.8

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc--hHHHHHh-cCccEEEEc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS--GAVSRAV-EGCKGVFHV   87 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~-~~~d~vih~   87 (331)
                      +|||+|++|-+|...++.+...|. +|+++++++.....+.++      ++..+ .|..+.  +.+.++. .++|+||++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l------Ga~~~-i~~~~~~~~~~~~~~~~~~d~vid~  223 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVL------GAKEV-LAREDVMAERIRPLDKQRWAAAVDP  223 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHT------TCSEE-EECC---------CCSCCEEEEEEC
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc------CCcEE-EecCCcHHHHHHHhcCCcccEEEEC
Confidence            799999999999999999999999 899999887666666554      22211 233332  1122222 258999999


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ++.
T Consensus       224 ~g~  226 (328)
T 1xa0_A          224 VGG  226 (328)
T ss_dssp             STT
T ss_pred             CcH
Confidence            873

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.64  E-value=0.0024  Score=57.40  Aligned_cols=79  Identities=10%  Similarity=0.128  Sum_probs=49.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC-CCCCcEE-EE-----EccCCCchHHHHHhcCcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLR-VF-----EADVLDSGAVSRAVEGCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~-~~-----~~Dl~~~~~~~~~~~~~d   82 (331)
                      |+|.|+| +|.+|..++..|.+.|+ +|++++|++.....+.+-.. ....+.. .+     .+.+....+..+.++++|
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~-~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD   78 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence            3799998 59999999999999999 99999987655444433100 0000000 00     011111223445677899


Q ss_pred             EEEEcccC
Q 020110           83 GVFHVASP   90 (331)
Q Consensus        83 ~vih~a~~   90 (331)
                      +||-+...
T Consensus        79 vviiaVpt   86 (436)
T 1mv8_A           79 VSFICVGT   86 (436)
T ss_dssp             EEEECCCC
T ss_pred             EEEEEcCC
Confidence            99988754

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.63  E-value=0.0012  Score=55.40  Aligned_cols=74  Identities=16%  Similarity=0.104  Sum_probs=48.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.++++|+|+ |.+|+.++..|++.|. +|++..|+..+...+.+...... .+..  .|+   +++.+  .++|+||++
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~-~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~~~--~~~DivIn~  187 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DSIPL--QTYDLVINA  187 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GGCCC--SCCSEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HHhcc--CCCCEEEEC
Confidence            4579999998 7799999999999998 99999998655444332111000 1222  232   11100  379999999


Q ss_pred             ccCC
Q 020110           88 ASPC   91 (331)
Q Consensus        88 a~~~   91 (331)
                      ++..
T Consensus       188 t~~~  191 (272)
T 1p77_A          188 TSAG  191 (272)
T ss_dssp             CCC-
T ss_pred             CCCC
Confidence            8754

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.63  E-value=0.0028  Score=53.61  Aligned_cols=65  Identities=15%  Similarity=0.248  Sum_probs=45.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +||+|.|+|+ |.+|+.+++.|.+.|+ +|++.+ ++.....+.+.      ++       ....+..++++++|+||-+
T Consensus         2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~-~V~~~~-~~~~~~~~~~~------g~-------~~~~~~~~~~~~~D~vi~~   65 (295)
T 1yb4_A            2 NAMKLGFIGL-GIMGSPMAINLARAGH-QLHVTT-IGPVADELLSL------GA-------VNVETARQVTEFADIIFIM   65 (295)
T ss_dssp             --CEEEECCC-STTHHHHHHHHHHTTC-EEEECC-SSCCCHHHHTT------TC-------BCCSSHHHHHHTCSEEEEC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCC-EEEEEc-CHHHHHHHHHc------CC-------cccCCHHHHHhcCCEEEEE
Confidence            3579999995 9999999999999999 999887 65544444332      11       1122355566788999876


Q ss_pred             c
Q 020110           88 A   88 (331)
Q Consensus        88 a   88 (331)
                      .
T Consensus        66 v   66 (295)
T 1yb4_A           66 V   66 (295)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.63  E-value=0.0022  Score=55.80  Aligned_cols=69  Identities=14%  Similarity=0.167  Sum_probs=51.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ...+|||+|+ |-+|...++.+...|. +|+++++++.....+.++      +...+.   .+.+.+.   +++|+||++
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~v~---~~~~~~~---~~~D~vid~  241 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSM------GVKHFY---TDPKQCK---EELDFIIST  241 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHT------TCSEEE---SSGGGCC---SCEEEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhc------CCCeec---CCHHHHh---cCCCEEEEC
Confidence            3569999997 9999999999999999 999999888777766665      222222   3333332   279999998


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ++.
T Consensus       242 ~g~  244 (348)
T 3two_A          242 IPT  244 (348)
T ss_dssp             CCS
T ss_pred             CCc
Confidence            874

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.62  E-value=0.0015  Score=55.46  Aligned_cols=65  Identities=18%  Similarity=0.269  Sum_probs=47.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |+|.|+| +|.+|+.+++.|.+.|+ +|++.+|++.....+.+.      ++..       ..+..++++++|+||-+..
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~------g~~~-------~~~~~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAA------GAET-------ASTAKAIAEQCDVIITMLP   70 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC------CCee-------cCCHHHHHhCCCEEEEECC
Confidence            5899999 59999999999999999 999998876554444332      2221       1234455667899998753

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.61  E-value=0.0023  Score=57.94  Aligned_cols=45  Identities=18%  Similarity=0.200  Sum_probs=37.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~   53 (331)
                      ...+|||+||+|-+|...++.+...|. +|+++++++.+...+.++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~l  272 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAM  272 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHhh
Confidence            346899999999999999999999999 999988766555555444

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.59  E-value=0.0011  Score=58.95  Aligned_cols=79  Identities=13%  Similarity=0.101  Sum_probs=48.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCC-CCCcEE-EE---EccCCCchHHHHHhcCcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLR-VF---EADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~-~~---~~Dl~~~~~~~~~~~~~d   82 (331)
                      ++|+|.|.|. |++|..++..|.+ |+ +|++.+|++.....+.+-... ...+++ .+   .+.+.-..+..++++++|
T Consensus        35 ~~mkIaVIGl-G~mG~~lA~~La~-G~-~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aD  111 (432)
T 3pid_A           35 EFMKITISGT-GYVGLSNGVLIAQ-NH-EVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNAD  111 (432)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHT-TS-EEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHc-CC-eEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCC
Confidence            4679999995 9999999998887 99 999999987655444331000 000000 00   011111234556788999


Q ss_pred             EEEEccc
Q 020110           83 GVFHVAS   89 (331)
Q Consensus        83 ~vih~a~   89 (331)
                      +||-+..
T Consensus       112 vViiaVP  118 (432)
T 3pid_A          112 YVIIATP  118 (432)
T ss_dssp             EEEECCC
T ss_pred             EEEEeCC
Confidence            9997653

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.59  E-value=0.0015  Score=54.33  Aligned_cols=68  Identities=10%  Similarity=0.023  Sum_probs=47.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +||+|.|+| +|.+|+.+++.|.+.|+ +|.+.+|++.....+.+..     ++.       -..+..++++++|+||-+
T Consensus         2 ~~m~i~iiG-~G~mG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~-----g~~-------~~~~~~~~~~~~D~Vi~~   67 (259)
T 2ahr_A            2 NAMKIGIIG-VGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQL-----ALP-------YAMSHQDLIDQVDLVILG   67 (259)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHH-----TCC-------BCSSHHHHHHTCSEEEEC
T ss_pred             CccEEEEEC-CCHHHHHHHHHHHhCCC-eEEEECCCHHHHHHHHHHc-----CCE-------eeCCHHHHHhcCCEEEEE
Confidence            356999999 59999999999999998 9999988765443332210     111       112345566789999977


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      ..
T Consensus        68 v~   69 (259)
T 2ahr_A           68 IK   69 (259)
T ss_dssp             SC
T ss_pred             eC
Confidence            53

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.58  E-value=0.0018  Score=56.34  Aligned_cols=75  Identities=11%  Similarity=0.109  Sum_probs=50.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch---HHHHHhc--Ccc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~d   82 (331)
                      ...+|||+|+ |.+|...++.+...|..+|++++|++.......++      ++..+ .|..+.+   .+.++..  ++|
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~------Ga~~~-~~~~~~~~~~~v~~~~~g~g~D  238 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV------GADYV-INPFEEDVVKEVMDITDGNGVD  238 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH------TCSEE-ECTTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh------CCCEE-ECCCCcCHHHHHHHHcCCCCCC
Confidence            3468999999 99999999999999975789888876554444443      22221 3444433   2333322  589


Q ss_pred             EEEEcccC
Q 020110           83 GVFHVASP   90 (331)
Q Consensus        83 ~vih~a~~   90 (331)
                      +||++++.
T Consensus       239 ~vid~~g~  246 (348)
T 2d8a_A          239 VFLEFSGA  246 (348)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999873

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.56  E-value=0.0066  Score=50.50  Aligned_cols=56  Identities=14%  Similarity=0.176  Sum_probs=46.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ..+++++|+|+++.+|+.++..|+..|. .|+...|..                           ..+.+.++++|+||.
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t---------------------------~~L~~~~~~ADIVI~  209 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT---------------------------KDLSLYTRQADLIIV  209 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------------SCHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc---------------------------hhHHHHhhcCCEEEE
Confidence            3578999999999999999999999999 999886432                           135677889999999


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      ..+.
T Consensus       210 Avg~  213 (285)
T 3p2o_A          210 AAGC  213 (285)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            8874

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=96.55  E-value=0.033  Score=50.43  Aligned_cols=75  Identities=11%  Similarity=0.165  Sum_probs=49.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      .||+|.|+|. |.+|+.+++.|.+.|+ +|++.+|++.....+.+...... ++..    ..+.+++.+.++++|+||-+
T Consensus         3 ~~~kIgiIGl-G~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~g~-~i~~----~~s~~e~v~~l~~aDvVil~   75 (484)
T 4gwg_A            3 AQADIALIGL-AVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEAKGT-KVVG----AQSLKEMVSKLKKPRRIILL   75 (484)
T ss_dssp             CCBSEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTTTTS-SCEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred             CCCEEEEECh-hHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcccCCC-ceec----cCCHHHHHhhccCCCEEEEe
Confidence            3578999995 9999999999999999 99999998876655543211000 1111    12333333334569999976


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      ..
T Consensus        76 Vp   77 (484)
T 4gwg_A           76 VK   77 (484)
T ss_dssp             SC
T ss_pred             cC
Confidence            53

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=96.55  E-value=0.0014  Score=59.57  Aligned_cols=42  Identities=12%  Similarity=0.222  Sum_probs=34.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC--CCCEEEEEecCCCccchhh
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLF   51 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~   51 (331)
                      +||+|.|+|. |++|..++..|.+.  |+ +|++++|++.....+.
T Consensus         8 ~~mkI~VIG~-G~vG~~~A~~La~~g~g~-~V~~~D~~~~~v~~l~   51 (481)
T 2o3j_A            8 KVSKVVCVGA-GYVGGPTCAMIAHKCPHI-TVTVVDMNTAKIAEWN   51 (481)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHHHCTTS-EEEEECSCHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCC-EEEEEECCHHHHHHHH
Confidence            4679999996 99999999999998  68 9999998765544443

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.55  E-value=0.012  Score=49.84  Aligned_cols=111  Identities=14%  Similarity=0.125  Sum_probs=69.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .|+||.|+|| |.+|..++..|+..|+ .+|..++++.........+......+++.. .|      + +.++++|+||-
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t-~d------~-~~l~~aD~Vi~   83 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS-KD------L-SASAHSKVVIF   83 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEE-SC------G-GGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEe-CC------H-HHHCCCCEEEE
Confidence            4679999997 9999999999998874 478888876531111111100010134331 33      2 34789999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEE-EEeC
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV-VVTS  130 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-v~~S  130 (331)
                      .++...   ......+....|....+.+++.+.+...+.+ |.+|
T Consensus        84 aag~~~---pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s  125 (303)
T 2i6t_A           84 TVNSLG---SSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS  125 (303)
T ss_dssp             CCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred             cCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence            998742   2234567788999999999998887654444 4444

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.54  E-value=0.018  Score=49.27  Aligned_cols=112  Identities=14%  Similarity=0.095  Sum_probs=68.1

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccc--hh--hcCCCCCCCcEEEEEccCCCchHHHHHhcCc
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS--HL--FALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~--~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      .++|+|.|+|+ |.+|+.++..|...|+ .+|++++|+.....  ..  ........ ...+...  .+.    +.++++
T Consensus         5 ~~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~-~~~v~~~--~~~----~~~~~a   76 (319)
T 1lld_A            5 VKPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYP-TVSIDGS--DDP----EICRDA   76 (319)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGST-TCEEEEE--SCG----GGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcC-CeEEEeC--CCH----HHhCCC
Confidence            34579999998 9999999999999885 37888888753322  11  11000000 1222111  122    246789


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      |+||-+++....  ......+....|......+++...+.+.+.+|.
T Consensus        77 D~Vii~v~~~~~--~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi  121 (319)
T 1lld_A           77 DMVVITAGPRQK--PGQSRLELVGATVNILKAIMPNLVKVAPNAIYM  121 (319)
T ss_dssp             SEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred             CEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence            999998865332  123345677888888888888776654444444

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.53  E-value=0.003  Score=55.13  Aligned_cols=74  Identities=12%  Similarity=0.006  Sum_probs=53.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...+|||+|+ |-+|...++.+...|. +|+++++++....... ++      +... ..|..+.+.+.++..++|+||+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~l------Ga~~-vi~~~~~~~~~~~~~g~D~vid  250 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDL------GADD-YVIGSDQAKMSELADSLDYVID  250 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTS------CCSC-EEETTCHHHHHHSTTTEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHc------CCce-eeccccHHHHHHhcCCCCEEEE
Confidence            3568999996 9999999999888999 9999998776555444 33      2211 1344455556555567999999


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      +++.
T Consensus       251 ~~g~  254 (357)
T 2cf5_A          251 TVPV  254 (357)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9874

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.53  E-value=0.0039  Score=55.22  Aligned_cols=75  Identities=13%  Similarity=0.061  Sum_probs=52.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCC-------------Cc---
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-------------DS---   71 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-------------~~---   71 (331)
                      ..++|+|+|+ |-+|...++.+...|. +|++++|++........+      +.+++..|..             +.   
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~l------Ga~~~~~~~~~~~~~~~g~~~~~~~~~~  242 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSM------GAEFLELDFKEEAGSGDGYAKVMSDAFI  242 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHT------TCEECCC--------CCHHHHHHSHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc------CCEEEEecccccccccccchhhccHHHH
Confidence            3579999997 9999999999999999 999998877654444443      3344322221             11   


Q ss_pred             ----hHHHHHhcCccEEEEcccC
Q 020110           72 ----GAVSRAVEGCKGVFHVASP   90 (331)
Q Consensus        72 ----~~~~~~~~~~d~vih~a~~   90 (331)
                          +.+.+++.++|+||.++..
T Consensus       243 ~~~~~~l~e~~~~aDvVI~~~~~  265 (401)
T 1x13_A          243 KAEMELFAAQAKEVDIIVTTALI  265 (401)
T ss_dssp             HHHHHHHHHHHHHCSEEEECCCC
T ss_pred             HHHHHHHHHHhCCCCEEEECCcc
Confidence                1366677789999998644

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=96.52  E-value=0.013  Score=50.94  Aligned_cols=95  Identities=14%  Similarity=0.103  Sum_probs=53.2

Q ss_pred             CeEEEeCcchHHHHHHHH-HHHHCCC--CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVK-TLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~-~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ++|.|.||||++|+.|++ .|.+..+  .++..++.+. .-..+..+.+.   ...+  -|..+++    .++++|+||-
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~---~~~~--~~~~~~~----~~~~~Dvvf~   70 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGKD---AGML--HDAFDIE----SLKQLDAVIT   70 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSSC---CCBC--EETTCHH----HHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCCC---ceEE--EecCChh----HhccCCEEEE
Confidence            489999999999999999 5555442  2666554322 11111111110   1111  2222222    2578999998


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCcc
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSI  132 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~  132 (331)
                      +.+..                  .+..++..+.+.|++ ++|=.||.
T Consensus        71 a~~~~------------------~s~~~~~~~~~~G~k~~VID~ss~   99 (370)
T 3pzr_A           71 CQGGS------------------YTEKVYPALRQAGWKGYWIDAAST   99 (370)
T ss_dssp             CSCHH------------------HHHHHHHHHHHTTCCCEEEECSST
T ss_pred             CCChH------------------HHHHHHHHHHHCCCCEEEEeCCch
Confidence            86531                  133566666677874 66666654

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.50  E-value=0.0034  Score=53.42  Aligned_cols=66  Identities=14%  Similarity=0.086  Sum_probs=45.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      +|+|.|+|. |.+|+.+++.|.+.|+ +|++.+|++.....+.+.      +......|+      .++++++|+||-+.
T Consensus         7 ~~~I~iIG~-G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~~~~~~~------~e~~~~aDvvi~~v   72 (303)
T 3g0o_A            7 DFHVGIVGL-GSMGMGAARSCLRAGL-STWGADLNPQACANLLAE------GACGAAASA------REFAGVVDALVILV   72 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCSEEESSS------TTTTTTCSEEEECC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHc------CCccccCCH------HHHHhcCCEEEEEC
Confidence            468999985 9999999999999999 999999887655544432      221111222      23456678877654

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.49  E-value=0.0035  Score=54.43  Aligned_cols=74  Identities=11%  Similarity=0.052  Sum_probs=51.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCC--chHHHHHh-cCccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD--SGAVSRAV-EGCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~-~~~d~v   84 (331)
                      ...+|||+||+|-+|...++.+...|. +|+++++++.....+.++      +...+ .|..+  .+.+.+.. .++|+|
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~v-i~~~~~~~~~~~~~~~~g~Dvv  221 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM------GADIV-LNHKESLLNQFKTQGIELVDYV  221 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH------TCSEE-ECTTSCHHHHHHHHTCCCEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc------CCcEE-EECCccHHHHHHHhCCCCccEE
Confidence            356999999999999999999999999 999998876655555553      22211 23322  12333332 258999


Q ss_pred             EEccc
Q 020110           85 FHVAS   89 (331)
Q Consensus        85 ih~a~   89 (331)
                      |++++
T Consensus       222 ~d~~g  226 (346)
T 3fbg_A          222 FCTFN  226 (346)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99876

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.49  E-value=0.0003  Score=59.57  Aligned_cols=78  Identities=12%  Similarity=0.079  Sum_probs=48.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCC-CCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAG-DANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      +.++++|+|+ |.+|+.++..|++.|  +|++.+|+......+.+..... .... .+.+|+.+.   .+.+.++|+||+
T Consensus       127 ~~k~vlV~Ga-GgiG~aia~~L~~~G--~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~DilVn  199 (287)
T 1nvt_A          127 KDKNIVIYGA-GGAARAVAFELAKDN--NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVDIIIN  199 (287)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS--EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT---TCCCTTCCEEEE
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH---HHhhCCCCEEEE
Confidence            4579999998 599999999999999  8888888754433332110000 0000 011233331   234567999999


Q ss_pred             cccCCC
Q 020110           87 VASPCT   92 (331)
Q Consensus        87 ~a~~~~   92 (331)
                      +++...
T Consensus       200 ~ag~~~  205 (287)
T 1nvt_A          200 ATPIGM  205 (287)
T ss_dssp             CSCTTC
T ss_pred             CCCCCC
Confidence            998644

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.49  E-value=0.0036  Score=56.43  Aligned_cols=45  Identities=20%  Similarity=0.255  Sum_probs=37.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~   53 (331)
                      ...+|||+||+|-||...++.+...|. +|+++++++.....+.++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~l  264 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRAL  264 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc
Confidence            356899999999999999999999999 999988876655555554

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.49  E-value=0.0081  Score=55.87  Aligned_cols=67  Identities=16%  Similarity=0.133  Sum_probs=56.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~a   88 (331)
                      ++|+|.|+ |-+|+++++.|.+.|+ +|+++++++......         . .++.+|.+|++.++++ ++++|.+|-+.
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~---------~-~~i~gD~t~~~~L~~agi~~ad~vi~~~  416 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPV-PFILIDRQESPVCND---------H-VVVYGDATVGQTLRQAGIDRASGIIVTT  416 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTC-CEEEEESSCCSSCCS---------S-CEEESCSSSSTHHHHHTTTSCSEEEECC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCC-CEEEEECChHHHhhc---------C-CEEEeCCCCHHHHHhcCccccCEEEEEC
Confidence            68999998 9999999999999999 999999887654432         2 5889999999988766 47799998654

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.47  E-value=0.004  Score=50.96  Aligned_cols=34  Identities=9%  Similarity=0.076  Sum_probs=28.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEE-EecCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINA-TVFPG   44 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~-~~r~~   44 (331)
                      |+||.|+|+ |.+|+.+++.+.+.++ ++++ ++|+.
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~-eLva~~d~~~   37 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGH-EIVGVIENTP   37 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEECSSC
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCC-EEEEEEecCc
Confidence            679999999 9999999999999988 7776 45543

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.46  E-value=0.0041  Score=54.23  Aligned_cols=74  Identities=16%  Similarity=0.036  Sum_probs=48.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEE------ccCC-CchHHHHHhcCc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE------ADVL-DSGAVSRAVEGC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~Dl~-~~~~~~~~~~~~   81 (331)
                      +|+|.|.|+ |.+|+.++..|.+.|+ +|++++|++.....+.+..     ++....      ..+. ...+..++++++
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRG-----AIIAEGPGLAGTAHPDLLTSDIGLAVKDA   76 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHT-----SEEEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcC-----CeEEeccccccccccceecCCHHHHHhcC
Confidence            369999997 9999999999999999 9999988765444333210     111110      0110 123455667889


Q ss_pred             cEEEEccc
Q 020110           82 KGVFHVAS   89 (331)
Q Consensus        82 d~vih~a~   89 (331)
                      |+||-+..
T Consensus        77 D~vi~~v~   84 (359)
T 1bg6_A           77 DVILIVVP   84 (359)
T ss_dssp             SEEEECSC
T ss_pred             CEEEEeCC
Confidence            99998764

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.46  E-value=0.004  Score=52.83  Aligned_cols=64  Identities=8%  Similarity=0.027  Sum_probs=49.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      ++|.|+|. |.+|+.+++.|.+.|+ +|++.+|++.....+.+.      +++.       ..+..++++ +|+||-+..
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~~-------~~~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEA------GATL-------ADSVADVAA-ADLIHITVL   79 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHT------TCEE-------CSSHHHHTT-SSEEEECCS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC------CCEE-------cCCHHHHHh-CCEEEEECC
Confidence            58999985 9999999999999999 999999988776665543      3322       234566777 999997653

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.45  E-value=0.012  Score=52.98  Aligned_cols=78  Identities=13%  Similarity=0.004  Sum_probs=53.3

Q ss_pred             CCcccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-c---chhhcCCCCCCCcEEEEEccCCCchHHHH
Q 020110            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-S---SHLFALPGAGDANLRVFEADVLDSGAVSR   76 (331)
Q Consensus         1 m~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~---~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   76 (331)
                      |..++..++|+|+|.|. |-.|..+++.|.++|+ +|++.+++... .   ..+.+.      ++++..+.-.  +   .
T Consensus         1 m~~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~-~V~~~D~~~~~~~~~~~~L~~~------gi~~~~g~~~--~---~   67 (451)
T 3lk7_A            1 MKTITTFENKKVLVLGL-ARSGEAAARLLAKLGA-IVTVNDGKPFDENPTAQSLLEE------GIKVVCGSHP--L---E   67 (451)
T ss_dssp             ---CCTTTTCEEEEECC-TTTHHHHHHHHHHTTC-EEEEEESSCGGGCHHHHHHHHT------TCEEEESCCC--G---G
T ss_pred             CcchhhcCCCEEEEEee-CHHHHHHHHHHHhCCC-EEEEEeCCcccCChHHHHHHhC------CCEEEECCCh--H---H
Confidence            44455556789999998 8899999999999999 99999886532 1   222222      6666655432  2   2


Q ss_pred             HhcC-ccEEEEcccCC
Q 020110           77 AVEG-CKGVFHVASPC   91 (331)
Q Consensus        77 ~~~~-~d~vih~a~~~   91 (331)
                      .+++ +|.||...|..
T Consensus        68 ~~~~~~d~vv~spgi~   83 (451)
T 3lk7_A           68 LLDEDFCYMIKNPGIP   83 (451)
T ss_dssp             GGGSCEEEEEECTTSC
T ss_pred             hhcCCCCEEEECCcCC
Confidence            3455 89999887763

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.43  E-value=0.0037  Score=53.08  Aligned_cols=66  Identities=21%  Similarity=0.302  Sum_probs=50.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +|+||-++|- |-.|+.+++.|++.|| +|++.+|++.....+...      ++..       .++..++.+++|+||-|
T Consensus         2 ~M~kIgfIGl-G~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~~------Ga~~-------a~s~~e~~~~~dvv~~~   66 (300)
T 3obb_A            2 HMKQIAFIGL-GHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAA------GASA-------ARSARDAVQGADVVISM   66 (300)
T ss_dssp             -CCEEEEECC-STTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHT------TCEE-------CSSHHHHHTTCSEEEEC
T ss_pred             CcCEEEEeee-hHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHc------CCEE-------cCCHHHHHhcCCceeec
Confidence            4889999995 9999999999999999 999999987766655543      2221       23455677788888866


Q ss_pred             c
Q 020110           88 A   88 (331)
Q Consensus        88 a   88 (331)
                      -
T Consensus        67 l   67 (300)
T 3obb_A           67 L   67 (300)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=96.41  E-value=0.0096  Score=51.23  Aligned_cols=93  Identities=23%  Similarity=0.168  Sum_probs=52.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCC--EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +||.|.||+|.+|+.+++.|.+.++.  .+..+.........+. +   .+..+.+...|   ++.    + ++|+||-+
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~-~---~g~~i~v~~~~---~~~----~-~~DvV~~a   68 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLA-F---RGEEIPVEPLP---EGP----L-PVDLVLAS   68 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEE-E---TTEEEEEEECC---SSC----C-CCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEE-E---cCceEEEEeCC---hhh----c-CCCEEEEC
Confidence            37999999999999999999977761  2222221111111110 0   00023333333   221    3 89999988


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccc
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~  133 (331)
                      .+..                  .+...+....+.|+ ++|-.|+.+
T Consensus        69 ~g~~------------------~s~~~a~~~~~~G~-~vId~s~~~   95 (331)
T 2yv3_A           69 AGGG------------------ISRAKALVWAEGGA-LVVDNSSAW   95 (331)
T ss_dssp             SHHH------------------HHHHHHHHHHHTTC-EEEECSSSS
T ss_pred             CCcc------------------chHHHHHHHHHCCC-EEEECCCcc
Confidence            7631                  13345555556676 578778763

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.40  E-value=0.00087  Score=56.56  Aligned_cols=38  Identities=16%  Similarity=0.212  Sum_probs=33.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS   48 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~   48 (331)
                      +++|.|+|+ |.+|+.++..|.+.|+ +|++.+|++....
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~-~V~l~d~~~~~~~   41 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGF-AVTAYDINTDALD   41 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-eEEEEeCCHHHHH
Confidence            579999986 9999999999999999 9999988765433

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.40  E-value=0.017  Score=49.49  Aligned_cols=109  Identities=13%  Similarity=0.138  Sum_probs=67.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhc-C---CCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA-L---PGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~-~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      |+|.|+|+ |.+|+.++..|+..|+ .+|+++++++........ +   ..... ...+..   .+.    +.++++|+|
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~-~~~i~~---~d~----~~~~~aDvV   71 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTR-RANIYA---GDY----ADLKGSDVV   71 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSC-CCEEEE---CCG----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcC-CcEEEe---CCH----HHhCCCCEE
Confidence            48999998 9999999999999874 378988887543222110 0   00000 112221   232    246889999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCE-EEEe
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVT  129 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~  129 (331)
                      |-+++....  ......+....|......+++.+.+...+. +|.+
T Consensus        72 iiav~~~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~  115 (319)
T 1a5z_A           72 IVAAGVPQK--PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (319)
T ss_dssp             EECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Confidence            998875432  112245677888888888888887664443 4443

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.40  E-value=0.0096  Score=49.51  Aligned_cols=56  Identities=13%  Similarity=0.121  Sum_probs=46.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ..+++++|.|++|.+|+.++..|+..|. +|+...|..                           ..+.+.++++|+||.
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t---------------------------~~L~~~~~~ADIVI~  210 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFT---------------------------TDLKSHTTKADILIV  210 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------------SSHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------------hhHHHhcccCCEEEE
Confidence            3568999999999999999999999999 998875431                           135677899999999


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      ..+.
T Consensus       211 Avg~  214 (285)
T 3l07_A          211 AVGK  214 (285)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8874

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=96.40  E-value=0.0048  Score=55.01  Aligned_cols=76  Identities=14%  Similarity=0.106  Sum_probs=51.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEE-------------ccCCCchHH
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE-------------ADVLDSGAV   74 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------------~Dl~~~~~~   74 (331)
                      +|.+|.|.|. |++|..++..|.+.|+ +|++++.++.....+..-      ...+.+             +.++-..+.
T Consensus        20 ~m~~IaViGl-GYVGLp~A~~~A~~G~-~V~g~Did~~kV~~ln~G------~~pi~Epgl~ell~~~~~~g~l~~tt~~   91 (444)
T 3vtf_A           20 HMASLSVLGL-GYVGVVHAVGFALLGH-RVVGYDVNPSIVERLRAG------RPHIYEPGLEEALGRALSSGRLSFAESA   91 (444)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTT------CCSSCCTTHHHHHHHHHHTTCEEECSSH
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHCC------CCCCCCCCHHHHHHHHHHcCCeeEEcCH
Confidence            5789999985 9999999999999999 999998876655544331      011111             111112234


Q ss_pred             HHHhcCccEEEEcccCC
Q 020110           75 SRAVEGCKGVFHVASPC   91 (331)
Q Consensus        75 ~~~~~~~d~vih~a~~~   91 (331)
                      .+.+.++|++|-+.+..
T Consensus        92 ~~ai~~ad~~~I~VpTP  108 (444)
T 3vtf_A           92 EEAVAATDATFIAVGTP  108 (444)
T ss_dssp             HHHHHTSSEEEECCCCC
T ss_pred             HHHHhcCCceEEEecCC
Confidence            45667789999887654

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.39  E-value=0.016  Score=50.56  Aligned_cols=96  Identities=11%  Similarity=0.113  Sum_probs=54.2

Q ss_pred             CCeEEEeCcchHHHHHHHH-HHHHCCC--CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVK-TLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~-~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .++|.|.||||++|+.|++ .|.+..+  .++..++.+ +.-..+..+.+.   ...  .-+..+++    .+.++|+||
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~~~---~~~--v~~~~~~~----~~~~vDvvf   73 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFAKN---ETT--LKDATSID----DLKKCDVII   73 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTCCS---CCB--CEETTCHH----HHHTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcCCC---ceE--EEeCCChh----HhcCCCEEE
Confidence            3589999999999999999 5555442  266655433 211111112110   111  12232322    246899999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCcc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSI  132 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~  132 (331)
                      -+.+..                  .+..++..+.+.|++ ++|=.||.
T Consensus        74 ~a~~~~------------------~s~~~~~~~~~~G~k~~VID~ss~  103 (377)
T 3uw3_A           74 TCQGGD------------------YTNDVFPKLRAAGWNGYWIDAASS  103 (377)
T ss_dssp             ECSCHH------------------HHHHHHHHHHHTTCCSEEEECSST
T ss_pred             ECCChH------------------HHHHHHHHHHHCCCCEEEEeCCcc
Confidence            886531                  133566666677874 67766664

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=96.39  E-value=0.00099  Score=61.33  Aligned_cols=73  Identities=18%  Similarity=0.072  Sum_probs=45.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.++++|||| |.+|+.++..|.+.|. +|++..|+......+.+....   .+  +  ++.+.+.+  ....+|++||+
T Consensus       363 ~~k~vlV~Ga-GGig~aia~~L~~~G~-~V~i~~R~~~~a~~la~~~~~---~~--~--~~~dl~~~--~~~~~DilVN~  431 (523)
T 2o7s_A          363 ASKTVVVIGA-GGAGKALAYGAKEKGA-KVVIANRTYERALELAEAIGG---KA--L--SLTDLDNY--HPEDGMVLANT  431 (523)
T ss_dssp             ---CEEEECC-SHHHHHHHHHHHHHCC--CEEEESSHHHHHHHHHHTTC----C--E--ETTTTTTC----CCSEEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCC---ce--e--eHHHhhhc--cccCceEEEEC
Confidence            3468999999 7999999999999999 999999976544433322110   11  1  12221111  12358999999


Q ss_pred             ccCC
Q 020110           88 ASPC   91 (331)
Q Consensus        88 a~~~   91 (331)
                      ++..
T Consensus       432 agvg  435 (523)
T 2o7s_A          432 TSMG  435 (523)
T ss_dssp             SSTT
T ss_pred             CCCC
Confidence            9863

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.39  E-value=0.0037  Score=50.40  Aligned_cols=72  Identities=19%  Similarity=0.169  Sum_probs=50.4

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      +.+.+.++|||+|| |-+|...++.|++.|. +|++++.+..  ..+..+... + +++++..+...     ..++++|.
T Consensus        26 fl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA-~VtVvap~~~--~~l~~l~~~-~-~i~~i~~~~~~-----~dL~~adL   94 (223)
T 3dfz_A           26 MLDLKGRSVLVVGG-GTIATRRIKGFLQEGA-AITVVAPTVS--AEINEWEAK-G-QLRVKRKKVGE-----EDLLNVFF   94 (223)
T ss_dssp             EECCTTCCEEEECC-SHHHHHHHHHHGGGCC-CEEEECSSCC--HHHHHHHHT-T-SCEEECSCCCG-----GGSSSCSE
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEECCCCC--HHHHHHHHc-C-CcEEEECCCCH-----hHhCCCCE
Confidence            33556789999998 9999999999999999 9998865432  223222211 1 57777766643     23577898


Q ss_pred             EEE
Q 020110           84 VFH   86 (331)
Q Consensus        84 vih   86 (331)
                      ||=
T Consensus        95 VIa   97 (223)
T 3dfz_A           95 IVV   97 (223)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            883

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.39  E-value=0.0033  Score=51.70  Aligned_cols=37  Identities=16%  Similarity=0.214  Sum_probs=32.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (331)
                      .+++|.|+| +|.+|+.+++.|.+.|+ +|++.+|++..
T Consensus        18 ~~~kIgiIG-~G~mG~alA~~L~~~G~-~V~~~~r~~~~   54 (245)
T 3dtt_A           18 QGMKIAVLG-TGTVGRTMAGALADLGH-EVTIGTRDPKA   54 (245)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEEESCHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCC-EEEEEeCChhh
Confidence            457999998 59999999999999999 99999987654

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.38  E-value=0.0083  Score=49.85  Aligned_cols=65  Identities=12%  Similarity=0.063  Sum_probs=48.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      .++++|+|+ |..|+.++..|.+.|. +|++..|+..+...+.++      ++...  ++.+.       .++|+||++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~------~~~~~--~~~~l-------~~~DiVInaT  180 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRL------GCDCF--MEPPK-------SAFDLIINAT  180 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHH------TCEEE--SSCCS-------SCCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC------CCeEe--cHHHh-------ccCCEEEEcc
Confidence            579999997 9999999999999997 999999988776555422      23332  22221       2789999986


Q ss_pred             cC
Q 020110           89 SP   90 (331)
Q Consensus        89 ~~   90 (331)
                      ..
T Consensus       181 p~  182 (269)
T 3phh_A          181 SA  182 (269)
T ss_dssp             TT
T ss_pred             cC
Confidence            54

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.36  E-value=0.034  Score=51.84  Aligned_cols=103  Identities=18%  Similarity=0.148  Sum_probs=67.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--------------------C-CCCcEEEEEccC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--------------------A-GDANLRVFEADV   68 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--------------------~-~~~~~~~~~~Dl   68 (331)
                      .+|+|.|+ |.+|+++++.|...|..++++++.+.-...++.+..-                    . ...+++.+..++
T Consensus        18 s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~~~i   96 (640)
T 1y8q_B           18 GRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDSI   96 (640)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEESCT
T ss_pred             CeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEeccc
Confidence            58999998 8899999999999998789998886544444433210                    0 112466666777


Q ss_pred             CCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           69 LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        69 ~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      .+......++.++|+||.+...                 +..-..+.++|...+++ +|+.++
T Consensus        97 ~~~~~~~~~~~~~DlVvda~Dn-----------------~~aR~~ln~~c~~~~iP-lI~~g~  141 (640)
T 1y8q_B           97 MNPDYNVEFFRQFILVMNALDN-----------------RAARNHVNRMCLAADVP-LIESGT  141 (640)
T ss_dssp             TSTTSCHHHHTTCSEEEECCSC-----------------HHHHHHHHHHHHHHTCC-EEEEEE
T ss_pred             chhhhhHhhhcCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCC-EEEEEE
Confidence            5433224567888999976321                 12233566677777754 676544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	331
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-34
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	4e-33
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-30
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-29
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-28
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	7e-22
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	8e-22
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	3e-21
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-20
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	9e-20
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-19
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	7e-16
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	4e-15
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	5e-15
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-14
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	5e-12
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	7e-12
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	5e-11
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-10
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-10
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	5e-10
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-09
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	8e-08
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	1e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	5e-07
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-06
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-06
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	5e-06
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-06
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	9e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	2e-05
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-05
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	4e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-05
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	4e-05
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	6e-05
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	7e-05
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	8e-05
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	9e-05
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-04
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-04
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-04
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	3e-04
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-04
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	6e-04
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-04
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	7e-04
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	8e-04
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	0.001
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	0.001
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	0.002
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	0.002

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score =  125 bits (314), Expect = 5e-34
 Identities = 78/344 (22%), Positives = 130/344 (37%), Gaps = 28/344 (8%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAG--D 58
           + +    E   V VTGANGF+ + +V+ LL++ Y  +  T    S  ++L     A    
Sbjct: 3   IDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYK-VRGTARSASKLANLQKRWDAKYPG 61

Query: 59  ANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA 118
                   D+L  GA    ++G  GV H+AS  +  +  D       PA+ GTLN L AA
Sbjct: 62  RFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVT---PAIGGTLNALRAA 118

Query: 119 -KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP-----------V 166
                V+R V+TSS  + +        ++ +    +LE     K                
Sbjct: 119 AATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAA 178

Query: 167 SKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNA--SCAVLQQLLQGSKDTQE 222
           SKT AE AAW+F +++     + A+ P   +G +  P   +  +   +  L  G      
Sbjct: 179 SKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL 238

Query: 223 --YHWLGAVPVKDVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVHRF 279
                   V   D+    +     P    R    T G + +        KL+P       
Sbjct: 239 ALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPAD 298

Query: 280 DGETQPGL--IPCKDAAKRLMDLG-LVFTPVEDAVRETVESLKA 320
             +    L       + + L  LG   +  +E+++++ V S  A
Sbjct: 299 FPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSETA 342

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 4e-33
 Identities = 65/320 (20%), Positives = 119/320 (37%), Gaps = 26/320 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TG  GF+G+ L   L+ + +       F      ++      G  N  +   DV++ 
Sbjct: 4   ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW--IGHENFELINHDVVE- 60

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
                       ++H+ASP +  + +    + +     GTLN+L  AKR G  R+++ S+
Sbjct: 61  ----PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAST 115

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
            S +  +P  +     E  W  +     R   Y   K +AE   + + ++ GV+V     
Sbjct: 116 -SEVYGDP--EVHPQSEDYWGHVNPIGPR-ACYDEGKRVAETMCYAYMKQEGVEVRVARI 171

Query: 192 ATCLGPLMQP-YLNASCAVLQQLLQGSK------DTQEYHWLGAVPVKDVAKAQVLLFES 244
               GP M           + Q LQG         +Q   +     V D+    V L  S
Sbjct: 172 FNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQ---YVSDLVNGLVALMNS 228

Query: 245 PAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCK--DAAKRLMDLGL 302
             +S   L     +   +FA+ +  L       +F  E        +  D  K  + LG 
Sbjct: 229 NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSE-AQDDPQKRKPDIKKAKLMLGW 287

Query: 303 V-FTPVEDAVRETVESLKAK 321
               P+E+ + + +   + +
Sbjct: 288 EPVVPLEEGLNKAIHYFRKE 307

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  116 bits (290), Expect = 1e-30
 Identities = 66/320 (20%), Positives = 104/320 (32%), Gaps = 28/320 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-----SSHLFALPGAGDANLRVFEA 66
           + VTG  GFIG+  V+ LL   Y  + A      D      +     P   D  LR    
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ D+G ++R + G   + H A+   ++  +          VQGT  +L+ A   GV RV
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V  S+              + E+S  +          Y  SK  ++  A  +   +G+DV
Sbjct: 123 VHVSTNQVYGSIDSGS---WTESSPLEPNSP------YAASKAGSDLVARAYHRTYGLDV 173

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT------QEYHWLGAVPVKDVAKAQVL 240
                    GP   P        +  LL G              W   V   D  +   L
Sbjct: 174 RITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREW---VHTDDHCRGIAL 229

Query: 241 LFESPAASGRYL--CTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCK-DAAKRL 297
           +     A   Y       +         +  L  ++   R   + +   +    D  K  
Sbjct: 230 VLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIE 289

Query: 298 MDLGLV-FTPVEDAVRETVE 316
            +LG        D +  TV 
Sbjct: 290 RELGYRPQVSFADGLARTVR 309

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  114 bits (285), Expect = 1e-29
 Identities = 62/335 (18%), Positives = 116/335 (34%), Gaps = 35/335 (10%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLD 70
           + +TG  GFIG+ +V+ ++ N   ++   +   + + +L +L   +         AD+ D
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTV-VNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV----- 123
           S  ++R  E  +   V H+A+   ++  +      I   + GT  +LE A+++       
Sbjct: 62  SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121

Query: 124 ----RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEF 178
                R    S+       P         T     E         Y  SK  ++     +
Sbjct: 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAW 181

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK------DTQEYHWLGAVPVK 232
              +G+  +  + +   GP   P       V+   L+G          Q   W   + V+
Sbjct: 182 RRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDW---LYVE 237

Query: 233 DVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCK 291
           D A+A  ++     A   Y +  +   +  D    +  L  E          Q   +  +
Sbjct: 238 DHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADR 297

Query: 292 ---------DAAKRLMDLGLV-FTPVEDAVRETVE 316
                    DA K   +LG       E  +R+TVE
Sbjct: 298 PGHDRRYAIDAGKISRELGWKPLETFESGIRKTVE 332

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  111 bits (277), Expect = 2e-28
 Identities = 47/294 (15%), Positives = 97/294 (32%), Gaps = 26/294 (8%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSIN----ATVFPGSDSSHLFALPGAGDANLRVFEA 66
              +TG  G  G++L + LL+  Y        A+ F      H++  P   +    +   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 67  DVLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ D+  ++R +   +   V+++ +   +    +  +        GTL +LEA +  G+ 
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 125 ---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
              R    S+ S +            ET+             Y V+K  A      + E 
Sbjct: 123 KKTRFYQAST-SELYGLVQEIP--QKETTPFYPRSP------YAVAKLYAYWITVNYRES 173

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDV 234
           +G+            P  +     +  + + +   ++  +   +LG           KD 
Sbjct: 174 YGMYACNGILFNHESPR-RGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDY 232

Query: 235 AKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLI 288
            K Q ++ +        + T   Y    F E  +            G  + G++
Sbjct: 233 VKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIV 286

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 91.9 bits (227), Expect = 7e-22
 Identities = 51/331 (15%), Positives = 100/331 (30%), Gaps = 52/331 (15%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V + G  G +G+ + + L       +         +                 E ++LDS
Sbjct: 5   VFIAGHRGMVGSAIRRQLEQRGDVEL------VLRTRD---------------ELNLLDS 43

Query: 72  GAVSRAVEGCK--GVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
            AV       +   V+  A+    +        + I   +    N++ AA +  V +++ 
Sbjct: 44  RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 103

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
             S S I P    +     E     LE        Y ++K    K    +  ++G D  +
Sbjct: 104 LGS-SCIYPKLAKQPMAESELLQGTLEPTNE---PYAIAKIAGIKLCESYNRQYGRDYRS 159

Query: 189 IHPATCLGPLMQPYLNASCAVLQ--------------QLLQGSKDTQEYHWLGAVPVKDV 234
           + P    GP    + + S  +                 ++     T    +L    +   
Sbjct: 160 VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA 219

Query: 235 AKAQVLLFESPAASGRYLCTNGI-------YQFGDFAERVSKLFPEFPVHRFDGETQPGL 287
           +   + L             + I           + A+ ++K+        FD  ++P  
Sbjct: 220 SIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFD-ASKPDG 278

Query: 288 IPCKDA-AKRLMDLGLV-FTPVEDAVRETVE 316
            P K     RL  LG      +E  +  T +
Sbjct: 279 TPRKLLDVTRLHQLGWYHEISLEAGLASTYQ 309

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.3 bits (228), Expect = 8e-22
 Identities = 59/345 (17%), Positives = 111/345 (32%), Gaps = 52/345 (15%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS----SHLFALPGAG-DANLRVFEADV 68
           +TG  G  G++L + LL+  Y          S +     HL+  P A  + N+++   D+
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 69  LDSGAVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
            DS  + + +   K   ++++ +   ++   D  +        GTL +L+A K  G+   
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125

Query: 127 V--VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
           V    +S S +            ET+             Y  +K  A      F E + +
Sbjct: 126 VKFYQASTSELYGKVQEIP--QKETTPFYPRSP------YGAAKLYAYWIVVNFREAYNL 177

Query: 185 DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDVAKA 237
             V         P        +  + + + +      E   LG           KD  +A
Sbjct: 178 FAVNGILFNHESPRRGANF-VTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA 236

Query: 238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCK------ 291
             L+ ++       + T  ++   +F E+      +  V     E + G           
Sbjct: 237 MWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVT 296

Query: 292 ----------------DAAKRLMDLGLVFTP---VEDAVRETVES 317
                           D  K    L   + P    ++ VRE V +
Sbjct: 297 VDLKYYRPTEVDFLQGDCTKAKQKLN--WKPRVAFDELVREMVHA 339

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 90.8 bits (224), Expect = 3e-21
 Identities = 48/317 (15%), Positives = 101/317 (31%), Gaps = 24/317 (7%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TGA GFI + + + L    +  I +        +                  D+   
Sbjct: 18  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDM-------FCDEFHLVDLRVM 70

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELIL-PAVQGTLNVLEAAKRFGVRRVVVTS 130
               +  EG   VF++A+       +     +I+      + N++EAA+  G++R    S
Sbjct: 71  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 130

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S + I P              +D    + +   + + K   E+    + +  G++     
Sbjct: 131 S-ACIYPEFKQLETTNVSLKESDAWPAEPQ-DAFGLEKLATEELCKHYNKDFGIECRIGR 188

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-------VPVKDVAKAQVLLFE 243
                GP          A      +    T  +   G          + +  +  + L +
Sbjct: 189 FHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK 248

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLF-PEFPVHRFDGETQPGLIPCK--DAAKRLMDL 300
           S       + ++ +    + AE V      + P+H   G   P  +  +  D       L
Sbjct: 249 SDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG---PEGVRGRNSDNNLIKEKL 305

Query: 301 GLV-FTPVEDAVRETVE 316
           G      +++ +R T  
Sbjct: 306 GWAPNMRLKEGLRITYF 322

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 88.5 bits (218), Expect = 2e-20
 Identities = 48/319 (15%), Positives = 100/319 (31%), Gaps = 17/319 (5%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + VTG  GFIG+  V  + +N+       +   + + +   L       + +   D+ D
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-----AKRFGVRR 125
           +  V +       + H A+    ++ ++     I     GT  +LEA      +   V  
Sbjct: 64  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
             V   +      PG      ++ +        S    Y  +K  ++     +    GV 
Sbjct: 124 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS---PYSSTKAASDLIVKAWVRSFGVK 180

Query: 186 VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVLLF 242
               + +   GP           +   +L G K     +  +    +   D +     + 
Sbjct: 181 ATISNCSNNYGPYQHIEKFIPRQIT-NILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAIL 239

Query: 243 ESPAASG-RYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIP--CKDAAKRLMD 299
                     +  +G     +  E + +   +          + G       DA+K   +
Sbjct: 240 TKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDE 299

Query: 300 LGLV--FTPVEDAVRETVE 316
           LG    FT   + + ET++
Sbjct: 300 LGWTPQFTDFSEGLEETIQ 318

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 86.2 bits (212), Expect = 9e-20
 Identities = 64/326 (19%), Positives = 108/326 (33%), Gaps = 22/326 (6%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTG +G+IG+     LL N +  I       S  S L  +   G  +    E D+ + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 72  GAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             ++  +       V H A    + + V    E     V GTL ++ A +   V+  + +
Sbjct: 63  ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFS 122

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK-TLAEKAAWEFAEKHGVDVVA 188
           SS +     P         T      Y KS+     +       +  W  A     + V 
Sbjct: 123 SSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVG 182

Query: 189 IHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-----------VPVKDVAKA 237
            HP+  +G   Q   N     + Q+  G +D+                   + V D+A  
Sbjct: 183 AHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADG 242

Query: 238 QVLLFESPAASGRYLCTN----GIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCK-- 291
            V+  E  A        N          D     SK   +   + F    + G +P    
Sbjct: 243 HVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFA-PRREGDLPAYWA 301

Query: 292 DAAKRLMDLGLV-FTPVEDAVRETVE 316
           DA+K   +L       +++  ++T  
Sbjct: 302 DASKADRELNWRVTRTLDEMAQDTWH 327

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 85.4 bits (210), Expect = 1e-19
 Identities = 57/324 (17%), Positives = 109/324 (33%), Gaps = 29/324 (8%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +  VTG  G  G +L K LL+  Y          SD+       G  + +++  + D+ D
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMAD 60

Query: 71  SGAVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           + +V RAV   +   V+++A+   +    +      +    G  ++LEA ++F       
Sbjct: 61  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFY 120

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
            +S S +        +  DE +          +  Y V+K         + E  G+   +
Sbjct: 121 QASTSEMFGLIQA--ERQDENTPFY------PRSPYGVAKLYGHWITVNYRESFGLHASS 172

Query: 189 IHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-------VPVKDVAKAQVLL 241
                   PL       +  V   + +     Q+   LG            D  +A  L+
Sbjct: 173 GILFNHESPLRGIE-FVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLM 231

Query: 242 FESPAASGRYLCTNG---IYQFGDFAERVSKLFPEFPVHRFDGETQPGLIP--CKDAAKR 296
            +   A    + T     +      A     L     +       +P  +     + AK 
Sbjct: 232 LQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKA 291

Query: 297 LMDLGLVFTP---VEDAVRETVES 317
              LG  + P   +++ +R  VE+
Sbjct: 292 QRVLG--WKPRTSLDELIRMMVEA 313

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 75.0 bits (183), Expect = 7e-16
 Identities = 57/328 (17%), Positives = 102/328 (31%), Gaps = 33/328 (10%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL----PGAGDANLRVFEA 66
              +TG  GFIG+ L++TLL  +   +    F      +L  +         +N +  + 
Sbjct: 18  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 77

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ +    + A  G   V H A+  ++   ++         + G LN+L AA+   V+  
Sbjct: 78  DIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSF 137

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
              +S S    +PG       E +             Y V+K + E  A  F+  +G   
Sbjct: 138 TYAASSSTYGDHPGLP---KVEDTIGKPLSP------YAVTKYVNELYADVFSRCYGFST 188

Query: 187 VAIHPATCLGPLMQP---YLNASCAVLQQLLQGSK-----DTQEYHWLGAVPVKDVAKAQ 238
           + +      G    P   Y          ++QG       D +       +     A   
Sbjct: 189 IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLL 248

Query: 239 VLLFESPAASGRYLCTNG-IYQFGDFAERVSKLFPE----FPVHRFDGETQPGLIPCK-- 291
                  A +  Y    G           +     E    +       + + G +     
Sbjct: 249 AATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLA 308

Query: 292 DAAKRLMDLGLVFTP---VEDAVRETVE 316
           D +K    LG  + P   V   V   + 
Sbjct: 309 DISKAAKLLG--YAPKYDVSAGVALAMP 334

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 72.8 bits (177), Expect = 4e-15
 Identities = 49/336 (14%), Positives = 103/336 (30%), Gaps = 36/336 (10%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFALPGAGDANLRVFEADVLD 70
           + +TG  GF+G+ L    L      I          + +L  L   G  N      D+ +
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG--NFEFVHGDIRN 60

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
              V+R +        FH+A    +   +D         V GTLN+LEA +++     ++
Sbjct: 61  KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP--------VSKTLAEKAAWEFAE 180
            SS + +  +         ET +T ++      +            SK  A++   ++A 
Sbjct: 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 180

Query: 181 KHGVDVVAIHPATCLG-----PLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-----VP 230
             G++ V    ++  G        Q ++   C    ++  G          G      + 
Sbjct: 181 IFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240

Query: 231 VKDVAKAQVLLFESPAASG-----RYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQP 285
            +D+         + +                    +  + +                + 
Sbjct: 241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNL-PVRE 299

Query: 286 GLIPCK--DAAKRLMDLGLVFTP---VEDAVRETVE 316
                   D  K    +   ++P    +D V++  +
Sbjct: 300 SDQRVFVADIKKITNAID--WSPKVSAKDGVQKMYD 333

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 72.4 bits (176), Expect = 5e-15
 Identities = 49/345 (14%), Positives = 97/345 (28%), Gaps = 40/345 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSIN----ATVFPGSDSSHLFALP-GAGDANLRVFE 65
              +TG  G  G++L + LL   Y        ++ F     +H++  P     A +++  
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 66  ADVLDSGAVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           AD+ D+ ++ R ++  K   V+++A+   +    +           G L +LEA +   +
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI 122

Query: 124 RRVVVTSSISAIVPNPG-WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
                     A              ET+        +  K        A      + E +
Sbjct: 123 DSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCA------AHWYTVNYREAY 176

Query: 183 GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE------YHWLGAVPVKDVAK 236
           G+            P                        +                D  +
Sbjct: 177 GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 236

Query: 237 AQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFD---GETQPGLIPCK-- 291
           A  L+ +        + T   +   +F +              +      +P  +     
Sbjct: 237 AMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQG 296

Query: 292 DAAKRLMDLGLVFTP---VEDAVRETVES----------LKAKGF 323
           DA+K    LG  + P    E  V+  V+           L   G+
Sbjct: 297 DASKAKEVLG--WKPQVGFEKLVKMMVDEDLELAKREKVLVDAGY 339

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 71.2 bits (173), Expect = 1e-14
 Identities = 51/337 (15%), Positives = 104/337 (30%), Gaps = 34/337 (10%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTG  G+IG+  V  L++N Y  + A     S    +  L      ++  +E D+ D
Sbjct: 3   IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 62

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
              + +  +  K   V H A    + +            + GT+ +LE  +++ V + V 
Sbjct: 63  RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVF 122

Query: 129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKK----WYPVSKTLAEKAAWEFAEKHG 183
           +SS +       +   +   E             K            ++K +W+FA    
Sbjct: 123 SSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRY 182

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-------------------DTQEYH 224
            + +  HP+  +G       N     + Q+  G +                   D     
Sbjct: 183 FNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVV 242

Query: 225 WLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQ 284
            L    +  +   +             L +       +      K       ++  G  +
Sbjct: 243 DLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGR-R 301

Query: 285 PGLIPCK--DAAKRLMDLGLVFTP---VEDAVRETVE 316
            G +        +   +L   +     VED+ ++  +
Sbjct: 302 AGDVLNLTAKPDRAKRELK--WQTELQVEDSCKDLWK 336

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 63.9 bits (154), Expect = 5e-12
 Identities = 42/314 (13%), Positives = 84/314 (26%), Gaps = 39/314 (12%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           ++++T+ V GA G  G  L++      +  + A V        L A       N+ +F+ 
Sbjct: 1   QQKKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVH---SLKGLIAEELQAIPNVTLFQG 56

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
            +L++  +   +     +  + +     D            +    ++ +AAKR G  + 
Sbjct: 57  PLLNNVPLMDTLFEGAHLAFINTTSQAGDE-----------IAIGKDLADAAKRAGTIQH 105

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
            + SS+        W         +T   Y +      P +   A      F        
Sbjct: 106 YIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQL--GLPSTFVYAGIYNNNFTSLPYPLF 163

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
                         P+                   +          DV  A + +F+   
Sbjct: 164 QMELMPDGTFEWHAPF-----------------DPDIPLPWLDAEHDVGPALLQIFKDGP 206

Query: 247 ASG---RYLCTNGIYQFGDFAERVSKLF-PEFPVHRFDGETQPGLIPCKDAAKRLMDLGL 302
                 R   T             S+         +         IP     ++L  + +
Sbjct: 207 QKWNGHRIALTFETLSPVQVCAAFSRALNRRVTYVQVPKVEIKVNIP-VGYREQLEAIEV 265

Query: 303 VFTPVEDAVRETVE 316
           VF   +       E
Sbjct: 266 VFGEHKAPYFPLPE 279

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 62.9 bits (151), Expect = 7e-12
 Identities = 28/268 (10%), Positives = 64/268 (23%), Gaps = 34/268 (12%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLFALPGAGDANLRVFE 65
            ++  V + G  G+IG  +V   +   + +         S+   +  L        ++ E
Sbjct: 1   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 60

Query: 66  ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
           A + D   +  A++    V    +   L   +              L ++EA K  G  +
Sbjct: 61  ASLDDHQRLVDALKQVDVVISALAGGVLSHHIL-----------EQLKLVEAIKEAGNIK 109

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
             + S                                       + ++      E   + 
Sbjct: 110 RFLPSEFGMDPDIMEH-------------------ALQPGSITFIDKRKVRRAIEAASIP 150

Query: 186 VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP 245
              +      G            ++    +             V   DV    +   + P
Sbjct: 151 YTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP 210

Query: 246 AASGR---YLCTNGIYQFGDFAERVSKL 270
               +         I    +  +   +L
Sbjct: 211 QTLNKTMYIRPPMNILSQKEVIQIWERL 238

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 59.8 bits (143), Expect = 5e-11
 Identities = 42/271 (15%), Positives = 73/271 (26%), Gaps = 30/271 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
           TV VTGA+G  G  + K L + +        V        +            VF  D+ 
Sbjct: 5   TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDIT 57

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPV-DPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           D+ +++ A +G   +  + S      P  DP K      +       E     G +  + 
Sbjct: 58  DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 117

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
            + ++ +                   +        +        + A ++    G     
Sbjct: 118 AAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWK-------RKAEQYLADSGTPYTI 170

Query: 189 IHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
           I     L                +LL G  D         VP  DVA+  +       A 
Sbjct: 171 IRAGGLLDKEGGVR---------ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAK 221

Query: 249 GRYL-----CTNGIYQFGDFAERVSKLFPEF 274
            +                DF    S++   F
Sbjct: 222 NKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 252

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (139), Expect = 1e-10
 Identities = 35/248 (14%), Positives = 62/248 (25%), Gaps = 47/248 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + GA G  G   +   +   Y  +   V   S                 V   DVL 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYE-VTVLVRDSSRLPSEG------PRPAHVVVGDVLQ 57

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
           +  V + V G   V  +            +        +G  N++ A K  GV +VV  +
Sbjct: 58  AADVDKTVAGQDAVIVLLGT-------RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT 110

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S   +                               + T       +   + G+  VA+ 
Sbjct: 111 SAFLLWDPTKV--------------------PPRLQAVTDDHIRMHKVLRESGLKYVAVM 150

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P      +    L  +  V       S           +   D+    +    +    G 
Sbjct: 151 P----PHIGDQPLTGAYTVTLDGRGPS---------RVISKHDLGHFMLRCLTTDEYDGH 197

Query: 251 YLCTNGIY 258
               +  Y
Sbjct: 198 STYPSHQY 205

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (141), Expect = 2e-10
 Identities = 63/342 (18%), Positives = 111/342 (32%), Gaps = 48/342 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSI------NATVFPGSDSSHLFALPGAGDANLRVFE 65
           V VTG  G+IG+  V  LL+  Y  +      NA    GS    L  +      ++   E
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64

Query: 66  ADVLDSGAVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
            D+LD GA+ R  +      V H A    + + V    +     + GT+ +LE  K  GV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           + +V +SS +                   +          Y  SK   E+   +  +   
Sbjct: 125 KNLVFSSSATVYGNPQYLP--------LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADK 176

Query: 184 ---------VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-----QEYHWLGAV 229
                     +    H + C+G   Q   N     + Q+  G ++       +Y      
Sbjct: 177 TWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236

Query: 230 PVKDVAKAQVLLFESPAASGRYLCTNG--IYQFG--------DFAERVSKLFPEFPVHRF 279
            V+D      L     AA  +     G  IY  G           + + K   +   ++ 
Sbjct: 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296

Query: 280 DGETQPGLIPCK--DAAKRLMDLGLVFTP---VEDAVRETVE 316
               + G +     + +    +LG  +T    ++    +   
Sbjct: 297 V-ARREGDVAACYANPSLAQEELG--WTAALGLDRMCEDLWR 335

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 57.6 bits (137), Expect = 5e-10
 Identities = 47/325 (14%), Positives = 84/325 (25%), Gaps = 23/325 (7%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTG  GF G WL   L     T    ++   +  S            ++    D+ D
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRD 67

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAV--QGTLNVLEAAKRFGVRRVVV 128
              +  ++   +              +   + +   +    GT+ +LEA +  G  + VV
Sbjct: 68  QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVV 127

Query: 129 TSSISAIVPNPGWKGKVFDETSW--TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
             +      N  W     +  +    D             S             +HG  V
Sbjct: 128 NITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAV 187

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW----------LGAVPVKDVAK 236
             +     +G            +L+   Q                      +  +    K
Sbjct: 188 ATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQK 247

Query: 237 AQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIP--CKDAA 294
                 E                  +  E++ K + E    + DG   P        D +
Sbjct: 248 LYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCS 307

Query: 295 KRLMDLGLVFTP---VEDAVRETVE 316
           K  M LG  + P   +   +   V 
Sbjct: 308 KAKMQLG--WHPRWNLNTTLEYIVG 330

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 54.4 bits (129), Expect = 4e-09
 Identities = 32/264 (12%), Positives = 66/264 (25%), Gaps = 41/264 (15%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFP--GSDSSHLFALPGAGDANLRVFEADVL 69
           + + GA G+IG  + K  LD  + +          S+S     L     +   +    + 
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID 65

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           D  ++  AV+    V                       ++  +N+++A K  G  +    
Sbjct: 66  DHASLVEAVKNVDVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP 110

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           S            G   D     +        K                 E  G+    +
Sbjct: 111 SEF----------GNDVDNVHAVEPAKSVFEVKAKV----------RRAIEAEGIPYTYV 150

Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG 249
                 G  ++    A      +  +          +  V  +D+    +   + P    
Sbjct: 151 SSNCFAGYFLRSLAQAGLTAPPR-DKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLN 209

Query: 250 RYLCTNG---IYQFGDFAERVSKL 270
           + L            +      K 
Sbjct: 210 KTLYLRLPANTLSLNELVALWEKK 233

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 51.1 bits (120), Expect = 8e-08
 Identities = 47/364 (12%), Positives = 89/364 (24%), Gaps = 58/364 (15%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYT----------------SINATVFPGSDSSHLFALPG 55
           V V G +G+ G      L   NY                  + +     S    +     
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63

Query: 56  AGDANLRVFEADVLDSGAVSRAVE-----GCKGVFHVASPCTLEDPVDPEKELILPAVQG 110
               ++ ++  D+ D   ++ + +              S                  V G
Sbjct: 64  LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIG 123

Query: 111 TLNVLEAAKRFGVRRVVVTSSISA-----IVPNPGWKGKVFDETSWTDLEYCKSRKKWYP 165
           TLNVL A K FG    +V            +        +        L Y K    +Y 
Sbjct: 124 TLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYH 183

Query: 166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT----- 220
           +SK           +  G+    ++     G              +        T     
Sbjct: 184 LSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRF 243

Query: 221 --------------QEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNG---IYQFGDF 263
                         +     G + ++D  +   +   +PA +G +   N     +   + 
Sbjct: 244 CVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNEL 303

Query: 264 AERVSKLFP----EFPVHRFDGETQPGLIP-CKDAAKRLMDLGLVFTP---VEDAVRETV 315
           A  V+K       +                       +LM+LG    P    +  +   +
Sbjct: 304 ASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELG--LEPHYLSDSLLDSLL 361

Query: 316 ESLK 319
               
Sbjct: 362 NFAV 365

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 49.8 bits (117), Expect = 1e-07
 Identities = 43/314 (13%), Positives = 82/314 (26%), Gaps = 43/314 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TGANG +G  + K L   N   I                         V + D+ + 
Sbjct: 4   ILITGANGQLGREIQKQLKGKNVEVI----------------------PTDVQDLDITNV 41

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
            AV++     K   +V   C     VD  +E    A +      +               
Sbjct: 42  LAVNKFFNEKK--PNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQ 99

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
           IS      G   +   E    + +    + K               F +        +  
Sbjct: 100 ISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLE----------GENFVKALNPKYYIVRT 149

Query: 192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRY 251
           A   G                                    D+A+  + + +       +
Sbjct: 150 AWLYGDGNNFVKTMIN---LGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNYGTFH 206

Query: 252 LCTNGIYQFGDFAERVSKLF-PEFPVHRFDGETQPGLIP-----CKDAAKRLMDLGLVFT 305
               GI  + DFA  + +L   +  V     E  P                 +  G +  
Sbjct: 207 CTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR 266

Query: 306 PVEDAVRETVESLK 319
             +++++E ++ L+
Sbjct: 267 EWKESLKEYIDLLQ 280

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 48.4 bits (113), Expect = 5e-07
 Identities = 50/339 (14%), Positives = 96/339 (28%), Gaps = 43/339 (12%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V + G NGFIG  L + LL  ++  +          S     P     +    E D+   
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHP-----HFHFVEGDISIH 57

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
                     K    V     +  P++  +  +          L   +     R  +   
Sbjct: 58  SEWIEYH--VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFP 115

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
            ++ V          ++ S   +      +  Y VSK L ++  W + EK G+      P
Sbjct: 116 STSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRP 175

Query: 192 ATCLGPLMQPYLNASCAVLQ-------QLLQGSKD------TQEYHWLGAVPVKDVAKAQ 238
              +GP +     A     +        L++GS         Q+  +       +     
Sbjct: 176 FNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI 235

Query: 239 VLLFESPAASGRYLCTNGIYQFG--DFAERVSKLF---------PEFPVHRFDGETQPGL 287
           +    +          N   +    +  E +   F         P F   R    +    
Sbjct: 236 IENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG 295

Query: 288 IPCKDAAKRLMD-------LGLVFTP---VEDAVRETVE 316
              +D   R          L   + P   +++ + ET++
Sbjct: 296 KGYQDVEHRKPSIRNAHRCLD--WEPKIDMQETIDETLD 332

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 37/263 (14%), Positives = 75/263 (28%), Gaps = 39/263 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVL 69
              VTGA   IG    + LL              +      AL            + DV 
Sbjct: 5   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 64

Query: 70  DSGAVSRAVEGCK-------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG 122
           D   +                + + A     ++     +  ++  + GT   L+   +  
Sbjct: 65  DQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQN 124

Query: 123 VR---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA 179
                 ++  SS++ ++P                  YC S+      +++ A   A    
Sbjct: 125 GGEGGIIINMSSLAGLMPVAQQPV------------YCASKHGIVGFTRSAA--LAANLM 170

Query: 180 EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------D 233
              GV + AI P      +++       ++ ++   G     + H    +          
Sbjct: 171 -NSGVRLNAICPGFVNTAILE-------SIEKEENMGQYIEYKDHIKDMIKYYGILDPPL 222

Query: 234 VAKAQVLLFESPAASGRYLCTNG 256
           +A   + L E  A +G  +    
Sbjct: 223 IANGLITLIEDDALNGAIMKITT 245

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 45.1 bits (106), Expect = 4e-06
 Identities = 42/258 (16%), Positives = 74/258 (28%), Gaps = 53/258 (20%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTGA+  IG  +  +L       +         +  +     A       F  DV   
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 72  GAVSRAVE-----------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
             V   ++                        +        E+I   + G     +AA +
Sbjct: 64  ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK 123

Query: 121 FGVR----RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAW 176
             ++    R++  +S+  ++ N G               Y  ++      SKT     A 
Sbjct: 124 IMMKKRKGRIINIASVVGLIGNIGQAN------------YAAAKAGVIGFSKTA----AR 167

Query: 177 EFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK---- 232
           E A    ++V  +                   +   +     +  E   LG +P+     
Sbjct: 168 EGA-SRNINVNVV---------------CPGFIASDMTAKLGEDMEKKILGTIPLGRTGQ 211

Query: 233 --DVAKAQVLLFESPAAS 248
             +VA     L  SPAAS
Sbjct: 212 PENVAGLVEFLALSPAAS 229

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 45.0 bits (104), Expect = 5e-06
 Identities = 43/310 (13%), Positives = 76/310 (24%), Gaps = 12/310 (3%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ +VK L D   T I   V         F      +    + + D L  
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDI--LVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQ 59

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
                     + +FH  +  +  +                L          +  +  +S+
Sbjct: 60  IMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELL--HYCLEREIPFLYASSA 117

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
            +       +      E       Y K     Y         +         V       
Sbjct: 118 ATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGH 177

Query: 192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRY 251
              +  +               L    +  +  +   V V DVA   +   E+  +    
Sbjct: 178 KGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF---VYVGDVADVNLWFLENGVSGIFN 234

Query: 252 LCTNGIYQFGDFAERVSKLFPEFPVH--RFDGETQPGLIP--CKDAAKRLMDLGLV-FTP 306
           L T     F   A+       +  +    F  + +         D            F  
Sbjct: 235 LGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKT 294

Query: 307 VEDAVRETVE 316
           V + V E + 
Sbjct: 295 VAEGVTEYMA 304

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 44.7 bits (105), Expect = 6e-06
 Identities = 37/251 (14%), Positives = 68/251 (27%), Gaps = 26/251 (10%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTGA   IG  +   L       I         +  + A      ++    +A+V  
Sbjct: 20  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV 79

Query: 71  SGAVSRAVEGCK---GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
              + R  E      G   +    +        K++          +    + F  R   
Sbjct: 80  VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAR--- 136

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLAEKAAWEFAEKHG 183
                     +    G++    S T       +   Y  SK    T A   A + A    
Sbjct: 137 ------EAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA-DKK 189

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------DVAKA 237
           + V  + P      +            + L   +++  EY  +   P++      D+A+ 
Sbjct: 190 ITVNVVAPGGIKTDMYHAVCREYIPNGENL--SNEEVDEYAAVQWSPLRRVGLPIDIARV 247

Query: 238 QVLLFESPAAS 248
            V    S    
Sbjct: 248 -VCFLASNDGG 257

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 44.1 bits (103), Expect = 9e-06
 Identities = 35/203 (17%), Positives = 56/203 (27%), Gaps = 27/203 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +V VTGAN  IG  LV+ L+ +        +    D      L    D+ + V    V  
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNI--RHIIATARDVEKATELKSIKDSRVHVLPLTVTC 62

Query: 71  SGAVSRAVE------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNV---------- 114
             ++   V       G  G+  + +   +        E     +   L+V          
Sbjct: 63  DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122

Query: 115 --LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT--- 169
             L   K    +      S+S         G      + +           Y +SK    
Sbjct: 123 KLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQ--FPVLAYRMSKAAIN 180

Query: 170 -LAEKAAWEFAEKHGVDVVAIHP 191
                 A +      V VV   P
Sbjct: 181 MFGRTLAVDLK-DDNVLVVNFCP 202

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 42.8 bits (99), Expect = 2e-05
 Identities = 33/251 (13%), Positives = 61/251 (24%), Gaps = 45/251 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V + GA G  G  L+  +L     +                         +V       
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLA-------------------------KVI------ 32

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             A +R             P      + P+ +  +      L               V  
Sbjct: 33  --APARKALAEHPRLDN--PVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDF 88

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
            +   V     +         + L        +Y   K   E+A  E        +    
Sbjct: 89  DLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQ---LTIAR 145

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P+   GP  +  L    A     +   K          +   D+A+A   L        R
Sbjct: 146 PSLLFGPREEFRLAEILAAPIARILPGK-------YHGIEACDLARALWRLALEEGKGVR 198

Query: 251 YLCTNGIYQFG 261
           ++ ++ + + G
Sbjct: 199 FVESDELRKLG 209

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 33/266 (12%), Positives = 70/266 (26%), Gaps = 52/266 (19%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
              +TG++  IG                T  +A      ++       G  + N+    A
Sbjct: 7   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAE--RLEETRQQILAAGVSEQNVNSVVA 64

Query: 67  DVLDSGAVSRAVEGCK-------GVFHVASPCTLEDPVDPEKELILPAVQGTLNV----- 114
           DV         +            + + A     +          + +   TLN+     
Sbjct: 65  DVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSV 124

Query: 115 -------LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS 167
                  +          V ++S  S +   P +                     +Y ++
Sbjct: 125 IALTKKAVPHLSSTKGEIVNISSIASGLHATPDF--------------------PYYSIA 164

Query: 168 K----TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY 223
           K          A +   +HG+ V +I P           +       ++        +E 
Sbjct: 165 KAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATG-FGSAMGMPEETSKKFYSTMATMKEC 222

Query: 224 HWLGAVP-VKDVAKAQVLLFESPAAS 248
              G +   +D+A+    L +   +S
Sbjct: 223 VPAGVMGQPQDIAEVIAFLADRKTSS 248

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 42.3 bits (99), Expect = 4e-05
 Identities = 34/258 (13%), Positives = 71/258 (27%), Gaps = 38/258 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V    A G IG    + L+  N  +        + ++           N+     DV  
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 71  SGA-----VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
             A     + +  +  K V  + +   + D    E+ + +    G +N   A   F  +R
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAI-NFTGLVNTTTAILDFWDKR 125

Query: 126 -------VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
                  +    S++                      Y  S+      + +LA+ A    
Sbjct: 126 KGGPGGIIANICSVTGFNAIHQVPV------------YSASKAAVVSFTNSLAKLAP--- 170

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQ 238
               GV   +I+P     PL+  + +        +     +    H       +   +  
Sbjct: 171 --ITGVTAYSINPGITRTPLVHTFNSW-----LDVEPRVAELLLSHPTQ--TSEQCGQN- 220

Query: 239 VLLFESPAASGRYLCTNG 256
            +       +G     + 
Sbjct: 221 FVKAIEANKNGAIWKLDL 238

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 42.1 bits (99), Expect = 4e-05
 Identities = 42/267 (15%), Positives = 69/267 (25%), Gaps = 71/267 (26%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
            V VTG    IG  + +             +                  A       F+ 
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-----------GKEVAEAIGGAFFQV 55

Query: 67  DVLDSGAVSRAVEGCKGVFH----------VASPCTLEDPVDPEKELILPA-VQGTLNVL 115
           D+ D     R VE                 +A+P +      PE   +L   +   +++ 
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 116 EAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK--- 168
             A R     G   +V  +S+  +                            Y  SK   
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLFAEQEN--------------------AAYNASKGGL 155

Query: 169 -TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG 227
             L    A + A    + V A+ P       +   +  S            +     W  
Sbjct: 156 VNLTRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALS---------PDPERTRRDWED 205

Query: 228 AVPVK------DVAKAQVLLFESPAAS 248
              ++      +VA+A VL   S  AS
Sbjct: 206 LHALRRLGKPEEVAEA-VLFLASEKAS 231

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 42.2 bits (97), Expect = 4e-05
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 19/71 (26%)

Query: 12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
          + + G  G +G  L ++L                   +L AL    D + + F  D  + 
Sbjct: 3  ILLFGKTGQVGWELQRSLAPVG---------------NLIAL----DVHSKEFCGDFSNP 43

Query: 72 GAVSRAVEGCK 82
            V+  V   +
Sbjct: 44 KGVAETVRKLR 54

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 6e-05
 Identities = 37/217 (17%), Positives = 60/217 (27%), Gaps = 41/217 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V +TGA   IG              +   +             G G A +  F  D  +
Sbjct: 9   IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSN 67

Query: 71  SGAVSRAVEGCK---GVFHVASPCTLEDPVDPEKELILPAVQGTLNV------------L 115
              +  + +  K   G   +                  P ++ T  V            L
Sbjct: 68  REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFL 127

Query: 116 EAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA 175
            A  +     +V  +S +  V  P                YC S+       KTL ++ A
Sbjct: 128 PAMTKNNHGHIVTVASAAGHVSVPFLLA------------YCSSKFAAVGFHKTLTDELA 175

Query: 176 WEFAEKHGVDVVAIHP-----------ATCLGPLMQP 201
               +  GV    + P           +T LGP ++P
Sbjct: 176 AL--QITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEP 210

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 7e-05
 Identities = 42/251 (16%), Positives = 70/251 (27%), Gaps = 44/251 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTGA   IG   V+ L       +          + L +L       +     D+ D
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAV----SRTQADLDSLVRECP-GIEPVCVDLGD 63

Query: 71  SGAVSRAVEGCKGV-------FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA----- 118
             A  RA+     V               LE   +         ++  + V +       
Sbjct: 64  WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLI 123

Query: 119 KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
            R     +V  SS  +                     YC ++     ++K +A     E 
Sbjct: 124 ARGVPGAIVNVSSQCSQRAVTNHSV------------YCSTKGALDMLTKVMAL----EL 167

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-AVPVKDVAKA 237
              H + V A++P   +  + Q   +             K       LG    V+ V  A
Sbjct: 168 G-PHKIRVNAVNPTVVMTSMGQATWSDPHKA--------KTMLNRIPLGKFAEVEHVVNA 218

Query: 238 QVLLFESPAAS 248
            +L   S  + 
Sbjct: 219 -ILFLLSDRSG 228

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 41.1 bits (96), Expect = 8e-05
 Identities = 36/255 (14%), Positives = 73/255 (28%), Gaps = 44/255 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTG    +G  +VK LL           F   + +    L             DV  
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAK----VAFSDINEAAGQQLAAELGERSMFVRHDVSS 63

Query: 71  SGAVSRAVEGCK-------------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
               +  +   +             G+       T     +    L+    +      + 
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRL--EDFSRLLKINTESVFIGCQQ 121

Query: 118 AKRFGVR---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
                      ++  +S+S+ +P   + G            Y  S+     +++      
Sbjct: 122 GIAAMKETGGSIINMASVSSWLPIEQYAG------------YSASKAAVSALTRAA---- 165

Query: 175 AWEFAEK-HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD 233
           A    ++ + + V +IHP     P+MQ  L     V ++++                 + 
Sbjct: 166 ALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK--GVSKEMVLHDPKLNRAGRAYM--PER 221

Query: 234 VAKAQVLLFESPAAS 248
           +A+  VL   S  +S
Sbjct: 222 IAQL-VLFLASDESS 235

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 9e-05
 Identities = 38/256 (14%), Positives = 70/256 (27%), Gaps = 41/256 (16%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAG-DANLRVFEADVL 69
              VTGA+G IG  + + L+      +      G+          AG    L  +  D+ 
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 70  DSGAVSRAVEGCKGVF----------HVASPCTLEDPVDPEKELIL-----PAVQGTLNV 114
           +   +       +              +A P TL        + +           T   
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 131

Query: 115 LEAAKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAE 172
            ++ K   V    ++  +S+S     P                Y  +  K+   + T   
Sbjct: 132 YQSMKERNVDDGHIININSMSGHRVLPLSVTHF----------YSAT--KYAVTALTEGL 179

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK 232
           +     A +  +    I P            +             K    Y  +  +  +
Sbjct: 180 RQELREA-QTHIRATCISPGVVETQFAFKLHDK---------DPEKAAATYEQMKCLKPE 229

Query: 233 DVAKAQVLLFESPAAS 248
           DVA+A V+   S  A 
Sbjct: 230 DVAEA-VIYVLSTPAH 244

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (94), Expect = 1e-04
 Identities = 38/252 (15%), Positives = 64/252 (25%), Gaps = 38/252 (15%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +V + GA+G  G  L+K +L+                                 +  ++ 
Sbjct: 16  SVFILGASGETGRVLLKEILEQGL----------------------------FSKVTLIG 47

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              ++   E  K V          D      +               A   G  RV    
Sbjct: 48  RRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDY 107

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
            + +         K F+  S       KS    Y   K   E    E             
Sbjct: 108 VLKSAELAKAGGCKHFNLLSSKG--ADKSSNFLYLQVKGEVEAKVEELKFDR---YSVFR 162

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P   L    +        ++++      D+  +    +VPV  V +A +     P     
Sbjct: 163 PGVLLCDRQESRPGE--WLVRKFFGSLPDS--WASGHSVPVVTVVRAMLNNVVRPRDKQM 218

Query: 251 YLCTNG-IYQFG 261
            L  N  I+  G
Sbjct: 219 ELLENKAIHDLG 230

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 32/263 (12%), Positives = 72/263 (27%), Gaps = 45/263 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           TV +TG++  IG                T  ++      ++  +    G  +  +    A
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSE--RLEETRQIILKSGVSEKQVNSVVA 64

Query: 67  DVLDSGAVSRAVEGCK-------GVFHVASPCTLEDPVDPEKELILPA--------VQGT 111
           DV       + +            + + A     +       +  +          +Q  
Sbjct: 65  DVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAV 124

Query: 112 LNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS 167
           + + +  K          V V+S ++     P +   ++   +   L+            
Sbjct: 125 IEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDF---LYYAIAKAALD------------ 169

Query: 168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG 227
                  A + A K G+ V ++ P           +       Q+        +E   +G
Sbjct: 170 -QYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNA-MGMPDQASQKFYNFMASHKECIPIG 226

Query: 228 AVP-VKDVAKAQVLLFESPAASG 249
           A    + +A   +L       S 
Sbjct: 227 AAGKPEHIANI-ILFLADRNLSF 248

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 38/259 (14%), Positives = 74/259 (28%), Gaps = 43/259 (16%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V +TG    +G  LV   +                +  L  L      N+     DV  
Sbjct: 7   AVLITGGASGLGRALVDRFVAEGAK----VAVLDKSAERLAELETDHGDNVLGIVGDVRS 62

Query: 71  SGAVSRAVE-------------GCKGVFHVASPCTLEDPVDPE---KELILPAVQGTLNV 114
                +A                  G++  ++          +    E+    V+G ++ 
Sbjct: 63  LEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHA 122

Query: 115 LEAAKRFGVRR---VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLA 171
           ++A     V     V+ T S +   PN G               Y  ++     + + L 
Sbjct: 123 VKACLPALVASRGNVIFTISNAGFYPNGGGPL------------YTAAKHAIVGLVREL- 169

Query: 172 EKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP- 230
              A+E A    V V  +        L  P      +     +  +   +    +G +P 
Sbjct: 170 ---AFELA--PYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPE 224

Query: 231 VKDVAKAQVLLFESPAASG 249
           V++   A  + F +   + 
Sbjct: 225 VEEYTGA-YVFFATRGDAA 242

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 39.4 bits (91), Expect = 3e-04
 Identities = 30/248 (12%), Positives = 63/248 (25%), Gaps = 24/248 (9%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           T  +TG+   IG    +  +               +     A              DV D
Sbjct: 7   TALITGSARGIGRAFAEAYVREGAR----VAIADINLEAARATAAEIGPAACAIALDVTD 62

Query: 71  SGAVSRAVEGCK---GVFHVASPCTLEDPVDPEKELILPAVQGTLNV-LEAAKRFGVRRV 126
             ++ R V       G   +         + P  E+   +      + +           
Sbjct: 63  QASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVA 122

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
               +            +           YC ++     ++++           +HG++V
Sbjct: 123 RAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSA----GLNLI-RHGINV 177

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------DVAKAQVL 240
            AI P    G +   + +   A         +  ++     AVP        D+     +
Sbjct: 178 NAIAP----GVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGM-AI 232

Query: 241 LFESPAAS 248
              +P A 
Sbjct: 233 FLATPEAD 240

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 38.4 bits (89), Expect = 6e-04
 Identities = 40/264 (15%), Positives = 72/264 (27%), Gaps = 59/264 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           T  VTG +  IG  +V+ L     +    +      +  L      G   +     D+  
Sbjct: 10  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSS 68

Query: 71  SGAVSRAVEGCKGVFH-----------VASPCTLEDPVDPEKELILPA-VQGTLNVLEAA 118
                  +      FH           +      +D    +  LI+    +   ++   A
Sbjct: 69  RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLA 128

Query: 119 ----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TL 170
               K      VV  SS+S  +  P                        Y  +K     L
Sbjct: 129 HPFLKASERGNVVFISSVSGALAVPYE--------------------AVYGATKGAMDQL 168

Query: 171 AEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP 230
               A+E+A K  + V  + P      L++  +              +       +    
Sbjct: 169 TRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQD----------PEQKENLNKLIDRCA 217

Query: 231 VK------DVAKAQVLLFESPAAS 248
           ++      ++A   V     PAAS
Sbjct: 218 LRRMGEPKELAAM-VAFLCFPAAS 240

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 6e-04
 Identities = 49/267 (18%), Positives = 83/267 (31%), Gaps = 43/267 (16%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSIN--ATVFPGSDSSHLFALP---GAGDANLRVFEA 66
           V +TG +  IG  L   L  +   S    AT+        L+           +L   + 
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 67  DVLDSGAVSRAVEGCKGVF-------------HVASPCTLEDPVDPEKELILPAVQGTLN 113
           DV DS +V+ A E                           +         ++  V+    
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 114 VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
            L   KR G  RV+VT S+  ++  P                YC S+     + ++LA  
Sbjct: 125 FLPDMKRRGSGRVLVTGSVGGLMGLPFNDV------------YCASKFALEGLCESLA-- 170

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVL--------QQLLQGSKDTQEYHW 225
                    GV +  I         M+  L +   VL         +  Q    +++   
Sbjct: 171 --VLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFR 227

Query: 226 LGAVPVKDVAKAQVLLFESPAASGRYL 252
             A   ++VA+  +    +P  + RY 
Sbjct: 228 EAAQNPEEVAEVFLTALRAPKPTLRYF 254

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 38.6 bits (88), Expect = 7e-04
 Identities = 29/204 (14%), Positives = 61/204 (29%), Gaps = 18/204 (8%)

Query: 12  VCVTGANGFIGTWLVKTLL----------DNNYTSINATVFPGSDSSHLFAL-------P 54
           V V G  G+IG+  V+ LL          D+   +   +    +  +    L       P
Sbjct: 5   VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKP 64

Query: 55  GAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNV 114
              D    +   DV +   ++        +  V   C      +  ++ +       + +
Sbjct: 65  PWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGI 124

Query: 115 LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR-KKWYPVSKTLAEK 173
           L   +   + +       S+               +       K   +  Y  SK +AE+
Sbjct: 125 LRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAER 184

Query: 174 AAWEFAEKHGVDVVAIHPATCLGP 197
              + AE +G+  + +      G 
Sbjct: 185 MIRDCAEAYGIKGICLRYFNACGA 208

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.0 bits (88), Expect = 7e-04
 Identities = 46/251 (18%), Positives = 82/251 (32%), Gaps = 44/251 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTGA   IG   VK L  +      A V   + ++            +     D+ D
Sbjct: 7   RALVTGAGKGIGRDTVKALHAS-----GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD 61

Query: 71  SGAVSRAVEGCKGV---FHVASP----CTLEDPVDPEKELILPAVQGTLNVLEAA----- 118
             A  +A+ G   V    + A+       LE   +         ++    V +       
Sbjct: 62  WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMI 121

Query: 119 KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
            R     +V  SS+ A V  P              + Y  ++     ++K +A     E 
Sbjct: 122 NRGVPGSIVNVSSMVAHVTFPNL------------ITYSSTKGAMTMLTKAMAM----EL 165

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP-VKDVAKA 237
              H + V +++P   L   M   ++A     ++L +        H L     V+DV  +
Sbjct: 166 G-PHKIRVNSVNPTVVLTD-MGKKVSADPEFARKLKER-------HPLRKFAEVEDVVNS 216

Query: 238 QVLLFESPAAS 248
            +L   S  ++
Sbjct: 217 -ILFLLSDRSA 226

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 38.3 bits (88), Expect = 8e-04
 Identities = 34/251 (13%), Positives = 65/251 (25%), Gaps = 25/251 (9%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVL 69
              VTG+   IG  +   L       +       ++   + A L       +    AD+ 
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 70  DSGAVSRAVE------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
              AV   V+      G   +    +       ++        A+               
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
              +       I+      G V          Y  ++      +K  A     E A   G
Sbjct: 126 LPHMKKQGFGRIINIASAHGLVASANKSA---YVAAKHGVVGFTKVTA----LETA-GQG 177

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------DVAKA 237
           +   AI P     PL++  ++   A+ ++     +           P         +   
Sbjct: 178 ITANAICPGWVRTPLVEKQIS---ALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGT 234

Query: 238 QVLLFESPAAS 248
             +   S AA+
Sbjct: 235 -AVFLASDAAA 244

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 38/266 (14%), Positives = 70/266 (26%), Gaps = 63/266 (23%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
           E +   VTGA   IG  + K L  +    I  +    S  S +  +   G      +  D
Sbjct: 9   ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-YESSGYAGD 67

Query: 68  VLDSGAVSRAVE-----------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLE 116
           V     +S  +                         L    D  ++++   +     + +
Sbjct: 68  VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 127

Query: 117 AAKRFGVR----RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK---- 168
              +  +     R++  SSI  +  N G                       Y  SK    
Sbjct: 128 PISKRMINNRYGRIINISSIVGLTGNVGQAN--------------------YSSSKAGVI 167

Query: 169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA 228
              +  A E A    + V AI P                 +   +     +  + + +  
Sbjct: 168 GFTKSLAKELA-SRNITVNAIAP---------------GFISSDMTDKISEQIKKNIISN 211

Query: 229 VPVK------DVAKAQVLLFESPAAS 248
           +P        +VA        S  + 
Sbjct: 212 IPAGRMGTPEEVANL-ACFLSSDKSG 236

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 37/252 (14%), Positives = 72/252 (28%), Gaps = 26/252 (10%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +V +TG++  IG                T  N       ++       G     +    A
Sbjct: 6   SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNED--RLEETKQQILKAGVPAEKINAVVA 63

Query: 67  DVLDSGAVSRAVEGCKGVF-----HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           DV ++      +      F      V +            +  +   Q T  +   A   
Sbjct: 64  DVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA--- 120

Query: 122 GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLAEKAAWE 177
                V+  +          KG++ + +S        S   +Y  +K          A +
Sbjct: 121 -----VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAID 175

Query: 178 FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP-VKDVAK 236
              +HGV V ++ P       M   +        +L       +E   +G     +++A 
Sbjct: 176 LI-QHGVRVNSVSPGAVATGFMGA-MGLPETASDKLYSFIGSRKECIPVGHCGKPEEIAN 233

Query: 237 AQVLLFESPAAS 248
             V L +   +S
Sbjct: 234 IIVFLADRNLSS 245

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 40/261 (15%), Positives = 74/261 (28%), Gaps = 50/261 (19%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           T+ VTG N  IG    + +                       +        + ++ DV +
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 70

Query: 71  SGAVSRAVEGCKGVF----------HVASPCTLEDPVDPEKELILPAVQ--GTLNVLEAA 118
           +  V++ ++                 V+      + +  E    +  V   G  N   A 
Sbjct: 71  TDIVTKTIQQIDADLGPISGLIANAGVSVVKPATE-LTHEDFAFVYDVNVFGVFNTCRAV 129

Query: 119 KR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
            +          +VVTSS+S+ + N         +       Y  S+     + K L   
Sbjct: 130 AKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVF-----YNSSKAACSNLVKGL--- 181

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK- 232
            A E+A   G+ V A+ P                 V              H    +P+  
Sbjct: 182 -AAEWA-SAGIRVNALSP---------------GYVNTDQTAHMDKKIRDHQASNIPLNR 224

Query: 233 -----DVAKAQVLLFESPAAS 248
                ++     +L  S  A+
Sbjct: 225 FAQPEEMTGQ-AILLLSDHAT 244

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 49/261 (18%), Positives = 81/261 (31%), Gaps = 48/261 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
            V +TG    +G      L       S+      G ++S    L  A DA +    ADV 
Sbjct: 6   VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 65

Query: 70  DSGAVSRAVEGCK-------GVFHVASPCTLEDPVDPEKELILPAVQ---------GTLN 113
           D   V   V           G F+ A     ++P +         V          G   
Sbjct: 66  DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEK 125

Query: 114 VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
           VL+  +  G   VV T+S+  I              +   +               L   
Sbjct: 126 VLKIMREQGSGMVVNTASVGGIRGIGNQ---SGYAAAKHGVVG-------------LTRN 169

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK- 232
           +A E+  ++G+ + AI P     P+++         ++QL   +       ++   P K 
Sbjct: 170 SAVEYG-RYGIRINAIAPGAIWTPMVE-------NSMKQLDPENPRKAAEEFIQVNPSKR 221

Query: 233 -----DVAKAQVLLFESPAAS 248
                ++A   V    S  AS
Sbjct: 222 YGEAPEIAAV-VAFLLSDDAS 241

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	331
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	100.0
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	100.0
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.97
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.96
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.94
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.91
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.88
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.88
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.88
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.87
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.87
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.87
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.87
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.87
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.87
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.87
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.87
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.87
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.86
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.86
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.86
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.86
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.86
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.86
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.85
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.85
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.85
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.85
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.85
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.85
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.84
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.84
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.84
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.84
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.83
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.83
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.83
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.82
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.82
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.82
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.82
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.82
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.81
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.81
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.81
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.81
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.8
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.8
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.8
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.79
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.79
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.79
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.78
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.77
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.77
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.76
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.75
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.75
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.74
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.73
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.73
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.72
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.72
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.67
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.67
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.65
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.62
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.59
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.57
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.55
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.48
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.47
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.3
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.67
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.55
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.34
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.29
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.27
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.25
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.21
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.19
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.15
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.15
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.97
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.94
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.93
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.83
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.8
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.79
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.78
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.76
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.76
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.7
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.7
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.69
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.67
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.66
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.65
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.63
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.62
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.57
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.57
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.55
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.52
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.52
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.49
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.49
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.48
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.48
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.47
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.46
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.45
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.44
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.43
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.42
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.39
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.37
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.37
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.34
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.34
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.28
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.22
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.16
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.15
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.14
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.14
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.09
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	97.0
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.97
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.92
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.85
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.83
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.79
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.77
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.75
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.73
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.72
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.68
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.66
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.64
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.63
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.62
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.62
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.62
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.58
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.55
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.46
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.43
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.4
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.4
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.36
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.34
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.34
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.31
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.27
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.26
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.25
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.24
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.22
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.2
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.07
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.07
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.05
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.05
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.03
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.03
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.97
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.92
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.92
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.91
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.87
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.82
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.81
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.78
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.77
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.74
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.69
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.65
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.63
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.62
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.61
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.6
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.6
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.59
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.58
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.46
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.44
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.42
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	95.41
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.36
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.35
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.35
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.21
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.21
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.21
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.18
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.18
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.18
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.17
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.12
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.09
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.06
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.03
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.0
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.91
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.89
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.87
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.81
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.75
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.66
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.65
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.58
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.5
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.46
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.44
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	94.17
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	94.14
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.12
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.09
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.72
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.68
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	93.44
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.39
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.37
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.25
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.11
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.05
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	92.88
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	92.86
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.8
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.8
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.8
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	92.48
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.31
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.22
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	92.07
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.98
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.82
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.81
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.72
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.52
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	91.28
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.19
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	91.02
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	90.99
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	90.97
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	90.94
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.64
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	90.47
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.94
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	89.91
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.85
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	89.62
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	89.47
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.44
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	88.88
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	88.88
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.24
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	87.82
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	87.73
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.45
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	86.72
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.35
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.07
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	85.53
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	84.67
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	84.56
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	84.34
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	84.17
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	84.14
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	84.09
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	84.05
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	83.73
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	83.32
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	82.47
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	82.45
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	82.38
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	81.45
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	81.34
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	81.25
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	81.18
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	80.74
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	80.6
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	80.52
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.51

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.5e-48  Score=339.07  Aligned_cols=299  Identities=16%  Similarity=0.132  Sum_probs=227.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhh---cCCCCCCCcEEEEEccCCCchHHHHHhcC--cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLF---ALPGAGDANLRVFEADVLDSGAVSRAVEG--CK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d   82 (331)
                      |+|||||||||||++|+++|+++|+ +|++++|..+..  ..+.   ........+++++++|++|.+++.+++++  +|
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence            6899999999999999999999999 999999854321  1111   11111222799999999999999999985  59


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC---EEEEeCccceeccCCCCCCccccCCCCCChhhhhc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (331)
                      +|||+|+..+......++..++++|+.++.+|+++|++.+++   +|||+||+ .+|+.+..  .|++|+++..|.    
T Consensus        81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~-~vYG~~~~--~~~~E~~~~~P~----  153 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS-ELYGLVQE--IPQKETTPFYPR----  153 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG-GGGTTCCS--SSBCTTSCCCCC----
T ss_pred             EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEch-hhhCCCCC--CCcCCCCCCCCC----
Confidence            999999988876677788899999999999999999987654   79999997 66765543  689999987765    


Q ss_pred             cCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCCc--c--CcCCCCceeHHH
Q 020110          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVPVKD  233 (331)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~v~v~D  233 (331)
                        ++|+.+|..+|++++.++++++++++++||+++|||+.....  ..+...+.+...+....  .  +++.++|+|++|
T Consensus       154 --~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D  231 (357)
T d1db3a_         154 --SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD  231 (357)
T ss_dssp             --SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHH
T ss_pred             --ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeech
Confidence              489999999999999999999999999999999999764432  23345555666665543  3  458899999999


Q ss_pred             HHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCC--------------------CCCCCCC----------
Q 020110          234 VAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPEFP--------------------VHRFDGE----------  282 (331)
Q Consensus       234 ~a~a~~~~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~--------------------~~~~~~~----------  282 (331)
                      +|+++..+++.. ..+.|++ +++.+|++|+++.+.+.++...                    .+.....          
T Consensus       232 ~~~a~~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (357)
T d1db3a_         232 YVKMQWMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRY  310 (357)
T ss_dssp             HHHHHHHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGG
T ss_pred             HHHHHHHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeecccc
Confidence            999999999865 4457755 5678999999999999884110                    0000000          


Q ss_pred             -CCCCccccccchHHH-HhhCCCc-cCHHHHHHHHHHHHH
Q 020110          283 -TQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVESLK  319 (331)
Q Consensus       283 -~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~~  319 (331)
                       .+.......+|++|+ ++|||+| .+|+|+|+++++++.
T Consensus       311 ~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l  350 (357)
T d1db3a_         311 FRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDL  350 (357)
T ss_dssp             CCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             CCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence             001123345799999 7899999 599999999987543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=6.8e-49  Score=341.93  Aligned_cols=300  Identities=20%  Similarity=0.220  Sum_probs=240.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEE------EEEecC--CCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSI------NATVFP--GSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V------~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      |||||||||||||++|+++|+++|+ +|      +.+++.  ......+.... ... +++++.+|+.+..........+
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~-~v~~~~~i~~~d~~~~~~~~~~~~~~~-~~~-~~~~~~~d~~~~~~~~~~~~~~   77 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAY-PDVPADEVIVLDSLTYAGNRANLAPVD-ADP-RLRFVHGDIRDAGLLARELRGV   77 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSC-TTSCCSEEEEEECCCTTCCGGGGGGGT-TCT-TEEEEECCTTCHHHHHHHTTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-CccCCceEEEEeCCCccccHhHhhhhh-cCC-CeEEEEeccccchhhhcccccc
Confidence            4899999999999999999999997 44      434322  11222222221 122 7999999999999998888999


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccC
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (331)
                      |.|+|+|+.........++...+++|+.++.+++++|++.++++|||+||+ .+|+....  .+++|+++..|..     
T Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~-~~yg~~~~--~~~~E~~~~~p~~-----  149 (322)
T d1r6da_          78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTN-QVYGSIDS--GSWTESSPLEPNS-----  149 (322)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEG-GGGCCCSS--SCBCTTSCCCCCS-----
T ss_pred             ceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecc-eeecCCCC--CCCCCCCCCCCCC-----
Confidence            999999987655444455678899999999999999999999999999997 55555443  6799999887764     


Q ss_pred             cchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHHH
Q 020110          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQ  238 (331)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a~  238 (331)
                       +|+.+|..+|.+++.++++++++++++||+++|||+.... ..+..++.++..|+++. +  |++.++|+|++|+|+++
T Consensus       150 -~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai  227 (322)
T d1r6da_         150 -PYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI  227 (322)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHH
Confidence             8999999999999999999999999999999999987543 46778888999998876 3  45889999999999999


Q ss_pred             HHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCC--CCCCCCCCCccccccchHHH-HhhCCCc-cCHHHHHHH
Q 020110          239 VLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPEFPVH--RFDGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRE  313 (331)
Q Consensus       239 ~~~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~  313 (331)
                      ..++++...+++||+ ++.+.++.|+++.+.+.++ .+.+  ..............+|++|+ +.|||+| ++++|+|++
T Consensus       228 ~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~  306 (322)
T d1r6da_         228 ALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLG-ADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLAR  306 (322)
T ss_dssp             HHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHT-CCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred             HHHHhCCCCCCeeEEeecccchhHHHHHHHHHHhC-CCccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHH
Confidence            999998877778866 5667999999999999984 3322  12222233444567899999 7899999 599999999


Q ss_pred             HHHHHHHcCC
Q 020110          314 TVESLKAKGF  323 (331)
Q Consensus       314 ~~~~~~~~~~  323 (331)
                      +++||+++..
T Consensus       307 ~i~w~~~n~~  316 (322)
T d1r6da_         307 TVRWYRENRG  316 (322)
T ss_dssp             HHHHHHHCHH
T ss_pred             HHHHHHHhHH
Confidence            9999998653

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-49  Score=339.12  Aligned_cols=298  Identities=21%  Similarity=0.275  Sum_probs=226.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |||||||||||||++|+++|+++|+ +|++++|.... ...+..... .. ++.....|+.+     .++.++|+|||+|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~-~~-~~d~~~~~~~~-----~~~~~~d~VihlA   73 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIG-HE-NFELINHDVVE-----PLYIEVDQIYHLA   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGTGGGTT-CT-TEEEEECCTTS-----CCCCCCSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCCcCCHHHHHHhcC-CC-ceEEEehHHHH-----HHHcCCCEEEECc
Confidence            6999999999999999999999999 99999874322 222222211 11 56666666644     4456899999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (331)
                      +......+..++...+++|+.++.+|+++|++.++ ++||+||. ++|+.+..  .|++|+..... .+..|.+.|+.+|
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~-~vy~~~~~--~~~~e~~~~~~-~~~~p~~~Y~~sK  148 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTS-EVYGDPEV--HPQSEDYWGHV-NPIGPRACYDEGK  148 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEG-GGGBSCSS--SSBCTTCCCBC-CSSSTTHHHHHHH
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEECh-heecCCCC--CCCCccccCCC-CCCCCccHHHHHH
Confidence            97665444566888999999999999999999886 79999997 55655443  45565432111 1112334899999


Q ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC-CChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHHHHHhhcC
Q 020110          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQVLLFES  244 (331)
Q Consensus       169 ~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a~~~~l~~  244 (331)
                      .++|.+++.++++++++++++||+++|||+.... ...+..++.++..|+++. +  |.+.++|+|++|+|++++.+++.
T Consensus       149 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~  228 (312)
T d2b69a1         149 RVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS  228 (312)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999987543 245678889999998876 3  44789999999999999988875


Q ss_pred             CCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHH-HhhCCCc-cCHHHHHHHHHHHHHHc
Q 020110          245 PAASGRYLC-TNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVESLKAK  321 (331)
Q Consensus       245 ~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~~~~  321 (331)
                      . ..+.|++ ++...++.++++.+++.++......+.............|++|+ +.|||+| ++++++|+++++||+++
T Consensus       229 ~-~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~  307 (312)
T d2b69a1         229 N-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE  307 (312)
T ss_dssp             S-CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             c-cCCceEecCCcccchhhHHHHHHHHhCCCCceEECCCCCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Confidence            5 4567765 56779999999999999843221122222223445677899999 7899999 69999999999999865

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.6e-47  Score=337.88  Aligned_cols=300  Identities=19%  Similarity=0.204  Sum_probs=229.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc--cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   85 (331)
                      |||||||||||||++|+++|++.|+..|+++++....  ...+..+.. .. +++++++|++|+..+.++++  ++|+||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISE-SN-RYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTT-CT-TEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhh-cC-CcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            4899999999999999999999999334555442221  122222222 22 89999999999999998886  489999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCC---------CCEEEEeCccceeccCCCCCCccc----------
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG---------VRRVVVTSSISAIVPNPGWKGKVF----------  146 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~v~~SS~~~~~~~~~~~~~~~----------  146 (331)
                      ||||.........++..++++|+.++.+++++|++.+         +++|||+||. ++|+....  .+.          
T Consensus        79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~-~vyg~~~~--~~~~~~~~~~~~~  155 (361)
T d1kewa_          79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD-EVYGDLPH--PDEVENSVTLPLF  155 (361)
T ss_dssp             ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEG-GGGCCCCC--GGGSCTTSCCCCB
T ss_pred             ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccc-eeeCCCcc--CCccccccCCCCc
Confidence            9999765433345578899999999999999998764         4589999997 55554332  222          


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~  223 (331)
                      .|+++..|      .+.||.+|.++|.++..++++++++++++||+++|||+.... ..+..++.++..|+++.   .|+
T Consensus       156 ~e~~~~~p------~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~g~  228 (361)
T d1kewa_         156 TETTAYAP------SSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGD  228 (361)
T ss_dssp             CTTSCCCC------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSC
T ss_pred             ccCCCCCC------CCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCCCC
Confidence            23333333      358999999999999999999999999999999999986543 46778899999998875   345


Q ss_pred             CCCCceeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC-------CCCC-CCCCCCCCCccccccch
Q 020110          224 HWLGAVPVKDVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE-------FPVH-RFDGETQPGLIPCKDAA  294 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~  294 (331)
                      +.|+|+|++|+|+++..++++...++.||+ ++...++.|+++.+.+.++.       .... ......+........|+
T Consensus       229 ~~r~~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  308 (361)
T d1kewa_         229 QIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDA  308 (361)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCC
T ss_pred             eEEeCEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCH
Confidence            889999999999999999998877778866 45679999999999886521       1000 11112223445677899


Q ss_pred             HHH-HhhCCCc-cCHHHHHHHHHHHHHHc
Q 020110          295 KRL-MDLGLVF-TPVEDAVRETVESLKAK  321 (331)
Q Consensus       295 ~k~-~~lG~~~-~~~~~~l~~~~~~~~~~  321 (331)
                      +|+ +.|||+| .+++++|+++++||+.+
T Consensus       309 ~k~~~~lgw~P~~~l~e~i~~ti~w~~~n  337 (361)
T d1kewa_         309 GKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             HHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence            999 7899999 69999999999999876

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=4.1e-46  Score=327.46  Aligned_cols=305  Identities=15%  Similarity=0.193  Sum_probs=233.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc-hhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      +||+|||||||||||++|+++|+++|+ +|.++.++..... ...........+++++.+|++|.+.+..++.+.+.|+|
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~-~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~   79 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHP-DVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVH   79 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCT-TCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCC-CeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence            589999999999999999999999998 7666555432111 11111111112899999999999999999999999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC----------CCccccCCCCCChhh
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW----------KGKVFDETSWTDLEY  156 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~----------~~~~~~E~~~~~~~~  156 (331)
                      +|+......+..++...+++|+.++.+++++++..+. ++|++||+. +|+....          ....++|+++..|. 
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~-vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~-  156 (346)
T d1oc2a_          80 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDE-VYGDLPLREDLPGHGEGPGEKFTAETNYNPS-  156 (346)
T ss_dssp             CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGG-GGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC-
T ss_pred             hhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccce-EecccCccccccccccCcccccccCCCCCCC-
Confidence            9987665444455788999999999999999999884 789989874 4543210          12345555555444 


Q ss_pred             hhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-c--CcCCCCceeHHH
Q 020110          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKD  233 (331)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D  233 (331)
                           +.||.+|.++|.+++.++++++++++++||+++|||+.... ..+..++.....+.++. +  +++.++|+|++|
T Consensus       157 -----s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D  230 (346)
T d1oc2a_         157 -----SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTND  230 (346)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHH
T ss_pred             -----CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccchhh
Confidence                 48999999999999999989999999999999999976443 45667777777887765 3  558899999999


Q ss_pred             HHHHHHHhhcCCCCCceE-EEeccccCHHHHHHHHHHhCCCCCCCC-CCCCCCCCccccccchHHH-HhhCCCcc--CHH
Q 020110          234 VAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVHR-FDGETQPGLIPCKDAAKRL-MDLGLVFT--PVE  308 (331)
Q Consensus       234 ~a~a~~~~l~~~~~~g~~-~~~~~~~s~~e~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~k~-~~lG~~~~--~~~  308 (331)
                      +|++++.++..+..++.| +++++..++.++++.|.+.++...... ..............|++|+ +.|||+|+  +|+
T Consensus       231 ~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~  310 (346)
T d1oc2a_         231 HSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFS  310 (346)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHH
T ss_pred             HHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCCHH
Confidence            999999999888777777 556677999999999999985432221 1112222334456799999 88999993  799


Q ss_pred             HHHHHHHHHHHHcC
Q 020110          309 DAVRETVESLKAKG  322 (331)
Q Consensus       309 ~~l~~~~~~~~~~~  322 (331)
                      ++|+++++||+++.
T Consensus       311 e~i~~ti~w~~~n~  324 (346)
T d1oc2a_         311 EGLEETIQWYTDNQ  324 (346)
T ss_dssp             HHHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999863

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.9e-45  Score=325.37  Aligned_cols=301  Identities=14%  Similarity=0.100  Sum_probs=225.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      .|||||||||||||++|+++|+++|+ +|++++|...........      ..++..+|+.+.+.+.++++++|+|||+|
T Consensus        15 nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~d~Vih~a   87 (363)
T d2c5aa1          15 NLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMTEDMF------CDEFHLVDLRVMENCLKVTEGVDHVFNLA   87 (363)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSCGGGT------CSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccchhhhcc------cCcEEEeechhHHHHHHHhhcCCeEeecc
Confidence            35899999999999999999999999 999998765443222211      56788899999999999999999999999


Q ss_pred             cCCCCC-CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCC-CChhhhhccCcchhH
Q 020110           89 SPCTLE-DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW-TDLEYCKSRKKWYPV  166 (331)
Q Consensus        89 ~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~-~~~~~~~~~~~~y~~  166 (331)
                      +..... .....+......|+.++.++++++++.++++|||+||.. +|+....  .+.+|... .....+..|.+.|+.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~-~~~~~~~--~~~~~~~~~~~e~~~~~p~~~Yg~  164 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSAC-IYPEFKQ--LETTNVSLKESDAWPAEPQDAFGL  164 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGG-GSCGGGS--SSSSSCEECGGGGSSBCCSSHHHH
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhhCccccccccccc-ccccccc--ccccccccccccCCcCCCCCHHHH
Confidence            876542 224556788999999999999999999999999999974 4443322  23333221 111122234458999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC---Chh-HHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHHHH
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NAS-CAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQV  239 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~---~~~-~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a~~  239 (331)
                      +|+++|++++.+.+.+|++++++||+++||+......   ... ...........+.. +  |.+.++|+|++|++++++
T Consensus       165 sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~  244 (363)
T d2c5aa1         165 EKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVL  244 (363)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHH
Confidence            9999999999999999999999999999999764321   112 22222333333333 3  457899999999999999


Q ss_pred             HhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHH-HhhCCCc-cCHHHHHHHHHH
Q 020110          240 LLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRETVE  316 (331)
Q Consensus       240 ~~l~~~~~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~~~  316 (331)
                      .+++.. ..+.|++ ++...|+.|+++.+.+.++ ...+......+........|++|+ +.|||+| ++++++|+++++
T Consensus       245 ~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g-~~~~i~~~~~~~~~~~~~~d~ska~~~LGw~p~~sleegi~~ti~  322 (363)
T d2c5aa1         245 RLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEE-KKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYF  322 (363)
T ss_dssp             HHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTT-CCCCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHH
T ss_pred             HHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhC-CCCceEeCCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence            998765 4567755 6778999999999999984 333333222223445566899999 7799999 699999999999


Q ss_pred             HHHHc
Q 020110          317 SLKAK  321 (331)
Q Consensus       317 ~~~~~  321 (331)
                      ||+++
T Consensus       323 w~~~~  327 (363)
T d2c5aa1         323 WIKEQ  327 (363)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3e-45  Score=321.33  Aligned_cols=304  Identities=17%  Similarity=0.126  Sum_probs=239.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc-hh---hcCCC-CCCCcEEEEEccCCCchHHHHHhcCcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HL---FALPG-AGDANLRVFEADVLDSGAVSRAVEGCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~---~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~d   82 (331)
                      ++|+|||||||||||++|+++|++.|+ +|++++|...... ..   ..... ....+++++.+|+.|...........+
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            457999999999999999999999999 9999987433211 11   11100 001168999999999999988889999


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCc
Q 020110           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (331)
Q Consensus        83 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (331)
                      .|+|+++......+..++...+++|+.++.+|+++|++.++++|||+||+. +|+...  ..|++|+++..|..      
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~-vyg~~~--~~~~~E~~~~~p~~------  164 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSS-TYGDHP--GLPKVEDTIGKPLS------  164 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GGTTCC--CSSBCTTCCCCCCS------
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccce-eeCCCC--CCCccCCCCCCCCC------
Confidence            999999876544445567889999999999999999999999999999984 555443  36899999887764      


Q ss_pred             chhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC---ChhHHHHHHHHcCCCCc-cC--cCCCCceeHHHHHH
Q 020110          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDT-QE--YHWLGAVPVKDVAK  236 (331)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~-~~--~~~~~~v~v~D~a~  236 (331)
                      .|+.+|..+|++++.+++..+++++++||+++||++..+..   ..+..++.++..|+++. ++  .+.++|+|++|+|+
T Consensus       165 ~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~  244 (341)
T d1sb8a_         165 PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ  244 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccch
Confidence            89999999999999999999999999999999999865432   35567788999998876 44  48899999999999


Q ss_pred             HHHHhhcCCCC-Cc-eEEEe-ccccCHHHHHHHHHHhCCCCCCCC-----CCCCCCCCccccccchHHH-HhhCCCc-cC
Q 020110          237 AQVLLFESPAA-SG-RYLCT-NGIYQFGDFAERVSKLFPEFPVHR-----FDGETQPGLIPCKDAAKRL-MDLGLVF-TP  306 (331)
Q Consensus       237 a~~~~l~~~~~-~g-~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~k~-~~lG~~~-~~  306 (331)
                      ++..++..... .+ .|+++ +...|+.|+++.|.+.++...+..     ..............|++|+ +.|||+| .+
T Consensus       245 a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~s  324 (341)
T d1sb8a_         245 ANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYD  324 (341)
T ss_dssp             HHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCC
T ss_pred             hhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHHCCCcCCC
Confidence            99998876532 33 78665 467999999999999874222111     1111123344566799999 7799999 69


Q ss_pred             HHHHHHHHHHHHHHc
Q 020110          307 VEDAVRETVESLKAK  321 (331)
Q Consensus       307 ~~~~l~~~~~~~~~~  321 (331)
                      ++++|+++++||+..
T Consensus       325 l~~gi~~ti~wy~~~  339 (341)
T d1sb8a_         325 VSAGVALAMPWYIMF  339 (341)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999999863

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3.4e-45  Score=318.44  Aligned_cols=298  Identities=18%  Similarity=0.134  Sum_probs=230.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVF   85 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi   85 (331)
                      |+|||||||||||++|+++|+++|| +|++++|.....  ..+..+.. .+ +++++.+|++|.+.+.+.+..  .++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~-~~-~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   77 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI-EG-DIQYEDGDMADACSVQRAVIKAQPQEVY   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC-GG-GEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc-cC-CcEEEEccccChHHhhhhhccccccccc
Confidence            6899999999999999999999999 999999875432  22322221 12 799999999999999887764  68899


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcch
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (331)
                      |+|+.........++...++.|+.++.+++++|++.+.+ +|++.|| .++|+....  .+.+|+++..|..      +|
T Consensus        78 ~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss-~~~~~~~~~--~~~~E~~~~~p~~------~Y  148 (321)
T d1rpna_          78 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST-SEMFGLIQA--ERQDENTPFYPRS------PY  148 (321)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE-GGGGCSCSS--SSBCTTSCCCCCS------HH
T ss_pred             cccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccc-hhhcCcccC--CCCCCCCCccccC------hh
Confidence            998876655555667888999999999999999998866 5666555 477765553  6778988877664      89


Q ss_pred             hHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCCc--c--CcCCCCceeHHHHHHHH
Q 020110          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVPVKDVAKAQ  238 (331)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~v~v~D~a~a~  238 (331)
                      +.+|+++|.++..++++++++++++||+++|||......  ..+...+.+...+....  +  |++.++|+|++|+|+++
T Consensus       149 ~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~  228 (321)
T d1rpna_         149 GVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAM  228 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHH
Confidence            999999999999999999999999999999999754332  22345556666554332  3  45889999999999999


Q ss_pred             HHhhcCCCCCceE-EEeccccCHHHHHHHHHHhCCCCCCCCCC-----CCCCCCccccccchHHH-HhhCCCc-cCHHHH
Q 020110          239 VLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVHRFD-----GETQPGLIPCKDAAKRL-MDLGLVF-TPVEDA  310 (331)
Q Consensus       239 ~~~l~~~~~~g~~-~~~~~~~s~~e~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~  310 (331)
                      .+++.++.. +.| ++++...|+.++++.+.+.++ ...+...     ...+........|++|+ +.|||+| .+++|+
T Consensus       229 ~~~~~~~~~-~~~ni~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~  306 (321)
T d1rpna_         229 WLMLQQDKA-DDYVVATGVTTTVRDMCQIAFEHVG-LDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDEL  306 (321)
T ss_dssp             HHHHHSSSC-CCEEECCSCEEEHHHHHHHHHHTTT-CCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHH
T ss_pred             HHHHhcCCc-CCceecccccceehhhhHHHHHHhC-CCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCHHHH
Confidence            999988754 445 556778999999999999984 2221111     01112334567799999 7799999 699999


Q ss_pred             HHHHHHHHHHc
Q 020110          311 VRETVESLKAK  321 (331)
Q Consensus       311 l~~~~~~~~~~  321 (331)
                      |++|++|++++
T Consensus       307 i~~tv~~~l~~  317 (321)
T d1rpna_         307 IRMMVEADLRR  317 (321)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998753

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.4e-45  Score=321.50  Aligned_cols=302  Identities=17%  Similarity=0.130  Sum_probs=220.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc-hhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      |||||||||||||++|++.|+++|+ +|++++|-..... ...........+++++++|++|.+.+.++++  ++|+|||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            4799999999999999999999999 9999987332221 1111000001179999999999999999987  6899999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCC-CCChhhhhccCcchh
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETS-WTDLEYCKSRKKWYP  165 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~-~~~~~~~~~~~~~y~  165 (331)
                      +||......+..++...+++|+.++.+++++|++.++++||++||. ++|+....  .+..|.+ ...|.      .+|+
T Consensus        80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~-~vy~~~~~--~~~~e~~~~~~p~------~~Y~  150 (338)
T d1udca_          80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSA-TVYGDQPK--IPYVESFPTGTPQ------SPYG  150 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEG-GGGCSCCS--SSBCTTSCCCCCS------SHHH
T ss_pred             CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcc-eEEccccc--cccccccccCCCc------chHH
Confidence            9997654333445778999999999999999999999999999997 45544332  3444443 33333      4899


Q ss_pred             HHHHHHHHHHHHHHHH-cCCeEEEEcCCcccCCCCCCCC---------ChhHHHHHHHHcCC-CCc---------cCcCC
Q 020110          166 VSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPYL---------NASCAVLQQLLQGS-KDT---------QEYHW  225 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~---------~~~~~~~~~~~~~~-~~~---------~~~~~  225 (331)
                      .+|..+|+++..+.++ .+++++++|++++|||......         ..+..++.....+. ++.         .+.+.
T Consensus       151 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~  230 (338)
T d1udca_         151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV  230 (338)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCE
T ss_pred             HHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCce
Confidence            9999999999876655 5899999999999999653211         12334444443332 222         14467


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--C-CceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCC-CCCCCCccccccchHHH-Hh
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--A-SGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFD-GETQPGLIPCKDAAKRL-MD  299 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~-~g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~-~~  299 (331)
                      +||+|++|++.++..+.....  . ..+||++ +.++|+.|+++.+.+.++ .+++... ...........+|++|+ +.
T Consensus       231 rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~  309 (338)
T d1udca_         231 RDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACG-KPVNYHFAPRREGDLPAYWADASKADRE  309 (338)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHT-SCCCEEEECCCTTCCSBCCBCCHHHHHH
T ss_pred             eeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHC-CCCceEECCCCCCCCCEeeECHHHHHHH
Confidence            999999999988877665322  2 2368775 466999999999999984 3333221 22222344567899999 67


Q ss_pred             hCCCc-cCHHHHHHHHHHHHHHcC
Q 020110          300 LGLVF-TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       300 lG~~~-~~~~~~l~~~~~~~~~~~  322 (331)
                      |||+| .+++++|+++++|++++.
T Consensus       310 lgwkp~~~l~egi~~ti~w~~~~~  333 (338)
T d1udca_         310 LNWRVTRTLDEMAQDTWHWQSRHP  333 (338)
T ss_dssp             HCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             HCCCcCCCHHHHHHHHHHHHHhch
Confidence            99999 699999999999999984

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.9e-44  Score=312.10  Aligned_cols=307  Identities=18%  Similarity=0.223  Sum_probs=227.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHH-HhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSR-AVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~vih~a   88 (331)
                      |||||||||||||++|+++|+++|+.+|+++++.......+...    . +++++++|+++.+++.+ +.+++|+|||+|
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~----~-~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a   75 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH----P-HFHFVEGDISIHSEWIEYHVKKCDVVLPLV   75 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTC----T-TEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccC----C-CeEEEECccCChHHHHHHHHhCCCcccccc
Confidence            48999999999999999999999954899998765443333322    1 89999999998866554 667899999999


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhh-hhccCcchhHH
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY-CKSRKKWYPVS  167 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~-~~~~~~~y~~s  167 (331)
                      +.........++...+++|+.++.+++++|.+.++ ++++.||+.+ |+....  ....|.....+.. ...|...|+.+
T Consensus        76 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~-~~~~~~--~~~~~~~~~~~~~~~~~p~~~Y~~s  151 (342)
T d2blla1          76 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEV-YGMCSD--KYFDEDHSNLIVGPVNKPRWIYSVS  151 (342)
T ss_dssp             CCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGG-GBTCCC--SSBCTTTCCCBCCCTTCGGGHHHHH
T ss_pred             ccccccccccCCccccccccccccccccccccccc-cccccccccc-cccccc--cccccccccccccccCCCcchhhhc
Confidence            98665444455678899999999999999999986 5667788644 444332  2333332221111 11233479999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC-------CChhHHHHHHHHcCCCCc-c--CcCCCCceeHHHHHHH
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-------LNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKA  237 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~a~a  237 (331)
                      |..+|+++..+++.++++++++|++.+||+.....       ......++.+++.|+++. .  |++.++|+|++|+|++
T Consensus       152 K~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a  231 (342)
T d2blla1         152 KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA  231 (342)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHH
T ss_pred             ccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccce
Confidence            99999999999999999999999999999964331       123567788888998876 3  4588999999999999


Q ss_pred             HHHhhcCCC--CCc-eEEEe-ccc-cCHHHHHHHHHHhCCCCCCCC----CCCC-----------CCCCccccccchHHH
Q 020110          238 QVLLFESPA--ASG-RYLCT-NGI-YQFGDFAERVSKLFPEFPVHR----FDGE-----------TQPGLIPCKDAAKRL  297 (331)
Q Consensus       238 ~~~~l~~~~--~~g-~~~~~-~~~-~s~~e~~~~i~~~~~~~~~~~----~~~~-----------~~~~~~~~~~~~~k~  297 (331)
                      +..+++++.  ..| +||++ ++. +|+.|+++.|.+.++......    ....           ..........|++|+
T Consensus       232 ~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  311 (342)
T d2blla1         232 LYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNA  311 (342)
T ss_dssp             HHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHH
T ss_pred             eeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHH
Confidence            999998743  334 78774 544 799999999999874221111    1000           001223456799999


Q ss_pred             -HhhCCCc-cCHHHHHHHHHHHHHHcCCCC
Q 020110          298 -MDLGLVF-TPVEDAVRETVESLKAKGFLG  325 (331)
Q Consensus       298 -~~lG~~~-~~~~~~l~~~~~~~~~~~~~~  325 (331)
                       +.|||+| .+++|+|+++++||+++..++
T Consensus       312 ~~~lgw~P~~sleegl~~ti~~y~~~~~~~  341 (342)
T d2blla1         312 HRCLDWEPKIDMQETIDETLDFFLRTVDLT  341 (342)
T ss_dssp             HHHHCCCCCCCHHHHHHHHHHHHHHHSCTT
T ss_pred             HHHHCCCcCCCHHHHHHHHHHHHHhCcCCC
Confidence             7899999 599999999999999887664

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-43  Score=307.49  Aligned_cols=298  Identities=16%  Similarity=0.107  Sum_probs=221.6

Q ss_pred             CeE-EEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc--chhhcCCC----CCCCcEEEEEccCCCchHHHHHhc--C
Q 020110           10 ETV-CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPG----AGDANLRVFEADVLDSGAVSRAVE--G   80 (331)
Q Consensus        10 ~~v-lVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~--~   80 (331)
                      ||| ||||||||||++|+++|+++|| +|++++|..+..  ..+..+..    ....+++++.+|++|++.+..++.  +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   79 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK   79 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcc
Confidence            578 9999999999999999999999 999999965421  11111111    111278999999999999999885  4


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCC---CEEEEeCccceeccCCCCCCccccCCCCCChhhh
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (331)
                      +++|+|+++.........++...+++|+.++.++++++++.++   ++|||+||. ++|+.+..  .+++|+++..|.  
T Consensus        80 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~-~vyg~~~~--~~~~E~~~~~P~--  154 (347)
T d1t2aa_          80 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTS-ELYGKVQE--IPQKETTPFYPR--  154 (347)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG-GGTCSCSS--SSBCTTSCCCCC--
T ss_pred             cceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecch-heecCCCC--CCCCCCCCCCCC--
Confidence            7899999987654333445677789999999999999998865   489999987 66765543  689999987765  


Q ss_pred             hccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCC--hh-HHHHHHHHcCCCCc-c--CcCCCCceeH
Q 020110          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLN--AS-CAVLQQLLQGSKDT-Q--EYHWLGAVPV  231 (331)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~--~~-~~~~~~~~~~~~~~-~--~~~~~~~v~v  231 (331)
                          ++||.+|..+|++++.++++++++++++||+++|||.......  .. ..++.....+.+.. .  +++.++|+|+
T Consensus       155 ----~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v  230 (347)
T d1t2aa_         155 ----SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA  230 (347)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEH
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEe
Confidence                4899999999999999998999999999999999997544321  11 22233333444443 3  4578999999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCC---------CC-------------CCCCccc
Q 020110          232 KDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFD---------GE-------------TQPGLIP  289 (331)
Q Consensus       232 ~D~a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~---------~~-------------~~~~~~~  289 (331)
                      +|+|+++..++.+......++..+...++.+....+...++. .+....         ..             .+.....
T Consensus       231 ~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~  309 (347)
T d1t2aa_         231 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGK-TIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDF  309 (347)
T ss_dssp             HHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTC-CEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCB
T ss_pred             cHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhhcc-eeeecccchhhhhhhhhcCCceeeecccCCCCCCcCE
Confidence            999999999998875443445566778999999998887732 111000         00             0112234


Q ss_pred             cccchHHH-HhhCCCc-cCHHHHHHHHHHHH
Q 020110          290 CKDAAKRL-MDLGLVF-TPVEDAVRETVESL  318 (331)
Q Consensus       290 ~~~~~~k~-~~lG~~~-~~~~~~l~~~~~~~  318 (331)
                      ..+|++|+ +.|||+| .+|+|+|+++++|.
T Consensus       310 ~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~  340 (347)
T d1t2aa_         310 LQGDCTKAKQKLNWKPRVAFDELVREMVHAD  340 (347)
T ss_dssp             CCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred             eeECHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence            56799999 7799999 59999999998754

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.5e-43  Score=308.79  Aligned_cols=305  Identities=14%  Similarity=0.101  Sum_probs=220.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      |.|||||||||||++|+++|+++|+ +|+++++.... .............+++++++|++|.+.+.+++.  ++|+|||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            4699999999999999999999999 99998763322 111111110011178899999999999998886  6899999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC-CCccccCCCCCChhhhhccCcchh
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~-~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      +||..........+..+..+|+.++.+++++|++.++++|||+||..+++..... ...+++|+++..|.      ++|+
T Consensus        81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~------~~Y~  154 (347)
T d1z45a2          81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT------NPYG  154 (347)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC------SHHH
T ss_pred             ccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCC------ChhH
Confidence            9998764344455678899999999999999999999999999998554433322 23567887776665      4899


Q ss_pred             HHHHHHHHHHHHHHHH--cCCeEEEEcCCcccCCCCCCC--------C-ChhHHHHHHHHc-CCCCc-cCc--------C
Q 020110          166 VSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQPY--------L-NASCAVLQQLLQ-GSKDT-QEY--------H  224 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~--------~-~~~~~~~~~~~~-~~~~~-~~~--------~  224 (331)
                      .+|.++|++++.+.+.  .+++++++||+++||+.....        . ..+..++..... +.++. +|+        .
T Consensus       155 ~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~  234 (347)
T d1z45a2         155 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP  234 (347)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSC
T ss_pred             hHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCce
Confidence            9999999999998754  579999999999999854221        1 122233333322 23332 332        4


Q ss_pred             CCCceeHHHHHHHHHHhhcCC------C-CCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCC-CCCCccccccchH
Q 020110          225 WLGAVPVKDVAKAQVLLFESP------A-ASGRYLC-TNGIYQFGDFAERVSKLFPEFPVHRFDGE-TQPGLIPCKDAAK  295 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~------~-~~g~~~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  295 (331)
                      .+|++++.|++.++..++...      . ..+.||+ ++.++|+.|+++.+.+.++ .+++..... ..........|++
T Consensus       235 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~d~s  313 (347)
T d1z45a2         235 IRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASG-IDLPYKVTGRRAGDVLNLTAKPD  313 (347)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHT-CCCCC---------CCCCCBCCH
T ss_pred             eeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHC-CCCceEeCCCCCCCCCEeeECHH
Confidence            678999999999988776531      1 1236766 5677999999999999984 443332222 2233455678999


Q ss_pred             HH-HhhCCCc-cCHHHHHHHHHHHHHHcC
Q 020110          296 RL-MDLGLVF-TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       296 k~-~~lG~~~-~~~~~~l~~~~~~~~~~~  322 (331)
                      |+ ++|||+| ++++|+|+++++|++++.
T Consensus       314 k~~~~lGw~p~~~lee~i~~ti~w~~~np  342 (347)
T d1z45a2         314 RAKRELKWQTELQVEDSCKDLWKWTTENP  342 (347)
T ss_dssp             HHHHHTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHHhCh
Confidence            99 7799999 699999999999999984

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7e-43  Score=305.99  Aligned_cols=301  Identities=15%  Similarity=0.076  Sum_probs=224.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc--cchhhcCCC----CCCCcEEEEEccCCCchHHHHHhc--Cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPG----AGDANLRVFEADVLDSGAVSRAVE--GC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~--~~   81 (331)
                      |++||||||||||+||+++|+++|| +|++++|..+.  ...+..+..    .....++++.+|+++.+.+.+.++  ++
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            6899999999999999999999999 99999985432  111111110    111268899999999999988875  57


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-----CCCEEEEeCccceeccCCCCCCccccCCCCCChhh
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (331)
                      |+|||+|+........+++...++.|+.++.+++++++..     ...++++.||. .+++...   .+++|+++..|. 
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~-~~~~~~~---~~~~E~~~~~p~-  155 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS-EMFGSTP---PPQSETTPFHPR-  155 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG-GGGTTSC---SSBCTTSCCCCC-
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccc-eecccCC---CCCCCCCCCCCc-
Confidence            9999999986643334567788999999999999998754     23467776664 4444332   568899887766 


Q ss_pred             hhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCC-Cc-c--CcCCCCcee
Q 020110          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSK-DT-Q--EYHWLGAVP  230 (331)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~-~~-~--~~~~~~~v~  230 (331)
                           +.|+.+|..+|.++..+.+.++++++++||++||||......  ..+...+.+...+.. .. .  +.+.+|++|
T Consensus       156 -----~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~  230 (339)
T d1n7ha_         156 -----SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF  230 (339)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred             -----chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcccccee
Confidence                 489999999999999999999999999999999999765432  122233334444433 22 3  448899999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCC----CCCCCCCCccccccchHHH-HhhCCCc-
Q 020110          231 VKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHR----FDGETQPGLIPCKDAAKRL-MDLGLVF-  304 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~k~-~~lG~~~-  304 (331)
                      ++|+|+++..++.++...+.+++.+...++.++++.+.+.++......    .....+.....+..|++|+ +.|||+| 
T Consensus       231 v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw~P~  310 (339)
T d1n7ha_         231 AGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQ  310 (339)
T ss_dssp             HHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCC
T ss_pred             eehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCCCcC
Confidence            999999999999988766667777888999999999999984321110    0011112334556799999 7799999 


Q ss_pred             cCHHHHHHHHHHHHHHc
Q 020110          305 TPVEDAVRETVESLKAK  321 (331)
Q Consensus       305 ~~~~~~l~~~~~~~~~~  321 (331)
                      .+|+++|++|++|+++.
T Consensus       311 ~~le~gi~~ti~~~~~~  327 (339)
T d1n7ha_         311 VGFEKLVKMMVDEDLEL  327 (339)
T ss_dssp             SCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence            59999999999999653

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.2e-43  Score=315.29  Aligned_cols=312  Identities=17%  Similarity=0.157  Sum_probs=221.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEec---C----------C-Cc---cchhhcCCCCCCCcEEEEEccCCCc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF---P----------G-SD---SSHLFALPGAGDANLRVFEADVLDS   71 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r---~----------~-~~---~~~~~~~~~~~~~~~~~~~~Dl~~~   71 (331)
                      +|||||||||||||++|+++|+++|| +|++++.   .          . ..   ...+.......+.+++++.+|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCH
Confidence            36999999999999999999999999 9999851   0          0 00   0000000000111789999999999


Q ss_pred             hHHHHHhcC--ccEEEEcccCCCCCCCC---CchhhhhHHHHHHHHHHHHHHHhCCCCE-EEEeCccceeccCCCCC---
Q 020110           72 GAVSRAVEG--CKGVFHVASPCTLEDPV---DPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTSSISAIVPNPGWK---  142 (331)
Q Consensus        72 ~~~~~~~~~--~d~vih~a~~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~SS~~~~~~~~~~~---  142 (331)
                      +.+.+++++  +|+|||+||......+.   ..+..+++.|+.++.+++++|++.++++ +++.|| .++|+....+   
T Consensus        80 ~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss-~~~~~~~~~~~~~  158 (393)
T d1i24a_          80 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGT-MGEYGTPNIDIEE  158 (393)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECC-GGGGCCCSSCBCS
T ss_pred             HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccc-ccccccccccccc
Confidence            999999874  69999999976542222   2245678999999999999999987765 555555 4666544320   


Q ss_pred             -CccccCCCCCC-hhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC----------------CC
Q 020110          143 -GKVFDETSWTD-LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY----------------LN  204 (331)
Q Consensus       143 -~~~~~E~~~~~-~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~----------------~~  204 (331)
                       ..+..|+.... ...+..|.+.|+.+|+.+|.++..++++++++++++||+++|||.....                ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  238 (393)
T d1i24a_         159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT  238 (393)
T ss_dssp             SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred             ccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccccc
Confidence             01111211100 0111234458999999999999999999999999999999999975321                12


Q ss_pred             hhHHHHHHHHcCCCCc-cC--cCCCCceeHHHHHHHHHHhhcCCCCCceE---EEeccccCHHHHHHHHHHhCC--CCCC
Q 020110          205 ASCAVLQQLLQGSKDT-QE--YHWLGAVPVKDVAKAQVLLFESPAASGRY---LCTNGIYQFGDFAERVSKLFP--EFPV  276 (331)
Q Consensus       205 ~~~~~~~~~~~~~~~~-~~--~~~~~~v~v~D~a~a~~~~l~~~~~~g~~---~~~~~~~s~~e~~~~i~~~~~--~~~~  276 (331)
                      .+..++.+...|+++. +|  .+.+||+|++|+|+++..++++....|.+   +++++.+|+.|+++.+.+..+  +..+
T Consensus       239 ~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~  318 (393)
T d1i24a_         239 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDV  318 (393)
T ss_dssp             HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCC
T ss_pred             chhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCc
Confidence            3567788888888877 44  47899999999999999999988777743   345567899999999988652  2222


Q ss_pred             CCCCC---CCCCCccccccchHHHHhhCCCc-cCHHHHHHHHHHHHHHcC
Q 020110          277 HRFDG---ETQPGLIPCKDAAKRLMDLGLVF-TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       277 ~~~~~---~~~~~~~~~~~~~~k~~~lG~~~-~~~~~~l~~~~~~~~~~~  322 (331)
                      .....   ...........|++|+++|||+| .+++++++++++|+++++
T Consensus       319 ~~~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~k  368 (393)
T d1i24a_         319 KKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFK  368 (393)
T ss_dssp             CEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTG
T ss_pred             ceeeccCCCCCCCccEecCCHHHHHHcCCccccCHHHHHHHHHHHHHHHH
Confidence            21111   11123345567889997799999 599999999999998764

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-42  Score=300.20  Aligned_cols=289  Identities=16%  Similarity=0.128  Sum_probs=213.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   86 (331)
                      .|||||||||||||++|+++|+++|+ .|+++++..                    ..|+.+.+.+.++++  ++|.|+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~-~vi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~d~v~~   60 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTRD--------------------ELNLLDSRAVHDFFASERIDQVYL   60 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCTT--------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcC-EEEEecCch--------------------hccccCHHHHHHHHhhcCCCEEEE
Confidence            36999999999999999999999999 887664321                    268889998888875  4899999


Q ss_pred             cccCCCCC-CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           87 VASPCTLE-DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        87 ~a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      +|+..... ....++.+.++.|+.++.+++++|++.++++|||+||.+ +|+....  .+++|+.+..... ..+.++|+
T Consensus        61 ~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~-vyg~~~~--~~~~E~~~~~~~~-~~~~~~Y~  136 (315)
T d1e6ua_          61 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSC-IYPKLAK--QPMAESELLQGTL-EPTNEPYA  136 (315)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGG-GSCTTCC--SSBCGGGTTSSCC-CGGGHHHH
T ss_pred             cchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCce-EcCCCCC--CCccCCccccCCC-CCCCCHHH
Confidence            99765431 112335667899999999999999999999999999984 5554432  5677765443211 11224799


Q ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCC---hh-----HHHHHHHHcCCCCc-c--CcCCCCceeHHHH
Q 020110          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLN---AS-----CAVLQQLLQGSKDT-Q--EYHWLGAVPVKDV  234 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~---~~-----~~~~~~~~~~~~~~-~--~~~~~~~v~v~D~  234 (331)
                      .+|..+|++++.+.+++|++++++||++||||+......   ..     .........+..+. .  +.+.++++|++|+
T Consensus       137 ~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~  216 (315)
T d1e6ua_         137 IAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDM  216 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehh
Confidence            999999999999999999999999999999997643211   11     11223344444444 3  3477999999999


Q ss_pred             HHHHHHhhcCCC---------CCceEE-EeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCccccccchHHHHhhCCCc
Q 020110          235 AKAQVLLFESPA---------ASGRYL-CTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLIPCKDAAKRLMDLGLVF  304 (331)
Q Consensus       235 a~a~~~~l~~~~---------~~g~~~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~  304 (331)
                      ++++..++....         ..+.++ +.+...++.++++.+.+.++......+....+.......+|++|+++|||+|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~d~sk~k~Lg~~p  296 (315)
T d1e6ua_         217 AAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYH  296 (315)
T ss_dssp             HHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHHTTCCC
T ss_pred             HHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCCCceeccCHHHHHHcCCCC
Confidence            999998886542         122454 4567789999999999998432211122222223334568999998899999


Q ss_pred             -cCHHHHHHHHHHHHHHcC
Q 020110          305 -TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       305 -~~~~~~l~~~~~~~~~~~  322 (331)
                       .+++|+|+++++||+++.
T Consensus       297 ~~~l~e~i~~ti~w~~~N~  315 (315)
T d1e6ua_         297 EISLEAGLASTYQWFLENQ  315 (315)
T ss_dssp             CCCHHHHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHHHHcC
Confidence             599999999999999763

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-42  Score=303.85  Aligned_cols=303  Identities=18%  Similarity=0.164  Sum_probs=217.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-------chhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-------SHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   80 (331)
                      |||||||||||||++|+++|+++|+ +|++++|.....       ............+++++++|++|.+.+.+++.+  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            5899999999999999999999999 999987521111       111110000111789999999999999988754  


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhcc
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (331)
                      +++++|+||.........++...++.|+.++.++++++++.++++|||+||+.. |+.... .....+.....+.     
T Consensus        82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~-~~~~~~-~~~~~~~~~~~~~-----  154 (346)
T d1ek6a_          82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATV-YGNPQY-LPLDEAHPTGGCT-----  154 (346)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG-GCSCSS-SSBCTTSCCCCCS-----
T ss_pred             cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCccccccccccee-eecccc-ccccccccccccC-----
Confidence            678999999876544445578889999999999999999999999999998744 443332 1222222222222     


Q ss_pred             CcchhHHHHHHHHHHHHHHHH-cCCeEEEEcCCcccCCCCCCC--------C-ChhHHHHHHHHc-CCCCc---------
Q 020110          161 KKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPY--------L-NASCAVLQQLLQ-GSKDT---------  220 (331)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~--------~-~~~~~~~~~~~~-~~~~~---------  220 (331)
                       ++|+.+|..+|+.+..+++. .+++.+++||+++||+.....        . ..+..++..... +.++.         
T Consensus       155 -~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~  233 (346)
T d1ek6a_         155 -NPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE  233 (346)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred             -ChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCC
Confidence             48999999999999988765 589999999999999864321        1 123333333332 22221         


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCCC--CC-ceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCC-CCCCCCccccccchH
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESPA--AS-GRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFD-GETQPGLIPCKDAAK  295 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~~--~~-g~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  295 (331)
                      .+.+.|||+|++|+|.++..++....  .. .+||++ +...++.|+++.|.+.++ .+.+... ...+........|++
T Consensus       234 ~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~-~~~~~~~~~~~~~e~~~~~~d~~  312 (346)
T d1ek6a_         234 DGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG-KKIPYKVVARREGDVAACYANPS  312 (346)
T ss_dssp             SSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHC-SCCCEEEECCCTTCCSEECBCCH
T ss_pred             CCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhC-CCCCeEECCCCCCCCCEeeECHH
Confidence            24467899999999999987754432  22 368664 567999999999999984 3333222 222233455678999


Q ss_pred             HH-HhhCCCc-cCHHHHHHHHHHHHHHcC
Q 020110          296 RL-MDLGLVF-TPVEDAVRETVESLKAKG  322 (331)
Q Consensus       296 k~-~~lG~~~-~~~~~~l~~~~~~~~~~~  322 (331)
                      |+ +.|||+| .+++|+|+++++|++++.
T Consensus       313 k~~~~lgw~p~~slee~I~~~i~w~~~n~  341 (346)
T d1ek6a_         313 LAQEELGWTAALGLDRMCEDLWRWQKQNP  341 (346)
T ss_dssp             HHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHCCCcCCCHHHHHHHHHHHHHhCH
Confidence            99 7799999 599999999999999875

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=1.3e-41  Score=297.97  Aligned_cols=300  Identities=25%  Similarity=0.323  Sum_probs=226.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--CCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      +|+|||||||||||++|+++|+++|+ +|+++.|+..+...+.+...  ........+.+|++|.+++.+++.++|+|+|
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~   89 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH   89 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence            57999999999999999999999999 99999997655444332110  0110455677999999999999999999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCEEEEeCccceeccCCCC-CCccccCC---------------
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGW-KGKVFDET---------------  149 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~-~~~~~~E~---------------  149 (331)
                      +++....   ..++...++.|+.++.+++++|.+. ++++|||+||..+++..... .....+|+               
T Consensus        90 ~a~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e  166 (342)
T d1y1pa1          90 IASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPE  166 (342)
T ss_dssp             CCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCT
T ss_pred             hcccccc---cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccc
Confidence            9997653   3446778899999999999999887 69999999997655443322 22223333               


Q ss_pred             -CCCChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCC--CCChhHHHHHHHHcCCCCc--cC
Q 020110          150 -SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQP--YLNASCAVLQQLLQGSKDT--QE  222 (331)
Q Consensus       150 -~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~--~~  222 (331)
                       ++..|.      .+|+.+|..+|.+++.|++++  +++++++||+.+|||...+  .......++.++..|....  .+
T Consensus       167 ~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~  240 (342)
T d1y1pa1         167 SDPQKSL------WVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALAL  240 (342)
T ss_dssp             TSTTHHH------HHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHT
T ss_pred             cCCCCCc------CcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCC
Confidence             333333      379999999999999998775  4778899999999996533  2245667788888887665  45


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCCCCCce-EEEeccccCHHHHHHHHHHhCCCCCCCCCCCCCCCCcc--ccccchHHHHh
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESPAASGR-YLCTNGIYQFGDFAERVSKLFPEFPVHRFDGETQPGLI--PCKDAAKRLMD  299 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~~~~g~-~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~k~~~  299 (331)
                      ++.++|+|++|+|++++.+++++...|. |+++++.+++.|++++|.+.+|...++...........  ....+.++++.
T Consensus       241 ~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~~~~~~~~~~~~s~~~~k~  320 (342)
T d1y1pa1         241 MPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKS  320 (342)
T ss_dssp             CCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCHHHHHHHHH
T ss_pred             ccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCccCcccccccchHHHHHHHH
Confidence            6778999999999999999998877775 56777889999999999999987766544333221111  12223444478


Q ss_pred             hCCCc-cCHHHHHHHHHHHH
Q 020110          300 LGLVF-TPVEDAVRETVESL  318 (331)
Q Consensus       300 lG~~~-~~~~~~l~~~~~~~  318 (331)
                      |||.+ ++++++|+++++..
T Consensus       321 lg~~~~~~lee~i~d~I~s~  340 (342)
T d1y1pa1         321 LGRPGWRSIEESIKDLVGSE  340 (342)
T ss_dssp             TTCCSCCCHHHHHHHHHCCS
T ss_pred             cCCCCCcCHHHHHHHHHHhC
Confidence            99998 79999999998643

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1.6e-41  Score=302.02  Aligned_cols=305  Identities=19%  Similarity=0.154  Sum_probs=219.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHH-CCCCEEEEEecCC---Cccch----------hhc----CCCCCCCcEEEEEccCCCc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPG---SDSSH----------LFA----LPGAGDANLRVFEADVLDS   71 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~-~g~~~V~~~~r~~---~~~~~----------~~~----~~~~~~~~~~~~~~Dl~~~   71 (331)
                      |||||||||||||++|+++|++ .|+ +|+++++-.   .....          ...    ........+.++.+|++|.
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~-~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCC-EEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            4999999999999999999997 688 999987411   00000          000    0011112688999999999


Q ss_pred             hHHHHHhc---CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCC----CCc
Q 020110           72 GAVSRAVE---GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW----KGK  144 (331)
Q Consensus        72 ~~~~~~~~---~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~----~~~  144 (331)
                      +.+.++++   ++|+|||+|+..........+...++.|+.++.++++++++.++++++++||...++.....    ...
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            99988875   57999999998665434445677899999999999999999999999999987444332221    123


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCC--------ChhHHHHHHHH--
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--------NASCAVLQQLL--  214 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--------~~~~~~~~~~~--  214 (331)
                      ++.|+++..|.      ++|+.+|..+|++++.+.+.++++++++||+++|||......        ...+.++.++.  
T Consensus       162 ~~~e~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~  235 (383)
T d1gy8a_         162 PIDINAKKSPE------SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSD  235 (383)
T ss_dssp             CBCTTSCCBCS------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHH
T ss_pred             ccccccCCCCC------CHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhh
Confidence            45566655554      489999999999999999899999999999999999875421        12233333322  


Q ss_pred             --------------cCCCCc---------cCcCCCCceeHHHHHHHHHHhhcCC--------C-CCceEEE-eccccCHH
Q 020110          215 --------------QGSKDT---------QEYHWLGAVPVKDVAKAQVLLFESP--------A-ASGRYLC-TNGIYQFG  261 (331)
Q Consensus       215 --------------~~~~~~---------~~~~~~~~v~v~D~a~a~~~~l~~~--------~-~~g~~~~-~~~~~s~~  261 (331)
                                    .+.++.         .|.+.|||+|++|+|+++..+++..        . ..++||+ ++.++|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~  315 (383)
T d1gy8a_         236 IAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVR  315 (383)
T ss_dssp             HSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHH
T ss_pred             ccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHH
Confidence                          111111         2446789999999999999887531        1 1236866 56789999


Q ss_pred             HHHHHHHHhCCCCCCCCCCC-CCCCCccccccchHHH-HhhCCCc-cCHHHHHHHH-HHHHHHcC
Q 020110          262 DFAERVSKLFPEFPVHRFDG-ETQPGLIPCKDAAKRL-MDLGLVF-TPVEDAVRET-VESLKAKG  322 (331)
Q Consensus       262 e~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~l~~~-~~~~~~~~  322 (331)
                      |+++.+.+.++ .+.+.... ...........|++|+ +.|||+| .+++|+|+++ +.|++.+.
T Consensus       316 el~~~i~~~~~-~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~~  379 (383)
T d1gy8a_         316 EVIEVARKTTG-HPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHP  379 (383)
T ss_dssp             HHHHHHHHHHC-CCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCT
T ss_pred             HHHHHHHHHhC-CCCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhCc
Confidence            99999999984 33332222 2223345567799999 7799999 5999999887 58888763

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=4.2e-41  Score=296.58  Aligned_cols=304  Identities=18%  Similarity=0.156  Sum_probs=226.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   85 (331)
                      +.|||||||||||||++|+++|+++|+ +|++++|+......+.+...... +++++.+|++|++.+.++++  .+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~i~~~~~Dl~d~~~l~~~~~~~~~~~v~   84 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVAD-GMQSEIGDIRDQNKLLESIREFQPEIVF   84 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTT-TSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhccc-CCeEEEeeccChHhhhhhhhhchhhhhh
Confidence            458999999999999999999999999 99999998766544333222222 79999999999999988876  479999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      |+|+..........+...+.+|+.++.++++++++.+..++++.||+..++..... ..+..|+++..|.      ++|+
T Consensus        85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~~p~------~~y~  157 (356)
T d1rkxa_          85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW-IWGYRENEAMGGY------DPYS  157 (356)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS-SSCBCTTSCBCCS------SHHH
T ss_pred             hhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccccccc-ccccccccccCCC------Cccc
Confidence            99997665434456788999999999999999988765444444444455544432 3566777766665      4899


Q ss_pred             HHHHHHHHHHHHHHH---------HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc--cCcCCCCceeHHHH
Q 020110          166 VSKTLAEKAAWEFAE---------KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDV  234 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~---------~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~v~D~  234 (331)
                      .+|...|..+..+++         .+++.++++||+++|||++......+..++..+..+.++.  .+++.++++|++|+
T Consensus       158 ~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~  237 (356)
T d1rkxa_         158 NSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEP  237 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHH
T ss_pred             cccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccc
Confidence            999999999887765         3467899999999999987544445566677777666655  45588999999999


Q ss_pred             HHHHHHhhcCCCCCc-----eEE--E-eccccCHHHHHHHHHHhCCCCC-CCCCCCCCCCCccccccchHHH-HhhCCCc
Q 020110          235 AKAQVLLFESPAASG-----RYL--C-TNGIYQFGDFAERVSKLFPEFP-VHRFDGETQPGLIPCKDAAKRL-MDLGLVF  304 (331)
Q Consensus       235 a~a~~~~l~~~~~~g-----~~~--~-~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~-~~lG~~~  304 (331)
                      ++++..++......+     ..+  . .+...++.++++.+.+.++... ........+.....+..|++|+ +.|||+|
T Consensus       238 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw~P  317 (356)
T d1rkxa_         238 LSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHP  317 (356)
T ss_dssp             HHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCCC
T ss_pred             cchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCCCCCcCeeeEcHHHHHHHHCCCc
Confidence            999998887643322     122  2 2345899999999999984322 1111111123345567899999 7899999


Q ss_pred             -cCHHHHHHHHHHHHHH
Q 020110          305 -TPVEDAVRETVESLKA  320 (331)
Q Consensus       305 -~~~~~~l~~~~~~~~~  320 (331)
                       .+++++|+++++||+.
T Consensus       318 ~~~l~egi~~ti~wyk~  334 (356)
T d1rkxa_         318 RWNLNTTLEYIVGWHKN  334 (356)
T ss_dssp             CCCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHH
Confidence             6999999999999986

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=1.3e-40  Score=291.19  Aligned_cols=300  Identities=15%  Similarity=0.149  Sum_probs=220.4

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC--CccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEEE
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG--SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFH   86 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vih   86 (331)
                      ||||||||||||++|+++|+++|+ +|+++++-.  .....+..+.. .+ +++++.+|+++.+.+.+++++  +|+|||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~-~~-~~~~i~~Di~~~~~l~~~~~~~~~d~Vih   78 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSS-LG-NFEFVHGDIRNKNDVTRLITKYMPDSCFH   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHT-TC-CCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhc-cC-CcEEEEcccCCHHHHHHHHHhcCCceEEe
Confidence            799999999999999999999999 999987522  22222211111 11 789999999999999999875  599999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCC--------------ccccCCCCC
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKG--------------KVFDETSWT  152 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~--------------~~~~E~~~~  152 (331)
                      +|+.........++...+++|+.|+.+|++++.+.+++++|++||+.++++......              ....+.++.
T Consensus        79 ~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (338)
T d1orra_          79 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL  158 (338)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred             ecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcc
Confidence            999876533344568889999999999999999999988888888777776554311              011112222


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC--CChhHHHHHHHHc-----CCCCc-c--C
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQ-----GSKDT-Q--E  222 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~--~~~~~~~~~~~~~-----~~~~~-~--~  222 (331)
                      .      +.+.|+.+|...|.+...+.+.++....++|++++|++.....  ......++.++..     ++++. +  |
T Consensus       159 ~------~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  232 (338)
T d1orra_         159 D------FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG  232 (338)
T ss_dssp             C------CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSS
T ss_pred             c------cccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCC
Confidence            2      3347999999999999999989999999999999998765332  1233444444332     44444 3  4


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCCC-CCc-eEEEe---ccccCHHHHHHHHHHhCCCCCCCC-CCCCCCCCccccccchHH
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESPA-ASG-RYLCT---NGIYQFGDFAERVSKLFPEFPVHR-FDGETQPGLIPCKDAAKR  296 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~~-~~g-~~~~~---~~~~s~~e~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~k  296 (331)
                      .+.++|+|++|++++++.++++.. ..| +|++.   +..+++.|+++.+.+.++. +.+. ..............|++|
T Consensus       233 ~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k  311 (338)
T d1orra_         233 KQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI-DMRFTNLPVRESDQRVFVADIKK  311 (338)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTC-CCCEEEECCCSSCCSEECBCCHH
T ss_pred             ceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCC-CceeEeCCCCCCCcCeeeECHHH
Confidence            478999999999999999997753 333 66652   3458999999999999843 2221 111122334446679999


Q ss_pred             H-HhhCCCc-cCHHHHHHHHHHHHHH
Q 020110          297 L-MDLGLVF-TPVEDAVRETVESLKA  320 (331)
Q Consensus       297 ~-~~lG~~~-~~~~~~l~~~~~~~~~  320 (331)
                      + +.|||+| .+++|+|+++++|++.
T Consensus       312 ~~~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         312 ITNAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             HHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence            9 7899999 5999999999999985

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=1.2e-37  Score=265.29  Aligned_cols=268  Identities=16%  Similarity=0.107  Sum_probs=210.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~   87 (331)
                      |||||||||||||++|+++|.++|| +|++++|+.                     +|++|.+++.++++  ++|+|||+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~~~d~vih~   59 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNV-EVIPTDVQD---------------------LDITNVLAVNKFFNEKKPNVVINC   59 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT---------------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh---------------------ccCCCHHHHHHHHHHcCCCEEEee
Confidence            4799999999999999999999999 999997642                     58899999999886  57999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      |+......+...+......|+.....+.+.+.... ..+++.||+ .+++....  .+..|.++..+..      .|+.+
T Consensus        60 a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~-~v~~~~~~--~~~~e~~~~~~~~------~~~~~  129 (281)
T d1vl0a_          60 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTD-YVFDGEAK--EPITEFDEVNPQS------AYGKT  129 (281)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEG-GGSCSCCS--SCBCTTSCCCCCS------HHHHH
T ss_pred             ccccccccccccchhhccccccccccccccccccc-ccccccccc-eeeecccc--ccccccccccchh------hhhhh
Confidence            99876544445567778889999999988887765 467777776 45554443  6788888776654      89999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      |...|+.++    +.+.+++++||+++||++.    .....++..+..+.... .+++.++++|++|+++++..++++..
T Consensus       130 k~~~e~~~~----~~~~~~~i~R~~~vyG~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~  201 (281)
T d1vl0a_         130 KLEGENFVK----ALNPKYYIVRTAWLYGDGN----NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN  201 (281)
T ss_dssp             HHHHHHHHH----HHCSSEEEEEECSEESSSS----CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC
T ss_pred             hhHHHHHHH----HhCCCccccceeEEeCCCc----ccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcc
Confidence            999998886    5678999999999999974    34556677777776665 77889999999999999999998764


Q ss_pred             CCceEE-EeccccCHHHHHHHHHHhCCCCCCCCCC---CCCC---CCccccccchHHH-HhhCCCccCHHHHHHHHHHHH
Q 020110          247 ASGRYL-CTNGIYQFGDFAERVSKLFPEFPVHRFD---GETQ---PGLIPCKDAAKRL-MDLGLVFTPVEDAVRETVESL  318 (331)
Q Consensus       247 ~~g~~~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~k~-~~lG~~~~~~~~~l~~~~~~~  318 (331)
                       .|.|+ ++++.+|+.|+++.+++.++ .+....+   .+..   ..+....+|++|+ +.+||++++++++|+++++|+
T Consensus       202 -~g~~~~~~~~~~s~~e~~~~i~~~~g-~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~~~~~~l~~~l~~l  279 (281)
T d1vl0a_         202 -YGTFHCTCKGICSWYDFAVEIFRLTG-IDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLL  279 (281)
T ss_dssp             -CEEEECCCBSCEEHHHHHHHHHHHHC-CCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHH
T ss_pred             -cCceeEeCCCccchHHHHHHHHHHhC-CCceEEeccHHHcCCcCCCccccccCHHHHHHHhCCCCCCHHHHHHHHHHHh
Confidence             46774 56677999999999999984 2222111   1100   0112334799999 779999999999999999998


Q ss_pred             H
Q 020110          319 K  319 (331)
Q Consensus       319 ~  319 (331)
                      |
T Consensus       280 ~  280 (281)
T d1vl0a_         280 Q  280 (281)
T ss_dssp             T
T ss_pred             c
Confidence            5

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-35  Score=255.24  Aligned_cols=284  Identities=18%  Similarity=0.125  Sum_probs=187.8

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc--cchhhcCCCCCCCcEEEEEccCCCchHH-HHHh-----cCccE
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAV-SRAV-----EGCKG   83 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~-~~~~-----~~~d~   83 (331)
                      |||||||||||++|+++|+++|+.+|+++++-...  ...+.+.          ...|..+.+.. ....     ..+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL----------NIADYMDKEDFLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTS----------CCSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccccc----------chhhhccchHHHHHHhhhhcccchhh
Confidence            89999999999999999999995378888642221  1112111          11222222222 2222     35799


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (331)
                      |+|+|+....  ...+.......|+.++.+++++++..+++ +|+.||..++++...   .+..|+.+..|.      +.
T Consensus        72 i~~~aa~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~---~~~~~~~~~~~~------~~  139 (307)
T d1eq2a_          72 IFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTS---DFIESREYEKPL------NV  139 (307)
T ss_dssp             EEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCS---CBCSSGGGCCCS------SH
T ss_pred             hhhhcccccc--ccccccccccccccccccccccccccccc-ccccccccccccccc---cccccccccccc------cc
Confidence            9999986554  34456777888899999999999999886 666676645544322   233343333333      58


Q ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCC---CChhHHHHHHHHcCCCCc--cC--cCCCCceeHHHHHH
Q 020110          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDT--QE--YHWLGAVPVKDVAK  236 (331)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~--~~--~~~~~~v~v~D~a~  236 (331)
                      |+.+|..+|.+++.++++++++++++||+++|||.....   ......++.++..++...  .|  +..++|+|++|+++
T Consensus       140 Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~  219 (307)
T d1eq2a_         140 YGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  219 (307)
T ss_dssp             HHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred             cccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHH
Confidence            999999999999999999999999999999999976432   123445566676666543  23  36899999999999


Q ss_pred             HHHHhhcCCCCCceEE-EeccccCHHHHHHHHHHhCCCCCCCCCCCC---CCCCccccccchHHH-HhhCCCc-cCHHHH
Q 020110          237 AQVLLFESPAASGRYL-CTNGIYQFGDFAERVSKLFPEFPVHRFDGE---TQPGLIPCKDAAKRL-MDLGLVF-TPVEDA  310 (331)
Q Consensus       237 a~~~~l~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~k~-~~lG~~~-~~~~~~  310 (331)
                      ++..++.+.. .+.|+ +++...|++|+++.+.+..+...+...+..   ..........|++|+ +.+||+| ++|+|+
T Consensus       220 ~~~~~~~~~~-~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~eg  298 (307)
T d1eq2a_         220 VNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEG  298 (307)
T ss_dssp             HHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHH
T ss_pred             HHHHHhhhcc-ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCCHHHH
Confidence            9999988664 45665 467889999999999887643333221111   111233345689999 7789999 699999


Q ss_pred             HHHHHHHH
Q 020110          311 VRETVESL  318 (331)
Q Consensus       311 l~~~~~~~  318 (331)
                      |+++++|+
T Consensus       299 i~~~i~w~  306 (307)
T d1eq2a_         299 VTEYMAWL  306 (307)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhC
Confidence            99999996

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=100.00  E-value=3.3e-34  Score=245.75  Aligned_cols=277  Identities=15%  Similarity=0.125  Sum_probs=200.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC--ccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vih~   87 (331)
                      |||||||||||||++|+++|.+.|+ .|.+ .++...                 +.+|++|.+.+.+++++  +|+|||+
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~-~~~~~~-----------------~~~Dl~~~~~~~~~i~~~~~D~Vih~   61 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGN-LIAL-DVHSKE-----------------FCGDFSNPKGVAETVRKLRPDVIVNA   61 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSE-EEEE-CTTCSS-----------------SCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEE-ECCCcc-----------------ccCcCCCHHHHHHHHHHcCCCEEEEe
Confidence            4799999999999999999998886 5544 433221                 24899999999998874  6999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      ||......+...+...++.|+.++.+|++++++.+. +++++||+.. |+...  ..|++|+++..|..      .|+.+
T Consensus        62 Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~-~~~~~--~~~~~E~~~~~p~~------~y~~~  131 (298)
T d1n2sa_          62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYV-FPGTG--DIPWQETDATSPLN------VYGKT  131 (298)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGG-SCCCT--TCCBCTTSCCCCSS------HHHHH
T ss_pred             cccccccccccCccccccccccccccchhhhhcccc-cccccccccc-ccCCC--CCCCccccccCCCc------hHhhh
Confidence            998766556677888999999999999999998875 6888888744 44333  37889998877664      89999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHhhc---
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFE---  243 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~---  243 (331)
                      |..+|+.+..    ......++|++..++....   .....+...+..+..+. .++..++++|++|+++++..++.   
T Consensus       132 k~~~e~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~  204 (298)
T d1n2sa_         132 KLAGEKALQD----NCPKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVAL  204 (298)
T ss_dssp             HHHHHHHHHH----HCSSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhHHh----hhcccccccccceeeccCC---ccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhh
Confidence            9999998874    3345566666666544321   23333444555555544 56678899999999999987765   


Q ss_pred             -CCCCCceEEEec-cccCHHHHHHHHHHhCC----CCCCCC----CCCCC--C-CCccccccchHHH-HhhCCCccCHHH
Q 020110          244 -SPAASGRYLCTN-GIYQFGDFAERVSKLFP----EFPVHR----FDGET--Q-PGLIPCKDAAKRL-MDLGLVFTPVED  309 (331)
Q Consensus       244 -~~~~~g~~~~~~-~~~s~~e~~~~i~~~~~----~~~~~~----~~~~~--~-~~~~~~~~~~~k~-~~lG~~~~~~~~  309 (331)
                       .....++|++++ +..++.|+++.+.+..+    ...++.    ...+.  . ..+....+|++|+ +.+||+|+++++
T Consensus       205 ~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~~~~~  284 (298)
T d1n2sa_         205 NKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWEL  284 (298)
T ss_dssp             HCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBHHH
T ss_pred             ccccccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCCcHHH
Confidence             334456887655 66899999999887642    111110    00000  0 0112346799999 779999999999


Q ss_pred             HHHHHHHHHHHcC
Q 020110          310 AVRETVESLKAKG  322 (331)
Q Consensus       310 ~l~~~~~~~~~~~  322 (331)
                      +|+++++++....
T Consensus       285 gl~~~i~~~~~~~  297 (298)
T d1n2sa_         285 GVKRMLTEMFTTT  297 (298)
T ss_dssp             HHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhhc
Confidence            9999999987653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.2e-31  Score=216.55  Aligned_cols=209  Identities=16%  Similarity=0.092  Sum_probs=160.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +|+|||||||||||++|+++|+++|. .+|++++|++.........      +++...+|+.+.+++.++++++|+|||+
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~------~i~~~~~D~~~~~~~~~~~~~~d~vi~~   87 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYK------NVNQEVVDFEKLDDYASAFQGHDVGFCC   87 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGG------GCEEEECCGGGGGGGGGGGSSCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccc------eeeeeeeccccccccccccccccccccc
Confidence            46899999999999999999999983 2899999977543332211      7888889999999999999999999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      ++....   ..+...+.++|+.++.+++++|++.++++|||+||..+ +...                     .+.|+.+
T Consensus        88 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~-~~~~---------------------~~~Y~~~  142 (232)
T d2bkaa1          88 LGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA-DKSS---------------------NFLYLQV  142 (232)
T ss_dssp             CCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC-CTTC---------------------SSHHHHH
T ss_pred             cccccc---ccchhhhhhhcccccceeeecccccCccccccCCcccc-ccCc---------------------cchhHHH
Confidence            986432   22346778999999999999999999999999998743 2211                     1379999


Q ss_pred             HHHHHHHHHHHHHHcCC-eEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          168 KTLAEKAAWEFAEKHGV-DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~-~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      |..+|+.+.    +.++ +++|+||+.+||+....  .....+..+.....+  .+......||++|+|++++.++..+.
T Consensus       143 K~~~E~~l~----~~~~~~~~IlRP~~i~G~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         143 KGEVEAKVE----ELKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLP--DSWASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             HHHHHHHHH----TTCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHCSCC--TTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             HHHhhhccc----cccccceEEecCceeecCCCcC--cHHHHHHHHHhhccC--CcccCCCeEEHHHHHHHHHHHHhcCc
Confidence            999999886    5566 48999999999997543  223333444433322  22234457999999999999998887


Q ss_pred             CCceEEEecc
Q 020110          247 ASGRYLCTNG  256 (331)
Q Consensus       247 ~~g~~~~~~~  256 (331)
                      ..+.+++++.
T Consensus       215 ~~~~~i~~~~  224 (232)
T d2bkaa1         215 DKQMELLENK  224 (232)
T ss_dssp             CSSEEEEEHH
T ss_pred             cCCeEEEcHH
Confidence            7777777653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-30  Score=208.94  Aligned_cols=200  Identities=16%  Similarity=0.112  Sum_probs=153.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      .||||+||||||+||++++++|+++|+ +|++++|++.+.......      +++++.+|++|.+++.++++++|+|||+
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~------~~~~~~gD~~d~~~l~~al~~~d~vi~~   74 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPR------PAHVVVGDVLQAADVDKTVAGQDAVIVL   74 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCC------CSEEEESCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhccccccc------ccccccccccchhhHHHHhcCCCEEEEE
Confidence            378999999999999999999999999 999999987654332221      7899999999999999999999999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      ++....       .....++..++.++++++++++++|||++||...++.....         +  +.     ...|...
T Consensus        75 ~g~~~~-------~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~---------~--~~-----~~~~~~~  131 (205)
T d1hdoa_          75 LGTRND-------LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV---------P--PR-----LQAVTDD  131 (205)
T ss_dssp             CCCTTC-------CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS---------C--GG-----GHHHHHH
T ss_pred             eccCCc-------hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc---------c--cc-----ccccchH
Confidence            986432       22335677899999999999999999999987443321111         0  11     1268888


Q ss_pred             HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCCCC
Q 020110          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA  247 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~  247 (331)
                      |..+|++++    +.+++++++||+.+++........             ....+.....+|+++|+|++++.+++++..
T Consensus       132 ~~~~e~~l~----~~~~~~tiirp~~~~~~~~~~~~~-------------~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~  194 (205)
T d1hdoa_         132 HIRMHKVLR----ESGLKYVAVMPPHIGDQPLTGAYT-------------VTLDGRGPSRVISKHDLGHFMLRCLTTDEY  194 (205)
T ss_dssp             HHHHHHHHH----HTCSEEEEECCSEEECCCCCSCCE-------------EESSSCSSCSEEEHHHHHHHHHHTTSCSTT
T ss_pred             HHHHHHHHH----hcCCceEEEecceecCCCCcccEE-------------EeeCCCCCCCcCCHHHHHHHHHHHhCCCCC
Confidence            999998775    689999999999998754321100             011344667899999999999999998876


Q ss_pred             Cc-eEEEe
Q 020110          248 SG-RYLCT  254 (331)
Q Consensus       248 ~g-~~~~~  254 (331)
                      .| .+..+
T Consensus       195 ~g~~~~~s  202 (205)
T d1hdoa_         195 DGHSTYPS  202 (205)
T ss_dssp             TTCEEEEE
T ss_pred             CCEEEecC
Confidence            56 34433

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.96  E-value=1.9e-29  Score=217.13  Aligned_cols=230  Identities=15%  Similarity=0.100  Sum_probs=159.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh--hcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL--FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ++||||||||||||++|+++|+++|| +|++++|+.......  .........+++++.+|+.|.+.+.+.++++++++|
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            45899999999999999999999999 999999976543221  110000011789999999999999999999999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +++....           ..|..+..++++++++.+..++++.||.+. +..        .+..+..+.      ..|..
T Consensus        82 ~~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~-~~~--------~~~~~~~~~------~~~~~  135 (312)
T d1qyda_          82 ALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGM-DPD--------IMEHALQPG------SITFI  135 (312)
T ss_dssp             CCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSS-CTT--------SCCCCCSST------THHHH
T ss_pred             hhhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccc-cCC--------Ccccccchh------hhhhH
Confidence            9875432           223445668888998887778888887532 211        111111111      25666


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHHHHHHHhhc
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVLLFE  243 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~~~~l~  243 (331)
                      .|..+++.    .+..+++++++||+.+||+..........   .....+..+.   .+++.++|+|++|+|++++.++.
T Consensus       136 ~~~~~~~~----~~~~~~~~~i~r~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~  208 (312)
T d1qyda_         136 DKRKVRRA----IEAASIPYTYVSSNMFAGYFAGSLAQLDG---HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSID  208 (312)
T ss_dssp             HHHHHHHH----HHHTTCCBCEEECCEEHHHHTTTSSCTTC---CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTT
T ss_pred             HHHHHHHh----hcccccceEEeccceeecCCccchhhHHH---HhhhcccccccccccccccceeeHHHHHHHHHHHhc
Confidence            66655554    44789999999999999975432111110   0011122222   35688999999999999999998


Q ss_pred             CCCCCc-e-EEEec-cccCHHHHHHHHHHhCC
Q 020110          244 SPAASG-R-YLCTN-GIYQFGDFAERVSKLFP  272 (331)
Q Consensus       244 ~~~~~g-~-~~~~~-~~~s~~e~~~~i~~~~~  272 (331)
                      ++...+ . |++++ ..+|++|+++.+.+.++
T Consensus       209 ~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g  240 (312)
T d1qyda_         209 DPQTLNKTMYIRPPMNILSQKEVIQIWERLSE  240 (312)
T ss_dssp             CGGGSSSEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             CccccCceEEEeCCCcCCCHHHHHHHHHHHHC
Confidence            876554 4 55554 56899999999999873

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=1e-27  Score=199.24  Aligned_cols=229  Identities=21%  Similarity=0.165  Sum_probs=162.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCC-EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .|++|||||||||||++++++|+++|+. .|+++.|++.....+..       +++++.+|+.+.+.+.++++++|+|||
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-------~~~~~~~d~~~~~~~~~~~~~~d~vi~   74 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-------EADVFIGDITDADSINPAFQGIDALVI   74 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-------CTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-------CcEEEEeeeccccccccccccceeeEE
Confidence            4789999999999999999999999961 56777777654433322       678999999999999999999999999


Q ss_pred             cccCCCCCC-------------CCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           87 VASPCTLED-------------PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        87 ~a~~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      +|+......             ..........+|+.++.+++..+.....+.+.+.|+.......              .
T Consensus        75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~--------------~  140 (252)
T d2q46a1          75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD--------------H  140 (252)
T ss_dssp             CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT--------------C
T ss_pred             EEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCC--------------c
Confidence            998654211             1122456678899999999999998888889988875321110              0


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHH
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  233 (331)
                      +.. ......|...+...+..    ....+++++++||+++||+...... .        ..+..........+++|++|
T Consensus       141 ~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~ilRp~~v~g~~~~~~~-~--------~~~~~~~~~~~~~~~i~~~D  206 (252)
T d2q46a1         141 PLN-KLGNGNILVWKRKAEQY----LADSGTPYTIIRAGGLLDKEGGVRE-L--------LVGKDDELLQTDTKTVPRAD  206 (252)
T ss_dssp             GGG-GGGGCCHHHHHHHHHHH----HHHSSSCEEEEEECEEECSCTTSSC-E--------EEESTTGGGGSSCCEEEHHH
T ss_pred             ccc-cccccchhhhhhhhhhh----hhcccccceeecceEEECCCcchhh-h--------hhccCcccccCCCCeEEHHH
Confidence            111 01112455555554444    4478999999999999999753211 1        11122223345678999999


Q ss_pred             HHHHHHHhhcCCCCCc-eEEEec-c---ccCHHHHHHHHHHhC
Q 020110          234 VAKAQVLLFESPAASG-RYLCTN-G---IYQFGDFAERVSKLF  271 (331)
Q Consensus       234 ~a~a~~~~l~~~~~~g-~~~~~~-~---~~s~~e~~~~i~~~~  271 (331)
                      +|++++.++.++...| +|++++ .   ..+++|+.+++.+..
T Consensus       207 va~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~  249 (252)
T d2q46a1         207 VAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVT  249 (252)
T ss_dssp             HHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred             HHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence            9999999999887776 686543 2   256778877776554

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=1.3e-27  Score=204.74  Aligned_cols=224  Identities=15%  Similarity=0.166  Sum_probs=158.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC---CCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL---PGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      +|||||||||||||++++++|++.|+ +|++++|++.........   ......+++++.+|+.+...+.+.+++++.|+
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            57999999999999999999999999 999999976553322110   00001168899999999999999999999999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchh
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (331)
                      |+++...               ..+..+++++++..+++++++.||... ..         ++.....+.      ..+.
T Consensus        82 ~~~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~s~~~~-~~---------~~~~~~~~~------~~~~  130 (307)
T d1qyca_          82 STVGSLQ---------------IESQVNIIKAIKEVGTVKRFFPSEFGN-DV---------DNVHAVEPA------KSVF  130 (307)
T ss_dssp             ECCCGGG---------------SGGGHHHHHHHHHHCCCSEEECSCCSS-CT---------TSCCCCTTH------HHHH
T ss_pred             ecccccc---------------cchhhHHHHHHHHhccccceeeecccc-cc---------ccccccccc------cccc
Confidence            9986532               123457888888888888999887522 11         111111111      1455


Q ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc---cCcCCCCceeHHHHHHHHHHhh
Q 020110          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVLLF  242 (331)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~D~a~a~~~~l  242 (331)
                      ..+...+..+    ++.+++++++||+.+||+.......    ++.....+....   .+++.++|+|++|+|++++.++
T Consensus       131 ~~~~~~~~~~----~~~~~~~~i~r~~~v~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  202 (307)
T d1qyca_         131 EVKAKVRRAI----EAEGIPYTYVSSNCFAGYFLRSLAQ----AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAV  202 (307)
T ss_dssp             HHHHHHHHHH----HHHTCCBEEEECCEEHHHHTTTTTC----TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTS
T ss_pred             cccccccchh----hccCCCceecccceecCCCccchhh----hhhhhhhcccceeeecccccccCCcHHHHHHHHHHHh
Confidence            5555555544    3778999999999999986533111    111122222222   3568899999999999999999


Q ss_pred             cCCCCCc--eEEE-eccccCHHHHHHHHHHhCC
Q 020110          243 ESPAASG--RYLC-TNGIYQFGDFAERVSKLFP  272 (331)
Q Consensus       243 ~~~~~~g--~~~~-~~~~~s~~e~~~~i~~~~~  272 (331)
                      ..+...+  .|++ +++.+|+.|+++.+.+.+|
T Consensus       203 ~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G  235 (307)
T d1qyca_         203 DDPRTLNKTLYLRLPANTLSLNELVALWEKKID  235 (307)
T ss_dssp             SCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTT
T ss_pred             cChhhcCceeEEeCCCCccCHHHHHHHHHHHHC
Confidence            8876554  4555 4577999999999999984

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=4e-27  Score=191.40  Aligned_cols=192  Identities=18%  Similarity=0.159  Sum_probs=134.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCC-EEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh-cCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-EGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vih~   87 (331)
                      |+|||||||||||++|+++|+++|+. +|+++.|++.....          .+.   .+..|..++...+ ..+|+|||+
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~----------~~~---~~~~d~~~~~~~~~~~~d~vi~~   69 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP----------RLD---NPVGPLAELLPQLDGSIDTAFCC   69 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCT----------TEE---CCBSCHHHHGGGCCSCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcc----------ccc---ccccchhhhhhccccchheeeee
Confidence            69999999999999999999999962 57777766533211          333   3344434443333 358999999


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHH
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (331)
                      +|....  .........+.|+.++.+++++|++.++++|+|+||..+ ++...                     +.|+.+
T Consensus        70 ~g~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~-~~~~~---------------------~~y~~~  125 (212)
T d2a35a1          70 LGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGA-DAKSS---------------------IFYNRV  125 (212)
T ss_dssp             CCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC-CTTCS---------------------SHHHHH
T ss_pred             eeeecc--ccccccccccchhhhhhhccccccccccccccccccccc-ccccc---------------------cchhHH
Confidence            876532  123346788999999999999999999999999998743 22111                     379999


Q ss_pred             HHHHHHHHHHHHHHcCC-eEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          168 KTLAEKAAWEFAEKHGV-DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       168 K~~~e~~~~~~~~~~~~-~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      |..+|+.++    +.+. +++++||+.+||+.......   ..     ...++. .....+..||++|+|++++.++.++
T Consensus       126 K~~~E~~l~----~~~~~~~~I~Rp~~v~G~~~~~~~~---~~-----~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~  193 (212)
T d2a35a1         126 KGELEQALQ----EQGWPQLTIARPSLLFGPREEFRLA---EI-----LAAPIARILPGKYHGIEACDLARALWRLALEE  193 (212)
T ss_dssp             HHHHHHHHT----TSCCSEEEEEECCSEESTTSCEEGG---GG-----TTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHhhhcc----ccccccceeeCCcceeCCcccccHH---HH-----HHHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence            999999886    4555 69999999999997543111   00     011111 1123345699999999999999876


Q ss_pred             CCCceE
Q 020110          246 AASGRY  251 (331)
Q Consensus       246 ~~~g~~  251 (331)
                      . .|.+
T Consensus       194 ~-~g~~  198 (212)
T d2a35a1         194 G-KGVR  198 (212)
T ss_dssp             C-SEEE
T ss_pred             C-CCCE
Confidence            5 4543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.91  E-value=2.1e-24  Score=188.66  Aligned_cols=225  Identities=16%  Similarity=0.103  Sum_probs=158.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchH-HHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA-VSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~vih   86 (331)
                      +.|+|+|||||||||++|+++|++.|| +|++++|++.......-. . .. +++++++|+.|..+ +.+++.++|++++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~-~-~~-~v~~~~gD~~d~~~~~~~a~~~~~~~~~   77 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQ-A-IP-NVTLFQGPLLNNVPLMDTLFEGAHLAFI   77 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHH-T-ST-TEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcchhhhhhhc-c-cC-CCEEEEeeCCCcHHHHHHHhcCCceEEe
Confidence            357999999999999999999999999 999999987654321110 0 11 79999999998654 6778888999887


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhH
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (331)
                      +.....            ..++..+.+++++|++.+++++++.||..........                  +..+|..
T Consensus        78 ~~~~~~------------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~------------------~~~~~~~  127 (350)
T d1xgka_          78 NTTSQA------------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPW------------------PAVPMWA  127 (350)
T ss_dssp             CCCSTT------------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSC------------------CCCTTTH
T ss_pred             eccccc------------chhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcc------------------cchhhhh
Confidence            654211            2355678899999999999888888886332211110                  1136788


Q ss_pred             HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCC---C-ccCcCCCCceeH-HHHHHHHHHh
Q 020110          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK---D-TQEYHWLGAVPV-KDVAKAQVLL  241 (331)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~v~v-~D~a~a~~~~  241 (331)
                      +|...++.+.    +.+++++++|++.+++...........  ......+..   . ..++..++++++ +|+++++..+
T Consensus       128 ~k~~~~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~  201 (350)
T d1xgka_         128 PKFTVENYVR----QLGLPSTFVYAGIYNNNFTSLPYPLFQ--MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQI  201 (350)
T ss_dssp             HHHHHHHHHH----TSSSCEEEEEECEEGGGCBSSSCSSCB--EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHH
T ss_pred             hHHHHHHHHH----hhccCceeeeeceeecccccccccccc--ccccccccceeeecccCCCcceEEEeHHHHHHHHHHH
Confidence            8888877665    678999999999988764322111100  000011111   1 135577788876 7999999999


Q ss_pred             hcCCC--CCc-eEEEeccccCHHHHHHHHHHhCC
Q 020110          242 FESPA--ASG-RYLCTNGIYQFGDFAERVSKLFP  272 (331)
Q Consensus       242 l~~~~--~~g-~~~~~~~~~s~~e~~~~i~~~~~  272 (331)
                      +....  ..| +|+++++.+|+.|+++.+.+.+|
T Consensus       202 l~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~G  235 (350)
T d1xgka_         202 FKDGPQKWNGHRIALTFETLSPVQVCAAFSRALN  235 (350)
T ss_dssp             HHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHT
T ss_pred             HhCChhhcCCeEEEEeCCcCCHHHHHHHHHHHHC
Confidence            86542  245 67888888999999999999874

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=4.8e-22  Score=164.84  Aligned_cols=227  Identities=17%  Similarity=0.163  Sum_probs=160.7

Q ss_pred             CCccc--ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHH
Q 020110            1 MASEA--EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRA   77 (331)
Q Consensus         1 m~~~~--~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~   77 (331)
                      |..|.  +.+.|++|||||++.||++++++|+++|+ +|++.+|+........+ +...++ ++.++.+|++++++++++
T Consensus         1 m~~~d~m~L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~-~~~~~~~Dvs~~~~~~~~   78 (255)
T d1fmca_           1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSAL   78 (255)
T ss_dssp             CCCGGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHH
Confidence            44443  34678999999999999999999999999 99999997654333322 111122 789999999999888776


Q ss_pred             hc-------CccEEEEcccCCCCC---CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCC
Q 020110           78 VE-------GCKGVFHVASPCTLE---DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKG  143 (331)
Q Consensus        78 ~~-------~~d~vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~  143 (331)
                      ++       .+|++||+||.....   ...++++..+++|+.++..+.+++..    .+-.++|++||..+..+.++.  
T Consensus        79 ~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~--  156 (255)
T d1fmca_          79 ADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM--  156 (255)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC--
T ss_pred             HHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccccc--
Confidence            64       589999999976542   23344678899999999988886633    345579999997654443332  


Q ss_pred             ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc
Q 020110          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (331)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (331)
                                        ..|+.+|...+.+.+.++.+   +|+++..+-||.+..+.......  ......+....+. 
T Consensus       157 ------------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~--~e~~~~~~~~~pl-  215 (255)
T d1fmca_         157 ------------------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT--PEIEQKMLQHTPI-  215 (255)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC--HHHHHHHHHTCSS-
T ss_pred             ------------------ccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCC--HHHHHHHHhcCCC-
Confidence                              37999999999999888755   48999999999997764322211  2233333333222 


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEeccc
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTNGI  257 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~~  257 (331)
                           .-+..++|+|.++++++...  ...|. ..+.|+.
T Consensus       216 -----~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         216 -----RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             -----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             -----CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence                 23567899999999988543  34674 4555543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=1.5e-21  Score=159.96  Aligned_cols=209  Identities=21%  Similarity=0.129  Sum_probs=150.3

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.+.|++|||||++.||+.++++|+++|+ +|++.+|+.....           ++..+++|++|+++++++++      
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPK-----------GLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCT-----------TSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhc-----------CceEEEEecCCHHHHHHHHHHHHHhc
Confidence            45678999999999999999999999999 9999999765422           56678999999998887764      


Q ss_pred             -CccEEEEcccCCCC----CCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       .+|++||+||....    +...++++..+++|+.++..+.+++    ++.+..++|++||..+..+.++.         
T Consensus        72 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~---------  142 (237)
T d1uzma1          72 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ---------  142 (237)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CC---------
T ss_pred             CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCccc---------
Confidence             47999999997654    2234556888999999988887754    44566689999998665443332         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+   +|+++..+.||.+..+.....   ............      ...-
T Consensus       143 -----------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~------pl~R  202 (237)
T d1uzma1         143 -----------ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQFI------PAKR  202 (237)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---CHHHHHHHGGGC------TTCS
T ss_pred             -----------HHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc---CHHHHHHHHhcC------CCCC
Confidence                       37999999999988888755   489999999999977642211   111122222211      1234


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          228 AVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      +...+|+|.++++++...  ..+|.. .+.|
T Consensus       203 ~~~pedvA~~v~fL~S~~s~~itG~~i~vdG  233 (237)
T d1uzma1         203 VGTPAEVAGVVSFLASEDASYISGAVIPVDG  233 (237)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            678999999999988543  346744 4443

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=1.7e-21  Score=160.04  Aligned_cols=212  Identities=16%  Similarity=0.156  Sum_probs=155.0

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||+++++.|+++|+ +|++.+|++.....+.+...  + ++.++.+|++|+++++++++       
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELA--D-AARYVHLDVTQPAQWKAAVDTAVTAFG   79 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTG--G-GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhh--C-cceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999 99999998755443332211  1 78899999999998887764       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      .+|++||+||.....    ...+++...+++|+.++..+.+++.    +.+-.++|++||..+..+.++.          
T Consensus        80 ~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~----------  149 (244)
T d1nffa_          80 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC----------  149 (244)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB----------
T ss_pred             CCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccc----------
Confidence            479999999976542    2334468889999999999888653    3345689999998664433322          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++.+   +|+++..+-||.+-.+.......            . . .......+
T Consensus       150 ----------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~------------~-~-~~~pl~R~  205 (244)
T d1nffa_         150 ----------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE------------D-I-FQTALGRA  205 (244)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT------------T-C-SCCSSSSC
T ss_pred             ----------cchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH------------H-H-HhccccCC
Confidence                      27999999999999888755   48999999999998765321100            0 0 00112347


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          229 VPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                      ..++|+|+++++++...  ...|. +.+.|+
T Consensus       206 ~~p~diA~~v~fL~s~~s~~itG~~i~vDGG  236 (244)
T d1nffa_         206 AEPVEVSNLVVYLASDESSYSTGAEFVVDGG  236 (244)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhChhhCCCcCCEEEECCC
Confidence            88999999999988543  34674 455443

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.87  E-value=1.3e-21  Score=161.97  Aligned_cols=218  Identities=16%  Similarity=0.118  Sum_probs=156.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      ..|.+|||||++.||++++++|.++|+ +|++.+|+........+.....+.++..+.+|++|++++.++++       .
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            467999999999999999999999999 99999997655433332211112278999999999998887774       5


Q ss_pred             ccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|++||+|+......    ..+++...+++|+.++..+.+++.    +.+-.++|++||..+..+.++.           
T Consensus        88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~-----------  156 (251)
T d2c07a1          88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ-----------  156 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC-----------
T ss_pred             ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCC-----------
Confidence            799999998765422    234568889999999988888653    3355789999998765544332           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCce
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  229 (331)
                               ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+.....   .......+....+.      .-+.
T Consensus       157 ---------~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~---~~~~~~~~~~~~pl------~R~~  218 (251)
T d2c07a1         157 ---------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIPA------GRMG  218 (251)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCTT------SSCB
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc---CHHHHHHHHhcCCC------CCCc
Confidence                     37999999999999888755   489999999999988764321   22333333333222      2367


Q ss_pred             eHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          230 PVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       230 ~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      ..+|+|.++++++...  ...|.. .+.|
T Consensus       219 ~pedvA~~v~fL~S~~s~~itG~~i~vDG  247 (251)
T d2c07a1         219 TPEEVANLACFLSSDKSGYINGRVFVIDG  247 (251)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhCchhCCCcCcEEEECC
Confidence            8999999999888543  346644 4443

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2e-21  Score=160.09  Aligned_cols=217  Identities=18%  Similarity=0.106  Sum_probs=157.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC---ccE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---CKG   83 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~   83 (331)
                      .+.|++|||||++.||+++++.|+++|+ +|++.+|+......+.+...    ++..+.+|++|++++++++++   +|+
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~g~iDi   79 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHHHhCCceE
Confidence            4578999999999999999999999999 99999998665444433222    678899999999999988864   799


Q ss_pred             EEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh-----CCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           84 VFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        84 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +||+|+.....    ...+++...+++|+.++..+.+++..     .+..++|++||..+..+.+..             
T Consensus        80 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~-------------  146 (244)
T d1pr9a_          80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNH-------------  146 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB-------------
T ss_pred             EEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccch-------------
Confidence            99999876542    23455678899999999888876532     245689999998654433321             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                             ..|+.+|...+.+.+.++.+   +|+++..+.||.+..+....... ............|      ...+...
T Consensus       147 -------~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------l~R~~~p  212 (244)
T d1pr9a_         147 -------SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS-DPHKAKTMLNRIP------LGKFAEV  212 (244)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSC-SHHHHHHHHTTCT------TCSCBCH
T ss_pred             -------hhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhcc-ChHHHHHHHhcCC------CCCCcCH
Confidence                   26999999999999888755   48999999999998775322111 1122333333222      2346789


Q ss_pred             HHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          232 KDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       232 ~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      +|+|+++.+++...  ...|.. .+.|
T Consensus       213 eevA~~v~fL~S~~a~~itG~~i~vDG  239 (244)
T d1pr9a_         213 EHVVNAILFLLSDRSGMTTGSTLPVEG  239 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCchhCCcCCcEEEECc
Confidence            99999999888543  346644 4443

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=6.3e-21  Score=156.78  Aligned_cols=210  Identities=19%  Similarity=0.160  Sum_probs=152.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||+.++++|+++|+ +|++.+|+........+..     +++++.+|++|+++++++++       
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g   76 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHLG   76 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhcC
Confidence            4568999999999999999999999999 9999999865544443322     67789999999999887764       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      .+|++||+||.....    ...+++...+++|+.++..+.+++...    +...++++||. ...+.++.          
T Consensus        77 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~----------  145 (242)
T d1ulsa_          77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQ----------  145 (242)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTC----------
T ss_pred             CceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCCC----------
Confidence            479999999976542    233456888999999999998876433    44457777764 33322221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+.....   ......+.....+.      .-+
T Consensus       146 ----------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~pl------~R~  206 (242)
T d1ulsa_         146 ----------ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV---PEKVREKAIAATPL------GRA  206 (242)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS---CHHHHHHHHHTCTT------CSC
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC---CHHHHHHHHhcCCC------CCC
Confidence                      37999999999998888755   479999999999988764332   22233333333222      345


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCceEE
Q 020110          229 VPVKDVAKAQVLLFESP--AASGRYL  252 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g~~~  252 (331)
                      ...+|+|.++.+++...  ...|..+
T Consensus       207 ~~pedia~~v~fL~S~~s~~itG~~i  232 (242)
T d1ulsa_         207 GKPLEVAYAALFLLSDESSFITGQVL  232 (242)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             CCHHHHHHHHHHHhchhhCCCCCcEE
Confidence            67899999999988543  3467543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.87  E-value=2.1e-21  Score=161.26  Aligned_cols=218  Identities=14%  Similarity=0.121  Sum_probs=153.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------   79 (331)
                      +.|++|||||++.||++++++|+++|+ +|++.+|++...+...+.....+..+.++.+|+++.++++++++        
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999 99999998655433332211122278899999999998876653        


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      .+|++||+|+.....    ...+++...+++|+.++..+.+++.    +.+..++|++||..+..+.+..          
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~----------  153 (258)
T d1ae1a_          84 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV----------  153 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTC----------
T ss_pred             CcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccc----------
Confidence            379999999876642    2334568889999999998888764    3356789999998664433322          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC---hhHHHHHHHHcCCCCccCcCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN---ASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                ..|+.+|...+.+.+.++++   +|+++.++.||.+..+.......   .....+.++....+      .
T Consensus       154 ----------~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p------l  217 (258)
T d1ae1a_         154 ----------SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP------M  217 (258)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST------T
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCC------C
Confidence                      37999999999999988766   47999999999998875432111   11233333333222      2


Q ss_pred             CCceeHHHHHHHHHHhhcC--CCCCceEE
Q 020110          226 LGAVPVKDVAKAQVLLFES--PAASGRYL  252 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~--~~~~g~~~  252 (331)
                      ..+...+|+|.++++++..  ....|..+
T Consensus       218 gR~~~pediA~~v~fL~S~~s~~itG~~i  246 (258)
T d1ae1a_         218 GRAGKPQEVSALIAFLCFPAASYITGQII  246 (258)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCCcCcEE
Confidence            3378999999999999853  33567543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=8.3e-22  Score=162.19  Aligned_cols=216  Identities=16%  Similarity=0.126  Sum_probs=157.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||++++++|+++|+ +|++.+|+......+.+..+  . ++..+.+|++++++++++++       
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~--~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLG--A-NGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHG--G-GEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC--C-CCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            4578999999999999999999999999 99999998655443332211  1 78899999999988887764       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      ++|++||+|+.....    ...+++...+++|+.++..+.+++.    +.+-.++|++||..+..+.++.          
T Consensus        78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~----------  147 (243)
T d1q7ba_          78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQ----------  147 (243)
T ss_dssp             SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC----------
T ss_pred             CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCC----------
Confidence            489999999876542    2334567889999999999888773    3355789999998665544332          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                                ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+.....   .......+....+      ...+
T Consensus       148 ----------~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~---~~~~~~~~~~~~p------l~R~  208 (243)
T d1q7ba_         148 ----------ANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL---SDDQRAGILAQVP------AGRL  208 (243)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTCT------TSSC
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh---hhhHHHHHHhcCC------CCCC
Confidence                      37999999999999888755   589999999999876643221   1122222222221      2346


Q ss_pred             eeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          229 VPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      ...+|+|.++.+++...  ...|.. .+.|
T Consensus       209 ~~pedvA~~v~fL~S~~s~~itGq~i~vdG  238 (243)
T d1q7ba_         209 GGAQEIANAVAFLASDEAAYITGETLHVNG  238 (243)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            78999999999988643  346643 4444

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=2.9e-21  Score=159.28  Aligned_cols=215  Identities=14%  Similarity=0.089  Sum_probs=152.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      +.|++|||||++.||+++++.|+++|+ +|++.+|++......+..      +..++++|++|+++++++++       +
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   76 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAI------GGAFFQVDLEDERERVRFVEEAAYALGR   76 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHH------TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc------CCeEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999999999999 999999987654433333      56788999999988887764       5


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      +|++||+||.....    ...++++..+++|+.++.++.+++.    +.+-.++|++||..+..+.+..           
T Consensus        77 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~-----------  145 (248)
T d2d1ya1          77 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQEN-----------  145 (248)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTB-----------
T ss_pred             CCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccccc-----------
Confidence            89999999976542    2334457889999999999888774    3355689999998665443332           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCC--CChh-HHHHHHHHcCCCCccCcCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY--LNAS-CAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~  226 (331)
                               ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+.....  .... ......+....      ...
T Consensus       146 ---------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------pl~  210 (248)
T d2d1ya1         146 ---------AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLH------ALR  210 (248)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTS------TTS
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcC------CCC
Confidence                     37999999999988888755   489999999999876531100  0000 00111111111      123


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                      -+...+|+|+++.+++...  ...|. +.+.|
T Consensus       211 R~~~pedia~~v~fL~S~~s~~itG~~i~vDG  242 (248)
T d2d1ya1         211 RLGKPEEVAEAVLFLASEKASFITGAILPVDG  242 (248)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCCCcEEEcCc
Confidence            4678999999999988543  34674 44543

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.87  E-value=2.8e-21  Score=159.91  Aligned_cols=219  Identities=16%  Similarity=0.136  Sum_probs=154.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||+++++.|+++|+ +|++.+|+........+.....+ ++.++.+|++|++++.++++       
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPD-QIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCC-cEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999 99999997655444333222233 79999999999998887764       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCC-EEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVR-RVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~-~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .+|++||+|+.....    ...+++...+++|+.++..+.+++.    +.+.. ++|++||..+..+.+..         
T Consensus        82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~---------  152 (251)
T d1zk4a1          82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSL---------  152 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTC---------
T ss_pred             CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCc---------
Confidence            479999999876542    2234457789999999999988763    33433 78999997654433322         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHH-----HcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAE-----KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~-----~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                 ..|+.+|...+.+.+.++.     .+|+++..+.||.+..+.......  ..........  .    ..
T Consensus       153 -----------~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~~~~~--~----pl  213 (251)
T d1zk4a1         153 -----------GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AEEAMSQRTK--T----PM  213 (251)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT--HHHHHTSTTT--C----TT
T ss_pred             -----------hhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC--HHHHHHHHhC--C----CC
Confidence                       3799999999988887664     347999999999997764322111  1111111111  1    12


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      .-+...+|+|.++++++...  ...|.. .+.|
T Consensus       214 ~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDG  246 (251)
T d1zk4a1         214 GHIGEPNDIAYICVYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECc
Confidence            34678999999999888543  346744 4443

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=2.3e-21  Score=159.37  Aligned_cols=217  Identities=20%  Similarity=0.148  Sum_probs=156.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC---ccE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---CKG   83 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~   83 (331)
                      .+.|++|||||++.||+.++++|.++|+ +|++.+|+..+...+.+...    ++..+.+|++|++++++++++   +|+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~g~iDi   77 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALGGIGPVDL   77 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHHHcCCCeE
Confidence            4678999999999999999999999999 99999998655444433222    678899999999999988874   799


Q ss_pred             EEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh-----CCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           84 VFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        84 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +||+||.....    ...++++..+++|+.++..+.+++..     .+-.++|++||.....+.++.             
T Consensus        78 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-------------  144 (242)
T d1cyda_          78 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNL-------------  144 (242)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB-------------
T ss_pred             EEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCcc-------------
Confidence            99999976542    23344578899999999998886532     234589999997554433221             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  231 (331)
                             ..|+.+|...+.+.+.++.+   +|+++..+-||.+-.+...... ........+....+      ...+...
T Consensus       145 -------~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~p------l~R~~~p  210 (242)
T d1cyda_         145 -------ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERHP------LRKFAEV  210 (242)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHST------TSSCBCH
T ss_pred             -------ccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhc-CCHHHHHHHHhcCC------CCCCcCH
Confidence                   36999999999999888765   4799999999998776421100 01122333332222      2346789


Q ss_pred             HHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          232 KDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       232 ~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                      +|+|+++.+++...  ...|. ..+.|
T Consensus       211 eeva~~v~fL~S~~s~~itG~~i~vDG  237 (242)
T d1cyda_         211 EDVVNSILFLLSDRSASTSGGGILVDA  237 (242)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred             HHHHHHHHHHhCchhcCcCCceEEeCc
Confidence            99999999988543  34664 44544

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.87  E-value=1.1e-20  Score=158.12  Aligned_cols=224  Identities=17%  Similarity=0.187  Sum_probs=157.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||+.++++|+++|+ +|++.+|+....+...+.....+ .+.++.+|++|+++++++++       
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999 99999997655444333222223 68889999999998887774       


Q ss_pred             CccEEEEcccCCCCC------CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 GCKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 ~~d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                      .+|++||+||.....      ...++++..+++|+.++..+.+++.    +.+-.++|++||..+..+....        
T Consensus        82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~--------  153 (268)
T d2bgka1          82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV--------  153 (268)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS--------
T ss_pred             CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc--------
Confidence            579999999965432      1223457789999999998888763    3355689999987554432221        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                 ...|+.+|...+.+.+.++.+   +|+++..+.||.+-++......................    ...
T Consensus       154 -----------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~----~~g  218 (268)
T d2bgka1         154 -----------SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN----LKG  218 (268)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS----SCS
T ss_pred             -----------ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc----cCC
Confidence                       026999999999999888755   48999999999999886543222222222222111111    122


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                      .+...+|+|+++++++...  ...|. ..+.|
T Consensus       219 r~~~pedvA~~v~fL~S~~s~~itGq~i~VDG  250 (268)
T d2bgka1         219 TLLRAEDVADAVAYLAGDESKYVSGLNLVIDG  250 (268)
T ss_dssp             CCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhChhhCCccCceEEECc
Confidence            3678999999999988543  35674 44544

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.86  E-value=1.1e-20  Score=156.10  Aligned_cols=214  Identities=16%  Similarity=0.117  Sum_probs=153.3

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++-||++++++|+++|+ +|++.+|+..+.....+..  .+ ++.++.+|++++++++++++       
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL--GD-AARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT--GG-GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh--CC-ceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999 9999999865544433322  12 78999999999998887764       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      .+|++||+|+.....    ...+++...+++|+.++..+.+++.    +.+-.++|++||..+..+.++.          
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~----------  148 (254)
T d1hdca_          79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT----------  148 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC----------
T ss_pred             CccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccch----------
Confidence            589999999976542    2334457889999999999888763    3355799999998665544332          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCc-cCcCCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLG  227 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  227 (331)
                                ..|+.+|...+.+.+.++.+   +|+++..+.||.+..+..           .+........ .......
T Consensus       149 ----------~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~-----------~~~~~~~~~~~~~~~pl~  207 (254)
T d1hdca_         149 ----------SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT-----------AETGIRQGEGNYPNTPMG  207 (254)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----------HHHTCCCSTTSCTTSTTS
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccc-----------hhcCHHHHHHHHhCCCCC
Confidence                      37999999999999888755   479999999998865421           1111100000 1111111


Q ss_pred             -c-eeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          228 -A-VPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       228 -~-v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                       + ...+|+|.++++++...  ...|. +.+.|
T Consensus       208 R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDG  240 (254)
T d1hdca_         208 RVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDG  240 (254)
T ss_dssp             SCB-CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCHHHHHHHHHHHhchhhCCCCCceEEeCC
Confidence             2 35799999999988543  34674 45544

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.86  E-value=4.6e-21  Score=159.52  Aligned_cols=222  Identities=20%  Similarity=0.161  Sum_probs=156.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||+++++.|.++|+ +|++.+|+........+.....+.++..+.+|++|+++++++++       
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999 99999998655443332222222278999999999988887764       


Q ss_pred             CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .+|++||+||....     +...+++...+++|+.++..+.+++..    .+-.++|++||..+..+.+..         
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~---------  152 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM---------  152 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB---------
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcch---------
Confidence            47999999996532     223445678899999999998887632    355689999998665544332         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCC-------------CCCChhHHHHHHHH
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQ-------------PYLNASCAVLQQLL  214 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~-------------~~~~~~~~~~~~~~  214 (331)
                                 ..|+.+|...+.+.+.++.+   +|+++..+.||.|-.+...             ............+.
T Consensus       153 -----------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (260)
T d1zema1         153 -----------AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMI  221 (260)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHH
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHH
Confidence                       27999999999999888755   4799999999999776311             00011112222222


Q ss_pred             cCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       215 ~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                      ...|      ..-+..++|+|.++++++...  ...|. ..+.|
T Consensus       222 ~~~P------l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  259 (260)
T d1zema1         222 GSVP------MRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  259 (260)
T ss_dssp             HTST------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             hcCC------CCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCC
Confidence            2222      233567899999999988643  34563 34433

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.1e-21  Score=157.91  Aligned_cols=218  Identities=18%  Similarity=0.144  Sum_probs=156.1

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||+++++.|+++|+ +|++.+|+......+.+...    ++.++.+|++|+++++++++       
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~----~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRFG   78 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcC----CCeEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999999 99999998665544443322    78899999999998887764       


Q ss_pred             CccEEEEcccCCCCC-----CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 ~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                      .+|++||+||.....     ...++++..+++|+.++.++.+++...   +-.++|++||..+..+.+..          
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~----------  148 (250)
T d1ydea1          79 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA----------  148 (250)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC----------
T ss_pred             CCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCc----------
Confidence            479999999965431     223446788999999999988876433   22689999998665544332          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCC---CCChhHHHHHHHHcCCCCccCcCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                ..|+.+|...+.+.+.++.+   +|+++..+.||.|-.+....   ........+.+.....|      .
T Consensus       149 ----------~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p------l  212 (250)
T d1ydea1         149 ----------VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP------L  212 (250)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST------T
T ss_pred             ----------chhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCC------C
Confidence                      37999999999999888765   48999999999987653110   00111222333333222      2


Q ss_pred             CCceeHHHHHHHHHHhhcC-CCCCce-EEEec
Q 020110          226 LGAVPVKDVAKAQVLLFES-PAASGR-YLCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~-~~~~g~-~~~~~  255 (331)
                      .-+...+|+|.++++++.. ...+|. +.+.|
T Consensus       213 ~R~g~p~eva~~v~fL~Sda~~itG~~i~vDG  244 (250)
T d1ydea1         213 GRMGQPAEVGAAAVFLASEANFCTGIELLVTG  244 (250)
T ss_dssp             SSCBCHHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             CCCCCHHHHHHHHHHHhCccCCCcCCeEEECC
Confidence            3467899999999988743 224564 44443

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.86  E-value=5.9e-21  Score=158.67  Aligned_cols=221  Identities=15%  Similarity=0.116  Sum_probs=154.3

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      +.+.|++|||||++.||++++++|.++|+ +|++..|+..+ ...+.+ +..... ++..+.+|++|+++++++++    
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            56788999999999999999999999999 99999987643 222211 111122 78899999999998887764    


Q ss_pred             ---CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCC-CEEEEeCccceeccCCCCCCcccc
Q 020110           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGV-RRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                         ++|++||+||.....    ...+++...+++|+.++..+.+++.    +.+. ..+|++||.....+.+..      
T Consensus        82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~------  155 (261)
T d1geea_          82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF------  155 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC------
T ss_pred             HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccc------
Confidence               579999999976542    2344568889999999988887653    3343 358899997654433322      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                    ..|+.+|...+.+.+.++.+   +|+++.++.||.+..+..... .........+....+      
T Consensus       156 --------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------  214 (261)
T d1geea_         156 --------------VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK-FADPEQRADVESMIP------  214 (261)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH-HHSHHHHHHHHTTCT------
T ss_pred             --------------cccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhh-cCCHHHHHHHHhcCC------
Confidence                          26999999999998888755   489999999999987643210 001112222222221      


Q ss_pred             CCCceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          225 WLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                      ..-+...+|+|+++++++...  ...|. +.+.|
T Consensus       215 l~R~~~pediA~~v~fL~S~~s~~itG~~i~vDG  248 (261)
T d1geea_         215 MGYIGEPEEIAAVAAWLASSEASYVTGITLFADG  248 (261)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            233668899999999988543  34674 44443

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.86  E-value=3e-21  Score=160.34  Aligned_cols=216  Identities=14%  Similarity=0.097  Sum_probs=139.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||+.+++.|+++|+ +|++.+|+........+.....+.++..+.+|++++++++++++       
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   84 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999 99999998655443322111111278999999999988776653       


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       .+|++||+||.....    ...+++...+++|+.++..+.+++.    +.+-.++|++||..+..+.+..         
T Consensus        85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~---------  155 (259)
T d1xq1a_          85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG---------  155 (259)
T ss_dssp             TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------C---------
T ss_pred             CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccc---------
Confidence             379999999976542    2334568889999999999888764    3356799999997664443322         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                                 ..|+.+|...+.+.+.++.+   +|+++.++-||.+-.+.......  ......+....      ...-
T Consensus       156 -----------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~--~~~~~~~~~~~------pl~R  216 (259)
T d1xq1a_         156 -----------SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD--DEFKKVVISRK------PLGR  216 (259)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------
T ss_pred             -----------ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhch--HHHHHHHHhCC------CCCC
Confidence                       37999999999998888755   48999999999998775322110  01111111111      1223


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCceE
Q 020110          228 AVPVKDVAKAQVLLFESP--AASGRY  251 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g~~  251 (331)
                      +...+|+|.++++++...  ..+|..
T Consensus       217 ~~~pedvA~~v~fL~S~~s~~iTG~~  242 (259)
T d1xq1a_         217 FGEPEEVSSLVAFLCMPAASYITGQT  242 (259)
T ss_dssp             -CCGGGGHHHHHHHTSGGGTTCCSCE
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCcE
Confidence            567899999999888533  346644

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.86  E-value=1.1e-20  Score=155.78  Aligned_cols=217  Identities=16%  Similarity=0.140  Sum_probs=148.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch--hhcCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH--LFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .+.|.+|||||++.||+.+++.|+++|+ +|++.+|++.+...  ....   +. ++.++.+|++|+++++++++     
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~---g~-~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNL---GR-RVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHT---TC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHc---CC-cEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999 99999987643211  1122   22 78999999999998887764     


Q ss_pred             --CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 --~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                        ++|++||+||.....    ...++++..+++|+.++..+.+++.    +.+-.++|++||..+..+.+..        
T Consensus        78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~--------  149 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY--------  149 (247)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSC--------
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCccc--------
Confidence              589999999976542    2335568899999999999888763    3355789999998664443332        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                  ..|+.+|...+.+.+.++.+   +|+++..+.||.+..+.......  ...... .....    ....
T Consensus       150 ------------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~-~~~~~----~~l~  210 (247)
T d2ew8a1         150 ------------THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL--SAMFDV-LPNML----QAIP  210 (247)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTT----SSSC
T ss_pred             ------------ccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc--chhHHH-HHHHh----ccCC
Confidence                        27999999999888888754   47999999999998775432110  000000 00000    0122


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                      -+...+|+|+++++++...  ...|. ..+.|
T Consensus       211 r~~~pedvA~~v~fL~S~~s~~itG~~i~vDG  242 (247)
T d2ew8a1         211 RLQVPLDLTGAAAFLASDDASFITGQTLAVDG  242 (247)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            3567899999999888643  34664 44444

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.85  E-value=6.1e-21  Score=158.59  Aligned_cols=222  Identities=14%  Similarity=0.078  Sum_probs=156.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||+++++.|+++|+ +|++.+|+........+.....+.++.++.+|++++++++++++       
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   84 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999 99999997655433322111112278899999999988776652       


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       .+|++||+||.....    ...+++...+++|+.++..+.+++.    +.+-.++|++||..+..+.++.         
T Consensus        85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~---------  155 (259)
T d2ae2a_          85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE---------  155 (259)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC---------
T ss_pred             CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccc---------
Confidence             379999999976542    2334567899999999988888663    3455689999997664433322         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCCccCcCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                 ..|+.+|...+.+.+.++.+   +++++..+.||.+-.+......  ......+.++....+.      
T Consensus       156 -----------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl------  218 (259)
T d2ae2a_         156 -----------AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL------  218 (259)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT------
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC------
Confidence                       37999999999999988865   4799999999999776421100  1112233344433322      


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      .-+...+|+|.++++++...  ..+|.. .+.|
T Consensus       219 ~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  251 (259)
T d2ae2a_         219 RRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG  251 (259)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECC
Confidence            23677899999999888643  346644 4444

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.85  E-value=1.9e-20  Score=155.41  Aligned_cols=220  Identities=16%  Similarity=0.120  Sum_probs=154.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||+++++.|+++|+ +|++.+|+........+..  +. ++.++.+|++++++++++++       
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~--~~-~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEI--GP-AACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHH--CT-TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh--CC-ceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999 9999999765544333221  12 78899999999999887764       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh-----CCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      .+|++||+||.....    ...++++..+++|+.++..+.+++..     .+..++|++||..+..+.+..         
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~---------  149 (256)
T d1k2wa_          79 SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALV---------  149 (256)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC---------
T ss_pred             CccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccc---------
Confidence            579999999976542    23344688899999999998886432     234689999998665443332         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCCh--------hHHHHHHHHcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGSKD  219 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~  219 (331)
                                 ..|+.+|...+.+.+.++.+   +||++..+.||.+-.+........        .......+....  
T Consensus       150 -----------~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  216 (256)
T d1k2wa_         150 -----------GVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAV--  216 (256)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHS--
T ss_pred             -----------cchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcC--
Confidence                       37999999999999888755   489999999999887752110000        000011111111  


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~~  256 (331)
                          ...-+...+|+|.++++++...  ...|. ..+.|+
T Consensus       217 ----PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG  252 (256)
T d1k2wa_         217 ----PFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGG  252 (256)
T ss_dssp             ----TTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCCcCHHHHHHHHHHHhCchhCCccCceEEECcc
Confidence                1234678999999999887543  34664 455543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.85  E-value=8.9e-21  Score=156.74  Aligned_cols=221  Identities=17%  Similarity=0.139  Sum_probs=154.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .+.|++|||||++.||+.+++.|+++|+ +|++.+|+........ ++....+.++.++.+|++++++++++++      
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3568999999999999999999999999 9999999765433222 1111111278899999999988887764      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceec-cCCCCCCccccCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIV-PNPGWKGKVFDET  149 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~-~~~~~~~~~~~E~  149 (331)
                       ++|++||+||.....    ...++++..+++|+.++..+.+++.    +.+-.++|++||..+.. +.++.        
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~--------  153 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNI--------  153 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSC--------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccc--------
Confidence             589999999975542    2344568889999999999888763    33556899999864322 21111        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                  ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+...... ........+....+.      .
T Consensus       154 ------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~pl------~  214 (251)
T d1vl8a_         154 ------------SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF-SDPEKLDYMLKRIPL------G  214 (251)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH-TCHHHHHHHHHTCTT------S
T ss_pred             ------------cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc-CCHHHHHHHHhcCCC------C
Confidence                        26999999999999888755   4899999999999877542110 012233333333222      2


Q ss_pred             CceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          227 GAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      .+..++|+|+++++++...  ...|.. .+.|
T Consensus       215 R~~~pedvA~~v~fL~S~~a~~itG~~i~vDG  246 (251)
T d1vl8a_         215 RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG  246 (251)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCHHHHHHHHHHHhCchhCCCcCcEEEeCc
Confidence            3567899999999888543  346644 4443

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.85  E-value=6.6e-21  Score=158.68  Aligned_cols=227  Identities=17%  Similarity=0.144  Sum_probs=150.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.|++|||||++.||++++++|+++|+ +|++..|+... .+.+. ++....+.++.++.+|++|+++++++++      
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999 99999887532 22211 1111112278899999999999888774      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       ++|++||+||.....    ...+++...+++|+.++..+.+++    ++.+-.++|++||..+..+.++.         
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~---------  152 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK---------  152 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC---------
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCc---------
Confidence             479999999976542    234456888999999998887765    33355689999998665544332         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhH--HHHHHHHcCCC-CccCcC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASC--AVLQQLLQGSK-DTQEYH  224 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~  224 (331)
                                 ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+..........  ........... ......
T Consensus       153 -----------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  221 (260)
T d1x1ta1         153 -----------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQP  221 (260)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCT
T ss_pred             -----------chhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCC
Confidence                       37999999999999888765   47999999999998775322110000  00000000000 000001


Q ss_pred             CCCceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          225 WLGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      ..-+...+|+|.++++++...  ...|.. .+.|
T Consensus       222 l~R~g~pediA~~v~fL~S~~a~~itG~~i~vDG  255 (260)
T d1x1ta1         222 SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECc
Confidence            234678999999999988643  346644 4443

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.85  E-value=2.5e-20  Score=154.64  Aligned_cols=222  Identities=17%  Similarity=0.112  Sum_probs=155.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--CCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--GAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .+.|++|||||++.||+.+++.|+++|+ +|++.+|+...........  ...+.++.++.+|++|+++++++++     
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999 9999999765433222110  0112278899999999999887764     


Q ss_pred             --CccEEEEcccCCCC-----CCCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 --GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 --~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                        .+|++||+||....     +...+++...+++|+.++..+.+++.    +.+-.++|++||..+..+.++.       
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~-------  153 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQ-------  153 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSB-------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCc-------
Confidence              58999999996532     12334568899999999999988763    3356789999998665543332       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCC-----CChhHHHHHHHHcCCCCc
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY-----LNASCAVLQQLLQGSKDT  220 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~  220 (331)
                                   ..|+.+|...+.+.+.++.+   +||++..+.||.+..+.....     ..........+....+  
T Consensus       154 -------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p--  218 (258)
T d1iy8a_         154 -------------SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP--  218 (258)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT--
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCC--
Confidence                         37999999999998888755   479999999999976632100     0001122222222221  


Q ss_pred             cCcCCCCceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       221 ~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                          ..-+...+|+|.++++++...  ...|.. .+.|
T Consensus       219 ----l~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDG  252 (258)
T d1iy8a_         219 ----SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG  252 (258)
T ss_dssp             ----TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             ----CCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCc
Confidence                234678999999999888643  346643 4443

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.85  E-value=1.2e-20  Score=156.83  Aligned_cols=219  Identities=16%  Similarity=0.074  Sum_probs=155.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-------C
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   80 (331)
                      .|.+|||||++.||++++++|+++|+ +|++.+|+........+ +...+. ++.++.+|++|+++++++++       .
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~-~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            36789999999999999999999999 99999997654433322 111122 78999999999998887764       4


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC------CCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF------GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                      +|++||+||.....    ...++++..+++|+.++.++.+++...      +..++|++||..+..+.++.         
T Consensus        80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~---------  150 (257)
T d2rhca1          80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA---------  150 (257)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTC---------
T ss_pred             CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccc---------
Confidence            79999999976542    234456888999999999999987542      44579999998665444332         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCC--------CChhHHHHHHHHcCCCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGSKD  219 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~  219 (331)
                                 ..|+.+|...+.+.+.++.+.   |+++..+.||.+-.+.....        .........++....| 
T Consensus       151 -----------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~P-  218 (257)
T d2rhca1         151 -----------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP-  218 (257)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTST-
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCC-
Confidence                       379999999999999988664   79999999999866531100        0001122223222221 


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcC--CCCCceE-EEec
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFES--PAASGRY-LCTN  255 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~--~~~~g~~-~~~~  255 (331)
                           ..-+...+|+|+++++++..  ...+|.. .+.|
T Consensus       219 -----lgR~~~pedia~~v~fL~S~~s~~itG~~i~vDG  252 (257)
T d2rhca1         219 -----IGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCG  252 (257)
T ss_dssp             -----TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             -----CCCCcCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence                 23467899999999998854  3356644 4444

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.84  E-value=6.2e-21  Score=157.00  Aligned_cols=213  Identities=17%  Similarity=0.121  Sum_probs=151.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEec-CCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Cc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   81 (331)
                      +-||||||++.||++++++|+++|+ +|++..+ +......+.+.....+.++.++.+|++|+++++++++       ++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999 9987654 3333332222111111278899999999998887764       57


Q ss_pred             cEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        82 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      |++||+|+.....    ...++++..+++|+.++..+.+++.    +.+-.++|++||..+..+.++.            
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~------------  148 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ------------  148 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC------------
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCC------------
Confidence            9999999876542    2345568899999999999888763    3355789999998776554442            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                              ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+.....   .......+....+      ..-+..
T Consensus       149 --------~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~p------l~R~~~  211 (244)
T d1edoa_         149 --------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTIP------LGRTGQ  211 (244)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSCT------TCSCBC
T ss_pred             --------HHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh---hHHHHHHHHhcCC------CCCCcC
Confidence                    37999999999999888765   489999999999976643221   1222333333222      234678


Q ss_pred             HHHHHHHHHHhhcCCC---CCceEE
Q 020110          231 VKDVAKAQVLLFESPA---ASGRYL  252 (331)
Q Consensus       231 v~D~a~a~~~~l~~~~---~~g~~~  252 (331)
                      .+|+|.++.+++.++.   ..|..+
T Consensus       212 p~dvA~~v~fLa~S~~a~~itG~~i  236 (244)
T d1edoa_         212 PENVAGLVEFLALSPAASYITGQAF  236 (244)
T ss_dssp             HHHHHHHHHHHHHCSGGGGCCSCEE
T ss_pred             HHHHHHHHHHHHCCchhcCCcCCeE
Confidence            8999999998864433   456443

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.84  E-value=2.1e-20  Score=155.12  Aligned_cols=219  Identities=17%  Similarity=0.142  Sum_probs=149.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------Ccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   82 (331)
                      |.+|||||++.||++++++|+++|+ +|++.+|++.....+.+.....+.++.++.+|++|++++.++++       .+|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            3469999999999999999999999 99999998655433322111112278899999999998887764       589


Q ss_pred             EEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----C-CCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           83 GVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----F-GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        83 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      ++||+||.....    ...++++..+++|+.++.++.+++..    . +..++|++||..+..+.+..            
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~------------  148 (255)
T d1gega_          81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPEL------------  148 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB------------
T ss_pred             EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCccc------------
Confidence            999999976542    23344678899999999998887532    2 34569999987654433332            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCC--------ChhHHHHHHHHcCCCCccC
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--------NASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~  222 (331)
                              ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+......        .........+....     
T Consensus       149 --------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  215 (255)
T d1gega_         149 --------AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI-----  215 (255)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC-----
T ss_pred             --------ccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcC-----
Confidence                    26999999999998888755   4899999999988665311000        00000111111111     


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                       ...-+...+|+|+++++++...  ...|. ..+.|
T Consensus       216 -pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDG  250 (255)
T d1gega_         216 -TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDG  250 (255)
T ss_dssp             -TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             -CCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecC
Confidence             1234678999999999888543  34664 44544

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.84  E-value=1.7e-20  Score=153.98  Aligned_cols=197  Identities=15%  Similarity=0.078  Sum_probs=146.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCE-------EEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTS-------INATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      -||||||++.||++++++|.++|+ +       |+..+|+......+.......+.++.++.+|++|+++++++++    
T Consensus         3 VvlITGas~GIG~aia~~la~~G~-~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAAR-HHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTT-TCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCc-cccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            379999999999999999999998 5       8888887655444332211122278899999999998887764    


Q ss_pred             ---CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                         .+|++||+|+.....    ...++++..+++|+.++..+.+++.    +.+-.++|++||..+..+.++.       
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~-------  154 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHS-------  154 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-------
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCC-------
Confidence               479999999976542    2334568889999999999888764    3355689999998665544332       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                   ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+.......                  ...
T Consensus       155 -------------~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~------------------~~~  203 (240)
T d2bd0a1         155 -------------SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD------------------EMQ  203 (240)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS------------------TTG
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH------------------hhH
Confidence                         37999999999888887655   58999999999998775322100                  011


Q ss_pred             CCceeHHHHHHHHHHhhcCCC
Q 020110          226 LGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~  246 (331)
                      ..+...+|+|+++++++..+.
T Consensus       204 ~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         204 ALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             GGSBCHHHHHHHHHHHHTSCT
T ss_pred             hcCCCHHHHHHHHHHHHcCCc
Confidence            234668999999999987654

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=2.3e-20  Score=155.24  Aligned_cols=218  Identities=13%  Similarity=0.101  Sum_probs=148.6

Q ss_pred             ccCCCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            6 EKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      +.+.|++|||||+|  -||++++++|+++|+ +|++..|+........+.....+ +..++.+|++|+++++++++    
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccC-cccccccccCCHHHHHHHHHHHHH
Confidence            35678999999998  799999999999999 99888887544333332222222 57789999999988887764    


Q ss_pred             ---CccEEEEcccCCCC--------CCCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccc
Q 020110           80 ---GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 ---~~d~vih~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                         ++|++||+|+....        +...+++...+++|+.++..+.+++...  +-.++|++||..+..+.++.     
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~-----  157 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY-----  157 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC-----
T ss_pred             hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCc-----
Confidence               47999999986432        1122334567899999999998887654  22479999997664433322     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                                     ..|+.+|...+.+.+.++.+   +|+++..+.|+.+..+...... .......++....|.    
T Consensus       158 ---------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~-~~~~~~~~~~~~~pl----  217 (256)
T d1ulua_         158 ---------------NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAPL----  217 (256)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------CHHHHHHHHHHSTT----
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchh-hhHHHHHHHHhcCCC----
Confidence                           37999999999999888765   4899999999999877543221 112233333332222    


Q ss_pred             CCCCceeHHHHHHHHHHhhcCC--CCCceEE
Q 020110          224 HWLGAVPVKDVAKAQVLLFESP--AASGRYL  252 (331)
Q Consensus       224 ~~~~~v~v~D~a~a~~~~l~~~--~~~g~~~  252 (331)
                        .-+...+|+|+++++++...  ...|..+
T Consensus       218 --~R~~~pedvA~~v~fL~S~~s~~itG~~i  246 (256)
T d1ulua_         218 --RRNITQEEVGNLGLFLLSPLASGITGEVV  246 (256)
T ss_dssp             --SSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             --CCCcCHHHHHHHHHHHhCchhCCccCCeE
Confidence              33677899999999988643  3467443

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.83  E-value=5.4e-20  Score=151.11  Aligned_cols=215  Identities=21%  Similarity=0.154  Sum_probs=152.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||..+++.|+++|+ +|++..|+..+.....+..+  + ++.++++|++++++++++++       
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALE--A-EAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCC--S-SEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcC--C-ceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999 99999998765444333322  2 78899999999998877664       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      ++|++||+|+.....    ...+++...+++|+.++..+.+++...  +-+.++++||. +....               
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~-a~~~~---------------  142 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV-AGLGA---------------  142 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC-TTCCH---------------
T ss_pred             CccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc-ccccc---------------
Confidence            589999999876542    223445788999999999999987544  33445555554 21111               


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCcee
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  230 (331)
                      |..     ..|+.+|...+.+.+.++++.   |+++.++.||.+-.+....   .......+.....+.      .-+..
T Consensus       143 ~~~-----~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~---~~~~~~~~~~~~~p~------~r~~~  208 (241)
T d2a4ka1         143 FGL-----AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG---LPPWAWEQEVGASPL------GRAGR  208 (241)
T ss_dssp             HHH-----HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT---SCHHHHHHHHHTSTT------CSCBC
T ss_pred             cCc-----cccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHh---hhHhHHHHHHhCCCC------CCCcC
Confidence            111     269999999999999888664   6999999999997764322   122333344333222      34668


Q ss_pred             HHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          231 VKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       231 v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      ++|+|++++.++...  ...|.. .+.|
T Consensus       209 p~dva~~v~fL~S~~s~~itG~~i~vDG  236 (241)
T d2a4ka1         209 PEEVAQAALFLLSEESAYITGQALYVDG  236 (241)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhcchhCCCcCceEEeCC
Confidence            999999999998643  356744 4433

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.2e-20  Score=153.41  Aligned_cols=200  Identities=14%  Similarity=0.038  Sum_probs=147.6

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +..+|.+|||||++-||++++++|+++|+ +|++.+|+..+...+.......+.++..+.+|++|++++.++++      
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999 99999998755443332211122278999999999998887664      


Q ss_pred             -CccEEEEcccCCCCCCCC----CchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 -GCKGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                       .+|++||+||........    +.++..+++|+.++.++.+++    ++.+-.++|++||..+..+.++          
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~----------  152 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF----------  152 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH----------
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCC----------
Confidence             479999999987653322    234788999999999888865    3446678999999865443222          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH------cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK------HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~------~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                           .     ..|+.||...+.+.+.++.+      .|++++.+.||.|-.+.....   .    .            .
T Consensus       153 -----~-----~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~---~----~------------~  203 (244)
T d1yb1a_         153 -----L-----LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---S----T------------S  203 (244)
T ss_dssp             -----H-----HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---H----H------------H
T ss_pred             -----c-----HHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc---C----c------------c
Confidence                 1     36999999999998888754      479999999998876643221   0    0            0


Q ss_pred             CCCceeHHHHHHHHHHhhcCC
Q 020110          225 WLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      ....+..+|+|+.+...+...
T Consensus       204 ~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         204 LGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HCCCCCHHHHHHHHHHHHHTT
T ss_pred             ccCCCCHHHHHHHHHHHHhcC
Confidence            123456899999998877654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.83  E-value=1.9e-19  Score=147.30  Aligned_cols=210  Identities=14%  Similarity=0.059  Sum_probs=147.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc-hHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~vih   86 (331)
                      +.|++|||||++.||+++++.|+++|+ +|++.+|+...   +++.      +.+++.+|+++. +.+.+.+.++|++||
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~---l~~~------~~~~~~~Dv~~~~~~~~~~~g~iD~lVn   72 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRS------GHRYVVCDLRKDLDLLFEKVKEVDILVL   72 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHT------CSEEEECCTTTCHHHHHHHSCCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHH---HHhc------CCcEEEcchHHHHHHHHHHhCCCcEEEe
Confidence            468999999999999999999999999 99999987543   2222      556788999874 345555667999999


Q ss_pred             cccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhh
Q 020110           87 VASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (331)
Q Consensus        87 ~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (331)
                      +||.....    ...+++...+++|+.++..+.+++.    +.+..++|++||.....+.+..                 
T Consensus        73 nAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~-----------------  135 (234)
T d1o5ia_          73 NAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENL-----------------  135 (234)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB-----------------
T ss_pred             cccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccccc-----------------
Confidence            99865442    2334457788999999888887663    3455689999987543322221                 


Q ss_pred             ccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHH
Q 020110          159 SRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA  235 (331)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a  235 (331)
                         ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+.......  ......+....+      ...+...+|+|
T Consensus       136 ---~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~~p------l~R~~~pediA  204 (234)
T d1o5ia_         136 ---YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS--EEKKKQVESQIP------MRRMAKPEEIA  204 (234)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC--HHHHHHHHTTST------TSSCBCHHHHH
T ss_pred             ---ccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcC--HHHHHHHHhcCC------CCCCcCHHHHH
Confidence               26999999999888887755   48999999999997765321111  112222222221      23467899999


Q ss_pred             HHHHHhhcCC--CCCceE-EEec
Q 020110          236 KAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       236 ~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      .++.+++...  ...|.. .+.|
T Consensus       205 ~~v~fL~S~~s~~itG~~i~vDG  227 (234)
T d1o5ia_         205 SVVAFLCSEKASYLTGQTIVVDG  227 (234)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhChhhcCCcCcEEEECc
Confidence            9999888543  346744 4443

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.7e-19  Score=148.56  Aligned_cols=220  Identities=15%  Similarity=0.086  Sum_probs=155.6

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh---cC
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV---EG   80 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~   80 (331)
                      |.+.+.|++|||||++-||+++++.|+++|+ +|++.+|++...+.+.+..     +++...+|+.+.+.++...   .+
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~   74 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYP-----GIQTRVLDVTKKKQIDQFANEVER   74 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGST-----TEEEEECCTTCHHHHHHHHHHCSC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcc-----CCceeeeecccccccccccccccc
Confidence            4446678999999999999999999999999 9999999875554444322     6888889998876665544   46


Q ss_pred             ccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCcccee-ccCCCCCCccccCCCC
Q 020110           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAI-VPNPGWKGKVFDETSW  151 (331)
Q Consensus        81 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~-~~~~~~~~~~~~E~~~  151 (331)
                      +|++||+||.....    ...+.+...+++|+.++..+.+++..    .+..++|++||..+. .+.+.           
T Consensus        75 id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~-----------  143 (245)
T d2ag5a1          75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVN-----------  143 (245)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTT-----------
T ss_pred             ceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccc-----------
Confidence            89999999977652    23345688899999999999887643    245689999986431 11111           


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCC---CChhHHHHHHHHcCCCCccCcCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                               ...|+.+|...+.+.+.++.+   +|+++..+.||.+-+|.....   ..........+....+      .
T Consensus       144 ---------~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p------l  208 (245)
T d2ag5a1         144 ---------RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK------T  208 (245)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT------T
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCC------C
Confidence                     137999999999999988865   489999999999977642110   0011122223333222      2


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      ..+...+|+|+++.+++...  ...|.. .+.|
T Consensus       209 ~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDG  241 (245)
T d2ag5a1         209 GRFATAEEIAMLCVYLASDESAYVTGNPVIIDG  241 (245)
T ss_dssp             SSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCCcCceEEeCC
Confidence            34788999999999998643  346754 4433

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.82  E-value=4.3e-20  Score=152.74  Aligned_cols=221  Identities=17%  Similarity=0.138  Sum_probs=150.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||+++++.|+++|+ +|++.+|+......+.+...  . +..++.+|++++++++++++       
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~--~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g   79 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELG--E-RSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHC--T-TEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhC--C-CeEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4568999999999999999999999999 99999987654433332211  1 78889999999988887764       


Q ss_pred             CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      .+|++||+||.....    ...++++..+++|+.++..+.+++...   +-.++|++||..+..+.+..           
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~-----------  148 (253)
T d1hxha_          80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQY-----------  148 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTB-----------
T ss_pred             CCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcccc-----------
Confidence            479999999976542    233445788999999998888876432   23689999998664433321           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH-----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                               ..|+.+|...+.+.+.++.+     +++++..+-||.+..+........  .............  ...-.
T Consensus       149 ---------~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~~~--~~~gr  215 (253)
T d1hxha_         149 ---------AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK--GVSKEMVLHDPKL--NRAGR  215 (253)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT--TCCHHHHBCBTTT--BTTCC
T ss_pred             ---------ccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcc--hhhHHHHHhCccc--cccCC
Confidence                     26999999998888776643     359999999999876531100000  0000111111000  01224


Q ss_pred             ceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          228 AVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                      +...+|+|+++++++...  ...|. ..+.|
T Consensus       216 ~~~pedvA~~v~fL~S~~s~~itG~~i~VDG  246 (253)
T d1hxha_         216 AYMPERIAQLVLFLASDESSVMSGSELHADN  246 (253)
T ss_dssp             EECHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             CCCHHHHHHHHHHHhChhhCCCcCcEEEECc
Confidence            678999999999888643  34664 44544

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.1e-19  Score=151.96  Aligned_cols=221  Identities=13%  Similarity=0.051  Sum_probs=151.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh----c-CCCCCCCcEEEEEccCCCchHHHHHhc--
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF----A-LPGAGDANLRVFEADVLDSGAVSRAVE--   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~----~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   79 (331)
                      .+.|++|||||++.||++++++|+++|+ +|++.+|+........    . .....+.++..+.+|++|+++++++++  
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999 9999999765432221    1 112223379999999999998887764  


Q ss_pred             -----CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC----CCCEEEEeCccceeccCCCCCCccc
Q 020110           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 -----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                           .+|++||+|+.....    ...+++...+++|+.++..+.+++...    +..++|++||. ...+.+..     
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~~~~~~-----  162 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGFPLA-----  162 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCCTTC-----
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-cccccccc-----
Confidence                 579999999865542    233456788999999999998876432    44568887664 32222211     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChh-HHHHHHHHcCCCCccC
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS-CAVLQQLLQGSKDTQE  222 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~  222 (331)
                                     ..|+.+|...+.+.+.++.+   +|+++..+.||.|..+......... ..........    . 
T Consensus       163 ---------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~----~-  222 (297)
T d1yxma1         163 ---------------VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK----I-  222 (297)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG----S-
T ss_pred             ---------------ccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhc----C-
Confidence                           36999999999999888866   4799999999999887532211111 0001111111    0 


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                       ...-+...+|+|.++++++...  ..+|.. .+.|
T Consensus       223 -plgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDG  257 (297)
T d1yxma1         223 -PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDG  257 (297)
T ss_dssp             -TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CCCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCc
Confidence             1233667899999999998543  346754 4444

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.82  E-value=1.7e-19  Score=149.14  Aligned_cols=215  Identities=16%  Similarity=0.119  Sum_probs=151.0

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC-CCCCcEEEEEccCC-CchHHHHHhc-----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVL-DSGAVSRAVE-----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~-~~~~~~~~~~-----   79 (331)
                      .+.|+||||||++.||..++++|+++|. +|+++.|+........++.. ..+.++.++.+|++ +.++++++++     
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999 88888887655433332111 11227889999998 4445655543     


Q ss_pred             --CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-------CCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 --GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-------GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                        ++|++||+||...    .+.++..+++|+.++.++.+++...       ...++|++||..+..+.++.         
T Consensus        82 ~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~---------  148 (254)
T d1sbya1          82 LKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV---------  148 (254)
T ss_dssp             HSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS---------
T ss_pred             cCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCC---------
Confidence              5899999999754    4567899999999999988876432       23579999998665544432         


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC--hhHHHHHHHHcCCCCccCcCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                 ..|+.+|.....+.+.++.+   +++++..+.||.|..+.......  .....+.+..         ..
T Consensus       149 -----------~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~  208 (254)
T d1sbya1         149 -----------PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL---------LS  208 (254)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH---------TT
T ss_pred             -----------HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc---------cc
Confidence                       26999999999888887754   48999999999998763111000  0000011111         12


Q ss_pred             CCceeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESPAASG-RYLCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~~~g-~~~~~~~  256 (331)
                      +.....+++|++++.++.... .| ++.+.++
T Consensus       209 ~~~~~~e~va~~~~~~~~~~~-tG~vi~vdgG  239 (254)
T d1sbya1         209 HPTQTSEQCGQNFVKAIEANK-NGAIWKLDLG  239 (254)
T ss_dssp             SCCEEHHHHHHHHHHHHHHCC-TTCEEEEETT
T ss_pred             CCCCCHHHHHHHHHHhhhCCC-CCCEEEECCC
Confidence            345689999999998887664 56 5666654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.5e-19  Score=149.87  Aligned_cols=215  Identities=15%  Similarity=0.136  Sum_probs=148.2

Q ss_pred             cccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCC-CCCcEEEEEccCCCchHHHHHhc-
Q 020110            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         3 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      -|...+.|.+|||||++.||.++++.|+++|+ +|++..|+......+.+ +... .+.++.++.+|+++++++.++++ 
T Consensus         4 ~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~   82 (257)
T d1xg5a_           4 GMERWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA   82 (257)
T ss_dssp             TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH
Confidence            46667789999999999999999999999999 99999998655443322 1111 11278899999999998887764 


Q ss_pred             ------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHH----HhCC--CCEEEEeCccceeccCCCCCC
Q 020110           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFG--VRRVVVTSSISAIVPNPGWKG  143 (331)
Q Consensus        80 ------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~--~~~~v~~SS~~~~~~~~~~~~  143 (331)
                            ++|++||+|+.....    ...+.+...+++|+.++..+.+++    ++.+  -.++|++||.++....+..  
T Consensus        83 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~--  160 (257)
T d1xg5a_          83 IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS--  160 (257)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG--
T ss_pred             HHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCc--
Confidence                  579999999976542    233445788999999888877765    3333  4689999997553222110  


Q ss_pred             ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH-----cCCeEEEEcCCcccCCCCCCCC-ChhHHHHHHHHcCC
Q 020110          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGS  217 (331)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~~~~~  217 (331)
                                 ..     ..|+.+|...+.+.+.++.+     +++++.++.|+.+-.+...... ..........    
T Consensus       161 -----------~~-----~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~----  220 (257)
T d1xg5a_         161 -----------VT-----HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY----  220 (257)
T ss_dssp             -----------GG-----HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH----
T ss_pred             -----------cc-----HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcC----
Confidence                       01     25999999999999887743     5799999999877544211000 0011111111    


Q ss_pred             CCccCcCCCCceeHHHHHHHHHHhhcCCC
Q 020110          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       218 ~~~~~~~~~~~v~v~D~a~a~~~~l~~~~  246 (331)
                            ....++..+|+|++++.++..+.
T Consensus       221 ------~~~r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         221 ------EQMKCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             ------C---CBCHHHHHHHHHHHHHSCT
T ss_pred             ------CCCCCcCHHHHHHHHHHHhCChh
Confidence                  22446789999999999987653

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.81  E-value=5.7e-19  Score=147.76  Aligned_cols=226  Identities=13%  Similarity=0.149  Sum_probs=148.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC---CCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL---PGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      .+.|++|||||++.||+++++.|.++|+ +|++.+|+........+.   ......++.++.+|++++++++++++    
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999 999999986543332221   11111268999999999998887764    


Q ss_pred             ---CccEEEEcccCCCCCCCC----C----chhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCc-cceeccCCCCCCc
Q 020110           80 ---GCKGVFHVASPCTLEDPV----D----PEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSS-ISAIVPNPGWKGK  144 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~~~~----~----~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS-~~~~~~~~~~~~~  144 (331)
                         ++|++||+||........    +    .+...+++|+.++..+.+++...   +-..+|.++| .+...+.++.   
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~---  158 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDF---  158 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSS---
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCc---
Confidence               579999999976542211    1    25677899999999988876433   2235665555 3333332221   


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCC--hhHHHHHHHHcCCCC
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQGSKD  219 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~  219 (331)
                                       ..|+.+|...+.+.+.++.+   +|+++..+.||.|-.+.......  ...............
T Consensus       159 -----------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  221 (272)
T d1xkqa_         159 -----------------LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKE  221 (272)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT
T ss_pred             -----------------chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhc
Confidence                             26999999999998888755   58999999999997764321110  011111111111110


Q ss_pred             ccCcCCCCceeHHHHHHHHHHhhcCC---CCCceE-EEec
Q 020110          220 TQEYHWLGAVPVKDVAKAQVLLFESP---AASGRY-LCTN  255 (331)
Q Consensus       220 ~~~~~~~~~v~v~D~a~a~~~~l~~~---~~~g~~-~~~~  255 (331)
                      ..  ...-+...+|+|.++++++..+   ..+|.. .+.|
T Consensus       222 ~~--PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDG  259 (272)
T d1xkqa_         222 CI--PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADG  259 (272)
T ss_dssp             TC--TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             CC--CCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCc
Confidence            01  1233678899999999888532   356754 4443

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=9e-20  Score=151.14  Aligned_cols=217  Identities=15%  Similarity=0.109  Sum_probs=149.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCC-CCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ++|++|||||++.||+++++.|+++|+ +|++.+|+........ ++... .+.++.++.+|++++++++++++      
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999 9999999865433322 11111 12278999999999998887764      


Q ss_pred             -CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC----C---CCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 -GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF----G---VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                       ++|++||+|+...    ..+++..+++|+.++.++.+++...    +   ..++|++||..+..+.+..          
T Consensus        81 G~iDilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~----------  146 (254)
T d2gdza1          81 GRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ----------  146 (254)
T ss_dssp             SCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC----------
T ss_pred             CCcCeecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCc----------
Confidence             5899999999765    3457889999998888877766322    1   2469999998665544332          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHH--HH---HHcCCeEEEEcCCcccCCCCCCCCCh-----hHHHHHHHHcCCCCcc
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWE--FA---EKHGVDVVAIHPATCLGPLMQPYLNA-----SCAVLQQLLQGSKDTQ  221 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~--~~---~~~~~~~~~lR~~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~  221 (331)
                                ..|+.+|...+.+.+.  ++   ..+|+++..+.||.+-.+........     .......+....    
T Consensus       147 ----------~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~----  212 (254)
T d2gdza1         147 ----------PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMI----  212 (254)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHH----
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcC----
Confidence                      2699999998887764  22   25689999999999866532110000     000000000000    


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcCCCCCce-EEEec
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFESPAASGR-YLCTN  255 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~~~~~g~-~~~~~  255 (331)
                        ....+...+|+|+++++++.+....|. ..+.+
T Consensus       213 --p~~r~~~pedvA~~v~fL~s~~~itG~~i~VdG  245 (254)
T d2gdza1         213 --KYYGILDPPLIANGLITLIEDDALNGAIMKITT  245 (254)
T ss_dssp             --HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEET
T ss_pred             --CCCCCcCHHHHHHHHHHHHcCCCCCCCEEEECC
Confidence              112356789999999999987777784 44543

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.81  E-value=2.8e-19  Score=149.03  Aligned_cols=221  Identities=13%  Similarity=0.126  Sum_probs=146.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc----CCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA----LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      .+.|.+|||||++.||++++++|+++|+ +|++.+|+....+...+    ...... ++.++.+|++++++++++++   
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~-~~~~~~~Dvt~~~~v~~~~~~~~   80 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQ-NVNSVVADVTTDAGQDEILSTTL   80 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGG-GEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcC-ceEEEEccCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999 99999998654333221    111112 68999999999998887764   


Q ss_pred             ----CccEEEEcccCCCCC--------CCCCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccce-eccCCCCCC
Q 020110           80 ----GCKGVFHVASPCTLE--------DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISA-IVPNPGWKG  143 (331)
Q Consensus        80 ----~~d~vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~-~~~~~~~~~  143 (331)
                          ++|++||+||.....        ...++++..+++|+.++..+.+++...   +-..+|+++|..+ ..+.+..  
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~--  158 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDF--  158 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTS--
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCc--
Confidence                589999999875321        122346778999999999888876433   2245666666433 2232221  


Q ss_pred             ccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCC------ChhHHHHHHHH
Q 020110          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL------NASCAVLQQLL  214 (331)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~------~~~~~~~~~~~  214 (331)
                                        ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+......      .........+.
T Consensus       159 ------------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  220 (264)
T d1spxa_         159 ------------------PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMK  220 (264)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHH
T ss_pred             ------------------hhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHH
Confidence                              26999999999998888755   4899999999999877532210      00111111211


Q ss_pred             cCCCCccCcCCCCceeHHHHHHHHHHhhcCC---CCCceE-EEec
Q 020110          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESP---AASGRY-LCTN  255 (331)
Q Consensus       215 ~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~---~~~g~~-~~~~  255 (331)
                      ...|      ..-+...+|+|+++.+++..+   ...|.. .+.|
T Consensus       221 ~~~P------l~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDG  259 (264)
T d1spxa_         221 ECVP------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDG  259 (264)
T ss_dssp             HHCT------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             hcCC------CCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCC
Confidence            1111      234677899999999888533   356744 4443

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.81  E-value=3.2e-19  Score=148.35  Aligned_cols=223  Identities=19%  Similarity=0.148  Sum_probs=151.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc-cchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      ..+|++|||||++-||.++++.|+++|+ +|++..|+..+ .+...+.....+.++.++.+|++|+++++++++      
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999 99876654433 222222211112278999999999988887764      


Q ss_pred             -CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceec-cCCCCCCccccCCCC
Q 020110           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIV-PNPGWKGKVFDETSW  151 (331)
Q Consensus        80 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~-~~~~~~~~~~~E~~~  151 (331)
                       .+|++||+||.....    ...+.++..+++|+.+...+++++...  .-++++.++|..+.. +.+..          
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~----------  152 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNH----------  152 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSC----------
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCc----------
Confidence             479999999976542    233445788999999999999987654  223566666543322 22221          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCC---------CCCCCh-hHHHHHHHHcCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLM---------QPYLNA-SCAVLQQLLQGSK  218 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~---------~~~~~~-~~~~~~~~~~~~~  218 (331)
                                ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+..         ...... ...+...+....+
T Consensus       153 ----------~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  222 (259)
T d1ja9a_         153 ----------ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNP  222 (259)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTST
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCC
Confidence                      26999999999999888765   489999999999875421         001111 1222223333322


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~-~~~~~~  256 (331)
                            ...+...+|+|+++++++....  ..|. ..+.|+
T Consensus       223 ------l~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG  257 (259)
T d1ja9a_         223 ------LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  257 (259)
T ss_dssp             ------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ------CCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence                  2347789999999999887543  4664 455544

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.80  E-value=5e-19  Score=147.18  Aligned_cols=227  Identities=16%  Similarity=0.177  Sum_probs=153.1

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      +.+.|++|||||++.||++++++|+++|+ +|++.+|+..+.....+ +....+.++.++.+|+++++++.++++     
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999 99999998765433221 111112278999999999998887774     


Q ss_pred             --CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHh-----CCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 --~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                        .+|++||+|+.....    ...++++..+++|+.++..+.+++..     .....++..||..........    +  
T Consensus        85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~----~--  158 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----L--  158 (260)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----T--
T ss_pred             hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc----c--
Confidence              479999999875542    23344678899999999888776532     233456666664321111100    0  


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                      ..       ......|+.+|...+.+.+.++.+   +|+++.++.||.+-.+.....   ............+.      
T Consensus       159 ~~-------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~pl------  222 (260)
T d1h5qa_         159 NG-------SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNIPL------  222 (260)
T ss_dssp             TE-------ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCTT------
T ss_pred             cc-------CccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc---CHHHHHHHHhcCCC------
Confidence            00       001136999999999998888754   589999999999977653321   12233333333222      


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                      .-+...+|+|.++++++...  ...|. ..+.|
T Consensus       223 ~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  255 (260)
T d1h5qa_         223 NRFAQPEEMTGQAILLLSDHATYMTGGEYFIDG  255 (260)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             CCCcCHHHHHHHHHHHhcchhCCCcCceEEECC
Confidence            23567899999999888543  34674 44544

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.80  E-value=2e-19  Score=150.76  Aligned_cols=218  Identities=18%  Similarity=0.129  Sum_probs=149.5

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   79 (331)
                      .+.|++|||||++.||++++++|.++|+ +|++.+|+......+.+..  .. ++..+.+|++++++++++++       
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~--~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDH--GD-NVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--GG-GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc--CC-CeeEEecccccHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999 9999999865443332211  11 78999999999988877764       


Q ss_pred             CccEEEEcccCCCCCC-----CCC----chhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccc
Q 020110           80 GCKGVFHVASPCTLED-----PVD----PEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~-----~~~----~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                      .+|++||+||......     ..+    .++..+++|+.++..+.+++.    +.+ .++|++||..+..+.++.     
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~-----  152 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGG-----  152 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSC-----
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCC-----
Confidence            5799999999654321     111    256789999999988888763    333 578988987554443332     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCCCCCCChh-------HHHHHHHHcCC
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNAS-------CAVLQQLLQGS  217 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~-------~~~~~~~~~~~  217 (331)
                                     ..|+.+|...+.+.+.++.+.  ++++..+.||.|-.+...+.....       ......+....
T Consensus       153 ---------------~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (276)
T d1bdba_         153 ---------------PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVL  217 (276)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTC
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcC
Confidence                           269999999999888877653  499999999999776432211000       00111111111


Q ss_pred             CCccCcCCCCceeHHHHHHHHHHhhcC---CCCCceE-EEec
Q 020110          218 KDTQEYHWLGAVPVKDVAKAQVLLFES---PAASGRY-LCTN  255 (331)
Q Consensus       218 ~~~~~~~~~~~v~v~D~a~a~~~~l~~---~~~~g~~-~~~~  255 (331)
                      |      ..-+...+|+|.++++++..   ....|.. .+.|
T Consensus       218 P------lgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDG  253 (276)
T d1bdba_         218 P------IGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDG  253 (276)
T ss_dssp             T------TSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESS
T ss_pred             C------CCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECc
Confidence            1      22356789999999887742   3456744 4443

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.80  E-value=1.3e-18  Score=145.65  Aligned_cols=226  Identities=15%  Similarity=0.167  Sum_probs=151.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc-CC--CCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LP--GAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~--~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      .+.|++|||||++.||+++++.|+++|+ +|++.+|+........+ +.  .....++.++.+|++++++++++++    
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999 99999997654333221 11  1111168999999999988887764    


Q ss_pred             ---CccEEEEcccCCCCCC------CCCchhhhhHHHHHHHHHHHHHHHh----CCCCEEEEeCccceeccCCCCCCccc
Q 020110           80 ---GCKGVFHVASPCTLED------PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVF  146 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~  146 (331)
                         .+|++||+||......      ..++++..+++|+.++..+.+++..    .+-.+++++||.....+.++.     
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~-----  155 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGY-----  155 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTS-----
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCC-----
Confidence               5799999998654321      1234578899999999988887643    344567777775443332221     


Q ss_pred             cCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHHcCCCCcc
Q 020110          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDTQ  221 (331)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~  221 (331)
                                     ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.|......  ........+.........
T Consensus       156 ---------------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~i  220 (274)
T d1xhla_         156 ---------------PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECI  220 (274)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC
T ss_pred             ---------------ceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCC
Confidence                           26999999999988887755   4899999999999876422111  111111222221111111


Q ss_pred             CcCCCCceeHHHHHHHHHHhhcC---CCCCce-EEEec
Q 020110          222 EYHWLGAVPVKDVAKAQVLLFES---PAASGR-YLCTN  255 (331)
Q Consensus       222 ~~~~~~~v~v~D~a~a~~~~l~~---~~~~g~-~~~~~  255 (331)
                      |  ..-+...+|+|.++++++..   ....|. ..+.|
T Consensus       221 P--lgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDG  256 (274)
T d1xhla_         221 P--VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADG  256 (274)
T ss_dssp             T--TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             C--CCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCc
Confidence            1  23356899999999988852   235774 45544

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.79  E-value=3.5e-19  Score=147.39  Aligned_cols=212  Identities=11%  Similarity=0.047  Sum_probs=149.1

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-------CccE
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCKG   83 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   83 (331)
                      ++|||||++.||+.+++.|.++|+ +|++.+|+....+.+...      ...+..+|+++.++++++++       ++|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~------~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAF------AETYPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHH------HHHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhh------hCcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            689999999999999999999999 999999876665554432      22345688888877766653       5899


Q ss_pred             EEEcccCCCC-C----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           84 VFHVASPCTL-E----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        84 vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                      +||+|+.... .    ...+++...+++|+.++.++.+++.    +.+-.++|++||..+..+.++.             
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~-------------  141 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKEL-------------  141 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTC-------------
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccc-------------
Confidence            9999986432 1    1224457788999999888887653    3355789999998654433322             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCCh-----hHHHHHHHHcCCCCccCcCCC
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA-----SCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  226 (331)
                             ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+........     .......+....+      ..
T Consensus       142 -------~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~p------l~  208 (252)
T d1zmta1         142 -------STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA------LQ  208 (252)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS------SS
T ss_pred             -------cccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCC------CC
Confidence                   36999999999998888755   479999999999988754322111     1122233332222      22


Q ss_pred             CceeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 020110          227 GAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~~--~~g~~-~~~~  255 (331)
                      -+...+|+|.++++++....  ..|.. .+.|
T Consensus       209 R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdG  240 (252)
T d1zmta1         209 RLGTQKELGELVAFLASGSCDYLTGQVFWLAG  240 (252)
T ss_dssp             SCBCHHHHHHHHHHHHTTSCGGGTTCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            36789999999999986543  45644 4443

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.79  E-value=8.8e-19  Score=145.91  Aligned_cols=206  Identities=20%  Similarity=0.196  Sum_probs=148.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh----cCCCCCCCcEEEEEccCCCchHHHHHhcC----
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF----ALPGAGDANLRVFEADVLDSGAVSRAVEG----   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----   80 (331)
                      .++||||||+|.||.+++++|.++|+.+|+.+.|+..+.+...    ++... +.++.++.+|++|++++.++++.    
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-GARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc-cccccccccccchHHHHHHhhcccccc
Confidence            3589999999999999999999999845777788643322221    11111 22799999999999999888753    


Q ss_pred             --ccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCccceeccCCCCCCccccCCCCCCh
Q 020110           81 --CKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (331)
Q Consensus        81 --~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~  154 (331)
                        +|.|||+++.......    .+.....++.|+.++.++.++++..+..++|++||..+..+.++.             
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~-------------  154 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL-------------  154 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC-------------
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCccc-------------
Confidence              6899999997665322    223466789999999999999888888899999998887766553             


Q ss_pred             hhhhccCcchhHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHH
Q 020110          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (331)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~  234 (331)
                             ..|+.+|...+.+...+. ..|++++.+.||.+.+++....      .......       ......+..+++
T Consensus       155 -------~~YaAaka~l~~la~~~~-~~Gi~v~~I~pg~~~~~g~~~~------~~~~~~~-------~~G~~~~~~~~~  213 (259)
T d2fr1a1         155 -------GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEG------PVADRFR-------RHGVIEMPPETA  213 (259)
T ss_dssp             -------TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC------------------CT-------TTTEECBCHHHH
T ss_pred             -------HHHHHHHHhHHHHHHHHH-hCCCCEEECCCCcccCCccccc------hHHHHHH-------hcCCCCCCHHHH
Confidence                   379999999998877665 6789999999998877643211      0111000       112345789999


Q ss_pred             HHHHHHhhcCCCCCc
Q 020110          235 AKAQVLLFESPAASG  249 (331)
Q Consensus       235 a~a~~~~l~~~~~~g  249 (331)
                      ++++..++.......
T Consensus       214 ~~~l~~~l~~~~~~~  228 (259)
T d2fr1a1         214 CRALQNALDRAEVCP  228 (259)
T ss_dssp             HHHHHHHHHTTCSSC
T ss_pred             HHHHHHHHhCCCceE
Confidence            999999998775544

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.79  E-value=2.2e-18  Score=142.42  Aligned_cols=173  Identities=18%  Similarity=0.174  Sum_probs=128.0

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHH---CCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLD---NNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~---~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      .||+||||||++.||..++++|++   +|+ +|++..|+......+.++....+ ++.++.+|++|+++++++++     
T Consensus         1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           1 HMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHS-NIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCT-TEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCC-cEEEEEEEeccHHHHHHHHhhhHHH
Confidence            388999999999999999999985   688 99999998877655544322233 89999999999988776543     


Q ss_pred             ----CccEEEEcccCCCCCC-----CCCchhhhhHHHHHHHHHHHHHHHhC---------------CCCEEEEeCcccee
Q 020110           80 ----GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKRF---------------GVRRVVVTSSISAI  135 (331)
Q Consensus        80 ----~~d~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---------------~~~~~v~~SS~~~~  135 (331)
                          .+|++||+||......     ..++.+..+++|+.++..+.+++...               +..++|++||..+.
T Consensus        79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~  158 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  158 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence                3799999999755421     12224678999999999888876321               34689999986443


Q ss_pred             ccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCC
Q 020110          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLM  199 (331)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~  199 (331)
                      ......            +     ....|+.||.....+.+.++.+   .|+++..+.||.|-.+..
T Consensus       159 ~~~~~~------------~-----~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~  208 (248)
T d1snya_         159 IQGNTD------------G-----GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG  208 (248)
T ss_dssp             STTCCS------------C-----CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT
T ss_pred             cCCCCC------------C-----ChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcc
Confidence            221110            0     0126999999999888877644   479999999999977653

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.78  E-value=2.8e-18  Score=145.52  Aligned_cols=224  Identities=13%  Similarity=0.025  Sum_probs=148.5

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      +.+.|++|||||+|.||++++++|+++|+ +|++.+|+..+..... ++....+..+.++.+|+++.++++++++     
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            45678999999999999999999999999 9999999865433222 1111112278899999999998876653     


Q ss_pred             --CccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHHH-----hCCCCEEEEeCccceeccCCCCCCccccC
Q 020110           80 --GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAK-----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                        ++|++||+|+.......    ..+....+.+|..+...+...+.     ..+...++.+||.....+.+..       
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~-------  173 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV-------  173 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTC-------
T ss_pred             ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccccc-------
Confidence              58999999997654221    22345667778777776655432     2234457777776443332221       


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                   ..|+.+|...+.+.+.++.+   +|+++.++.||.+-.+....................+      .
T Consensus       174 -------------~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~p------l  234 (294)
T d1w6ua_         174 -------------VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP------C  234 (294)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT------T
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCC------C
Confidence                         26999999999999988755   4799999999999887643222112122333333222      2


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCceE-EEecc
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGRY-LCTNG  256 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~~  256 (331)
                      .-+...+|+|.++.+++...  ...|.. .+.|+
T Consensus       235 ~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG  268 (294)
T d1w6ua_         235 GRLGTVEELANLAAFLCSDYASWINGAVIKFDGG  268 (294)
T ss_dssp             SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            34667899999999998643  356744 45443

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.77  E-value=2.3e-17  Score=138.03  Aligned_cols=223  Identities=17%  Similarity=0.113  Sum_probs=150.9

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhh-cCCCCCCCcEEEEEccCCCchHHHHHhc----
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   79 (331)
                      +.+.|++|||||++-||+.+++.|+++|+ +|++.+|+..+. .... .+..... ++.++.+|+++++++.+.++    
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~-~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCC-ceeeEeCCCCCHHHHHHHHHHHHH
Confidence            35578999999999999999999999999 999888765432 1111 1111122 78999999999988887764    


Q ss_pred             ---CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCC
Q 020110           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (331)
Q Consensus        80 ---~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~  150 (331)
                         .+|++||+++.....    ...+++...+++|+.++..+.+++...  .-+++++++|.........          
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~----------  162 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP----------  162 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS----------
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccccc----------
Confidence               479999999876542    223445778999999999999987654  2357777777543221111          


Q ss_pred             CCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCC--------CCCChhHHHHH--HHHcCC
Q 020110          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQ--------PYLNASCAVLQ--QLLQGS  217 (331)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~--------~~~~~~~~~~~--~~~~~~  217 (331)
                               ....|+.+|...+.+.+.++.+   +|+++..+.||.+-.+...        ...........  ......
T Consensus       163 ---------~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (272)
T d1g0oa_         163 ---------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS  233 (272)
T ss_dssp             ---------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC
T ss_pred             ---------chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccC
Confidence                     1126999999999999888765   5899999999999765210        00000111111  111221


Q ss_pred             CCccCcCCCCceeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 020110          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (331)
Q Consensus       218 ~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~-~~~~  255 (331)
                      +      ..-+...+|+|.++++++....  .+|.. .+.|
T Consensus       234 P------lgR~~~peevA~~v~fL~s~~s~~itG~~i~vDG  268 (272)
T d1g0oa_         234 P------LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG  268 (272)
T ss_dssp             T------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             C------CCCCcCHHHHHHHHHHHhCchhcCccCceEeECC
Confidence            1      2347889999999999986533  46644 4444

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1e-18  Score=147.02  Aligned_cols=223  Identities=25%  Similarity=0.233  Sum_probs=146.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEE---ecCCCccchhh----cCCCCCCCcEEEEEccCCCchHHHHHhc---
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINAT---VFPGSDSSHLF----ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~---~r~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   79 (331)
                      |-||||||++.||+++++.|.++|. +|+.+   .|+......+.    .+....+ ++..+.+|++|++++.++++   
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga-~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~   80 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPG-SLETLQLDVRDSKSVAAARERVT   80 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTT-SEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCC-CeEEEEEecCChhhhHHHHHHHHHHhccCC-ceEEEeccccchHhhhhhhhhcc
Confidence            4578999999999999999999997 65444   34433322222    2222233 89999999999999988774   


Q ss_pred             --CccEEEEcccCCCCCC----CCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCccccCC
Q 020110           80 --GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (331)
Q Consensus        80 --~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~E~  149 (331)
                        .+|++||+|+......    ..+++...+++|+.++.++.+++    ++.+-.++|++||..+..+.+..        
T Consensus        81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~--------  152 (285)
T d1jtva_          81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN--------  152 (285)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTC--------
T ss_pred             ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCc--------
Confidence              3799999998766532    33445778999999999888876    34456789999998665544432        


Q ss_pred             CCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHH--------HHHHcCCC
Q 020110          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVL--------QQLLQGSK  218 (331)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~--------~~~~~~~~  218 (331)
                                  ..|+.+|...+.+.+.++.+   +|++++++.||.+-.+.............        .+......
T Consensus       153 ------------~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (285)
T d1jtva_         153 ------------DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLA  220 (285)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHH
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHH
Confidence                        37999999999999888755   48999999999998765332111110100        00000000


Q ss_pred             CccCcCCCCceeHHHHHHHHHHhhcCCCCCceEEEe
Q 020110          219 DTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCT  254 (331)
Q Consensus       219 ~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g~~~~~  254 (331)
                      .............+|+|++++.++..+.+.-.|+.+
T Consensus       221 ~~~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g  256 (285)
T d1jtva_         221 HSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTT  256 (285)
T ss_dssp             HHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred             HHhhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecH
Confidence            000000112456899999999999877655456544

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.76  E-value=1.6e-18  Score=146.70  Aligned_cols=209  Identities=16%  Similarity=0.052  Sum_probs=142.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc------hhhcCCCCCCCcEEEEEccCCCchHHHHHhc-
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS------HLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   79 (331)
                      .+.|++|||||++.||+.+++.|.++|+ +|++.+|+.....      .+++.............+|+.+.++++++++ 
T Consensus         5 l~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~   83 (302)
T d1gz6a_           5 FDGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT   83 (302)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence            4578999999999999999999999999 9999887543211      1111000000023355688888777665553 


Q ss_pred             ------CccEEEEcccCCCCC----CCCCchhhhhHHHHHHHHHHHHHHH----hCCCCEEEEeCccceeccCCCCCCcc
Q 020110           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        80 ------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                            ++|++||+||.....    ...++++..+++|+.++.++.+++.    +.+-.++|++||..+.++.++.    
T Consensus        84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~----  159 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ----  159 (302)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC----
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCc----
Confidence                  589999999976542    2334568889999999999988763    3455799999998776665543    


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccC
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (331)
                                      ..|+.+|...+.+.+.++.+   +|+++..+-|+.+-.+....    ...              
T Consensus       160 ----------------~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~----~~~--------------  205 (302)
T d1gz6a_         160 ----------------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETV----MPE--------------  205 (302)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGG----SCH--------------
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhc----CcH--------------
Confidence                            37999999999999888755   48999999998763332111    001              


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCC-CCCc-eEEEec
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESP-AASG-RYLCTN  255 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~-~~~g-~~~~~~  255 (331)
                       ....++..+|+|.++++++... ...| .+.+.|
T Consensus       206 -~~~~~~~PedvA~~v~fL~S~~a~itG~~i~vdG  239 (302)
T d1gz6a_         206 -DLVEALKPEYVAPLVLWLCHESCEENGGLFEVGA  239 (302)
T ss_dssp             -HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEET
T ss_pred             -hhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCC
Confidence             1112344699999999887533 2345 334433

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4e-17  Score=134.82  Aligned_cols=212  Identities=18%  Similarity=0.142  Sum_probs=146.9

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.++|.+|||||++.||.+++++|.++|+ +|++.+|+........+...  . +......|+.+.+.++....      
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLG--N-NCVFAPADVTSEKDVQTALALAKGKF   77 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHC--T-TEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhC--C-Cccccccccccccccccccccccccc
Confidence            35688999999999999999999999999 99999998766544332211  1 78888999998766654442      


Q ss_pred             -CccEEEEcccCCCCCC----------CCCchhhhhHHHHHHHHHHHHHHHhC----------CCCEEEEeCccceeccC
Q 020110           80 -GCKGVFHVASPCTLED----------PVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVPN  138 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~SS~~~~~~~  138 (331)
                       ..|.++++++......          ..+.+...+++|+.++.++.+++...          +-.++|++||..+..+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence             4688888876543211          11345678999999999999887432          23479999998765544


Q ss_pred             CCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHc
Q 020110          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ  215 (331)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~  215 (331)
                      ++.                    ..|+.+|...+.+.+.++.+.   |+++..+.||.+..+.....   .......+..
T Consensus       158 ~~~--------------------~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~  214 (248)
T d2o23a1         158 VGQ--------------------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL---PEKVCNFLAS  214 (248)
T ss_dssp             TTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHH
T ss_pred             CCc--------------------hHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcC---CHHHHHHHHh
Confidence            432                    379999999999999887654   79999999999987753321   1111112222


Q ss_pred             CCCCccCcCCCCceeHHHHHHHHHHhhcCCCCCc
Q 020110          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG  249 (331)
Q Consensus       216 ~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~~~g  249 (331)
                      ..+.     ..-+...+|+|+++++++++...+|
T Consensus       215 ~~pl-----~~R~g~peevA~~v~fL~s~~~itG  243 (248)
T d2o23a1         215 QVPF-----PSRLGDPAEYAHLVQAIIENPFLNG  243 (248)
T ss_dssp             TCSS-----SCSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred             cCCC-----CCCCcCHHHHHHHHHHHHhCCCCCc
Confidence            1111     1235688999999999887655555

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.7e-18  Score=142.07  Aligned_cols=217  Identities=18%  Similarity=0.093  Sum_probs=142.7

Q ss_pred             CCeE-EEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhc-CCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            9 EETV-CVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         9 ~~~v-lVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +|+| |||||++.||..++++|+++ |+ .|++..|+........+ +..... ++.++.+|++|.++++++++      
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dvs~~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEY   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEEecCCHHHHHHHHHHHHHhc
Confidence            3565 99999999999999999986 88 99999998765433322 111122 78999999999998887664      


Q ss_pred             -CccEEEEcccCCCCCCCCC----chhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccc------
Q 020110           80 -GCKGVFHVASPCTLEDPVD----PEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF------  146 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~------  146 (331)
                       .+|++||+||........+    +....+++|+.++..+.+++...  .-.++|++||.....+.+..  .|.      
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~--~~y~~~k~~  157 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSC--SPELQQKFR  157 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTS--CHHHHHHHH
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceecccccc--chhhhhhhc
Confidence             5799999999865533222    23567899999999999988654  22489999997654432221  000      


Q ss_pred             ----cCCC-------------CCChhhhhccCcchhHHHHHHHHHHHHHHHH-------cCCeEEEEcCCcccCCCCCCC
Q 020110          147 ----DETS-------------WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-------HGVDVVAIHPATCLGPLMQPY  202 (331)
Q Consensus       147 ----~E~~-------------~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-------~~~~~~~lR~~~v~G~~~~~~  202 (331)
                          .+..             .........+...|+.||.....+.+.++++       .++++..+.||.|-.+...+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~  237 (275)
T d1wmaa1         158 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK  237 (275)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT
T ss_pred             ccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc
Confidence                0000             0000000112236999999988776654433       389999999999976643211


Q ss_pred             CChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcC-CC---CCceEEE
Q 020110          203 LNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES-PA---ASGRYLC  253 (331)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~-~~---~~g~~~~  253 (331)
                                              -...++|.|+.++++... +.   ..|.|+-
T Consensus       238 ------------------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         238 ------------------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             ------------------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ------------------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence                                    123578999888776532 22   3456654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.74  E-value=8.7e-17  Score=132.79  Aligned_cols=204  Identities=19%  Similarity=0.110  Sum_probs=136.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--------
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------   79 (331)
                      .|+||||||++.||.+++++|+++|+ ..|++..|+......+.+...   .++.++.+|+++.++++++++        
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~---~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKD---SRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCC---TTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhC---CceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            37999999999999999999999995 268888888766655554332   279999999999988776653        


Q ss_pred             -CccEEEEcccCCCC-CC----CCCchhhhhHHHHHHHHHHHHHHHh----C-----------CCCEEEEeCccceeccC
Q 020110           80 -GCKGVFHVASPCTL-ED----PVDPEKELILPAVQGTLNVLEAAKR----F-----------GVRRVVVTSSISAIVPN  138 (331)
Q Consensus        80 -~~d~vih~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~-----------~~~~~v~~SS~~~~~~~  138 (331)
                       ++|++||+||.... ..    ..++....+++|+.++..+.+++..    .           ...+++.+|+.......
T Consensus        80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence             37999999997543 11    1223467899999999998887531    1           12467777765332221


Q ss_pred             CCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHc
Q 020110          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ  215 (331)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~  215 (331)
                      ...       .....+.      ..|+.||.....+.+.++++   .|+++..+.||.|-.+....              
T Consensus       160 ~~~-------~~~~~~~------~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~--------------  212 (250)
T d1yo6a1         160 NTS-------GSAQFPV------LAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------------  212 (250)
T ss_dssp             CCS-------TTSSSCB------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------
T ss_pred             Ccc-------cccchhH------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC--------------
Confidence            111       0000111      25999999999999888755   47999999999886553211              


Q ss_pred             CCCCccCcCCCCceeHHHHHHHHHHhhcCCC--CCceEE
Q 020110          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (331)
Q Consensus       216 ~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~~--~~g~~~  252 (331)
                                ...+..++.++.++..+....  ..|.|+
T Consensus       213 ----------~~~~~~e~~a~~~~~~~~~~~~~~sG~f~  241 (250)
T d1yo6a1         213 ----------NAALTVEQSTAELISSFNKLDNSHNGRFF  241 (250)
T ss_dssp             ----------------HHHHHHHHHHHTTCCGGGTTCEE
T ss_pred             ----------CCCCCHHHHHHHHHHHHhcCCCCCCeEEE
Confidence                      012456888888888876543  456654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.73  E-value=2.9e-17  Score=136.41  Aligned_cols=212  Identities=16%  Similarity=0.082  Sum_probs=145.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHH---CCCCEEEEEecCCCccchhhcCC-C-CCCCcEEEEEccCCCchHHHHHhc--
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLD---NNYTSINATVFPGSDSSHLFALP-G-AGDANLRVFEADVLDSGAVSRAVE--   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~---~g~~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~~~~Dl~~~~~~~~~~~--   79 (331)
                      .+.|.++||||++.||..++++|.+   +|+ +|++..|+......+.+.. . ..+.++.++.+|+++++++.++++  
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            3467899999999999999999976   799 9999999876544432211 0 011278899999999998887752  


Q ss_pred             ---------CccEEEEcccCCCCC-------CCCCchhhhhHHHHHHHHHHHHHHHhC----C--CCEEEEeCccceecc
Q 020110           80 ---------GCKGVFHVASPCTLE-------DPVDPEKELILPAVQGTLNVLEAAKRF----G--VRRVVVTSSISAIVP  137 (331)
Q Consensus        80 ---------~~d~vih~a~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~~v~~SS~~~~~~  137 (331)
                               ..|++||+|+.....       ...+++...+++|+.++..+.+++...    +  ..++|++||..+..+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence                     357999999864321       112345678999999999999988654    1  247999999866544


Q ss_pred             CCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH-cCCeEEEEcCCcccCCCCCCCC--ChhHHHHHHHH
Q 020110          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLL  214 (331)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~  214 (331)
                      .++.                    ..|+.+|...+.+.+.++.+ .|+++..+.||.+-.+......  .........+.
T Consensus       163 ~~~~--------------------~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~  222 (259)
T d1oaaa_         163 YKGW--------------------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQ  222 (259)
T ss_dssp             CTTC--------------------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHH
T ss_pred             Cccc--------------------hHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHH
Confidence            3332                    37999999999999988755 5899999999999776321000  00001111111


Q ss_pred             cCCCCccCcCCCCceeHHHHHHHHHHhhcCC
Q 020110          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       215 ~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~  245 (331)
                      ...      ....+...+|+|++++.++...
T Consensus       223 ~~~------~~~r~~~p~evA~~i~~ll~~~  247 (259)
T d1oaaa_         223 KLK------SDGALVDCGTSAQKLLGLLQKD  247 (259)
T ss_dssp             HHH------HTTCSBCHHHHHHHHHHHHHHC
T ss_pred             hcC------CCCCCCCHHHHHHHHHHHhhhc
Confidence            100      1123467899999999888643

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.73  E-value=2.2e-17  Score=135.15  Aligned_cols=189  Identities=12%  Similarity=0.130  Sum_probs=133.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-------hc--
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-------VE--   79 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-------~~--   79 (331)
                      .|+||||||+|.||+++++.|.++|+ +|++++++......          ....+..|..+.++....       +.  
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEAS----------ASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTSS----------EEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc----------ccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999 99998876543211          334455666554443322       22  


Q ss_pred             CccEEEEcccCCCCC-CC----CCchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCC
Q 020110           80 GCKGVFHVASPCTLE-DP----VDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (331)
Q Consensus        80 ~~d~vih~a~~~~~~-~~----~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~  152 (331)
                      ++|++||+||..... ..    .+.++..+++|+.++.++.+++...  +-.++|++||..+..+.++.           
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~-----------  139 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM-----------  139 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB-----------
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCC-----------
Confidence            379999999854331 11    1234667899999999988887554  23579999998654433321           


Q ss_pred             ChhhhhccCcchhHHHHHHHHHHHHHHHH-----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCC
Q 020110          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (331)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (331)
                               ..|+.+|...+.+.+.++.+     .|+++..+.||.+..|..           ++.....      ..-.
T Consensus       140 ---------~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~-----------~~~~~~~------~~~~  193 (236)
T d1dhra_         140 ---------IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------RKSMPEA------DFSS  193 (236)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------HHHSTTS------CGGG
T ss_pred             ---------cccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc-----------hhhCccc------hhhc
Confidence                     37999999999999998754     479999999999876531           1111110      1234


Q ss_pred             ceeHHHHHHHHHHhhcCC
Q 020110          228 AVPVKDVAKAQVLLFESP  245 (331)
Q Consensus       228 ~v~v~D~a~a~~~~l~~~  245 (331)
                      |+..+|+|+.+..++...
T Consensus       194 ~~~pe~va~~~~~l~s~~  211 (236)
T d1dhra_         194 WTPLEFLVETFHDWITGN  211 (236)
T ss_dssp             SEEHHHHHHHHHHHHTTT
T ss_pred             CCCHHHHHHHHHHHhCCC
Confidence            788999999999888654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=1.1e-16  Score=132.94  Aligned_cols=219  Identities=14%  Similarity=0.084  Sum_probs=147.5

Q ss_pred             CCCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.|++|||||+|  .||+++++.|+++|+ +|++..|+........+.....+ .......|+.+..++...+.      
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcC-CcceeecccchHHHHHHHHHHhhhcc
Confidence            468999999998  799999999999999 99999998654444333222222 56778899998877665553      


Q ss_pred             -CccEEEEcccCCCCCCCC---------CchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCcccc
Q 020110           80 -GCKGVFHVASPCTLEDPV---------DPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~  147 (331)
                       ..|++||+|+........         +.....+..|+.+...+.+++...  +-+.+|++||.....+.+..      
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~------  155 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY------  155 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT------
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCc------
Confidence             369999999875432211         112445566777777777777554  22458888887554333221      


Q ss_pred             CCCCCChhhhhccCcchhHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcC
Q 020110          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (331)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
                                    ..|+.+|...+.+.+.++.+.   |+++.++.||.|..+..... ..............+      
T Consensus       156 --------------~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~p------  214 (258)
T d1qsga_         156 --------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVTP------  214 (258)
T ss_dssp             --------------THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHST------
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc-chhhhHHHHHHhCCC------
Confidence                          369999999999998887664   69999999999988865432 112222222222222      


Q ss_pred             CCCceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          225 WLGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       225 ~~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      ..-+...+|+|.++.+++...  ...|.. .+.|
T Consensus       215 l~R~~~peeia~~v~fL~s~~s~~itG~~i~vDG  248 (258)
T d1qsga_         215 IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG  248 (258)
T ss_dssp             TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCccCceEEECc
Confidence            123677999999999988643  356754 4443

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.72  E-value=2.7e-17  Score=134.59  Aligned_cols=188  Identities=16%  Similarity=0.190  Sum_probs=131.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-------h--cC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-------V--EG   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-------~--~~   80 (331)
                      .|||||||+|.||++++++|+++|+ +|++++|++.....          ....+.+|..+.+.....       +  ..
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD----------SNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS----------EEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhccc----------ccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            4899999999999999999999999 99999997653211          334455777654433322       2  24


Q ss_pred             ccEEEEcccCCCC-CCCC----CchhhhhHHHHHHHHHHHHHHHhC--CCCEEEEeCccceeccCCCCCCccccCCCCCC
Q 020110           81 CKGVFHVASPCTL-EDPV----DPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (331)
Q Consensus        81 ~d~vih~a~~~~~-~~~~----~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~  153 (331)
                      +|++||+||.... ....    +..+..+++|+.++..+.+++...  +-.++|++||..+..+.++.            
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~------------  139 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSM------------  139 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB------------
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccc------------
Confidence            7999999996443 1111    223557899999998888877554  22579999998665544332            


Q ss_pred             hhhhhccCcchhHHHHHHHHHHHHHHHH-----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCc
Q 020110          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (331)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (331)
                              ..|+.+|...+.+.+.++.+     .++++..+.|+.+-.+.           .++.....      ....|
T Consensus       140 --------~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~-----------~~~~~~~~------~~~~~  194 (235)
T d1ooea_         140 --------IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-----------NRKWMPNA------DHSSW  194 (235)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-----------HHHHSTTC------CGGGC
T ss_pred             --------cchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc-----------hhhhCcCC------ccccC
Confidence                    37999999999999998755     36788999999875432           11221111      22457


Q ss_pred             eeHHHHHHHHHHhhcCC
Q 020110          229 VPVKDVAKAQVLLFESP  245 (331)
Q Consensus       229 v~v~D~a~a~~~~l~~~  245 (331)
                      +..+|+++.++.++.++
T Consensus       195 ~~~~~va~~~~~~l~~~  211 (235)
T d1ooea_         195 TPLSFISEHLLKWTTET  211 (235)
T ss_dssp             BCHHHHHHHHHHHHHCG
T ss_pred             CCHHHHHHHHHHHhcCc
Confidence            88999999987666543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.67  E-value=2.4e-15  Score=123.39  Aligned_cols=205  Identities=21%  Similarity=0.176  Sum_probs=141.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------CccE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCKG   83 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~   83 (331)
                      |++|||||++.||++++++|+++|+ +|++.+|+....            +...+++|+.+......+..      ..+.
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   68 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-RVVVLDLRREGE------------DLIYVEGDVTREEDVRRAVARAQEEAPLFA   68 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCSS------------SSEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcccc------------cceEeeccccchhhhHHHHHhhhccccccc
Confidence            6899999999999999999999999 999999876432            55678899998766655543      2455


Q ss_pred             EEEcccCCCCCC--------CCCchhhhhHHHHHHHHHHHHHHHhC----------CCCEEEEeCccceeccCCCCCCcc
Q 020110           84 VFHVASPCTLED--------PVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVPNPGWKGKV  145 (331)
Q Consensus        84 vih~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~~SS~~~~~~~~~~~~~~  145 (331)
                      ++++++......        ..+.....+++|+.+...+.+.+...          +..++|++||..+..+.++.    
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~----  144 (241)
T d1uaya_          69 VVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ----  144 (241)
T ss_dssp             EEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC----
T ss_pred             hhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCc----
Confidence            565554332211        11223567899988888777765321          23579999998665554442    


Q ss_pred             ccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccC
Q 020110          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (331)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (331)
                                      ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+.....   ............+.   
T Consensus       145 ----------------~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~---~~~~~~~~~~~~~~---  202 (241)
T d1uaya_         145 ----------------AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVPF---  202 (241)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCCS---
T ss_pred             ----------------hhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh---hhhHHHHHHhcCCC---
Confidence                            37999999999999888765   589999999999977653321   11222222222221   


Q ss_pred             cCCCCceeHHHHHHHHHHhhcCCCCCceE-EEec
Q 020110          223 YHWLGAVPVKDVAKAQVLLFESPAASGRY-LCTN  255 (331)
Q Consensus       223 ~~~~~~v~v~D~a~a~~~~l~~~~~~g~~-~~~~  255 (331)
                        ..-+...+|+|.++++++.+...+|.. .+.|
T Consensus       203 --~~R~g~pedvA~~v~fL~s~~~iTG~~i~VDG  234 (241)
T d1uaya_         203 --PPRLGRPEEYAALVLHILENPMLNGEVVRLDG  234 (241)
T ss_dssp             --SCSCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             --CCCCcCHHHHHHHHHHHHhCCCCCCCEEEECC
Confidence              123557899999999998866667754 4443

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.7e-16  Score=131.14  Aligned_cols=202  Identities=15%  Similarity=0.049  Sum_probs=141.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC-CCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      .++|++|||||++.||.+++++|+++|+ +|++.+|+.......... ....+..+..+.+|+.+.+.+.....      
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999 999999986554333221 11112268888899998876665443      


Q ss_pred             -CccEEEEcccCCCCCCC----CCchhhhhHHHHHHHHHHHHHHHhC---CCCEEEEeCccceeccCCCCCCccccCCCC
Q 020110           80 -GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~  151 (331)
                       .+|+++|+|+.......    .++....+++|+.++..+.+++...   +-.++|++||..+..+.+..          
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~----------  160 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV----------  160 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTC----------
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCc----------
Confidence             57999999987654322    2234667999999988888776422   23689999998665544332          


Q ss_pred             CChhhhhccCcchhHHHHHHHHHHHHHHHH-----cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCC
Q 020110          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (331)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (331)
                                ..|+.||...+.+.+.++.+     .++++..+.||.|-.+.           ..+...+.      ...
T Consensus       161 ----------~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~-----------~~~~~~~~------~~~  213 (269)
T d1xu9a_         161 ----------AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-----------AMKAVSGI------VHM  213 (269)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-----------HHHHSCGG------GGG
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH-----------HHHhccCC------ccc
Confidence                      37999999999988887754     36899999999885532           11211111      123


Q ss_pred             CceeHHHHHHHHHHhhcCCC
Q 020110          227 GAVPVKDVAKAQVLLFESPA  246 (331)
Q Consensus       227 ~~v~v~D~a~a~~~~l~~~~  246 (331)
                      .....+++|+.++..+....
T Consensus       214 ~~~~~e~~a~~i~~~~~~~~  233 (269)
T d1xu9a_         214 QAAPKEECALEIIKGGALRQ  233 (269)
T ss_dssp             GCBCHHHHHHHHHHHHHTTC
T ss_pred             cCCCHHHHHHHHHHHhhcCC
Confidence            34667899998887765443

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.65  E-value=3.1e-15  Score=125.20  Aligned_cols=219  Identities=14%  Similarity=0.104  Sum_probs=135.3

Q ss_pred             CCCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc------
Q 020110            8 EEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (331)
Q Consensus         8 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   79 (331)
                      +.|++|||||+|  .||.+++++|+++|+ +|++.+|+........++..... ...++..|+++.+++.++++      
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCC-ceeEeeecccchhhHHHHHHHHHHHc
Confidence            468999999887  799999999999999 99999998654444443322222 66788999999888776663      


Q ss_pred             -CccEEEEcccCCCCCCCC----CchhhhhHHHHH----HHHHHHHHHHhC-CCCE-EEEeCccceeccCCCCCCccccC
Q 020110           80 -GCKGVFHVASPCTLEDPV----DPEKELILPAVQ----GTLNVLEAAKRF-GVRR-VVVTSSISAIVPNPGWKGKVFDE  148 (331)
Q Consensus        80 -~~d~vih~a~~~~~~~~~----~~~~~~~~~n~~----~~~~l~~~~~~~-~~~~-~v~~SS~~~~~~~~~~~~~~~~E  148 (331)
                       .+|++||+++........    ......+..+..    +...+....... +... ++.+|+. +......        
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~-~~~~~~~--------  152 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYL-GSTKYMA--------  152 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECG-GGTSBCT--------
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccc-ccccccc--------
Confidence             579999999876542111    111222222222    233333333322 2233 4444443 3221111        


Q ss_pred             CCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                                 ....|+.+|...+.+.+..+.+   +|+++.++.||.+..+....... ............      ..
T Consensus       153 -----------~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~~------p~  214 (274)
T d2pd4a1         153 -----------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-FRMILKWNEINA------PL  214 (274)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-HHHHHHHHHHHS------TT
T ss_pred             -----------cchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc-hHHHHHHHhhhh------hc
Confidence                       1136999999999988877644   58999999999998876433211 111111111111      13


Q ss_pred             CCceeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 020110          226 LGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~~--~~g~~-~~~~  255 (331)
                      .-+..++|+|.++.+++....  .+|.. .+.+
T Consensus       215 ~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDG  247 (274)
T d2pd4a1         215 RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDA  247 (274)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCCcCHHHHHHHHHHHhChhhCCCcCceEEECC
Confidence            456789999999999887532  46644 4443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.62  E-value=1.4e-14  Score=121.86  Aligned_cols=216  Identities=14%  Similarity=0.064  Sum_probs=134.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhc----CCCC--------------CCCcEEEEEccCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFA----LPGA--------------GDANLRVFEADVL   69 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~----~~~~--------------~~~~~~~~~~Dl~   69 (331)
                      |+-+|||||++.||++++++|+++|+ +|++..|+..+. ..+..    ....              ....+....+|++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~   80 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT   80 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCC
Confidence            56789999999999999999999999 998877654321 11111    0000              0002334456688


Q ss_pred             CchHHHHHhc-------CccEEEEcccCCCCCCCCCc------------------hhhhhHHHHHHHHHHHHHHHh----
Q 020110           70 DSGAVSRAVE-------GCKGVFHVASPCTLEDPVDP------------------EKELILPAVQGTLNVLEAAKR----  120 (331)
Q Consensus        70 ~~~~~~~~~~-------~~d~vih~a~~~~~~~~~~~------------------~~~~~~~n~~~~~~l~~~~~~----  120 (331)
                      +.++++++++       ++|++||+||........+.                  ....+.+|+.++..+.+++..    
T Consensus        81 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          81 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            8887777653       58999999997654221111                  113577888888888776532    


Q ss_pred             ------CCCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcC
Q 020110          121 ------FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHP  191 (331)
Q Consensus       121 ------~~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~  191 (331)
                            .+..++|+++|.....+.++.                    ..|+.+|...+.+.+.++.+   +|+++..+.|
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~~~~~--------------------~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~P  220 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQPLLGY--------------------TIYTMAKGALEGLTRSAALELAPLQIRVNGVGP  220 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             hHHHhcCCCCcccccccccccCCccce--------------------eeeccccccchhhhHHHHHHhCCcccccccccc
Confidence                  123467777775443322221                    37999999999999888755   4899999999


Q ss_pred             CcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       192 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      |.+-....     .............+.     ..-+...+|+|+++++++...  ...|.. .+.|
T Consensus       221 G~t~~~~~-----~~~~~~~~~~~~~pl-----~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDG  277 (284)
T d1e7wa_         221 GLSVLVDD-----MPPAVWEGHRSKVPL-----YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  277 (284)
T ss_dssp             SSBCCGGG-----SCHHHHHHHHTTCTT-----TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cccccccc-----CCHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHHhCchhcCccCCeEEECc
Confidence            96432221     112333343333221     123567899999999988643  346754 4443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.59  E-value=1.2e-14  Score=121.06  Aligned_cols=219  Identities=15%  Similarity=0.098  Sum_probs=134.3

Q ss_pred             CCCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhc-----
Q 020110            8 EEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (331)
Q Consensus         8 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   79 (331)
                      +.|++|||||+|  .||.+++++|.++|+ +|++..|+..+. ..+.+...   .+...+++|+++++++..+++     
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~---~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLP---AKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSS---SCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcC---CceeeEeeecccccccccccchhhhc
Confidence            468999999765  599999999999999 999998876543 22222221   267788999999876655432     


Q ss_pred             -----CccEEEEcccCCCCCC---------CCCchhhhhHHHHHHHHHHHHHHHhCC-CCEEEEeCccceeccCCCCCCc
Q 020110           80 -----GCKGVFHVASPCTLED---------PVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGK  144 (331)
Q Consensus        80 -----~~d~vih~a~~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~  144 (331)
                           .+|+++|+++......         ........+..|+.......+++.... ....+.++|.....+.+..   
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~---  157 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAY---  157 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTT---
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCccc---
Confidence                 3699999998653211         111223345556666666666655442 2234444443232222211   


Q ss_pred             cccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCC----CCCChh-----HHHHHH
Q 020110          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQ----PYLNAS-----CAVLQQ  212 (331)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~----~~~~~~-----~~~~~~  212 (331)
                                       ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+...    ......     ..+...
T Consensus       158 -----------------~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  220 (268)
T d2h7ma1         158 -----------------NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEG  220 (268)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred             -----------------chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHH
Confidence                             37999999999999888755   4799999999988765311    000000     111111


Q ss_pred             HHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          213 LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       213 ~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      ....-|.     .+.+..++|+|+++.+++...  ...|.. .+.+
T Consensus       221 ~~~~~pl-----~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDG  261 (268)
T d2h7ma1         221 WDQRAPI-----GWNMKDATPVAKTVCALLSDWLPATTGDIIYADG  261 (268)
T ss_dssp             HHHHCTT-----CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             HHhcCCC-----CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence            1111111     244667899999999988543  346644 5544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.57  E-value=1.5e-13  Score=114.24  Aligned_cols=214  Identities=16%  Similarity=0.145  Sum_probs=131.3

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-ch-hhcCCCCCCCcEEEEEccCCCch----HHHHH-------
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SH-LFALPGAGDANLRVFEADVLDSG----AVSRA-------   77 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~-~~~~~~~~~~~~~~~~~Dl~~~~----~~~~~-------   77 (331)
                      ..|||||++.||..++++|+++|+ +|++.+|+..+. .. ..++....+.....+..|..+..    .+.++       
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            679999999999999999999999 999999886542 11 11111111226677777775432    23222       


Q ss_pred             hcCccEEEEcccCCCCCCCCC---------------chhhhhHHHHHHHHHHHHHHHhC---------CCCEEEEeCccc
Q 020110           78 VEGCKGVFHVASPCTLEDPVD---------------PEKELILPAVQGTLNVLEAAKRF---------GVRRVVVTSSIS  133 (331)
Q Consensus        78 ~~~~d~vih~a~~~~~~~~~~---------------~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~  133 (331)
                      +..+|++||+||.........               .....+..|..............         ....++.+|+..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            235899999999765422110               01233444544444444443322         122455666543


Q ss_pred             eeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHH
Q 020110          134 AIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVL  210 (331)
Q Consensus       134 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~  210 (331)
                      ...+.++.                    ..|+.+|...+.+.+.++.+   +|+++..+.||.+..+...+     ....
T Consensus       162 ~~~~~~~~--------------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-----~~~~  216 (266)
T d1mxha_         162 TDLPLPGF--------------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-----QETQ  216 (266)
T ss_dssp             GGSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-----HHHH
T ss_pred             ccccCcch--------------------hhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-----HHHH
Confidence            32222221                    37999999999999888755   58999999999987764322     1233


Q ss_pred             HHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 020110          211 QQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (331)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~~--~~~g~-~~~~~  255 (331)
                      ..+...-+.     .+-+...+|+|.++++++...  ...|. +.+.|
T Consensus       217 ~~~~~~~pl-----~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDG  259 (266)
T d1mxha_         217 EEYRRKVPL-----GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDG  259 (266)
T ss_dssp             HHHHTTCTT-----TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhcCCC-----CCCCCCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence            333333221     133467999999999999754  35674 44444

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.55  E-value=5.1e-13  Score=112.80  Aligned_cols=220  Identities=13%  Similarity=0.073  Sum_probs=134.0

Q ss_pred             cCCCeEEEeCcch--HHHHHHHHHHHHCCCCEEEEEecCCCcc-------------chhhcCCCCCCCcE-EEEEcc--C
Q 020110            7 KEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDS-------------SHLFALPGAGDANL-RVFEAD--V   68 (331)
Q Consensus         7 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~-------------~~~~~~~~~~~~~~-~~~~~D--l   68 (331)
                      .+.|++|||||+|  -||..+++.|+++|+ +|++..|++...             ..........  +. .....|  +
T Consensus         6 L~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   82 (297)
T d1d7oa_           6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLM--EIKKVYPLDAVF   82 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBC--CEEEEEEECTTC
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhh--hhhhhhhhhhhc
Confidence            4578999999987  899999999999999 999888743110             0000000000  11 122222  2


Q ss_pred             ------------------CCchHHHHH-------hcCccEEEEcccCCCC------CCCCCchhhhhHHHHHHHHHHHHH
Q 020110           69 ------------------LDSGAVSRA-------VEGCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEA  117 (331)
Q Consensus        69 ------------------~~~~~~~~~-------~~~~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~  117 (331)
                                        .+...++++       +..+|++||+||....      +...+++...+++|+.+...+.++
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~  162 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence                              222222222       3468999999986432      122334577899999999999998


Q ss_pred             HHhCCC--CEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHH----HHcCCeEEEEcC
Q 020110          118 AKRFGV--RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA----EKHGVDVVAIHP  191 (331)
Q Consensus       118 ~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~----~~~~~~~~~lR~  191 (331)
                      +.....  +..+.+++.+.......                   ....|..+|...+.+.+.++    .++++++..+.|
T Consensus       163 ~~~~~~~~g~~~~~~~~~~~~~~~~-------------------~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~P  223 (297)
T d1d7oa_         163 FLPIMNPGGASISLTYIASERIIPG-------------------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISA  223 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCCTT-------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHhhcCCcceeeeehhhcccccc-------------------cccceecccccccccccccchhccccceEEeccccc
Confidence            865521  23555555433211111                   11369999988877766543    346899999999


Q ss_pred             CcccCCCCCCCCChhHHHHHHHHcCCCCccCcCCCCceeHHHHHHHHHHhhcC--CCCCceE-EEec
Q 020110          192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES--PAASGRY-LCTN  255 (331)
Q Consensus       192 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~l~~--~~~~g~~-~~~~  255 (331)
                      |.+..+..... ..............|.      ..+...+|+|.++++++..  ....|.. .+.|
T Consensus       224 G~i~T~~~~~~-~~~~~~~~~~~~~~Pl------gR~~~peevA~~v~fL~S~~a~~itGq~i~vDG  283 (297)
T d1d7oa_         224 GPLGSRAAKAI-GFIDTMIEYSYNNAPI------QKTLTADEVGNAAAFLVSPLASAITGATIYVDN  283 (297)
T ss_dssp             CCCBCCCSSCC-SHHHHHHHHHHHHSSS------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             ccccchhhhhc-cCCHHHHHHHHhCCCC------CCCCCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence            99988875432 2223333333333222      2367899999999998854  3356754 4443

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.48  E-value=2.5e-12  Score=106.16  Aligned_cols=220  Identities=16%  Similarity=0.110  Sum_probs=123.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh--------cC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--------EG   80 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------~~   80 (331)
                      ||.||||||++.||++++++|.++|+ +|++.+|+..+                 ...|+.+.+......        ..
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            77899999999999999999999999 99999886542                 235676665444322        24


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHH----HhCCCCEEEEeCccceeccCCCCCCcccc-CC-CCCCh
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD-ET-SWTDL  154 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~-E~-~~~~~  154 (331)
                      +|+++|+|+....   .........+|..+...+.+..    .+........+++....+........... .. .....
T Consensus        63 id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i  139 (257)
T d1fjha_          63 MDGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKA  139 (257)
T ss_dssp             CSEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHH
T ss_pred             CcEEEEcCCCCCc---HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEE
Confidence            7999999986543   3334556677777766665543    33344556665654222111100000000 00 00000


Q ss_pred             hh------hhccCcchhHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCCCCCCChhHHHHHHHHcCCCCccCcCC
Q 020110          155 EY------CKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (331)
Q Consensus       155 ~~------~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (331)
                      ..      .......|+.+|...+.+.+.++.+   +|+++..+.||.+-.+....... ............ .    ..
T Consensus       140 ~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~-~----Pl  213 (257)
T d1fjha_         140 RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ-DPRYGESIAKFV-P----PM  213 (257)
T ss_dssp             HHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CC-C----ST
T ss_pred             eeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcC-CHHHHHHHHhcC-C----CC
Confidence            00      0000125999999999999887644   58999999999998775332111 001111111110 0    12


Q ss_pred             CCceeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 020110          226 LGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (331)
Q Consensus       226 ~~~v~v~D~a~a~~~~l~~~--~~~g~~-~~~~  255 (331)
                      .-+...+|+|.++.+++...  ...|.. .+.|
T Consensus       214 gR~g~p~eva~~v~fL~S~~s~~itG~~i~vDG  246 (257)
T d1fjha_         214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDG  246 (257)
T ss_dssp             TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCccCceEEeCC
Confidence            33567899999999988543  356754 4444

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.47  E-value=2.3e-12  Score=110.08  Aligned_cols=168  Identities=10%  Similarity=0.063  Sum_probs=110.5

Q ss_pred             CCeEEEeC--cchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh------------cCCCCCCCcEEEEEc--------
Q 020110            9 EETVCVTG--ANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF------------ALPGAGDANLRVFEA--------   66 (331)
Q Consensus         9 ~~~vlVtG--atG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~------------~~~~~~~~~~~~~~~--------   66 (331)
                      .|.+||||  ++.-||..+++.|.++|. +|++..++........            ..............+        
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            46899999  557999999999999999 9988766432111100            000000001222222        


Q ss_pred             ------------cCCCchHHHHHh-------cCccEEEEcccCCCC------CCCCCchhhhhHHHHHHHHHHHHHHHhC
Q 020110           67 ------------DVLDSGAVSRAV-------EGCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF  121 (331)
Q Consensus        67 ------------Dl~~~~~~~~~~-------~~~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~  121 (331)
                                  |+.+.+++++++       .++|++||+|+....      +...+++...+++|+.++..+.+++...
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                        455555444443       368999999986542      1223446778999999999998888665


Q ss_pred             --CCCEEEEeCccceeccCCCCCCccccCCCCCChhhhhccCcchhHHHHHHHHHHHHHHH----HcCCeEEEEcCCccc
Q 020110          122 --GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAE----KHGVDVVAIHPATCL  195 (331)
Q Consensus       122 --~~~~~v~~SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~----~~~~~~~~lR~~~v~  195 (331)
                        .-.++|.+||.....+.++.                   ...|+.+|...+.+.+.++.    ++||++..+.||.+-
T Consensus       161 m~~~GsIv~iss~~~~~~~p~y-------------------~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~  221 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKVVPGY-------------------GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTC-------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             cccccccccceeehhccccccc-------------------chhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence              23578988886543322210                   12699999999988887764    358999999999886


Q ss_pred             C
Q 020110          196 G  196 (331)
Q Consensus       196 G  196 (331)
                      .
T Consensus       222 T  222 (329)
T d1uh5a_         222 S  222 (329)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.30  E-value=1.4e-13  Score=108.37  Aligned_cols=85  Identities=14%  Similarity=0.075  Sum_probs=68.3

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      +.+.|+|+||||+|.||+.+++.|.++|+ +|+++.|+........+...... ++....+|+++.+++++++.++|+||
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHhcCcCeee
Confidence            44678999999999999999999999999 99999998755443332111111 45678899999999999999999999


Q ss_pred             EcccCCC
Q 020110           86 HVASPCT   92 (331)
Q Consensus        86 h~a~~~~   92 (331)
                      |+|+...
T Consensus        98 n~Ag~g~  104 (191)
T d1luaa1          98 TAGAIGL  104 (191)
T ss_dssp             ECCCTTC
T ss_pred             ecCcccc
Confidence            9998643

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.67  E-value=6.3e-08  Score=70.44  Aligned_cols=95  Identities=18%  Similarity=0.187  Sum_probs=71.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~a   88 (331)
                      |+|+|+|+ |.+|+.+++.|.+.|+ +|+++++++.....+.+..     ++.++.||.++++.+.++ ++++|+++-+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            58999998 9999999999999999 9999998876655544321     567899999999998877 57799988642


Q ss_pred             cCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Q 020110           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (331)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (331)
                      .         +.    +.|...    ...++..+.+++|.
T Consensus        74 ~---------~d----~~N~~~----~~~~k~~~~~~iI~   96 (132)
T d1lssa_          74 G---------KE----EVNLMS----SLLAKSYGINKTIA   96 (132)
T ss_dssp             S---------CH----HHHHHH----HHHHHHTTCCCEEE
T ss_pred             C---------cH----HHHHHH----HHHHHHcCCceEEE
Confidence            2         11    344432    33456677777664

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.55  E-value=2.8e-07  Score=67.60  Aligned_cols=115  Identities=16%  Similarity=0.130  Sum_probs=79.9

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      ||.|+||+|.+|++++..|..+|. +++..++.++.+...+ .+....  .......-+ ...+..+.++++|+||..||
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~-Dl~~~~--~~~~~~~~~-~~~~~~~~~~~aDivVitag   77 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA-DLSHIE--TRATVKGYL-GPEQLPDCLKGCDVVVIPAG   77 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH-HHTTSS--SSCEEEEEE-SGGGHHHHHTTCSEEEECCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH-HHhhhh--hhcCCCeEE-cCCChHHHhCCCCEEEECCC
Confidence            799999999999999999988884 6888888765332222 221110  011111111 24456677899999999998


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      ....  ......+.++.|+...+.+++.+.+++.+.+|.+.|
T Consensus        78 ~~~~--~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          78 VPRK--PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             cCCC--CCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            6433  233467889999999999999999997766666554

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.34  E-value=3.7e-07  Score=66.42  Aligned_cols=71  Identities=14%  Similarity=0.119  Sum_probs=58.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~a   88 (331)
                      |+++|.|+ |-+|+++++.|.+.|+ +|++++.++.....+...      ...++.+|.++++.+.++ ++++|.||-+.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~------~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASY------ATHAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTT------CSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHh------CCcceeeecccchhhhccCCccccEEEEEc
Confidence            57899987 9999999999999999 999998877665555433      567788999999998877 67899887543

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.29  E-value=4e-06  Score=61.65  Aligned_cols=117  Identities=15%  Similarity=0.159  Sum_probs=78.0

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch----hhcCCCCCCCcEEEEEccCCCchHHHHHh
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAV   78 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   78 (331)
                      |++.+.+||.|+|+ |.+|++++..|+.+|. .++..+++++.....    +..........+.+...|.       +.+
T Consensus         1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l   72 (148)
T d1ldna1           1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDC   72 (148)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGT
T ss_pred             CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHh
Confidence            44445679999997 9999999999999874 479988876543111    1110011111344444544       347


Q ss_pred             cCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           79 EGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        79 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      +++|+||..|+....  ......+....|......+.+...+++.+.++.+-
T Consensus        73 ~daDvvvitag~~~~--~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivv  122 (148)
T d1ldna1          73 RDADLVVICAGANQK--PGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (148)
T ss_dssp             TTCSEEEECCSCCCC--TTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             ccceeEEEecccccc--cCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Confidence            789999999986543  23345778899999999999998888655544433

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.27  E-value=5.8e-06  Score=60.36  Aligned_cols=113  Identities=11%  Similarity=0.090  Sum_probs=74.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccc------hhhcC-CCCCCCcEEEEEccCCCchHHHHHhcCc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS------HLFAL-PGAGDANLRVFEADVLDSGAVSRAVEGC   81 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~------~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (331)
                      |||.|+||+|.+|+.++..|..++. .++..+++++....      .+... ..... +.+....--.+.    +.++++
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~-~~~~~~~~~~d~----~~l~~a   75 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRS-DANIYVESDENL----RIIDES   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCC-CCEEEEEETTCG----GGGTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhccccccc-CCccccCCcchH----HHhccc
Confidence            4899999999999999999998883 48888887643211      11110 11111 222221111122    356789


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEe
Q 020110           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT  129 (331)
Q Consensus        82 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  129 (331)
                      |+||-+||....  ......+.++.|..-.+.+++...+++.+.++.+
T Consensus        76 DvVVitAG~~~~--~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          76 DVVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             SEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             eEEEEecccccC--CCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            999999986432  2334678899999999999999988865555444

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.25  E-value=1.1e-06  Score=67.11  Aligned_cols=74  Identities=19%  Similarity=0.191  Sum_probs=58.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      .|+|+|.|| |++|+++++.|.++|+ +|++.+|+......+.....    .......+..+.......+...|.++.+.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQ----HSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCT----TEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhccc----ccccccccccchhhhHhhhhccceeEeec
Confidence            379999997 9999999999999999 99999998877666655332    45555566666677778888889888654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.21  E-value=1e-05  Score=59.05  Aligned_cols=114  Identities=18%  Similarity=0.101  Sum_probs=72.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHH-CC-CCEEEEEecCCCccchhhcCCCC-CCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLD-NN-YTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~-~g-~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |||.|+|++|.+|++++-.|.. .+ ..++..++..+........+... .......+    ...... +.++++|+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~----~~~~~~-~~~~~aDvvvi   75 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF----SGEDAT-PALEGADVVLI   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE----CSSCCH-HHHTTCSEEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEE----EcCCCc-cccCCCCEEEE
Confidence            4899999999999999988754 34 23888887654321111111110 00022222    112223 35789999999


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      +||....  ......+.++.|....+.+.+.+.+++.+.+|.+-
T Consensus        76 taG~~~k--~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivv  117 (145)
T d2cmda1          76 SAGVRRK--PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII  117 (145)
T ss_dssp             CCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CCCccCC--CCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEc
Confidence            9987543  23346788999999999999999888665544433

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.19  E-value=5.7e-06  Score=60.54  Aligned_cols=112  Identities=8%  Similarity=0.104  Sum_probs=72.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch----hhcCCCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      .|||.|+|+ |++|+.++..|+.+|. .+|+.+++++.....    +........ ......+|.       +.+.++|+
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~-~~~~~~~d~-------~~~~~adi   75 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTA-PKKIYSGEY-------SDCKDADL   75 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSC-CCEEEECCG-------GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccC-CceEeeccH-------HHhccccE
Confidence            459999996 9999999999999882 489999886532111    100000011 334445554       23678999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      ||.+|+.....  .....+....|+.....+.+...+.+.+.++.+-|
T Consensus        76 vvitag~~~~~--g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          76 VVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            99999865432  23356788999999999999999998776666554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.15  E-value=3.7e-06  Score=62.25  Aligned_cols=122  Identities=12%  Similarity=0.094  Sum_probs=78.1

Q ss_pred             cccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhh-cCCC---CCCCcEEEEEccCCCchHHHHHh
Q 020110            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG---AGDANLRVFEADVLDSGAVSRAV   78 (331)
Q Consensus         3 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~---~~~~~~~~~~~Dl~~~~~~~~~~   78 (331)
                      +|+.+ .+||.|+|+ |.+|+.++..|...+..++..++.++....... .+..   ..+......     .....+..+
T Consensus         2 ~~~~k-~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-----~~~~~~~~~   74 (154)
T d1pzga1           2 ALVQR-RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-----AEYSYEAAL   74 (154)
T ss_dssp             CCCSC-CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-----EECSHHHHH
T ss_pred             ccccC-CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-----ccCchhhhh
Confidence            44433 469999997 999999998888888658888877654321111 1000   000001111     112345678


Q ss_pred             cCccEEEEcccCCCCCCC---CCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           79 EGCKGVFHVASPCTLEDP---VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        79 ~~~d~vih~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      +++|+|+-.++.......   .....+.++.|......+++.+.+.+.+-++.+-|
T Consensus        75 ~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          75 TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             cCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            899999999986543111   12357789999999999999999887776666554

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.15  E-value=6.6e-06  Score=60.07  Aligned_cols=95  Identities=12%  Similarity=0.066  Sum_probs=56.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-C--CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN-Y--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g-~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      ||||.|.||||++|+.+++.|+++. +  .+++++.++............      .....++.+.+    .+.++|++|
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~------~~~~~~~~~~~----~~~~~DivF   70 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGT------TGTLQDAFDLE----ALKALDIIV   70 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTC------CCBCEETTCHH----HHHTCSEEE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCC------ceeeecccchh----hhhcCcEEE
Confidence            7899999999999999999888763 2  367777655443322221110      11112232322    357899999


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCE-EEEeCc
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTSS  131 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~SS  131 (331)
                      .+++-                  .....+...+.+.|.+. +|=.||
T Consensus        71 ~a~~~------------------~~s~~~~~~~~~~g~~~~VID~Ss   99 (146)
T d1t4ba1          71 TCQGG------------------DYTNEIYPKLRESGWQGYWIDAAS   99 (146)
T ss_dssp             ECSCH------------------HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EecCc------------------hHHHHhhHHHHhcCCCeecccCCc
Confidence            87642                  12445666676777653 444444

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.97  E-value=5.4e-05  Score=54.75  Aligned_cols=110  Identities=15%  Similarity=0.110  Sum_probs=74.6

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCc--c-chhhcCC---CCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSD--S-SHLFALP---GAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~--~-~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      ||.|+||+|.+|++++..|..++. .++..++.+...  . .....+.   .... ..+...+|.   +    .+.++|+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~-~~~i~~~~~---~----~~~~aDi   73 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDS-NTRVRQGGY---E----DTAGSDV   73 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTC-CCEEEECCG---G----GGTTCSE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccC-CceEeeCCH---H----HhhhcCE
Confidence            799999999999999999999984 478887753221  1 0111110   0111 344444543   2    3578999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      ||-.||....  ...+..+.++.|..-.+.+.+...+.+.+.++.+-
T Consensus        74 VvitaG~~~~--~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivv  118 (142)
T d1o6za1          74 VVITAGIPRQ--PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTT  118 (142)
T ss_dssp             EEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEC
T ss_pred             EEEecccccc--cCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence            9999986432  23456889999999999999999988766555433

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.94  E-value=2.8e-05  Score=57.36  Aligned_cols=43  Identities=14%  Similarity=0.245  Sum_probs=37.7

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH   49 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~   49 (331)
                      +.+|++|.|+||.|.+|+.+++.|.++|| +|.+.+|+......
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~   48 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAE   48 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHH
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccc
Confidence            45688999999999999999999999999 99999987755433

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.93  E-value=8.8e-05  Score=53.76  Aligned_cols=111  Identities=15%  Similarity=0.192  Sum_probs=71.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccc-hhhcCCC---CCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS-HLFALPG---AGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~-~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      +||.|+|+ |.+|+.++-.|+.++. +++..+++++.... ....+..   ... ......+|.       +.++++|+|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~-~~~~~~~~~-------~~~~~adiv   72 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMG-QMSLYAGDY-------SDVKDCDVI   72 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTT-CEEEC--CG-------GGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCC-CeeEeeCcH-------HHhCCCceE
Confidence            47999997 9999999999999873 48999987765422 1111111   111 333333322       347789999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      |-.|+....  ......+..+.|..-...+++.+.+++.+-++.+-|
T Consensus        73 vitag~~~~--~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          73 VVTAGANRK--PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             EECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEecccccC--cCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            999986543  234467889999999999999998887665544443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.83  E-value=4.4e-06  Score=64.75  Aligned_cols=40  Identities=18%  Similarity=0.109  Sum_probs=34.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~   50 (331)
                      |||.|+||+|.+|++|++.|.++|| +|++.+|++.+.+.+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            4799999999999999999999999 999999987654443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.80  E-value=6e-05  Score=54.91  Aligned_cols=114  Identities=14%  Similarity=0.093  Sum_probs=72.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchh-hcCC---CCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHL-FALP---GAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~-~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      |||.|+|+ |.+|+.++..|+.+| ..++..+++++...... ..+.   ............|.       +.++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH-------HHhccccEE
Confidence            68999995 999999999999887 34888888764431110 0000   00000233333443       246789999


Q ss_pred             EEcccCCCCC--CCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           85 FHVASPCTLE--DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        85 ih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      |-.||.....  .......+..+.|......+.+..++.+.+.++.+-|
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            9999864321  1122245678899999999999999887666665554

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.79  E-value=8e-05  Score=51.36  Aligned_cols=69  Identities=17%  Similarity=0.134  Sum_probs=54.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   85 (331)
                      ...||.|.|| |.+|+.++....+.|+ +|++++.++......  .      --+++.+|+.|.+.+.++..  ++|+|-
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~-~v~v~d~~~~~PA~~--v------a~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGV-EVIAVDRYADAPAMH--V------AHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTC-EEEEEESSTTCGGGG--G------SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCC-EEEEEcCCCCCchhh--c------CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            4568999997 9999999999999999 999998765543321  1      23578899999999988774  579886


Q ss_pred             E
Q 020110           86 H   86 (331)
Q Consensus        86 h   86 (331)
                      .
T Consensus        80 ~   80 (111)
T d1kjqa2          80 P   80 (111)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.78  E-value=1.1e-05  Score=58.91  Aligned_cols=113  Identities=13%  Similarity=0.086  Sum_probs=74.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhh-cCCCC---CCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLF-ALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      |||.|+|+ |.+|++++..|...+. .++..+++++....... .+...   .....++...  .+.    +.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeEE
Confidence            48999996 9999999999999883 48999987765422111 11000   0002223221  112    346889999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      |-+||....  ......+..+.|..-.+.+.+.+.+++.+-++.+-|
T Consensus        74 vitag~~~~--~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          74 IITAGLPRK--PGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEecCCC--CCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            999986443  233467889999999999999998887655555443

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.76  E-value=2.6e-05  Score=58.84  Aligned_cols=74  Identities=22%  Similarity=0.134  Sum_probs=53.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ...+|||+||+|-+|...++.+...|. +|+++++++...+..+++      ++..+ .|..+.........++|+||.+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~l------Ga~~~-i~~~~~~~~~~~~~g~D~v~d~   98 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLAL------GAEEA-ATYAEVPERAKAWGGLDLVLEV   98 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHT------TCSEE-EEGGGHHHHHHHTTSEEEEEEC
T ss_pred             CCCEEEEEeccccchhhhhhhhccccc-cccccccccccccccccc------cccee-eehhhhhhhhhccccccccccc
Confidence            356899999999999999999999999 999999887766666665      22222 2443322222334679999997


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      .|
T Consensus        99 ~G  100 (171)
T d1iz0a2          99 RG  100 (171)
T ss_dssp             SC
T ss_pred             cc
Confidence            65

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.76  E-value=0.00023  Score=51.39  Aligned_cols=109  Identities=15%  Similarity=0.049  Sum_probs=74.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccch----h---hcCCCCCCCcEEEEE-ccCCCchHHHHHhcC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSH----L---FALPGAGDANLRVFE-ADVLDSGAVSRAVEG   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~----~---~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~~   80 (331)
                      |||.|+|+ |.+|++++..|..+| .+++..+++++.....    +   ......   ..+... .|.       +.+.+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~---~~~i~~~~d~-------~~~~~   69 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK---YPKIVGGADY-------SLLKG   69 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTC---CCEEEEESCG-------GGGTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCC---CCccccCCCH-------HHhcc
Confidence            48999996 999999999998887 3589988876543211    0   011110   222222 233       35778


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      +|+||-.|+....  ......+..+.|..-...+.+...+.+.+.++.+-|
T Consensus        70 adiVvitag~~~~--~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          70 SEIIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             CSEEEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             ccEEEEeccccCC--CCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            9999999885443  234468889999999999999999887666665554

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.70  E-value=0.00024  Score=51.36  Aligned_cols=110  Identities=14%  Similarity=0.096  Sum_probs=73.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccch----hhcCCCCCCCcEEEEE-ccCCCchHHHHHhcCccEE
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFE-ADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~~~d~v   84 (331)
                      ||.|+|+ |.+|++++..|..+|. .++..+++++.....    +.......+ ...... .|.       +.++++|+|
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~-~~~i~~~~~~-------~~~~daDvV   73 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYP-TVSIDGSDDP-------EICRDADMV   73 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGST-TCEEEEESCG-------GGGTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCC-CceeecCCCH-------HHhhCCcEE
Confidence            7999997 9999999999999884 588988876533211    111100011 222222 222       246789999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      |-.||....  ......+.+..|..-.+.+...+.+.+.+.++.+-|
T Consensus        74 VitaG~~~~--~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          74 VITAGPRQK--PGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             EECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEecccccC--CCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999986543  234457889999999999999998887655554443

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.70  E-value=0.00018  Score=52.13  Aligned_cols=95  Identities=14%  Similarity=0.147  Sum_probs=54.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-C--CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN-Y--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g-~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |||.|.||||++|+.|++.|++.. |  -++..+..+...-... ....    +. ....+..+.    ..++++|+||.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~-~~~~----~~-~~~~~~~~~----~~~~~~DvvF~   70 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP-NFGK----DA-GMLHDAFDI----ESLKQLDAVIT   70 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC-CSSS----CC-CBCEETTCH----HHHTTCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc-ccCC----cc-eeeecccch----hhhccccEEEE
Confidence            489999999999999999988753 3  1555554433222211 1110    10 011112221    34578999998


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC-EEEEeCcc
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSI  132 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~  132 (331)
                      +..-          .        .+..+...+.+.+.+ .+|=.||.
T Consensus        71 alp~----------~--------~s~~~~~~l~~~g~~~~VIDlSsd   99 (147)
T d1mb4a1          71 CQGG----------S--------YTEKVYPALRQAGWKGYWIDAAST   99 (147)
T ss_dssp             CSCH----------H--------HHHHHHHHHHHTTCCSEEEESSST
T ss_pred             ecCc----------h--------HHHHHhHHHHHcCCceEEEeCCcc
Confidence            7632          1        244566777777765 46666764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.69  E-value=0.00021  Score=51.61  Aligned_cols=111  Identities=12%  Similarity=0.169  Sum_probs=74.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchh-hcC---CCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL-FAL---PGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~-~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      |||.|+|+ |.+|+.++..|+.++. .++..+++++...... ..+   ..... ......+|.       +.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~-~~~~~~~~~-------~~~~~adiv   71 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTR-RANIYAGDY-------ADLKGSDVV   71 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSC-CCEEEECCG-------GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccc-cccccCCcH-------HHhcCCCEE
Confidence            48999997 9999999998888873 4888888764321110 000   00011 233333332       246789999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      |-+|+....  ......+.+..|..-.+.+.+...+.+.+.++.+-|
T Consensus        72 vitag~~~~--~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          72 IVAAGVPQK--PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             EECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEecccccC--CCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            999986543  233457788999999999999998887666666554

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.67  E-value=0.0004  Score=51.05  Aligned_cols=112  Identities=12%  Similarity=0.107  Sum_probs=74.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccc-hhhcC---CCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS-HLFAL---PGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~-~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      .+||.|+|+ |.+|+.++..|..+|. .++..+++++.... ....+   ............+|.       +.+.++|+
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~~~adi   91 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVTANSKI   91 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGGTTCSE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch-------hhcccccE
Confidence            359999996 9999999999999984 58888887543321 11111   000110222222333       23678999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      ||..||....  ......+..+.|+...+.++....+.+.+-++.+-
T Consensus        92 VVitAg~~~~--~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivv  136 (160)
T d1i0za1          92 VVVTAGVRQQ--EGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVV  136 (160)
T ss_dssp             EEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EEEecCCccc--cCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence            9999997543  23446788999999999999999888766554433

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.66  E-value=2.5e-05  Score=57.97  Aligned_cols=74  Identities=16%  Similarity=0.139  Sum_probs=55.1

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      +.++++|||+|+ |-+|+.+++.|...|..+|++..|+......+....     +.+.     ...+++.+.+.++|+||
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~~~-----~~~~~~~~~l~~~Divi   89 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGEA-----VRFDELVDHLARSDVVV   89 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCEE-----CCGGGHHHHHHTCSEEE
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hccc-----ccchhHHHHhccCCEEE
Confidence            346789999998 999999999999999757998888765544433321     2222     23457778889999999


Q ss_pred             EcccC
Q 020110           86 HVASP   90 (331)
Q Consensus        86 h~a~~   90 (331)
                      .+.+.
T Consensus        90 ~atss   94 (159)
T d1gpja2          90 SATAA   94 (159)
T ss_dssp             ECCSS
T ss_pred             EecCC
Confidence            98764

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=8.4e-06  Score=61.24  Aligned_cols=72  Identities=8%  Similarity=0.036  Sum_probs=47.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      |||+|+|+ |.+|+.++..|.+.|+ +|+++.|++.............  ..........    ....+..+|+||.+.-
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~D~iii~vk   72 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDG--SIFNESLTAN----DPDFLATSDLLLVTLK   72 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTS--CEEEEEEEES----CHHHHHTCSEEEECSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCc--cccccccccc----hhhhhcccceEEEeec
Confidence            58999998 9999999999999999 9999999876544333221111  1111111111    1234567999998653

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.63  E-value=0.00024  Score=52.32  Aligned_cols=112  Identities=13%  Similarity=0.032  Sum_probs=72.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccc----hhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS----HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      ..||.|+|+ |.+|++++..|..+|. +++..++++.....    .+.......+........|.       +.+.++|+
T Consensus        19 ~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~adi   90 (159)
T d2ldxa1          19 RCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSANSKL   90 (159)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTTEEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhccccE
Confidence            357999996 9999999999999884 47888887643211    11111111110222223333       24578999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      ||-.|+.....  .....+.++.|....+.+.....+.+.+-++.+-
T Consensus        91 vvitag~~~~~--~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivv  135 (159)
T d2ldxa1          91 VIITAGARMVS--GQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVV  135 (159)
T ss_dssp             EEECCSCCCCT--TTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEEC
T ss_pred             EEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEe
Confidence            99998865432  2334677899999999998888877665554433

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.62  E-value=0.00027  Score=51.50  Aligned_cols=115  Identities=10%  Similarity=0.097  Sum_probs=74.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh-hcCCCC---CCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      +||.|+|+ |.+|++++..|...+..++..+++++...... ..+...   ...+..+...+  +.    +.++++|+||
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advvv   76 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVVI   76 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEEE
Confidence            48999996 99999999988888866888888765432211 111000   00022222211  11    3467899999


Q ss_pred             EcccCCCCCC---CCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           86 HVASPCTLED---PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        86 h~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      -+++......   ......+.++.|......+++.+++.+.+.++.+-|
T Consensus        77 itag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          77 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            9998654321   122357789999999999999999887666655544

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=5.4e-05  Score=57.16  Aligned_cols=74  Identities=15%  Similarity=0.126  Sum_probs=52.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHH---HHh--cCcc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVS---RAV--EGCK   82 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~--~~~d   82 (331)
                      ...+|||+||+|.+|...++.+...|. +|+++++++.+.....++      ++..+ .|.++.+..+   +..  +++|
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~------Ga~~v-i~~~~~~~~~~i~~~t~~~g~d   99 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQN------GAHEV-FNHREVNYIDKIKKYVGEKGID   99 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCSEE-EETTSTTHHHHHHHHHCTTCEE
T ss_pred             CCCEEEEEeccccccccccccccccCc-cccccccccccccccccc------Ccccc-cccccccHHHHhhhhhccCCce
Confidence            356899999999999999999999999 999998876555555554      22222 3555544333   332  2489


Q ss_pred             EEEEccc
Q 020110           83 GVFHVAS   89 (331)
Q Consensus        83 ~vih~a~   89 (331)
                      +|+.+.+
T Consensus       100 ~v~d~~g  106 (174)
T d1yb5a2         100 IIIEMLA  106 (174)
T ss_dssp             EEEESCH
T ss_pred             EEeeccc
Confidence            9999865

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.57  E-value=9e-05  Score=56.31  Aligned_cols=77  Identities=14%  Similarity=0.072  Sum_probs=53.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh--cCccEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--EGCKGVF   85 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~vi   85 (331)
                      +..+|||+||+|-+|+..++.....|. +|++++|++.+.+.++....    ...+..-|-...+.+.+..  .++|+|+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga----~~vi~~~~~~~~~~~~~~~~~~Gvd~v~  103 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGF----DAAFNYKTVNSLEEALKKASPDGYDCYF  103 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC----SEEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhh----hhhcccccccHHHHHHHHhhcCCCceeE
Confidence            356999999999999999999999999 99999988766666665521    1112212222223333333  3589999


Q ss_pred             Eccc
Q 020110           86 HVAS   89 (331)
Q Consensus        86 h~a~   89 (331)
                      ++.+
T Consensus       104 D~vG  107 (182)
T d1v3va2         104 DNVG  107 (182)
T ss_dssp             ESSC
T ss_pred             EecC
Confidence            9876

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=2.7e-05  Score=49.72  Aligned_cols=43  Identities=28%  Similarity=0.277  Sum_probs=37.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA   52 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~   52 (331)
                      ..+|||+||+|-+|+..++.+...|+ +|+++++++++.+.+++
T Consensus        32 ~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~   74 (77)
T d1o8ca2          32 DGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKS   74 (77)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHH
T ss_pred             CCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHH
Confidence            45899999999999999999999999 99999988776655543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.52  E-value=0.00044  Score=47.84  Aligned_cols=98  Identities=10%  Similarity=0.134  Sum_probs=64.4

Q ss_pred             ccccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccE
Q 020110            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (331)
Q Consensus         4 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   83 (331)
                      +.+.+.++|||+|| |-+|..-++.|++.|. +|+..+....+.  ...+... + ++++...+..+.     .+.+++.
T Consensus         7 ~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga-~v~v~~~~~~~~--~~~~~~~-~-~i~~~~~~~~~~-----dl~~~~l   75 (113)
T d1pjqa1           7 FCQLRDRDCLIVGG-GDVAERKARLLLEAGA-RLTVNALTFIPQ--FTVWANE-G-MLTLVEGPFDET-----LLDSCWL   75 (113)
T ss_dssp             EECCBTCEEEEECC-SHHHHHHHHHHHHTTB-EEEEEESSCCHH--HHHHHTT-T-SCEEEESSCCGG-----GGTTCSE
T ss_pred             EEEeCCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEeccCChH--HHHHHhc-C-CceeeccCCCHH-----HhCCCcE
Confidence            33556789999998 9999999999999999 999886544332  2222111 1 677777666532     3567788


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        84 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      |+-+.+.         ..        ....+.+.|++.++  +|++..
T Consensus        76 v~~at~d---------~~--------~n~~i~~~a~~~~i--lVNv~D  104 (113)
T d1pjqa1          76 AIAATDD---------DT--------VNQRVSDAAESRRI--FCNVVD  104 (113)
T ss_dssp             EEECCSC---------HH--------HHHHHHHHHHHTTC--EEEETT
T ss_pred             EeecCCC---------HH--------HHHHHHHHHHHcCC--EEEeCC
Confidence            7754321         11        12257778887764  788664

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.52  E-value=0.00044  Score=50.03  Aligned_cols=93  Identities=20%  Similarity=0.172  Sum_probs=52.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC--CEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ++|.|.||||++|+.|++.|.+.+|  -++..+..+...-..+...      .-.....++.+     ..+.++|+++-+
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~------~~~~~~~~~~~-----~~~~~~d~vf~a   71 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA------ESSLRVGDVDS-----FDFSSVGLAFFA   71 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET------TEEEECEEGGG-----CCGGGCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeec------cccchhccchh-----hhhccceEEEec
Confidence            5999999999999999999976553  2666655443322222111      11111122211     224568988866


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      ++.                  .....+...+.+.+. ++|-.||.
T Consensus        72 ~p~------------------~~s~~~~~~~~~~g~-~VID~Ss~   97 (144)
T d2hjsa1          72 AAA------------------EVSRAHAERARAAGC-SVIDLSGA   97 (144)
T ss_dssp             SCH------------------HHHHHHHHHHHHTTC-EEEETTCT
T ss_pred             CCc------------------chhhhhccccccCCc-eEEeechh
Confidence            532                  113345555556664 67777765

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.49  E-value=7.7e-05  Score=57.75  Aligned_cols=74  Identities=11%  Similarity=0.118  Sum_probs=49.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEc-------------cCCCchHHHH
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA-------------DVLDSGAVSR   76 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------------Dl~~~~~~~~   76 (331)
                      |||.|.|. |++|..++..|.+.|+ +|++++.++...+.+..-      ...+.+.             .+.-..++.+
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g------~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~   72 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQG------KSPIVEPGLEALLQQGRQTGRLSGTTDFKK   72 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT------CCSSCCTTHHHHHHHHHHTTCEEEESCHHH
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhccc------CCcccchhhhhhhhhhhcccccccCCCHHH
Confidence            48999975 9999999999999999 999998765444333321      0000111             1111233556


Q ss_pred             HhcCccEEEEcccCC
Q 020110           77 AVEGCKGVFHVASPC   91 (331)
Q Consensus        77 ~~~~~d~vih~a~~~   91 (331)
                      +++++|+++.|.+..
T Consensus        73 ~i~~~d~i~i~VpTP   87 (202)
T d1mv8a2          73 AVLDSDVSFICVGTP   87 (202)
T ss_dssp             HHHTCSEEEECCCCC
T ss_pred             HHhhCCEEEEecCcc
Confidence            677899999988754

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=0.0002  Score=56.06  Aligned_cols=76  Identities=11%  Similarity=0.066  Sum_probs=52.4

Q ss_pred             ccCCCeEEEeCc----------------chHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCC
Q 020110            6 EKEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL   69 (331)
Q Consensus         6 ~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~   69 (331)
                      ..++++||||+|                ||..|.+|++++...|+ +|+.+.-.......     .    ++..+...  
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga-~V~li~g~~~~~~p-----~----~~~~~~~~--   70 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGA-NVTLVSGPVSLPTP-----P----FVKRVDVM--   70 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTC-EEEEEECSCCCCCC-----T----TEEEEECC--
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCC-chhhhhcccccCcc-----c----ccccceeh--
Confidence            345679999965                79999999999999999 99988654332110     0    55555433  


Q ss_pred             CchH----HHHHhcCccEEEEcccCCCC
Q 020110           70 DSGA----VSRAVEGCKGVFHVASPCTL   93 (331)
Q Consensus        70 ~~~~----~~~~~~~~d~vih~a~~~~~   93 (331)
                      ..++    +.+.+.++|++|++|+....
T Consensus        71 t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          71 TALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             hhHHHHHHHHhhhccceeEeeeechhhh
Confidence            3333    33445679999999987553

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.48  E-value=6.5e-05  Score=54.50  Aligned_cols=112  Identities=15%  Similarity=0.159  Sum_probs=69.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch-hhcCCCC---CCCcEEEE-EccCCCchHHHHHhcCccEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGA---GDANLRVF-EADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~---~~~~~~~~-~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      +||.|+|+ |.+|+.++-.|..++..++..++.++..... ...+...   .+...++. ..|.       +.+.++|+|
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-------~~~~~advv   73 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-------ADTANSDVI   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-------HHhcCCCEE
Confidence            58999996 9999999999988885488888775543211 1111000   00011222 1232       235789999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      |-+||....  ......+.++.|....+.+++...+.+.+.++.+.|
T Consensus        74 vitag~~~~--~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          74 VVTSGAPRK--PGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             EECCSCC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EEeeeccCC--cCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            999986543  223346778999999999999998887666655544

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.48  E-value=0.00015  Score=55.06  Aligned_cols=76  Identities=18%  Similarity=0.080  Sum_probs=50.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCC---CCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |||.|+|+ |-+|..++..|.++|| +|.+++|++............   .. .............+..+.++++|+||-
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~aD~iii   78 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGP-GLAGTAHPDLLTSDIGLAVKDADVILI   78 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESS-SCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhh-hhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence            69999998 9999999999999999 999999976544443321100   00 111111111112346778899999997


Q ss_pred             cc
Q 020110           87 VA   88 (331)
Q Consensus        87 ~a   88 (331)
                      +.
T Consensus        79 ~v   80 (184)
T d1bg6a2          79 VV   80 (184)
T ss_dssp             CS
T ss_pred             EE
Confidence            64

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.47  E-value=3.3e-05  Score=57.03  Aligned_cols=106  Identities=17%  Similarity=0.032  Sum_probs=64.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC---CEEEEEe-cCC-Cccchhhc----CCCCCCCcEEEEEccCCCchHHHHHhcC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY---TSINATV-FPG-SDSSHLFA----LPGAGDANLRVFEADVLDSGAVSRAVEG   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~---~~V~~~~-r~~-~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (331)
                      +||.|+||+|++|++++..|...+.   .+.+... -.. ........    ...........+...    ....+.+++
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   80 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAFKD   80 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhccc
Confidence            4999999999999999999987652   1111111 011 11111110    000000022222222    223467899


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF  121 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  121 (331)
                      +|+||-+||....  ...+..+.+..|+.-.+.+.+.+.+.
T Consensus        81 advViitaG~~~~--pg~~r~dl~~~N~~i~~~~~~~i~k~  119 (154)
T d1y7ta1          81 ADYALLVGAAPRK--AGMERRDLLQVNGKIFTEQGRALAEV  119 (154)
T ss_dssp             CSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccEEEeecCcCCC--CCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999987543  34456788999999999999998875

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.46  E-value=6.2e-05  Score=57.29  Aligned_cols=73  Identities=18%  Similarity=0.112  Sum_probs=52.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch---HHHHHh--cCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAV--EGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~--~~~d~   83 (331)
                      ..+|||+||+|-+|...++.+...|. +|+++++++.+.+.+.+.      ++..+ .|..+++   .+.+..  +++|+
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~------Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~   97 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRL------GVEYV-GDSRSVDFADEILELTDGYGVDV   97 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTT------CCSEE-EETTCSTHHHHHHHHTTTCCEEE
T ss_pred             CCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccc------ccccc-ccCCccCHHHHHHHHhCCCCEEE
Confidence            46899999999999999999999999 999998877666655554      22222 3444443   333333  35899


Q ss_pred             EEEccc
Q 020110           84 VFHVAS   89 (331)
Q Consensus        84 vih~a~   89 (331)
                      ||.+.+
T Consensus        98 v~d~~g  103 (183)
T d1pqwa_          98 VLNSLA  103 (183)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999876

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.00054  Score=45.50  Aligned_cols=88  Identities=14%  Similarity=0.106  Sum_probs=58.3

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .+.|+|+|.|. |-.|..+++.|.++|+ +|++.+.+...... ..+..    ...+..+... .    ..+.++|.||-
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~-~v~~~D~~~~~~~~-~~~~~----~~~~~~~~~~-~----~~~~~~d~vi~   70 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGV-TPRVMDTRMTPPGL-DKLPE----AVERHTGSLN-D----EWLMAADLIVA   70 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTC-CCEEEESSSSCTTG-GGSCT----TSCEEESBCC-H----HHHHHCSEEEE
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCC-EEEEeeCCcCchhH-HHHhh----ccceeecccc-h----hhhccCCEEEE
Confidence            45689999998 8899999999999999 99999875443221 22211    3444445432 1    33567899998


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR  124 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  124 (331)
                      .-|...     +.             .+++.|++.+++
T Consensus        71 SPGi~~-----~~-------------~~~~~a~~~gi~   90 (93)
T d2jfga1          71 SPGIAL-----AH-------------PSLSAAADAGIE   90 (93)
T ss_dssp             CTTSCT-----TS-------------HHHHHHHHTTCE
T ss_pred             CCCCCC-----CC-------------HHHHHHHHcCCC
Confidence            766522     11             367777777764

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.44  E-value=0.00031  Score=52.66  Aligned_cols=114  Identities=17%  Similarity=0.056  Sum_probs=68.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC---CC---EEEEEecCCCccchhh----cCCCCCCCcEEEEEccCCCchHHHHHhc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN---YT---SINATVFPGSDSSHLF----ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g---~~---~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      .||.||||+|.||++++-.|.+.+   ..   .+..++.+... ..+.    ++..........+..    .....+.++
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~-~~l~g~~mdl~d~a~~~~~~~~~----~~~~~~~~~   99 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSF-QALEGVAMELEDSLYPLLREVSI----GIDPYEVFE   99 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGH-HHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHTT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCcccc-chhcchhhhhcccccccccCccc----cccchhhcc
Confidence            379999999999999999998742   11   33333332211 1111    000000001111111    122446789


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCC-C-EEEEeC
Q 020110           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-R-RVVVTS  130 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~v~~S  130 (331)
                      ++|+||-.+|....  ......+.++.|..-.+.+.+++.++.. . +++.+|
T Consensus       100 ~aDvVvi~ag~~rk--pg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         100 DVDWALLIGAKPRG--PGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCceEEEeeccCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            99999999987432  3445688999999999999999988632 2 344444

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.43  E-value=4.5e-05  Score=57.04  Aligned_cols=64  Identities=17%  Similarity=0.130  Sum_probs=44.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      |||.|.|. |.+|+.+++.|.++|+ +|++++|++...+...+..     .+....-+       .+.++++|+||-+
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~-----~~~~~~~~-------~~~~~~~DiIila   64 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQ-----LVDEAGQD-------LSLLQTAKIIFLC   64 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTT-----SCSEEESC-------GGGGTTCSEEEEC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhh-----ccceeeee-------ccccccccccccc
Confidence            48999986 9999999999999999 9999998865544443321     11111111       1356789998854

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=0.00014  Score=53.51  Aligned_cols=73  Identities=18%  Similarity=0.273  Sum_probs=56.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc-hhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEcc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~a   88 (331)
                      +|+|+|. |-+|+.+++.|.+.|+ +|+++..++.... ...+...   .++.++.||.++++.++++ ++++++||-+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~---~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhc---CCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            7999998 9999999999999999 9998887764322 1111111   0789999999999988765 47799998653

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.39  E-value=3.3e-05  Score=58.64  Aligned_cols=32  Identities=25%  Similarity=0.360  Sum_probs=27.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEe
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATV   41 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~   41 (331)
                      |+||.|.||||++|+.|++.|.+. .+ +|..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~-ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHM-TITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTE-EEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCC-ceEeeE
Confidence            679999999999999999999887 45 665553

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.37  E-value=5.8e-05  Score=56.72  Aligned_cols=37  Identities=22%  Similarity=0.198  Sum_probs=29.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      |+||.|.||||++|+.|++.|.+.-+-++..+..+..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~   37 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTY   37 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTT
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecccc
Confidence            6799999999999999999998764326766654433

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.37  E-value=0.00048  Score=52.13  Aligned_cols=81  Identities=15%  Similarity=0.043  Sum_probs=60.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC---CCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG---AGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      +.++|+|.|+ |..|+.++..|.+.|...+++..|++........+.+   ... .......|+.+.+.+...+.++|.|
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dii   94 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAEALASADIL   94 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhhhhccccee
Confidence            4579999998 8889999999999997689999998765443322110   000 2345568888888888888999999


Q ss_pred             EEcccC
Q 020110           85 FHVASP   90 (331)
Q Consensus        85 ih~a~~   90 (331)
                      ||+...
T Consensus        95 IN~Tp~  100 (182)
T d1vi2a1          95 TNGTKV  100 (182)
T ss_dssp             EECSST
T ss_pred             ccccCC
Confidence            999764

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.34  E-value=0.00016  Score=54.39  Aligned_cols=74  Identities=22%  Similarity=0.265  Sum_probs=51.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc-hHHHHHh--cCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAV--EGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~--~~~d~vi   85 (331)
                      ..+|||+||+|-+|+..++.+...|. +|+++.+++.+......+..    . .++  |..+. ++.....  +++|+||
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa----~-~vi--~~~~~~~~~~~~~~~~gvD~vi  103 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGA----K-EVL--AREDVMAERIRPLDKQRWAAAV  103 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTC----S-EEE--ECC---------CCSCCEEEEE
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhccc----c-eee--ecchhHHHHHHHhhccCcCEEE
Confidence            35799999999999999999999999 99999998888777776522    1 122  22221 1222222  3589999


Q ss_pred             EcccC
Q 020110           86 HVASP   90 (331)
Q Consensus        86 h~a~~   90 (331)
                      .+.+-
T Consensus       104 d~vgg  108 (176)
T d1xa0a2         104 DPVGG  108 (176)
T ss_dssp             ECSTT
T ss_pred             EcCCc
Confidence            98763

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=8.7e-05  Score=56.21  Aligned_cols=74  Identities=9%  Similarity=0.044  Sum_probs=54.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchH---HHHHhc--CccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAVE--GCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~d~   83 (331)
                      ..+|||+||+|.+|..+++.+...|. +|+++++++.+.+.++++      ++..+ .|..+++-   +.++-.  ++|+
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~l------Ga~~v-i~~~~~d~~~~v~~~t~g~g~d~  100 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA------GAWQV-INYREEDLVERLKEITGGKKVRV  100 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH------TCSEE-EETTTSCHHHHHHHHTTTCCEEE
T ss_pred             CCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhc------CCeEE-EECCCCCHHHHHHHHhCCCCeEE
Confidence            46899999999999999999999999 999999988777776665      22222 35555433   333322  4799


Q ss_pred             EEEcccC
Q 020110           84 VFHVASP   90 (331)
Q Consensus        84 vih~a~~   90 (331)
                      |+.+.+.
T Consensus       101 v~d~~g~  107 (179)
T d1qora2         101 VYDSVGR  107 (179)
T ss_dssp             EEECSCG
T ss_pred             EEeCccH
Confidence            9998763

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.28  E-value=0.00017  Score=53.88  Aligned_cols=74  Identities=11%  Similarity=0.038  Sum_probs=53.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCC-CchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-DSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~vih   86 (331)
                      ...+|+|+|+ |.+|...++.+...|. +|+++++++.+.+...++      ++..+. |.. +.+..++..+..|+++.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~l------Ga~~~i-~~~~~~~~~~~~~~~~d~vi~   97 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM------GADHYI-ATLEEGDWGEKYFDTFDLIVV   97 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH------TCSEEE-EGGGTSCHHHHSCSCEEEEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccc-cccccccchhHHHHhhcc------CCcEEe-eccchHHHHHhhhcccceEEE
Confidence            3568999997 9999999998888899 999999988776666665      222221 222 23444455567899999


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      +.+.
T Consensus        98 ~~~~  101 (168)
T d1piwa2          98 CASS  101 (168)
T ss_dssp             CCSC
T ss_pred             EecC
Confidence            8764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.22  E-value=0.0002  Score=50.95  Aligned_cols=68  Identities=12%  Similarity=0.093  Sum_probs=53.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH-hcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vih~   87 (331)
                      |+|+|+|. |-+|+.+++.|  +++ .|+++..++.........      ++.++.||.++++.++++ +++++.+|-+
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~-~i~vi~~d~~~~~~~~~~------~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~   69 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGS-EVFVLAEDENVRKKVLRS------GANFVHGDPTRVSDLEKANVRGARAVIVN   69 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGG-GEEEEESCTTHHHHHHHT------TCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCC-CCEEEEcchHHHHHHHhc------CccccccccCCHHHHHHhhhhcCcEEEEe
Confidence            57999997 88999999998  456 677777777665555443      789999999999988765 4678998854

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.16  E-value=0.0001  Score=55.58  Aligned_cols=71  Identities=23%  Similarity=0.188  Sum_probs=50.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhc--CccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~   87 (331)
                      .+|||+||+|-+|+..++.....|. +|++++|++.+...+.++      +...+ .|..+.+.. +.+.  ..|.+|++
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~l------Gad~v-i~~~~~~~~-~~l~~~~~~~vvD~  103 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSL------GASRV-LPRDEFAES-RPLEKQVWAGAIDT  103 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH------TEEEE-EEGGGSSSC-CSSCCCCEEEEEES
T ss_pred             CcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhh------ccccc-cccccHHHH-HHHHhhcCCeeEEE
Confidence            4899999999999999999999999 999999988877766665      44433 233222221 2222  25888887


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      .+
T Consensus       104 Vg  105 (177)
T d1o89a2         104 VG  105 (177)
T ss_dssp             SC
T ss_pred             cc
Confidence            64

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.15  E-value=7.5e-05  Score=55.81  Aligned_cols=43  Identities=30%  Similarity=0.311  Sum_probs=38.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~   53 (331)
                      .+|||+||+|-+|+..++.....|. +|+++++++.+.+.+.++
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~l   67 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQL   67 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHH
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhh
Confidence            4799999999999999999988999 999999988887777765

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.14  E-value=0.00031  Score=52.45  Aligned_cols=74  Identities=12%  Similarity=0.087  Sum_probs=54.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ...+|+|.|+ |-+|...++.+...|. +++++++++...+...++      +... ..|..+.+......+++|++|.+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~l------Gad~-~i~~~~~~~~~~~~~~~D~vid~  100 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL------GADE-VVNSRNADEMAAHLKSFDFILNT  100 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH------TCSE-EEETTCHHHHHTTTTCEEEEEEC
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccc-cchhhccchhHHHHHhcc------CCcE-EEECchhhHHHHhcCCCceeeee
Confidence            3468999986 8899999999999999 888888877665555554      2222 24666666555556779999999


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      .+.
T Consensus       101 ~g~  103 (168)
T d1uufa2         101 VAA  103 (168)
T ss_dssp             CSS
T ss_pred             eec
Confidence            874

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.14  E-value=0.00019  Score=53.35  Aligned_cols=65  Identities=22%  Similarity=0.292  Sum_probs=48.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |++|.|.|- |-+|+.+++.|+++|| +|.+.+|++.....+....      ..       ......+.+..+|+|+-+.
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~------~~-------~~~~~~e~~~~~diii~~v   65 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAG------AS-------AARSARDAVQGADVVISML   65 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTT------CE-------ECSSHHHHHTSCSEEEECC
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhh------cc-------ccchhhhhccccCeeeecc
Confidence            679999985 9999999999999999 9999998876655544431      11       1123556778899888765

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.09  E-value=0.0024  Score=46.58  Aligned_cols=115  Identities=17%  Similarity=0.048  Sum_probs=66.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCC------CEEEEEecCCCcc--chhhc-CCCCCCCcEEEEEccCCCchHHHHHhcC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNY------TSINATVFPGSDS--SHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEG   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~------~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (331)
                      +||.|+||+|.+|++++-.|.+.+.      .++..++.+....  ..+.. +..........+..    .....+.+++
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~   79 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA----TDKEEIAFKD   79 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE----ESCHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc----CcccccccCC
Confidence            4999999999999999999986531      0233333322111  11100 00000001222211    1123467889


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCCE-EEEeC
Q 020110           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRR-VVVTS  130 (331)
Q Consensus        81 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~-~v~~S  130 (331)
                      +|+||-.+|....  ......+.++.|..-.+.+.+...++ +-.- +|.+|
T Consensus        80 ~dvVVitag~~~~--~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          80 LDVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             CSEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ceEEEEecccCCC--CCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            9999999986553  23334677899999999999887664 4333 34444

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.00  E-value=0.0032  Score=44.35  Aligned_cols=87  Identities=16%  Similarity=0.152  Sum_probs=57.2

Q ss_pred             CCeEEEeCcc---hHHHHHHHHHHHHCC-CCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            9 EETVCVTGAN---GFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         9 ~~~vlVtGat---G~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      -++|.|+|++   |..|..+.+.|.+.| . +|+.+.  +.... ..        +... .-++.+      +-..+|.+
T Consensus         8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g-~v~pVn--P~~~~-i~--------G~~~-y~sl~d------lp~~vDlv   68 (129)
T d2csua1           8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKG-KVYPVN--IKEEE-VQ--------GVKA-YKSVKD------IPDEIDLA   68 (129)
T ss_dssp             CSEEEEETCCSCTTSHHHHHHHHHTTCCSS-EEEEEC--SSCSE-ET--------TEEC-BSSTTS------CSSCCSEE
T ss_pred             CCeEEEEccCCCCCCcHHHHHHHHHHcCCC-cEEEec--cCccc-cC--------CeEe-ecchhh------cCCCCceE
Confidence            4699999998   999999999987765 5 899884  32211 10        2221 233332      23468888


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      +-+..          +.        .+..+++.|.+.|++.++.+|+.
T Consensus        69 vi~vp----------~~--------~~~~~~~~~~~~g~~~~vi~s~G   98 (129)
T d2csua1          69 IIVVP----------KR--------FVKDTLIQCGEKGVKGVVIITAG   98 (129)
T ss_dssp             EECSC----------HH--------HHHHHHHHHHHHTCCEEEECCCS
T ss_pred             EEecC----------hH--------HhHHHHHHHHHcCCCEEEEeccc
Confidence            86532          12        24467888888899998888864

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.97  E-value=0.00084  Score=50.59  Aligned_cols=77  Identities=16%  Similarity=0.137  Sum_probs=48.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc--cchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      |+|.|.|+ |-.|+.++..|.++|+ +|+...|+...  ...+.............-..++.-.+++.++++++|.||.+
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~a   78 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG   78 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcc
Confidence            58999998 9999999999999999 99999874332  11111110000000101111223346678889999999875


Q ss_pred             c
Q 020110           88 A   88 (331)
Q Consensus        88 a   88 (331)
                      .
T Consensus        79 v   79 (180)
T d1txga2          79 V   79 (180)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.92  E-value=0.0016  Score=47.54  Aligned_cols=64  Identities=19%  Similarity=0.113  Sum_probs=44.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |||-|.|. |.+|+.+++.|+++|+ +|+..+|++.........      ++.+.       ++..++++++|.||-+.
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~------~~~~~-------~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERAR------TVGVT-------ETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHHH------HHTCE-------ECCHHHHHTSSEEEECS
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhhh------ccccc-------ccHHHHHhhcCeEEEEe
Confidence            47999975 9999999999999999 999887766544333221      11111       12345678899999764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.85  E-value=0.00037  Score=51.64  Aligned_cols=64  Identities=19%  Similarity=0.281  Sum_probs=48.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |||-|.|- |.+|+.+++.|+++|+ +|++.+|++.....+...      +...       ..+..++++++|+||-+.
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~------~~~~-------~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAA------GAET-------ASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHh------hhhh-------cccHHHHHhCCCeEEEEc
Confidence            47999985 9999999999999999 999999987766655543      2221       123456677899998764

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.83  E-value=0.0011  Score=49.41  Aligned_cols=75  Identities=13%  Similarity=0.044  Sum_probs=51.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCC--CchHHHHHh-----cCc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL--DSGAVSRAV-----EGC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~-----~~~   81 (331)
                      ..+|+|+| +|-+|...++.+...|. +|+++++++.+.+..+++..    .. .+..|-.  +...+.+.+     .++
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga----~~-~~~~~~~~~~~~~~~~~~~~~~g~g~   99 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGA----DV-TLVVDPAKEEESSIIERIRSAIGDLP   99 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC----SE-EEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCC----cE-EEeccccccccchhhhhhhcccccCC
Confidence            45899997 58999999999999999 99999988777666666521    22 2233332  223333333     358


Q ss_pred             cEEEEcccC
Q 020110           82 KGVFHVASP   90 (331)
Q Consensus        82 d~vih~a~~   90 (331)
                      |+||.+++.
T Consensus       100 D~vid~~g~  108 (170)
T d1e3ja2         100 NVTIDCSGN  108 (170)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeecCCC
Confidence            999999874

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.79  E-value=0.00021  Score=54.17  Aligned_cols=35  Identities=26%  Similarity=0.394  Sum_probs=27.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (331)
                      ..||.|.||||++|+.|++.|.+.-+-++..+..+
T Consensus         5 kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~   39 (183)
T d2cvoa1           5 EVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTAD   39 (183)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred             ccEEEEECcccHHHHHHHHHHHhCCCceEEEEecc
Confidence            45899999999999999999987643266655543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.77  E-value=0.00053  Score=51.20  Aligned_cols=43  Identities=21%  Similarity=0.319  Sum_probs=34.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCC-CEEEEEecCCCccchhhc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA   52 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~   52 (331)
                      ||+|+|.|. |.+|+.+++.|.+.|+ .+|++.+|++...+...+
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~   44 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD   44 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH
Confidence            678999985 9999999999999985 278888887665554444

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.75  E-value=0.00044  Score=50.63  Aligned_cols=65  Identities=11%  Similarity=0.039  Sum_probs=46.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |||.+.|+ |-+|+++++.|++.|+ +|++..|++.....+.+..     ++.+       ..+..++++++|+||-+.
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~-----g~~~-------~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQL-----ALPY-------AMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHH-----TCCB-------CSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhcccc-----ceee-------echhhhhhhccceeeeec
Confidence            47999985 9999999999999999 9999988766555443321     1111       123556678899888553

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.73  E-value=0.0001  Score=56.23  Aligned_cols=77  Identities=14%  Similarity=0.135  Sum_probs=49.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--C-CCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--A-GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      .|+||.|.|+ |-.|++++..|.++|| +|++..|++...+.+.....  . .+ +++. .-++.-..++.++++++|.|
T Consensus         6 ~m~KI~ViGa-G~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~-~~~l-~~~i~~t~~l~~a~~~ad~i   81 (189)
T d1n1ea2           6 YLNKAVVFGS-GAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLK-GVQL-ASNITFTSDVEKAYNGAEII   81 (189)
T ss_dssp             CEEEEEEECC-SHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTST-TCBC-CTTEEEESCHHHHHTTCSCE
T ss_pred             eeceEEEECC-CHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhccccccccc-cccc-ccccccchhhhhccCCCCEE
Confidence            3678999998 9999999999999999 99999987654433321100  0 00 1110 01111123567888999999


Q ss_pred             EEcc
Q 020110           85 FHVA   88 (331)
Q Consensus        85 ih~a   88 (331)
                      |-+.
T Consensus        82 iiav   85 (189)
T d1n1ea2          82 LFVI   85 (189)
T ss_dssp             EECS
T ss_pred             EEcC
Confidence            8754

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.72  E-value=0.0012  Score=49.11  Aligned_cols=74  Identities=14%  Similarity=0.087  Sum_probs=50.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.|+|||.|+ |..+++++..|.+.|. +|+++.|+......+.+...... .++.+  +..+.     ...++|.|||+
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~-~~~~~--~~~~~-----~~~~~dliIN~   86 (170)
T d1nyta1          17 PGLRILLIGA-GGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTG-SIQAL--SMDEL-----EGHEFDLIINA   86 (170)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGS-SEEEC--CSGGG-----TTCCCSEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcc-ccccc--ccccc-----cccccceeecc
Confidence            4679999998 8889999999999999 89999998766555443222111 23332  22211     12468999998


Q ss_pred             ccCC
Q 020110           88 ASPC   91 (331)
Q Consensus        88 a~~~   91 (331)
                      ....
T Consensus        87 Tp~G   90 (170)
T d1nyta1          87 TSSG   90 (170)
T ss_dssp             CSCG
T ss_pred             cccC
Confidence            7543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.68  E-value=0.00083  Score=50.07  Aligned_cols=74  Identities=16%  Similarity=0.142  Sum_probs=51.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcE-EEEEccCCCchHHHHHh-----cCcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDSGAVSRAV-----EGCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~-----~~~d   82 (331)
                      ..+|+|+|++|-+|...++.+...|...|++.++++......+++      +. .++  |..+.+..++..     .++|
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~------Ga~~~i--~~~~~~~~~~~~~~~~~~~~d   99 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA------GADYVI--NASMQDPLAEIRRITESKGVD   99 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH------TCSEEE--ETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHc------CCceee--ccCCcCHHHHHHHHhhcccch
Confidence            458999999999999999999888854898888877665555554      22 233  333333333322     2489


Q ss_pred             EEEEcccC
Q 020110           83 GVFHVASP   90 (331)
Q Consensus        83 ~vih~a~~   90 (331)
                      +||.+++.
T Consensus       100 ~vid~~g~  107 (170)
T d1jvba2         100 AVIDLNNS  107 (170)
T ss_dssp             EEEESCCC
T ss_pred             hhhccccc
Confidence            99998763

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.66  E-value=0.00071  Score=49.65  Aligned_cols=76  Identities=17%  Similarity=0.097  Sum_probs=58.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      -.+|+|.|+ |-.|..-++.....|. +|++++++....+.++.....   +++   .-..+.+.+.+.++++|.||..+
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~---~~~---~~~~~~~~l~~~~~~aDivI~aa  103 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAVAEADLLIGAV  103 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHHHTCSEEEECC
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcc---cce---eehhhhhhHHHhhccCcEEEEee
Confidence            358999998 9999999999999999 999999887665555443221   232   33456778899999999999988


Q ss_pred             cCCC
Q 020110           89 SPCT   92 (331)
Q Consensus        89 ~~~~   92 (331)
                      -...
T Consensus       104 lipG  107 (168)
T d1pjca1         104 LVPG  107 (168)
T ss_dssp             CCTT
T ss_pred             ecCC
Confidence            7544

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.64  E-value=0.0016  Score=49.06  Aligned_cols=75  Identities=11%  Similarity=0.044  Sum_probs=50.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcE-EEEEccCCCchHH----HHHh--cCc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDSGAV----SRAV--EGC   81 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~----~~~~--~~~   81 (331)
                      ..+|||+|+ |-+|...++.+...|..+|+++++++......+++      +. .++...-.+..+.    .+..  .++
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~l------Ga~~vi~~~~~~~~~~~~~i~~~~~~~g~  101 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI------GADLTLNRRETSVEERRKAIMDITHGRGA  101 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT------TCSEEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             CCEEEEECC-Cccchhheecccccccccccccccccccccccccc------cceEEEeccccchHHHHHHHHHhhCCCCc
Confidence            468999997 89999999999999965799998887766666655      22 2332221222222    2222  248


Q ss_pred             cEEEEcccC
Q 020110           82 KGVFHVASP   90 (331)
Q Consensus        82 d~vih~a~~   90 (331)
                      |+||.+++.
T Consensus       102 Dvvid~vG~  110 (182)
T d1vj0a2         102 DFILEATGD  110 (182)
T ss_dssp             EEEEECSSC
T ss_pred             eEEeecCCc
Confidence            999999864

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.63  E-value=0.0026  Score=40.14  Aligned_cols=36  Identities=19%  Similarity=0.247  Sum_probs=31.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (331)
                      ||+|.|.|| |.+|+.++..-.+.|+ +|.+++-++..
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~-~v~vldp~~~~   36 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGI-AVWPVGLDAEP   36 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTE-EEEEECTTSCG
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCC-EEEEEcCCCCC
Confidence            679999998 9999999999999999 99999654433

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.62  E-value=0.01  Score=43.07  Aligned_cols=31  Identities=32%  Similarity=0.495  Sum_probs=24.2

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCC--CEEEEEe
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNY--TSINATV   41 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~   41 (331)
                      ||.|.||||++|+.|++.|.+..+  .++..+.
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~   35 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA   35 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence            799999999999999998877643  2444443

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.62  E-value=0.0043  Score=46.05  Aligned_cols=75  Identities=19%  Similarity=0.116  Sum_probs=56.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccC---------------------
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV---------------------   68 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl---------------------   68 (331)
                      -+|+|.|| |-.|.+-++..+..|. +|.+++.+......++.+..      +++..+.                     
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~------~~i~~~~~~~~~~~~~~gyA~~~s~~~~  101 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGG------KFITVDDEAMKTAETAGGYAKEMGEEFR  101 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTC------EECCC-----------------------
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhc------ceEEEeccccccccccccchhhcCHHHH
Confidence            48999998 9999999999999999 99999998888777776632      2222211                     


Q ss_pred             -CCchHHHHHhcCccEEEEcccCCC
Q 020110           69 -LDSGAVSRAVEGCKGVFHVASPCT   92 (331)
Q Consensus        69 -~~~~~~~~~~~~~d~vih~a~~~~   92 (331)
                       ...+.+.+.+.++|.||-.+-...
T Consensus       102 ~~~~~~l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1         102 KKQAEAVLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             CCHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHHHHHhhhhheeeeecCC
Confidence             123456677889999998886554

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.62  E-value=0.001  Score=48.97  Aligned_cols=96  Identities=22%  Similarity=0.333  Sum_probs=55.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC-CCCEEEEE-ecCCCccc--hhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINAT-VFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~-~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   84 (331)
                      .+||.|.|++|-+|+.+++.+.+. +. ++++. +|......  ...+.......++. +.-|      ....++.+|+|
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~-~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~-~~~~------~~~~~~~~DVi   75 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGV-QLGAALEREGSSLLGSDAGELAGAGKTGVT-VQSS------LDAVKDDFDVF   75 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTE-ECCCEECCTTCTTCSCCTTCSSSSSCCSCC-EESC------STTTTTSCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecccchhccchhhhhhccccCCce-eecc------HHHHhcccceE
Confidence            358999999999999999999886 56 55544 33322111  01111111110111 1222      23456789999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        85 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      |.+.-          |.        ++..+++.|.++++ .+|. +|+
T Consensus        76 IDFs~----------p~--------~~~~~~~~a~~~~~-~~Vi-GTT  103 (162)
T d1diha1          76 IDFTR----------PE--------GTLNHLAFCRQHGK-GMVI-GTT  103 (162)
T ss_dssp             EECSC----------HH--------HHHHHHHHHHHTTC-EEEE-CCC
T ss_pred             EEecc----------HH--------HHHHHHHHHHhccc-eeEE-ecC
Confidence            98643          22        35578888888875 4665 554

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.58  E-value=0.004  Score=46.67  Aligned_cols=63  Identities=17%  Similarity=0.141  Sum_probs=48.0

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...++|.|.|. |-||+.+++.|..-|. +|++.+|.+.+..                   ....+++++++.++|+|+.
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~-~v~~~d~~~~~~~-------------------~~~~~~l~ell~~sDiv~~   98 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGA-QVRGFSRTPKEGP-------------------WRFTNSLEEALREARAAVC   98 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTC-EEEEECSSCCCSS-------------------SCCBSCSHHHHTTCSEEEE
T ss_pred             ccCceEEEecc-ccccccceeeeecccc-ccccccccccccc-------------------eeeeechhhhhhccchhhc
Confidence            34679999997 9999999999999999 9999987654311                   1112346788999999987


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      +...
T Consensus        99 ~~pl  102 (181)
T d1qp8a1          99 ALPL  102 (181)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            6644

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.0041  Score=46.12  Aligned_cols=75  Identities=16%  Similarity=0.115  Sum_probs=53.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEE-EEEccCCCchHHHHHh-----cCcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLR-VFEADVLDSGAVSRAV-----EGCK   82 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~-----~~~d   82 (331)
                      ..+|+|+|+ |.+|...++.+...|..+|++.++++......+++      ++. ++..+-.+..+..+.+     .++|
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~------Ga~~~~~~~~~~~~~~~~~~~~~~g~g~D   99 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI------GADLVLQISKESPQEIARKVEGQLGCKPE   99 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCSEEEECSSCCHHHHHHHHHHHHTSCCS
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHh------CCcccccccccccccccccccccCCCCce
Confidence            458999987 99999999999999976799998887766666555      222 3333334444444433     2589


Q ss_pred             EEEEcccC
Q 020110           83 GVFHVASP   90 (331)
Q Consensus        83 ~vih~a~~   90 (331)
                      +||.+++.
T Consensus       100 vvid~~G~  107 (171)
T d1pl8a2         100 VTIECTGA  107 (171)
T ss_dssp             EEEECSCC
T ss_pred             EEEeccCC
Confidence            99998874

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.46  E-value=0.0027  Score=44.26  Aligned_cols=35  Identities=17%  Similarity=0.213  Sum_probs=31.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      .++|+|.|| |++|-.++..|.+.|. +|+.+.+.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~-~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGV-HVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccc-eEEEEeeccc
Confidence            469999998 9999999999999999 9999988654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.43  E-value=0.003  Score=44.14  Aligned_cols=35  Identities=20%  Similarity=0.321  Sum_probs=31.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      +.++|+|.|| |++|..++..|.+.|. +|+.+.|.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccce-EEEEEEecC
Confidence            4579999998 9999999999999999 999997764

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.40  E-value=0.0039  Score=46.49  Aligned_cols=78  Identities=15%  Similarity=0.074  Sum_probs=50.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc-hHHHHHh--cCccEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAV--EGCKGV   84 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~--~~~d~v   84 (331)
                      ...+|+|.|+ |-+|...+..+...|...|++.++++.+.....+...    ...+...+-.+. ....+..  .++|++
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga----~~~i~~~~~~~~~~~~~~~~~~~G~D~v  102 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA----TECVNPQDYKKPIQEVLTEMSNGGVDFS  102 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC----SEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCC----eeEEecCCchhHHHHHHHHHhcCCCCEE
Confidence            3458999999 5589999999999985589999888877766666521    111111232221 2222222  358999


Q ss_pred             EEcccC
Q 020110           85 FHVASP   90 (331)
Q Consensus        85 ih~a~~   90 (331)
                      |.+.+.
T Consensus       103 id~~G~  108 (176)
T d2jhfa2         103 FEVIGR  108 (176)
T ss_dssp             EECSCC
T ss_pred             EecCCc
Confidence            998874

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.40  E-value=0.0015  Score=48.48  Aligned_cols=68  Identities=15%  Similarity=0.144  Sum_probs=47.4

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.++|+|.|+ |..|++++..|.+.|..+|.++.|+......+....     +...+. ++.        ..++|.|||+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~-----~~~~~~-~~~--------~~~~DliINa   80 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY-----GYAYIN-SLE--------NQQADILVNV   80 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH-----TCEEES-CCT--------TCCCSEEEEC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh-----hhhhhh-ccc--------ccchhhheec
Confidence            3578999998 999999999999999758999999876655544321     122221 111        1468999997


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ...
T Consensus        81 Tpi   83 (167)
T d1npya1          81 TSI   83 (167)
T ss_dssp             SST
T ss_pred             ccc
Confidence            654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.36  E-value=0.003  Score=43.67  Aligned_cols=34  Identities=21%  Similarity=0.308  Sum_probs=31.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      ++++|.|| |++|-.++..|.+.|. +|+.+.|.+.
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~-~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGT-KVTILEGAGE   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CeEEEECC-Cccceeeeeeeccccc-EEEEEEecce
Confidence            68999998 9999999999999999 9999987654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.34  E-value=0.0017  Score=49.12  Aligned_cols=74  Identities=15%  Similarity=0.075  Sum_probs=45.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCch---HHHHHh-cCccEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAV-EGCKGVF   85 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~-~~~d~vi   85 (331)
                      .+|||+||+|-+|+..++.+...|...|++.++++.....+....+    --.+  .|..+++   .+.+.. +++|+|+
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~g----ad~v--i~~~~~~~~~~~~~~~~~GvDvv~  105 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELG----FDAA--VNYKTGNVAEQLREACPGGVDVYF  105 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSC----CSEE--EETTSSCHHHHHHHHCTTCEEEEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhccc----ceEE--eeccchhHHHHHHHHhccCceEEE
Confidence            5799999999999999999988997345555544433333332111    1122  3444332   233333 3589999


Q ss_pred             Eccc
Q 020110           86 HVAS   89 (331)
Q Consensus        86 h~a~   89 (331)
                      .+.+
T Consensus       106 D~vG  109 (187)
T d1vj1a2         106 DNVG  109 (187)
T ss_dssp             ESSC
T ss_pred             ecCC
Confidence            9876

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.34  E-value=0.0045  Score=43.41  Aligned_cols=30  Identities=13%  Similarity=0.195  Sum_probs=26.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINAT   40 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~   40 (331)
                      |||.|.|++|-.|+.+.+.+.+.|+ ++++.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~-~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGH-ELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCC-eEEEE
Confidence            4899999999999999999999999 76654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.31  E-value=0.0024  Score=47.48  Aligned_cols=74  Identities=18%  Similarity=0.120  Sum_probs=50.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.++|+|.|+ |..++.++..|.+.+. +|+++.|+......+.+...... ++.....|-.       .+.++|.|||+
T Consensus        17 ~~k~vlIlGa-GGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~-------~~~~~diiIN~   86 (171)
T d1p77a1          17 PNQHVLILGA-GGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI-------PLQTYDLVINA   86 (171)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC-------CCSCCSEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhcc-ccchhhhccc-------cccccceeeec
Confidence            4679999997 7779999999998776 99999998765554433222111 3444444422       24578999999


Q ss_pred             ccCC
Q 020110           88 ASPC   91 (331)
Q Consensus        88 a~~~   91 (331)
                      ....
T Consensus        87 tp~g   90 (171)
T d1p77a1          87 TSAG   90 (171)
T ss_dssp             CCC-
T ss_pred             cccc
Confidence            7643

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.27  E-value=0.0021  Score=47.99  Aligned_cols=74  Identities=14%  Similarity=0.067  Sum_probs=48.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchH---HHHHhc-CccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAVE-GCKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~-~~d~v   84 (331)
                      ..+|+|.|+ |.+|...++.+...|...|++.++++.+....+++.     -.+++  |..+.+.   +.++.. ++|+|
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~G-----a~~~i--~~~~~~~~~~i~~~t~gg~D~v  100 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLG-----ATHVI--NSKTQDPVAAIKEITDGGVNFA  100 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHT-----CSEEE--ETTTSCHHHHHHHHTTSCEEEE
T ss_pred             CCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcC-----CeEEE--eCCCcCHHHHHHHHcCCCCcEE
Confidence            458999997 999999999998889746666666665555555541     12333  4444332   333322 48999


Q ss_pred             EEcccC
Q 020110           85 FHVASP   90 (331)
Q Consensus        85 ih~a~~   90 (331)
                      |.+.+.
T Consensus       101 id~~G~  106 (174)
T d1f8fa2         101 LESTGS  106 (174)
T ss_dssp             EECSCC
T ss_pred             EEcCCc
Confidence            999774

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.26  E-value=0.003  Score=43.68  Aligned_cols=35  Identities=11%  Similarity=0.193  Sum_probs=31.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      .++|+|.|| |++|-.++..|.+.|. +|+.+.|.+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~-~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGI-DSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTC-EEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccc-cceeeehhcc
Confidence            478999998 9999999999999999 9999988653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.25  E-value=0.022  Score=37.44  Aligned_cols=70  Identities=14%  Similarity=0.203  Sum_probs=46.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .+++|.+.|-.|--=+.|++.|.++|+ +|.+.++..... ..+.+.      ++.+..++-.  +    .+.++|.||.
T Consensus         7 ~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~------Gi~v~~g~~~--~----~i~~~d~vV~   73 (96)
T d1p3da1           7 RVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQA------GAKIYIGHAE--E----HIEGASVVVV   73 (96)
T ss_dssp             TCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHT------TCEEEESCCG--G----GGTTCSEEEE
T ss_pred             hCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHC------CCeEEECCcc--c----cCCCCCEEEE
Confidence            356888887633322778999999999 999998864432 333332      5665554432  2    3467899998


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      ..|.
T Consensus        74 S~AI   77 (96)
T d1p3da1          74 SSAI   77 (96)
T ss_dssp             CTTS
T ss_pred             CCCc
Confidence            8776

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.24  E-value=0.0036  Score=43.16  Aligned_cols=34  Identities=26%  Similarity=0.265  Sum_probs=31.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      ++|+|.|| |++|-.++..|.+.|. +|+.+.|.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~-~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGA-KTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhcccc-EEEEEeecch
Confidence            68999998 9999999999999999 9999988654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.22  E-value=0.0035  Score=43.67  Aligned_cols=34  Identities=15%  Similarity=0.242  Sum_probs=31.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      ++++|.|| |+||-.++..|.+.|. +|+.+.|++.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~-~Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGS-KVTVVEFQPQ   57 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCc-ceeEEEeccc
Confidence            68999998 9999999999999999 9999987654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.20  E-value=0.0041  Score=46.39  Aligned_cols=73  Identities=11%  Similarity=0.180  Sum_probs=53.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      +.+|-|.|- |.+|+.+++.|+++|+ +|++.+|++.+...+.+...... ..   . .....+++...+..+|.++-+.
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~-~~---~-~a~~~~~~~~~~~~~~~ii~~~   74 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEAKGT-KV---L-GAHSLEEMVSKLKKPRRIILLV   74 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTTTTS-SC---E-ECSSHHHHHHHBCSSCEEEECS
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhccccc-cc---c-chhhhhhhhhhhcccceEEEec
Confidence            358999996 9999999999999999 99999998877666544321110 00   1 1234566777788889988764

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.07  E-value=0.0042  Score=46.24  Aligned_cols=75  Identities=11%  Similarity=0.054  Sum_probs=47.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEE-EEEccCCCchHHHHHh-----cCc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLR-VFEADVLDSGAVSRAV-----EGC   81 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~-----~~~   81 (331)
                      ...+|||.|+ |.+|...++.+...|...|++.++++......+++      +.. ++..+- +.+...+.+     .++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~l------Ga~~~i~~~~-~~~~~~~~~~~~~~~g~   99 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF------GATECINPQD-FSKPIQEVLIEMTDGGV   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH------TCSEEECGGG-CSSCHHHHHHHHTTSCB
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHh------CCcEEEeCCc-hhhHHHHHHHHHcCCCC
Confidence            3458999998 56899999999999964788777766665555554      222 222211 112222222     358


Q ss_pred             cEEEEcccC
Q 020110           82 KGVFHVASP   90 (331)
Q Consensus        82 d~vih~a~~   90 (331)
                      |+||.+.+.
T Consensus       100 D~vid~~G~  108 (176)
T d2fzwa2         100 DYSFECIGN  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             cEeeecCCC
Confidence            999998763

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.0048  Score=43.16  Aligned_cols=34  Identities=15%  Similarity=0.178  Sum_probs=31.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      ++++|.|| |++|-.++..|.+.|. +|+.+.|++.
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~-~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGS-KTSLMIRHDK   56 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCc-EEEEEeeccc
Confidence            68999998 9999999999999999 9999988654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.05  E-value=0.0056  Score=42.37  Aligned_cols=34  Identities=21%  Similarity=0.126  Sum_probs=31.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      ++++|.|| |+||-.++..|.+.|. +|+.+.|...
T Consensus        23 ~~i~IiG~-G~ig~E~A~~l~~~G~-~Vtiv~~~~~   56 (119)
T d3lada2          23 GKLGVIGA-GVIGLELGSVWARLGA-EVTVLEAMDK   56 (119)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CeEEEECC-ChHHHHHHHHHHHcCC-ceEEEEeecc
Confidence            68999998 9999999999999999 9999987654

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.05  E-value=0.023  Score=36.73  Aligned_cols=69  Identities=10%  Similarity=0.087  Sum_probs=45.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCcc-chhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      |||.++|-.|-==+.|++.|.++|+ .|.+.++...+. ..+...      ++++..+.  +++    .++++|.||...
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~------Gi~i~~gh--~~~----~i~~~d~vV~Ss   68 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKL------GIPIFVPH--SAD----NWYDPDLVIKTP   68 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHT------TCCEESSC--CTT----SCCCCSEEEECT
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHC------CCeEEeee--ccc----ccCCCCEEEEec
Confidence            4788887655444578999999999 999998875332 333333      55554431  222    236789999988


Q ss_pred             cCC
Q 020110           89 SPC   91 (331)
Q Consensus        89 ~~~   91 (331)
                      +..
T Consensus        69 AI~   71 (89)
T d1j6ua1          69 AVR   71 (89)
T ss_dssp             TCC
T ss_pred             CcC
Confidence            763

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.03  E-value=0.0041  Score=43.28  Aligned_cols=34  Identities=24%  Similarity=0.368  Sum_probs=30.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      ++++|.|| |++|-.++..|.+.|+ +|+.+.|.+.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~-~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGY-HVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTC-EEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccc-eEEEEecccc
Confidence            68999998 9999999999999999 9999977643

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.03  E-value=0.0082  Score=44.60  Aligned_cols=76  Identities=20%  Similarity=0.141  Sum_probs=50.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCC--chHHHHHh--cCccEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD--SGAVSRAV--EGCKGV   84 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~--~~~d~v   84 (331)
                      ..+|+|+|+ |.||...++.+...|...|++.++++.+....+++.     -..++...-.+  ...+.+..  .++|+|
T Consensus        29 G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~G-----a~~~i~~~~~~~~~~~~~~~~~~~G~d~v  102 (174)
T d1e3ia2          29 GSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG-----ATDCLNPRELDKPVQDVITELTAGGVDYS  102 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT-----CSEEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhC-----CCcccCCccchhhhhhhHhhhhcCCCcEE
Confidence            458999985 999999999999999757888877776655555552     11233222222  12222222  468999


Q ss_pred             EEcccC
Q 020110           85 FHVASP   90 (331)
Q Consensus        85 ih~a~~   90 (331)
                      |.++|.
T Consensus       103 ie~~G~  108 (174)
T d1e3ia2         103 LDCAGT  108 (174)
T ss_dssp             EESSCC
T ss_pred             EEeccc
Confidence            999874

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.97  E-value=0.0092  Score=43.84  Aligned_cols=43  Identities=16%  Similarity=0.117  Sum_probs=36.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~   53 (331)
                      ..+|+|.|+ |.+|...++.+...|. +|+++++++.+.+..+++
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~   70 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKL   70 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHT
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCC-ccceecchhhHHHhhhcc
Confidence            468999986 9999999999988998 999999887666666555

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.92  E-value=0.0048  Score=42.96  Aligned_cols=32  Identities=16%  Similarity=0.145  Sum_probs=29.6

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (331)
                      ++++|+|| |+||-.++..|.+.|. +|+.+.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCC-eEEEEEec
Confidence            58999998 9999999999999999 99999765

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.92  E-value=0.0041  Score=46.32  Aligned_cols=74  Identities=12%  Similarity=0.038  Sum_probs=50.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcE-EEEEccCCCc---hHHHHHhc--Cc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDS---GAVSRAVE--GC   81 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~---~~~~~~~~--~~   81 (331)
                      ...+|+|.|+ |-+|...++.+...|..+|+++++++.+....+++      ++ .++  |..+.   +.+.+...  ++
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~l------Ga~~~i--~~~~~~~~~~v~~~t~g~G~   97 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFY------GATDIL--NYKNGHIEDQVMKLTNGKGV   97 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHH------TCSEEE--CGGGSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhh------Cccccc--cccchhHHHHHHHHhhccCc
Confidence            3458999986 99999999999888965799888776655555544      22 233  33332   33334432  48


Q ss_pred             cEEEEcccC
Q 020110           82 KGVFHVASP   90 (331)
Q Consensus        82 d~vih~a~~   90 (331)
                      |+||.+++.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999874

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.91  E-value=0.0056  Score=48.33  Aligned_cols=34  Identities=26%  Similarity=0.311  Sum_probs=31.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      .++|+|+|| |..|...+..|.++|+ +|+++.|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~-~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGY-SVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            358999998 9999999999999999 999998854

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.87  E-value=0.051  Score=38.10  Aligned_cols=75  Identities=21%  Similarity=0.284  Sum_probs=48.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHC-CCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEccc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a~   89 (331)
                      ||.|.|++|-+|+.+++.+.+. ++ ++.+.. +                        ..+.... -...++|+||.+..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~~-d------------------------~~~~~~~-~~~~~~DvvIDFS~   53 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAEL-D------------------------AGDPLSL-LTDGNTEVVIDFTH   53 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEEE-C------------------------TTCCTHH-HHTTTCSEEEECCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEEE-e------------------------cCCchhh-hccccCCEEEEccc
Confidence            6899999999999999998775 46 665542 1                        1111110 11246899998754


Q ss_pred             CCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      +          .        ++...++.|.+.+++ +|. +|+
T Consensus        54 p----------~--------~~~~~~~~~~~~~~~-~Vi-GTT   76 (135)
T d1yl7a1          54 P----------D--------VVMGNLEFLIDNGIH-AVV-GTT   76 (135)
T ss_dssp             T----------T--------THHHHHHHHHHTTCE-EEE-CCC
T ss_pred             H----------H--------HHHHHHHHHHhcCCC-EEE-ecc
Confidence            3          1        244678888888864 554 554

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.82  E-value=0.062  Score=42.06  Aligned_cols=102  Identities=14%  Similarity=0.084  Sum_probs=63.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCC--C------------------CC-CcEEEEEcc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--A------------------GD-ANLRVFEAD   67 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~------------------~~-~~~~~~~~D   67 (331)
                      ..+|+|.|+ |-+|++++..|...|..++++++.+.-+..++.+..-  .                  .+ .+++.+...
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~  108 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  108 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhh
Confidence            469999996 8899999999999998789998876655555554320  0                  01 123333222


Q ss_pred             CCCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           68 VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        68 l~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      + +.......+...|+||.+...                 ......+-++|.+.+++ +|+.+
T Consensus       109 ~-~~~~~~~~~~~~divid~~d~-----------------~~~~~~in~~~~~~~ip-~i~g~  152 (247)
T d1jw9b_         109 L-DDAELAALIAEHDLVLDCTDN-----------------VAVRNQLNAGCFAAKVP-LVSGA  152 (247)
T ss_dssp             C-CHHHHHHHHHTSSEEEECCSS-----------------HHHHHHHHHHHHHHTCC-EEEEE
T ss_pred             h-hhccccccccccceeeeccch-----------------hhhhhhHHHHHHHhCCC-ccccc
Confidence            2 234455666778888865321                 12233456677777764 66644

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.81  E-value=0.0068  Score=42.85  Aligned_cols=35  Identities=20%  Similarity=0.360  Sum_probs=31.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      .++|+|.|| |++|-.++..|.+.|. +|+.+.+.+.
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~-~Vtvie~~~~   69 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANM-HVTLLDTAAR   69 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCc-ceeeeeeccc
Confidence            479999998 9999999999999999 9999987653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.78  E-value=0.0055  Score=42.10  Aligned_cols=33  Identities=18%  Similarity=0.219  Sum_probs=30.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      ++++|.|| |++|-.++..|.+.|+ +|+.+.|.+
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhccc-ceEEEeeec
Confidence            68999998 9999999999999999 999997754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.0053  Score=46.48  Aligned_cols=36  Identities=14%  Similarity=0.170  Sum_probs=32.6

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (331)
                      .++|.|.|+ |.+|+.++..++..|+ +|++.++++..
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~-~V~l~D~~~~~   39 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGH-TVVLVDQTEDI   39 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCC-cEEEEECChHH
Confidence            469999998 9999999999999999 99999887643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.74  E-value=0.0082  Score=45.53  Aligned_cols=65  Identities=9%  Similarity=0.054  Sum_probs=46.9

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|.|.|- |-||+.+++.|..-|. +|++.++.......  .              +.....++.++++++|+|+.+
T Consensus        42 ~gk~vgIiG~-G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~--~--------------~~~~~~~l~~~l~~sDii~~~  103 (197)
T d1j4aa1          42 RDQVVGVVGT-GHIGQVFMQIMEGFGA-KVITYDIFRNPELE--K--------------KGYYVDSLDDLYKQADVISLH  103 (197)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCCHHHH--H--------------TTCBCSCHHHHHHHCSEEEEC
T ss_pred             cCCeEEEecc-cccchhHHHhHhhhcc-cccccCcccccccc--c--------------ceeeecccccccccccccccc
Confidence            4679999996 9999999999999999 99998764432111  1              111234577788889988876


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ...
T Consensus       104 ~pl  106 (197)
T d1j4aa1         104 VPD  106 (197)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            644

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.69  E-value=0.0037  Score=47.58  Aligned_cols=38  Identities=18%  Similarity=0.276  Sum_probs=29.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~   50 (331)
                      |||.|.| .|++|..++..| ++|+ +|++++.++...+.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l   38 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKI   38 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCC-cEEEEECCHHHHHHH
Confidence            4899997 699999998755 6799 999998766544443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.65  E-value=0.014  Score=42.59  Aligned_cols=58  Identities=16%  Similarity=0.068  Sum_probs=45.8

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...|+|+|.|-+..+|+.|+..|.++|. .|+...+...                           .+...+.++|+||.
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t~---------------------------~l~~~~~~ADivI~   86 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFTK---------------------------NLRHHVENADLLIV   86 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSCS---------------------------CHHHHHHHCSEEEE
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhc-cccccccccc---------------------------hhHHHHhhhhHhhh
Confidence            3568999999999999999999999999 9887743221                           23455678899999


Q ss_pred             cccCCC
Q 020110           87 VASPCT   92 (331)
Q Consensus        87 ~a~~~~   92 (331)
                      .+|...
T Consensus        87 a~G~p~   92 (166)
T d1b0aa1          87 AVGKPG   92 (166)
T ss_dssp             CSCCTT
T ss_pred             hccCcc
Confidence            988654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.63  E-value=0.011  Score=43.63  Aligned_cols=76  Identities=16%  Similarity=0.062  Sum_probs=49.1

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh--cCccEEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--EGCKGVFH   86 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~vih   86 (331)
                      ..+|+|.|+ |.+|...++.+...|...|++.++++.+.....+..     ..+++..+-.+.+.+.+..  .++|+||.
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~g-----a~~~i~~~~~~~~~~~~~~~~~g~d~vid  106 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLG-----ADHVVDARRDPVKQVMELTRGRGVNVAMD  106 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTT-----CSEEEETTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcc-----cceeecCcccHHHHHHHhhCCCCceEEEE
Confidence            458999986 999999999988888647787777766555555542     2234433222223333333  24899999


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      +++.
T Consensus       107 ~~g~  110 (172)
T d1h2ba2         107 FVGS  110 (172)
T ss_dssp             SSCC
T ss_pred             ecCc
Confidence            9874

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.62  E-value=0.0067  Score=45.67  Aligned_cols=37  Identities=16%  Similarity=0.179  Sum_probs=33.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (331)
                      +.++|.|.|+ |.+|+.++..++..|+ +|+++++++..
T Consensus         3 ~I~~vaViGa-G~mG~~iA~~~a~~G~-~V~l~D~~~~~   39 (186)
T d1wdka3           3 DVKQAAVLGA-GIMGGGIAYQSASKGT-PILMKDINEHG   39 (186)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTC-CEEEECSSHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCC-eEEEEECCHHH
Confidence            4679999998 9999999999999999 99999987644

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.61  E-value=0.029  Score=38.73  Aligned_cols=72  Identities=13%  Similarity=0.111  Sum_probs=52.1

Q ss_pred             CCeEEEeCc----------chHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh
Q 020110            9 EETVCVTGA----------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV   78 (331)
Q Consensus         9 ~~~vlVtGa----------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   78 (331)
                      .|+|||.|+          --+-+.+.++.|.+.|+ +++.+.-++.....-...       ..-+.......+.+.+.+
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-------aD~lYfePlt~e~v~~Ii   78 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-------ADATYIEPIHWEVVRKII   78 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-------SSEEECSCCCHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-------cceeeeecCCHHHHHHHH
Confidence            479999999          55789999999999999 999887666543332221       223456666778888887


Q ss_pred             c--CccEEEEcc
Q 020110           79 E--GCKGVFHVA   88 (331)
Q Consensus        79 ~--~~d~vih~a   88 (331)
                      +  ++|.|+-..
T Consensus        79 ~~E~pd~il~~~   90 (127)
T d1a9xa3          79 EKERPDAVLPTM   90 (127)
T ss_dssp             HHHCCSEEECSS
T ss_pred             HHhCcCCeEEEe
Confidence            4  699988543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.60  E-value=0.012  Score=43.83  Aligned_cols=75  Identities=15%  Similarity=0.112  Sum_probs=51.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEE-EEE-ccCCC-chHHHHHh--cCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLR-VFE-ADVLD-SGAVSRAV--EGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~-~Dl~~-~~~~~~~~--~~~d~   83 (331)
                      ..+|+|+|+ |-+|...++.+...|..+|+++++++.+.+..+++      +.. ++. -|-.+ .+.+.+..  .++|+
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~------GA~~~in~~~~~~~~~~~~~~~~g~G~d~  102 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV------GATECISPKDSTKPISEVLSEMTGNNVGY  102 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH------TCSEEECGGGCSSCHHHHHHHHHTSCCCE
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc------CCcEEECccccchHHHHHHHHhccccceE
Confidence            458999986 99999999999999965899999888776666655      222 222 22211 12233333  46999


Q ss_pred             EEEcccC
Q 020110           84 VFHVASP   90 (331)
Q Consensus        84 vih~a~~   90 (331)
                      +|.+.+.
T Consensus       103 vi~~~g~  109 (176)
T d1d1ta2         103 TFEVIGH  109 (176)
T ss_dssp             EEECSCC
T ss_pred             EEEeCCc
Confidence            9998774

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.60  E-value=0.0064  Score=42.34  Aligned_cols=35  Identities=20%  Similarity=0.265  Sum_probs=31.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (331)
                      ++++|.|| |+||-.++..|.+.|. +|+.+.|++..
T Consensus        26 ~~~viiG~-G~iglE~A~~~~~~G~-~Vtvi~~~~~~   60 (123)
T d1dxla2          26 KKLVVIGA-GYIGLEMGSVWGRIGS-EVTVVEFASEI   60 (123)
T ss_dssp             SEEEESCC-SHHHHHHHHHHHHHTC-EEEEECSSSSS
T ss_pred             CeEEEEcc-chHHHHHHHHHHhcCC-eEEEEEEcccc
Confidence            68999998 9999999999999999 99999887644

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.59  E-value=0.012  Score=43.66  Aligned_cols=75  Identities=15%  Similarity=0.034  Sum_probs=50.8

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEE-EEEccCCC--chHHHHHh--cCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLR-VFEADVLD--SGAVSRAV--EGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~--~~~~~~~~--~~~d~   83 (331)
                      ..+|+|.|+ |-+|...++.+...|..+|++.++++.+.+..+++      +.. ++...-.|  .+......  .++|+
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~l------Ga~~~i~~~~~d~~~~~~~~~~~~~G~d~  100 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL------GATECLNPKDYDKPIYEVICEKTNGGVDY  100 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT------TCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHc------CCcEEEcCCCchhHHHHHHHHhcCCCCcE
Confidence            458999996 99999999999999965899998887776666665      222 23221122  12232333  35899


Q ss_pred             EEEcccC
Q 020110           84 VFHVASP   90 (331)
Q Consensus        84 vih~a~~   90 (331)
                      ||.+++.
T Consensus       101 vid~~g~  107 (174)
T d1p0fa2         101 AVECAGR  107 (174)
T ss_dssp             EEECSCC
T ss_pred             EEEcCCC
Confidence            9998764

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.58  E-value=0.0032  Score=47.13  Aligned_cols=41  Identities=20%  Similarity=0.281  Sum_probs=35.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA   52 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~   52 (331)
                      |||-|.|- |.+|+.+++.|+++|| +|.+.+|++.+...+.+
T Consensus         2 MkIGvIGl-G~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~   42 (178)
T d1pgja2           2 MDVGVVGL-GVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMK   42 (178)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHH
T ss_pred             CEEEEEee-hHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHH
Confidence            37999985 9999999999999999 99999998776655543

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.46  E-value=0.027  Score=41.73  Aligned_cols=32  Identities=19%  Similarity=0.312  Sum_probs=26.7

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEec
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVF   42 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r   42 (331)
                      |-||.|-| .|.||+.+++.|.+++ . +|+++..
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~di-evVaInd   33 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDM-KLVGVAK   33 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTE-EEEEEEC
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCC-EEEEEEC
Confidence            56899998 6999999999999875 6 8887753

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.44  E-value=0.031  Score=40.92  Aligned_cols=58  Identities=14%  Similarity=0.103  Sum_probs=45.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...|+|+|.|-+..+|+.|+..|+++|. .|+...+...                           .+.+...++|+||.
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~---------------------------~l~~~~~~aDivi~   88 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTA---------------------------HLDEEVNKGDILVV   88 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCS---------------------------SHHHHHTTCSEEEE
T ss_pred             cccceEEEEecCCccchHHHHHHHhccC-ceEEEecccc---------------------------cHHHHHhhccchhh
Confidence            3578999999999999999999999999 9888754322                           13355678899888


Q ss_pred             cccCCC
Q 020110           87 VASPCT   92 (331)
Q Consensus        87 ~a~~~~   92 (331)
                      .++...
T Consensus        89 a~G~~~   94 (170)
T d1a4ia1          89 ATGQPE   94 (170)
T ss_dssp             CCCCTT
T ss_pred             cccccc
Confidence            877644

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.42  E-value=0.004  Score=45.22  Aligned_cols=41  Identities=17%  Similarity=0.184  Sum_probs=34.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCccchhhc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFA   52 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~   52 (331)
                      |||.+.|+ |-+|+++++.|++.| + +|++.+|++.....+.+
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~-~i~v~~r~~~~~~~l~~   42 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGY-RIYIANRGAEKRERLEK   42 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCC-cEEEEeCChhHHHHhhh
Confidence            48999987 999999999999888 6 99999998766555543

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.41  E-value=0.043  Score=37.35  Aligned_cols=72  Identities=17%  Similarity=0.119  Sum_probs=50.4

Q ss_pred             CCCeEEEeCc----------chHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHH
Q 020110            8 EEETVCVTGA----------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA   77 (331)
Q Consensus         8 ~~~~vlVtGa----------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   77 (331)
                      ..++|||.|+          --+-+.+.++.|.+.|+ +++.+.-++.....-...       ..-+...-...+.+.+.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-------aD~lYfeplt~e~v~~I   74 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-------SDRLYFEPVTLEDVLEI   74 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-------SSEEECCCCSHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-------cCceEEccCCHHHHHHH
Confidence            3479999998          34889999999999999 999887666554322221       22344555566777777


Q ss_pred             h--cCccEEEEc
Q 020110           78 V--EGCKGVFHV   87 (331)
Q Consensus        78 ~--~~~d~vih~   87 (331)
                      +  +++|.|+-.
T Consensus        75 i~~E~p~~ii~~   86 (121)
T d1a9xa4          75 VRIEKPKGVIVQ   86 (121)
T ss_dssp             HHHHCCSEEECS
T ss_pred             HHHhCCCEEEee
Confidence            6  468888743

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.36  E-value=0.01  Score=41.41  Aligned_cols=34  Identities=12%  Similarity=0.174  Sum_probs=30.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      ++++|.|| |+||-.++..|.+.|. +|+.+.+.+.
T Consensus        27 ~~vvIiGg-G~IG~E~A~~~~~~G~-~Vtive~~~~   60 (125)
T d1ojta2          27 GKLLIIGG-GIIGLEMGTVYSTLGS-RLDVVEMMDG   60 (125)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHhhcCCC-EEEEEEeecc
Confidence            68999998 9999999999999999 9999987653

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.35  E-value=0.053  Score=36.96  Aligned_cols=84  Identities=17%  Similarity=0.252  Sum_probs=54.2

Q ss_pred             CeEEEeCcc---hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110           10 ETVCVTGAN---GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGat---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      |+|.|.|++   +-.|..+++.|++.|+ +|+.+.  +.... ..        +...       ..++.++-+.+|.++-
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~-~V~pVn--P~~~~-i~--------G~~~-------y~sl~~lp~~~D~vvi   62 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGF-EVLPVN--PNYDE-IE--------GLKC-------YRSVRELPKDVDVIVF   62 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEEC--TTCSE-ET--------TEEC-------BSSGGGSCTTCCEEEE
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCC-EEEEEc--ccccc-cc--------Cccc-------cccchhccccceEEEE
Confidence            589999988   7899999999999999 999873  32211 10        2222       1223333346788775


Q ss_pred             cccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      +..          +.        .+..+++.|.+.|++.+++-+
T Consensus        63 ~vp----------~~--------~~~~~l~~~~~~g~k~v~~~~   88 (116)
T d1y81a1          63 VVP----------PK--------VGLQVAKEAVEAGFKKLWFQP   88 (116)
T ss_dssp             CSC----------HH--------HHHHHHHHHHHTTCCEEEECT
T ss_pred             EeC----------HH--------HHHHHHHHHHhcCCceEEecc
Confidence            432          12        244677788888998766533

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.35  E-value=0.015  Score=43.79  Aligned_cols=68  Identities=12%  Similarity=-0.024  Sum_probs=47.6

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      ...++|.|.|. |-||+.+++.|..-|. +|++.++..........       +       +....++.++++.+|+|+.
T Consensus        47 L~gktvgIiG~-G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~-------~-------~~~~~~l~~ll~~sD~i~~  110 (193)
T d1mx3a1          47 IRGETLGIIGL-GRVGQAVALRAKAFGF-NVLFYDPYLSDGVERAL-------G-------LQRVSTLQDLLFHSDCVTL  110 (193)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTC-EEEEECTTSCTTHHHHH-------T-------CEECSSHHHHHHHCSEEEE
T ss_pred             eeCceEEEecc-ccccccceeeeecccc-ceeeccCcccccchhhh-------c-------cccccchhhccccCCEEEE
Confidence            34679999986 9999999999999999 99999775443221111       1       1122356778888998776


Q ss_pred             cccC
Q 020110           87 VASP   90 (331)
Q Consensus        87 ~a~~   90 (331)
                      +...
T Consensus       111 ~~pl  114 (193)
T d1mx3a1         111 HCGL  114 (193)
T ss_dssp             CCCC
T ss_pred             eecc
Confidence            6543

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.21  E-value=0.02  Score=42.82  Aligned_cols=66  Identities=14%  Similarity=-0.020  Sum_probs=46.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..+++.|.|. |.||+.+++.|..-|. +|++.++..........       .++        ..++.++++++|+|+-+
T Consensus        43 ~~k~vgiiG~-G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~~~~-------~~~--------~~~l~ell~~sDiv~~~  105 (184)
T d1ygya1          43 FGKTVGVVGL-GRIGQLVAQRIAAFGA-YVVAYDPYVSPARAAQL-------GIE--------LLSLDDLLARADFISVH  105 (184)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTC-EEEEECTTSCHHHHHHH-------TCE--------ECCHHHHHHHCSEEEEC
T ss_pred             cceeeeeccc-cchhHHHHHHhhhccc-eEEeecCCCChhHHhhc-------Cce--------eccHHHHHhhCCEEEEc
Confidence            4578888885 9999999999998999 99998765443322211       111        23466788889998766


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ...
T Consensus       106 ~Pl  108 (184)
T d1ygya1         106 LPK  108 (184)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.21  E-value=0.011  Score=48.37  Aligned_cols=35  Identities=17%  Similarity=0.334  Sum_probs=31.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      +|+|+|+|| |+-|...+..|.++|+ +|+++.++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~-~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGH-QVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCC-CEEEEECCCC
Confidence            579999998 9999999999999999 9999987553

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.21  E-value=0.011  Score=42.55  Aligned_cols=33  Identities=21%  Similarity=0.356  Sum_probs=28.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHC--CCCEEEEEec
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDN--NYTSINATVF   42 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r   42 (331)
                      ||+|.|.|+||-||...++-+.+.  .+ +|.+++=
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa   35 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVA   35 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEE
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEe
Confidence            789999999999999999988875  46 8888764

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.18  E-value=0.025  Score=41.53  Aligned_cols=82  Identities=7%  Similarity=-0.016  Sum_probs=52.2

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccC--CCchHHHHHhcCccE
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV--LDSGAVSRAVEGCKG   83 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~~~d~   83 (331)
                      +..+|+++|.|-+.-+|+.++..|+++|. .|+..+++.....  .......  -......|+  ...+.+++...++|+
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~ga-TVt~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~lk~~~~~aDI  100 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKF--TRGESLK--LNKHHVEDLGEYSEDLLKKCSLDSDV  100 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEE--ESCCCSS--CCCCEEEEEEECCHHHHHHHHHHCSE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCC-EEEEecccccccc--cccccee--eeeeccccccccchhHHhhccccCCE
Confidence            34678999999999999999999999999 9987754321110  0000000  000011222  234557777888999


Q ss_pred             EEEcccCCC
Q 020110           84 VFHVASPCT   92 (331)
Q Consensus        84 vih~a~~~~   92 (331)
                      ||..+|...
T Consensus       101 vIsavG~p~  109 (171)
T d1edza1         101 VITGVPSEN  109 (171)
T ss_dssp             EEECCCCTT
T ss_pred             EEEccCCCc
Confidence            998887543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.18  E-value=0.018  Score=43.32  Aligned_cols=68  Identities=19%  Similarity=0.047  Sum_probs=47.7

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|.|.|. |-||+.+++.|..-|. +|...+|...........      +       +....++.++++++|+|+-+
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~------~-------~~~~~~l~~~l~~sD~v~~~  107 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKEL------N-------LTWHATREDMYPVCDVVTLN  107 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHH------T-------CEECSSHHHHGGGCSEEEEC
T ss_pred             cccceeeccc-cccchhhhhhhhccCc-eEEEEeeccccccccccc------c-------ccccCCHHHHHHhccchhhc
Confidence            4578999995 9999999999999999 999998765443332221      1       12234566778889988665


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ...
T Consensus       108 ~pl  110 (188)
T d2naca1         108 CPL  110 (188)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.18  E-value=0.0037  Score=47.25  Aligned_cols=38  Identities=8%  Similarity=0.105  Sum_probs=31.6

Q ss_pred             CeEEE-eCcchHHHHHHHHHHHHCCCCEEEEEecCCCccc
Q 020110           10 ETVCV-TGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS   48 (331)
Q Consensus        10 ~~vlV-tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~   48 (331)
                      .+++| +||+|-+|...++.....|. +|++++|+....+
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~   68 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLD   68 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHH
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccc
Confidence            46777 59999999999999988999 9999988765543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.17  E-value=0.016  Score=40.03  Aligned_cols=35  Identities=14%  Similarity=-0.065  Sum_probs=31.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      .++|+|.|| |++|-.++..|.+.|. +|+.+.|.+.
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~-~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGR-RTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcch-hheEeeccch
Confidence            479999998 9999999999999999 9999988653

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.12  E-value=0.011  Score=42.75  Aligned_cols=35  Identities=11%  Similarity=0.226  Sum_probs=30.9

Q ss_pred             ccCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEec
Q 020110            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (331)
Q Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r   42 (331)
                      ..+.|+|||+|| |.+|..-++.|++.|. +|++++-
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA-~VtVvap   44 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGC-KLTLVSP   44 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeC
Confidence            345789999999 9999999999999999 9998854

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.09  E-value=0.023  Score=41.21  Aligned_cols=67  Identities=13%  Similarity=0.071  Sum_probs=48.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..|+++|+| .|.||+.+++.|...|. +|++..+++..  .++..            .|--....+++++...|+||-+
T Consensus        23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G~-~V~v~e~dp~~--al~A~------------~dG~~v~~~~~a~~~adivvta   86 (163)
T d1li4a1          23 AGKVAVVAG-YGDVGKGCAQALRGFGA-RVIITEIDPIN--ALQAA------------MEGYEVTTMDEACQEGNIFVTT   86 (163)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSCHHH--HHHHH------------HTTCEECCHHHHTTTCSEEEEC
T ss_pred             cCCEEEEec-cccccHHHHHHHHhCCC-eeEeeecccch--hHHhh------------cCceEeeehhhhhhhccEEEec
Confidence            467999998 59999999999999999 99999776533  22221            1222223466788889999987


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      .+.
T Consensus        87 TGn   89 (163)
T d1li4a1          87 TGC   89 (163)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            664

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.06  E-value=0.019  Score=43.24  Aligned_cols=68  Identities=16%  Similarity=0.065  Sum_probs=47.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..+++.|.|. |-||+.+++.|..-|. +|...++...........             .....+++.++++++|+|+-+
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~-------------~~~~~~~l~~ll~~sD~v~l~  110 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASY-------------QATFHDSLDSLLSVSQFFSLN  110 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHH-------------TCEECSSHHHHHHHCSEEEEC
T ss_pred             cccceEEeec-ccchHHHHHHHHhhcc-ccccccccccccchhhcc-------------cccccCCHHHHHhhCCeEEec
Confidence            4579999996 9999999999999999 999987654432222111             011223577888889998765


Q ss_pred             ccC
Q 020110           88 ASP   90 (331)
Q Consensus        88 a~~   90 (331)
                      ...
T Consensus       111 ~pl  113 (191)
T d1gdha1         111 APS  113 (191)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.03  E-value=0.033  Score=41.98  Aligned_cols=75  Identities=15%  Similarity=0.077  Sum_probs=51.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc---hHHHHHhc--CccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GAVSRAVE--GCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~~d~   83 (331)
                      ..+|||.|+ |-+|...+..+...|...|++.++++.......++      +...+. |-.+.   +.+.++..  ++|+
T Consensus        26 G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~------Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~   97 (195)
T d1kola2          26 GSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ------GFEIAD-LSLDTPLHEQIAALLGEPEVDC   97 (195)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCEEEE-TTSSSCHHHHHHHHHSSSCEEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc------cccEEE-eCCCcCHHHHHHHHhCCCCcEE
Confidence            458999986 99998888888788865888888877666665555      444443 33332   23444433  4899


Q ss_pred             EEEcccCC
Q 020110           84 VFHVASPC   91 (331)
Q Consensus        84 vih~a~~~   91 (331)
                      +|.+.|..
T Consensus        98 vid~vG~~  105 (195)
T d1kola2          98 AVDAVGFE  105 (195)
T ss_dssp             EEECCCTT
T ss_pred             EEECcccc
Confidence            99998743

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.00  E-value=0.011  Score=47.11  Aligned_cols=31  Identities=23%  Similarity=0.218  Sum_probs=28.9

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      |+|+|| |.+|..++.+|.++|+ +|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            999998 9999999999999999 999998754

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.91  E-value=0.022  Score=43.17  Aligned_cols=63  Identities=16%  Similarity=0.088  Sum_probs=45.6

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|.|.|. |-||+.+++.|..-|. +|++.++........         .+.        ..++.++++.+|+|+.+
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~---------~~~--------~~~l~~l~~~~D~v~~~  104 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGA-KVIAYDPYPMKGDHP---------DFD--------YVSLEDLFKQSDVIDLH  104 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCCSSCCT---------TCE--------ECCHHHHHHHCSEEEEC
T ss_pred             cceeeeeeec-ccccccccccccccce-eeeccCCccchhhhc---------chh--------HHHHHHHHHhcccceee
Confidence            4579999996 9999999999999999 999997754332110         111        22466778889988776


Q ss_pred             cc
Q 020110           88 AS   89 (331)
Q Consensus        88 a~   89 (331)
                      ..
T Consensus       105 ~p  106 (199)
T d1dxya1         105 VP  106 (199)
T ss_dssp             CC
T ss_pred             ec
Confidence            54

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.89  E-value=0.061  Score=37.97  Aligned_cols=85  Identities=16%  Similarity=0.150  Sum_probs=55.1

Q ss_pred             CCeEEEeCcc---hHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEE
Q 020110            9 EETVCVTGAN---GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGat---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   85 (331)
                      .++|.|+|++   +-.|..+++.|.+.|+ +|+.+.  +... ...        +...       ..++.++-..+|.|+
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~-~v~pVn--P~~~-~i~--------G~~~-------~~sl~dlp~~iD~v~   79 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGY-DVYPVN--PKYE-EVL--------GRKC-------YPSVLDIPDKIEVVD   79 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEEC--TTCS-EET--------TEEC-------BSSGGGCSSCCSEEE
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCC-EEEEEC--Cccc-ccC--------CCcc-------cccccccCccceEEE
Confidence            4689999998   8899999999999999 999883  3221 110        1211       122333344578877


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeC
Q 020110           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (331)
Q Consensus        86 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  130 (331)
                      -+..          +.        .+..+++.|.+.|++.+++.+
T Consensus        80 i~vp----------~~--------~~~~~~~e~~~~g~k~v~~~~  106 (139)
T d2d59a1          80 LFVK----------PK--------LTMEYVEQAIKKGAKVVWFQY  106 (139)
T ss_dssp             ECSC----------HH--------HHHHHHHHHHHHTCSEEEECT
T ss_pred             EEeC----------HH--------HHHHHHHHHHHhCCCEEEEec
Confidence            5532          11        244677877788988766644

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.87  E-value=0.025  Score=42.02  Aligned_cols=37  Identities=14%  Similarity=0.113  Sum_probs=32.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      .+.|+|+|+|| |.-|-..+..|.+.|| +|+++.+.+.
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~-~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGH-QVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhcc-ceEEEeccCc
Confidence            34579999998 9999999999999999 9999987653

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.81  E-value=0.015  Score=41.78  Aligned_cols=35  Identities=31%  Similarity=0.374  Sum_probs=29.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHC--CCCEEEEEecC
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFP   43 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~   43 (331)
                      ++|+|.|.|+||-||...++-+.+.  .+ +|.+++=+
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~   37 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTAN   37 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEES
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeC
Confidence            3689999999999999999988775  47 88888643

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.75  E-value=0.022  Score=41.73  Aligned_cols=72  Identities=17%  Similarity=0.113  Sum_probs=49.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCc---hHHHHHhcCccEEE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GAVSRAVEGCKGVF   85 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~d~vi   85 (331)
                      ..+|+|.|+ |-+|...++.+...|. +|+++++++.+....+++      ++..+. |..+.   +.+.+.-.+.+.+|
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~------Ga~~~~-~~~~~~~~~~~~~~~~~~~~~v   98 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKEL------GADLVV-NPLKEDAAKFMKEKVGGVHAAV   98 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCSEEE-CTTTSCHHHHHHHHHSSEEEEE
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhc------Ccceec-ccccchhhhhcccccCCCceEE
Confidence            458999875 8899999999999999 999998887776666665      333332 23222   23444455666666


Q ss_pred             Eccc
Q 020110           86 HVAS   89 (331)
Q Consensus        86 h~a~   89 (331)
                      .+++
T Consensus        99 ~~~~  102 (168)
T d1rjwa2          99 VTAV  102 (168)
T ss_dssp             ESSC
T ss_pred             eecC
Confidence            6553

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.66  E-value=0.047  Score=40.19  Aligned_cols=75  Identities=13%  Similarity=0.049  Sum_probs=48.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcE-EEEEccCCC--chHHHHHh--cCccE
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLD--SGAVSRAV--EGCKG   83 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~--~~~~~~~~--~~~d~   83 (331)
                      ..+|+|+|+ |-+|...+..+...|...|++.++++.+.+...++      ++ +++..+-.+  .+.+....  .++|+
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~------GAd~~in~~~~~~~~~~~~~~~~~~G~d~  101 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF------GATDFVNPNDHSEPISQVLSKMTNGGVDF  101 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT------TCCEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHc------CCcEEEcCCCcchhHHHHHHhhccCCcce
Confidence            458999997 55888888888888764899998887776666665      32 233222111  12333333  35999


Q ss_pred             EEEcccC
Q 020110           84 VFHVASP   90 (331)
Q Consensus        84 vih~a~~   90 (331)
                      |+.+.+.
T Consensus       102 vid~~G~  108 (175)
T d1cdoa2         102 SLECVGN  108 (175)
T ss_dssp             EEECSCC
T ss_pred             eeeecCC
Confidence            9998874

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.65  E-value=0.022  Score=43.17  Aligned_cols=67  Identities=18%  Similarity=0.130  Sum_probs=46.7

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHh-cCccEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-EGCKGVF   85 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vi   85 (331)
                      .+.++|+|-| .|-+|+++++.|.+.|. .|++.+.+..........      +.+.+     +.+   +++ .++|+++
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~------g~~~~-----~~~---~~~~~~~DI~i   88 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVAL------GHTAV-----ALE---DVLSTPCDVFA   88 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCEEC-----CGG---GGGGCCCSEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhh------ccccc-----Ccc---ccccccceeee
Confidence            4568999998 59999999999999999 999887655443333332      22222     222   234 3689999


Q ss_pred             Eccc
Q 020110           86 HVAS   89 (331)
Q Consensus        86 h~a~   89 (331)
                      -||.
T Consensus        89 PcA~   92 (201)
T d1c1da1          89 PCAM   92 (201)
T ss_dssp             ECSC
T ss_pred             cccc
Confidence            8875

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.58  E-value=0.059  Score=40.27  Aligned_cols=65  Identities=14%  Similarity=-0.026  Sum_probs=46.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..++|.|.|- |.||+.+++.|..-|. +|+..++.......          ..  .     ..++++++++.+|+|+-+
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~----------~~--~-----~~~~l~ell~~sDii~i~  103 (188)
T d1sc6a1          43 RGKKLGIIGY-GHIGTQLGILAESLGM-YVYFYDIENKLPLG----------NA--T-----QVQHLSDLLNMSDVVSLH  103 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCCCCCT----------TC--E-----ECSCHHHHHHHCSEEEEC
T ss_pred             cceEEEEeec-ccchhhhhhhcccccc-eEeeccccccchhh----------hh--h-----hhhhHHHHHhhccceeec
Confidence            4578999985 9999999999999999 99999765332111          11  0     113567788889998876


Q ss_pred             ccCC
Q 020110           88 ASPC   91 (331)
Q Consensus        88 a~~~   91 (331)
                      ....
T Consensus       104 ~plt  107 (188)
T d1sc6a1         104 VPEN  107 (188)
T ss_dssp             CCSS
T ss_pred             ccCC
Confidence            6543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.50  E-value=0.022  Score=42.66  Aligned_cols=36  Identities=17%  Similarity=0.109  Sum_probs=31.2

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      .+||+|+|| |..|-..+..|.+.|+..|+++.|++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            479999998 999999999999999834888887653

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.46  E-value=0.027  Score=44.28  Aligned_cols=35  Identities=14%  Similarity=0.169  Sum_probs=31.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      -+||+|+|| |..|..++..|.++|+ +|+++.|++.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~-~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGV-DVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            358999998 9999999999999999 9999987653

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.44  E-value=0.041  Score=46.86  Aligned_cols=76  Identities=20%  Similarity=0.110  Sum_probs=51.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCC--CC-------------------CCCcEEEEEccC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--GA-------------------GDANLRVFEADV   68 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~~-------------------~~~~~~~~~~Dl   68 (331)
                      .||||.|+ |.+|+++++.|...|..++++++.+.-+..++.+..  ..                   ...++..+..++
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i  116 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKI  116 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCG
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeeccc
Confidence            48999998 669999999999999878998887655444443321  00                   011345555555


Q ss_pred             CCchHHHHHhcCccEEEEcc
Q 020110           69 LDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        69 ~~~~~~~~~~~~~d~vih~a   88 (331)
                      .+..  ...++++|+||.+.
T Consensus       117 ~~~~--~~~~~~~DlVi~~~  134 (426)
T d1yovb1         117 QDFN--DTFYRQFHIIVCGL  134 (426)
T ss_dssp             GGBC--HHHHTTCSEEEECC
T ss_pred             cchH--HHHHHhcchheecc
Confidence            5433  35678889998753

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=94.17  E-value=0.15  Score=35.14  Aligned_cols=92  Identities=9%  Similarity=0.130  Sum_probs=56.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHH-CCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcC-ccEEEEc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-CKGVFHV   87 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~d~vih~   87 (331)
                      .+|+|.|| |.+|+.|++++.. .++ +++++.-+....... ..    . ++.++.     .+.+.++..+ ++.++-+
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~-~iv~fiDdd~~k~G~-~I----~-Gi~V~~-----~~~l~~~~~~~i~iai~~   70 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESF-ELRGFFDVDPEKVGR-PV----R-GGVIEH-----VDLLPQRVPGRIEIALLT   70 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSE-EEEEEEESCTTTTTC-EE----T-TEEEEE-----GGGHHHHSTTTCCEEEEC
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCc-EEEEEEeCchHhcCC-EE----C-CEEEec-----HHHHHHHHhhcccEEEEe
Confidence            48999998 9999999998754 367 888776443322111 11    1 566653     3346666543 5554433


Q ss_pred             ccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCcc
Q 020110           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (331)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~  132 (331)
                      ..          ..        ....+++.+.+.+++.+..++..
T Consensus        71 i~----------~~--------~~~~I~d~l~~~gIk~I~~f~~~   97 (126)
T d2dt5a2          71 VP----------RE--------AAQKAADLLVAAGIKGILNFAPV   97 (126)
T ss_dssp             SC----------HH--------HHHHHHHHHHHHTCCEEEECSSS
T ss_pred             CC----------HH--------HHHHHHHHHHHcCCCEEeecCce
Confidence            21          11        23357777778899988887654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.14  E-value=0.018  Score=46.27  Aligned_cols=32  Identities=22%  Similarity=0.116  Sum_probs=29.8

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      +|+|+|| |..|..++..|.+.|+ +|+++.|++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~-~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGI-DNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            6999998 9999999999999999 999998765

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.12  E-value=0.028  Score=46.32  Aligned_cols=36  Identities=25%  Similarity=0.269  Sum_probs=30.8

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCCC
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGS   45 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~   45 (331)
                      +||+|+|+|| |.-|-..+..|+++|  + +|+++.|+..
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~-~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFD-QVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCS-EEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCC-CEEEEECCCC
Confidence            3679999998 999999999999876  6 8999988653

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.09  E-value=0.029  Score=41.28  Aligned_cols=35  Identities=17%  Similarity=0.085  Sum_probs=29.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCC-EEEEEecCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPG   44 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~   44 (331)
                      .|||+|.|| |++|-.++..|.+.+.. +|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            579999998 99999999999998741 788876654

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.72  E-value=0.054  Score=47.54  Aligned_cols=36  Identities=22%  Similarity=0.178  Sum_probs=30.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (331)
                      .+|+|.|+ |-+|..+++.|...|...+++++.+.-.
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~   61 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVS   61 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCC
Confidence            58999997 6799999999999997688888764433

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.68  E-value=0.2  Score=36.56  Aligned_cols=75  Identities=12%  Similarity=0.197  Sum_probs=44.9

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEecCCCcc--chhhcCCCCCCCcEEEEEcc-----------CCCchHH
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDS--SHLFALPGAGDANLRVFEAD-----------VLDSGAV   74 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D-----------l~~~~~~   74 (331)
                      |++|.|-| .|-||+.+++.|.+++ . +|+++.-..+..  ..+...      +.......           +.-...+
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di-~vvaInd~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~v~g~~   72 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDM-KVIGVSKTRPDFEARMALKK------GYDLYVAIPERVKLFEKAGIEVAGTV   72 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSE-EEEEEEESSCSHHHHHHHHT------TCCEEESSGGGHHHHHHTTCCCCEEH
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCc-eEEEEecCCcHHHHHHHHhc------CCceEecccccceeecccCcccCCCh
Confidence            67999998 5999999999998876 5 777664322211  111121      11111111           1111245


Q ss_pred             HHHhcCccEEEEcccCC
Q 020110           75 SRAVEGCKGVFHVASPC   91 (331)
Q Consensus        75 ~~~~~~~d~vih~a~~~   91 (331)
                      ..+++++|+||-|.|..
T Consensus        73 ~~~~~~vDvViEcTG~f   89 (171)
T d1cf2o1          73 DDMLDEADIVIDCTPEG   89 (171)
T ss_dssp             HHHHHTCSEEEECCSTT
T ss_pred             hHhhcCCCEEEEccCCC
Confidence            55667899999998863

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.44  E-value=0.027  Score=45.63  Aligned_cols=34  Identities=15%  Similarity=0.125  Sum_probs=30.5

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      |..|+|+|| |+-|..++++|.+.|+ +|.++.+++
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            568999998 9999999999999999 999997754

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.39  E-value=0.041  Score=44.21  Aligned_cols=33  Identities=24%  Similarity=0.246  Sum_probs=30.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      |||+|+|| |.-|-..+.+|.+.|+ +|+++.+++
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            78999998 9999999999999999 999997643

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.37  E-value=0.035  Score=44.49  Aligned_cols=33  Identities=18%  Similarity=0.153  Sum_probs=29.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      |+|+|+|| |.-|...+.+|.++|+ +|+++.+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~-~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGT-DAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            47999998 9999999999999999 999997654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.25  E-value=0.059  Score=38.76  Aligned_cols=35  Identities=11%  Similarity=0.072  Sum_probs=28.7

Q ss_pred             CeEEEe-CcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110           10 ETVCVT-GANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus        10 ~~vlVt-GatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      ++++|. .+.||+|..++..|.+.|+ +|+.+.+.+.
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~~   75 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVHL   75 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSCT
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCc
Confidence            466665 2449999999999999999 9999987653

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.11  E-value=0.049  Score=40.90  Aligned_cols=33  Identities=24%  Similarity=0.089  Sum_probs=28.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC--CCEEEEEecCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPG   44 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~~   44 (331)
                      |||+|.|| |++|-.++..|.+.+  . +|+.+.|+.
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~-~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDA-EIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTS-EEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCC-eEEEEeCCC
Confidence            48999998 999999999998864  5 888887754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.05  E-value=0.072  Score=41.15  Aligned_cols=35  Identities=23%  Similarity=0.447  Sum_probs=31.5

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      +.++|+|+|| |+.|-..+..|.+.|+ +|+++.++.
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~-~v~l~E~~~   82 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGY-TVHLTDTAE   82 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhcc-ceeeEeecc
Confidence            4579999998 9999999999999999 999997654

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=92.88  E-value=0.092  Score=38.39  Aligned_cols=31  Identities=16%  Similarity=0.255  Sum_probs=24.4

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCCEEEEEec
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVF   42 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r   42 (331)
                      .||.|.| +|++|+.+++.|.+. +. +++++..
T Consensus         4 irvgiiG-~G~ig~~~~~~l~~~~~~-elvav~~   35 (170)
T d1f06a1           4 IRVAIVG-YGNLGRSVEKLIAKQPDM-DLVGIFS   35 (170)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTCSSE-EEEEEEE
T ss_pred             ceEEEEC-ChHHHHHHHHHHHhCCCc-EEEEEEe
Confidence            3799999 599999999999875 56 6666543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=92.86  E-value=0.0032  Score=46.80  Aligned_cols=115  Identities=10%  Similarity=0.035  Sum_probs=63.5

Q ss_pred             CeEEEeCcchHHHHH--HHHHHHHC----CCCEEEEEecCCCccchhhcC----CCCCCCcEEEEEccCCCchHHHHHhc
Q 020110           10 ETVCVTGANGFIGTW--LVKTLLDN----NYTSINATVFPGSDSSHLFAL----PGAGDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus        10 ~~vlVtGatG~iG~~--l~~~L~~~----g~~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      |||.|.|| |.+|..  ++..|+..    +. +++.+++++.........    ....+...++.     ...+.++.++
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~-eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~-----~~td~~eaL~   75 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGS-TVTLMDIDEERLDAILTIAKKYVEEVGADLKFE-----KTMNLDDVII   75 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEE-----EESCHHHHHT
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCC-EEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEE-----EeCChhhccc
Confidence            48999997 888865  34445543    34 899998875432211100    00000022221     1234567889


Q ss_pred             CccEEEEcccCCCCCC-------------------CC-----CchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           80 GCKGVFHVASPCTLED-------------------PV-----DPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~-------------------~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      ++|+|+..++......                   ..     .........|+...+.+++..++...+.++..-|
T Consensus        76 dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          76 DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            9999999876532100                   00     0001113458888888999888887665554443

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.80  E-value=0.1  Score=37.54  Aligned_cols=69  Identities=10%  Similarity=0.051  Sum_probs=50.3

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      ..|+++|.|= |++|+-+++.|...|. +|+++..+|-.  .++....    +.+        ...++++++..|+||-.
T Consensus        22 aGk~vvV~GY-G~vGrG~A~~~rg~Ga-~V~V~E~DPi~--alqA~md----Gf~--------v~~~~~a~~~aDi~vTa   85 (163)
T d1v8ba1          22 SGKIVVICGY-GDVGKGCASSMKGLGA-RVYITEIDPIC--AIQAVME----GFN--------VVTLDEIVDKGDFFITC   85 (163)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHHTC-EEEEECSCHHH--HHHHHTT----TCE--------ECCHHHHTTTCSEEEEC
T ss_pred             cCCEEEEecc-cccchhHHHHHHhCCC-EEEEEecCchh--hHHHHhc----CCc--------cCchhHccccCcEEEEc
Confidence            4579999996 9999999999999999 99999776632  2222211    222        23466888999999987


Q ss_pred             ccCCC
Q 020110           88 ASPCT   92 (331)
Q Consensus        88 a~~~~   92 (331)
                      .|-..
T Consensus        86 TGn~~   90 (163)
T d1v8ba1          86 TGNVD   90 (163)
T ss_dssp             CSSSS
T ss_pred             CCCCc
Confidence            76543

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.80  E-value=0.059  Score=43.83  Aligned_cols=35  Identities=17%  Similarity=0.209  Sum_probs=31.1

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      +-|+|+|+|| |..|-..+..|.++|+ +|+++.+++
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            3479999998 9999999999999999 999997654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.80  E-value=0.063  Score=39.57  Aligned_cols=33  Identities=18%  Similarity=0.316  Sum_probs=27.4

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (331)
                      .++|+|.|| |++|-.++..|.+.|. +|..+.+.
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~-~v~v~~~~   35 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGW-EGNIRLVG   35 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEEC
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCC-ceEEEEec
Confidence            358999998 9999999999999998 66655443

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=92.48  E-value=0.093  Score=35.62  Aligned_cols=34  Identities=9%  Similarity=0.114  Sum_probs=28.1

Q ss_pred             CeEEEeCcchHHHHHHHHHHHH---CCCCEEEEEecCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLD---NNYTSINATVFPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~---~g~~~V~~~~r~~~   45 (331)
                      ++++|.|| |++|-.++..|.+   .|. +|+.+.|.+.
T Consensus        19 ~~v~IiGg-G~ig~E~A~~l~~~~~~g~-~Vtli~~~~~   55 (117)
T d1feca2          19 KRALCVGG-GYISIEFAGIFNAYKARGG-QVDLAYRGDM   55 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHSCTTC-EEEEEESSSS
T ss_pred             CeEEEECC-ChHHHHHHHHhHhhccccc-ccceeccccc
Confidence            68999998 9999999976654   478 9999987653

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.31  E-value=0.28  Score=35.76  Aligned_cols=74  Identities=15%  Similarity=0.144  Sum_probs=44.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCC-CCEEEEEec-CCCcc-chhhcCCCCCCCcEEEEEccC-----------CCchHHH
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNN-YTSINATVF-PGSDS-SHLFALPGAGDANLRVFEADV-----------LDSGAVS   75 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r-~~~~~-~~~~~~~~~~~~~~~~~~~Dl-----------~~~~~~~   75 (331)
                      +||.|-|- |-||+.+++.|+++. . +|+++.- ++... ..+.+.      +...+..+-           .....+.
T Consensus         3 irIaINGf-GRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (172)
T d2czca2           3 VKVGVNGY-GTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKEL------GIPVYAASEEFIPRFEKEGFEVAGTLN   74 (172)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHT------TCCEEESSGGGHHHHHHHTCCCSCBHH
T ss_pred             EEEEEECC-CHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhc------CceeecccccceeeecccCccccchhh
Confidence            58999995 999999999998865 5 7666542 22211 112221      122222221           1123455


Q ss_pred             HHhcCccEEEEcccCC
Q 020110           76 RAVEGCKGVFHVASPC   91 (331)
Q Consensus        76 ~~~~~~d~vih~a~~~   91 (331)
                      .+.+++|+|+-|.|.+
T Consensus        75 ~~~~~vDvViEcTG~f   90 (172)
T d2czca2          75 DLLEKVDIIVDATPGG   90 (172)
T ss_dssp             HHHTTCSEEEECCSTT
T ss_pred             hhhccCCEEEECCCCC
Confidence            5567899999998864

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.22  E-value=0.31  Score=38.71  Aligned_cols=33  Identities=21%  Similarity=0.152  Sum_probs=29.2

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEe
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV   41 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~   41 (331)
                      .+.++|+|-|- |-+|+++++.|.+.|. .|++++
T Consensus        34 L~gktvaIqGf-GnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          34 FGDKTFAVQGF-GNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEE
Confidence            35679999997 9999999999999999 888775

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.07  E-value=0.091  Score=36.86  Aligned_cols=35  Identities=17%  Similarity=0.230  Sum_probs=28.3

Q ss_pred             CCeEEEeCcchHHHHHHHHHHH----HCCCCEEEEEecCCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLL----DNNYTSINATVFPGS   45 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~----~~g~~~V~~~~r~~~   45 (331)
                      .++++|.|| ||+|-.++..|.    +.|. +|+.+.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~-~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGT-EVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCC-EEEEeccccc
Confidence            468999998 999999998885    4588 9998876543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.98  E-value=0.049  Score=42.01  Aligned_cols=71  Identities=20%  Similarity=0.102  Sum_probs=46.3

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      .+.++|+|-|- |-+|+++++.|.+.|. .|++.+.+...........     +...     .+.+++  .-.++|+++-
T Consensus        37 l~g~~v~IqG~-GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~-----g~~~-----~~~~~~--~~~~cDIl~P  102 (230)
T d1leha1          37 LEGLAVSVQGL-GNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEE-----GADA-----VAPNAI--YGVTCDIFAP  102 (230)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH-----CCEE-----CCGGGT--TTCCCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhc-----CCcc-----cCCccc--ccccccEecc
Confidence            45689999996 9999999999999999 8888765443322222211     1222     222222  1236899999


Q ss_pred             cccCC
Q 020110           87 VASPC   91 (331)
Q Consensus        87 ~a~~~   91 (331)
                      ||-..
T Consensus       103 cA~~~  107 (230)
T d1leha1         103 CALGA  107 (230)
T ss_dssp             CSCSC
T ss_pred             ccccc
Confidence            98643

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.82  E-value=0.085  Score=42.39  Aligned_cols=33  Identities=24%  Similarity=0.422  Sum_probs=29.1

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      +|+|+|| |.+|..++.+|.++|..+|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            7999998 99999999999999953699998764

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.81  E-value=0.098  Score=35.56  Aligned_cols=34  Identities=15%  Similarity=0.128  Sum_probs=27.3

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC---CCCEEEEEecCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN---NYTSINATVFPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~---g~~~V~~~~r~~~   45 (331)
                      ++++|.|| |++|-.++..|.+.   |. +|+.+.|.+.
T Consensus        21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~-~Vtli~~~~~   57 (117)
T d1aoga2          21 RRVLTVGG-GFISVEFAGIFNAYKPKDG-QVTLCYRGEM   57 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHCCTTC-EEEEEESSSS
T ss_pred             CeEEEECC-cHHHHHHHHHhhhcccCCc-EEEEEeccch
Confidence            68999998 99999999766653   55 8999887543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.72  E-value=0.12  Score=42.08  Aligned_cols=34  Identities=15%  Similarity=0.175  Sum_probs=30.2

Q ss_pred             CCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC
Q 020110            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (331)
Q Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (331)
                      +.+||+|+|| |.-|-..+..|.++|+ +|+++-++
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~-~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGM-DVTLLEAR   37 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCC-CEEEEeCC
Confidence            3468999998 9999999999999999 99998654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.52  E-value=0.095  Score=41.53  Aligned_cols=31  Identities=23%  Similarity=0.072  Sum_probs=28.5

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      |+|+|| |..|..++.+|.++|+ +|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~-~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGV-KTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTC-CEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            899998 9999999999999999 999998753

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.28  E-value=0.11  Score=37.51  Aligned_cols=31  Identities=26%  Similarity=0.265  Sum_probs=26.5

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      ||+|.|| |++|-.++..|. ++. +|+++.|.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~-~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTY-EVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTS-EEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCC-CEEEEeccc
Confidence            7999998 999999999884 577 999987643

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.19  E-value=0.1  Score=40.23  Aligned_cols=31  Identities=19%  Similarity=0.089  Sum_probs=28.5

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      |+|+|| |.-|...+..|.++|+ +|.++.+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            799997 9999999999999999 999998764

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=91.02  E-value=0.39  Score=33.43  Aligned_cols=32  Identities=19%  Similarity=0.321  Sum_probs=27.9

Q ss_pred             CCeEEEeCcc---hHHHHHHHHHHHHCCCCEEEEEe
Q 020110            9 EETVCVTGAN---GFIGTWLVKTLLDNNYTSINATV   41 (331)
Q Consensus         9 ~~~vlVtGat---G~iG~~l~~~L~~~g~~~V~~~~   41 (331)
                      -|+|.|+|+|   +-.|..+++.|++.|+ .++.+.
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~-~~~~v~   47 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGY-RVLPVN   47 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTC-EEEEEC
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCC-CceEEE
Confidence            3689999998   6799999999999999 888763

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.99  E-value=0.28  Score=36.88  Aligned_cols=75  Identities=16%  Similarity=0.169  Sum_probs=42.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccch------hhcCCCCCCCcEEEEE-ccCCCchHHHHHhc--C
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH------LFALPGAGDANLRVFE-ADVLDSGAVSRAVE--G   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~--~   80 (331)
                      |||+|+|. +-.|..+++.|++.|+ +|.++.-.+.....      +.......  ++.++. .++.+++.+ +.+.  +
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~-~I~~Vvt~~~~~~~~~~~~~~~~~a~~~--~i~~~~~~~~~~~~~~-~~i~~~~   75 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGY-EISAIFTHTDNPGEKAFYGSVARLAAER--GIPVYAPDNVNHPLWV-ERIAQLS   75 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTC-EEEEEECCCC------CCCCHHHHHHHH--TCCEECCSCCCSHHHH-HHHHHTC
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCC-CEEEEEcCCCCCCcccccCHHHHHHHHc--CCcceecccccchhhh-hhhhhhc
Confidence            47888865 5579999999999999 88766533222110      00000001  455554 455554443 4443  5


Q ss_pred             ccEEEEccc
Q 020110           81 CKGVFHVAS   89 (331)
Q Consensus        81 ~d~vih~a~   89 (331)
                      +|.+|....
T Consensus        76 ~Dlii~~g~   84 (203)
T d2blna2          76 PDVIFSFYY   84 (203)
T ss_dssp             CSEEEEESC
T ss_pred             ccceeeeec
Confidence            898887654

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.97  E-value=0.019  Score=44.64  Aligned_cols=27  Identities=30%  Similarity=0.304  Sum_probs=23.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEE
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSIN   38 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~   38 (331)
                      |||+|+|| |.+|...+.+|.++|+ +|+
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~-~v~   27 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYH-SVL   27 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHT-TTS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCC-Cce
Confidence            48999998 9999999999999997 543

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.94  E-value=0.2  Score=35.84  Aligned_cols=35  Identities=20%  Similarity=0.084  Sum_probs=30.0

Q ss_pred             CCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      .++|+|+|| |.+|--.+..+++.|...|+.+.|..
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            358999998 99999999999999975788887754

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.64  E-value=0.17  Score=39.68  Aligned_cols=35  Identities=14%  Similarity=0.122  Sum_probs=29.9

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      ++|+|+|| |.-|..++..|.+.|...|+++.|++.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            38999998 999999999999999428888887654

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.47  E-value=0.58  Score=37.17  Aligned_cols=29  Identities=17%  Similarity=0.162  Sum_probs=25.0

Q ss_pred             cchHHHHHHHHHHHHCCCCEEEEEecCCCc
Q 020110           17 ANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (331)
Q Consensus        17 atG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (331)
                      .||-.|.+|++.|+..|+ +|+.+.+..+.
T Consensus        44 SSGk~G~alA~~~~~~Ga-~V~li~g~~s~   72 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGY-GVLFLYRARSA   72 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTC-EEEEEEETTSC
T ss_pred             CchHHHHHHHHHHHHcCC-EEEEEecCCcc
Confidence            469999999999999999 99999875443

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=89.94  E-value=0.74  Score=33.21  Aligned_cols=30  Identities=20%  Similarity=0.265  Sum_probs=25.5

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEe
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATV   41 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~   41 (331)
                      +||.|=|- |-||+.+.+.|.+.+. +|+++.
T Consensus         1 ikigINGf-GRIGR~~~R~l~~~~i-~iv~IN   30 (168)
T d2g82a1           1 MKVGINGF-GRIGRQVFRILHSRGV-EVALIN   30 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-CEEEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHhcCCC-EEEEEC
Confidence            37888885 9999999999999998 887764

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=89.91  E-value=0.17  Score=40.66  Aligned_cols=33  Identities=30%  Similarity=0.437  Sum_probs=29.9

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (331)
                      .|+|+|| |+-|-..+.+|.+.|. +|+++.+.+.
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~-~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGR-SVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCC-CEEEEEcCCC
Confidence            6999998 9999999999999999 9999987543

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.85  E-value=0.094  Score=38.67  Aligned_cols=30  Identities=33%  Similarity=0.366  Sum_probs=24.8

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEe
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATV   41 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~   41 (331)
                      .+|+|.|| |++|-.++..|.+.|. +|..+.
T Consensus         4 a~VvIIGg-G~~G~e~A~~l~~~g~-~v~i~~   33 (183)
T d1d7ya1           4 APVVVLGA-GLASVSFVAELRQAGY-QGLITV   33 (183)
T ss_dssp             SSEEEECC-SHHHHHHHHHHHHHTC-CSCEEE
T ss_pred             CCEEEECc-cHHHHHHHHHHHhcCC-ceEEEE
Confidence            47999997 9999999999999987 544443

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.62  E-value=2.3  Score=31.72  Aligned_cols=95  Identities=15%  Similarity=0.141  Sum_probs=60.0

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEE--EEEecCCCccchhhcCCCCCCCcEEEEEccC-------------------
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSI--NATVFPGSDSSHLFALPGAGDANLRVFEADV-------------------   68 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V--~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-------------------   68 (331)
                      .+|.|+|- |.-|..++.+|.+.|...|  +++.-+.   +.+.....    ..+...+.-                   
T Consensus        16 ~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~---~~L~~~~~----~~ki~ig~~~t~g~Gag~~p~~g~~aa~   87 (209)
T d2vapa1          16 AKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDA---QQLIRTKA----DKKILIGKKLTRGLGAGGNPKIGEEAAK   87 (209)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBH---HHHHTSCC----SEEEECCTTTTTTBCCTTCHHHHHHHHH
T ss_pred             CcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCH---HHHhcCCc----chhcccccccccccccccchHHHHHHHH
Confidence            58999996 8899999999999875334  4443322   22222111    222222221                   


Q ss_pred             CCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC
Q 020110           69 LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR  124 (331)
Q Consensus        69 ~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  124 (331)
                      .+.+.+.+.++++|.||-+||.....            -..++--+.+.+++.+..
T Consensus        88 e~~~~I~~~l~~~d~vfi~AGlGGGT------------Gsgaapvia~~ake~g~l  131 (209)
T d2vapa1          88 ESAEEIKAAIQDSDMVFITCGLGGGT------------GTGSAPVVAEISKKIGAL  131 (209)
T ss_dssp             HTHHHHHHHHTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHhccCCCEEEEEEeCCCCc------------cccHHHHHHHHHHHcCCc
Confidence            12357778889999999999986641            123445688899998754

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.47  E-value=0.099  Score=38.50  Aligned_cols=41  Identities=17%  Similarity=0.171  Sum_probs=31.9

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchh
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~   50 (331)
                      .+.|+|+|.|+ |..++.++..|.+.|  +|+++.|+......+
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~--~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN--NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS--EEEEECSSHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc--ceeeehhhhhHHHHH
Confidence            45789999997 778999999986554  899998986654433

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.44  E-value=0.19  Score=39.05  Aligned_cols=34  Identities=26%  Similarity=0.254  Sum_probs=29.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      .+|+|+|| |.-|...+.+|.++|+.+|+++.+++
T Consensus         1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            37999998 99999999999999952699987754

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=88.88  E-value=0.11  Score=37.41  Aligned_cols=35  Identities=34%  Similarity=0.516  Sum_probs=23.2

Q ss_pred             CeEEEeCcchHHHHHH-HHHHHHCCCCEEEEEe-cCCC
Q 020110           10 ETVCVTGANGFIGTWL-VKTLLDNNYTSINATV-FPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l-~~~L~~~g~~~V~~~~-r~~~   45 (331)
                      .||.|.| +|.+|+.+ .+.|.+....+++++. |+..
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~   41 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA   41 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence            5899999 89999865 4555444432677764 4443

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=88.88  E-value=2  Score=31.65  Aligned_cols=95  Identities=14%  Similarity=0.110  Sum_probs=60.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHCCCC--EEEEEecCCCccchhhcCCCCCCCcEEEEEccC-------------------
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEADV-------------------   68 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-------------------   68 (331)
                      +||.|+|- |.-|..++.+|.+.+..  +.+++.-+   .+.+.....    ..+...+.-                   
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD---~~~L~~~~a----~~ki~iG~~~t~G~G~g~~p~~g~~aa~   72 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTD---LQVLEASNA----DVKIQIGENITRGLGAGGRPEIGEQAAL   72 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESC---HHHHHTCCC----SEEEECCTTTTTTSCCTTCHHHHHHHHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCC---HHHHhcCCc----ceEEecccccCCCcccccCchhhHhHHH
Confidence            37889997 88999999999997743  33444332   222322211    222222211                   


Q ss_pred             CCchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC
Q 020110           69 LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR  124 (331)
Q Consensus        69 ~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  124 (331)
                      .+.+.+.+.++++|.||-+|+.....            -..++--+.+.|++.+..
T Consensus        73 e~~~~I~~~l~~~d~vfi~AGlGGgT------------GtgaapviA~~ake~g~l  116 (194)
T d1w5fa1          73 ESEEKIREVLQDTHMVFITAGFGGGT------------GTGASPVIAKIAKEMGIL  116 (194)
T ss_dssp             HTHHHHHHHTTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHhcCCCeEEEEEecCCCc------------ccchHHHHHHHHHHcCCc
Confidence            13456778888999999999987641            123455688899998853

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.45  E-value=0.38  Score=37.16  Aligned_cols=33  Identities=27%  Similarity=0.377  Sum_probs=29.1

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEe
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV   41 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~   41 (331)
                      .+.++|+|-|- |-+|+++++.|.+.|. .|++++
T Consensus        29 l~g~~v~IqGf-GnVG~~~a~~L~~~Ga-kvv~vs   61 (242)
T d1v9la1          29 IEGKTVAIQGM-GNVGRWTAYWLEKMGA-KVIAVS   61 (242)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTC-EEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC-eEEEee
Confidence            45689999985 9999999999999999 888775

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.72  E-value=1.7  Score=31.16  Aligned_cols=117  Identities=10%  Similarity=0.046  Sum_probs=61.4

Q ss_pred             CeEEEeCc-chHHHHHHHHHHHHCC---CCEEEEEecCCCc--cchhhcCC----CCCCCcEEEEEccCCCchHHHHHhc
Q 020110           10 ETVCVTGA-NGFIGTWLVKTLLDNN---YTSINATVFPGSD--SSHLFALP----GAGDANLRVFEADVLDSGAVSRAVE   79 (331)
Q Consensus        10 ~~vlVtGa-tG~iG~~l~~~L~~~g---~~~V~~~~r~~~~--~~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (331)
                      +||.|.|| +.+.+..++..+....   ..++..++.++..  ...+....    ...+.+++.  ..-   .+..+.++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~--~~~---td~~~al~   76 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEI--HLT---LDRRRALD   76 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEE--EEE---SCHHHHHT
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCcee--eec---CCchhhcC
Confidence            47899997 3344555555454432   1278888776532  11111100    000001111  111   23456788


Q ss_pred             CccEEEEcccCCCCCCCCC------------------chhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           80 GCKGVFHVASPCTLEDPVD------------------PEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        80 ~~d~vih~a~~~~~~~~~~------------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                      ++|+||..|+......+..                  ........|+...+.+++...+...+.++.+-|
T Consensus        77 gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          77 GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            9999999998643110000                  001223467778888888888887666666554

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.35  E-value=0.38  Score=38.95  Aligned_cols=31  Identities=26%  Similarity=0.288  Sum_probs=28.3

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      |+|+|| |.-|-..+.+|.++|+ +|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            789998 9999999999999999 999997654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.07  E-value=0.4  Score=36.87  Aligned_cols=34  Identities=15%  Similarity=0.001  Sum_probs=30.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (331)
                      -|+|+|| |..|...+..|.+.|+ +|+++.+++..
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~-~V~liEk~~~~   37 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGA-NVLLLDKGNKL   37 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC-cEEEEeCCCCC
Confidence            4899998 9999999999999999 99999876543

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=85.53  E-value=0.39  Score=39.46  Aligned_cols=31  Identities=13%  Similarity=0.063  Sum_probs=28.4

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (331)
                      -|+|+|+ |+-|..++.+|.++|+ +|.++-+.
T Consensus         4 ~VIVVGs-G~aG~v~A~rLaeaG~-~VlvLEaG   34 (367)
T d1n4wa1           4 PAVVIGT-GYGAAVSALRLGEAGV-QTLMLEMG   34 (367)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             eEEEeCc-CHHHHHHHHHHHHCcC-eEEEEecC
Confidence            4889997 9999999999999999 99999885

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=84.67  E-value=0.5  Score=36.73  Aligned_cols=33  Identities=18%  Similarity=0.077  Sum_probs=29.0

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEe
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV   41 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~   41 (331)
                      .+.++|+|-|- |-+|+++++.|.+.|. .|++++
T Consensus        34 l~g~~v~IQGf-GnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          34 LVGKTVALAGF-GNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             STTCEEEECCS-SHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC-eEEEEe
Confidence            45689999995 9999999999999999 888764

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.56  E-value=0.51  Score=35.79  Aligned_cols=34  Identities=21%  Similarity=0.345  Sum_probs=29.2

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC--CCCEEEEEecCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~   45 (331)
                      +||.|+|| |.-|...+.+|.++  |+ +|+++.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~-~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRA-HVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSC-EEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence            48999998 99999999999875  78 9999977653

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.34  E-value=1.2  Score=32.37  Aligned_cols=34  Identities=15%  Similarity=0.062  Sum_probs=25.7

Q ss_pred             CeEEEeCcchHHHHHHHHHHHHC-CCCEEEEE-ecCCC
Q 020110           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINAT-VFPGS   45 (331)
Q Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~-~r~~~   45 (331)
                      .||.|.|. |.+|+..++.|... +. +|+++ ++++.
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~-~i~ai~d~~~~   37 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNA-TISGVASRSLE   37 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTE-EEEEEECSSHH
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCC-EEEEEEeCCcc
Confidence            38999995 89999999999876 56 77765 44443

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.17  E-value=2.4  Score=32.23  Aligned_cols=33  Identities=21%  Similarity=0.273  Sum_probs=27.3

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHH-CCCCEEEEEe
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLD-NNYTSINATV   41 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~-~g~~~V~~~~   41 (331)
                      .+.++|+|-| .|-+|+++++.|.+ .|. .|++++
T Consensus        29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQG-FGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             TTTCEEEEEC-CSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCC-ceEEee
Confidence            4567999998 59999999999975 598 888765

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=84.14  E-value=1.6  Score=30.94  Aligned_cols=65  Identities=14%  Similarity=0.198  Sum_probs=37.8

Q ss_pred             CeEEEeCcchHHHHH-HHHHHHHC-CCCEEEEEe-cCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEE
Q 020110           10 ETVCVTGANGFIGTW-LVKTLLDN-NYTSINATV-FPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (331)
Q Consensus        10 ~~vlVtGatG~iG~~-l~~~L~~~-g~~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   86 (331)
                      +||.|.|. |.+|+. .+..|... +. +|+++. +++.......+..     ++     +.  .+.++.+++++|+|+-
T Consensus         2 iri~iIG~-G~~g~~~~~~~l~~~~~~-~i~~v~d~~~~~~~~~~~~~-----~~-----~~--~~~~~~l~~~~D~V~I   67 (164)
T d1tlta1           2 LRIGVVGL-GGIAQKAWLPVLAAASDW-TLQGAWSPTRAKALPICESW-----RI-----PY--ADSLSSLAASCDAVFV   67 (164)
T ss_dssp             EEEEEECC-STHHHHTHHHHHHSCSSE-EEEEEECSSCTTHHHHHHHH-----TC-----CB--CSSHHHHHTTCSEEEE
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHhCCCc-EEEEEEechhHhhhhhhhcc-----cc-----cc--cccchhhhhhcccccc
Confidence            48999995 999975 46666554 56 666554 5554433332211     11     12  2235556688999885


Q ss_pred             cc
Q 020110           87 VA   88 (331)
Q Consensus        87 ~a   88 (331)
                      +.
T Consensus        68 ~t   69 (164)
T d1tlta1          68 HS   69 (164)
T ss_dssp             CS
T ss_pred             cc
Confidence            53

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=84.09  E-value=0.47  Score=38.46  Aligned_cols=34  Identities=18%  Similarity=0.227  Sum_probs=28.7

Q ss_pred             eEEEeCcchHHHHHHHHHHH-----HCCCCEEEEEecCCCc
Q 020110           11 TVCVTGANGFIGTWLVKTLL-----DNNYTSINATVFPGSD   46 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~-----~~g~~~V~~~~r~~~~   46 (331)
                      -|+|+|| |..|..++..|.     +.|+ +|+++.|++..
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~-~v~vlEr~~~~   47 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDL-KVRIIDKRSTK   47 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTC-CEEEECSSSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCC-cEEEEcCCCCC
Confidence            3899998 999999999996     4799 99999876543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=84.05  E-value=0.026  Score=41.32  Aligned_cols=76  Identities=12%  Similarity=0.050  Sum_probs=40.6

Q ss_pred             CeEEEeCcchHHHHH-HHHHHHHC--C--CCEEEEEecCCCccchhhcC----CCCCCCcEEEEEccCCCchHHHHHhcC
Q 020110           10 ETVCVTGANGFIGTW-LVKTLLDN--N--YTSINATVFPGSDSSHLFAL----PGAGDANLRVFEADVLDSGAVSRAVEG   80 (331)
Q Consensus        10 ~~vlVtGatG~iG~~-l~~~L~~~--g--~~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (331)
                      .||.|.|| |.+|.. ++..|+..  .  ..+|+..+.++.........    ....+...+...     ..+..+.+++
T Consensus         4 ~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~eal~~   77 (167)
T d1u8xx1           4 FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEAFTD   77 (167)
T ss_dssp             EEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHHHSS
T ss_pred             ceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-----cCChhhccCC
Confidence            47999998 445543 44455542  1  12788888765443211110    000000122211     1235577899


Q ss_pred             ccEEEEcccCC
Q 020110           81 CKGVFHVASPC   91 (331)
Q Consensus        81 ~d~vih~a~~~   91 (331)
                      +|+||..++..
T Consensus        78 AD~Vvitag~~   88 (167)
T d1u8xx1          78 VDFVMAHIRVG   88 (167)
T ss_dssp             CSEEEECCCTT
T ss_pred             CCEEEECCCcC
Confidence            99999999863

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=83.73  E-value=0.52  Score=31.10  Aligned_cols=36  Identities=22%  Similarity=0.075  Sum_probs=28.4

Q ss_pred             cCCCeEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      ...|+|+|.|+ |.-|.-++..|...+- +|+...|+.
T Consensus        30 f~gK~VlVVG~-g~Sa~dia~~l~~~ak-~v~~~~~r~   65 (107)
T d2gv8a2          30 FVGESVLVVGG-ASSANDLVRHLTPVAK-HPIYQSLLG   65 (107)
T ss_dssp             GTTCCEEEECS-SHHHHHHHHHHTTTSC-SSEEEECTT
T ss_pred             cCCCeEEEECC-CCCHHHHHHHHHHhcC-EEEEEEecC
Confidence            35689999997 8999999999988776 555555543

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.32  E-value=0.27  Score=37.69  Aligned_cols=77  Identities=14%  Similarity=0.099  Sum_probs=56.0

Q ss_pred             CCeEEEeC-cchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEc
Q 020110            9 EETVCVTG-ANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (331)
Q Consensus         9 ~~~vlVtG-atG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   87 (331)
                      +.+||=.| |+|+.-++|++..-..|  .|++++.++.....+.+.....+ ++..+.+|..+++........+|+|++.
T Consensus        74 G~~VLDlGaGsG~~t~~la~~VG~~G--~V~aVD~s~~~l~~a~~~a~~~~-~~~~i~~d~~~~~~~~~~~~~vD~i~~d  150 (227)
T d1g8aa_          74 GKSVLYLGIASGTTASHVSDIVGWEG--KIFGIEFSPRVLRELVPIVEERR-NIVPILGDATKPEEYRALVPKVDVIFED  150 (227)
T ss_dssp             TCEEEEETTTSTTHHHHHHHHHCTTS--EEEEEESCHHHHHHHHHHHSSCT-TEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred             CCEEEEeccCCCHHHHHHHHHhCCCC--EEEEEeCcHHHHHHHHHHHHhcC-CceEEEEECCCcccccccccceEEEEEE
Confidence            45788776 58999999998664555  89999887765555544433333 7889999999888776556678988875


Q ss_pred             c
Q 020110           88 A   88 (331)
Q Consensus        88 a   88 (331)
                      .
T Consensus       151 ~  151 (227)
T d1g8aa_         151 V  151 (227)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=82.45  E-value=0.84  Score=36.67  Aligned_cols=33  Identities=12%  Similarity=0.253  Sum_probs=22.6

Q ss_pred             CeEEEeC-cc-hHH--HHHHHHHHHHCCCCEEEEEecC
Q 020110           10 ETVCVTG-AN-GFI--GTWLVKTLLDNNYTSINATVFP   43 (331)
Q Consensus        10 ~~vlVtG-at-G~i--G~~l~~~L~~~g~~~V~~~~r~   43 (331)
                      |||+|++ || |.+  ...|+++|.++|| +|..+...
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~-eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGW-QVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTC-EEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCC-EEEEEEeC
Confidence            4677766 44 333  3358899999999 99877643

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.38  E-value=7.3  Score=28.49  Aligned_cols=94  Identities=19%  Similarity=0.147  Sum_probs=58.7

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCC--EEEEEecCCCccchhhcCCCCCCCcEEEEEcc-----------C--------C
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEAD-----------V--------L   69 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----------l--------~   69 (331)
                      +|.|.|- |.-|.+++.+|.+.+..  +.+++.-+...   +.....    ..+...++           .        .
T Consensus         3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~~~---L~~~~~----~~ki~iG~~~~~g~G~gg~p~~g~~aa~e   74 (198)
T d1ofua1           3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDAQA---LKNIAA----RTVLQLGPGVTKGLGAGANPEVGRQAALE   74 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBTGG---GSSCSC----SEEEECCHHHHTTBCCCSCHHHHHHHHHH
T ss_pred             eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcHHH---HhcCCc----cceeccccccccCCCCCCChHHHHHHHHH
Confidence            5778886 88999999999998753  44444433322   221110    22222221           1        1


Q ss_pred             CchHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCC
Q 020110           70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR  124 (331)
Q Consensus        70 ~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  124 (331)
                      +.+.+.+.+++.|.||-+||.....            -..++--+.+.|++.+..
T Consensus        75 ~~~~I~~~l~~~d~vfi~AGlGGGT------------GtgaapviA~~ake~g~l  117 (198)
T d1ofua1          75 DRERISEVLEGADMVFITTGMGGGT------------GTGAAPIIAEVAKEMGIL  117 (198)
T ss_dssp             THHHHHHHHTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHhCCCCeEEEEecCCCCc------------cccHHHHHHHHHHHcCCC
Confidence            4456778889999999999987641            123444588899998753

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=81.45  E-value=0.23  Score=40.91  Aligned_cols=96  Identities=14%  Similarity=0.041  Sum_probs=56.1

Q ss_pred             EEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCC-CCCcEEEEEccCCCchH-HHHHhcCccEEEEcccC
Q 020110           13 CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGA-VSRAVEGCKGVFHVASP   90 (331)
Q Consensus        13 lVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~-~~~~~~~~d~vih~a~~   90 (331)
                      =+.+|+|.+|-.|++    .+. +|+++..++.......+.... +-.+++++.+|..+.-. ........|+||--   
T Consensus       218 DLycG~G~fsl~La~----~~~-~V~gvE~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilD---  289 (358)
T d1uwva2         218 DLFCGMGNFTLPLAT----QAA-SVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD---  289 (358)
T ss_dssp             EESCTTTTTHHHHHT----TSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC---
T ss_pred             Eecccccccchhccc----ccc-EEEeccCcHHHHHHHHHhHHhcccccceeeecchhhhhhhhhhhhccCceEEeC---
Confidence            367899999988754    456 999998765554333321110 11178999999875321 11222347888732   


Q ss_pred             CCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Q 020110           91 CTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (331)
Q Consensus        91 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  131 (331)
                              +|+.-.       ..+++...+.+.+++||+|.
T Consensus       290 --------PPR~G~-------~~~~~~l~~~~~~~ivYVSC  315 (358)
T d1uwva2         290 --------PARAGA-------AGVMQQIIKLEPIRIVYVSC  315 (358)
T ss_dssp             --------CCTTCC-------HHHHHHHHHHCCSEEEEEES
T ss_pred             --------CCCccH-------HHHHHHHHHcCCCEEEEEeC
Confidence                    122211       12444444557899999994

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.34  E-value=0.75  Score=36.56  Aligned_cols=32  Identities=19%  Similarity=0.076  Sum_probs=29.0

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (331)
                      -|+|+|| |..|...+..|.++|. +|+++.+.+
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~-~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGA-KVILIEKEP   49 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC-cEEEEecCC
Confidence            3899998 9999999999999999 999997754

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=81.25  E-value=0.87  Score=35.06  Aligned_cols=34  Identities=18%  Similarity=0.087  Sum_probs=30.4

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (331)
                      .|+|+|| |--|...+..|.+.|+ +|.++.+++..
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~-~V~vlEk~~~~   39 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGK-SVTVFDNGKKI   39 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCC-cEEEEecCCCC
Confidence            5999998 9999999999999999 99999886543

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.18  E-value=6.8  Score=28.67  Aligned_cols=98  Identities=15%  Similarity=0.187  Sum_probs=58.9

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEcc-------------------CCCc
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD-------------------VLDS   71 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-------------------l~~~   71 (331)
                      +|-|+|- |--|.+++.++.+.+...|-.+.-+... ..+.....    ..+...+.                   ..+.
T Consensus         3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~-~~L~~~~~----~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~   76 (198)
T d1rq2a1           3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDA-QALLMSDA----DVKLDVGRDSTRGLGAGADPEVGRKAAEDAK   76 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCH-HHHHHCCC----SEEEECCTTTC-----CCCHHHHHHHHHHTH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchH-HHHhcCCc----chhhccccccccCCCcCcChhhhHhhHHHHH
Confidence            4567775 6679999999999875333333323322 22222111    22222221                   1245


Q ss_pred             hHHHHHhcCccEEEEcccCCCCCCCCCchhhhhHHHHHHHHHHHHHHHhCCCCEE
Q 020110           72 GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV  126 (331)
Q Consensus        72 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  126 (331)
                      +.+.+.+++.|.||-+||.....            -..++--+.+.|++.+.-.+
T Consensus        77 ~~I~~~l~~~d~vfi~AGlGGgT------------GtGaaPviA~iake~g~l~v  119 (198)
T d1rq2a1          77 DEIEELLRGADMVFVTAGEGGGT------------GTGGAPVVASIARKLGALTV  119 (198)
T ss_dssp             HHHHHHHTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHHTCEEE
T ss_pred             HHHHHHhcCCCEEEEEEecCCCC------------CcchHHHHHHHHHHcCCcEE
Confidence            67888889999999999987641            12345568889998875433

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=80.74  E-value=0.71  Score=37.81  Aligned_cols=31  Identities=16%  Similarity=0.200  Sum_probs=28.2

Q ss_pred             eEEEeCcchHHHHHHHHHHHHCCCCEEEEEecC
Q 020110           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (331)
                      -|+|+|+ |+-|..++.+|.++|+ +|.++-+.
T Consensus         9 dvIVVGs-G~aG~v~A~rLaeaG~-~VlvLEaG   39 (370)
T d3coxa1           9 PALVIGS-GYGGAVAALRLTQAGI-PTQIVEMG   39 (370)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC-eEEEEeCC
Confidence            4899997 9999999999999999 99999874

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=80.60  E-value=0.89  Score=33.94  Aligned_cols=30  Identities=10%  Similarity=-0.089  Sum_probs=27.4

Q ss_pred             EEEeCcchHHHHHHHHHHHHCCCCEEEEEecC
Q 020110           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (331)
Q Consensus        12 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (331)
                      |+|+|| |+.|...+.++.+.|. +|.++.++
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCC-EEEEEecc
Confidence            789998 9999999999999999 99988764

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=80.52  E-value=0.039  Score=39.60  Aligned_cols=61  Identities=16%  Similarity=0.110  Sum_probs=33.3

Q ss_pred             EEeCcchHHHHHHHHHHHHCCCCEEEEEecCCCccchhhcCCCCCCCcEEEEEccCCCchHHHHHhcCccEEEEcc
Q 020110           13 CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (331)
Q Consensus        13 lVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~a   88 (331)
                      -+.| +|.+|+++++.|.+.++ .+.+..|++.....+.+....       ...++      .++++++|+||-+.
T Consensus         3 gfIG-~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~-------~~~~~------~~~~~~~DiVil~v   63 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGG-------KAATL------EKHPELNGVVFVIV   63 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-------CCCSS------CCCCC---CEEECS
T ss_pred             EEEe-CcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccc-------cccch------hhhhccCcEEEEec
Confidence            3566 59999999998855444 445778887766665553211       11122      23456789888654

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.51  E-value=5.7  Score=28.29  Aligned_cols=29  Identities=21%  Similarity=0.400  Sum_probs=22.9

Q ss_pred             eEEEeCcchHHHHHHHHHHHHC---CCCEEEEEe
Q 020110           11 TVCVTGANGFIGTWLVKTLLDN---NYTSINATV   41 (331)
Q Consensus        11 ~vlVtGatG~iG~~l~~~L~~~---g~~~V~~~~   41 (331)
                      ||.|-| -|-||+.+.+.+++.   +. +|+++.
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i-~vvaIN   33 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDI-EVVAIN   33 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTC-EEEEEE
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCE-EEEEec
Confidence            678888 599999999999864   36 777653