BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020112
MDPSSSSVNGFYSSLTRGIDDLELVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLHL
PVGEKWLDEYMDESSKLWEACHVIKSGISGMETYCSAGFNITSSLDNHRHLTPQLSRQVI
RAISVCRREAAALEEENRALMETRIQALSLRFDEKVSIESKLNGFNGFRGVLYGMRNVSS
LLLMILLYGVVYCWPESNNFLGGGGGYEGRLCFGSAFMISTARLQERVAAEINQMSVSGC
GRQQQGVLLYEFRRSKMALDELRGELERKCGQGQMAVDWENEVGIRERVENLRGCFGVLR
SGAENIVGQLDDFFDEIVEGRKKLLDFCSHR

High Scoring Gene Products

Symbol, full name Information P value
AT1G22030 protein from Arabidopsis thaliana 3.2e-88
AT1G77855 protein from Arabidopsis thaliana 8.5e-81

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020112
        (331 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2030591 - symbol:AT1G22030 "AT1G22030" species...   881  3.2e-88   1
TAIR|locus:504956240 - symbol:AT1G77855 "AT1G77855" speci...   811  8.5e-81   1


>TAIR|locus:2030591 [details] [associations]
            symbol:AT1G22030 "AT1G22030" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AC069252 InterPro:IPR008511
            Pfam:PF05633 EMBL:BT008529 EMBL:AK118146 IPI:IPI00527642 PIR:C86353
            RefSeq:NP_564155.1 UniGene:At.41626 PRIDE:Q9LM58
            EnsemblPlants:AT1G22030.1 GeneID:838808 KEGG:ath:AT1G22030
            TAIR:At1g22030 InParanoid:Q9LM58 OMA:HEYRRSK PhylomeDB:Q9LM58
            ProtClustDB:CLSN2687905 ArrayExpress:Q9LM58 Genevestigator:Q9LM58
            Uniprot:Q9LM58
        Length = 333

 Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
 Identities = 195/343 (56%), Positives = 242/343 (70%)

Query:     1 MDPS-SSSVNGFYSSLTRGIDDLELVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 59
             MDPS ++SVNGFYS L R ++DLE VYLSNNFMS+ FLQR L LLR+ HS LTLLVQKL 
Sbjct:     1 MDPSCANSVNGFYSFLNRSMEDLERVYLSNNFMSVHFLQRALCLLRTSHSHLTLLVQKLQ 60

Query:    60 LPVGEKWLDEYMDESSKLWEACHVIKSGISGMETYCSAGFNITSSLDNHRHLTPQLSRQV 119
             LPVG+KWLDEYMDESSKLWEAC VIKS +S +E + SAG +I S+LD  R L+PQLSRQV
Sbjct:    61 LPVGDKWLDEYMDESSKLWEACLVIKSAVSSVENFSSAGISIASTLD--RRLSPQLSRQV 118

Query:   120 IRAISVCXXXXXXXXXXXXXXMETRIQALSLRFDEKVS---IES--KL-NGFNGFRGVLY 173
             IRAIS C              ME R+Q     + E+ S   +ES  KL NGF+GFRGVLY
Sbjct:   119 IRAISGCRREAIGIEEENRALMENRVQRFPF-WSEQTSATAMESSTKLQNGFSGFRGVLY 177

Query:   174 GMRNVSSLLLMILLYGVVYCWPESNNFLXXXXXYEGRLCFGSAFMISTARLQERVAAEIN 233
               RN+SSLLLM+L+ G+VYC+P            + +   G  F  +  RLQ+RVAAE+ 
Sbjct:   178 ATRNMSSLLLMVLMNGLVYCFPGDAATQTQTQITQTQSQVGG-FAGAMGRLQQRVAAEVG 236

Query:   234 QMSVSGCGRQQQGVLLYEFRRSKMALDELRGELERK-CGQG----QMAVDWENEVGIRER 288
             +M +      ++G+L++E+RRSK AL+EL+ ELER+ CG G    +   + E+E  +RER
Sbjct:   237 RMGI------RKGILMHEYRRSKAALEELKAELERRFCGGGGGGGEREEEEEDERELRER 290

Query:   289 VENLRGCFGVLRSGAENIVGQLDDFFDEIVEGRKKLLDFCSHR 331
             VENL+G FG LR+G E+IV Q+DDFFDEIVEGRKKLLDFCSHR
Sbjct:   291 VENLKGYFGNLRNGTESIVAQIDDFFDEIVEGRKKLLDFCSHR 333


>TAIR|locus:504956240 [details] [associations]
            symbol:AT1G77855 "AT1G77855" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002684 IPI:IPI00518500 RefSeq:NP_683505.1
            UniGene:At.50663 EnsemblPlants:AT1G77855.1 GeneID:844121
            KEGG:ath:AT1G77855 OMA:QISRQVI Uniprot:F4I8K1
        Length = 317

 Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
 Identities = 179/341 (52%), Positives = 238/341 (69%)

Query:     1 MDPS-SSSVNGFYSSLTRGIDDLELVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 59
             MD S S+SVNGFYS L R ++DLE VY+SNNFMS+QFLQRV+ LLR+ HS LTLLVQKL+
Sbjct:     1 MDQSCSNSVNGFYSFLNRSMEDLERVYISNNFMSLQFLQRVICLLRTSHSHLTLLVQKLN 60

Query:    60 LPVGEKWLDEYMDESSKLWEACHVIKSGISGMETYCSAGFNITSSLDNHRH----LTPQL 115
             LPVG+KWLD+YMDE+SKLW+ CHVIKS IS +E++CS+  +ITS+LD H H    L+PQ+
Sbjct:    61 LPVGDKWLDDYMDETSKLWDVCHVIKSAISTIESFCSSAISITSTLDGHYHHRRLLSPQI 120

Query:   116 SRQVIRAISVCXXXXXXXXXXXXXXMETRIQALSLRFDEKVSI----ESKL-NGFNGFRG 170
             SRQVIRAIS C              ME RIQ     + E+V+      SK+ NGF+GFRG
Sbjct:   121 SRQVIRAISGCRREAVGIEEENRALMENRIQRFPF-WSEQVTTTGMESSKIQNGFSGFRG 179

Query:   171 VLYGMRNVSSLLLMILLYGVVYCWPESNNFLXXXXXYEGRLCFGSAFMISTARLQERVAA 230
             V+  M+N++SLLL+IL+ G+VY  P             G     +  M+   RL++RVAA
Sbjct:   180 VMNTMKNINSLLLVILMQGLVYYIP-------------GDTTVPTGTMM---RLKQRVAA 223

Query:   231 EINQMSVSGCGRQQQGVLLYEFRRSKMALDELRGELERKCGQGQMAVDWENEVGIRERVE 290
             E+ ++ V      ++G+++YE+RRSK A++EL+ ELER+C  G    +   E G+RER+E
Sbjct:   224 EMERIGV------RKGMMMYEYRRSKTAMEELKVELERRCCGGG-GEEEAVEKGLRERIE 276

Query:   291 NLRGCFGVLRSGAENIVGQLDDFFDEIVEGRKKLLDFCSHR 331
             NL+G  G LR+G E+IV Q+DDFFD+IV+GRK LLD+CSHR
Sbjct:   277 NLKGSVGSLRNGTESIVAQIDDFFDDIVDGRKMLLDYCSHR 317


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.137   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      331       312   0.00080  116 3  11 22  0.49    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  214 KB (2118 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.41u 0.08s 24.49t   Elapsed:  00:00:02
  Total cpu time:  24.41u 0.08s 24.49t   Elapsed:  00:00:02
  Start:  Sat May 11 02:19:54 2013   End:  Sat May 11 02:19:56 2013

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