Query 020113
Match_columns 331
No_of_seqs 180 out of 2429
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 11:59:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020113.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020113hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3brk_X Glucose-1-phosphate ade 100.0 1.1E-48 3.7E-53 363.6 29.2 321 1-326 13-389 (420)
2 1yp2_A Glucose-1-phosphate ade 100.0 4.7E-47 1.6E-51 355.9 31.0 319 1-325 21-413 (451)
3 3st8_A Bifunctional protein GL 100.0 3.4E-43 1.2E-47 333.4 32.4 316 2-321 14-379 (501)
4 2ggo_A 401AA long hypothetical 100.0 5.1E-43 1.8E-47 323.8 28.0 303 1-326 1-329 (401)
5 1hm9_A GLMU, UDP-N-acetylgluco 100.0 3.3E-42 1.1E-46 324.6 28.9 305 2-322 13-354 (468)
6 4fce_A Bifunctional protein GL 100.0 9.5E-41 3.3E-45 313.9 27.8 306 1-324 9-351 (459)
7 2v0h_A Bifunctional protein GL 100.0 8.8E-40 3E-44 307.1 27.0 304 1-322 6-346 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 2.5E-37 8.6E-42 272.2 22.6 229 1-234 3-272 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 4.1E-36 1.4E-40 262.6 24.8 226 1-232 25-259 (269)
10 1tzf_A Glucose-1-phosphate cyt 100.0 4.8E-35 1.7E-39 254.6 27.3 228 1-233 3-251 (259)
11 2e3d_A UTP--glucose-1-phosphat 100.0 4.7E-34 1.6E-38 253.8 25.6 228 1-233 9-282 (302)
12 1mc3_A Glucose-1-phosphate thy 100.0 6.8E-34 2.3E-38 251.1 23.6 226 1-231 4-241 (296)
13 1lvw_A Glucose-1-phosphate thy 100.0 2E-33 6.7E-38 248.0 26.4 226 1-231 4-241 (295)
14 1fxo_A Glucose-1-phosphate thy 100.0 2.3E-33 7.8E-38 247.6 24.6 226 1-231 3-240 (293)
15 2ux8_A Glucose-1-phosphate uri 100.0 1E-33 3.5E-38 251.0 18.5 228 1-233 15-280 (297)
16 3pnn_A Conserved domain protei 100.0 7E-33 2.4E-37 245.9 21.2 223 1-234 6-293 (303)
17 2pa4_A UTP-glucose-1-phosphate 100.0 1.3E-32 4.6E-37 246.4 23.2 230 1-233 13-283 (323)
18 4evw_A Nucleoside-diphosphate- 100.0 1.2E-32 4.2E-37 238.2 16.8 216 3-229 2-244 (255)
19 2qh5_A PMI, ALGA, mannose-6-ph 100.0 2.2E-30 7.4E-35 230.5 14.9 222 1-229 5-281 (308)
20 3oam_A 3-deoxy-manno-octuloson 100.0 6.8E-28 2.3E-32 208.3 20.9 218 2-233 4-250 (252)
21 1jyk_A LICC protein, CTP:phosp 100.0 3.7E-28 1.3E-32 210.2 17.2 213 1-230 26-250 (254)
22 2x65_A Mannose-1-phosphate gua 100.0 3.8E-28 1.3E-32 217.9 12.1 219 1-226 2-270 (336)
23 2cu2_A Putative mannose-1-phos 99.9 3.2E-27 1.1E-31 212.0 10.9 218 1-228 3-267 (337)
24 3tqd_A 3-deoxy-manno-octuloson 99.9 3.3E-25 1.1E-29 191.0 21.0 212 2-228 11-254 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 3.9E-25 1.3E-29 191.4 19.2 214 1-229 19-262 (264)
26 4fcu_A 3-deoxy-manno-octuloson 99.9 3.7E-24 1.3E-28 184.2 19.1 215 2-231 3-249 (253)
27 2y6p_A 3-deoxy-manno-octuloson 99.9 6.7E-24 2.3E-28 181.4 19.6 208 2-229 4-230 (234)
28 1vic_A 3-deoxy-manno-octuloson 99.9 6.7E-23 2.3E-27 178.2 22.8 219 1-233 3-254 (262)
29 2xme_A CTP-inositol-1-phosphat 99.9 7.6E-24 2.6E-28 180.8 14.9 205 1-229 19-231 (232)
30 1h7e_A 3-deoxy-manno-octuloson 99.9 4.5E-22 1.5E-26 171.2 22.3 215 1-233 3-240 (245)
31 2icy_A Probable UTP-glucose-1- 99.9 2E-21 7E-26 179.4 19.0 314 1-320 80-469 (469)
32 3f1c_A Putative 2-C-methyl-D-e 99.9 4.9E-21 1.7E-25 164.7 15.9 218 2-234 5-236 (246)
33 1ezi_A CMP-N-acetylneuraminic 99.9 1.1E-20 3.7E-25 160.7 17.0 199 2-230 6-223 (228)
34 2vsh_A TARI, 2-C-methyl-D-eryt 99.9 1.3E-20 4.5E-25 161.0 17.5 215 1-230 3-233 (236)
35 2xwl_A 2-C-methyl-D-erythritol 99.8 2.6E-20 9E-25 157.8 15.3 208 1-231 3-219 (223)
36 2yc3_A 2-C-methyl-D-erythritol 99.8 5.7E-20 2E-24 156.3 14.0 211 2-230 6-224 (228)
37 1vgw_A 4-diphosphocytidyl-2C-m 99.8 2.6E-19 9E-24 152.4 17.6 210 1-229 7-227 (231)
38 2dpw_A Hypothetical protein TT 99.8 5E-21 1.7E-25 163.2 6.0 191 1-224 3-231 (232)
39 1qwj_A Cytidine monophospho-N- 99.8 1.8E-19 6.2E-24 153.3 14.9 199 2-232 5-222 (229)
40 3rsb_A Adenosylcobinamide-phos 99.8 3.1E-19 1.1E-23 148.1 13.7 183 1-230 1-191 (196)
41 2waw_A MOBA relate protein; un 99.8 3.3E-18 1.1E-22 142.1 18.1 185 2-230 7-195 (199)
42 2i5k_A UTP--glucose-1-phosphat 99.8 1.2E-18 4.1E-23 162.0 16.9 303 2-321 94-486 (488)
43 2wee_A MOBA-related protein; u 99.8 7.7E-19 2.6E-23 145.7 13.6 182 2-228 7-193 (197)
44 1vpa_A 2-C-methyl-D-erythritol 99.8 2.2E-18 7.6E-23 147.0 15.4 208 1-231 14-228 (234)
45 1i52_A 4-diphosphocytidyl-2-C- 99.8 1.2E-17 4E-22 142.7 14.7 213 1-231 8-228 (236)
46 3q80_A 2-C-methyl-D-erythritol 99.7 1E-16 3.5E-21 135.8 17.9 207 2-230 9-229 (231)
47 2px7_A 2-C-methyl-D-erythritol 99.7 4.7E-18 1.6E-22 145.2 9.2 197 2-230 27-231 (236)
48 3d5n_A Q97W15_sulso; NESG, SSR 99.7 1.9E-17 6.7E-22 137.3 8.2 181 1-230 3-188 (197)
49 1jv1_A Glcnac1P uridyltransfer 99.7 5E-16 1.7E-20 144.9 17.2 180 1-184 103-341 (505)
50 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.7 3.1E-18 1.1E-22 155.9 0.6 186 104-309 12-205 (374)
51 1e5k_A Molybdopterin-guanine d 99.7 1.2E-16 4.2E-21 132.9 9.5 107 2-124 8-116 (201)
52 2e8b_A Probable molybdopterin- 99.7 8.9E-17 3E-21 133.8 8.3 172 2-229 16-197 (201)
53 3ngw_A Molybdopterin-guanine d 99.7 1.2E-15 3.9E-20 127.4 14.3 183 1-232 1-194 (208)
54 1w55_A ISPD/ISPF bifunctional 99.6 2.5E-15 8.6E-20 135.6 10.3 192 2-227 5-202 (371)
55 2oeg_A UTP-glucose-1-phosphate 99.5 2.2E-13 7.6E-18 126.4 13.2 177 2-184 77-320 (505)
56 3c8v_A Putative acetyltransfer 99.4 6.5E-14 2.2E-18 130.2 6.3 225 71-325 111-378 (496)
57 3oc9_A UDP-N-acetylglucosamine 99.4 2.5E-12 8.6E-17 115.8 16.2 178 2-184 37-274 (405)
58 2yqc_A UDP-N-acetylglucosamine 99.4 2.1E-12 7.3E-17 120.1 14.5 178 1-183 104-348 (486)
59 3r8y_A 2,3,4,5-tetrahydropyrid 99.4 7.9E-14 2.7E-18 119.1 4.5 116 204-324 40-196 (240)
60 3bfp_A Acetyltransferase; LEFT 99.3 1.8E-11 6.2E-16 100.9 13.9 81 241-323 89-173 (194)
61 4ea9_A Perosamine N-acetyltran 99.3 1.9E-11 6.3E-16 102.9 13.7 83 240-324 112-196 (220)
62 3ixc_A Hexapeptide transferase 99.3 1.9E-11 6.4E-16 100.5 9.4 46 276-322 95-141 (191)
63 3vbi_A ANTD, galactoside O-ace 99.2 1.6E-11 5.4E-16 102.2 8.7 83 240-324 53-165 (205)
64 1xhd_A Putative acetyltransfer 99.2 2.3E-11 7.9E-16 98.4 9.2 64 258-324 52-121 (173)
65 3r3r_A Ferripyochelin binding 99.2 1.9E-11 6.4E-16 100.2 8.6 80 242-324 36-131 (187)
66 3srt_A Maltose O-acetyltransfe 99.2 1.5E-10 5E-15 94.8 13.9 82 241-324 58-163 (188)
67 3eh0_A UDP-3-O-[3-hydroxymyris 99.2 9.6E-11 3.3E-15 105.0 13.3 66 242-309 112-178 (341)
68 3ftt_A Putative acetyltransfer 99.2 2E-10 6.8E-15 94.9 13.5 80 241-322 56-159 (199)
69 3r8y_A 2,3,4,5-tetrahydropyrid 99.2 5.7E-11 2E-15 101.3 10.4 89 238-328 102-206 (240)
70 3bfp_A Acetyltransferase; LEFT 99.2 8.2E-11 2.8E-15 96.9 10.8 112 214-327 51-171 (194)
71 3kwd_A Carbon dioxide concentr 99.2 3.8E-11 1.3E-15 100.5 8.7 49 277-325 112-160 (213)
72 3r3r_A Ferripyochelin binding 99.2 5.4E-11 1.8E-15 97.5 9.4 87 238-326 14-115 (187)
73 3nz2_A Hexapeptide-repeat cont 99.2 9.4E-11 3.2E-15 96.6 10.9 50 241-292 58-112 (195)
74 3mc4_A WW/RSP5/WWP domain:bact 99.2 9.4E-11 3.2E-15 101.1 11.2 74 237-312 168-252 (287)
75 1xhd_A Putative acetyltransfer 99.2 4.9E-11 1.7E-15 96.4 9.0 77 242-320 54-135 (173)
76 3pmo_A UDP-3-O-[3-hydroxymyris 99.2 1.2E-10 4.1E-15 105.4 12.4 66 242-309 134-200 (372)
77 3ixc_A Hexapeptide transferase 99.2 4.4E-11 1.5E-15 98.3 8.6 84 239-324 33-125 (191)
78 4ea9_A Perosamine N-acetyltran 99.2 9.4E-11 3.2E-15 98.6 10.8 88 238-327 104-193 (220)
79 3gos_A 2,3,4,5-tetrahydropyrid 99.2 9.3E-11 3.2E-15 101.7 10.6 86 237-324 108-208 (276)
80 1v3w_A Ferripyochelin binding 99.2 5.7E-11 2E-15 96.0 8.7 44 277-321 72-116 (173)
81 3mqg_A Lipopolysaccharides bio 99.2 8.5E-11 2.9E-15 96.7 9.9 59 241-301 17-76 (192)
82 1v3w_A Ferripyochelin binding 99.2 7.9E-11 2.7E-15 95.2 9.2 51 270-320 82-133 (173)
83 3r5d_A Tetrahydrodipicolinate 99.2 3.2E-11 1.1E-15 104.7 7.2 86 238-326 189-287 (347)
84 4e79_A UDP-3-O-acylglucosamine 99.2 1E-10 3.4E-15 105.4 10.7 67 241-309 116-183 (357)
85 3r1w_A Carbonic anhydrase; bet 99.2 8.8E-11 3E-15 96.3 9.3 62 259-323 60-134 (189)
86 3jqy_B NEUO, polysialic acid O 99.2 8.3E-11 2.8E-15 101.0 9.5 83 240-324 86-194 (252)
87 3r1w_A Carbonic anhydrase; bet 99.2 7.8E-11 2.7E-15 96.6 8.8 79 242-322 22-115 (189)
88 3hsq_A Acyl-[acyl-carrier-prot 99.2 1.3E-10 4.4E-15 100.2 10.6 71 238-310 11-95 (259)
89 3vbi_A ANTD, galactoside O-ace 99.2 2.2E-11 7.5E-16 101.3 5.4 71 237-309 30-106 (205)
90 3r0s_A Acyl-[acyl-carrier-prot 99.2 1.7E-10 5.7E-15 99.9 10.6 85 238-324 15-121 (266)
91 3kwd_A Carbon dioxide concentr 99.1 1.1E-10 3.8E-15 97.6 9.2 82 240-324 80-176 (213)
92 3hjj_A Maltose O-acetyltransfe 99.1 4.5E-10 1.5E-14 92.1 12.6 82 241-324 59-165 (190)
93 3mqg_A Lipopolysaccharides bio 99.1 2.2E-10 7.4E-15 94.3 10.3 69 239-309 9-78 (192)
94 3f1x_A Serine acetyltransferas 99.1 2.9E-10 1E-14 99.3 11.6 75 237-313 194-288 (310)
95 3fs8_A QDTC; acetyltransferase 99.1 1.6E-10 5.5E-15 100.4 9.9 81 242-324 23-119 (273)
96 3fsy_A Tetrahydrodipicolinate 99.1 1.5E-10 5.3E-15 99.7 9.4 84 242-326 164-264 (332)
97 1qre_A Carbonic anhydrase; bet 99.1 1.4E-10 4.9E-15 99.2 9.2 61 258-321 141-202 (247)
98 3fs8_A QDTC; acetyltransferase 99.1 1.7E-10 5.9E-15 100.3 9.8 64 259-324 72-137 (273)
99 3tk8_A 2,3,4,5-tetrahydropyrid 99.1 2.3E-10 7.8E-15 100.7 10.5 51 257-309 174-233 (316)
100 3eg4_A 2,3,4,5-tetrahydropyrid 99.1 2.5E-10 8.6E-15 100.1 10.7 65 257-323 158-232 (304)
101 3tv0_A Dynactin subunit 6; LEF 99.1 2.1E-10 7.1E-15 94.5 9.6 28 240-267 13-40 (194)
102 1j2z_A Acyl-[acyl-carrier-prot 99.1 2.1E-10 7.1E-15 99.4 9.6 70 238-309 12-94 (270)
103 3eg4_A 2,3,4,5-tetrahydropyrid 99.1 2.6E-10 8.9E-15 100.0 10.2 69 240-310 159-236 (304)
104 4eqy_A Acyl-[acyl-carrier-prot 99.1 2.2E-10 7.4E-15 100.1 9.6 68 241-310 36-116 (283)
105 3c8v_A Putative acetyltransfer 99.1 9.4E-11 3.2E-15 109.0 7.7 86 237-325 271-356 (496)
106 4e79_A UDP-3-O-acylglucosamine 99.1 3.9E-10 1.3E-14 101.5 11.6 101 213-315 78-184 (357)
107 1ocx_A Maltose O-acetyltransfe 99.1 5E-10 1.7E-14 91.0 10.8 76 245-322 58-157 (182)
108 3q1x_A Serine acetyltransferas 99.1 2E-10 6.7E-15 100.6 8.9 32 278-309 225-256 (313)
109 1ssq_A SAT, serine acetyltrans 99.1 6E-10 2.1E-14 95.4 11.5 73 237-311 141-224 (267)
110 2ggo_A 401AA long hypothetical 99.1 1.5E-10 5E-15 106.4 8.2 69 239-310 262-330 (401)
111 3gos_A 2,3,4,5-tetrahydropyrid 99.1 3.4E-10 1.2E-14 98.2 9.9 71 239-311 133-212 (276)
112 2qia_A UDP-N-acetylglucosamine 99.1 3.6E-10 1.2E-14 97.6 10.1 85 239-325 17-122 (262)
113 4eqy_A Acyl-[acyl-carrier-prot 99.1 2.8E-10 9.7E-15 99.3 9.5 66 237-309 20-85 (283)
114 2qia_A UDP-N-acetylglucosamine 99.1 3.1E-10 1.1E-14 98.1 9.5 79 242-322 38-137 (262)
115 4e6u_A Acyl-[acyl-carrier-prot 99.1 3.5E-10 1.2E-14 97.9 9.8 69 240-310 20-101 (265)
116 2rij_A Putative 2,3,4,5-tetrah 99.1 4.7E-10 1.6E-14 100.2 10.6 117 208-326 166-321 (387)
117 1qre_A Carbonic anhydrase; bet 99.1 3.8E-10 1.3E-14 96.5 9.5 50 277-326 141-190 (247)
118 4e6u_A Acyl-[acyl-carrier-prot 99.1 4E-10 1.4E-14 97.5 9.4 64 244-309 6-70 (265)
119 3q1x_A Serine acetyltransferas 99.1 9.2E-10 3.1E-14 96.4 11.6 84 239-324 163-254 (313)
120 1t3d_A SAT, serine acetyltrans 99.1 1.2E-09 4E-14 94.5 12.0 73 237-311 161-244 (289)
121 3t57_A UDP-N-acetylglucosamine 99.1 5.7E-10 1.9E-14 98.5 10.3 69 239-309 19-92 (305)
122 3tk8_A 2,3,4,5-tetrahydropyrid 99.1 5.2E-10 1.8E-14 98.4 9.9 69 241-311 176-253 (316)
123 3pmo_A UDP-3-O-[3-hydroxymyris 99.1 6.3E-10 2.1E-14 100.7 10.6 100 214-315 95-201 (372)
124 1j2z_A Acyl-[acyl-carrier-prot 99.1 6E-10 2E-14 96.5 10.0 61 242-309 4-64 (270)
125 3t57_A UDP-N-acetylglucosamine 99.1 5.4E-10 1.8E-14 98.6 9.8 78 239-323 7-89 (305)
126 2p2o_A Maltose transacetylase; 99.1 5.7E-10 2E-14 90.9 9.2 44 276-320 130-173 (185)
127 3tv0_A Dynactin subunit 6; LEF 99.0 7.9E-10 2.7E-14 91.0 9.9 60 260-321 88-148 (194)
128 3hjj_A Maltose O-acetyltransfe 99.0 4.7E-10 1.6E-14 92.0 8.5 70 241-312 80-170 (190)
129 3r0s_A Acyl-[acyl-carrier-prot 99.0 7.2E-10 2.5E-14 95.9 9.9 62 241-309 6-67 (266)
130 3eh0_A UDP-3-O-[3-hydroxymyris 99.0 9.8E-10 3.4E-14 98.4 11.0 98 215-314 74-178 (341)
131 3srt_A Maltose O-acetyltransfe 99.0 5.7E-10 2E-14 91.3 8.6 78 241-320 78-176 (188)
132 2pig_A Putative transferase; S 99.0 4.6E-10 1.6E-14 99.5 8.5 62 240-304 66-127 (334)
133 3f1x_A Serine acetyltransferas 99.0 1.1E-09 3.7E-14 95.7 10.5 84 239-329 190-293 (310)
134 1ocx_A Maltose O-acetyltransfe 99.0 8.9E-10 3E-14 89.5 9.4 78 241-321 74-172 (182)
135 3mc4_A WW/RSP5/WWP domain:bact 99.0 1.1E-09 3.6E-14 94.5 9.5 29 239-267 164-194 (287)
136 3nz2_A Hexapeptide-repeat cont 99.0 1.1E-09 3.8E-14 90.1 9.2 70 241-312 78-168 (195)
137 3ftt_A Putative acetyltransfer 99.0 7.4E-10 2.5E-14 91.5 8.1 71 240-312 75-166 (199)
138 3hsq_A Acyl-[acyl-carrier-prot 99.0 1.6E-09 5.6E-14 93.3 10.3 56 242-297 3-63 (259)
139 2pig_A Putative transferase; S 99.0 8.6E-10 2.9E-14 97.8 8.2 57 240-299 84-140 (334)
140 2p2o_A Maltose transacetylase; 99.0 1.8E-09 6.1E-14 88.0 9.2 82 241-324 56-161 (185)
141 1krr_A Galactoside O-acetyltra 99.0 2.2E-09 7.7E-14 88.5 9.7 48 242-291 58-110 (203)
142 3jqy_B NEUO, polysialic acid O 99.0 1.5E-09 5.2E-14 93.1 9.0 71 240-312 106-199 (252)
143 4fce_A Bifunctional protein GL 99.0 1E-09 3.5E-14 102.5 8.3 77 240-319 287-363 (459)
144 2iu8_A LPXD, UDP-3-O-[3-hydrox 98.9 2.7E-09 9.2E-14 96.9 10.1 61 247-309 138-199 (374)
145 2wlg_A Polysialic acid O-acety 98.9 2.7E-09 9.3E-14 89.2 9.3 83 240-324 59-168 (215)
146 1ssq_A SAT, serine acetyltrans 98.9 3.5E-09 1.2E-13 90.6 9.4 26 104-129 21-48 (267)
147 4hur_A Virginiamycin A acetylt 98.9 1.4E-09 4.8E-14 91.3 6.7 37 276-312 119-155 (220)
148 3st8_A Bifunctional protein GL 98.9 2.4E-09 8.1E-14 101.2 9.0 40 270-309 380-426 (501)
149 1hm9_A GLMU, UDP-N-acetylgluco 98.9 2.7E-09 9.2E-14 99.9 9.1 59 258-319 310-368 (468)
150 1krr_A Galactoside O-acetyltra 98.9 5.1E-09 1.7E-13 86.4 9.3 70 241-312 77-167 (203)
151 2v0h_A Bifunctional protein GL 98.9 1.9E-09 6.6E-14 100.5 7.6 74 241-317 285-358 (456)
152 3eev_A Chloramphenicol acetylt 98.9 7.4E-09 2.5E-13 86.3 9.4 43 276-319 111-153 (212)
153 1t3d_A SAT, serine acetyltrans 98.9 6.6E-09 2.2E-13 89.8 9.2 26 104-129 41-68 (289)
154 3r5d_A Tetrahydrodipicolinate 98.8 2.9E-09 1E-13 92.4 5.9 25 243-267 182-206 (347)
155 3brk_X Glucose-1-phosphate ade 98.8 5.5E-09 1.9E-13 96.4 8.0 73 239-316 324-396 (420)
156 1yp2_A Glucose-1-phosphate ade 98.8 1.4E-08 4.9E-13 94.5 10.7 67 240-311 331-416 (451)
157 3fsy_A Tetrahydrodipicolinate 98.8 1.4E-08 4.8E-13 87.6 8.5 49 258-310 208-265 (332)
158 4hur_A Virginiamycin A acetylt 98.8 1.6E-08 5.6E-13 84.7 8.4 30 295-324 120-150 (220)
159 2wlg_A Polysialic acid O-acety 98.7 2.5E-08 8.6E-13 83.3 8.2 71 240-312 80-173 (215)
160 3r3i_A UTP--glucose-1-phosphat 98.7 8.5E-08 2.9E-12 88.6 12.3 305 2-320 129-525 (528)
161 2rij_A Putative 2,3,4,5-tetrah 98.6 1.2E-07 4.1E-12 84.8 8.2 57 255-315 262-328 (387)
162 4e8l_A Virginiamycin A acetylt 98.6 2.5E-07 8.5E-12 77.2 9.4 36 276-311 118-153 (219)
163 1mr7_A Streptogramin A acetylt 98.5 3.1E-07 1.1E-11 76.1 9.3 37 276-312 113-149 (209)
164 3eev_A Chloramphenicol acetylt 98.5 3.3E-07 1.1E-11 76.3 9.1 44 285-328 108-152 (212)
165 1xat_A Xenobiotic acetyltransf 98.4 8E-07 2.8E-11 73.7 9.3 43 276-319 110-152 (212)
166 4e8l_A Virginiamycin A acetylt 98.4 6.5E-07 2.2E-11 74.6 8.1 28 295-322 119-147 (219)
167 3gue_A UTP-glucose-1-phosphate 98.4 4.2E-06 1.4E-10 76.8 13.2 301 3-316 79-483 (484)
168 1mr7_A Streptogramin A acetylt 98.2 3.8E-06 1.3E-10 69.5 8.4 38 289-326 114-152 (209)
169 1xat_A Xenobiotic acetyltransf 97.9 4.7E-05 1.6E-09 63.0 9.4 45 283-327 105-150 (212)
170 2i5e_A Hypothetical protein MM 97.8 2E-05 6.9E-10 65.3 5.4 103 1-123 4-111 (211)
171 3ogz_A UDP-sugar pyrophosphory 97.5 0.00079 2.7E-08 63.6 11.8 130 2-135 116-297 (630)
172 3cgx_A Putative nucleotide-dip 96.8 0.019 6.6E-07 48.2 12.2 90 30-127 36-130 (242)
173 1qg8_A Protein (spore coat pol 94.5 0.44 1.5E-05 39.6 11.4 98 26-128 7-116 (255)
174 3bcv_A Putative glycosyltransf 93.9 0.38 1.3E-05 39.5 9.7 105 26-135 11-119 (240)
175 1xhb_A Polypeptide N-acetylgal 93.1 0.68 2.3E-05 42.6 11.0 104 26-132 35-146 (472)
176 2d7i_A Polypeptide N-acetylgal 88.8 1.5 5.3E-05 41.4 9.0 101 26-130 118-226 (570)
177 2z86_A Chondroitin synthase; G 86.6 4.7 0.00016 38.4 11.0 105 26-134 99-208 (625)
178 3ckj_A Putative uncharacterize 81.4 2.5 8.5E-05 36.8 6.0 100 26-128 54-160 (329)
179 2ffu_A Ppgalnact-2, polypeptid 78.2 8.1 0.00028 35.6 8.8 98 26-131 72-177 (501)
180 2z86_A Chondroitin synthase; G 77.9 10 0.00034 36.1 9.5 99 27-130 382-484 (625)
181 4hg6_A Cellulose synthase subu 76.5 15 0.0005 36.4 10.4 102 25-130 145-268 (802)
182 4fix_A UDP-galactofuranosyl tr 67.6 19 0.00067 34.5 8.7 99 29-132 189-300 (657)
183 3f1y_A Mannosyl-3-phosphoglyce 67.0 5.4 0.00018 35.7 4.4 104 25-135 99-216 (387)
184 3l7i_A Teichoic acid biosynthe 64.2 1.4 4.8E-05 43.1 0.0 98 26-126 8-109 (729)
185 2zqe_A MUTS2 protein; alpha/be 60.5 25 0.00084 23.6 5.8 41 32-72 19-59 (83)
186 2nxv_A ATP synthase subunits r 56.8 78 0.0027 25.7 10.0 52 73-127 47-101 (249)
187 3p9x_A Phosphoribosylglycinami 55.6 37 0.0012 27.4 7.0 16 1-16 3-18 (211)
188 1jkx_A GART;, phosphoribosylgl 51.0 89 0.0031 25.0 8.7 93 1-125 1-100 (212)
189 1fo8_A Alpha-1,3-mannosyl-glyc 50.1 90 0.0031 27.2 9.2 91 25-119 7-117 (343)
190 3vdp_A Recombination protein R 47.9 1E+02 0.0035 24.7 8.3 53 33-85 137-191 (212)
191 1meo_A Phosophoribosylglycinam 44.3 1.2E+02 0.0041 24.2 8.9 93 1-125 1-100 (209)
192 3qd7_X Uncharacterized protein 41.8 60 0.0021 24.1 5.8 58 22-79 46-115 (137)
193 2ywr_A Phosphoribosylglycinami 41.4 80 0.0027 25.3 7.0 41 33-77 14-56 (216)
194 3tqr_A Phosphoribosylglycinami 40.8 48 0.0017 26.7 5.6 19 104-125 85-104 (215)
195 2d4p_A Hypothetical protein TT 40.3 29 0.00099 26.0 3.8 38 30-67 76-113 (141)
196 3da8_A Probable 5'-phosphoribo 38.1 34 0.0012 27.6 4.2 19 104-125 91-110 (215)
197 3lyh_A Cobalamin (vitamin B12) 37.3 1.1E+02 0.0037 21.8 6.7 58 30-90 46-109 (126)
198 2dxq_A AGR_C_4057P, acetyltran 36.3 42 0.0014 24.4 4.3 38 30-67 99-136 (150)
199 3auf_A Glycinamide ribonucleot 32.0 1.6E+02 0.0055 23.8 7.4 84 30-125 31-122 (229)
200 2pdo_A Acetyltransferase YPEA; 30.7 58 0.002 23.3 4.3 38 30-67 87-124 (144)
201 2bei_A Diamine acetyltransfera 29.9 58 0.002 24.3 4.3 38 30-67 106-143 (170)
202 3ce9_A Glycerol dehydrogenase; 29.4 1.7E+02 0.0058 25.2 7.7 91 30-125 18-110 (354)
203 4e0a_A BH1408 protein; structu 28.8 1.1E+02 0.0036 21.9 5.6 38 30-67 106-143 (164)
204 4evy_A Aminoglycoside N(6')-ac 28.0 65 0.0022 23.6 4.3 38 30-67 113-150 (166)
205 1s3z_A Aminoglycoside 6'-N-ace 28.0 68 0.0023 23.4 4.3 38 30-67 113-150 (165)
206 3f8k_A Protein acetyltransfera 27.3 74 0.0025 22.9 4.4 38 30-67 91-128 (160)
207 1tiq_A Protease synthase and s 27.3 68 0.0023 24.1 4.3 38 30-67 108-145 (180)
208 3av3_A Phosphoribosylglycinami 27.0 1.7E+02 0.0059 23.2 6.7 81 33-125 16-103 (212)
209 2bo4_A Mannosylglycerate synth 26.6 3.3E+02 0.011 24.0 9.3 85 47-135 29-127 (397)
210 3lod_A Putative acyl-COA N-acy 26.1 69 0.0024 23.1 4.0 38 30-67 92-129 (162)
211 4hwg_A UDP-N-acetylglucosamine 26.0 42 0.0014 29.7 3.1 89 23-116 11-108 (385)
212 3lub_A Putative creatinine ami 25.5 88 0.003 25.9 4.8 44 33-76 98-142 (254)
213 1u6m_A Acetyltransferase, GNAT 25.2 53 0.0018 25.2 3.3 38 30-67 130-167 (199)
214 2oh1_A Acetyltransferase, GNAT 25.0 79 0.0027 23.2 4.3 38 30-67 121-158 (179)
215 1mk4_A Hypothetical protein YQ 23.7 84 0.0029 22.4 4.1 38 30-67 86-123 (157)
216 1z4e_A Transcriptional regulat 23.5 49 0.0017 23.9 2.7 37 30-66 103-139 (153)
217 3g8w_A Lactococcal prophage PS 23.5 82 0.0028 22.9 4.0 38 30-67 99-136 (169)
218 2fia_A Acetyltransferase; stru 23.3 84 0.0029 22.4 4.0 38 30-67 93-130 (162)
219 2ae6_A Acetyltransferase, GNAT 23.2 79 0.0027 23.3 3.9 38 30-67 99-136 (166)
220 3d8p_A Acetyltransferase of GN 23.1 95 0.0032 22.2 4.3 37 30-66 96-132 (163)
221 2cy2_A TTHA1209, probable acet 22.6 95 0.0032 22.4 4.3 38 30-67 106-143 (174)
222 3dr6_A YNCA; acetyltransferase 22.5 96 0.0033 22.3 4.3 38 30-67 100-137 (174)
223 2fe7_A Probable N-acetyltransf 22.2 1E+02 0.0034 22.2 4.3 38 30-67 106-143 (166)
224 2dcl_A Hypothetical UPF0166 pr 21.9 88 0.003 22.8 3.6 27 28-54 22-48 (127)
225 2r1i_A GCN5-related N-acetyltr 21.7 93 0.0032 22.6 4.0 38 30-67 115-152 (172)
226 1o51_A Hypothetical protein TM 21.7 71 0.0024 22.8 3.0 27 28-54 26-52 (114)
227 3dzc_A UDP-N-acetylglucosamine 21.6 93 0.0032 27.4 4.6 89 25-114 29-123 (396)
228 2x7b_A N-acetyltransferase SSO 21.2 1.1E+02 0.0037 22.6 4.3 38 30-67 105-143 (168)
229 1qsm_A HPA2 histone acetyltran 21.1 88 0.003 22.0 3.7 38 30-67 101-138 (152)
230 3toe_A MTH10B, DNA/RNA-binding 21.0 88 0.003 21.4 3.2 31 25-55 6-38 (91)
231 1y9k_A IAA acetyltransferase; 20.5 1.1E+02 0.0039 21.9 4.3 37 30-66 79-115 (157)
232 3fix_A N-acetyltransferase; te 20.4 95 0.0033 23.1 3.9 38 30-67 128-165 (183)
233 3eo4_A Uncharacterized protein 20.3 1.1E+02 0.0039 22.0 4.3 38 30-67 108-145 (164)
234 3bfj_A 1,3-propanediol oxidore 20.3 3.4E+02 0.011 23.7 7.9 93 29-124 16-113 (387)
235 2q7b_A Acetyltransferase, GNAT 20.2 1E+02 0.0035 23.0 4.0 37 30-66 115-151 (181)
236 2cnt_A Modification of 30S rib 20.2 1.2E+02 0.004 22.0 4.3 38 30-67 81-118 (160)
237 3pp9_A Putative streptothricin 20.2 1.1E+02 0.0038 22.7 4.3 38 30-67 118-155 (187)
No 1
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.1e-48 Score=363.65 Aligned_cols=321 Identities=21% Similarity=0.314 Sum_probs=252.5
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCc-chHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHH-hhhc---cCeEE
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANK-PMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE-FEKK---LEIKI 75 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~-pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~-~~~~---~~~~v 75 (331)
|+|||||||.|+||+|+|..+||+|+|++|+ |||+|++++|.++|+++++|++++..+.+.+++.+ |.-. ....+
T Consensus 13 ~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~v 92 (420)
T 3brk_X 13 AMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGWDFFRPERNESF 92 (420)
T ss_dssp EEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHSCCCCGGGTCEE
T ss_pred eEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhhhccccccccCCE
Confidence 5799999999999999999999999999999 99999999999999999999999888888888876 2200 01123
Q ss_pred EEee--CC--cc---cCChHHHHHHHhhccCCCCCcEEEEeCCeeccccHHHHHHHHhhcCCceEEE---e--cCCCCce
Q 020113 76 TCSQ--ET--EP---LGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKQMIEFHRGRGGEASIM---V--DEPSKYG 143 (331)
Q Consensus 76 ~~~~--~~--~~---~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~~~l~~~l~~~~~~~~~~~i~---~--~~~~~~~ 143 (331)
.++. +. .+ .|++++++.+++.+.....++|++++||.+++.++.++++.|.+.++++++. . +++..|+
T Consensus 93 ~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g 172 (420)
T 3brk_X 93 DILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPRMEATGFG 172 (420)
T ss_dssp EEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEEETTGGGGSE
T ss_pred EEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeecCccccCccc
Confidence 3332 11 23 7999999999998863212389999999999889999999999888888776 2 3566899
Q ss_pred EEEEcCCcCceeEeeecCCCCC-------CCeEEEEEEEEChhhHh-hccc------CCCCcccchHHHHHhcCcEEEEE
Q 020113 144 VVVMEETTGKVEKFVEKPKNFV-------GNKINAGIYLLNPSVLD-RIEL------KPTSIEKEVFPEIAAENKLFAMV 209 (331)
Q Consensus 144 ~v~~d~~~~~v~~~~ek~~~~~-------~~~~~~Giy~~~~~~l~-~l~~------~~~~~~~~~l~~l~~~~~i~~~~ 209 (331)
++.+|++ +++..|.|||..+. +.+.++|+|+|++++|. .+.. ...++..++++.++++++++++.
T Consensus 173 ~v~~d~~-g~v~~~~ekp~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~l~~li~~g~v~~~~ 251 (420)
T 3brk_X 173 VMHVNEK-DEIIDFIEKPADPPGIPGNEGFALASMGIYVFHTKFLMEAVRRDAADPTSSRDFGKDIIPYIVEHGKAVAHR 251 (420)
T ss_dssp EEEECTT-SBEEEEEESCSSCCCBTTBTTEEEEEEEEEEEEHHHHHHHHTSSCCC----------CTTHHHHHSCEEEEE
T ss_pred EEEECCC-CcEEEeEeCCCccccccccccceEEeeeeEEEeHHHHHHHHHHhcccCCccccchHHHHHHHhhhCcEEEEE
Confidence 9999887 89999999986544 67999999999999874 4432 12345568888888888999999
Q ss_pred e-----------CceEEecCCHHHHHHHHHHHHhhhcc----ccCCccCCCceEecceEEcC----------CcEECCCc
Q 020113 210 L-----------PGFWMDIGQPKDYITGLRLYLDFLQK----NSSSKLATGSNIIGNVLVHE----------GAKIGDGC 264 (331)
Q Consensus 210 ~-----------~~~~~~i~t~~d~~~a~~~~l~~~~~----~~~~~i~~~~~i~~~~~i~~----------~~~i~~~~ 264 (331)
+ +++|.|++||+||.++++.++.+... .....+...+.+.+++.|++ ++.||++|
T Consensus 252 ~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~~~~~~i~~~~ig~~~ 331 (420)
T 3brk_X 252 FADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSAVSSVVSGDC 331 (420)
T ss_dssp HHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCSSCTTCCSSCCCCCCCCCCCCEEECBCSSCBCEEESCEECSSC
T ss_pred eccccccccccCCCEEEECCCHHHHHHHHHHHhCCCchhhcCCCCCceeeccccCCCcEEecccccCCcEecCCEECCCC
Confidence 9 88999999999999999988765421 11122334444555555554 88888888
Q ss_pred EECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEccCeEEccCccC
Q 020113 265 LIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLPHKEIKSSIVN 326 (331)
Q Consensus 265 ~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~~~~i~~~~~~ 326 (331)
+| .++.|.+|+||++|.||++|.|.+ |+|+++|+||+++.|.+++|+++++|+++...
T Consensus 332 ~I---~~~~i~~~~ig~~~~I~~~~~i~~-~~i~~~~~i~~~~~i~~~~ig~~~~i~~~~~i 389 (420)
T 3brk_X 332 II---SGAALNRSLLFTGVRANSYSRLEN-AVVLPSVKIGRHAQLSNVVIDHGVVIPEGLIV 389 (420)
T ss_dssp EE---ESCEEESCEECTTCEECTTCEEEE-EEECTTCEECTTCEEEEEEECTTCEECTTCEE
T ss_pred EE---cCCEEeCcEEcCCCEECCCCEEcc-eEEcCCCEECCCCEEeceEECCCCEECCCCEE
Confidence 88 247888999999999999999998 99999999999999998999999999877643
No 2
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=4.7e-47 Score=355.94 Aligned_cols=319 Identities=19% Similarity=0.340 Sum_probs=228.8
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCc-chHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHH-hhhcc-------
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANK-PMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE-FEKKL------- 71 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~-pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~-~~~~~------- 71 (331)
|+|||||||.|+||+|+|..+||+|+|++|+ |||+|++++|.++|++++++++++..+.+.+++.+ |+..+
T Consensus 21 ~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~~ 100 (451)
T 1yp2_A 21 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEG 100 (451)
T ss_dssp EEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHCC--------CC
T ss_pred eEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhhhhhcccccccccC
Confidence 6899999999999999999999999999999 99999999999999999999999888888888865 21011
Q ss_pred CeEEEEeeCC-----cccCChHHHHHHHhhccCCCCCcEEEEeCCeeccccHHHHHHHHhhcCCceEEE---e--cCCCC
Q 020113 72 EIKITCSQET-----EPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKQMIEFHRGRGGEASIM---V--DEPSK 141 (331)
Q Consensus 72 ~~~v~~~~~~-----~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~~~l~~~l~~~~~~~~~~~i~---~--~~~~~ 141 (331)
.+++....+. .+.|++++++.+++.+.....++|++++||++++.++.++++.|.+.+++++++ . +++..
T Consensus 101 ~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~ 180 (451)
T 1yp2_A 101 FVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATA 180 (451)
T ss_dssp EEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEECHHHHTT
T ss_pred cEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcChhhccc
Confidence 1233222221 247999999999998863222389999999999989999999999888888776 2 25678
Q ss_pred ceEEEEcCCcCceeEeeecCCCC---------------------CCCeEEEEEEEEChhhHh-hccc---CCCCcccchH
Q 020113 142 YGVVVMEETTGKVEKFVEKPKNF---------------------VGNKINAGIYLLNPSVLD-RIEL---KPTSIEKEVF 196 (331)
Q Consensus 142 ~~~v~~d~~~~~v~~~~ek~~~~---------------------~~~~~~~Giy~~~~~~l~-~l~~---~~~~~~~~~l 196 (331)
|+++.+|++ +++..|.|||... ..+++++|+|+|++++|. .++. ...++..+++
T Consensus 181 ~g~v~~d~~-~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~l 259 (451)
T 1yp2_A 181 FGLMKIDEE-GRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPGANDFGSEVI 259 (451)
T ss_dssp SEEEEECTT-SBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTTCCCTTTTHH
T ss_pred CCEEEECCC-CCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhcccccchHhhHH
Confidence 999999977 8999999998632 256899999999999874 4432 2335556789
Q ss_pred HHHHhc-CcEEEEEeCceEEecCCHHHHHHHHHHHHhhhcc-----ccCCccCCCceEecc-----eEEcCCcEECCCcE
Q 020113 197 PEIAAE-NKLFAMVLPGFWMDIGQPKDYITGLRLYLDFLQK-----NSSSKLATGSNIIGN-----VLVHEGAKIGDGCL 265 (331)
Q Consensus 197 ~~l~~~-~~i~~~~~~~~~~~i~t~~d~~~a~~~~l~~~~~-----~~~~~i~~~~~i~~~-----~~i~~~~~i~~~~~ 265 (331)
+.++++ .++++++++++|.|++||++|.++++.++.+... .+.+.+++++.|+++ +.| .++.||++|.
T Consensus 260 ~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~I-~~~~Ig~~~~ 338 (451)
T 1yp2_A 260 PGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADV-TDSVIGEGCV 338 (451)
T ss_dssp HHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSSCCCCCCCCCCCEEEEEEEE-EEEEECTTCE
T ss_pred HHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhcccccchhccCCCCeeccCCccCCCeEEcceEE-eCeEECCCCE
Confidence 888887 5799999999999999999999999988765421 122333333333333 333 2455566666
Q ss_pred ECCCCCceEeCCEEcCCCEECCCcEEccceEECCC-------------------cEECcccEEcCcEEccCeEEccCcc
Q 020113 266 IGPDKHACISSSIIGWHSTVGRWARVENMTILGED-------------------VHVADEVYSNGAVVLPHKEIKSSIV 325 (331)
Q Consensus 266 I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~-------------------~~i~~~~~i~~~~v~~~~~i~~~~~ 325 (331)
|+ . +.|.+++||++|.||++|.|.+ +++..+ ++||+++.+.+++|++++.|++++.
T Consensus 339 I~--~-~~i~~~~Ig~~~~Ig~~~~I~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG~~~~ 413 (451)
T 1yp2_A 339 IK--N-CKIHHSVVGLRSCISEGAIIED-SLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVK 413 (451)
T ss_dssp EE--E-EEEESCEECTTCEECTTCEEES-CEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEECTTCE
T ss_pred Ec--c-eEEeccEECCCCEECCCCEEcC-ceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEECCCCE
Confidence 65 4 5555666666666666666666 333333 6666666666666665555555543
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=3.4e-43 Score=333.39 Aligned_cols=316 Identities=20% Similarity=0.305 Sum_probs=234.4
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (331)
.+||||||+||||+|+| ||+|+||+|||||+|+|+.|.++|++++++++++..+.+++++.++.+.++.++.++.|.
T Consensus 14 ~vvILAaG~GtRm~~~~---pK~l~pv~gkp~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~~q~ 90 (501)
T 3st8_A 14 AVLVLAAGPGTRMRSDT---PKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELADTLGRTIDVALQD 90 (501)
T ss_dssp EEEEEECSCCGGGCCSS---CGGGCEETTEEHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHHHHHTSCCEEEECS
T ss_pred eEEEECCcCcccCCCCC---CHHHeEECChhHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 56999999999999964 999999999999999999999999999999999999999999998777778889999999
Q ss_pred cccCChHHHHHHHhhccCCCCCcEEEEeCCe-e-ccccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCcCceeE
Q 020113 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDV-I-SEYPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETTGKVEK 156 (331)
Q Consensus 82 ~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~-i-~~~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~~~v~~ 156 (331)
+++||++|++++++.+.++..+++++++||. + ....+..+++.|++.+++++++ +++|..||.+..|++ +++..
T Consensus 91 ~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp~~yG~i~~~~~-g~v~~ 169 (501)
T 3st8_A 91 RPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGYGRILRTQD-HEVMA 169 (501)
T ss_dssp SCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEECTT-CCEEE
T ss_pred CCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccCCchhccccccccc-eeEEe
Confidence 9999999999999999876555899999998 3 3456899999999999998888 789999999999998 99999
Q ss_pred eeecCCCC----CCCeEEEEEEEEChhhHhhc----ccCCCC---cccchHHHHHhcCc-EEEEEeCceEE--ecCCHHH
Q 020113 157 FVEKPKNF----VGNKINAGIYLLNPSVLDRI----ELKPTS---IEKEVFPEIAAENK-LFAMVLPGFWM--DIGQPKD 222 (331)
Q Consensus 157 ~~ek~~~~----~~~~~~~Giy~~~~~~l~~l----~~~~~~---~~~~~l~~l~~~~~-i~~~~~~~~~~--~i~t~~d 222 (331)
+.||++.+ ..+++++|+|+|+++.|..+ ..++.. +..+++..+...+. +..+..+..|. .+++..+
T Consensus 170 ivEk~~~~~~~~~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~~~~ 249 (501)
T 3st8_A 170 IVEQTDATPSQREIREVNAGVYAFDIAALRSALSRLSSNNAQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQ 249 (501)
T ss_dssp EECGGGCCHHHHHCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCSCCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSSHHH
T ss_pred eccccCCChhhccceeeeceeeeecchhHHHhhhhhcccccccccchhhHHHHHHhcCceEEEEeccchhhhcccccHHH
Confidence 99997643 46899999999999887655 222222 23456666666665 66666655443 4556666
Q ss_pred HHHHHHHHHhhhc-----------------cccCCccCCCceEecceEEcCCcEECCCcEECCC--------------CC
Q 020113 223 YITGLRLYLDFLQ-----------------KNSSSKLATGSNIIGNVLVHEGAKIGDGCLIGPD--------------KH 271 (331)
Q Consensus 223 ~~~a~~~~l~~~~-----------------~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~--------------~~ 271 (331)
+.++...+..+.. ......+++++.|.++++++.++.++.+|.|+++ ..
T Consensus 250 l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~dv~I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~ 329 (501)
T 3st8_A 250 LAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVR 329 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECTTCEECSSEEEETTCEECTTCEECSSCEEEEEEECTTCEECS
T ss_pred HHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECCcceecceeeecCccccccceEEeeceeecCceEecCCEEEe
Confidence 6555444433321 1233457777888877777777777777777744 11
Q ss_pred ceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEccCeEEc
Q 020113 272 ACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLPHKEIK 321 (331)
Q Consensus 272 ~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~~~~i~ 321 (331)
+.+..+.+++++.+|++++++.+++|+++|+||+++++++++|++++.|+
T Consensus 330 ~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik~s~Ig~gskI~ 379 (501)
T 3st8_A 330 THGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVP 379 (501)
T ss_dssp EEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEEESCEECTTCEEE
T ss_pred ecccccccccccccCCceeecCCcEEccccccCCeEEEccceecCCcEEe
Confidence 11222334455555555555555555555555555555555544444433
No 4
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=5.1e-43 Score=323.83 Aligned_cols=303 Identities=25% Similarity=0.433 Sum_probs=238.3
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
|+|||||||.|+||+|+|...||+|+|++|+|||+|+++.|.++|++++++++++. +++++.+... + +.++.+
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~~--~--i~~~~~ 73 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSKPLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKLK--E--ISIVTQ 73 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHCT--T--CEEEEC
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCEeHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccCC--c--EEEEeC
Confidence 89999999999999999999999999999999999999999999999999999876 6667665211 2 334445
Q ss_pred Cc-ccCChHHHHHHHhhccCCCCCcEEEEeCCeecc--ccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCcCce
Q 020113 81 TE-PLGTAGPLALARDKLIDDSGEPFFVLNSDVISE--YPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETTGKV 154 (331)
Q Consensus 81 ~~-~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~--~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~~~v 154 (331)
+. +.|++++++.+.+ . +++++++||+++. .+++++++ .+++++. ..++..|+++..+++ +++
T Consensus 74 ~~~~~g~~~~l~~~~~---~---~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~~~~~~~~v~~~~~-g~v 141 (401)
T 2ggo_A 74 KDDIKGTGAAILSAKF---N---DEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVSNPKDYGVLVLDNQ-NNL 141 (401)
T ss_dssp CTTCCBSTTTGGGCCC---S---SEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECSCCSSSCEEEECTT-SSE
T ss_pred CCCCCChHHHHHHhcc---C---CCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcCCCcceeEEEECCC-CeE
Confidence 55 6788888877654 1 2899999999776 55777766 2445544 566778888888877 899
Q ss_pred eEeeecCCCCCCCeEEEEEEEEChhhHhhcccCC----CCc-ccchHHHHHhc-CcEEEEEeCceEEecCCHHHHHHHHH
Q 020113 155 EKFVEKPKNFVGNKINAGIYLLNPSVLDRIELKP----TSI-EKEVFPEIAAE-NKLFAMVLPGFWMDIGQPKDYITGLR 228 (331)
Q Consensus 155 ~~~~ek~~~~~~~~~~~Giy~~~~~~l~~l~~~~----~~~-~~~~l~~l~~~-~~i~~~~~~~~~~~i~t~~d~~~a~~ 228 (331)
..+.|||..+.+++.++|+|+|++++++.++... ..+ ..++++.+ .. .++..++.+++|.|++||+||.++++
T Consensus 142 ~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~g~~v~~~~~~~~~~dI~t~edl~~a~~ 220 (401)
T 2ggo_A 142 SKIIEKPEIPPSNLINAGIYKLNSDIFTYLDKISISERGELELTDAINLM-AKDHRVKVIEYEGYWMDIGKPWNIIDVNK 220 (401)
T ss_dssp EEEECSCSSCSCSEEEEEEEEEETHHHHHHHHSCCCSSSCBCHHHHHHHH-HHHSCEEEEECCSCEEECCSHHHHHHHHH
T ss_pred EEEEECCCCCCCcEEEEEEEEEcHHHHHHhhhcCcCCCCceEHHHHHHHH-HCCCcEEEEEecceEEcCCCHHHHHHHHH
Confidence 9999999877888999999999999988773211 111 13567766 44 47889999889999999999999999
Q ss_pred HHHhhhc-cc------------cCCccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEccc
Q 020113 229 LYLDFLQ-KN------------SSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVENM 294 (331)
Q Consensus 229 ~~l~~~~-~~------------~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~~ 294 (331)
.++.+.. .. ....+++++.|++++.|+.++.||++|.|+ ++++|. +++||++|.||++|.|.+
T Consensus 221 ~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~--~~~~i~~~~~Ig~~~~ig~~~~i~~- 297 (401)
T 2ggo_A 221 WALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSEIG--PNSYLRPYTILVEKNKIGASVEVKE- 297 (401)
T ss_dssp HHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEESSEEECTTCEEC--SSCEECTTEEECSSCEEEETCEEES-
T ss_pred HHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEeCCeEECCCCEEC--CCCEEcCCcEECCCCEECCCCEEec-
Confidence 9887754 11 223355566666666666677778888887 778886 688999999999999966
Q ss_pred eEECCCcEECcccEEcCcEEccCeEEccCccC
Q 020113 295 TILGEDVHVADEVYSNGAVVLPHKEIKSSIVN 326 (331)
Q Consensus 295 ~~i~~~~~i~~~~~i~~~~v~~~~~i~~~~~~ 326 (331)
++|+++++|++++.+.+++|++++.|+++...
T Consensus 298 ~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i 329 (401)
T 2ggo_A 298 SVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLI 329 (401)
T ss_dssp EEECTTCEEEESCEEESCEECTTCEECTTCEE
T ss_pred CEEcCCcEECCCceEcceEECCCcEECCCcEE
Confidence 99999999999999988888888888876653
No 5
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=3.3e-42 Score=324.64 Aligned_cols=305 Identities=21% Similarity=0.300 Sum_probs=229.5
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (331)
+|||||||.|+||++ .+||+|+|++|+|||+|+++.|.++|++++++++++..+.+.+++.+ ++ .++.+.
T Consensus 13 ~~vIlAaG~g~R~~~---~~pK~l~~i~gkpli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~~-----~i--~~v~~~ 82 (468)
T 1hm9_A 13 FAIILAAGKGTRMKS---DLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAG-----QT--EFVTQS 82 (468)
T ss_dssp EEEEECCCCCGGGCC---SSCGGGSEETTEEHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSS-----SS--EEEECS
T ss_pred cEEEEcCCCCccCCC---CCCcEeeEECCccHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhCC-----Cc--EEEeCC
Confidence 689999999999986 78999999999999999999999999999999998877666665543 23 334456
Q ss_pred cccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCcCceeE
Q 020113 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETTGKVEK 156 (331)
Q Consensus 82 ~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~~~v~~ 156 (331)
.+.|++++++.+++.+... .++|++++||+ +...+++++++.|.+.++++++. ..++..|+++.+|++ +++..
T Consensus 83 ~~~G~~~sl~~a~~~~~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~~~~~~g~v~~d~~-g~v~~ 160 (468)
T 1hm9_A 83 EQLGTGHAVMMTEPILEGL-SGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDNPFGYGRIVRNDN-AEVLR 160 (468)
T ss_dssp SCCCHHHHHHTTHHHHTTC-CSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEECTT-CCEEE
T ss_pred ccCChHHHHHHHHHHhccC-CCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccCCCCceeEEEECCC-CCEEE
Confidence 6789999999999998632 23899999999 56778999999999888877766 566778999999887 89999
Q ss_pred eeecCC----CCCCCeEEEEEEEEChhhH-hhccc---C---CCCcccchHHHHHhcC-cEEEEEeCceEEe--cCCHHH
Q 020113 157 FVEKPK----NFVGNKINAGIYLLNPSVL-DRIEL---K---PTSIEKEVFPEIAAEN-KLFAMVLPGFWMD--IGQPKD 222 (331)
Q Consensus 157 ~~ek~~----~~~~~~~~~Giy~~~~~~l-~~l~~---~---~~~~~~~~l~~l~~~~-~i~~~~~~~~~~~--i~t~~d 222 (331)
+.|||. .....+.++|+|+|+++.+ +.+.. . ...+..++++.+++.+ +++++.++++|.+ ++||+|
T Consensus 161 ~~ek~~~~~~~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~~~d~~~~l~~~g~~v~~~~~~g~~~~i~i~t~~d 240 (468)
T 1hm9_A 161 IVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVA 240 (468)
T ss_dssp EECTTTCCTTGGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCCTTHHHHHHHHHTCCEEEEECSSGGGGCCCCSHHH
T ss_pred EEECCCCChHHhcCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEEHHHHHHHHHHCCCEEEEEEcCChHHhhCCCCHHH
Confidence 999864 2236799999999999854 44422 1 1123367888888876 7999999999977 559999
Q ss_pred HHHHHHHHHhhhc-----------------cccCCccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCEE
Q 020113 223 YITGLRLYLDFLQ-----------------KNSSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHSTV 285 (331)
Q Consensus 223 ~~~a~~~~l~~~~-----------------~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~i 285 (331)
|..++..+..+.. ..+.+.+++++.|.+++.|++++.||++|.|+ +++.|.++.||++|.|
T Consensus 241 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~I~--~~~~i~~~~ig~~~~i 318 (468)
T 1hm9_A 241 LATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLT--NGTYVVDSTIGAGAVI 318 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEESCGGGCEECTTCEECTTCEECSSCEEESSCEECTTCEEC--TTCEEESCEECTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCEEECCCeeEECCCcEECCCCEECCCcEECCCCEECCCCEEC--CCCEEeccEEeCCcEE
Confidence 9999877654421 11234567777777777777788888888888 6677766666666666
Q ss_pred CCCcEEccceEECCCcEECcccEEc-CcEEccCeEEcc
Q 020113 286 GRWARVENMTILGEDVHVADEVYSN-GAVVLPHKEIKS 322 (331)
Q Consensus 286 g~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~~~~~i~~ 322 (331)
+ ++.|.+ ++||++|.||+++.|. +++|+++++|++
T Consensus 319 ~-~~~i~~-~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~ 354 (468)
T 1hm9_A 319 T-NSMIEE-SSVADGVTVGPYAHIRPNSSLGAQVHIGN 354 (468)
T ss_dssp C-SCEEES-CEECTTCEECSSCEECSSCEECTTCEEEE
T ss_pred E-EEEEec-cccCCCcEECCceEEecCcEECCccEECC
Confidence 6 555555 5555555555555554 455554444443
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=9.5e-41 Score=313.92 Aligned_cols=306 Identities=24% Similarity=0.334 Sum_probs=232.1
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
|+|||||||.|+||++ .+||+|+|++|+|||+|+++.|.++++++++++++++.+.+++++.+. .+.++.+
T Consensus 9 ~~aiIlA~G~g~Rl~~---~~pK~l~~i~g~pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~~------~~~~v~~ 79 (459)
T 4fce_A 9 MSVVILAAGKGTRMYS---DLPKVLHPLAGKPMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLADP------SLNWVLQ 79 (459)
T ss_dssp EEEEEEECCCCGGGCC---SSCGGGSEETTEEHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC-----------CEEEC
T ss_pred ceEEEECCCCCccCCC---CCCcccCeeCCeeHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhccC------CcEEEeC
Confidence 4799999999999998 789999999999999999999999999999999998877787777652 3444556
Q ss_pred CcccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCcCcee
Q 020113 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETTGKVE 155 (331)
Q Consensus 81 ~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~~~v~ 155 (331)
..+.|++++++.+++.+... ++|++++||. +...+++++++.+.+ .++++. ..++..|+++..+ + +++.
T Consensus 80 ~~~~g~~~~i~~~~~~~~~~--~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~~~~~g~v~~~-~-g~v~ 153 (459)
T 4fce_A 80 AEQLGTGHAMQQAAPHFADD--EDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKLDNPSGYGRIVRE-N-GDVV 153 (459)
T ss_dssp SSCCCHHHHHHHHGGGSCTT--SEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECSCCTTSCEEEEE-T-TEEE
T ss_pred CCCCCcHHHHHHHHHhcCCC--CcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEecCCCCcccEEEeC-C-CcEE
Confidence 77889999999999999632 2999999999 566779999998875 334444 6777889998887 4 8999
Q ss_pred EeeecCC----CCCCCeEEEEEEEEChhhHh-hccc------CCCCcccchHHHHHhcC-cEEEEEeCceE--EecCCHH
Q 020113 156 KFVEKPK----NFVGNKINAGIYLLNPSVLD-RIEL------KPTSIEKEVFPEIAAEN-KLFAMVLPGFW--MDIGQPK 221 (331)
Q Consensus 156 ~~~ek~~----~~~~~~~~~Giy~~~~~~l~-~l~~------~~~~~~~~~l~~l~~~~-~i~~~~~~~~~--~~i~t~~ 221 (331)
.+.|||. .....+.++|+|+|+++.+. .++. ....+..++++.+.+.+ ++.++..+++| .+++||+
T Consensus 154 ~~~ek~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~ 233 (459)
T 4fce_A 154 GIVEHKDASDAQREINEINTGILVANGRDLKRWLSLLDNNNAQGEFYITDIIALAHADGKKIATVHPTRLSEVEGVNNRL 233 (459)
T ss_dssp EEECGGGCCTTGGGCCEEEEEEEEEEHHHHHHHHHTCCCCSTTCSCCTTHHHHHHHHTTCCEEEECCSSGGGGCCCSSHH
T ss_pred EEEECCCCChHHhhccEEEEEEEEEEHHHHHHHHHHhCccccCCcEEHHHHHHHHHHCCCeEEEEEcCCHHHhhCCCCHH
Confidence 9999864 23467999999999998764 3321 11222356778887775 69899988755 6799999
Q ss_pred HHHHHHHHHHhhhcc-----------------ccCCccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCE
Q 020113 222 DYITGLRLYLDFLQK-----------------NSSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHST 284 (331)
Q Consensus 222 d~~~a~~~~l~~~~~-----------------~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ 284 (331)
||..++..+..+... .+.+.+++++.|+++++|++++.||++|.|+ .+++|.+++||++|.
T Consensus 234 Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~~~~~~~~ig~~~~i~~~~~i~~~~~ig~~~~I~--~~~~i~~~~Ig~~~~ 311 (459)
T 4fce_A 234 QLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRDITIDTNVIIEGHVILGDRVRIG--TGCVLKNCVIGDDSE 311 (459)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEESCGGGEEEEEEEEECSSCEECTTEEEEEEEEECTTCEEC--TTCEEESCEECTTCE
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEeCCCeEEEeCcEEECCCcEECCCeeeccceEECCCCEEC--CCCEEeccEECCCCE
Confidence 999998766554311 1234577778888888887778888888888 667777777777777
Q ss_pred ECCCcEEccceEECCCcEECcccEEc-CcEEccCeEEccCc
Q 020113 285 VGRWARVENMTILGEDVHVADEVYSN-GAVVLPHKEIKSSI 324 (331)
Q Consensus 285 ig~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~~~~~i~~~~ 324 (331)
|+++|.|.+ ++||++|.||+++.|. ++.++++++|++++
T Consensus 312 I~~~~~i~~-~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~ 351 (459)
T 4fce_A 312 ISPYTVLED-ARLDANCTVGPFARLRPGAELAEGAHVGNFV 351 (459)
T ss_dssp ECSSCEEES-CEECTTCEECSSEEECTTCEECTTCEEEEEE
T ss_pred ECCCcEEeC-CEECCCCEECCccEECCCcEECCCcEECCCe
Confidence 777777765 7777777777777774 56666665555543
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=8.8e-40 Score=307.10 Aligned_cols=304 Identities=22% Similarity=0.343 Sum_probs=229.5
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
|.|||||||.|+||++ .+||+|+|++|+|||+|+++.|.++|++++++++++..+.+++++.+. + +.++.+
T Consensus 6 ~~aiIlA~G~g~Rl~~---~~pK~l~~i~gkpli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~~----~--~~~v~~ 76 (456)
T 2v0h_A 6 LSAVILAAGKGTRMYS---DLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANE----Q--VNWVLQ 76 (456)
T ss_dssp EEEEEECCCCCGGGCS---SSCGGGSEETTEEHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTC----C--CEEEEC
T ss_pred ceEEEECCCCCcccCC---CCCccccEECCccHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhcC----C--cEEEeC
Confidence 3689999999999986 689999999999999999999999999999999998777777766542 3 334455
Q ss_pred CcccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCcCcee
Q 020113 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETTGKVE 155 (331)
Q Consensus 81 ~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~~~v~ 155 (331)
..+.|++++++.+++.+... +++++++||. +...+++++++.|.+ ++++++ ..++..|+.+..+ + +++.
T Consensus 77 ~~~~g~~~~~~~~~~~~~~~--~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~~~~~g~v~~~-~-g~v~ 150 (456)
T 2v0h_A 77 TEQLGTAHAVQQAAPFFKDN--ENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNLDNPTGYGRIIRE-N-GNVV 150 (456)
T ss_dssp SCCCCHHHHHHHHGGGCCTT--SEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECSSCTTSCEEEEE-T-TEEE
T ss_pred CCCCCcHHHHHHHHHhcCCC--CeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeecCCCCccceEEEc-C-CcEE
Confidence 66789999999999988532 2899999999 556779999998876 455555 5667778888887 5 8999
Q ss_pred EeeecCCC----CCCCeEEEEEEEEChhhH-hhccc---C---CCCcccchHHHHHhcC-cEEEEEeCce--EEecCCHH
Q 020113 156 KFVEKPKN----FVGNKINAGIYLLNPSVL-DRIEL---K---PTSIEKEVFPEIAAEN-KLFAMVLPGF--WMDIGQPK 221 (331)
Q Consensus 156 ~~~ek~~~----~~~~~~~~Giy~~~~~~l-~~l~~---~---~~~~~~~~l~~l~~~~-~i~~~~~~~~--~~~i~t~~ 221 (331)
.+.|||.. ....+.++|+|+|+++.+ +.++. . ......++++.+...+ ++..++.+++ |.+++||+
T Consensus 151 ~~~ek~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tpe 230 (456)
T 2v0h_A 151 AIVEQKDANAEQLNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYYLTDLIALANQDNCQVVAVQATDVMEVEGANNRL 230 (456)
T ss_dssp EEECTTTCCHHHHTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCCCGGGHHHHHHHTTCCEEEEECSCTGGGCCCSSHH
T ss_pred EEEECCCCChhHhcCcEEEEEEEEEEHHHHHHHHHHhccccccccEEHHHHHHHHHHcCCEEEEEEeCCcceEEeCCCHH
Confidence 99998652 235799999999999855 44321 1 1122357788887776 6888988654 56999999
Q ss_pred HHHHHHHHHHhhhc-----c------------ccCCccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCE
Q 020113 222 DYITGLRLYLDFLQ-----K------------NSSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHST 284 (331)
Q Consensus 222 d~~~a~~~~l~~~~-----~------------~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ 284 (331)
||.++++.+..+.. . .....+++++.|+++++|++++.||++|.|+ .++.|++++||++|.
T Consensus 231 Dl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~--~~~~i~~~~ig~~~~ 308 (456)
T 2v0h_A 231 QLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNVIIEGNVKLGDRVKIG--TGCVLKNVVIGNDVE 308 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECSSCEECSSEEEEEEEEECTTCEEC--TTCEEEEEEECTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECCCCEEcCCcEEcCCcEECCCCEEC--CCCEEEeEEEeCCCE
Confidence 99999886654421 0 1134567778888888887788888888888 778887777888888
Q ss_pred ECCCcEEccceEECCCcEECcccEEc-CcEEccCeEEcc
Q 020113 285 VGRWARVENMTILGEDVHVADEVYSN-GAVVLPHKEIKS 322 (331)
Q Consensus 285 ig~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~~~~~i~~ 322 (331)
|+++|.|.+ ++||++|.|++++.|. ++.|++++.|++
T Consensus 309 I~~~~~i~~-~~ig~~~~I~~~~~i~~~~~ig~~~~ig~ 346 (456)
T 2v0h_A 309 IKPYSVLED-SIVGEKAAIGPFSRLRPGAELAAETHVGN 346 (456)
T ss_dssp ECSSCEEEE-EEECTTCEECSSEEECTTCEECTTCEEEE
T ss_pred EcCCeEEcc-CcCCCCcEECCccEECCCCEECCCCEECC
Confidence 877777766 7777777777777664 455555544444
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=2.5e-37 Score=272.20 Aligned_cols=229 Identities=22% Similarity=0.354 Sum_probs=194.4
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhh---h--------
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFE---K-------- 69 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~---~-------- 69 (331)
|+|||||||.|+||+|+|..+||+|+|++|+|||+|+++.+.++|+++|+|+++++.+.+++++.+.. +
T Consensus 3 ~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~ 82 (281)
T 3juk_A 3 KKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKE 82 (281)
T ss_dssp CEEEEECCSCCGGGTTGGGTSCGGGCBSSSSBHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------CCHH
T ss_pred eEEEEECCcCCcccCccccCCCcccceECCEEHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhhhhhcccch
Confidence 68999999999999999999999999999999999999999999999999999988888888876410 0
Q ss_pred ---------ccCeEEEEeeCCcccCChHHHHHHHhhccCCCCCcEEEEeCCeecccc-----HHHHHHHHhhcCCceEEE
Q 020113 70 ---------KLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYP-----LKQMIEFHRGRGGEASIM 135 (331)
Q Consensus 70 ---------~~~~~v~~~~~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~~~-----l~~~l~~~~~~~~~~~i~ 135 (331)
.++.++.++.+..+.|++++++.+++.+.++ +|+|++||.+++.+ +.++++.|.+.++ .++.
T Consensus 83 ~~~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~l~~~---~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~-~~v~ 158 (281)
T 3juk_A 83 NALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNE---PFAVILADDLCISHDHPSVLKQMTSLYQKYQC-SIVA 158 (281)
T ss_dssp HHHHHHHHHHHHCEEEEEECSSCCCHHHHHHHTHHHHCSS---CEEEECTTEEEECTTSCCHHHHHHHHHHHHCS-CEEE
T ss_pred hhhhhhhccccCccEEEEecCCCCCcHHHHHHHHHHcCCC---CEEEEeCCeeccCccchHHHHHHHHHHHHcCC-CEEE
Confidence 0346777888888899999999999999643 89999999988887 9999999988777 4444
Q ss_pred ---e--cCCCCceEEEEcC--CcC--ceeEeeecCC--CCCCCeEEEEEEEEChhhHhhcccCCC--Cc---ccchHHHH
Q 020113 136 ---V--DEPSKYGVVVMEE--TTG--KVEKFVEKPK--NFVGNKINAGIYLLNPSVLDRIELKPT--SI---EKEVFPEI 199 (331)
Q Consensus 136 ---~--~~~~~~~~v~~d~--~~~--~v~~~~ek~~--~~~~~~~~~Giy~~~~~~l~~l~~~~~--~~---~~~~l~~l 199 (331)
+ +++..||++..++ + + ++..+.|||. .+.++++++|+|+|++++|+.+..... .. ..++++.+
T Consensus 159 ~~~~~~~~~~~~g~v~~~~~~~-g~~~v~~~~Ekp~~~~~~~~~~~~GiYi~~~~~l~~l~~~~~~~~~e~~l~d~i~~l 237 (281)
T 3juk_A 159 IEEVALEEVSKYGVIRGEWLEE-GVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRTQ 237 (281)
T ss_dssp EEECCTTTGGGSEEEEEEEEET-TEEEEEEEEESCCTTTCSCSEEEEEEEEECTTHHHHHHTCCCCGGGSCCHHHHHHHH
T ss_pred EEEechhhcccCCEEEeccCCC-CceEEeEEEECcCCCCCCcceeEEEEEEECHHHHHHHHhcCCCCCCceeHHHHHHHH
Confidence 3 5577899999986 5 7 9999999987 456789999999999999987743211 11 25678888
Q ss_pred HhcCcEEEEEeCceEEecCCHHHHHHHHHHHHhhh
Q 020113 200 AAENKLFAMVLPGFWMDIGQPKDYITGLRLYLDFL 234 (331)
Q Consensus 200 ~~~~~i~~~~~~~~~~~i~t~~d~~~a~~~~l~~~ 234 (331)
+.++++.+|+++++|.|++||+||.+|++.++..-
T Consensus 238 ~~~~~v~~~~~~g~~~dIgt~~d~~~a~~~l~~~~ 272 (281)
T 3juk_A 238 AKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKKR 272 (281)
T ss_dssp HHHSCCEEEECCSEEEETTSHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhch
Confidence 88889999999999999999999999999888653
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=4.1e-36 Score=262.65 Aligned_cols=226 Identities=25% Similarity=0.391 Sum_probs=195.1
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccC-hHHHHHHHHHhhhccCeEEEEee
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQ-PEVMLNFLKEFEKKLEIKITCSQ 79 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~-~~~i~~~~~~~~~~~~~~v~~~~ 79 (331)
|+|||||||.|+||+|+|..+||+|+|++|+|||+|+++.+.++|+++|+|++++. .+.+.+++.+ ...++.++.+..
T Consensus 25 m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~-~~~~~~~i~~~~ 103 (269)
T 4ecm_A 25 MKGIILAGGTGSRLYPITKVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGS-GQEFGVSFTYRV 103 (269)
T ss_dssp EEEEEECCSCCGGGTTTTSSSCGGGSEETTEEHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT-SGGGTCEEEEEE
T ss_pred cEEEEECCCCccccccccCCCCceecEECCEEHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhh-ccccCceEEEee
Confidence 68999999999999999999999999999999999999999999999999999875 3677777764 345677888887
Q ss_pred CCcccCChHHHHHHHhhccCCCCCcEEEEeCCeeccccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCcCceeE
Q 020113 80 ETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETTGKVEK 156 (331)
Q Consensus 80 ~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~~~v~~ 156 (331)
+..+.|++++++.+++.+..+ +|++++||+++..++.++++.|.+.+++++++ +.++..|+++..++ +++..
T Consensus 104 ~~~~~G~~~al~~a~~~~~~~---~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d~--g~v~~ 178 (269)
T 4ecm_A 104 QDKAGGIAQALGLCEDFVGND---RMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVDDPERFGVANIQN--RKIIE 178 (269)
T ss_dssp CSSCCCHHHHHHTTHHHHTTS---EEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEECSCGGGSEEEEEET--TEEEE
T ss_pred CCccCcHHHHHHHHHHhcCCC---cEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEECCCCCCceEEEEcC--CEEEE
Confidence 788889999999999988632 99999999998889999999999888888777 56778899999884 79999
Q ss_pred eeecCCCCCCCeEEEEEEEEChhhHhhcccC----CCCc-ccchHHHHHhcCcEEEEEeCceEEecCCHHHHHHHHHHHH
Q 020113 157 FVEKPKNFVGNKINAGIYLLNPSVLDRIELK----PTSI-EKEVFPEIAAENKLFAMVLPGFWMDIGQPKDYITGLRLYL 231 (331)
Q Consensus 157 ~~ek~~~~~~~~~~~Giy~~~~~~l~~l~~~----~~~~-~~~~l~~l~~~~~i~~~~~~~~~~~i~t~~d~~~a~~~~l 231 (331)
+.|||..+.+.++++|+|+|++++++.+... ...+ ..++++.+.+.+++.++..+++|.|++||+||.++++.++
T Consensus 179 ~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~ge~~l~d~l~~l~~~g~v~~~~~~~~~~dIgt~~dl~~a~~~l~ 258 (269)
T 4ecm_A 179 IEEKPKEPKSSYAVTGIYLYDSKVFSYIKELKPSARGELEITDINNWYLKRGVLTYNEMSGWWTDAGTHVSLQRANALAR 258 (269)
T ss_dssp EEESCSSCSCSEEEEEEEEECTTHHHHHTSCCBCTTSCBCHHHHHHHHHHTTCEEEEECCSCEEECSSHHHHHHHHHHTT
T ss_pred EEECCCCCCCcEEEEEEEEECHHHHHhhhhcCCCCCCeeeHHHHHHHHHHcCCEEEEEeCCEEEeCCCHHHHHHHHHHHH
Confidence 9999987788999999999999998777432 1112 2567888888889999999999999999999999998765
Q ss_pred h
Q 020113 232 D 232 (331)
Q Consensus 232 ~ 232 (331)
+
T Consensus 259 ~ 259 (269)
T 4ecm_A 259 D 259 (269)
T ss_dssp T
T ss_pred h
Confidence 3
No 10
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=100.00 E-value=4.8e-35 Score=254.61 Aligned_cols=228 Identities=30% Similarity=0.558 Sum_probs=184.0
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhc-cCeE-----
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKK-LEIK----- 74 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~-~~~~----- 74 (331)
|+|||||||.|+||+|+|..+||+|+|++|+|||+|+++.+.++|+++|+|+++++.+.+++++.+.... .++.
T Consensus 3 ~~avIlAaG~gtRl~~lt~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (259)
T 1tzf_A 3 SKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHMAE 82 (259)
T ss_dssp CEEEEEECSCC--------CCCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEEGGG
T ss_pred cEEEEECCCCcccCCCccCCCCccccEECCEEHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhcccccccccccccc
Confidence 6899999999999999999999999999999999999999999999999999998888888888763210 0122
Q ss_pred --------------EEEeeCCcccCChHHHHHHHhhccCCCCCcEEEEeCCeeccccHHHHHHHHhhcCCceEEE-ecCC
Q 020113 75 --------------ITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKQMIEFHRGRGGEASIM-VDEP 139 (331)
Q Consensus 75 --------------v~~~~~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~~~l~~~l~~~~~~~~~~~i~-~~~~ 139 (331)
+.+..+..+.|++++++.+++.+... ++|++++||.+++.++.++++.|.+.++.+++. +.++
T Consensus 83 ~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~~--~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 160 (259)
T 1tzf_A 83 NRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDD--EAFLFTYGDGVADLDIKATIDFHKAHGKKATLTATFPP 160 (259)
T ss_dssp TEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTTS--SCEEEEETTEEECCCHHHHHHHHHHHCCSEEEEEECCC
T ss_pred cceeeeeccccccceeeeecccccCcHHHHHHHHHhcCCC--CcEEEEECCEecccCHHHHHHHHHHhCCeEEEEEecCC
Confidence 22223345789999999999988422 289999999999889999999998878777777 6677
Q ss_pred CCceEEEEcCCcCceeEeeecCCCCCCCeEEEEEEEEChhhHhhcccCCCCcccchHHHHHhcCcEEEEEeCceEEecCC
Q 020113 140 SKYGVVVMEETTGKVEKFVEKPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAAENKLFAMVLPGFWMDIGQ 219 (331)
Q Consensus 140 ~~~~~v~~d~~~~~v~~~~ek~~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~l~~l~~~~~i~~~~~~~~~~~i~t 219 (331)
..|+++.+| + +++..+.|||... ..++++|+|+|++++++.+.....+++.++++.+++++++.+++++++|.|++|
T Consensus 161 ~~~g~v~~~-~-g~v~~~~ekp~~~-~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~dI~t 237 (259)
T 1tzf_A 161 GRFGALDIQ-A-GQVRSFQEKPKGD-GAMINGGFFVLNPSVIDLIDNDATTWEQEPLMTLAQQGELMAFEHPGFWQPMDT 237 (259)
T ss_dssp CCSEEEEEE-T-TEEEEEEESCSCC-SCCEECCCEEECGGGGGGCCSTTCCTTTHHHHHHHHTTCEEEEEECSCEEECCS
T ss_pred CCccEEEEc-C-CEEEEEEecCCCC-CceEEEEEEEeCHHHHHhhcccccccHHHHHHHHHHcCCEEEEEeCcEEEeCCC
Confidence 889999888 5 8999999998643 568999999999999988755444566788888888889999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 020113 220 PKDYITGLRLYLDF 233 (331)
Q Consensus 220 ~~d~~~a~~~~l~~ 233 (331)
|+||.++++.+...
T Consensus 238 ~~d~~~a~~~~~~~ 251 (259)
T 1tzf_A 238 LRDKVYLEGLWEKG 251 (259)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999887643
No 11
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=4.7e-34 Score=253.85 Aligned_cols=228 Identities=26% Similarity=0.344 Sum_probs=187.8
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhh---h--------
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFE---K-------- 69 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~---~-------- 69 (331)
|+|||||||.|+||+|+|..+||+|+|++|+|||+|+++.+.++|+++++|++++..+.+++++.... +
T Consensus 9 ~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~ 88 (302)
T 2e3d_A 9 KKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKR 88 (302)
T ss_dssp CEEEEECCSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHHHHHHC----C
T ss_pred cEEEEECCcCcccCCccccCCCceeeEECCeEHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhhhhhhhhccch
Confidence 68999999999999999999999999999999999999999999999999999988788888876411 0
Q ss_pred ----------ccCeEEEEeeCCcccCChHHHHHHHhhccCCCCCcEEEEeCCeecc-----c---cHHHHHHHHhhcCCc
Q 020113 70 ----------KLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISE-----Y---PLKQMIEFHRGRGGE 131 (331)
Q Consensus 70 ----------~~~~~v~~~~~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~-----~---~l~~~l~~~~~~~~~ 131 (331)
.++.++.++.+..+.|++++++.+++.+.++ +|+|++||.+++ . ++.++++.|.+.++
T Consensus 89 ~~l~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~~~~~---~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~- 164 (302)
T 2e3d_A 89 QLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDE---PVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH- 164 (302)
T ss_dssp HHHHHHHHTSCTTCEEEEEECSSCCCHHHHHHHTHHHHCSS---CEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC-
T ss_pred hhhhhhhhccccCcceEEeeCCccCCHHHHHHHHHHHcCCC---cEEEEcCCccccCccccchHHHHHHHHHHHHhcCC-
Confidence 1356777777778899999999999998632 899999999876 2 79999999987776
Q ss_pred eEEE---ecCCCCceEEEEc----CCcC---ceeEeeecCC--CCCCCeEEEEEEEEChhhHhhcccCC-----CCcccc
Q 020113 132 ASIM---VDEPSKYGVVVME----ETTG---KVEKFVEKPK--NFVGNKINAGIYLLNPSVLDRIELKP-----TSIEKE 194 (331)
Q Consensus 132 ~~i~---~~~~~~~~~v~~d----~~~~---~v~~~~ek~~--~~~~~~~~~Giy~~~~~~l~~l~~~~-----~~~~~~ 194 (331)
+++. ..++..|+++..+ ++ + ++..+.|||. .+.+.++++|+|+|++++++.+.... .....+
T Consensus 165 ~~i~~~~~~~~~~yg~v~~~~~~~~~-g~~~~v~~~~ekp~~~~~~~~~~~~Giyi~~~~~l~~l~~~~~~~~~~~~l~d 243 (302)
T 2e3d_A 165 SQIMVEPVADVTAYGVVDCKGVELAP-GESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTPPGAGDEIQLTD 243 (302)
T ss_dssp EEEEEEECSCGGGSEEEECTTCCCCT-TCEEEECEEEESCCTTTCSCSEEEEEEEEECTTHHHHHTCCCC----CCCHHH
T ss_pred cEEEEEEccCCCCccEEEecccccCC-CCceeEEEEEECCCCCccccceEEEEEEEECHHHHHHHHhhCCCCCCceehHH
Confidence 5544 5566789998874 34 6 8999999985 34567999999999999988774321 111246
Q ss_pred hHHHHHhcCcEEEEEeCceEEecCCHHHHHHHHHHHHhh
Q 020113 195 VFPEIAAENKLFAMVLPGFWMDIGQPKDYITGLRLYLDF 233 (331)
Q Consensus 195 ~l~~l~~~~~i~~~~~~~~~~~i~t~~d~~~a~~~~l~~ 233 (331)
+++.+++.+++.+++++++|.|++||++|.++++.++.+
T Consensus 244 ~i~~l~~~~~v~~~~~~~~~~DIgt~~d~~~a~~~~~~~ 282 (302)
T 2e3d_A 244 AIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIR 282 (302)
T ss_dssp HHHHHHHHSCEEEEECCSCEEECSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 777888778999999999999999999999999766543
No 12
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=100.00 E-value=6.8e-34 Score=251.06 Aligned_cols=226 Identities=24% Similarity=0.407 Sum_probs=188.7
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEec-cChHHHHHHHHHhhhccCeEEEEee
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAIN-YQPEVMLNFLKEFEKKLEIKITCSQ 79 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~-~~~~~i~~~~~~~~~~~~~~v~~~~ 79 (331)
|++||||||.|+||+|+|...||+|+|++|+|||+|+++.|..+|+++|+|+++ ++.+.+++++.+ ++++++++.+..
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~-g~~~g~~i~~~~ 82 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGD-GSEFGIQLEYAE 82 (296)
T ss_dssp CEEEEECCCCCGGGHHHHTTSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT-SGGGTCEEEEEE
T ss_pred cEEEEECCCCCCcCCcccCCCCceeeEECCeeHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhc-ccccCceEEEec
Confidence 899999999999999999999999999999999999999999999999999886 556778888765 334677777777
Q ss_pred CCcccCChHHHHHHHhhccCCCCCcEEEEeCCee-ccccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCcCcee
Q 020113 80 ETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVI-SEYPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETTGKVE 155 (331)
Q Consensus 80 ~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i-~~~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~~~v~ 155 (331)
++.+.|+++++..+++.+.++ +++++.||.+ .+.++.++++.|.+.+.+++++ +.++..|+++.+|++ +++.
T Consensus 83 ~~~~~G~~~al~~a~~~i~~~---~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~~yg~v~~d~~-g~v~ 158 (296)
T 1mc3_A 83 QPSPDGLAQAFIIGETFLNGE---PSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDPERFGVVEFDDN-FRAI 158 (296)
T ss_dssp CSSCCCSTHHHHHTHHHHTTS---CEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEECSCCSSSBBCEEETT-EEEE
T ss_pred cCCCCCHHHHHHHHHHHhCCC---CEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEECCCcccCCEEEECCC-CcEE
Confidence 778899999999999998643 7888889985 4668999999997666666665 677889999999987 8999
Q ss_pred EeeecCCCCCCCeEEEEEEEEChhhHhhcccC----CCCc-ccchHHHHHhcCcEEEEEeC-ce-EEecCCHHHHHHHHH
Q 020113 156 KFVEKPKNFVGNKINAGIYLLNPSVLDRIELK----PTSI-EKEVFPEIAAENKLFAMVLP-GF-WMDIGQPKDYITGLR 228 (331)
Q Consensus 156 ~~~ek~~~~~~~~~~~Giy~~~~~~l~~l~~~----~~~~-~~~~l~~l~~~~~i~~~~~~-~~-~~~i~t~~d~~~a~~ 228 (331)
++.|||..+.++++++|+|+|++++++.+..- ...+ ..++++.+++.+++.++.+. ++ |.|++||+||.+++.
T Consensus 159 ~~~ekp~~~~s~~~~~Giy~~~~~~l~~~~~~~~~~~ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~ 238 (296)
T 1mc3_A 159 SLEEKPKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEAST 238 (296)
T ss_dssp ECCBSCSSCSCSEEEEEEEECCTHHHHHHHSCCCCSSSSCCHHHHHHHHHHTTCEEEEECCTTCEEEECCSHHHHHHHHH
T ss_pred EEEECCCCCCCCEEEEEEEEEcHHHHHHHHhcCccccCCccHHHHHHHHHhcCCeEEEEeCCCCEEEeCCCHHHHHHHHH
Confidence 99999987778899999999999998776321 1112 14567778888888888775 64 999999999999987
Q ss_pred HHH
Q 020113 229 LYL 231 (331)
Q Consensus 229 ~~l 231 (331)
.+.
T Consensus 239 ~~~ 241 (296)
T 1mc3_A 239 FVQ 241 (296)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 13
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=100.00 E-value=2e-33 Score=248.02 Aligned_cols=226 Identities=23% Similarity=0.404 Sum_probs=188.4
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEec-cChHHHHHHHHHhhhccCeEEEEee
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAIN-YQPEVMLNFLKEFEKKLEIKITCSQ 79 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~-~~~~~i~~~~~~~~~~~~~~v~~~~ 79 (331)
|++||||||.|+||+|+|...||+|+|++|+|||+|+++.+..+|+++|+|+++ ++.+.+++++.+ ++++++++.+..
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~-g~~~g~~i~~~~ 82 (295)
T 1lvw_A 4 MKGIVLAGGSGTRLYPITRAVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGD-GSQFGVRFSYRV 82 (295)
T ss_dssp CEEEEECCCCCSTTTTTTTSSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT-SGGGTSEEEEEE
T ss_pred eEEEEECCCCCCccccccCCCCceecEECCeeHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhh-ccccCceEEEee
Confidence 899999999999999999999999999999999999999999999999999886 556778888765 344677777777
Q ss_pred CCcccCChHHHHHHHhhccCCCCCcEEEEeCCee-ccccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCcCcee
Q 020113 80 ETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVI-SEYPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETTGKVE 155 (331)
Q Consensus 80 ~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i-~~~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~~~v~ 155 (331)
++.+.|+++++..+++.+.++ +++++.||.+ .+.++.++++.|.+....++++ +.++.+|+++.+|++ +++.
T Consensus 83 ~~~~~G~~~al~~a~~~i~~~---~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~~~g~v~~d~~-g~v~ 158 (295)
T 1lvw_A 83 QEEPRGIADAFIVGKDFIGDS---KVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYVRDPRPFGVVEFDSE-GRVI 158 (295)
T ss_dssp CSSCCCGGGHHHHTHHHHTTS---CEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEECSCCTTSEEEEECTT-SBEE
T ss_pred CCCCCChHHHHHHHHHHhCCC---cEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEECCCcccCCEEEECCC-CcEE
Confidence 778889999999999998643 7888889995 4678999999997766666655 677888999999987 9999
Q ss_pred EeeecCCCCCCCeEEEEEEEEChhhHhhccc-C---CCCc-ccchHHHHHhcCcEEEEEeC-c-eEEecCCHHHHHHHHH
Q 020113 156 KFVEKPKNFVGNKINAGIYLLNPSVLDRIEL-K---PTSI-EKEVFPEIAAENKLFAMVLP-G-FWMDIGQPKDYITGLR 228 (331)
Q Consensus 156 ~~~ek~~~~~~~~~~~Giy~~~~~~l~~l~~-~---~~~~-~~~~l~~l~~~~~i~~~~~~-~-~~~~i~t~~d~~~a~~ 228 (331)
++.|||..+.++++++|+|+|++++++.+.. . ...+ ..++++.+++.+++.++.+. + .|.|++||+||.+++.
T Consensus 159 ~~~ekp~~~~s~~~~~Giy~f~~~~l~~~~~~~~~~~ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~ 238 (295)
T 1lvw_A 159 SIEEKPSRPKSNYVVPGLYFYDNQVVEIARRIEPSDRGELEITSVNEEYLRMGKLRVELMGRGMAWLDTGTHDGLLEASS 238 (295)
T ss_dssp EEEESCSSCSCSEECCSEEEECTTHHHHHHHCCCCTTSCCCHHHHHHHHHHTTCEEEEEECTTCEECCCSSHHHHHHHHH
T ss_pred EEEECCCCCCCCEEEEEeEEEcHHHHHHHHhcCCcccCceeHHHHHHHHHHcCCcEEEEeCCCCeEEeCCCHHHHHHHHH
Confidence 9999998777889999999999999877632 1 1112 14667777888888777775 6 4999999999999987
Q ss_pred HHH
Q 020113 229 LYL 231 (331)
Q Consensus 229 ~~l 231 (331)
.+.
T Consensus 239 ~~~ 241 (295)
T 1lvw_A 239 FIE 241 (295)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 14
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=100.00 E-value=2.3e-33 Score=247.60 Aligned_cols=226 Identities=24% Similarity=0.396 Sum_probs=188.3
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEec-cChHHHHHHHHHhhhccCeEEEEee
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAIN-YQPEVMLNFLKEFEKKLEIKITCSQ 79 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~-~~~~~i~~~~~~~~~~~~~~v~~~~ 79 (331)
|++||||||.|+||+|+|...||+|+|++|+|||+|+++.|..+|+++|+|+++ ++.+.+++++.+ +++++.++.+..
T Consensus 3 ~~aIILAgG~gtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~-g~~~g~~i~~~~ 81 (293)
T 1fxo_A 3 RKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGD-GSNWGLDLQYAV 81 (293)
T ss_dssp EEEEEECCCCCTTTTTHHHHSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT-SGGGTCEEEEEE
T ss_pred ceEEEECCCCCCcCccccCCCCceeCeECCEeHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhc-ccccCceEEEee
Confidence 479999999999999999999999999999999999999999999999998884 456778888775 334677787777
Q ss_pred CCcccCChHHHHHHHhhccCCCCCcEEEEeCCee-ccccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCcCcee
Q 020113 80 ETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVI-SEYPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETTGKVE 155 (331)
Q Consensus 80 ~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i-~~~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~~~v~ 155 (331)
++.+.|+++++..+++.+.++ +++++.||.+ .+.++.++++.|.+.+.+++++ +.++..|+++.+|++ +++.
T Consensus 82 ~~~~~G~~~al~~a~~~i~~~---~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~~~g~v~~d~~-g~v~ 157 (293)
T 1fxo_A 82 QPSPDGLAQAFLIGESFIGND---LSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVLDPERYGVVEFDQG-GKAI 157 (293)
T ss_dssp CSSCCCGGGHHHHTHHHHTTS---EEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEECSCGGGSEEEEECTT-SCEE
T ss_pred CCCCCCHHHHHHHHHHHhCCC---CEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEECCCcccCcEEEECCC-CcEE
Confidence 788899999999999988642 8999999995 4568999999997766666655 677888999999987 9999
Q ss_pred EeeecCCCCCCCeEEEEEEEEChhhHhhccc-C---CCCcc-cchHHHHHhcCcEEEEEeC-c-eEEecCCHHHHHHHHH
Q 020113 156 KFVEKPKNFVGNKINAGIYLLNPSVLDRIEL-K---PTSIE-KEVFPEIAAENKLFAMVLP-G-FWMDIGQPKDYITGLR 228 (331)
Q Consensus 156 ~~~ek~~~~~~~~~~~Giy~~~~~~l~~l~~-~---~~~~~-~~~l~~l~~~~~i~~~~~~-~-~~~~i~t~~d~~~a~~ 228 (331)
++.|||..+.++++++|+|+|++++++.+.. . ...++ .++++.+++.+++.++... + .|.|++||+||.+++.
T Consensus 158 ~~~ekp~~~~s~~~~~Giy~~~~~~l~~~~~~~~~~~ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~ 237 (293)
T 1fxo_A 158 SLEEKPLEPKSNYAVTGLYFYDQQVVDIARDLKPSPRGELEITDVNRAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQ 237 (293)
T ss_dssp EEEESCSSCSSSEEEEEEEEECTTHHHHHHHCCCCTTSSCCHHHHHHHHHHTTCEEEEECCTTSEEEECCSHHHHHHHHH
T ss_pred EEEECCCCCCCCeEEEEEEEEcHHHHHHHHhcCcccCCceeHHHHHHHHHhcCCeEEEEeCCCCEEEcCCCHHHHHHHHH
Confidence 9999998777889999999999999877632 1 11122 4677888888888888775 6 4999999999999987
Q ss_pred HHH
Q 020113 229 LYL 231 (331)
Q Consensus 229 ~~l 231 (331)
.+.
T Consensus 238 ~~~ 240 (293)
T 1fxo_A 238 FIA 240 (293)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 15
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=100.00 E-value=1e-33 Score=251.00 Aligned_cols=228 Identities=24% Similarity=0.362 Sum_probs=170.0
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhh------h-----
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFE------K----- 69 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~------~----- 69 (331)
|+|||||||.|+||+|+|..+||+|+|++|+|||+|+++.+.++|+++|+|++++..+.+++++.+.. .
T Consensus 15 ~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~ 94 (297)
T 2ux8_A 15 RKAVFPVAGLGTRFLPATKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAARGKS 94 (297)
T ss_dssp CEEEEEECCCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHHTTTCC
T ss_pred cEEEEECCCCccccCccccCCCceeeeECCeEHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhhhccch
Confidence 68999999999999999999999999999999999999999999999999999988788888875310 0
Q ss_pred --------ccCeEEEEeeCCcccCChHHHHHHHhhccCCCCCcEEEEeCCeecc---ccHHHHHHHHhhcCCceEEE---
Q 020113 70 --------KLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISE---YPLKQMIEFHRGRGGEASIM--- 135 (331)
Q Consensus 70 --------~~~~~v~~~~~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~---~~l~~~l~~~~~~~~~~~i~--- 135 (331)
..+.++.++.+..+.|++++++.+++.+.++ +|+|++||++++ .++.++++.|.+.++ .++.
T Consensus 95 ~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~~~~~---~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~-~~i~~~~ 170 (297)
T 2ux8_A 95 LDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCARDIVGDE---PFAVLLPDDFMFGQPGCLKQMVDAYNKVGG-NLICAEE 170 (297)
T ss_dssp GGGGTTSCCSTTSEEEEECCSCCCHHHHHHTTHHHHCSS---CEEEECTTEEEESSSCHHHHHHHHHHHHCS-EEEEEC-
T ss_pred hhhhhhcccCCCceEEEeCCCCCChHHHHHHHHHHcCCC---cEEEEeCCeecCCChHHHHHHHHHHHhcCC-CEEEEEe
Confidence 0234566666777889999999999988532 899999999876 569999999987765 4443
Q ss_pred e--cCCCCceEEEEcC--CcC--ceeEeeecCC--CCCCCeEEEEEEEEChhhHhhcccCCC----Cc-ccchHHHHHhc
Q 020113 136 V--DEPSKYGVVVMEE--TTG--KVEKFVEKPK--NFVGNKINAGIYLLNPSVLDRIELKPT----SI-EKEVFPEIAAE 202 (331)
Q Consensus 136 ~--~~~~~~~~v~~d~--~~~--~v~~~~ek~~--~~~~~~~~~Giy~~~~~~l~~l~~~~~----~~-~~~~l~~l~~~ 202 (331)
+ .++..|+++..++ + + ++..|.|||. ...+.++++|+|+|++++++.+..... .+ ..++++.+++.
T Consensus 171 ~~~~~~~~yg~v~~~~~~~-~~~~v~~~~ekp~~~~~~~~~~~~Giyi~~~~~l~~l~~~~~~~~~~~~l~d~i~~l~~~ 249 (297)
T 2ux8_A 171 VPDDQTHRYGIITPGTQDG-VLTEVKGLVEKPAPGTAPSNLSVIGRYILQPEVMRILENQGKGAGGEIQLTDAMQRMIGD 249 (297)
T ss_dssp ----------CCCCCCBCS-SEEEC--------------CCCEEEEEEECTHHHHHHHHTC--------CCTTGGGGTTT
T ss_pred cCcccCCCCCeEEecccCC-CceeEEEEEECCCCCCCCccEEEEEEEEECHHHHHHHHhhCCCCCCeeEHHHHHHHHHhc
Confidence 2 4567898887663 3 5 8899999984 345678999999999998887732111 11 24677778877
Q ss_pred CcEEEEEeCceEEecCCHHHHHHHHHHHHhh
Q 020113 203 NKLFAMVLPGFWMDIGQPKDYITGLRLYLDF 233 (331)
Q Consensus 203 ~~i~~~~~~~~~~~i~t~~d~~~a~~~~l~~ 233 (331)
+++.+++++++|.|+|||+||.++++.++..
T Consensus 250 ~~v~~~~~~~~w~dIgt~~dl~~a~~~~~~~ 280 (297)
T 2ux8_A 250 QPFHGVTFQGTRYDCGDKAGFIQANLAVALS 280 (297)
T ss_dssp SCEEEEECSSEEEETTSHHHHHHHHHHHHHH
T ss_pred CCEEEEEecceEEeCCCHHHHHHHHHHHHhc
Confidence 8999999999999999999999999877644
No 16
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=100.00 E-value=7e-33 Score=245.87 Aligned_cols=223 Identities=16% Similarity=0.210 Sum_probs=183.6
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCcee--CCcchHHHHHHHHHHcCCCEEEEEeccCh-HHHHHHHHHhhhccCeEEEE
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDF--ANKPMILHQIEALKAVGVTEVVLAINYQP-EVMLNFLKEFEKKLEIKITC 77 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi--~g~pli~~~l~~l~~~gi~~i~iv~~~~~-~~i~~~~~~~~~~~~~~v~~ 77 (331)
|+|||||||.|+||+| ||+|+|+ +|+|||+|+++.+.++|+++|++++++.. +.+.+++.+. ..++.++.+
T Consensus 6 ~~~vIlAaG~g~R~~~-----~K~l~~ig~~g~pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~-~~~~~~i~~ 79 (303)
T 3pnn_A 6 PTLFVLAAGMGSRYGS-----LKQLDGIGPGGDTIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTK-YEGRIPVEL 79 (303)
T ss_dssp CEEEEECTTCBCTTSS-----BCCCCCCSTTSCCHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHH-HTTTSCEEE
T ss_pred eEEEEECCCCcccCCC-----CceEeEcCCCCeeHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHH-hccCCcEEE
Confidence 5799999999999998 7999999 59999999999999999999999999884 7889888762 234556666
Q ss_pred eeCC---------------cccCChHHHHHHHhhccCCCCCcEEEEeCCeecccc-HHHHHHHHhh---cCCceEEE---
Q 020113 78 SQET---------------EPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYP-LKQMIEFHRG---RGGEASIM--- 135 (331)
Q Consensus 78 ~~~~---------------~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~~~-l~~~l~~~~~---~~~~~~i~--- 135 (331)
+.+. .+.|++++++.+++.+. + +|+|++||.+++.+ ++++++.|.+ .+++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i~-~---~~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 155 (303)
T 3pnn_A 80 VFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAIR-E---PFAVINADDFYGRNGFEVLARKLMTLEGKQGEYCMVGYR 155 (303)
T ss_dssp EECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTCC-S---CEEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEEEEEE
T ss_pred EecccccccccccccccccccCCcHHHHHHHHHhcC-C---CEEEEECCeecCHHHHHHHHHHHHHhccccCceEEEEEE
Confidence 6655 57899999999999983 2 89999999988776 9999999976 45667766
Q ss_pred ecCC-CCc-----eEEEEcCCcCceeEeeecCCC-------------------CCCCeEEEEEEEEChhhHhhccc----
Q 020113 136 VDEP-SKY-----GVVVMEETTGKVEKFVEKPKN-------------------FVGNKINAGIYLLNPSVLDRIEL---- 186 (331)
Q Consensus 136 ~~~~-~~~-----~~v~~d~~~~~v~~~~ek~~~-------------------~~~~~~~~Giy~~~~~~l~~l~~---- 186 (331)
+.++ +.| |++.+|++ ++|..+.|||.. +.++++++|+|+|++++|+.+..
T Consensus 156 ~~~~~~~~g~~~~G~v~~d~~-g~v~~i~Ekp~~~~~~~~~~~~~~~g~~~~~~~~~~i~~GiY~f~~~~~~~l~~~~~~ 234 (303)
T 3pnn_A 156 VGNTLSESGGVSRGVCQVDEK-HLLTGVVERTGIERTDGTISFRDETGKICTLAEDAPVSMNMWGFTPDYFDYSEELFIN 234 (303)
T ss_dssp GGGSCBTTBCEEEEEEEECTT-SBEEEEEEEEEEEEETTEEEEECTTSCEEEECTTCEEEEEEEEECTHHHHHHHHHHHH
T ss_pred CCCccCccCceeeeeEeeCCC-CcEEEEEECCCCccccccccccccccccccCCCCCEEEEEEEEECHHHHHHHHHHHHH
Confidence 5556 666 68888877 899999999853 35789999999999999887632
Q ss_pred ------CCC---CcccchHHHHHhcC--cEEEEEeCceEEecCCHHHHHHHHHHHHhhh
Q 020113 187 ------KPT---SIEKEVFPEIAAEN--KLFAMVLPGFWMDIGQPKDYITGLRLYLDFL 234 (331)
Q Consensus 187 ------~~~---~~~~~~l~~l~~~~--~i~~~~~~~~~~~i~t~~d~~~a~~~~l~~~ 234 (331)
... ....++++.+++++ ++.+++++++|.|++||+||.++++.+....
T Consensus 235 ~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~~~ 293 (303)
T 3pnn_A 235 FLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRELT 293 (303)
T ss_dssp HHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHHHH
T ss_pred HHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHHHH
Confidence 111 12246788888888 6999999999999999999999998876544
No 17
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=1.3e-32 Score=246.41 Aligned_cols=230 Identities=23% Similarity=0.348 Sum_probs=184.5
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhh------------
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFE------------ 68 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~------------ 68 (331)
|+|||||||.|+||+|+|..+||+|+|++|+|||+|+++.+.++|+++|+|++++..+.+.+++....
T Consensus 13 ~~aVIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~~~~~ 92 (323)
T 2pa4_A 13 KTVVVPAAGLGTRFLPATKTVPKELLPVVDTPGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLMERGKT 92 (323)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHHTTCH
T ss_pred eEEEEECCCCccccCccccCCCceeeeECCEEHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhccchh
Confidence 78999999999999999999999999999999999999999999999999999988778887764310
Q ss_pred -------h-ccCeEEEEeeCCcccCChHHHHHHHhhccCCCCCcEEEEeCCeecc--ccHHHHHHHHhhcCCceEEE---
Q 020113 69 -------K-KLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISE--YPLKQMIEFHRGRGGEASIM--- 135 (331)
Q Consensus 69 -------~-~~~~~v~~~~~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~--~~l~~~l~~~~~~~~~~~i~--- 135 (331)
. .++.++.++.++.+.|++++++.++..+..+. +.|+|++||.+++ .++.++++.|.+.++ .++.
T Consensus 93 ~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~l~~~~-d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~-~~i~~~~ 170 (323)
T 2pa4_A 93 DQVEIIRRAADLIKAVPVTQDKPLGLGHAVGLAESVLDDDE-DVVAVMLPDDLVLPTGVMERMAQVRAEFGG-SVLCAVE 170 (323)
T ss_dssp HHHHHTTHHHHHCEEEEEECSSCCCHHHHHHTTGGGSCSSC-CEEEEECTTEEEESSCHHHHHHHHHHTTCS-EEEEEEE
T ss_pred hhhhhhhccccCcceEEEeCCccCCcHHHHHHHHHHhcCCC-CeEEEEeCCcccCchHHHHHHHHHHHhcCC-cEEEEEE
Confidence 0 02456766667778899999999999886421 1399999999876 569999999987765 3443
Q ss_pred e--cCCCCceEEEEc----CCcC--ceeEeeecCC--CCCCCeEEEEEEEEChhhHhhcccCCC----Cc-ccchHHHHH
Q 020113 136 V--DEPSKYGVVVME----ETTG--KVEKFVEKPK--NFVGNKINAGIYLLNPSVLDRIELKPT----SI-EKEVFPEIA 200 (331)
Q Consensus 136 ~--~~~~~~~~v~~d----~~~~--~v~~~~ek~~--~~~~~~~~~Giy~~~~~~l~~l~~~~~----~~-~~~~l~~l~ 200 (331)
+ +++..|+++.++ ++ + ++..|.|||. ...+.+.++|+|+|++++++.+..... .+ ..++++.++
T Consensus 171 ~~~~~~~~yg~v~~d~~~~~~-~~~~V~~~~Ekp~~~~~~~~~~~~GiY~~~~~~~~~l~~~~~~~~ge~~l~d~i~~l~ 249 (323)
T 2pa4_A 171 VSEADVSKYGIFEIEADTKDS-DVKKVKGMVEKPAIEDAPSRLAATGRYLLDRKIFDALRRITPGAGGELQLTDAIDLLI 249 (323)
T ss_dssp CCGGGGGGSEEEEEEECCSST-TEEEEEEEEESCCTTTCSCSEEEEEEEEEETHHHHHHHHCCCCGGGCCCHHHHHHHHH
T ss_pred ecccccCCccEEEeCCcccCC-CceeEEEEEECCCCccccccEEEEEEEEECHHHHHHHHhhCCCCCCeEeHHHHHHHHH
Confidence 2 356789999877 43 4 8999999984 445679999999999999887733111 11 146788888
Q ss_pred hc-CcEEEEEeCceEEecCCHHHHHHHHHHHHhh
Q 020113 201 AE-NKLFAMVLPGFWMDIGQPKDYITGLRLYLDF 233 (331)
Q Consensus 201 ~~-~~i~~~~~~~~~~~i~t~~d~~~a~~~~l~~ 233 (331)
++ .++.+++++++|.|+|||+||.++++.++..
T Consensus 250 ~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~~~ 283 (323)
T 2pa4_A 250 DEGHPVHIVIHQGKRHDLGNPGGYIPACVDFGLS 283 (323)
T ss_dssp HTTCCEEEEECCSEEEECSSHHHHHHHHHHHHHT
T ss_pred HcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHhhc
Confidence 77 5799999999999999999999999777643
No 18
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=100.00 E-value=1.2e-32 Score=238.22 Aligned_cols=216 Identities=17% Similarity=0.266 Sum_probs=166.6
Q ss_pred EEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHH-cCCCEEEEEeccChHHHHHHHHHhhhccCe--EEEEee
Q 020113 3 ALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKA-VGVTEVVLAINYQPEVMLNFLKEFEKKLEI--KITCSQ 79 (331)
Q Consensus 3 avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~-~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~--~v~~~~ 79 (331)
+||||||.|+||+|+|..+||+|+|++|||||+|+++.+.+ +|++++++++++..+ +.+++.+..++++. ...+..
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gkpli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 80 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKATQLGIKQFYIAEL 80 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTEEHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHHHHHTCSSEEEEEE
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCeEHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHHHHcCCCCceEEEe
Confidence 79999999999999999999999999999999999999999 799999999988765 55555543222221 123455
Q ss_pred CCcccCChHHHHHHHhhcc----CCCCCcEEEEeCCeec-cccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCc
Q 020113 80 ETEPLGTAGPLALARDKLI----DDSGEPFFVLNSDVIS-EYPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETT 151 (331)
Q Consensus 80 ~~~~~G~~~al~~~~~~~~----~~~~~~~lv~~~D~i~-~~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~ 151 (331)
+..+.|++++++.+++.+. +.+ ++|+|++||.++ +.++.++ ..+++++++ +.++ +||++..|++
T Consensus 81 ~~~~~Gt~~av~~a~~~l~~~~~~~~-~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~~p-~yG~v~~d~~- 152 (255)
T 4evw_A 81 HTETRGQAETVTLGLEELAKQGVDYQ-GSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGGGD-NWSFAKPEHA- 152 (255)
T ss_dssp SSCCSSHHHHHHHHHHHHHHTTCCCC-SCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECCSS-CSCEEEESST-
T ss_pred CCCCCCHHHHHHHHHHHHhhcccCCC-CcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecCCC-ceeEEEECCC-
Confidence 6788999999999999983 112 289999999987 4555443 234556666 4554 9999999987
Q ss_pred C--ceeEeeecCCCCCCCeEEEEEEEEChh-hH-----hhcccC------CCCcccchHHHHHhcC-cEEEEEeC-ceEE
Q 020113 152 G--KVEKFVEKPKNFVGNKINAGIYLLNPS-VL-----DRIELK------PTSIEKEVFPEIAAEN-KLFAMVLP-GFWM 215 (331)
Q Consensus 152 ~--~v~~~~ek~~~~~~~~~~~Giy~~~~~-~l-----~~l~~~------~~~~~~~~l~~l~~~~-~i~~~~~~-~~~~ 215 (331)
+ +|..+.||+ +.++++++|+|+|++. .+ +.+... ...+..++++.+++++ ++.++.++ ++|.
T Consensus 153 g~~~V~~i~EK~--~~s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~~~~~gE~~ltd~i~~li~~g~~v~~~~~~~~~w~ 230 (255)
T 4evw_A 153 GSTKVIQTAEKN--PISDLCSTGLYHFNRKEDYLEAYREYVARPSQEWERGELYIAPLYNELIQKGLNIHYHLIARHEVI 230 (255)
T ss_dssp TCCBEEEEESSS--CSSSEEEEEEEEESCHHHHHHHHHHHHTSCGGGCSCSCCCSTTHHHHHHHTTCCEEEEECCGGGCE
T ss_pred CCeEEEEEEecc--CccCcEEEeEEEECcHHHHHHHHHHHHhcccccccCCeEehHHHHHHHHHCCCEEEEEEeccccEE
Confidence 7 999999993 4578999999999985 22 222222 1223357889998887 48889885 8999
Q ss_pred ecCCHHHHHHHHHH
Q 020113 216 DIGQPKDYITGLRL 229 (331)
Q Consensus 216 ~i~t~~d~~~a~~~ 229 (331)
|++||++|.++...
T Consensus 231 digt~~~l~~~~~~ 244 (255)
T 4evw_A 231 FCGVPDEYTDFLRQ 244 (255)
T ss_dssp ECCSHHHHHHHHHC
T ss_pred ECCCHHHHHHHHhc
Confidence 99999999998653
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.97 E-value=2.2e-30 Score=230.54 Aligned_cols=222 Identities=20% Similarity=0.296 Sum_probs=148.7
Q ss_pred CeEEEEeCCCCcccCCCCC-CCCCCCcee-CCcchHHHHHHHHHHcCCCEEEEEeccCh-HHHHHHHHHhhhccCe-EEE
Q 020113 1 MKALILVGGFGTRLRPLTL-SVPKPLVDF-ANKPMILHQIEALKAVGVTEVVLAINYQP-EVMLNFLKEFEKKLEI-KIT 76 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~-~~pK~llpi-~g~pli~~~l~~l~~~gi~~i~iv~~~~~-~~i~~~~~~~~~~~~~-~v~ 76 (331)
|+|||||||.|+||+|+|. ..||+|+|+ +|+|||+|+++.+.++ +++|+|++++.. +.+.+++.+. ++. ++.
T Consensus 5 ~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~~---~~~~~~~ 80 (308)
T 2qh5_A 5 IKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHKSLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNE---IKNKSVG 80 (308)
T ss_dssp EEEEEECC-------------CCGGGCTTBTTBCHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTTT---CSSCEEE
T ss_pred cEEEEEcCCCCccCCccCCCCCCCEEEECCCCCCHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHHh---hCCCccE
Confidence 5799999999999999996 799999999 5999999999999999 999999998764 5667776651 344 555
Q ss_pred EeeCCcccCChHHHHHHHhhccCCCCCcEEEEeCCeec-ccc-HHHHHHH---HhhcCCceEEE---ecCCCCceEEEEc
Q 020113 77 CSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS-EYP-LKQMIEF---HRGRGGEASIM---VDEPSKYGVVVME 148 (331)
Q Consensus 77 ~~~~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~-~~~-l~~~l~~---~~~~~~~~~i~---~~~~~~~~~v~~d 148 (331)
++.++.+.|++.++..++..+..+ ++|++++||.++ +.+ +.++++. |.+.++.+++. ..++..|+++..+
T Consensus 81 ~i~~~~~~gt~~al~~a~~~l~~~--~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g~i~~d 158 (308)
T 2qh5_A 81 FLLESLSKNTANAIALSALMSDKE--DLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSIDKPNTEFGYIESP 158 (308)
T ss_dssp EEEESSCCCHHHHHHHHHHTSCTT--SEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTSEEEECS
T ss_pred EEeCCCCCChHHHHHHHHHHhCCC--CeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEecCCCCCCceEEEEC
Confidence 666677889999999999988422 159999999987 555 8999987 66667777766 4456789999887
Q ss_pred CCcCceeEeeecCCCCC--------CCeEEEEEEEEChhhH-hhccc---------------CC------CCc---ccch
Q 020113 149 ETTGKVEKFVEKPKNFV--------GNKINAGIYLLNPSVL-DRIEL---------------KP------TSI---EKEV 195 (331)
Q Consensus 149 ~~~~~v~~~~ek~~~~~--------~~~~~~Giy~~~~~~l-~~l~~---------------~~------~~~---~~~~ 195 (331)
++ ++|..|.|||.... +.++++|+|+|+++.| +.+.. .. ..+ +.++
T Consensus 159 ~~-~~V~~~~Ekp~~~~~~~~~~~g~~~~n~Giy~~~~~~ll~~l~~~~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 237 (308)
T 2qh5_A 159 NG-LDVKRFIEKPSLDKAIEFQKSGGFYFNSGMFVFQAGVFLDELKKHAPTILKGCERAFESLENAYFFEKKIARLSEKS 237 (308)
T ss_dssp SS-SBCSEEEESCCHHHHHHHHHHCCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHHHHGGGCEEECCSSSCEEEECHHH
T ss_pred CC-CEEEEEEECCChHHHHHHhhcCCeEEEeEEEEEEHHHHHHHHHHhChHHHHHHHHHhhccccccccchhhhhhhHHH
Confidence 66 89999999986421 4689999999999875 32210 00 111 1233
Q ss_pred HH--------H-HHhc-CcEEEEEeCceEEecCCHHHHHHHHHH
Q 020113 196 FP--------E-IAAE-NKLFAMVLPGFWMDIGQPKDYITGLRL 229 (331)
Q Consensus 196 l~--------~-l~~~-~~i~~~~~~~~~~~i~t~~d~~~a~~~ 229 (331)
++ . ++++ .++.+++++++|.|++||++|.+++..
T Consensus 238 ~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~ 281 (308)
T 2qh5_A 238 MQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAAN 281 (308)
T ss_dssp HHTSCCCCHHHHTTTTCSCEEEEECCSCCBC-------------
T ss_pred HhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhc
Confidence 33 2 4554 579999999999999999999999764
No 20
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.96 E-value=6.8e-28 Score=208.31 Aligned_cols=218 Identities=19% Similarity=0.224 Sum_probs=168.1
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (331)
.|||||+|.|+|| | ||+|+|++|+|||+|+++.+.++|+++|+|+++ .+.+++++.+ ++.++.+..+.
T Consensus 4 ~aiIlA~G~stRl-p-----~K~L~~i~GkPli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~----~g~~v~~~~~~ 71 (252)
T 3oam_A 4 TVVIPARYQSTRL-P-----GKPLADIGGKPMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA----FGGVVCMTSPN 71 (252)
T ss_dssp EEEEECCCCCSSS-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH----TTCEEEECCTT
T ss_pred EEEEecCcCCCCC-C-----CcceeeECCEEHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH----cCCEEEEcCCC
Confidence 5899999999999 4 699999999999999999999999999999985 4667777765 46777776667
Q ss_pred cccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEE---ecCCCCc-----eEEEEcCCc
Q 020113 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIM---VDEPSKY-----GVVVMEETT 151 (331)
Q Consensus 82 ~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~---~~~~~~~-----~~v~~d~~~ 151 (331)
.+.|++. +..++..+.....+.|++++||. +...++.++++.|.+.+++++++ +.++..| +.+.+|++
T Consensus 72 ~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~d~~- 149 (252)
T 3oam_A 72 HQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKS- 149 (252)
T ss_dssp CCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEECTT-
T ss_pred CCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEECCC-
Confidence 7788877 66666766311223899999998 44677999999998877777666 5666666 88999988
Q ss_pred CceeEeeecCCC-------------CCCCeEEEEEEEEChhhHhhcc-cCCCCccc----chHHHHHhcCcEEEEEeC-c
Q 020113 152 GKVEKFVEKPKN-------------FVGNKINAGIYLLNPSVLDRIE-LKPTSIEK----EVFPEIAAENKLFAMVLP-G 212 (331)
Q Consensus 152 ~~v~~~~ek~~~-------------~~~~~~~~Giy~~~~~~l~~l~-~~~~~~~~----~~l~~l~~~~~i~~~~~~-~ 212 (331)
|++..|.++|-. +...+.++|+|+|++++|+.+. .....+++ +.++.+....++.++..+ .
T Consensus 150 g~v~~fsr~~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E~le~lr~l~~G~~i~~~~~~~~ 229 (252)
T 3oam_A 150 GYALYFSRATIPWDRDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEA 229 (252)
T ss_dssp SBEEEEESSCSSCCHHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHSCCCHHHHHHTCTTHHHHHTTCCEEEEECSSC
T ss_pred CeEEEEeCCCCCCCCCccccccccccccceEEEEEEEcCHHHHHHHHcCCCCcccccchhHHHHHHHCCCeEEEEEecCC
Confidence 999999887521 2367999999999999998873 22333332 234443334478888764 4
Q ss_pred eEEecCCHHHHHHHHHHHHhh
Q 020113 213 FWMDIGQPKDYITGLRLYLDF 233 (331)
Q Consensus 213 ~~~~i~t~~d~~~a~~~~l~~ 233 (331)
+|.+||||+||.++++.+..+
T Consensus 230 ~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 230 PPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp CCCCCCSHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHhh
Confidence 689999999999998877554
No 21
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.96 E-value=3.7e-28 Score=210.22 Aligned_cols=213 Identities=22% Similarity=0.332 Sum_probs=156.9
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
|+|||||||.|+||+|+|...||+|+|++|+|||+|+++.+.++|+++++|++++..+.+..+... +++.+....+
T Consensus 26 ~~aiIlAaG~gtRl~plt~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~----~~~~iv~~~~ 101 (254)
T 1jyk_A 26 VKAIILAAGLGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKEK----YGVRLVFNDK 101 (254)
T ss_dssp CEEEEEECSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHHH----HCCEEEECTT
T ss_pred ceEEEECCCCcccCCcccCCCCCEEeeECCEEHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHHHh----CCcEEEECCC
Confidence 579999999999999999999999999999999999999999999999999998776666554433 3555544333
Q ss_pred CcccCChHHHHHHHhhccCCCCCcEEEEeCCeeccccHHHHHHHHhhcCCceEEEecCC-CCceEEEEcCCcCceeEeee
Q 020113 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKQMIEFHRGRGGEASIMVDEP-SKYGVVVMEETTGKVEKFVE 159 (331)
Q Consensus 81 ~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~~~l~~~l~~~~~~~~~~~i~~~~~-~~~~~v~~d~~~~~v~~~~e 159 (331)
..+.|++++++.+++.+. ++++++||+++..++ ++.+.+.+...++...++ ..|+++ +|++ +++..+.|
T Consensus 102 ~~~~g~~~al~~a~~~~~-----~~lv~~~D~~~~~~~---~~~~~~~~~~~t~~~~~~~~~~~v~-~d~~-g~v~~~~e 171 (254)
T 1jyk_A 102 YADYNNFYSLYLVKEELA-----NSYVIDADNYLFKNM---FRNDLTRSTYFSVYREDCTNEWFLV-YGDD-YKVQDIIV 171 (254)
T ss_dssp TTTSCTHHHHHTTGGGCT-----TEEEEETTEEESSCC---CCSCCCSEEEEECEESSCSSCCEEE-ECTT-CBEEEEEC
T ss_pred ccCCCcHHHHHHHHHHCC-----CEEEEeCCcccCHHH---HHHHHhCCceEEEEcccCCCCeEEE-ECCC-CeEEEEEE
Confidence 446799999999988872 689999999765442 222222222223224444 367755 7777 89999999
Q ss_pred cCCCCCCCeEEEEEEEEChhhHhhc--------ccC--CCCcccchHHHHHhcCcEEEEEeC-ceEEecCCHHHHHHHHH
Q 020113 160 KPKNFVGNKINAGIYLLNPSVLDRI--------ELK--PTSIEKEVFPEIAAENKLFAMVLP-GFWMDIGQPKDYITGLR 228 (331)
Q Consensus 160 k~~~~~~~~~~~Giy~~~~~~l~~l--------~~~--~~~~~~~~l~~l~~~~~i~~~~~~-~~~~~i~t~~d~~~a~~ 228 (331)
++. ..++++|+|+|+++.++.+ ..+ ...+-.++++.+....++.++.++ ++|.+|+|++||.++++
T Consensus 172 ~~~---~~~~~~Giy~~~~~~~~~l~~~l~~~~~~~~~~e~~~~d~~~~l~~~~~v~~~~~~~~~~~~Idt~edl~~a~~ 248 (254)
T 1jyk_A 172 DSK---AGRILSGVSFWDAPTAEKIVSFIDKAYVSGEFVDLYWDNMVKDNIKELDVYVEELEGNSIYEIDSVQDYRKLEE 248 (254)
T ss_dssp CCS---SEEBCCSEEEECHHHHHHHHHHHHHHHTTTCCTTCCTTHHHHTTGGGCCEEEEECCTTSEEECCSHHHHHHHHH
T ss_pred CCC---CCcEEEEEEEEcHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhCCeEEEEecCCeEEEcCCHHHHHHHHH
Confidence 753 4589999999998744322 111 111223456666666779999887 78999999999999987
Q ss_pred HH
Q 020113 229 LY 230 (331)
Q Consensus 229 ~~ 230 (331)
.+
T Consensus 249 ~l 250 (254)
T 1jyk_A 249 IL 250 (254)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 22
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.95 E-value=3.8e-28 Score=217.92 Aligned_cols=219 Identities=23% Similarity=0.297 Sum_probs=161.2
Q ss_pred CeEEEEeCCCCcccCCCC-CCCCCCCceeCC-cchHHHHHHHHHHc-CCCEEEEEeccCh-HHHHHHHHHhhhccCeEEE
Q 020113 1 MKALILVGGFGTRLRPLT-LSVPKPLVDFAN-KPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEKKLEIKIT 76 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt-~~~pK~llpi~g-~pli~~~l~~l~~~-gi~~i~iv~~~~~-~~i~~~~~~~~~~~~~~v~ 76 (331)
|++||||||.|+||+|+| ...||+|+|++| +|||+|+++.+..+ |+++++|++++.. ..+.+++.+.. . ..+
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~~-~--~~i- 77 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELP-D--ENI- 77 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTSC-G--GGE-
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhccc-c--ceE-
Confidence 799999999999999999 679999999998 99999999999997 8999999998763 56677766521 1 122
Q ss_pred EeeCCcccCChHHHHHHHhhccCCCCCcEEEEeCCeeccc--cHH----HHHHHHhhcCCceEEE---ecCCCCceEEEE
Q 020113 77 CSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEY--PLK----QMIEFHRGRGGEASIM---VDEPSKYGVVVM 147 (331)
Q Consensus 77 ~~~~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~~--~l~----~~l~~~~~~~~~~~i~---~~~~~~~~~v~~ 147 (331)
+.++.+.|++.++..+...+..+ +.+++++||.++.. ++. .+++.|.+.++.+++. ..+.+.||++..
T Consensus 78 -i~e~~~~gta~ai~~a~~~~~~~--~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~~~~~~yG~I~~ 154 (336)
T 2x65_A 78 -IAEPMKKNTAPACFIGTKLADDD--EPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPTRPETGYGYIEI 154 (336)
T ss_dssp -EEESSCCCHHHHHHHHHTTSCTT--CEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCCSCCSSSEEEEE
T ss_pred -EeCCCCCCcHHHHHHHHHhhCCC--CEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEeecccCCCCceEEEE
Confidence 34556789999999888766322 27999999997643 444 4455566656666666 334478999988
Q ss_pred cCC----cCceeEeeecCCCCC--------CCeEEEEEEEEChhhH-hhccc-CC----------C---CcccchHHH--
Q 020113 148 EET----TGKVEKFVEKPKNFV--------GNKINAGIYLLNPSVL-DRIEL-KP----------T---SIEKEVFPE-- 198 (331)
Q Consensus 148 d~~----~~~v~~~~ek~~~~~--------~~~~~~Giy~~~~~~l-~~l~~-~~----------~---~~~~~~l~~-- 198 (331)
+++ .+++..|.|||.... ..++++|+|+|+++.+ +.+.. .+ . ++..+.++.
T Consensus 155 ~~~~~~~~~~V~~f~EKp~~~~a~~~~~~g~y~~n~Giy~~~~~~ll~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~ 234 (336)
T 2x65_A 155 GEELEEGVHKVAQFREKPDLETAKKFVESGRFLWNSGMFLWKAREFIEEVKVCEPSIYENLKDVDPRNFEELKKAYEKVP 234 (336)
T ss_dssp EEEEETTEEEEEEEEESCCHHHHHHHHHHTCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHTTCCTTCHHHHHHHHHHSC
T ss_pred CCccCCCccEEEEEEECCChHHHHHHHhcCCeEEEeeeEEEEHHHHHHHHHHHCHHHHHHHHHhhhhhhhHHHHHHHhCc
Confidence 652 157999999986421 2489999999999876 33311 00 0 111233343
Q ss_pred -------HHh-cCcEEEEEeCceEEecCCHHHHHHH
Q 020113 199 -------IAA-ENKLFAMVLPGFWMDIGQPKDYITG 226 (331)
Q Consensus 199 -------l~~-~~~i~~~~~~~~~~~i~t~~d~~~a 226 (331)
+++ ..++++++.+++|.|++|+++|.++
T Consensus 235 ~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 235 SISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp CCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred cccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 333 3579999999999999999999998
No 23
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.94 E-value=3.2e-27 Score=212.04 Aligned_cols=218 Identities=21% Similarity=0.325 Sum_probs=156.1
Q ss_pred CeEEEEeCCCCcccCCCC-CCCCCCCceeCC-cchHHHHHHHHHHc-CCCEEEEEeccCh-HHHHHHHHHhhhccCeEEE
Q 020113 1 MKALILVGGFGTRLRPLT-LSVPKPLVDFAN-KPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEKKLEIKIT 76 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt-~~~pK~llpi~g-~pli~~~l~~l~~~-gi~~i~iv~~~~~-~~i~~~~~~~~~~~~~~v~ 76 (331)
|++||||||.|+||+|+| ..+||+|+|++| +|||+|+++.+..+ |+++++|++++.. ..+.+++.. ..+
T Consensus 3 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l~~------~~~- 75 (337)
T 2cu2_A 3 TYALVMAGGRGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADG------IRL- 75 (337)
T ss_dssp EEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCSS------SEE-
T ss_pred eEEEEEcCCCcccCCccCCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHhcc------Cce-
Confidence 579999999999999999 589999999998 99999999999998 8999999998763 444444432 222
Q ss_pred EeeCCcccCChHHHHHHHhhccC-CCCCcEEEEeCCeeccc--cHHHHHHH----HhhcCCceEEE---ecCCCCceEEE
Q 020113 77 CSQETEPLGTAGPLALARDKLID-DSGEPFFVLNSDVISEY--PLKQMIEF----HRGRGGEASIM---VDEPSKYGVVV 146 (331)
Q Consensus 77 ~~~~~~~~G~~~al~~~~~~~~~-~~~~~~lv~~~D~i~~~--~l~~~l~~----~~~~~~~~~i~---~~~~~~~~~v~ 146 (331)
+.++.+.|++.++..+.. +.. ...+.+++++||.++.. .|..+++. +.+ ++.+++. ..+++.||++.
T Consensus 76 -i~e~~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt~~i~p~~~~t~yG~I~ 152 (337)
T 2cu2_A 76 -LLEPLGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVALGLRPTRPETEYGYIR 152 (337)
T ss_dssp -EEESSCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEEEEECCSSCCSSSCEEE
T ss_pred -EecCCCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEEEeeccCCCCCCceEEE
Confidence 334567799999988877 531 11128999999997643 35554443 433 5556666 34457899998
Q ss_pred EcCC---cCceeEeeecCCCCC-------CCeEEEEEEEEChhhH-hhcccCC-C---Cc--------ccchHHH-----
Q 020113 147 MEET---TGKVEKFVEKPKNFV-------GNKINAGIYLLNPSVL-DRIELKP-T---SI--------EKEVFPE----- 198 (331)
Q Consensus 147 ~d~~---~~~v~~~~ek~~~~~-------~~~~~~Giy~~~~~~l-~~l~~~~-~---~~--------~~~~l~~----- 198 (331)
.+++ .+++..|.|||.... +.++++|+|+|+++.+ +.++... . .+ ..+.++.
T Consensus 153 ~~~~~~~~~~V~~f~EKp~~~~a~~~~~~g~~~n~Giy~f~~~~ll~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~s 232 (337)
T 2cu2_A 153 LGPREGAWYRGEGFVEKPSYAEALEYIRKGYVWNGGVFAFAPATMAELFRRHLPSHHEALERLLAGASLEEVYAGLPKIS 232 (337)
T ss_dssp EEEEETTEEEEEEEECCCCHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHCHHHHHHHHHHHTTCCHHHHHHTSCCCC
T ss_pred ECCcccccCeEEEEEeCCChHHHHHHhhcCCEEEEEEEEEeHHHHHHHHHHHCHHHHHHHHHHhcCCcHHHHHhhCccch
Confidence 8752 157999999986321 1699999999999876 5442110 0 00 0122222
Q ss_pred ----HHhc-CcEEEEEeCceEEecCCHHHHHHHHH
Q 020113 199 ----IAAE-NKLFAMVLPGFWMDIGQPKDYITGLR 228 (331)
Q Consensus 199 ----l~~~-~~i~~~~~~~~~~~i~t~~d~~~a~~ 228 (331)
++++ .++.+++.+++|.|++|+++|.++..
T Consensus 233 idy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~~ 267 (337)
T 2cu2_A 233 IDYGVMEKAERVRVVLGRFPWDDVGNWRALERVFS 267 (337)
T ss_dssp HHHHTGGGCSSEEEEEECSCEECCCSTTHHHHHHT
T ss_pred HHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHhh
Confidence 3443 57999999999999999999998844
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.94 E-value=3.3e-25 Score=190.98 Aligned_cols=212 Identities=21% Similarity=0.207 Sum_probs=155.5
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (331)
.|||||+|.|+||+ ||+|+|++|||||+|+++.+.++|+++|+|+++ .+.+++++.+ ++.++.+..+.
T Consensus 11 ~aIIlA~G~stRl~------~K~L~~i~GkPli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~----~g~~v~~~~~~ 78 (256)
T 3tqd_A 11 RVIIPARFDSTRLP------GKALVDIAGKPMIQHVYESAIKSGAEEVVIATD--DKRIRQVAED----FGAVVCMTSSD 78 (256)
T ss_dssp EEEEECCCC---CT------TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH----TTCEEEECCTT
T ss_pred eEEEEcCCCCCCCC------CCCeeeECCchHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH----cCCeEEEeCCC
Confidence 69999999999994 799999999999999999999999999999885 3567777665 46677666666
Q ss_pred cccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhhc-CCce-EEE--e------cCCCCceEEEEcC
Q 020113 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGR-GGEA-SIM--V------DEPSKYGVVVMEE 149 (331)
Q Consensus 82 ~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~-~~~~-~i~--~------~~~~~~~~v~~d~ 149 (331)
.+.|+.. +..+++.+.....+.++++.||. +....+.++++.+.+. ++++ ++. + .++..++ +.+|+
T Consensus 79 ~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vk-vv~d~ 156 (256)
T 3tqd_A 79 HQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTK-VVLNR 156 (256)
T ss_dssp CCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCE-EEECT
T ss_pred CCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccE-EEECC
Confidence 6677754 78888887421223899999999 3356799999999764 3344 333 2 3444444 45777
Q ss_pred CcCceeEeeecCCC-C-------------CCCeEEEEEEEEChhhHhhcc-cCCCCccc----chHHHHHhcCcEEEEEe
Q 020113 150 TTGKVEKFVEKPKN-F-------------VGNKINAGIYLLNPSVLDRIE-LKPTSIEK----EVFPEIAAENKLFAMVL 210 (331)
Q Consensus 150 ~~~~v~~~~ek~~~-~-------------~~~~~~~Giy~~~~~~l~~l~-~~~~~~~~----~~l~~l~~~~~i~~~~~ 210 (331)
+ |+++.|.++|-. + .+.+...|+|.|++++++.+. .....+|. +.++.|....++.+++.
T Consensus 157 ~-g~~l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s~lE~~e~leqlr~le~G~~i~~~~~ 235 (256)
T 3tqd_A 157 R-NYALYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDACPAEKMEALEQLRILWHGGRIHMVVA 235 (256)
T ss_dssp T-SBEEEEESSCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTTHHHHHTTCCCEEEEC
T ss_pred C-CEEeEEecCCCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHhCCCCcccchhhhHHHHHHHCCCeEEEEEe
Confidence 7 999999998641 1 256899999999999999884 33334433 23454444457999999
Q ss_pred Cce-EEecCCHHHHHHHHH
Q 020113 211 PGF-WMDIGQPKDYITGLR 228 (331)
Q Consensus 211 ~~~-~~~i~t~~d~~~a~~ 228 (331)
+++ |.+||||+||.++++
T Consensus 236 ~~~~~~~idtpeDl~~a~~ 254 (256)
T 3tqd_A 236 KSKCPPGVDTEEDLERVRA 254 (256)
T ss_dssp SSCCCCCCSSHHHHHHHHT
T ss_pred CCCCCCCcCCHHHHHHHHH
Confidence 875 899999999998864
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.93 E-value=3.9e-25 Score=191.38 Aligned_cols=214 Identities=21% Similarity=0.242 Sum_probs=159.2
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
+.|||||+|.|+|| | +|+|+|++|+|||+|+++.+.++|+++|+|+++ .+.+.+++.+ ++.++.+..+
T Consensus 19 ~~aIIlA~G~stRl-p-----~K~L~~i~GkPmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~----~g~~v~~~~~ 86 (264)
T 3k8d_A 19 FVVIIPARYASTRL-P-----GKPLVDINGKPMIVHVLERARESGAERIIVATD--HEDVARAVEA----AGGEVCMTRA 86 (264)
T ss_dssp CEEEEECCSCCSSS-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH----TTCEEEECCT
T ss_pred eEEEEEcCCCCCCC-C-----CcceeeECCeEHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH----cCCEEEEecC
Confidence 36999999999999 2 499999999999999999999999999999884 4566666665 4567766556
Q ss_pred CcccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEE---ecC------CCCceEEEEcC
Q 020113 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIM---VDE------PSKYGVVVMEE 149 (331)
Q Consensus 81 ~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~---~~~------~~~~~~v~~d~ 149 (331)
..+.|+.. +..+.+.+.....+.++++.||. +....++++++.+.+.+++++++ +.+ +.... +.+|+
T Consensus 87 ~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vk-Vv~d~ 164 (264)
T 3k8d_A 87 DHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVK-VVLDA 164 (264)
T ss_dssp TCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCE-EEECT
T ss_pred CCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceE-EEECC
Confidence 66677765 77777777421223899999999 44667999999998877776666 333 33333 45687
Q ss_pred CcCceeEeeecCCC-------------CCCCeEEEEEEEEChhhHhhcc-cCCCCccc----chHHHHHhcCcEEEEEeC
Q 020113 150 TTGKVEKFVEKPKN-------------FVGNKINAGIYLLNPSVLDRIE-LKPTSIEK----EVFPEIAAENKLFAMVLP 211 (331)
Q Consensus 150 ~~~~v~~~~ek~~~-------------~~~~~~~~Giy~~~~~~l~~l~-~~~~~~~~----~~l~~l~~~~~i~~~~~~ 211 (331)
+ |++..|.++|-. +.+.+.++|+|.|++++++.+. .....+|. +.++.|....++.++...
T Consensus 165 ~-g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~~lE~~e~leqlr~le~G~~I~~~~~~ 243 (264)
T 3k8d_A 165 E-GYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQ 243 (264)
T ss_dssp T-SBEEEEESSCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCCHHHHHHTCTTHHHHHTTCCEEEEECS
T ss_pred C-CeEEEEecCCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHhCCCChhhhHHHHHHHHHHHCCCceEEEEeC
Confidence 7 999999998631 2257999999999999998873 22333332 234444444578888654
Q ss_pred -ceEEecCCHHHHHHHHHH
Q 020113 212 -GFWMDIGQPKDYITGLRL 229 (331)
Q Consensus 212 -~~~~~i~t~~d~~~a~~~ 229 (331)
.+|.+||||+||.+++..
T Consensus 244 ~~~~~~IdtpeDl~~a~~~ 262 (264)
T 3k8d_A 244 EVPGTGVDTPEDLERVRAE 262 (264)
T ss_dssp CCCSCCCCSHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHH
Confidence 458999999999999764
No 26
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.92 E-value=3.7e-24 Score=184.23 Aligned_cols=215 Identities=17% Similarity=0.189 Sum_probs=159.5
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHH-HHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQI-EALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l-~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
.|||||+|.|+||+ +|+|+|++|+|||+|++ +.+.++++++|+|+++. +.+.+++.+ ++.++.+..+
T Consensus 3 ~aiIlA~G~stR~~------~K~L~~i~GkPli~~~i~~~~~~~~~~~vvVvt~~--~~i~~~~~~----~g~~v~~~~~ 70 (253)
T 4fcu_A 3 HIVIPARFSSSRLP------GKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDD--ERIAEICRA----EGVDVVLTSA 70 (253)
T ss_dssp EEEEECCSCCTTST------TGGGSEETTEEHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHT----TTCCEEECCT
T ss_pred EEEEEeCCCCCCCC------CCceeeECCeEhHHHHHHHHHHhcCCCEEEEECCH--HHHHHHHHH----cCCeEEEeCC
Confidence 48999999999995 49999999999999999 99999899999999863 556666654 4566655545
Q ss_pred CcccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhhcC--CceEEE--------ecCCCCceEEEEc
Q 020113 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGRG--GEASIM--------VDEPSKYGVVVME 148 (331)
Q Consensus 81 ~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~--~~~~i~--------~~~~~~~~~v~~d 148 (331)
..+.|+ +++..++..+.....+.++++.||. +....+.++++.+.+.+ ..++++ +.+|..+. +..|
T Consensus 71 ~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~~k-vv~d 148 (253)
T 4fcu_A 71 DHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVK-VVMS 148 (253)
T ss_dssp TCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCE-EEEC
T ss_pred CCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCccE-EEEC
Confidence 555666 5788888887532223899999999 34567999999998763 234554 24566654 4567
Q ss_pred CCcCceeEeeecCC----C---------CCCCeEEEEEEEEChhhHhhccc-CCCCccc----chHHHHHhcCcEEEEEe
Q 020113 149 ETTGKVEKFVEKPK----N---------FVGNKINAGIYLLNPSVLDRIEL-KPTSIEK----EVFPEIAAENKLFAMVL 210 (331)
Q Consensus 149 ~~~~~v~~~~ek~~----~---------~~~~~~~~Giy~~~~~~l~~l~~-~~~~~~~----~~l~~l~~~~~i~~~~~ 210 (331)
++ |+++.|.++|- . +...+.++|+|.|++++|+.+.. ....++. +.++.+....++.++..
T Consensus 149 ~~-g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~~le~~e~le~lr~l~~G~~I~~~~~ 227 (253)
T 4fcu_A 149 KQ-NEALYFSRATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAVA 227 (253)
T ss_dssp TT-SBEEEEESSCCSCCTTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCHHHHHHTCTTHHHHHTTCCEEEEEC
T ss_pred CC-CeEEEecCCCCCCCCCcccccccccccceeEEEEEEEeCHHHHHHHHhCCCCcccchhHHHHHHHHHCCCceEEEEe
Confidence 77 99999988642 1 23468899999999999988742 2333321 23444444447999999
Q ss_pred Cce-EEecCCHHHHHHHHHHHH
Q 020113 211 PGF-WMDIGQPKDYITGLRLYL 231 (331)
Q Consensus 211 ~~~-~~~i~t~~d~~~a~~~~l 231 (331)
+++ |.+||||+||.+++..+.
T Consensus 228 ~~~~~~~IdtpeDL~~a~~~l~ 249 (253)
T 4fcu_A 228 EANLPPGVDTQADLDRLNNMPV 249 (253)
T ss_dssp SSCCCCCCCSHHHHHHHHTSCG
T ss_pred CCCCCCCCCCHHHHHHHHHHHH
Confidence 998 999999999999987543
No 27
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.92 E-value=6.7e-24 Score=181.36 Aligned_cols=208 Identities=19% Similarity=0.237 Sum_probs=150.4
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (331)
.|||||||.|+||+ ||+|+|++|+|||+|+++.+.++ +++|+|++++ +.+.+++.+ + .++.+..+.
T Consensus 4 ~aiIlA~G~g~R~~------~K~l~~i~g~pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~----~-~~~~~~~~~ 69 (234)
T 2y6p_A 4 AVIIPARLGSTRLK------EKPLKNLLGKPLIRWVVEGLVKT-GERVILATDS--ERVKEVVED----L-CEVFLTPSD 69 (234)
T ss_dssp EEEEECCSCCTTTT------TGGGCEETTEEHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTT----T-SEEEECCTT
T ss_pred EEEEEcCCCCCCCC------CCcceeECCEEHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHh----c-eEEEECCcc
Confidence 68999999999996 79999999999999999999999 9999999875 556666654 2 455444444
Q ss_pred cccCChHHHHHHHhhccCCCCCcEEEEeCCe-ecc-ccHHHHHHHHhhcCCceEEE-ec-----CCCCceEEEEcCCcCc
Q 020113 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDV-ISE-YPLKQMIEFHRGRGGEASIM-VD-----EPSKYGVVVMEETTGK 153 (331)
Q Consensus 82 ~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~-i~~-~~l~~~l~~~~~~~~~~~i~-~~-----~~~~~~~v~~d~~~~~ 153 (331)
...|++.++ .+++.+.. +.+++++||. +.+ .++.++++.|.+.++.+++. .. ++..++ +..+++ ++
T Consensus 70 ~~~g~~~~~-~~~~~~~~---~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-g~ 143 (234)
T 2y6p_A 70 LPSGSDRVL-YVVRDLDV---DLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKEAYERPEDVK-VVLDRE-GY 143 (234)
T ss_dssp CCSHHHHHH-HHHTTCCC---SEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSGGGGCTTSCE-EEECTT-SB
T ss_pred cccchHHHH-HHHHhCCC---CEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHHHhcCCCceE-EEEcCC-CC
Confidence 455666654 55555532 3899999999 665 67999999998776444554 21 344444 344666 89
Q ss_pred eeEeeecCCC-CC-----CCeEEEEEEEEChhhHhhccc-CCCCcc-cc---hHHHHHhcCcEEEEEeCceEEecCCHHH
Q 020113 154 VEKFVEKPKN-FV-----GNKINAGIYLLNPSVLDRIEL-KPTSIE-KE---VFPEIAAENKLFAMVLPGFWMDIGQPKD 222 (331)
Q Consensus 154 v~~~~ek~~~-~~-----~~~~~~Giy~~~~~~l~~l~~-~~~~~~-~~---~l~~l~~~~~i~~~~~~~~~~~i~t~~d 222 (331)
+..+.+||.. .. ..+.++|+|+|+++.+..+.. ....++ .+ .++.+....++.+++.+++|.|++||+|
T Consensus 144 v~~~~e~~~~~~~~~~~~~~~~~~giy~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~g~~v~~~~~~~~~~dI~t~~d 223 (234)
T 2y6p_A 144 ALYFSRSPIPYFRKNDTFYPLKHVGIYGFRKETLMEFGAMPPSKLEQIEGLEQLRLLENGIKIKVLITENYYHGVDTEED 223 (234)
T ss_dssp EEEEESSCCSCCSSCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTHHHHHHTTCCCEEEECCSCCCCCCSHHH
T ss_pred EeeeecCCCCcccccccceeeEEEEEEEcCHHHHHHHHhCCCCccchhhHHHHHHHHHCCCeEEEEEeCCcccCCCCHHH
Confidence 9999988642 11 357899999999998876522 111111 11 2233344567999999999999999999
Q ss_pred HHHHHHH
Q 020113 223 YITGLRL 229 (331)
Q Consensus 223 ~~~a~~~ 229 (331)
|..++..
T Consensus 224 l~~a~~~ 230 (234)
T 2y6p_A 224 LKIVEEK 230 (234)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999765
No 28
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.91 E-value=6.7e-23 Score=178.16 Aligned_cols=219 Identities=18% Similarity=0.207 Sum_probs=152.3
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
|.|||||||.|+||+ +|+|+|++|+|||+|+++.+.++++++|+|++++ +.+.+++.+ ++..+....+
T Consensus 3 ~~aiIlA~G~g~R~~------~K~l~~~~gkpli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~----~~~~~~~~~~ 70 (262)
T 1vic_A 3 FTVIIPARFASSRLP------GKPLADIKGKPMIQHVFEKALQSGASRVIIATDN--ENVADVAKS----FGAEVCMTSV 70 (262)
T ss_dssp CEEEEECCCCCSSST------TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH----TTCEEEECCC
T ss_pred cEEEEEcCCCCCCCC------CCccccCCCeEHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh----cCCEEEECCc
Confidence 469999999999994 4999999999999999999999999999999874 456666654 3555533222
Q ss_pred CcccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEE---ecCC-----CCceEEEEcCC
Q 020113 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIM---VDEP-----SKYGVVVMEET 150 (331)
Q Consensus 81 ~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~---~~~~-----~~~~~v~~d~~ 150 (331)
..+.|++ ++..+...+.....+.+++++||. +...++..+++.+.+.++++++. +.++ ..+..+..+++
T Consensus 71 ~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (262)
T 1vic_A 71 NHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLTDKD 149 (262)
T ss_dssp SSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECCCHHHHTCTTSCEEEECTT
T ss_pred cccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecCCHHHhcCCCceEEEECCC
Confidence 3444554 455566666432223899999998 34567999999998877666554 3332 23444444666
Q ss_pred cCceeEeeecC-----------------CCCCCCeEEEEEEEEChhhHhhccc-CCCCcc-cchHH--HHH-hcCcEEEE
Q 020113 151 TGKVEKFVEKP-----------------KNFVGNKINAGIYLLNPSVLDRIEL-KPTSIE-KEVFP--EIA-AENKLFAM 208 (331)
Q Consensus 151 ~~~v~~~~ek~-----------------~~~~~~~~~~Giy~~~~~~l~~l~~-~~~~~~-~~~l~--~l~-~~~~i~~~ 208 (331)
|++..|.+++ +.+...+.++|+|+|+++.+..+.. .....+ .+++. .++ ...++.++
T Consensus 150 -g~v~~f~~~~~~~~r~~~~~~~~~~~~~~p~~~~~~~giy~~~~~~l~~~~~~~~~~~~~~e~~~~~~~l~~g~~v~~~ 228 (262)
T 1vic_A 150 -GYVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVE 228 (262)
T ss_dssp -SBEEEEESSCSSCCHHHHTTCSCGGGCCCCTTCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTTHHHHHTTCCEEEE
T ss_pred -CCEeeeecCCCCcCCccccccccccccccccceEEEEEEEEeeHHHHHHHHhCCCCchhhhhhHHHHHHHHCCCeEEEE
Confidence 8888777653 2334568999999999998876521 111111 11111 234 34479999
Q ss_pred EeC-ceEEecCCHHHHHHHHHHHHhh
Q 020113 209 VLP-GFWMDIGQPKDYITGLRLYLDF 233 (331)
Q Consensus 209 ~~~-~~~~~i~t~~d~~~a~~~~l~~ 233 (331)
+.+ ++|.||+||+||..++..+...
T Consensus 229 ~~~~~~~~dI~tpeDl~~a~~~l~~~ 254 (262)
T 1vic_A 229 LAKEVPAVGVDTAEDLEKVRAILAAN 254 (262)
T ss_dssp ECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHhc
Confidence 998 7899999999999998876543
No 29
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.91 E-value=7.6e-24 Score=180.83 Aligned_cols=205 Identities=22% Similarity=0.339 Sum_probs=134.5
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
|+|||||||.|+||+|+ ||+|+|++|+|||+|+++.+.++ +++++|++ +..+.+.+++.+ .++..+.++.+
T Consensus 19 ~~~iIlA~G~g~R~~~~----~K~l~~i~g~pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~---~~~~~~~~v~~ 89 (232)
T 2xme_A 19 MKAVILAAGLGTRLGGV----PKPLVRVGGCEIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLK---DKGFNYKIVRH 89 (232)
T ss_dssp EEEEEEECC------CC----CGGGCEETTEEHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHT---TSCCCEEEEEC
T ss_pred ceEEEECCcCcCcCCCC----CcEEeEECCEEHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHH---hcCCcEEEEEC
Confidence 47999999999999985 99999999999999999999999 99999998 666666666432 23444555554
Q ss_pred Ccc-cCChHHHHHHHhhccCCCCCcEEEEeCCeecccc-HHHHHHHHhhcCCceEEE-e----cCCCCceEEEEcCCcCc
Q 020113 81 TEP-LGTAGPLALARDKLIDDSGEPFFVLNSDVISEYP-LKQMIEFHRGRGGEASIM-V----DEPSKYGVVVMEETTGK 153 (331)
Q Consensus 81 ~~~-~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~~~-l~~~l~~~~~~~~~~~i~-~----~~~~~~~~v~~d~~~~~ 153 (331)
..+ .|++++++.+++.+.+ ++++++||++++.+ ++.+++. . . .++ . .++..++.+..+ + ++
T Consensus 90 ~~~~~g~~~~i~~a~~~~~~----~~lv~~~D~p~~~~~~~~l~~~----~-~-~~~~~~~~~~~~~~~~~v~~~-~-g~ 157 (232)
T 2xme_A 90 DRPEKGNGYSLLVAKNHVED----RFILTMGDHVYSQQFIEKAVRG----E-G-VIADREPRFVDIGEATKIRVE-D-GR 157 (232)
T ss_dssp SCGGGCHHHHHHTTGGGCCS----SEEEEETTEEECHHHHHHHTTC----C-E-EEEESSCSSSCTTTSCEEEEE-T-TE
T ss_pred CCCCCCcHHHHHHHHHHCCC----CEEEEcCCcccCHHHHHHHHhC----C-C-cEEEccccccCCCcceEEEEc-C-CE
Confidence 443 7999999999988852 89999999976543 3444432 1 1 222 1 234456666665 4 78
Q ss_pred eeEeeecCCCCCCCeEEEEEEEEChhhHhhcccCCCCcccchHHHHHhcCcEEEEEeC-ceEEecCCHHHHHHHHHH
Q 020113 154 VEKFVEKPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAAENKLFAMVLP-GFWMDIGQPKDYITGLRL 229 (331)
Q Consensus 154 v~~~~ek~~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~l~~l~~~~~i~~~~~~-~~~~~i~t~~d~~~a~~~ 229 (331)
+..+.+++. ..+++++|+|+++++++..+.......+.. ++.+++.+.+..+.++ ++|.+++||+||.+++..
T Consensus 158 v~~~~~~~~--~~~~~~~g~~~~~~~~~~~l~~~~~~g~~~-l~~ll~~~~v~~~~~~~~~~~dI~tpeDl~~a~~~ 231 (232)
T 2xme_A 158 VAKIGKDLR--EFDCVDTGFFVLDDSIFEHAEKLRDREEIP-LSEIVKLARLPVTYVDGELWMDVDTKEDVRRANRA 231 (232)
T ss_dssp EEEEETTCS--SCSEEEEEEEEECTTHHHHHGGGTTSSCCC-HHHHHHHHTCBEEECCSCCEEEEECC---------
T ss_pred EEEeecCCC--CcceEEEEEEEECHHHHHHHHHHHhcChhH-HHHHHHcCCEEEEEECCCCEEeCCCHHHHHHHHhh
Confidence 888888764 356889999999999988764322222222 3344444456666765 689999999999887653
No 30
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.90 E-value=4.5e-22 Score=171.20 Aligned_cols=215 Identities=20% Similarity=0.198 Sum_probs=149.4
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCC-CEEEEEeccChHHHHHHHHHhhhccCeEEEEee
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGV-TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQ 79 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi-~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~ 79 (331)
|.|||||+|.|+|| | ||+|+|++|+|||+|+++.+.++++ ++++|++++ +.+.+++.+ +++++....
T Consensus 3 ~~aiIlA~G~~~R~-~-----~K~l~~i~g~pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~----~~~~~~~~~ 70 (245)
T 1h7e_A 3 AVIVIPARYGSSRL-P-----GKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQA----FGGKAIMTR 70 (245)
T ss_dssp EEEEEECCSCCSSS-T-----TGGGCEETTEEHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHH----TTCEEEECC
T ss_pred eEEEEEcCCcCCCC-C-----CCcccccCCchHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHH----cCCeEEeCC
Confidence 36899999999999 5 8999999999999999999999996 999999975 566666665 355554433
Q ss_pred CCcccCChHHHHHHHhhccCCCCCcEEEEeCCee--ccccHHHHHHHHhhc-CCceEEE---e-----cCCCCceEEEEc
Q 020113 80 ETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVI--SEYPLKQMIEFHRGR-GGEASIM---V-----DEPSKYGVVVME 148 (331)
Q Consensus 80 ~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i--~~~~l~~~l~~~~~~-~~~~~i~---~-----~~~~~~~~v~~d 148 (331)
+....|++. +..++..+.. +.+++++||.. ....+.++++.+.+. ++++++. . .++.... +..+
T Consensus 71 ~~~~~g~~~-~~~~~~~~~~---~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 145 (245)
T 1h7e_A 71 NDHESGTDR-LVEVMHKVEA---DIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAAEPSTVK-VVVN 145 (245)
T ss_dssp SCCSSHHHH-HHHHHHHSCC---SEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEECHHHHTCTTSCE-EEEC
T ss_pred CccCCcHHH-HHHHHHhCCC---CEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecCCHHHhcCCCCcE-EEEC
Confidence 344556644 4455555532 28999999993 456799999999877 6666554 3 0122222 2225
Q ss_pred CCcCceeEeeecCCC-CC-----CCeEEEEEEEEChhhHhhcc-cCCCCcc-cchHHHH---HhcCcEEEEEeCceEEec
Q 020113 149 ETTGKVEKFVEKPKN-FV-----GNKINAGIYLLNPSVLDRIE-LKPTSIE-KEVFPEI---AAENKLFAMVLPGFWMDI 217 (331)
Q Consensus 149 ~~~~~v~~~~ek~~~-~~-----~~~~~~Giy~~~~~~l~~l~-~~~~~~~-~~~l~~l---~~~~~i~~~~~~~~~~~i 217 (331)
++ +++..+.+++.. .. ..+.++|+|+|+++.+..+. .....++ .+.++.+ ....++.+++.++.|.|+
T Consensus 146 ~~-g~~~~~~~~~~~~~r~~~~~~~~~~~g~y~~~~~~l~~~~~~~~~~~~~td~~~~~~~~~~g~~v~~~~~~~~~~dI 224 (245)
T 1h7e_A 146 TR-QDALYFSRSPIPYPRNAEKARYLKHVGIYAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEVAATGPGV 224 (245)
T ss_dssp TT-CBEEEEESSCSSCCTTGGGCCEEEEEEEEEEEHHHHHHGGGSCCCHHHHHHTCTTHHHHHTTCCEEEEECCCCCCCS
T ss_pred CC-CcEEEeecCCCCCCcccccCceeEEEEEEEcCHHHHHHHHhCCCCccccchhhHHHHHHHCCCeEEEEEeCCCCCCC
Confidence 55 788888776432 11 25789999999999876542 1111111 1233222 234579999999899999
Q ss_pred CCHHHHHHHHHHHHhh
Q 020113 218 GQPKDYITGLRLYLDF 233 (331)
Q Consensus 218 ~t~~d~~~a~~~~l~~ 233 (331)
+||+||..++..+..+
T Consensus 225 dtp~Dl~~a~~~l~~~ 240 (245)
T 1h7e_A 225 DTPACLEKVRALMAQE 240 (245)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999998776544
No 31
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.88 E-value=2e-21 Score=179.45 Aligned_cols=314 Identities=12% Similarity=0.106 Sum_probs=197.7
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeC-CcchHHHHHHHHHHc----C--CCEEEEEeccChHHHHHHHHHhhhccCe
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFA-NKPMILHQIEALKAV----G--VTEVVLAINYQPEVMLNFLKEFEKKLEI 73 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~-g~pli~~~l~~l~~~----g--i~~i~iv~~~~~~~i~~~~~~~~~~~~~ 73 (331)
|.+||||||.|+||+. ..||+|+|+. |+|+|+++++++.+. | +..+++.+.+..+.+++|+++ .+.+++
T Consensus 80 ~~vviLAGGlGTRLg~---~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~-~~~fG~ 155 (469)
T 2icy_A 80 LVVLKLNGGLGTTMGC---TGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEK-YTNSNV 155 (469)
T ss_dssp EEEEEEECCBSGGGTC---CSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGG-GTTSSS
T ss_pred ceEEEEcCCccccCCC---CCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHh-cccCCc
Confidence 4689999999999964 7899999998 999999999999987 5 677777777778999999987 455677
Q ss_pred EEEEeeC------------------------CcccCChHHHHHH-----HhhccCCCCCcEEEEeCCeeccccHHHHHHH
Q 020113 74 KITCSQE------------------------TEPLGTAGPLALA-----RDKLIDDSGEPFFVLNSDVISEYPLKQMIEF 124 (331)
Q Consensus 74 ~v~~~~~------------------------~~~~G~~~al~~~-----~~~~~~~~~~~~lv~~~D~i~~~~l~~~l~~ 124 (331)
++.+..| ..|.|+++.+... ++.+.....++++|.++|.+.......++.+
T Consensus 156 ~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ll~~ 235 (469)
T 2icy_A 156 DIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTILKH 235 (469)
T ss_dssp CEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHHHHHH
T ss_pred eEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHHHHHH
Confidence 7775433 2678999988654 3333322223999999999876544579999
Q ss_pred HhhcCCceEEE---ecCC-CCceEEEEcCCcCceeEeeecCCC--------CCCCeEEEEEEEEChhhHhhcccC-----
Q 020113 125 HRGRGGEASIM---VDEP-SKYGVVVMEETTGKVEKFVEKPKN--------FVGNKINAGIYLLNPSVLDRIELK----- 187 (331)
Q Consensus 125 ~~~~~~~~~i~---~~~~-~~~~~v~~d~~~~~v~~~~ek~~~--------~~~~~~~~Giy~~~~~~l~~l~~~----- 187 (331)
|.++++++++. ..++ ..+|++...+...++.++.|+|.. ..-.+.++|+|+|+.++++.+...
T Consensus 236 ~~~~~a~~t~~v~~k~~~~~~~Gvl~~~dg~~~vvE~~e~p~~~~~e~k~~~~~~~~N~g~y~~~~~~L~~i~~~~~~~l 315 (469)
T 2icy_A 236 LIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKKLVEADALKM 315 (469)
T ss_dssp HHHHTCSEEEEEEECCTTCCSSCEEEEETTEEEEECGGGSCGGGHHHHHSSSSCCEEEEEEEEEEHHHHHHHHHTTCCCC
T ss_pred HHHcCCCeeEEEEEeccCCCceeEEEEECCEEEEEEEeccChhhhhhhccccccceeeEEEEEEcHHHHHHHHhcccCCc
Confidence 99999998887 4455 478887754321346666676653 233688999999999998876221
Q ss_pred -------------CCCcccchHHHHHhcCcEEEEEe-CceEEecCCHHHHHHHHHHHHhhhccccCCccCCCceEecceE
Q 020113 188 -------------PTSIEKEVFPEIAAENKLFAMVL-PGFWMDIGQPKDYITGLRLYLDFLQKNSSSKLATGSNIIGNVL 253 (331)
Q Consensus 188 -------------~~~~~~~~l~~l~~~~~i~~~~~-~~~~~~i~t~~d~~~a~~~~l~~~~~~~~~~i~~~~~i~~~~~ 253 (331)
...+|..+...+....+..++.+ ...|..+.++.|++.+...+...........-...+-+.|-+.
T Consensus 316 p~~v~~K~id~~~~~klE~~~~D~~~~~~~~~~~~V~R~~F~PvKn~~dll~~~s~l~~~~~g~~~~~~~~~~~~~P~v~ 395 (469)
T 2icy_A 316 EIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKASSDLLLVQSDLYTLVDGFVTRNKARTNPSNPSIE 395 (469)
T ss_dssp CCBCCEEEETTEEEECCBCCGGGGGGGSTTCEEEECCGGGCCBCCSHHHHHHHHSTTEEEETTEEEECTTCCSSSCCEEE
T ss_pred hhhccceecCCCceEeehHhhHHHHHhcCCeEEEEechhHcCcCCCHHHHHHHHHHHHHHhcCcEEecCcccCCCCCeEE
Confidence 01222222222222234455544 4579999999999888765322111100000000122233333
Q ss_pred EcCCc-EECC----CcEECCCCCceEeCCEEcCCCEECCCcEEccceEECC----CcEECcccEEcCcEEccCeEE
Q 020113 254 VHEGA-KIGD----GCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGE----DVHVADEVYSNGAVVLPHKEI 320 (331)
Q Consensus 254 i~~~~-~i~~----~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~----~~~i~~~~~i~~~~v~~~~~i 320 (331)
+++.= .|.+ .-.|- +=.....-+|..+++.|.++++.+.++|-. ...|-+|+++.+.+|.++..|
T Consensus 396 l~~~~~~v~~f~~rf~~~p--~~~~~~~l~v~gdv~fg~~v~l~G~v~i~~~~~~~~~ip~g~~l~~~~~~~~~~~ 469 (469)
T 2icy_A 396 LGPEFKKVATFLSRFKSIP--SIVELDSLKVSGDVWFGSSIVLKGKVTVAAKSGVKLEIPDRAVVENKNINGPEDL 469 (469)
T ss_dssp ECGGGCSHHHHHHTBSSCC--BCTTEEEEEEESEEEECSSCEEEEEEEEECCTTCEEEECTTCEEESCEECCC---
T ss_pred cChhhhhHHHHHHhcCCCc--ccccCCeEEEEeeeEEcCCcEEEEEEEEEcCCCCeeecCCCCEeecceeeccCCC
Confidence 33210 0000 00011 111112334667777888888877566653 247999999998888776543
No 32
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.86 E-value=4.9e-21 Score=164.74 Aligned_cols=218 Identities=12% Similarity=0.114 Sum_probs=147.2
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcC-CCEEEEEeccChH-HHHHHHHHhhhccCeEEEEee
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPE-VMLNFLKEFEKKLEIKITCSQ 79 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~g-i~~i~iv~~~~~~-~i~~~~~~~~~~~~~~v~~~~ 79 (331)
.|||||||.|+||++ ..+||+|+|++|+|||+|+++.+.+++ +++|+|+++++.. .+.+.+..+.... .+.++.
T Consensus 5 ~aIIlAaG~g~Rm~~--~~~pK~l~~l~Gkpll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~~~~--~~~~~~ 80 (246)
T 3f1c_A 5 YAQILAGGKGTRMGN--VSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYISDD--RIVVIE 80 (246)
T ss_dssp EEEEECC-----C-C--SSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHCCCT--TEEEEE
T ss_pred EEEEECCccccccCC--CCCCCeEEEECCeeHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhCCCC--CEEEEC
Confidence 599999999999987 467999999999999999999999998 9999999987654 3455555532111 233332
Q ss_pred CCcccCChHHHHHHHhhccC----CCCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEE-ecCCCCceEEEEcCCcC
Q 020113 80 ETEPLGTAGPLALARDKLID----DSGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIM-VDEPSKYGVVVMEETTG 152 (331)
Q Consensus 80 ~~~~~G~~~al~~~~~~~~~----~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~-~~~~~~~~~v~~d~~~~ 152 (331)
.+.+..++++.+++.+.. ...+.++++.||. +....+.++++.+.+.++..+++ +.+ .++..+++ +
T Consensus 81 --~~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~i~~~~~~d----~i~~~~~~-~ 153 (246)
T 3f1c_A 81 --GGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAVDTVIEALD----TIVESSNH-E 153 (246)
T ss_dssp --CCSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEEEEEEECSS----CEEECSSS-S
T ss_pred --CCCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCEEEEEeccc----eEEEecCC-C
Confidence 234667899999998864 1123899999998 55667999999998877655555 443 34444444 5
Q ss_pred ceeEeeecCCCCCCCeEEEEEEEEChhhHhhc-ccCCC---CcccchHHHHHhcC-cEEEEEeCceEEecCCHHHHHHHH
Q 020113 153 KVEKFVEKPKNFVGNKINAGIYLLNPSVLDRI-ELKPT---SIEKEVFPEIAAEN-KLFAMVLPGFWMDIGQPKDYITGL 227 (331)
Q Consensus 153 ~v~~~~ek~~~~~~~~~~~Giy~~~~~~l~~l-~~~~~---~~~~~~l~~l~~~~-~i~~~~~~~~~~~i~t~~d~~~a~ 227 (331)
.+..+.+|+. .+..-..++|+.+.+... ..... ....|....+...| ++..++.+.+|.+|+||+||..++
T Consensus 154 ~v~~~~~r~~----l~~~qtpq~f~~~~L~~a~~~~~~~~~~~~TD~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae 229 (246)
T 3f1c_A 154 VITDIPVRDH----MYQGQTPQSFNMKKVFNHYQNLTPEKKQILTDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVAN 229 (246)
T ss_dssp BCCBCCCGGG----EEEEEEEEEEEHHHHHHHHHTSCHHHHHHCCCHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHH
T ss_pred eEEEecChHH----hhhhcCCceeEHHHHHHHHHHHHHcCCCccCcHHHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHH
Confidence 6666666643 122234578997765543 21101 11234555555555 588888888899999999999998
Q ss_pred HHHHhhh
Q 020113 228 RLYLDFL 234 (331)
Q Consensus 228 ~~~l~~~ 234 (331)
..+..+.
T Consensus 230 ~~l~~~~ 236 (246)
T 3f1c_A 230 AIIQERI 236 (246)
T ss_dssp HHHHHHC
T ss_pred HHHhccc
Confidence 8776554
No 33
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.86 E-value=1.1e-20 Score=160.74 Aligned_cols=199 Identities=11% Similarity=0.119 Sum_probs=138.4
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcC-CCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~g-i~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
.|||||||.|+||+ ||+|+|++|+|||+|+++.+.+++ +++|+|+++. +.+.+++.+ ++.++ +..+
T Consensus 6 ~aiIlA~G~g~R~~------~K~l~~i~gkpll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~~----~~~~~-~~~~ 72 (228)
T 1ezi_A 6 IAVILARQNSKGLP------LKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAKN----FGVEV-VLRP 72 (228)
T ss_dssp EEEEECCSSCSSST------TTTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHHH----TTCEE-EECC
T ss_pred EEEEecCCCCCCCC------CcccceeCCcCHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHHH----cCCEE-EeCc
Confidence 39999999999997 799999999999999999999998 7999999963 445556554 34555 2222
Q ss_pred C----cccCChHHHHHHHhhccCCCCCcEEEEeCCee--ccccHHHHHHHHhhcCCceEEE---ecC-CCCceEEEEcCC
Q 020113 81 T----EPLGTAGPLALARDKLIDDSGEPFFVLNSDVI--SEYPLKQMIEFHRGRGGEASIM---VDE-PSKYGVVVMEET 150 (331)
Q Consensus 81 ~----~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i--~~~~l~~~l~~~~~~~~~~~i~---~~~-~~~~~~v~~d~~ 150 (331)
. ...|+.++++.+++.+... .+.+++++||.. ....++.+++.+.+.++++++. ..+ |. +...++++
T Consensus 73 ~~~~~~~~g~~~sv~~~l~~~~~~-~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~ 149 (228)
T 1ezi_A 73 AELASDTASSISGVIHALETIGSN-SGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPL--KTLLQINN 149 (228)
T ss_dssp C------CHHHHHHHHHHHHHTCC-SEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEECSSCTT--SCEEECC-
T ss_pred hHHcCCCCChHHHHHHHHHHhCCC-CCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEecCCCcc--eeeEEcCC
Confidence 2 3456788999999988421 238999999983 4567999999887766666555 333 33 33333655
Q ss_pred cCceeEeeecC------CC-CCCCeEEEEEEEEChhhHhhcccCCCCcccchHHHHHhcCcEEEEEeC-ceEEecCCHHH
Q 020113 151 TGKVEKFVEKP------KN-FVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAAENKLFAMVLP-GFWMDIGQPKD 222 (331)
Q Consensus 151 ~~~v~~~~ek~------~~-~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~l~~l~~~~~i~~~~~~-~~~~~i~t~~d 222 (331)
|.+..+.++. +. ......++|+|++++..+..... + ...++..++.+ ..|.||+||+|
T Consensus 150 -g~~~~~~~~~~~~~~~~~~~~~~~~~~giy~~~~~~l~~~~~--------~-----~g~~v~~~~~~~~~~~dIdtpeD 215 (228)
T 1ezi_A 150 -GEYAPMRHLSDLEQPRQQLPQAFRPNGAIYINDTASLIANNC--------F-----FIAPTKLYIMSHQDSIDIDTELD 215 (228)
T ss_dssp --CEEESSCHHHHTCCGGGSCCEEEEEEEEEEEEHHHHHHHTS--------S-----CCSSCEEEECCTGGGCCCCSHHH
T ss_pred -CcEeeccccccccCCcccCchhheeeeEEEEEeHHHHhhCCc--------c-----cCCceEEEEeCcccccCCCCHHH
Confidence 7888886621 11 11235678999999876654210 0 03356677765 57999999999
Q ss_pred HHHHHHHH
Q 020113 223 YITGLRLY 230 (331)
Q Consensus 223 ~~~a~~~~ 230 (331)
|..+...+
T Consensus 216 l~~a~~~l 223 (228)
T 1ezi_A 216 LQQAENIL 223 (228)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987654
No 34
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.86 E-value=1.3e-20 Score=160.98 Aligned_cols=215 Identities=11% Similarity=0.122 Sum_probs=135.8
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcC-CCEEEEEeccCh-HHHHHHHHHhhhccCeEEEEe
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQP-EVMLNFLKEFEKKLEIKITCS 78 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~g-i~~i~iv~~~~~-~~i~~~~~~~~~~~~~~v~~~ 78 (331)
|.|||||||.|+||++ ..+||+|+|++|+|||+|+++.+.+++ +++|+|++++.. +.+++++.+++-.........
T Consensus 3 ~~~iIlA~G~g~R~~~--~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI--SNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKYLPLYKERIIIT 80 (236)
T ss_dssp EEEEEEEC-------------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHHHCGGGGGGEEEE
T ss_pred eEEEEeCCccccccCC--CCCCCeeeeeCCccHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHhccccccCceEEE
Confidence 4799999999999987 568999999999999999999999984 999999998876 567777665421111111111
Q ss_pred eCCcccCChHHHHHHHhhccC--C--CCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEE--ecCCCCceEEEEcCC
Q 020113 79 QETEPLGTAGPLALARDKLID--D--SGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIM--VDEPSKYGVVVMEET 150 (331)
Q Consensus 79 ~~~~~~G~~~al~~~~~~~~~--~--~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~--~~~~~~~~~v~~d~~ 150 (331)
....|..++++.++..+.. . ..+.+++++||+ +....+..+++.|.+.++ ..++ +.++ +..+++
T Consensus 81 --~~~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~-~~~~~~~~~~-----~~~~~~ 152 (236)
T 2vsh_A 81 --KGGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA-VDTVVEAVDT-----IVESTN 152 (236)
T ss_dssp --ECCSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE-EEEEEECCSC-----EEECSS
T ss_pred --CCCCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc-EEEEEecccc-----EEEeCC
Confidence 1234678899999888741 1 112789999999 445679999999887654 2222 3332 222344
Q ss_pred cC-ceeEeeecCCCCCCCeEEEEEEEEChhhHhhc-ccCCCCc---ccchHHHHHhcC-cEEEEEeCceEEecCCHHHHH
Q 020113 151 TG-KVEKFVEKPKNFVGNKINAGIYLLNPSVLDRI-ELKPTSI---EKEVFPEIAAEN-KLFAMVLPGFWMDIGQPKDYI 224 (331)
Q Consensus 151 ~~-~v~~~~ek~~~~~~~~~~~Giy~~~~~~l~~l-~~~~~~~---~~~~l~~l~~~~-~i~~~~~~~~~~~i~t~~d~~ 224 (331)
| ++..+.+++.. ......|+|+++.+..+ ....... ..+.++.+...+ ++..++.+++|.|++||+||.
T Consensus 153 -g~~~~~~~~~~~~----~~~~~p~~f~~~~l~~~~~~~~~~g~~~~~~~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~ 227 (236)
T 2vsh_A 153 -GQFITDIPNRAHL----YQGQTPQTFRCKDFMDLYGSLSDEEKEILTDACKIFVIKGKDVALAKGEYSNLKITTVTDLK 227 (236)
T ss_dssp -SSBCCBCCCGGGE----EEEEEEEEEEHHHHHHHHHTCCHHHHHHCCSHHHHHHHTTCCEEEEECCTTCCCCCSHHHHH
T ss_pred -CCeeeeecChHHh----eeecCCcEecHHHHHHHHHHHHhcCCCcCCCHHHHHHHcCCCEEEEECCccccCcCCHHHHH
Confidence 7 77777776431 11234789998876543 2211111 112234444444 688888888899999999999
Q ss_pred HHHHHH
Q 020113 225 TGLRLY 230 (331)
Q Consensus 225 ~a~~~~ 230 (331)
.++..+
T Consensus 228 ~a~~~~ 233 (236)
T 2vsh_A 228 IAKSMI 233 (236)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 887643
No 35
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.84 E-value=2.6e-20 Score=157.75 Aligned_cols=208 Identities=16% Similarity=0.178 Sum_probs=140.1
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcC-CCEEEEEeccChH-HHHHHHHHhhhccCeEEEEe
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPE-VMLNFLKEFEKKLEIKITCS 78 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~g-i~~i~iv~~~~~~-~i~~~~~~~~~~~~~~v~~~ 78 (331)
|.+||||||.|+||+. ..||+|+|++|+|||+|+++.+.+++ ++++++++++... .+.+++. ..+ +.++
T Consensus 3 ~~~vIlA~G~g~R~~~---~~~K~l~~~~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~----~~~--v~~~ 73 (223)
T 2xwl_A 3 TVAVVPAAGSGERLRA---GRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFG----GED--SVIV 73 (223)
T ss_dssp EEEEEECCCCCGGGTS---SSCGGGSEETTEEHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTC----BTT--EEEE
T ss_pred eEEEEECCccCcccCC---CCCCeeeEECCeEHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhc----cCC--eEEE
Confidence 4699999999999983 57999999999999999999999988 9999999987653 3444331 112 3333
Q ss_pred eCCcccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCcCc
Q 020113 79 QETEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETTGK 153 (331)
Q Consensus 79 ~~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~~~ 153 (331)
.. ..+.++++..++..+.. .+.+++++||. +....+..+++.+. ...++++. ..++.. + .+++ |+
T Consensus 74 ~~--~~~~~~~i~~al~~~~~--~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~~~~d~~~--~--~~~~-g~ 143 (223)
T 2xwl_A 74 SG--GVDRTESVALALEAAGD--AEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGLAPADTIK--A--VDAN-GA 143 (223)
T ss_dssp EC--CSSHHHHHHHHHTTCTT--CSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEECCSSCEE--E--ECTT-SB
T ss_pred cC--CCCHHHHHHHHHHhcCC--CCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEEecccceE--E--EcCC-Cc
Confidence 32 23568899999988831 22788999998 34457999999883 22344443 333322 2 3555 78
Q ss_pred eeEeeecCCCCCCCeEEEEEEEEChhhHhhc-ccCCCCcccchHHHHHhc-CcEEEEEeCceEEecCCHHHHHHHHHHHH
Q 020113 154 VEKFVEKPKNFVGNKINAGIYLLNPSVLDRI-ELKPTSIEKEVFPEIAAE-NKLFAMVLPGFWMDIGQPKDYITGLRLYL 231 (331)
Q Consensus 154 v~~~~ek~~~~~~~~~~~Giy~~~~~~l~~l-~~~~~~~~~~~l~~l~~~-~~i~~~~~~~~~~~i~t~~d~~~a~~~~l 231 (331)
+..+.|++.- ......|+|++..+..+ ......+..+....+... .++..++.++.|.|++||+||..+...+.
T Consensus 144 ~~~~~e~~~l----~~~~~p~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l~ 219 (223)
T 2xwl_A 144 VLGTPERAGL----RAVQTPQGFHADVLRRAYARATAGGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLA 219 (223)
T ss_dssp EEECCCGGGE----EEECSCEEEEHHHHHHHHTTCCSCCCCCHHHHHHTTTCCCEEEECCGGGCCCCSHHHHHHHHHHHH
T ss_pred EEeecChHHh----eeeeCCcccCHHHHHHHHHHhhCCCCccHHHHHHHcCCCEEEEECCcccccccCHHHHHHHHHHHh
Confidence 8888877531 11123578888766554 221111222334444443 35888888888999999999999976543
No 36
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.83 E-value=5.7e-20 Score=156.25 Aligned_cols=211 Identities=13% Similarity=0.195 Sum_probs=133.2
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHc-CCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAV-GVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~-gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
.|||||||.|+||+. ..||+|+|++|+|||+|+++.+.++ ++++|+|++++..+.+.+++. ..++.++.++.
T Consensus 6 ~aiIlAaG~g~R~~~---~~~K~l~~i~g~pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~---~~~~~~v~~~~- 78 (228)
T 2yc3_A 6 SVILLAGGQGKRMKM---SMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYE---ESIDVDLSFAI- 78 (228)
T ss_dssp EEEEECCCCC----------CGGGSEETTEEHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTT---TTSSSEEEEEC-
T ss_pred EEEEECCccccccCC---CCCccEeEECCEEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHH---HhCCCcEEEEC-
Confidence 699999999999973 5799999999999999999999998 799999999877655544432 23344555553
Q ss_pred CcccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEEecCCCCceEEEEcCCcCceeEee
Q 020113 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIMVDEPSKYGVVVMEETTGKVEKFV 158 (331)
Q Consensus 81 ~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~v~~d~~~~~v~~~~ 158 (331)
...|..++++.+++.+.... +.++++.||. +....++.+++.+.+.++ ..+....... +..++++ +.+..+.
T Consensus 79 -~~~~~~~sv~~al~~~~~~~-~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~-~i~~~~~~~~--~~~~~~~-~~v~~~~ 152 (228)
T 2yc3_A 79 -PGKERQDSVYSGLQEIDVNS-ELVCIHDSARPLVNTEDVEKVLKDGSAVGA-AVLGVPAKAT--IKEVNSD-SLVVKTL 152 (228)
T ss_dssp -CCSSHHHHHHHHHTTSCTTC-SEEEEEETTCTTCCHHHHHHHHHHHHHHSE-EEEEEECCSC--CCCBCTT-SCBCCCC
T ss_pred -CCCCHHHHHHHHHHhhccCC-CEEEEecCCCccCCHHHHHHHHHHHHhcCc-eEEEEeccce--EEEEcCC-CceEEec
Confidence 23578899999999886422 2788999997 445669999998876653 2222211111 1122433 4454433
Q ss_pred ecCCCCCCCeEEEEEEEEChhhHhh-cc---cCCCCcccchHHHHHhcC-cEEEEEeCceEEecCCHHHHHHHHHHH
Q 020113 159 EKPKNFVGNKINAGIYLLNPSVLDR-IE---LKPTSIEKEVFPEIAAEN-KLFAMVLPGFWMDIGQPKDYITGLRLY 230 (331)
Q Consensus 159 ek~~~~~~~~~~~Giy~~~~~~l~~-l~---~~~~~~~~~~l~~l~~~~-~i~~~~~~~~~~~i~t~~d~~~a~~~~ 230 (331)
+++. .......|+|+.+.+.. +. ..... ..+....+.+.+ ++..+..+..|.+++||+||..++..+
T Consensus 153 ~~~~----~~~~~~~~~f~~~~l~~~~~~~~~~~~~-~~~~~~~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l 224 (228)
T 2yc3_A 153 DRKT----LWEMQTPQVIKPELLKKGFELVKSEGLE-VTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERIL 224 (228)
T ss_dssp SCCC----CEEEEEEEEECHHHHHHHHHHHHHHTCC-CCSTTHHHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHH
T ss_pred Cccc----eEEEeCCcEEEHHHHHHHHHHHHhcCCC-cccHHHHHHHcCCceEEEeCCccccCcCCHHHHHHHHHHH
Confidence 3221 12333489999875543 21 11111 234455555544 465455455799999999999987654
No 37
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.83 E-value=2.6e-19 Score=152.42 Aligned_cols=210 Identities=15% Similarity=0.156 Sum_probs=127.4
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcC-CCEEEEEeccChHHHHHHHHHhhhccCeEEEEee
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQ 79 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~g-i~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~ 79 (331)
|.|||||||.|+||++ ..||+|+|++|+|||+|+++.+.+++ +++++|+++++.+.+.+ +.+.+. ..+.+.
T Consensus 7 ~~aiIlA~G~g~R~~~---~~~K~l~~~~gkpli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~~---~~i~~~- 78 (231)
T 1vgw_A 7 NIALIPAAGIGVRFGA---DKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTAFP---QVRVWK- 78 (231)
T ss_dssp EEEEEECC-------------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHHCT---TSEEEC-
T ss_pred eEEEEEcccccccCCC---CCCceEeEECCeEHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhcCC---CceEEE-
Confidence 4699999999999987 67999999999999999999999986 99999999876655555 544211 123333
Q ss_pred CCcccCChHHHHHHHhhccCC----CCCcEEEEeCCe-e-ccccHHHHHHHHhhcCCceEEE--ecCCCCceEEEEcCCc
Q 020113 80 ETEPLGTAGPLALARDKLIDD----SGEPFFVLNSDV-I-SEYPLKQMIEFHRGRGGEASIM--VDEPSKYGVVVMEETT 151 (331)
Q Consensus 80 ~~~~~G~~~al~~~~~~~~~~----~~~~~lv~~~D~-i-~~~~l~~~l~~~~~~~~~~~i~--~~~~~~~~~v~~d~~~ 151 (331)
....|+++++..++..+... ..+.+++++||. + ....+.++++.+.+.+..+.++ ..+. +...++
T Consensus 79 -~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~- 151 (231)
T 1vgw_A 79 -NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADT-----LKRAES- 151 (231)
T ss_dssp -CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTCEEEEEECCSC-----EEEESS-
T ss_pred -cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCeEEEEeecccc-----eEEeCC-
Confidence 34568899999998887420 122899999998 3 3456899999887654233223 2222 111233
Q ss_pred CceeEeeecCCCCCCCeEEEEEEEEChhhHhhc-ccCCCCcccchHHHHHh-cCcEEEEEeCceEEecCCHHHHHHHHHH
Q 020113 152 GKVEKFVEKPKNFVGNKINAGIYLLNPSVLDRI-ELKPTSIEKEVFPEIAA-ENKLFAMVLPGFWMDIGQPKDYITGLRL 229 (331)
Q Consensus 152 ~~v~~~~ek~~~~~~~~~~~Giy~~~~~~l~~l-~~~~~~~~~~~l~~l~~-~~~i~~~~~~~~~~~i~t~~d~~~a~~~ 229 (331)
|++....++ .......+.|+|+.+.+..+ .........+....+.. ..++..+..++.|.|++||+||..++..
T Consensus 152 g~i~~~~~~----~~~~~~~~p~~f~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~ 227 (231)
T 1vgw_A 152 GQISATVDR----SGLWQAQTPQLFQAGLLHRALAAENLGGITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLL 227 (231)
T ss_dssp SBEEEEECC----TTEEEEEEEEEEEHHHHHHHHHC----CCCSHHHHHHTTTCCCEEEECCTTCCCCCSHHHHHHHHHH
T ss_pred CceEecCCh----HHheeeeCCcEecHHHHHHHHHHHhhcCCCcHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHH
Confidence 555433322 11122335899998876554 21111111122222222 2357777777789999999999988654
No 38
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.82 E-value=5e-21 Score=163.23 Aligned_cols=191 Identities=17% Similarity=0.209 Sum_probs=131.9
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
|++||||||. +||++.+...||+|+|++|+|||+|+++.+..++. ++++++.. +.+++++ ++.+
T Consensus 3 ~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~pll~~~l~~l~~~~~-~ivvv~~~--~~i~~~~-------~~~~----- 66 (232)
T 2dpw_A 3 PSAIVLAGGK-EAWAERFGVGSKALVPYRGRPMVEWVLEALYAAGL-SPVYVGEN--PGLVPAP-------ALTL----- 66 (232)
T ss_dssp CEEEEECCCB-CSGGGTTTCSBGGGSEETTEETHHHHHHHHHHTTC-EEEEESCC--SSCSSCC-------SEEE-----
T ss_pred eeEEEECCCC-CccccccCCCCceeeEECCEEHHHHHHHHHHhcCC-EEEEEeCh--HHHhhhc-------CeEe-----
Confidence 5799999999 66665544579999999999999999999999988 88887653 2222222 3333
Q ss_pred CcccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEE-e--cCC-CCceEEEEcCCcCce
Q 020113 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIM-V--DEP-SKYGVVVMEETTGKV 154 (331)
Q Consensus 81 ~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~-~--~~~-~~~~~v~~d~~~~~v 154 (331)
..+.|++++++.+++.+. + ++++++||+ +....++++++ + +.++++++. . +++ ..|+.+ . .++
T Consensus 67 ~~~~g~~~~i~~a~~~~~-~---~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~~~~~~~~~~~~----~-~~v 135 (232)
T 2dpw_A 67 PDRGGLLENLEQALEHVE-G---RVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVPKEAVEARFPRT----K-RTY 135 (232)
T ss_dssp CCCSSHHHHHHHHHHTCC-S---EEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEEHHHHHHHCTTC----C-CCC
T ss_pred cCCCCHHHHHHHHHHHcC-C---CEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEeeccchhhhCCCc----c-eeE
Confidence 456799999999999885 2 899999999 55667899998 6 555555544 2 111 122211 1 346
Q ss_pred eEeeecCCCCCCCeEEEEEEEEChhhHhhccc-------CC---------------------CCcccchHHHHHh--cCc
Q 020113 155 EKFVEKPKNFVGNKINAGIYLLNPSVLDRIEL-------KP---------------------TSIEKEVFPEIAA--ENK 204 (331)
Q Consensus 155 ~~~~ek~~~~~~~~~~~Giy~~~~~~l~~l~~-------~~---------------------~~~~~~~l~~l~~--~~~ 204 (331)
..+.||| ..++|+|+|+++.+..+.. .. .....++++.+.. ..+
T Consensus 136 ~~~~ek~------~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~~~~~~~l~~~~~ge~~l~~~~~~~~~~~g~~ 209 (232)
T 2dpw_A 136 ARLREGT------FTGGNLLLLDKSLFRKALPLARRVVALRKRPLALARLVGWDVLLKLLLGRLSLAEVEARAQRILGVE 209 (232)
T ss_dssp EEETTEE------EEECSEEEEEHHHHTTTHHHHHHHHHTTTCHHHHHHHHCHHHHHHHHHTCCCHHHHHHHHHHHHSSC
T ss_pred EEEecCc------eeeeeEEEEcHHHHHHHHHHHHHHHHhccCHHHHHHHHCHHHHHHHHhccCCHHHHHHHHHHHhCcE
Confidence 6666665 4889999999998876521 10 1112244444432 246
Q ss_pred EEEEEe--CceEEecCCHHHHH
Q 020113 205 LFAMVL--PGFWMDIGQPKDYI 224 (331)
Q Consensus 205 i~~~~~--~~~~~~i~t~~d~~ 224 (331)
+..+.. .+.|.|+|||+||.
T Consensus 210 v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 210 ARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp EEEEECSCGGGTCCCCSHHHHC
T ss_pred EEEEecCChhhccCCCChhhcc
Confidence 777777 45699999999983
No 39
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.82 E-value=1.8e-19 Score=153.27 Aligned_cols=199 Identities=13% Similarity=0.081 Sum_probs=131.7
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcC-CCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~g-i~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
.|||||+|.|+||. +|+|+|++|+|||+|+++.+.+++ +++|+|+++ .+.+.+++.+ +++++.....
T Consensus 5 ~aiIlA~G~s~R~~------~K~l~~i~Gkpli~~~i~~~~~~~~~~~ivv~~~--~~~i~~~~~~----~g~~~~~~~~ 72 (229)
T 1qwj_A 5 AALVLARGGSKGIP------LKNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTD--HDEIENVAKQ----FGAQVHRRSS 72 (229)
T ss_dssp EEEEECCSCCSSSS------CTTTSEETTEEHHHHHHHHHHHHTCCSEEEEEES--CHHHHHHHHH----TTCEEEECCG
T ss_pred EEEEEcCCCCCCCC------CcccceECCEEHHHHHHHHHHhCCCcCEEEEECC--hHHHHHHHHH----cCCEEEeChh
Confidence 58999999999994 499999999999999999999998 699999884 4556666654 3555532221
Q ss_pred ---CcccCChHHHHHHHhhccCCCCCcEEEEeCCee--ccccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCcC
Q 020113 81 ---TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVI--SEYPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETTG 152 (331)
Q Consensus 81 ---~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i--~~~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~~ 152 (331)
....+..+++..++..+.. .+.+++++||.. ....+..+++.+.+.+++.++. ..+|..+.+ .| ...
T Consensus 73 ~~~~~~~~~~~~v~~al~~~~~--~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~~~~~p~~~~v--~~-~~~ 147 (229)
T 1qwj_A 73 ETSKDSSTSLDAIVEFLNYHNE--VDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRRHQFRWSEI--QK-GVR 147 (229)
T ss_dssp GGSSTTCCHHHHHHHHHTTCTT--CSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEECCCEECCC--CS-STT
T ss_pred hhcCCCCcHHHHHHHHHHhcCC--CCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEeeccChhHhhc--cc-ccc
Confidence 1122334788888888732 238999999993 4567999999998877665443 333443332 12 100
Q ss_pred ceeE--eeec----C--CCCCCCeEEEEEEEEChhhHhhcccCCCCcccchHHHHHhcCcEEEE-EeC-ceEEecCCHHH
Q 020113 153 KVEK--FVEK----P--KNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAAENKLFAM-VLP-GFWMDIGQPKD 222 (331)
Q Consensus 153 ~v~~--~~ek----~--~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~l~~l~~~~~i~~~-~~~-~~~~~i~t~~d 222 (331)
.+.. +.++ + ..+.....++|+|+|+++.+ + +. +..+....+ ..+ ++|.|||||+|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~n~giY~~~~~~l--~------------~~-~~~g~~~~~~~~~~~~~~dIdt~~D 212 (229)
T 1qwj_A 148 EVTEPLNLNPAKRPRRQDWDGELYENGSFYFAKRHLI--E------------MG-YLQGGKMAYYEMRAEHSVDIDVDID 212 (229)
T ss_dssp CCCCBSSSBTTBCCCTTTSCCEEEEEEEEEEEEHHHH--H------------TT-CSSCSSEEEEECCGGGCCCHHHHCS
T ss_pred ccccccccccccccCCCCCCceEEEeeEEEEEEHHHh--c------------cc-cccCCeEEEEECCcccccCCCCHHH
Confidence 1111 1111 1 11123467999999999887 1 01 112332244 554 68999999999
Q ss_pred HHHHHHHHHh
Q 020113 223 YITGLRLYLD 232 (331)
Q Consensus 223 ~~~a~~~~l~ 232 (331)
|..++..+..
T Consensus 213 l~~a~~~~~~ 222 (229)
T 1qwj_A 213 WPIAEQRVLR 222 (229)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999876543
No 40
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.81 E-value=3.1e-19 Score=148.12 Aligned_cols=183 Identities=22% Similarity=0.287 Sum_probs=118.2
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
|+|||||||.|+||++ .||+|+|++|+|||+|+++.+.++++++++|+++++.+.+.+++.+... +...+.++.
T Consensus 1 m~aiIlA~G~s~R~~~----~~K~l~~~~g~pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~~~-~~~~~~~~~- 74 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG----VEKPLIKLCGRCLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSAYK-DYKNIVVID- 74 (196)
T ss_dssp CEEEEEC----CGGGG----SCGGGCEETTEEHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHHTT-TTTEEEE---
T ss_pred CEEEEECCCCCCcCCC----CCccEEEECCEEHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhhcc-CCCCEEEEE-
Confidence 8999999999999987 6999999999999999999999999999999999888888888876211 111343333
Q ss_pred CcccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhh-----cCCceEEE-ecCCCCceEEEEcCCcC
Q 020113 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRG-----RGGEASIM-VDEPSKYGVVVMEETTG 152 (331)
Q Consensus 81 ~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~-----~~~~~~i~-~~~~~~~~~v~~d~~~~ 152 (331)
....|++++++.+++.+ .+ .+++++||+ +....+.++++.+.+ .+.+..+. +... . +
T Consensus 75 ~~~~g~~~si~~al~~~-~~---~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p~~-~----------~ 139 (196)
T 3rsb_A 75 TSGKGYIEDLNECIGYF-SE---PFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMIPKE-K----------Y 139 (196)
T ss_dssp ------CCCCCTTTTTC-SS---CEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEEEEETT-T----------C
T ss_pred CCCCCcHHHHHHHHHhC-CC---CEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEEEEEcc-c----------c
Confidence 45678888898888887 22 899999999 456679999999986 44444333 1111 0 0
Q ss_pred ceeEeeecCCCCCCCeEEEEEEEEChhhHhhcccCCCCcccchHHHHHhcCcEEEEEeCceEEecCCHHHHHHHHHHH
Q 020113 153 KVEKFVEKPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAAENKLFAMVLPGFWMDIGQPKDYITGLRLY 230 (331)
Q Consensus 153 ~v~~~~ek~~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~l~~l~~~~~i~~~~~~~~~~~i~t~~d~~~a~~~~ 230 (331)
. .|......+..+++..++++. .......+.+++...|||||+||..+...+
T Consensus 140 ~------~~~~~~~~~~~~~l~~l~~~~--------------------~~~~~~~~~~~~~~~DIDt~eDl~~ae~ll 191 (196)
T 3rsb_A 140 P------NPSIDFNGLVPADINVVSPKH--------------------GYQKEEIMVIDELIFNINTKDDLKLAEMLL 191 (196)
T ss_dssp C------SCSCCSSSEEEEEEEEECSCS--------------------SCCCEEEEECSSCCEECCSHHHHHHHHHCC
T ss_pred C------CCCeeeccccceeeEEecCCC--------------------CcceeEEEEecceEEecCCHHHHHHHHHHH
Confidence 0 111111124445666666543 001222344446678999999999886543
No 41
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.80 E-value=3.3e-18 Score=142.08 Aligned_cols=185 Identities=15% Similarity=0.222 Sum_probs=127.8
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (331)
.+||||||.|+||++ ||+|+|++|+|||+|+++.+..+++++++|++++..+.+.+++.+ +++++... +.
T Consensus 7 ~~iIlA~G~~~R~g~-----~K~l~~~~g~pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~----~~~~~~~~-~~ 76 (199)
T 2waw_A 7 TGVVLAAGYSRRLGT-----PKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAADEVLEKVEL----DGLDIVLV-DD 76 (199)
T ss_dssp EEEEEESSCCTTTTS-----CGGGCEETTEEHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCC----TTSEEEEC-CC
T ss_pred EEEEECCCCCCCCCC-----CEEeCEeCccCHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc----CCCEEEEC-CC
Confidence 689999999999964 899999999999999999999999999999998776666555443 35555432 34
Q ss_pred cccCChHHHHHHHhhccCCCCCcEEEEeCCee--ccccHHHHHHHHhhcCCceEEEecCCCCceEEEEcCCcCceeEeee
Q 020113 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDVI--SEYPLKQMIEFHRGRGGEASIMVDEPSKYGVVVMEETTGKVEKFVE 159 (331)
Q Consensus 82 ~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i--~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~v~~d~~~~~v~~~~e 159 (331)
...|++++++.+++.+... .+.+++++||+. ....+..+++. +.+++.++... + ++-
T Consensus 77 ~~~g~~~~i~~al~~~~~~-~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~----------~---g~~----- 135 (199)
T 2waw_A 77 AGLGCSSSLKSALTWVDPT-AEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY----------A---NGI----- 135 (199)
T ss_dssp CCTTCCCHHHHHHHTSCTT-CSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE----------T---TEE-----
T ss_pred cccCHHHHHHHHHHhhhcc-CCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec----------C---Ccc-----
Confidence 4568999999999988421 238999999994 35668888887 33333221111 1 110
Q ss_pred cCCCCCCCeEEEEEEEEChhhHhhcccCCCCcccchHHHHHhc-CcEEEEEe-CceEEecCCHHHHHHHHHHH
Q 020113 160 KPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAAE-NKLFAMVL-PGFWMDIGQPKDYITGLRLY 230 (331)
Q Consensus 160 k~~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~l~~l~~~-~~i~~~~~-~~~~~~i~t~~d~~~a~~~~ 230 (331)
..-++|+++.+..+.... ........+.+. .++..++. .+.|.|+|||+||..+...+
T Consensus 136 -----------~~P~~~~~~~l~~~~~~~--~~~~~~~~l~~~~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~ 195 (199)
T 2waw_A 136 -----------GHPFWVSRGVFGDLAELH--GDKGVWRLIESGRHGVRRIRVDADVPLDVDTWDDYERLLASV 195 (199)
T ss_dssp -----------EEEEEEEGGGHHHHHTCS--STTCHHHHHHSSSSCEEEEECSSCCCCCCSSHHHHHHHHHHH
T ss_pred -----------cCCEEEcHHHHHHHHhcC--CCHHHHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHH
Confidence 112578888877663211 112222223332 35777776 45899999999999887654
No 42
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.2e-18 Score=161.96 Aligned_cols=303 Identities=15% Similarity=0.179 Sum_probs=185.2
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeC-CcchHHHHHHHHHHc----CC--CEEEEEeccChHHHHHHHHHhhhccCeE
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFA-NKPMILHQIEALKAV----GV--TEVVLAINYQPEVMLNFLKEFEKKLEIK 74 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~-g~pli~~~l~~l~~~----gi--~~i~iv~~~~~~~i~~~~~~~~~~~~~~ 74 (331)
.+||||||.|+||+. ..||+|+|++ |+|||+|+++++... |. ..++++..+..+.+++++++ ...++..
T Consensus 94 avViLAGG~GTRmgs---~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~-~~~fg~~ 169 (488)
T 2i5k_A 94 AVLKLNGGLGTSMGC---VGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKK-YSANRIR 169 (488)
T ss_dssp EEEEECCCBSGGGTC---CSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGG-GCSSSCE
T ss_pred eEEEEcCCCcccCCC---CCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHh-ccccCce
Confidence 579999999999986 7899999998 999999999998877 53 24444444778889999987 3445677
Q ss_pred EEEeeCC------------------------cccCChHHHHH--H---HhhccCCCCCcEEEEeCCeecc-ccHHHHHHH
Q 020113 75 ITCSQET------------------------EPLGTAGPLAL--A---RDKLIDDSGEPFFVLNSDVISE-YPLKQMIEF 124 (331)
Q Consensus 75 v~~~~~~------------------------~~~G~~~al~~--~---~~~~~~~~~~~~lv~~~D~i~~-~~l~~~l~~ 124 (331)
+.+..|. .+.|+++++.. + ++.+.....++++|+++|.+.. .++. ++.+
T Consensus 170 i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~-~L~~ 248 (488)
T 2i5k_A 170 IRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLK-ILNH 248 (488)
T ss_dssp EEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHH-HHHH
T ss_pred EEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHH-HHHH
Confidence 7766555 67899998873 2 4555322223999999999765 4675 6688
Q ss_pred HhhcCCceEEE---ecCCC-CceEEEEcCCcCc--eeEeeecCCC--------CCCCeEEEEEEEEChhhHhhc-cc---
Q 020113 125 HRGRGGEASIM---VDEPS-KYGVVVMEETTGK--VEKFVEKPKN--------FVGNKINAGIYLLNPSVLDRI-EL--- 186 (331)
Q Consensus 125 ~~~~~~~~~i~---~~~~~-~~~~v~~d~~~~~--v~~~~ek~~~--------~~~~~~~~Giy~~~~~~l~~l-~~--- 186 (331)
|.++++++++. ..++. .||.+..++ |+ +.++.|.+.+ ..-...++|+|+|+.+.++.+ ..
T Consensus 249 ~~~~~a~~t~~v~~~~~p~~~yG~Iv~~d--G~~~iVE~~e~~~e~~~~~~~~~~~~~~Ntgi~~f~~~~L~~~l~~~~~ 326 (488)
T 2i5k_A 249 MIETGAEYIMELTDKTRADVKGGTLISYD--GQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINLKAVKRLIESSNL 326 (488)
T ss_dssp HHHSCCSEEEEEEECCGGGSSSCEEEEET--TEEEEECGGGSCTTSHHHHTCTTTCCEEEEEEEEEEHHHHHHHHHTTCC
T ss_pred HHhcCCcEEEEEEEecCCCCceeEEEEEC--CcEEEEEeccCCHHHHhhcccccccCEEEEEEEEEeHHHHHHHHhhccC
Confidence 88889888877 34554 489887653 44 4444444432 123588999999999887654 11
Q ss_pred CCC------------------Cccc---chHHHHHhcCcEEEEEe-CceEEecCCHHHHHHHHHHHHhhhccccCCcc-C
Q 020113 187 KPT------------------SIEK---EVFPEIAAENKLFAMVL-PGFWMDIGQPKDYITGLRLYLDFLQKNSSSKL-A 243 (331)
Q Consensus 187 ~~~------------------~~~~---~~l~~l~~~~~i~~~~~-~~~~~~i~t~~d~~~a~~~~l~~~~~~~~~~i-~ 243 (331)
... .+|. ++++.+ + ...++.+ ...|..+-+..+++.+...+ +.......+ .
T Consensus 327 ~lp~~v~~K~i~~~~~~~~~~qlE~~~~d~~~~~--~-~~~~~~V~R~~F~PvKn~~~ll~~~~~~---~~~~~g~~~~~ 400 (488)
T 2i5k_A 327 EMEIIPNQKTITRDGHEINVLQLETACGAAIRHF--D-GAHGVVVPRSRFLPVKTCSDLLLVKSDL---FRLEHGSLKLD 400 (488)
T ss_dssp CCCCBCCEECCCC-----CEECCBCCGGGGGGGS--S-SCEEEEECGGGCCBCCSHHHHHHHTSTT---EEEETTEEEEC
T ss_pred CCcceecCccccCCCCCCceEEeeehhhhHHhhc--c-CceEEEecccccccccCCccHHHHHHHH---HHHhcCcEeec
Confidence 000 0111 222222 1 2223333 22466777766554443321 111111111 0
Q ss_pred -CCceEecceEEcCCcEECCCcE----ECCCC-CceEe--CCEEcCCCEECCCcEEccceEEC----CCcEECcccEEcC
Q 020113 244 -TGSNIIGNVLVHEGAKIGDGCL----IGPDK-HACIS--SSIIGWHSTVGRWARVENMTILG----EDVHVADEVYSNG 311 (331)
Q Consensus 244 -~~~~i~~~~~i~~~~~i~~~~~----I~~~~-~~~i~--~s~i~~~~~ig~~~~i~~~~~i~----~~~~i~~~~~i~~ 311 (331)
..+.+.|-+..+++ ....-. +. . -+.++ .-+|..+++.|.++++.+.++|- +...|-+|+++.|
T Consensus 401 ~~~~e~~P~v~~~~~--~~~~~~~~~rf~--~~p~i~~~~~l~v~Gdv~fg~~v~l~G~v~i~a~~~~~~~ip~g~~l~n 476 (488)
T 2i5k_A 401 PSRFGPNPLIKLGSH--FKKVSGFNARIP--HIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILEN 476 (488)
T ss_dssp TTCCSSCCEEEECGG--GSSHHHHHHHCS--SCCBCTTEEEEEEESSEEECTTCEEEEEEEEECCTTCCEEECTTCEEEE
T ss_pred CCcCCCCCeEEECCc--ccchhhHHhhcC--CCccccccceEEEEeeeEEcCCcEEEEEEEEEcCCCCeEEeCCCCEEec
Confidence 01223444444432 101000 10 0 11221 23466777888888887756664 3468999999999
Q ss_pred cEEccCeEEc
Q 020113 312 AVVLPHKEIK 321 (331)
Q Consensus 312 ~~v~~~~~i~ 321 (331)
..|.++..|-
T Consensus 477 ~~~~~~~~~~ 486 (488)
T 2i5k_A 477 VVVTGNLQIL 486 (488)
T ss_dssp EEEEEEEEEE
T ss_pred ceeecccccc
Confidence 8888777653
No 43
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.79 E-value=7.7e-19 Score=145.75 Aligned_cols=182 Identities=15% Similarity=0.228 Sum_probs=122.9
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (331)
.+||||||.|+||+ .||+|+|++|+|||+|+++.+.++++++++|++++..+.+.+++.+ +++++... +.
T Consensus 7 ~~iIlA~G~~~R~g-----~~K~l~~~~g~pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~----~~~~~~~~-~~ 76 (197)
T 2wee_A 7 TGVVLAAGRSNRLG-----TPKQLLPYRDTTVLGATLDVARQAGFDQLILTLGGAASAVRAAMAL----DGTDVVVV-ED 76 (197)
T ss_dssp EEEEEECCCCTTTS-----SCGGGSEETTEEHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCC----TTSEEEEC-C-
T ss_pred EEEEECCCCcccCC-----CCeEcCeeCCccHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhcc----CCCEEEEC-CC
Confidence 68999999999995 4999999999999999999999999999999998776666555443 34555332 33
Q ss_pred cccCChHHHHHHHhhccCCCCCcEEEEeCCee--ccccHHHHHHHHhhcCCceEEEecCCCCceEEEEcCCcCceeEeee
Q 020113 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDVI--SEYPLKQMIEFHRGRGGEASIMVDEPSKYGVVVMEETTGKVEKFVE 159 (331)
Q Consensus 82 ~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i--~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~v~~d~~~~~v~~~~e 159 (331)
...|++++++.+++.+... .+.+++++||+. ....++++++. +.++.+++... + ++.
T Consensus 77 ~~~g~~~~i~~al~~~~~~-~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i~~~~~----------~---g~~----- 135 (197)
T 2wee_A 77 VERGCAASLRVALARVHPR-ATGIVLMLGDQPQVAPATLRRIIDV--GPATEIMVCRY----------A---DGV----- 135 (197)
T ss_dssp ---CCHHHHHHHHTTSCTT-EEEEEEEETTCTTCCHHHHHHHHHH--GGGSSEEEEEE----------T---TEE-----
T ss_pred cccCHHHHHHHHHHHhccc-CCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCEEEEec----------C---CCc-----
Confidence 4568999999999988421 128999999993 35568888887 33332221111 1 210
Q ss_pred cCCCCCCCeEEEEEEEEChhhHhhcccCCCCcccchHHHHHhc--CcEEEEEe-CceEEecCCHHHHHHHHH
Q 020113 160 KPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAAE--NKLFAMVL-PGFWMDIGQPKDYITGLR 228 (331)
Q Consensus 160 k~~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~l~~l~~~--~~i~~~~~-~~~~~~i~t~~d~~~a~~ 228 (331)
..-++|+++.+..+.... ....+ ..+++. .++..++. .+.|.|++||+||..+..
T Consensus 136 -----------~~P~~~~~~~l~~l~~~~--~~~~~-~~~l~~~~~~v~~v~~~~~~~~dIdtpeDl~~~~~ 193 (197)
T 2wee_A 136 -----------GHPFWFSRTVFGELARLH--GDKGV-WKLVHSGRHPVRELAVDGCVPLDVDTWDDYRRLLE 193 (197)
T ss_dssp -----------EEEEEEEGGGHHHHHTCC--STTHH-HHHHHCTTSCEEEEECSSCCCCCCSSHHHHHHHHT
T ss_pred -----------CCCEEECHHHHHHHHhCC--CChhH-HHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHH
Confidence 111478888877664211 12222 233333 35766766 458999999999988754
No 44
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.79 E-value=2.2e-18 Score=146.97 Aligned_cols=208 Identities=11% Similarity=0.085 Sum_probs=130.4
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcC-CCEEEEEeccChHHH-HHHHHHhhhccCeEEEEe
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPEVM-LNFLKEFEKKLEIKITCS 78 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~g-i~~i~iv~~~~~~~i-~~~~~~~~~~~~~~v~~~ 78 (331)
|.|||||||.|+||+. ..||+|+|++|+|||+|+++.+.+++ +++++|++++..... ++++. ++..+...
T Consensus 14 ~~aiILAaG~s~Rm~~---~~~K~l~~i~Gkpli~~~i~~l~~~~~~~~ivVv~~~~~~~~~~~~~~-----~~~~~~~~ 85 (234)
T 1vpa_A 14 NVAILLAAGKGERMSE---NVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVF-----HEKVLGIV 85 (234)
T ss_dssp EEEEEEECCCCGGGCC---SSCGGGCEETTEETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTCC-----CTTEEEEE
T ss_pred CeEEEEcCcchhhcCC---CCCceEEEECCeEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHhc-----cCCceEEe
Confidence 5799999999999984 56999999999999999999999998 899999998765432 32221 12222221
Q ss_pred eCCcccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEE-ecCCCCceEEEEcCCcCcee
Q 020113 79 QETEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIM-VDEPSKYGVVVMEETTGKVE 155 (331)
Q Consensus 79 ~~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~-~~~~~~~~~v~~d~~~~~v~ 155 (331)
....+..++++.++..+.....+.+++++||+ +....+..+++.+.+.++..++. +.+. +..++++ | +
T Consensus 86 --~gg~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~i~~~~~~~~----~~~~~~~-g-v- 156 (234)
T 1vpa_A 86 --EGGDTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETGAATLALKNSDA----LVRVEND-R-I- 156 (234)
T ss_dssp --ECCSSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHSEEEEEEECCSE----EEEEETT-E-E-
T ss_pred --CCCCcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCEEEEEecCCc----EEEECCC-C-c-
Confidence 11223667888888887431112678888998 34556899998887654322222 2221 2223444 5 5
Q ss_pred EeeecCCCCCCCeE-EEEEEEEChhhHhhcccCCCCcccchHHHHHhcC-cEEEEEeCceEEecCCHHHHHHHHHHHH
Q 020113 156 KFVEKPKNFVGNKI-NAGIYLLNPSVLDRIELKPTSIEKEVFPEIAAEN-KLFAMVLPGFWMDIGQPKDYITGLRLYL 231 (331)
Q Consensus 156 ~~~ek~~~~~~~~~-~~Giy~~~~~~l~~l~~~~~~~~~~~l~~l~~~~-~i~~~~~~~~~~~i~t~~d~~~a~~~~l 231 (331)
.+.++ ..+. .-..++|+...+..+...... ..+....+...+ ++..+..++.|.|||||+||..++..+.
T Consensus 157 ~~~~r-----~~~~~~~~p~~f~~~~l~~~~~~~~~-~~~~~~~~~~~g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~ 228 (234)
T 1vpa_A 157 EYIPR-----KGVYRILTPQAFSYEILKKAHENGGE-WADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELARIIAR 228 (234)
T ss_dssp EEECC-----TTEEEEEEEEEEEHHHHHHHHTTCCC-CSSSHHHHHTTTCCCEEEECCGGGCCCCSTTHHHHHHHHHH
T ss_pred ccCCh-----hHeeeecCCccccHHHHHHHHHhcCC-CCcHHHHHHHcCCcEEEEECCchhcCCCCHHHHHHHHHHHh
Confidence 55443 1222 223457888766554211111 122223333333 5666666677999999999999977543
No 45
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.76 E-value=1.2e-17 Score=142.70 Aligned_cols=213 Identities=15% Similarity=0.118 Sum_probs=132.3
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcC-CCEEEEEeccChHHHHHHHHHhhhccCeEEEEee
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQ 79 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~g-i~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~ 79 (331)
|.+||||||.|+||+. ..||+|+|++|+|||+|+++.+.+++ +++|+|++++..+.+.+ +..++. ..+.++.
T Consensus 8 ~~~iIlA~G~g~R~~~---~~~K~l~~i~g~pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~~---~~v~~~~ 80 (236)
T 1i52_A 8 VCAVVPAAGFGRRMQT---ECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPLANH---PQITVVD 80 (236)
T ss_dssp EEEEEEECCCCGGGCC---SSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGGGGC---TTEEEEE
T ss_pred eeEEEECCcCccccCC---CCCcceeeECCEEHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHhcCC---CCEEEEC
Confidence 4689999999999973 56999999999999999999999987 89999999875444443 332210 1233333
Q ss_pred CCcccCChHHHHHHHhhccCCCCCcEEEEeCCee--ccccHHHHHHHHhhcCCceEEEecCCCCceEEEEcCCcCceeEe
Q 020113 80 ETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVI--SEYPLKQMIEFHRGRGGEASIMVDEPSKYGVVVMEETTGKVEKF 157 (331)
Q Consensus 80 ~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i--~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~v~~d~~~~~v~~~ 157 (331)
. ..|..+++..++..+... +.+++++||.. ....+..+++.+.+.++.+.+++...... ...+++.+++...
T Consensus 81 ~--~~g~~~~i~~al~~~~~~--~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~ 154 (236)
T 1i52_A 81 G--GDERADSVLAGLKAAGDA--QWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTM--KRAEPGKNAIAHT 154 (236)
T ss_dssp C--CSSHHHHHHHHHHTSTTC--SEEEECCTTCTTCCHHHHHHHHGGGGTCSSCEEEEEECCSCE--EEECTTSSSEEEE
T ss_pred C--CCCHHHHHHHHHHhcCCC--CEEEEEcCccccCCHHHHHHHHHHHHhcCCeEEEEEeccccE--EEEcCCCCceeec
Confidence 2 247888999998888421 28999999983 34458889988766543332222111111 1123221344332
Q ss_pred eecCCCCCCCeEEEEEEEEChhhHhhc-cc---CCCCcccchHHHHHh-cCcEEEEEeCceEEecCCHHHHHHHHHHHH
Q 020113 158 VEKPKNFVGNKINAGIYLLNPSVLDRI-EL---KPTSIEKEVFPEIAA-ENKLFAMVLPGFWMDIGQPKDYITGLRLYL 231 (331)
Q Consensus 158 ~ek~~~~~~~~~~~Giy~~~~~~l~~l-~~---~~~~~~~~~l~~l~~-~~~i~~~~~~~~~~~i~t~~d~~~a~~~~l 231 (331)
.+ ...-+..-+.++|+.+.+..+ .. ....+ .+....+.. ..++..++.++.|.||+||+||..+...+.
T Consensus 155 ~~----~~~i~~~~~p~~f~~~~l~~~~~~~~~~g~~~-td~~~~~~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~ 228 (236)
T 1i52_A 155 VD----RNGLWHALTPQFFPRELLHDCLTRALNEGATI-TDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLT 228 (236)
T ss_dssp EC----CTTCEEEEEEEEEEHHHHHHHHHHHHHTTCCC-CSHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHC
T ss_pred cC----hHhheeeeCCceecHHHHHHHHHHHHhcCCCc-ccHHHHHHHcCCCEEEEecCccccccCCHHHHHHHHHHHH
Confidence 21 112233336678887655332 11 11111 112222222 245777777778999999999999977653
No 46
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.74 E-value=1e-16 Score=135.83 Aligned_cols=207 Identities=16% Similarity=0.165 Sum_probs=135.9
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcC-CCEEEEEeccCh-HHHHHHHHHhhhccCeEEEEee
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQP-EVMLNFLKEFEKKLEIKITCSQ 79 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~g-i~~i~iv~~~~~-~~i~~~~~~~~~~~~~~v~~~~ 79 (331)
.|||||||.|+||+. ..||+|++++|+|||+|+++.+.+++ +++|+++++++. +.+++.+.. ++. ++.
T Consensus 9 ~aIIlAaG~g~Rmg~---~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~-----~v~--~v~ 78 (231)
T 3q80_A 9 VAIVPAAGSGERLAV---GVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH-----RAM--IVA 78 (231)
T ss_dssp EEEEECCCCCTTTCS---SSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG-----GCE--EEE
T ss_pred EEEEECCCCCccCCC---CCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC-----CeE--EEc
Confidence 589999999999975 67999999999999999999999985 899999998765 444444432 233 232
Q ss_pred CCcccCChHHHHHHHhhccCC-CCCcEEEEeCCe--eccccHHHHHHHHhhcCCceEEE---ecCCCCceEEEEcCCcCc
Q 020113 80 ETEPLGTAGPLALARDKLIDD-SGEPFFVLNSDV--ISEYPLKQMIEFHRGRGGEASIM---VDEPSKYGVVVMEETTGK 153 (331)
Q Consensus 80 ~~~~~G~~~al~~~~~~~~~~-~~~~~lv~~~D~--i~~~~l~~~l~~~~~~~~~~~i~---~~~~~~~~~v~~d~~~~~ 153 (331)
...+..++++.++..+... ..+.++++.||. +....++.+++.+.+. .++.+. +.++-.+ .+++ +.
T Consensus 79 --gg~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~~-~~~~i~~~p~~dt~~~----~~~~-g~ 150 (231)
T 3q80_A 79 --GGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDG-YAAVVPVLPLSDTIKA----VDAN-GV 150 (231)
T ss_dssp --CCSSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHTT-CSEEEEEECCSSCEEE----ECTT-SB
T ss_pred --CCCchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhhc-CCeEEEEEeccCCEEE----EcCC-Cc
Confidence 1223468999999988642 123899999999 3455689999988762 233333 4443222 3555 67
Q ss_pred eeEeeecCCCCCCCeEEEEEEEEChhhHhhc-c---cC-CCCcccchHHHHHhcC-cEEEEEeCceEEecCCHHHHHHHH
Q 020113 154 VEKFVEKPKNFVGNKINAGIYLLNPSVLDRI-E---LK-PTSIEKEVFPEIAAEN-KLFAMVLPGFWMDIGQPKDYITGL 227 (331)
Q Consensus 154 v~~~~ek~~~~~~~~~~~Giy~~~~~~l~~l-~---~~-~~~~~~~~l~~l~~~~-~i~~~~~~~~~~~i~t~~d~~~a~ 227 (331)
+....++.. -..+.+ .|.|+.+.+... + .+ ......|....+...| ++..++-+..++.++||+|+..+.
T Consensus 151 v~~~~~r~~---l~~~qT-Pq~F~~~~L~~a~~~~~~~n~~~~~TD~~~~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae 226 (231)
T 3q80_A 151 VLGTPERAG---LRAVQT-PQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQ 226 (231)
T ss_dssp EEECCCGGG---EEEECS-CEEEEHHHHHHHHHHHTC-----CCSSSHHHHHHTTCCCEEEECCGGGCCCCSHHHHHHHH
T ss_pred EEEecchhh---eEEEcC-CcEEEHHHHHHHHHHHHhhcCCCCCCcHHHHHHHcCCcEEEEECCccccCcCCHHHHHHHH
Confidence 766654321 112233 489998877554 1 11 1111234445555444 476666555688999999999887
Q ss_pred HHH
Q 020113 228 RLY 230 (331)
Q Consensus 228 ~~~ 230 (331)
..+
T Consensus 227 ~~l 229 (231)
T 3q80_A 227 AIV 229 (231)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 47
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.74 E-value=4.7e-18 Score=145.15 Aligned_cols=197 Identities=15% Similarity=0.116 Sum_probs=119.7
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (331)
.|||||||.|+||++ . ||+|+|++|+|||+|+++. ..++++|+|++++. +.+ +.. .++ .++..
T Consensus 27 ~aiILAgG~s~Rm~~---~-~K~l~~i~gkpli~~~l~~--~~~~~~ivvv~~~~---~~~-~~~----~~v--~~~~~- 89 (236)
T 2px7_A 27 SVLIPAAGNGLRLGR---G-PKAFLQVGGRTLLEWTLAA--FRDAAEVLVALPPG---AEP-PKG----LGA--VFLEG- 89 (236)
T ss_dssp EEEEECCC----------C-CGGGCBCSSSBHHHHHHHH--TTTCSEEEEEECTT---CCC-CTT----CSC--EEEEC-
T ss_pred EEEEEcCCCCccCCC---C-CCeEEEECCEEHHHHHHHh--cCCCCeEEEEeCHH---HHH-hhc----CCc--EEEeC-
Confidence 399999999999985 4 9999999999999999999 67799999999851 111 211 233 33322
Q ss_pred cccCChHHHHHHHhhccCCCCCcEEEEeCCe-e-ccccHHHHHHHHhhcCCceEEE-ecCCCCceEEEEcCCcCceeEee
Q 020113 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDV-I-SEYPLKQMIEFHRGRGGEASIM-VDEPSKYGVVVMEETTGKVEKFV 158 (331)
Q Consensus 82 ~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~-i-~~~~l~~~l~~~~~~~~~~~i~-~~~~~~~~~v~~d~~~~~v~~~~ 158 (331)
..|...++..++..+.. +.+++++||+ + ....+..+++.+.+.++..++. ..++.. + .+ + |++..+.
T Consensus 90 -~~~~~~~i~~al~~~~~---~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~i~~~~~~~~~~--~--~~-~-G~v~~~~ 159 (236)
T 2px7_A 90 -GATRQASVARLLEAASL---PLVLVHDVARPFVSRGLVARVLEAAQRSGAAVPVLPVPDTLM--A--PE-G-EAYGRVV 159 (236)
T ss_dssp -CSSHHHHHHHHHHHCCS---SEEEECCTTCCCCCHHHHHHHHHHHHHHSEEEEEEECCSEEE--E--EC-S-SSCEEEE
T ss_pred -CCchHHHHHHHHHHcCC---CeEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEecCCcEE--E--ec-C-CeEEecC
Confidence 33678899999888852 2799999998 3 3456889998887654322222 222211 1 23 4 6776665
Q ss_pred ecCCCCCCCeEEEEEEEEChhhHhhc-cc---CCCCcccchHHHHHhc-CcEEEEEeCceEEecCCHHHHHHHHHHH
Q 020113 159 EKPKNFVGNKINAGIYLLNPSVLDRI-EL---KPTSIEKEVFPEIAAE-NKLFAMVLPGFWMDIGQPKDYITGLRLY 230 (331)
Q Consensus 159 ek~~~~~~~~~~~Giy~~~~~~l~~l-~~---~~~~~~~~~l~~l~~~-~~i~~~~~~~~~~~i~t~~d~~~a~~~~ 230 (331)
++.. -......++|+++.+..+ .. ....+ .+....+... .++..+..++.|.|++||+||..+...+
T Consensus 160 ~~~~----~~~~~~~~~f~~~~l~~~~~~~~~~g~~~-~d~~~ll~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 231 (236)
T 2px7_A 160 PREA----FRLVQTPQGFFTALLREAHAYARRKGLEA-SDDAQLVQALGYPVALVEGEATAFKITHPQDLVLAEALA 231 (236)
T ss_dssp CGGG----CEEECSCEEEEHHHHHHHHHHHHHHTCCC-SSHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHH
T ss_pred ChHh----hccccCCeEEcHHHHHHHHHHHHhcCCCc-hhHHHHHHHcCCcEEEEECCccccCCCCHHHHHHHHHHH
Confidence 5322 111113567888765432 11 01111 1222223222 3577788777899999999999987654
No 48
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.70 E-value=1.9e-17 Score=137.33 Aligned_cols=181 Identities=19% Similarity=0.240 Sum_probs=112.0
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
|.+||||||.|+||++ ||+|+|++|+|||+|+++.+..+ ++++++++..+.+.+++. .++ +. ..+
T Consensus 3 ~~~iIlAgG~g~Rmg~-----~K~l~~i~g~pll~~~l~~l~~~---~ivvv~~~~~~~~~~~~~-----~~~-~v-~~~ 67 (197)
T 3d5n_A 3 IGVIILAAGEGKRFGG-----DKLLAKIDNTPIIMRTIRIYGDL---EKIIIVGKYVNEMLPLLM-----DQI-VI-YNP 67 (197)
T ss_dssp EEEEEECSCCTTCCCS-----SGGGSBSSSSBHHHHHHHHTTTS---BCCEEECTTHHHHGGGCT-----TSC-EE-ECT
T ss_pred eEEEEECCcCcccCCC-----CeeeCEeCceEHHHHHHHHHHhC---CEEEEECCCHHHHHHHhc-----CCE-EE-ECC
Confidence 3699999999999975 89999999999999999999887 788888876544443332 244 32 223
Q ss_pred CcccCChHHHHHHHhhccCCCCCcEEEEeCCe-e-ccccHHHHHHHHhhcCCceEEEecCCCCceEEEEcCCcCceeEee
Q 020113 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV-I-SEYPLKQMIEFHRGRGGEASIMVDEPSKYGVVVMEETTGKVEKFV 158 (331)
Q Consensus 81 ~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~-i-~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~v~~d~~~~~v~~~~ 158 (331)
....|++++++.+++.+... +.+++++||+ + ....++.+++.+ +.+++.++... + ++
T Consensus 68 ~~~~G~~~si~~al~~~~~~--~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~~----------~---g~----- 126 (197)
T 3d5n_A 68 FWNEGISTSLKLGLRFFKDY--DAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPTH----------K---GE----- 126 (197)
T ss_dssp TGGGCHHHHHHHHHHHTTTS--SEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEEE----------T---TE-----
T ss_pred CCCCCHHHHHHHHHHhhccC--CcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEEe----------C---Cc-----
Confidence 33468999999999988642 2899999999 3 344588888876 43333222111 1 11
Q ss_pred ecCCCCCCCeEEEEEEEEChhhHhhcccCCCCcccchHHHHHhcC-cEEEEEeC--ceEEecCCHHHHHHHHHHH
Q 020113 159 EKPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAAEN-KLFAMVLP--GFWMDIGQPKDYITGLRLY 230 (331)
Q Consensus 159 ek~~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~l~~l~~~~-~i~~~~~~--~~~~~i~t~~d~~~a~~~~ 230 (331)
+..+ .+|+++.+..+..- ....++...+.+.+ ++..++.+ +.|.|++||+||..+...+
T Consensus 127 --~~~P---------~~~~~~~l~~l~~l--~g~~~~~~~l~~~~~~v~~v~~~~~~~~~dIdTpeDl~~~~~~~ 188 (197)
T 3d5n_A 127 --RGNP---------VLISKSLFNEIEKL--RGDVGARVILNKIKIEELCFIECSEGVLIDIDKKEDLMRLRDFH 188 (197)
T ss_dssp --ECSC---------EEEEHHHHHHHHHC--CTTCCTHHHHTTSCGGGEEEEECCGGGTCCTTTC----------
T ss_pred --ccCC---------EEECHHHHHHHHcc--CCCccHHHHHHhCccCeEEEEcCCCCcccCCCCHHHHHHHHHhh
Confidence 1112 37888877765311 12233333333322 45556654 4689999999998876543
No 49
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.69 E-value=5e-16 Score=144.94 Aligned_cols=180 Identities=20% Similarity=0.254 Sum_probs=134.0
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCcee---CCcchHHHHHHHHHH--------cC----CCEEEEEeccChHHHHHHHH
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDF---ANKPMILHQIEALKA--------VG----VTEVVLAINYQPEVMLNFLK 65 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi---~g~pli~~~l~~l~~--------~g----i~~i~iv~~~~~~~i~~~~~ 65 (331)
|.+||||||.|+||+. ..||+|+|+ .|+|+|+++++++.+ .| +..+++.+.+..+.++++++
T Consensus 103 vavViLAGG~GTRLg~---~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~~~f~ 179 (505)
T 1jv1_A 103 VAVLLLAGGQGTRLGV---AYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFT 179 (505)
T ss_dssp EEEEEECCCCCCTTSC---SSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHHHHHH
T ss_pred eEEEEEcCCccccCCC---CCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHHHHHH
Confidence 5689999999999975 789999999 799999999999877 36 78888888888889999998
Q ss_pred HhhhccCe---EEEEeeC---------------------CcccCChHHHHHHHh-----hccCCCCCcEEEEeCCee-cc
Q 020113 66 EFEKKLEI---KITCSQE---------------------TEPLGTAGPLALARD-----KLIDDSGEPFFVLNSDVI-SE 115 (331)
Q Consensus 66 ~~~~~~~~---~v~~~~~---------------------~~~~G~~~al~~~~~-----~~~~~~~~~~lv~~~D~i-~~ 115 (331)
+ .+.+++ .+.+..| ..|.|+++.+..... .+.....++|+|.++|.+ ..
T Consensus 180 ~-~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~L~~ 258 (505)
T 1jv1_A 180 K-HKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVK 258 (505)
T ss_dssp H-TGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBTTCC
T ss_pred h-hhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCccccc
Confidence 7 334454 2544332 357888887765432 332221239999999995 76
Q ss_pred ccHHHHHHHHhhcCCceEEE----ecCCCCceEEEEcCCcCceeEeeecCCC----------CCCCeEEEEEEEEChhhH
Q 020113 116 YPLKQMIEFHRGRGGEASIM----VDEPSKYGVVVMEETTGKVEKFVEKPKN----------FVGNKINAGIYLLNPSVL 181 (331)
Q Consensus 116 ~~l~~~l~~~~~~~~~~~i~----~~~~~~~~~v~~d~~~~~v~~~~ek~~~----------~~~~~~~~Giy~~~~~~l 181 (331)
.....++..|.++++++++. +.++..+|++..++...++.++.|+|.. ...++.++|+|+|+.+++
T Consensus 259 ~~d~~~lg~~~~~~~~~~~~v~~k~~~~e~~Gvl~~~dg~~~vvEy~E~p~~~~~~~~~~g~~~~~~~N~~~~~f~l~~L 338 (505)
T 1jv1_A 259 VADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANHFFTVPFL 338 (505)
T ss_dssp TTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEETTEEEEECGGGSCHHHHHCBCTTSSBSSCEEEEEEEEEEHHHH
T ss_pred cchHHHHHHHHHcCCCEEEEEEEccCCccCcceEEEECCeEEEEEEeeCCHHHhhhcccccccccceeeEEEEEecHHHH
Confidence 77778999999999998876 3456789988875421345666666542 123689999999999987
Q ss_pred hhc
Q 020113 182 DRI 184 (331)
Q Consensus 182 ~~l 184 (331)
+.+
T Consensus 339 ~~i 341 (505)
T 1jv1_A 339 RDV 341 (505)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 50
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.68 E-value=3.1e-18 Score=155.91 Aligned_cols=186 Identities=16% Similarity=0.182 Sum_probs=102.4
Q ss_pred cEEEEeCCeeccc--cHHHHHHHHhhcCCceEEE-ecCCCCceEEEEcCCc-CceeEeeecCCCCCC-CeEEEEEEEECh
Q 020113 104 PFFVLNSDVISEY--PLKQMIEFHRGRGGEASIM-VDEPSKYGVVVMEETT-GKVEKFVEKPKNFVG-NKINAGIYLLNP 178 (331)
Q Consensus 104 ~~lv~~~D~i~~~--~l~~~l~~~~~~~~~~~i~-~~~~~~~~~v~~d~~~-~~v~~~~ek~~~~~~-~~~~~Giy~~~~ 178 (331)
.=|+-.+|.++.. ++.++++.|. +++. .+++..+++..+++.. +++ .|.|||+.+.. .+.++|+|+|++
T Consensus 12 ~~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~~~~~~aGiyI~~~ 85 (374)
T 2iu8_A 12 SGLVPRGSHMSQSTYSLEQLADFLK-----VEFQGNGATLLSGVEEIEEAKTAHI-TFLDNEKYAKHLKSSEAGAIIISR 85 (374)
T ss_dssp ---------CCSCCEEHHHHHHHTT-----CEEESCTTCEECEECCTTTCCTTEE-EECCSSSTHHHHHTCCCSEEEEEH
T ss_pred cCcccCccccccCcCcHHHHHHhhC-----CEEECCCcceEEEEeccccCCCCeE-EEEeCchhhhhhhcCCcEEEEeCh
Confidence 3466788999886 8999999885 4666 5677788888887531 566 99999975322 467899999999
Q ss_pred hhHhhcccCCCCcccchHHHHHhcCcEEEEEeCceEEec--CCHHHHHHHHHHHHhhhccccCCccCCCceEecceEEcC
Q 020113 179 SVLDRIELKPTSIEKEVFPEIAAENKLFAMVLPGFWMDI--GQPKDYITGLRLYLDFLQKNSSSKLATGSNIIGNVLVHE 256 (331)
Q Consensus 179 ~~l~~l~~~~~~~~~~~l~~l~~~~~i~~~~~~~~~~~i--~t~~d~~~a~~~~l~~~~~~~~~~i~~~~~i~~~~~i~~ 256 (331)
++++.+.. + .+.+| ++.+++.++|....+|++. .++... +.......+.+.+++++.|+++++|++
T Consensus 86 ~~l~~~~~----~-~~~~p-l~~~~~~~a~~~~~~~~~~~i~~~~~~------i~~~~~i~~~a~Ig~~~~I~~~~~I~~ 153 (374)
T 2iu8_A 86 TQFQKYRD----L-NKNFL-ITSESPSLVFQKCLELFITPVDSGFPG------IHPTAVIHPTAIIEDHVCIEPYAVVCQ 153 (374)
T ss_dssp HHHHTSTT----S-CSCEE-EESSCHHHHHHHHHTTTSCCCCCSCCS------BCTTCEECTTCEECTTCEECTTCEECT
T ss_pred hHhhhccc----c-ccceE-EEeCCHHHHHHHHHHHhccccccccCc------cCCCCEECCCcEECCCCEECCCCEECC
Confidence 98753321 1 23333 3333332222222233332 111000 000000112334555555556666666
Q ss_pred CcEECCCcEECCCCCceE-eCCEEcCCCEECCCcEEccceEECCCcEECcccEE
Q 020113 257 GAKIGDGCLIGPDKHACI-SSSIIGWHSTVGRWARVENMTILGEDVHVADEVYS 309 (331)
Q Consensus 257 ~~~i~~~~~I~~~~~~~i-~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i 309 (331)
++.||++|.|+ .++.| .+++||++|.|++++.|..+++||++|.|+++++|
T Consensus 154 ~~~IG~~~~I~--~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I 205 (374)
T 2iu8_A 154 HAHVGSACHIG--SGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVI 205 (374)
T ss_dssp TCEECTTCEEC--TTCEECTTCEECTTCEECTTCEECSSEEECTTCEECTTCEE
T ss_pred CCEECCCCEEC--CCcEECCCcEECCceeeCCCcEEcccceECCCCEECCCCEE
Confidence 66666666666 55666 35666666666666666555667777776666665
No 51
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.67 E-value=1.2e-16 Score=132.88 Aligned_cols=107 Identities=20% Similarity=0.277 Sum_probs=81.5
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (331)
.+||||||.|+||+. .||+|+|++|+|||+|+++.+.. ++++|+|++++..+.+ .+ .++++......
T Consensus 8 ~~iILAgG~s~Rmg~----~~K~ll~i~G~pli~~~l~~l~~-~~~~ivvv~~~~~~~~----~~----~~~~~v~~~~~ 74 (201)
T 1e5k_A 8 TGVVLAGGKARRMGG----VDKGLLELNGKPLWQHVADALMT-QLSHVVVNANRHQEIY----QA----SGLKVIEDSLA 74 (201)
T ss_dssp EEEEECCCCCSSSCS----SCGGGSEETTEEHHHHHHHHHHH-HCSCEEEECSSSHHHH----HT----TSCCEECCCTT
T ss_pred eEEEEcCCCCCcCCC----CCCceeeECceeHHHHHHHHHHh-hCCEEEEEcCCcHHHH----hh----cCCeEEecCCC
Confidence 689999999999972 59999999999999999999985 4899999998765322 22 24444221112
Q ss_pred cccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHHH
Q 020113 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEF 124 (331)
Q Consensus 82 ~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~~ 124 (331)
...|++.++..+++.+..+ .+++++||+ +....+..+++.
T Consensus 75 ~~~G~~~si~~~l~~~~~~---~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 75 DYPGPLAGMLSVMQQEAGE---WFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp CCCSHHHHHHHHHHHCCSS---EEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCCCHHHHHHHHHHhCCCC---cEEEEeCCcCcCCHHHHHHHHhh
Confidence 2268999999999988542 899999999 344557888875
No 52
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.67 E-value=8.9e-17 Score=133.77 Aligned_cols=172 Identities=16% Similarity=0.142 Sum_probs=110.5
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (331)
.+||||||.|+||+ .||+|+|++|+|||+|+++.+..+ +++++|++++... +++ . ++++.. .+.
T Consensus 16 ~~iILA~G~g~Rmg-----~~K~ll~i~g~pll~~~l~~l~~~-~~~i~vv~~~~~~---~~~---~---~~~~v~-~~~ 79 (201)
T 2e8b_A 16 TCYVLAGGKSKRFG-----EDKLLYEIKGKKVIERVYETAKSV-FKEVYIVAKDREK---FSF---L---NAPVVL-DEF 79 (201)
T ss_dssp EEEEEEESSCCCCS-----TTHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEESCSGG---GGG---G---TCCEEE-CCC
T ss_pred eEEEECCCCCccCC-----CCcccceECceEHHHHHHHHHHHh-CCEEEEEeCcHHH---hhc---C---CceEEe-cCC
Confidence 69999999999997 489999999999999999999998 8999999987653 111 1 333322 233
Q ss_pred cccCChHHHHHHHhhccCCCCCcEEEEeCCeec--cccHHH-HHHHHhhcCCceEEEecCCCCceEEEEcCCcCceeEee
Q 020113 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS--EYPLKQ-MIEFHRGRGGEASIMVDEPSKYGVVVMEETTGKVEKFV 158 (331)
Q Consensus 82 ~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~--~~~l~~-~l~~~~~~~~~~~i~~~~~~~~~~v~~d~~~~~v~~~~ 158 (331)
...|+++++..+++.+..+ .+++++||+.+ ...++. ++ + .++++ ..+ + ++
T Consensus 80 ~~~g~~~~i~~al~~~~~~---~~lv~~~D~P~i~~~~i~~~l~----~--~~~~v-----------~~~-~-g~----- 132 (201)
T 2e8b_A 80 EESASIIGLYTALKHAKEE---NVFVLSGDLPLMKKETVLYVLE----N--FKEPV-----------SVA-K-TE----- 132 (201)
T ss_dssp SSCCHHHHHHHHHHHCSSS---EEEEEETTCTTCCHHHHHHHHH----T--CCSSE-----------EEE-E-SS-----
T ss_pred CCCCcHHHHHHHHHHcCCC---CEEEEeCCcCcCCHHHHHHHHh----c--CCEEE-----------Eec-C-Cc-----
Confidence 4579999999999988532 89999999943 334666 65 1 11111 011 1 21
Q ss_pred ecCCCCCCCeEEEEEEEEChhhHhhccc---CCCCcccchHHHHHhcCcEEEEEeC--ceEE--ecCCHHHHHHHHHH
Q 020113 159 EKPKNFVGNKINAGIYLLNPSVLDRIEL---KPTSIEKEVFPEIAAENKLFAMVLP--GFWM--DIGQPKDYITGLRL 229 (331)
Q Consensus 159 ek~~~~~~~~~~~Giy~~~~~~l~~l~~---~~~~~~~~~l~~l~~~~~i~~~~~~--~~~~--~i~t~~d~~~a~~~ 229 (331)
.....|+| |++++++.+.. .......++++. .++..+.++ +.|. |+|||+||.++...
T Consensus 133 --------~~p~~giy-~~~~~~~~l~~~~~~g~~~~~~~l~~----~~~~~~~~~~~~~~~~~dintpedl~~~~~~ 197 (201)
T 2e8b_A 133 --------KLHTLVGV-YSKKLLEKIEERIKKGDYRIWALLKD----VGYNEVEIPEELRYTLLNMNTKEDLKRILAI 197 (201)
T ss_dssp --------SEEEEEEE-EEGGGHHHHHHHHHTTCCCHHHHHHH----HCCEEEECCGGGGGGGCCSCCC---------
T ss_pred --------eeeEEEEE-eChhHHHHHHHHHHcCCchHHHHHHH----CCeEEeccccccchhhcCCCCHHHHHHHHHH
Confidence 24578999 99998776632 111111233332 245556653 4689 99999999887654
No 53
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.66 E-value=1.2e-15 Score=127.39 Aligned_cols=183 Identities=16% Similarity=0.175 Sum_probs=116.5
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
|.+||||||.|+||+. ||+|++++|+|||+|+++.+..+ +++|++++ .+.+..+ ...++.++.. ..
T Consensus 1 m~aiILAgG~s~Rmg~-----~K~ll~~~G~pli~~~~~~l~~~---~vvvv~~~-~~~~~~~----~~~~~~~~v~-d~ 66 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIGM-----EKTEVMLCGKKLIEWVLEKYSPF---QTVFVCRD-EKQAEKL----SSRYEAEFIW-DL 66 (208)
T ss_dssp CEEEEECCCCCTTTTS-----CGGGCEETTEEHHHHHHHHHTTS---EEEEECSS-HHHHHHH----HTTSCSCEEC-CT
T ss_pred CEEEEECCCchhhCCC-----CCcccEECCeeHHHHHHHHhcCC---CEEEEECC-HHHHHHH----HHhcCCeEEe-cC
Confidence 8999999999999973 89999999999999999999987 88888863 2333322 2223444432 22
Q ss_pred CcccCChHHHHHHHhhccCCCCCcEEEEeCCee--ccccHHHHHHHHhhcCCceEEEecCCCCceEEEEcCCcCceeEee
Q 020113 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVI--SEYPLKQMIEFHRGRGGEASIMVDEPSKYGVVVMEETTGKVEKFV 158 (331)
Q Consensus 81 ~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i--~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~v~~d~~~~~v~~~~ 158 (331)
....|...+++.++..+ .+ .+ +++||+. ....+..+++.+.+.+.++++.. + |+.
T Consensus 67 ~~~~G~~~si~~gl~~~-~~---~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~-------------~-g~~---- 123 (208)
T 3ngw_A 67 HKGVGSIAGIHAALRHF-GS---CV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALIPK-------------H-DYP---- 123 (208)
T ss_dssp TCCCSHHHHHHHHHHHH-SS---EE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEEEE-------------S-SSB----
T ss_pred CCCCChHHHHHHHHHHc-CC---CE-EEECCccCCCHHHHHHHHHHhhcCCCCEEEEc-------------C-CCe----
Confidence 33457789999999988 32 67 9999993 34558889888765444432212 1 210
Q ss_pred ecCCCCCCCeEEEEEEEEChhhHhhcccCCCCcccchHHHHHhcCcEEEEEeC---------ceEEecCCHHHHHHHHHH
Q 020113 159 EKPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAAENKLFAMVLP---------GFWMDIGQPKDYITGLRL 229 (331)
Q Consensus 159 ek~~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~l~~l~~~~~i~~~~~~---------~~~~~i~t~~d~~~a~~~ 229 (331)
.|- .-++++..+..+........+.+. .+++...+....++ +.|.++|||+||..+.+.
T Consensus 124 -~Pl----------~al~~~~~~~~l~~~l~~G~~~~~-~~l~~~~~~~v~~~~~~~~d~~~~~~~ninTpeDl~~~~~~ 191 (208)
T 3ngw_A 124 -EPL----------LAYYAESAADELERAILQGIRKIL-VPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEI 191 (208)
T ss_dssp -CTT----------EEEECGGGHHHHHHHHHTTCCCTH-HHHHTSCEEEEEGGGGTTTCTTCGGGCCCCSHHHHHHHHHH
T ss_pred -eEE----------EEEEcHHHHHHHHHHHHcCCCCHH-HHHHhCCEEEecHHHhcccCcccceEEecCCHHHHHHHHHH
Confidence 010 134566666544211111122232 33444445555543 358999999999888766
Q ss_pred HHh
Q 020113 230 YLD 232 (331)
Q Consensus 230 ~l~ 232 (331)
+..
T Consensus 192 ~~~ 194 (208)
T 3ngw_A 192 CSK 194 (208)
T ss_dssp HHH
T ss_pred hcc
Confidence 543
No 54
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.60 E-value=2.5e-15 Score=135.56 Aligned_cols=192 Identities=16% Similarity=0.151 Sum_probs=120.8
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHH-cCCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeC
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKA-VGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~-~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (331)
.+||||+|.|+||+. ..||+|+|++|+|||+|+++.+.+ .++++|+|+++ +.+.+++++. ++++ +
T Consensus 5 ~aIILAaG~ssRmg~---~~pK~ll~l~GkPLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~~------~v~~--v-- 70 (371)
T 1w55_A 5 SLIMLAAGNSTRFNT---KVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFTK------NYEF--I-- 70 (371)
T ss_dssp EEEEECCSCCTTTCS---SSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTCS------SSEE--E--
T ss_pred EEEEECCCCCccCCC---CCCcceEEECCeEHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHhC------CCEE--E--
Confidence 589999999999974 579999999999999999999998 57999999998 4443333221 1233 3
Q ss_pred CcccCChHHHHHHHhhccCCCCCcEEEEeCCee--ccccHHHHHHHHhhcCCceEEE-ecCCCCceEEEEcCCcCceeEe
Q 020113 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVI--SEYPLKQMIEFHRGRGGEASIM-VDEPSKYGVVVMEETTGKVEKF 157 (331)
Q Consensus 81 ~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~i--~~~~l~~~l~~~~~~~~~~~i~-~~~~~~~~~v~~d~~~~~v~~~ 157 (331)
....|..++++.+++.+.. +.+++++||.. ....++++++.+.+.++...+. +.+...+.....+. ..+...
T Consensus 71 ~~g~g~~~sv~~aL~~l~~---d~vlv~~~D~Pli~~~~i~~li~~~~~~~a~i~~~~~~d~vk~v~~t~~r--~~l~~~ 145 (371)
T 1w55_A 71 EGGDTRAESLKKALELIDS---EFVMVSDVARVLVSKNLFDRLIENLDKADCITPALKVADTTLFDNEALQR--EKIKLI 145 (371)
T ss_dssp ECCSSHHHHHHHHHTTCCS---SEEEEEETTCTTCCHHHHHHHHTTGGGCSEEEEEECCCSCEEETTEEECG--GGCCEE
T ss_pred eCCCChHHHHHHHHHhcCC---CeEEEEeCCcccCCHHHHHHHHHHHHhcCCEEEEEEeecCeeeeeeecCc--cceeec
Confidence 2234677899999988753 28999999993 3456889998876553221122 22221110000011 111111
Q ss_pred eecCCCCCCCeEEEEEEEEChhhHhhc-ccCCCCcccchHHHHHhc-CcEEEEEeCceEEecCCHHHHHHHH
Q 020113 158 VEKPKNFVGNKINAGIYLLNPSVLDRI-ELKPTSIEKEVFPEIAAE-NKLFAMVLPGFWMDIGQPKDYITGL 227 (331)
Q Consensus 158 ~ek~~~~~~~~~~~Giy~~~~~~l~~l-~~~~~~~~~~~l~~l~~~-~~i~~~~~~~~~~~i~t~~d~~~a~ 227 (331)
..-+.|+.+.+..+ .... . ..+....+.+. .++..++.++.|.|++||+||..++
T Consensus 146 -------------~~P~~f~~~~l~~~~~~~~-~-~td~~~ll~~~g~~V~~v~~~~~~~dIdTpeDL~~Ae 202 (371)
T 1w55_A 146 -------------QTPQISKTKLLKKALDQNL-E-FTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLD 202 (371)
T ss_dssp -------------CSCEEEEHHHHHHHTSSCC-C-CSSHHHHHHTTTCCEEEEECCGGGCCCCSGGGGGGSC
T ss_pred -------------CCcceecHHHHHHHHHhcc-c-ccCHHHHHHhCCCcEEEEECCccccCCCCHHHHHHHH
Confidence 11256777766543 2221 1 12222333333 3577777777899999999998886
No 55
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.49 E-value=2.2e-13 Score=126.42 Aligned_cols=177 Identities=17% Similarity=0.166 Sum_probs=122.9
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeC-CcchHHHHHHHHHHcC------CCEEEEEeccChHHHHHHHH-HhhhccCe
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFA-NKPMILHQIEALKAVG------VTEVVLAINYQPEVMLNFLK-EFEKKLEI 73 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~-g~pli~~~l~~l~~~g------i~~i~iv~~~~~~~i~~~~~-~~~~~~~~ 73 (331)
.+|+||||.|+||+. ..||+|+|++ |+|+|++.++++.+.+ +..+++.+.+..+.+++|++ + .+.+++
T Consensus 77 avViLAGGlGTRLg~---~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~-~~~fGl 152 (505)
T 2oeg_A 77 VVLKLNGGLGTGMGL---CDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKAR-YPWLYQ 152 (505)
T ss_dssp EEEEEECCCCGGGTC---CSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHH-CHHHHT
T ss_pred eEEEEcCCcccccCC---CCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhh-hhccCC
Confidence 589999999999994 7899999999 9999999999999875 45556666676788999998 5 122232
Q ss_pred ---EEE-E---------------e-------eCCcccCChHHHHHH-----HhhccCCCCCcEEEEeCCeecc-ccHHHH
Q 020113 74 ---KIT-C---------------S-------QETEPLGTAGPLALA-----RDKLIDDSGEPFFVLNSDVISE-YPLKQM 121 (331)
Q Consensus 74 ---~v~-~---------------~-------~~~~~~G~~~al~~~-----~~~~~~~~~~~~lv~~~D~i~~-~~l~~~ 121 (331)
.+. + + ....|.|+++.+... ++.+.....++++|.++|.+.. .++ .+
T Consensus 153 ~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~-~l 231 (505)
T 2oeg_A 153 VFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK-RV 231 (505)
T ss_dssp TCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH-HH
T ss_pred CccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH-HH
Confidence 121 2 1 122466999887644 3443322223999999999874 456 89
Q ss_pred HHHHhhcCCceEEE---ecCC-CCceEEEEc------CCcCc---------eeEeeecCCC--------CCCCeEEEEEE
Q 020113 122 IEFHRGRGGEASIM---VDEP-SKYGVVVME------ETTGK---------VEKFVEKPKN--------FVGNKINAGIY 174 (331)
Q Consensus 122 l~~~~~~~~~~~i~---~~~~-~~~~~v~~d------~~~~~---------v~~~~ek~~~--------~~~~~~~~Giy 174 (331)
+.+|.++++++++. ..++ ..+|++..+ .+ |+ +.++.|-|.+ ..-.+.++...
T Consensus 232 lg~~~~~~ad~~~~v~~k~~~d~~~Gvl~~~~~~~~~~d-g~~nvEyn~~~llEyse~p~e~~~~~~g~~~f~~~Ninn~ 310 (505)
T 2oeg_A 232 LAYMEKEKIDFLMEVCRRTESDKKGGHLARQTVYVKGKD-GQPDAEKRVLLLRESAQCPKADMESFQDINKYSFFNTNNL 310 (505)
T ss_dssp HHHHHHHTCSEEEEEEECCTTCCSSEEEEEEEEEECCSS-SCCCEEEEEEEEEEGGGSCGGGHHHHHCTTTTCEEEEEEE
T ss_pred HHHHHhcCCcEEEEEEEecCCccceeEEEEecccccccC-CccccccCceeEEEeccCChhhhhcccCccccCeeEEEEE
Confidence 99999999998877 3444 578888773 33 56 3333333332 11235789999
Q ss_pred EEChhhHhhc
Q 020113 175 LLNPSVLDRI 184 (331)
Q Consensus 175 ~~~~~~l~~l 184 (331)
+|+-+.++.+
T Consensus 311 ~~~l~~l~~~ 320 (505)
T 2oeg_A 311 WIRLPVLLET 320 (505)
T ss_dssp EEEHHHHHHH
T ss_pred EEEHHHHHHH
Confidence 9998877654
No 56
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.44 E-value=6.5e-14 Score=130.19 Aligned_cols=225 Identities=12% Similarity=0.154 Sum_probs=126.3
Q ss_pred cCeEEEEeeCCcccCChHHHHHHHhhccCCCCCcEEEEe----CCeeccccHHHHHHHHhhc--CC---------ceEEE
Q 020113 71 LEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLN----SDVISEYPLKQMIEFHRGR--GG---------EASIM 135 (331)
Q Consensus 71 ~~~~v~~~~~~~~~G~~~al~~~~~~~~~~~~~~~lv~~----~D~i~~~~l~~~l~~~~~~--~~---------~~~i~ 135 (331)
++..+++..+..+++++.+++.+-+.+. .++|+. +|.....++.+++..|.+. +. ..++-
T Consensus 111 ~g~~vt~~~~~~pL~~a~~i~~~d~~~~-----~t~V~~~~~kpd~~~~~~l~~l~~~h~~~~~g~~~~~~~ig~~~ti~ 185 (496)
T 3c8v_A 111 KGQHFVCDGKMIPLHDDEVITIKDSFLN-----KTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVD 185 (496)
T ss_dssp TTCEEEETTEEEECSSCCEEEEESCEEE-----SCEEESCCCCTTCTTEEEEESCEECTTCEEESCCEESCEECTTCEEE
T ss_pred cCCEEEEEecccchhHhhhHHhhhhcCC-----ceEEeccccCCCCccccchHHHHHHHHHhhcCCcccceEecccceee
Confidence 4567777777778888887443333321 237777 5777666666666666542 21 22322
Q ss_pred ---ecCC--CCceEEEEcCCcCceeEeeecCCCC--CCCeEEEEEEEEChhhHhhccc--CCCCcccchHHHHHhcCcEE
Q 020113 136 ---VDEP--SKYGVVVMEETTGKVEKFVEKPKNF--VGNKINAGIYLLNPSVLDRIEL--KPTSIEKEVFPEIAAENKLF 206 (331)
Q Consensus 136 ---~~~~--~~~~~v~~d~~~~~v~~~~ek~~~~--~~~~~~~Giy~~~~~~l~~l~~--~~~~~~~~~l~~l~~~~~i~ 206 (331)
+.++ ..++.+. . +++....++|... .++.....+|.|.+..++.+.. ..... +..+..++.
T Consensus 186 L~~l~d~li~~~~~~~---~-g~i~~~~~~pg~~~i~~~~~lnf~Y~f~~~~L~~~l~~~~~~n~-~g~~~Dll~----- 255 (496)
T 3c8v_A 186 LSTIHNSVVRYFSYVQ---T-GELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCP-TGVLMEFVE----- 255 (496)
T ss_dssp SCEEESCEECTTCEEE---S-SEEESCEECTTEEEEECTTSEEEEEECCHHHHTTTCBCCTTSCC-BSHHHHHHH-----
T ss_pred HHHHHHHHHHHHhhhc---C-CceEEeeecCCceecccccccceEEEcCHHHHHHHHhhccCccc-cceeeehhc-----
Confidence 4455 4565552 2 5666666666421 1222345699999988876521 11110 111111111
Q ss_pred EEEeCceEEecCCHHHHHHHHHHHH----hhhc----------cccCCccCCCceEecceEEcCCcEECCCcEECCCCCc
Q 020113 207 AMVLPGFWMDIGQPKDYITGLRLYL----DFLQ----------KNSSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHA 272 (331)
Q Consensus 207 ~~~~~~~~~~i~t~~d~~~a~~~~l----~~~~----------~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~ 272 (331)
..++++.+...... .... -.....|++++.|++++.| .+++||++|.|+ ++|
T Consensus 256 -----------~~~~d~~~i~~~~~~~~~~~I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I-~~v~IG~~~~I~--~~~ 321 (496)
T 3c8v_A 256 -----------VRQEDFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYL-DNAWMGKGSNAQ--ENC 321 (496)
T ss_dssp -----------TTTHHHHHHHHC--------CCTTCEECTTSEEESSCEECTTCEECTTCEE-EEEEECTTCEEC--TTC
T ss_pred -----------cchHHHHHHhhccccccCcccCCCcEECCCcEEeCCeEECCCCEECCCcEE-eceEecCCCEEC--CCc
Confidence 12344433211100 0000 0112334555555555555 356667777777 778
Q ss_pred eEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEcCc-----EEccCeEEccCcc
Q 020113 273 CISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGA-----VVLPHKEIKSSIV 325 (331)
Q Consensus 273 ~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~-----~v~~~~~i~~~~~ 325 (331)
+|.+|+||++|.||.++.|.+ ++||++|.||+++.|.++ .|+++++|+.++.
T Consensus 322 ~I~~~vIG~~~~Ig~~a~I~g-v~IGd~v~IG~~a~I~~~~~~~v~IG~~a~IGagsv 378 (496)
T 3c8v_A 322 YIINSRLERNCVTAHGGKIIN-AHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTI 378 (496)
T ss_dssp EEEEEEEEESCEECTTCEEES-EEEEETCEECTTCEEECCSSSCEEECTTCEECTTCE
T ss_pred eEeceEeCCCCEECCCcEEcC-ceECCCcEECCCCEEeCCCCcceEECCCCEECCCCE
Confidence 888888888888888888877 888888888888887544 7777777766543
No 57
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.44 E-value=2.5e-12 Score=115.79 Aligned_cols=178 Identities=21% Similarity=0.214 Sum_probs=130.1
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCcee---CCcchHHHHHHHHHH-------------cCCCEEEEEeccChHHHHHHHH
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDF---ANKPMILHQIEALKA-------------VGVTEVVLAINYQPEVMLNFLK 65 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi---~g~pli~~~l~~l~~-------------~gi~~i~iv~~~~~~~i~~~~~ 65 (331)
.+|+||||.|+||+. ..||+|+|+ .|+|+++++++.+.+ .++..+++.+.+..+.++++++
T Consensus 37 avvlLAGG~GTRLG~---~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t~~~f~ 113 (405)
T 3oc9_A 37 ALITPAGGQGSRLGF---EHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEINNYFK 113 (405)
T ss_dssp EEEEECCSBCTTTTC---CSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHHHHHHH
T ss_pred EEEEecCCCcccccC---CCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHHHHHHH
Confidence 478999999999976 789999999 899999999998864 4688888888888899999998
Q ss_pred HhhhccCe---EEEEee---------------------CCcccCChHHHHHH-----HhhccCCCCCcEEEEeCCe-ecc
Q 020113 66 EFEKKLEI---KITCSQ---------------------ETEPLGTAGPLALA-----RDKLIDDSGEPFFVLNSDV-ISE 115 (331)
Q Consensus 66 ~~~~~~~~---~v~~~~---------------------~~~~~G~~~al~~~-----~~~~~~~~~~~~lv~~~D~-i~~ 115 (331)
+ .+.++. .+.+.. ...|.|+++.+... ++.+....-+++++.+.|. +..
T Consensus 114 ~-~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN~L~~ 192 (405)
T 3oc9_A 114 E-HQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDNILCK 192 (405)
T ss_dssp H-TGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTBTTCC
T ss_pred h-CcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCCcccc
Confidence 7 233343 233322 23467777755542 2223222223888999999 777
Q ss_pred ccHHHHHHHHhhcCCceEEE---ecCC-CCceEEEE-cCCcCceeEeeecCCCC---------CCCeEEEEEEEEChhhH
Q 020113 116 YPLKQMIEFHRGRGGEASIM---VDEP-SKYGVVVM-EETTGKVEKFVEKPKNF---------VGNKINAGIYLLNPSVL 181 (331)
Q Consensus 116 ~~l~~~l~~~~~~~~~~~i~---~~~~-~~~~~v~~-d~~~~~v~~~~ek~~~~---------~~~~~~~Giy~~~~~~l 181 (331)
.....++..|.++++++++. ..++ ...|.+.. |.. .+|.++.|.|.+. .-+..+.++++|+.+++
T Consensus 193 ~~Dp~~lg~~~~~~~d~~~kvv~k~~~dek~Gvl~~~dg~-~~vvEysei~~e~e~~~~~g~l~fn~~Ni~~h~fs~~fL 271 (405)
T 3oc9_A 193 DVDPNMIGYMDLLQSEICIKIVKKGFKEEKVGVLVKEQER-IKVVEYTELTDELNKQLSNGEFIYNCGHISINGYSTSFL 271 (405)
T ss_dssp SSCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEETTE-EEEECGGGCCTTTTCBCTTSCBSSCEEEEEEEEEEHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEEEEECCCCCCccceEEEECCe-eEEEEEeeCCHHHhhcCCCCceeeccceeEeeecCHHHH
Confidence 78889999999999998777 3344 67887775 433 4678887766541 13467899999999998
Q ss_pred hhc
Q 020113 182 DRI 184 (331)
Q Consensus 182 ~~l 184 (331)
+.+
T Consensus 272 ~~i 274 (405)
T 3oc9_A 272 EKA 274 (405)
T ss_dssp HHH
T ss_pred HHh
Confidence 754
No 58
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.42 E-value=2.1e-12 Score=120.10 Aligned_cols=178 Identities=17% Similarity=0.220 Sum_probs=125.4
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeC---CcchHHHHHHHHHHc--------C------CCEEEEEeccChHHHHHH
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFA---NKPMILHQIEALKAV--------G------VTEVVLAINYQPEVMLNF 63 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~---g~pli~~~l~~l~~~--------g------i~~i~iv~~~~~~~i~~~ 63 (331)
|.+|+||||.|+||+. ..||+|+|++ |+|+|++.++++.+. | +..+++.+.+..+.++++
T Consensus 104 vavvlLaGG~GTRLg~---~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t~~~ 180 (486)
T 2yqc_A 104 VAVLLMAGGQGTRLGS---SAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNATESF 180 (486)
T ss_dssp EEEEEEEESBCGGGTC---SSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHHHHH
T ss_pred eEEEEEcCCccccCCC---CCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHHHHH
Confidence 4689999999999964 7899999999 999999999999986 6 888888888888999999
Q ss_pred HHHhhhccCeE---EEEee----------------------CCcccCChHHHHHHH-----hhccCCCCCcEEEEeCCee
Q 020113 64 LKEFEKKLEIK---ITCSQ----------------------ETEPLGTAGPLALAR-----DKLIDDSGEPFFVLNSDVI 113 (331)
Q Consensus 64 ~~~~~~~~~~~---v~~~~----------------------~~~~~G~~~al~~~~-----~~~~~~~~~~~lv~~~D~i 113 (331)
+++ .+.++.+ +.+.. ...|.|+++.+.... +.+....-+++.+.+.|.+
T Consensus 181 ~~~-~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~vDN~ 259 (486)
T 2yqc_A 181 FIE-NNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDNC 259 (486)
T ss_dssp HHH-TGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEETTBT
T ss_pred Hhh-ccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECCCCc
Confidence 987 2233331 22111 114678888664432 2232112227888899985
Q ss_pred cc--ccHHHHHHHHhhcCCceEEE-e--cCC-CCceEEEEc--CCcCceeEeeecCCC------C------CCCeEEEEE
Q 020113 114 SE--YPLKQMIEFHRGRGGEASIM-V--DEP-SKYGVVVME--ETTGKVEKFVEKPKN------F------VGNKINAGI 173 (331)
Q Consensus 114 ~~--~~l~~~l~~~~~~~~~~~i~-~--~~~-~~~~~v~~d--~~~~~v~~~~ek~~~------~------~~~~~~~Gi 173 (331)
.- .| ..++..|.++++++++. + .++ ...|.+... +...++.++.|+|.. + .....+++.
T Consensus 260 l~~~~D-p~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~~~~~~~~~~~~~~~Ni~~ 338 (486)
T 2yqc_A 260 LVKVAD-PIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRAANIVN 338 (486)
T ss_dssp TCCTTC-HHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEETTTTEEEEECGGGSCHHHHHCEETTEEEEESSCEEEEEE
T ss_pred eeeccC-HHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEEecCCCEEEEEEecCCHHHhhcccccccccccccceeEEE
Confidence 43 33 45788888889988776 2 233 677877754 211347788787642 1 236889999
Q ss_pred EEEChhhHhh
Q 020113 174 YLLNPSVLDR 183 (331)
Q Consensus 174 y~~~~~~l~~ 183 (331)
|+|+.++++.
T Consensus 339 ~~~~l~~L~~ 348 (486)
T 2yqc_A 339 HYYSVEFLNK 348 (486)
T ss_dssp EEEEHHHHHH
T ss_pred EEEeHHHHHH
Confidence 9999998876
No 59
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.42 E-value=7.9e-14 Score=119.10 Aligned_cols=116 Identities=21% Similarity=0.316 Sum_probs=57.4
Q ss_pred cEEEEEeCce----EEecCCHHHHHHHHHHHHhhhccc---------------cCCccCCCceEecceEEcCCcEE----
Q 020113 204 KLFAMVLPGF----WMDIGQPKDYITGLRLYLDFLQKN---------------SSSKLATGSNIIGNVLVHEGAKI---- 260 (331)
Q Consensus 204 ~i~~~~~~~~----~~~i~t~~d~~~a~~~~l~~~~~~---------------~~~~i~~~~~i~~~~~i~~~~~i---- 260 (331)
+++++...++ |.|+++ |+.+++.++...... ..+.+++++.|.+++.|+++|+|
T Consensus 40 ~~~~~~~~~~~~g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~~~v~Ig~~~~I~~~s 116 (240)
T 3r8y_A 40 QAFVNKKSGVLFGEWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNA 116 (240)
T ss_dssp EEEECSSEEEEEEEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEBSSCEECTTCEECTTC
T ss_pred eEEEcCCCeEEEccHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEECCCcEECCCCEECCCC
Confidence 3444444444 766666 778887776543211 11233344333333333333333
Q ss_pred --CCCcEECCCCCceEe-------CCEEcCCCEECCCcEEccc--------eEECCCcEECcccEE-cCcEEccCeEEcc
Q 020113 261 --GDGCLIGPDKHACIS-------SSIIGWHSTVGRWARVENM--------TILGEDVHVADEVYS-NGAVVLPHKEIKS 322 (331)
Q Consensus 261 --~~~~~I~~~~~~~i~-------~s~i~~~~~ig~~~~i~~~--------~~i~~~~~i~~~~~i-~~~~v~~~~~i~~ 322 (331)
+.+|+|| ++|.|. +++||++|.||+++.+.+. ++|+++|.||.+++| .++.|+++++|++
T Consensus 117 ~I~~~~~IG--~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~~ 194 (240)
T 3r8y_A 117 TINIGAVIG--EGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAA 194 (240)
T ss_dssp EECTTCEEC--TTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred EECCCCEEC--CCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECCCcEECCCCEECC
Confidence 2333333 334443 3444444444444444331 555677777777776 5566666666555
Q ss_pred Cc
Q 020113 323 SI 324 (331)
Q Consensus 323 ~~ 324 (331)
+.
T Consensus 195 gs 196 (240)
T 3r8y_A 195 GA 196 (240)
T ss_dssp TC
T ss_pred CC
Confidence 44
No 60
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.34 E-value=1.8e-11 Score=100.86 Aligned_cols=81 Identities=17% Similarity=0.243 Sum_probs=57.1
Q ss_pred ccC--CCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEccceEECCCcEECcccEE-cCcEEcc
Q 020113 241 KLA--TGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVENMTILGEDVHVADEVYS-NGAVVLP 316 (331)
Q Consensus 241 ~i~--~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i-~~~~v~~ 316 (331)
.++ +++.|.++++|+.++.||++|.|+ .++.|. ++.||++|.|++++.|.++++||++|.||.++.+ .++.|++
T Consensus 89 ~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~--~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~~~~Ig~ 166 (194)
T 3bfp_A 89 IVEENAGILIMPYVVINAKAKIEKGVILN--TSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLAD 166 (194)
T ss_dssp EECTTSCCEECTTCEECTTCEECTTCEEC--TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred eeCCCCCcEEcCCCEECCCCEECCCCEEC--CCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCEECCCCEECC
Confidence 455 666666666666666777777777 667775 6888888888888888888888888888888877 3455555
Q ss_pred CeEEccC
Q 020113 317 HKEIKSS 323 (331)
Q Consensus 317 ~~~i~~~ 323 (331)
+++|+++
T Consensus 167 ~~~Igag 173 (194)
T 3bfp_A 167 DSILGGG 173 (194)
T ss_dssp TCEECTT
T ss_pred CCEECCC
Confidence 5555443
No 61
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.33 E-value=1.9e-11 Score=102.93 Aligned_cols=83 Identities=16% Similarity=0.231 Sum_probs=63.7
Q ss_pred CccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEccceEECCCcEECcccEEc-CcEEccC
Q 020113 240 SKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVENMTILGEDVHVADEVYSN-GAVVLPH 317 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~~~ 317 (331)
..+++++.|+++++|++++.||++|.|+ .+++|. +++||++|.|++++.|.++++||++|.||.+++|. ++.|+++
T Consensus 112 v~IG~g~~I~~~~~i~~~~~IG~~~~I~--~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~~~~Ig~~ 189 (220)
T 4ea9_A 112 VRLGEGVAVMAGVAINADSWIGDLAIIN--TGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGAD 189 (220)
T ss_dssp CEECSSCEECTTCEECTTCEECTTCEEC--TTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTT
T ss_pred CEECCCCEEcCCCEECCCCEECCCCEEC--CCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEEcCCcEECCC
Confidence 4567777777777777788888888887 778885 68888888888888888888888888888888873 5666666
Q ss_pred eEEccCc
Q 020113 318 KEIKSSI 324 (331)
Q Consensus 318 ~~i~~~~ 324 (331)
++|+++.
T Consensus 190 ~~igags 196 (220)
T 4ea9_A 190 TIVGAGG 196 (220)
T ss_dssp CEECTTC
T ss_pred CEECCCC
Confidence 6665543
No 62
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.25 E-value=1.9e-11 Score=100.53 Aligned_cols=46 Identities=20% Similarity=0.232 Sum_probs=24.1
Q ss_pred CCEEcCCCEECCCcEEccceEECCCcEECcccEEc-CcEEccCeEEcc
Q 020113 276 SSIIGWHSTVGRWARVENMTILGEDVHVADEVYSN-GAVVLPHKEIKS 322 (331)
Q Consensus 276 ~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~~~~~i~~ 322 (331)
+++||++|.||.++.|.+ ++||++|.||.++.|. ++.|+++++|++
T Consensus 95 ~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~ 141 (191)
T 3ixc_A 95 DTVIGKFVTIGHSCILHA-CTLGNNAFVGMGSIVMDRAVMEEGSMLAA 141 (191)
T ss_dssp CEEECTTCEECTTCEECS-CEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred CeEECCCCEECCCCEEEC-CEECCCCEECCCCEEeCCeEECCCCEECC
Confidence 455555555555555555 5555555555555553 344444444443
No 63
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.25 E-value=1.6e-11 Score=102.22 Aligned_cols=83 Identities=11% Similarity=0.041 Sum_probs=61.9
Q ss_pred CccCCCceEecceEEcCCcEECCCcEECCCCCceEe----CCEEcCCCEECCCcEE------------------------
Q 020113 240 SKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS----SSIIGWHSTVGRWARV------------------------ 291 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~----~s~i~~~~~ig~~~~i------------------------ 291 (331)
..|++++.|+++++|+.++.||++|.|+ .++.|. +++||++|.||++|.|
T Consensus 53 v~IG~~~~I~~~~~I~~~v~IG~~~~I~--~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~~ 130 (205)
T 3vbi_A 53 ISIGNNVRIDDFCILSGKVTIGSYSHIA--AYTALYGGEVGIEMYDFANISSRTIVYAAIDDFSGNALMGPTIPNQYKNV 130 (205)
T ss_dssp EEECSSEEECTTCEEEEEEEECSSEEEC--TTCEEEEEEEEEEECTTCEECTTCEEESEECCCSSSSCCSTTSCGGGCCC
T ss_pred eEECCCCEECCCCEEccceEECCCCEEC--CCeEEEcCCccEEECCCCEECCCcEEEeCCCCcccccccCccccccccee
Confidence 4567777777777777778888888888 778882 4889999999999988
Q ss_pred -ccceEECCCcEECcccEEc-CcEEccCeEEccCc
Q 020113 292 -ENMTILGEDVHVADEVYSN-GAVVLPHKEIKSSI 324 (331)
Q Consensus 292 -~~~~~i~~~~~i~~~~~i~-~~~v~~~~~i~~~~ 324 (331)
.+.++||++|.||.++.|. ++.|+++++|+++.
T Consensus 131 ~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gs 165 (205)
T 3vbi_A 131 KTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMS 165 (205)
T ss_dssp EECCEEECTTCEECTTCEECSSCEECTTCEECTTC
T ss_pred ccCCEEECCCCEECCCCEEcCCCEECCCCEEcCCC
Confidence 3448888888888888774 55555555555443
No 64
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.24 E-value=2.3e-11 Score=98.37 Aligned_cols=64 Identities=17% Similarity=0.130 Sum_probs=38.6
Q ss_pred cEECCCcEECCCCCceEe-----CCEEcCCCEECCCcEEccceEECCCcEECcccEEc-CcEEccCeEEccCc
Q 020113 258 AKIGDGCLIGPDKHACIS-----SSIIGWHSTVGRWARVENMTILGEDVHVADEVYSN-GAVVLPHKEIKSSI 324 (331)
Q Consensus 258 ~~i~~~~~I~~~~~~~i~-----~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~~~~~i~~~~ 324 (331)
+.||++|.|+ +++.|. +++||++|.|++++.|.+ ++||++|.||.++.|. ++.|++++.|+++.
T Consensus 52 v~IG~~~~I~--~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s 121 (173)
T 1xhd_A 52 TIIGDRVNVQ--DQCTLHQSPQYPLILEDDVTVGHQVILHS-CHIKKDALIGMGSIILDGAEIGEGAFIGAGS 121 (173)
T ss_dssp EEECTTCEEC--TTCEEECCTTCCEEECTTCEECTTCEEES-CEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EEECCCCEEC--CCCEEEeCCCCCeEECCCCEECCCCEEeC-CEECCCCEEcCCCEEcCCCEECCCCEECCCC
Confidence 4455555555 556665 566666666666666666 6666666666666653 45555555555443
No 65
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.24 E-value=1.9e-11 Score=100.21 Aligned_cols=80 Identities=24% Similarity=0.267 Sum_probs=45.9
Q ss_pred cCCCceEecceEEcCCc---EECCCcEECCCCCceE------------eCCEEcCCCEECCCcEEccceEECCCcEECcc
Q 020113 242 LATGSNIIGNVLVHEGA---KIGDGCLIGPDKHACI------------SSSIIGWHSTVGRWARVENMTILGEDVHVADE 306 (331)
Q Consensus 242 i~~~~~i~~~~~i~~~~---~i~~~~~I~~~~~~~i------------~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~ 306 (331)
|++++.|+++++|..++ .||++|.|+ +++.| .+++||++|.||+++.|.+ ++||++|.||.+
T Consensus 36 IG~~~~I~~~~~i~~~~~~i~IG~~~~I~--~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~ 112 (187)
T 3r3r_A 36 LADDVGIWPLVVIRGDVNYVAIGARTNIQ--DGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHG-CTIGNRVLVGMG 112 (187)
T ss_dssp ECTTCEECTTCEEEEEEEEEEECTTCEEC--TTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEES-CEECSSEEECTT
T ss_pred ECCCCEECCCcEEEcCCccEEECCCCEEC--CCCEEecCCccccCCCCCCeEECCCCEECCCCEEeC-cEECCCCEECCC
Confidence 34444444444443322 555555555 55666 4566677777777776666 677777777776
Q ss_pred cEE-cCcEEccCeEEccCc
Q 020113 307 VYS-NGAVVLPHKEIKSSI 324 (331)
Q Consensus 307 ~~i-~~~~v~~~~~i~~~~ 324 (331)
++| .++.|+++++|+++.
T Consensus 113 ~~I~~~~~Ig~~~~Ig~~s 131 (187)
T 3r3r_A 113 SIVLDGAIIEDDVMIGAGS 131 (187)
T ss_dssp CEECTTCEECSSEEECTTC
T ss_pred CEECCCCEECCCCEECCCC
Confidence 666 345555555555443
No 66
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.24 E-value=1.5e-10 Score=94.84 Aligned_cols=82 Identities=12% Similarity=0.157 Sum_probs=55.8
Q ss_pred ccCCCceEecceEE--cCCcEECCCcEECCCCCceEeC---CEEcCCCEECCCcEE------------------ccceEE
Q 020113 241 KLATGSNIIGNVLV--HEGAKIGDGCLIGPDKHACISS---SIIGWHSTVGRWARV------------------ENMTIL 297 (331)
Q Consensus 241 ~i~~~~~i~~~~~i--~~~~~i~~~~~I~~~~~~~i~~---s~i~~~~~ig~~~~i------------------~~~~~i 297 (331)
.+++++.|.+++.+ |.++.||+++.|+ .++.|.+ ..||++|.||++|.| ...++|
T Consensus 58 ~ig~~~~I~~~~~~~~g~~~~IG~~~~i~--~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~I 135 (188)
T 3srt_A 58 SVGKQINVEQNIRCDYGYNIHVGENFFAN--YDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKI 135 (188)
T ss_dssp BCCSCEEECSCEEESSSTTEEECTTEEEC--TTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEE
T ss_pred hcCCCCEEcCCEEEEeCCCeEECCccccc--CceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEE
Confidence 57777888777776 4577788888777 6677753 267888888888777 233777
Q ss_pred CCCcEECcccEEc-CcEEccCeEEccCc
Q 020113 298 GEDVHVADEVYSN-GAVVLPHKEIKSSI 324 (331)
Q Consensus 298 ~~~~~i~~~~~i~-~~~v~~~~~i~~~~ 324 (331)
|++|.||.+++|. ++.|+++++|+++.
T Consensus 136 G~~v~IG~~~~I~~gv~IG~~~vIgags 163 (188)
T 3srt_A 136 GDNVWIGGGVIITPGITIGDNVVIGAGS 163 (188)
T ss_dssp CSSCEECTTCEECTTCEECSSEEECTTC
T ss_pred CCCcEEcCCCEECCCcEECCCCEECCCC
Confidence 7777777777763 55555555555443
No 67
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.23 E-value=9.6e-11 Score=105.01 Aligned_cols=66 Identities=20% Similarity=0.318 Sum_probs=36.8
Q ss_pred cCCCceEecceEEcCCcEECCCcEECCCCCceE-eCCEEcCCCEECCCcEEccceEECCCcEECcccEE
Q 020113 242 LATGSNIIGNVLVHEGAKIGDGCLIGPDKHACI-SSSIIGWHSTVGRWARVENMTILGEDVHVADEVYS 309 (331)
Q Consensus 242 i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i-~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i 309 (331)
+++++.|+++++|++++.||++|.|+ .++.| .++.||++|.|+++++|.++++||++|.|++++.|
T Consensus 112 ig~~~~I~~~~~I~~~v~IG~~~~I~--~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I 178 (341)
T 3eh0_A 112 LGNNVSIGANAVIESGVELGDNVIIG--AGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVV 178 (341)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEEC--TTCEECTTCEECTTCEECSSCEECTTCEECSSCEECTTCEE
T ss_pred ECCCCEECCCcEECCCcEECCCcEEC--CCcEECCCCEECCCcEECCCcEECCCCEECCccEEcCCcEE
Confidence 44444444555555555555555555 44555 35556666666666666444666666666666655
No 68
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.21 E-value=2e-10 Score=94.94 Aligned_cols=80 Identities=13% Similarity=0.082 Sum_probs=46.9
Q ss_pred ccCCCceEecceEE--cCCcEECCCcEECCCCCceEeC---CEEcCCCEECCCcEEc------------------cceEE
Q 020113 241 KLATGSNIIGNVLV--HEGAKIGDGCLIGPDKHACISS---SIIGWHSTVGRWARVE------------------NMTIL 297 (331)
Q Consensus 241 ~i~~~~~i~~~~~i--~~~~~i~~~~~I~~~~~~~i~~---s~i~~~~~ig~~~~i~------------------~~~~i 297 (331)
.+++++.|.+++.+ +.++.||++|.|+ .+++|.+ .+||++|.||++|.|. ..++|
T Consensus 56 ~~g~~~~i~~~~~~~~g~~~~IG~~~~I~--~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~I 133 (199)
T 3ftt_A 56 TTTDNVSISIPFDTDYGWNVKLGKNVYVN--TNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHI 133 (199)
T ss_dssp SCCSSEEECSSEEESSSTTEEECSSEEEC--TTEEEECSSCEEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEE
T ss_pred hcCCCeEEeCCEEEEecCCcEECCCeEEC--CCeEEecCCEEEECCCCEECCCCEEecCCCcCccccccccceecCCeEE
Confidence 35666777666666 5666777777776 5566642 4677777777777662 22456
Q ss_pred CCCcEECcccEEc-CcEEccCeEEcc
Q 020113 298 GEDVHVADEVYSN-GAVVLPHKEIKS 322 (331)
Q Consensus 298 ~~~~~i~~~~~i~-~~~v~~~~~i~~ 322 (331)
|++|.||.++.|. ++.|+++++|++
T Consensus 134 G~~v~IG~~~~I~~gv~IG~~~vIga 159 (199)
T 3ftt_A 134 GSNTWFGGHVAVLPGVTIGEGSVIGA 159 (199)
T ss_dssp CSSEEECTTCEECTTCEECTTCEECT
T ss_pred cCCcEEcCCCEECCCCEECCCCEECC
Confidence 6666666655552 444444444443
No 69
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.21 E-value=5.7e-11 Score=101.28 Aligned_cols=89 Identities=20% Similarity=0.299 Sum_probs=58.9
Q ss_pred cCCccCCCceEecceEE------cCCcEECCCcEECCCCCceEe-CCEEcCCCEECCC--------cEEccceEECCCcE
Q 020113 238 SSSKLATGSNIIGNVLV------HEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRW--------ARVENMTILGEDVH 302 (331)
Q Consensus 238 ~~~~i~~~~~i~~~~~i------~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~--------~~i~~~~~i~~~~~ 302 (331)
.+..|++++.|+++++| |++|.|+.+|+|+ .+++|. +|.|+++|.+... +.|+++|.||.+++
T Consensus 102 ~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~~~~I~--~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~ 179 (240)
T 3r8y_A 102 DHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLG--GRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVV 179 (240)
T ss_dssp SSCEECTTCEECTTCEECTTCEECTTCEECTTCEEC--TTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCE
T ss_pred CCcEECCCCEECCCCEECCCCEECCCCEECCCCEEC--CCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCE
Confidence 34445555555444444 4444444444444 567774 6888888888654 77877788888888
Q ss_pred ECcccEE-cCcEEccCeEEccCccCCc
Q 020113 303 VADEVYS-NGAVVLPHKEIKSSIVNPE 328 (331)
Q Consensus 303 i~~~~~i-~~~~v~~~~~i~~~~~~~~ 328 (331)
|.+++.| .+++|++++++..++...+
T Consensus 180 I~~~~~Ig~~~~I~~gsvV~~~vp~~~ 206 (240)
T 3r8y_A 180 VLEGVTVGKGAVVAAGAVVTEDVPPYT 206 (240)
T ss_dssp ECTTCEECTTCEECTTCEECSCBCTTE
T ss_pred ECCCcEECCCCEECCCCEECCCcCCCc
Confidence 8888888 5788888888887765543
No 70
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.21 E-value=8.2e-11 Score=96.93 Aligned_cols=112 Identities=14% Similarity=0.186 Sum_probs=72.0
Q ss_pred EEecCCHHHHHHHHHHHHhhhc-----cccCCccCCCceEe--cceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEE
Q 020113 214 WMDIGQPKDYITGLRLYLDFLQ-----KNSSSKLATGSNII--GNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTV 285 (331)
Q Consensus 214 ~~~i~t~~d~~~a~~~~l~~~~-----~~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~i 285 (331)
..-++++....+....+++.-. ..+.+.+++++.|+ ++++|+++++|+.++.|| +++.|. +++|+++|.|
T Consensus 51 ~iaig~~~~r~~~~~~l~~~~~~~~~~i~~~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG--~~~~I~~~~~i~~~~~I 128 (194)
T 3bfp_A 51 FIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIE--KGVILNTSSVIEHECVI 128 (194)
T ss_dssp EECCCCHHHHHHHHHHHHTTTCCBCCEECTTCEECTTCEECTTSCCEECTTCEECTTCEEC--TTCEECTTCEECTTCEE
T ss_pred EEEeCCHHHHHHHHHHHHHcCCccccccCCeEEECCCceeCCCCCcEEcCCCEECCCCEEC--CCCEECCCCEEcCCCEE
Confidence 3455666554444444332211 12334455555666 666666666666666666 667774 6777777777
Q ss_pred CCCcEEccceEECCCcEECcccEEc-CcEEccCeEEccCccCC
Q 020113 286 GRWARVENMTILGEDVHVADEVYSN-GAVVLPHKEIKSSIVNP 327 (331)
Q Consensus 286 g~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~~~~~i~~~~~~~ 327 (331)
|++|+|..+++|.++++||+++.|. ++.|.++++|+++....
T Consensus 129 g~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig 171 (194)
T 3bfp_A 129 GEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILG 171 (194)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CCCCEECCCCEECCCcEECCCCEEcCCCEECCCCEECCCCEEC
Confidence 7888887778888888888888884 77788888888776654
No 71
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.20 E-value=3.8e-11 Score=100.47 Aligned_cols=49 Identities=12% Similarity=0.078 Sum_probs=29.1
Q ss_pred CEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEccCeEEccCcc
Q 020113 277 SIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLPHKEIKSSIV 325 (331)
Q Consensus 277 s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~~~~i~~~~~ 325 (331)
++||++|.|+.++.|.++++||++|.||.+++|.+++|+++++|+++..
T Consensus 112 ~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~ 160 (213)
T 3kwd_A 112 VWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFNARVGAGCVVMMHVL 160 (213)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCE
T ss_pred eEECCCcEECCCcEEcCCCEECCCCEECCCCEEeCcEECCCCEEcCCCE
Confidence 5566666666666666556666666666666665555555555554443
No 72
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.20 E-value=5.4e-11 Score=97.46 Aligned_cols=87 Identities=18% Similarity=0.166 Sum_probs=74.0
Q ss_pred cCCccCCCceEecceEEcCCcEECCCcEECCCCCceEe-C---CEEcCCCEECCCcEE-----------ccceEECCCcE
Q 020113 238 SSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-S---SIIGWHSTVGRWARV-----------ENMTILGEDVH 302 (331)
Q Consensus 238 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~---s~i~~~~~ig~~~~i-----------~~~~~i~~~~~ 302 (331)
....+++++.|.++++|++++.||++|.|+ ++++|. + ++||++|.|+++|.| ...++||++|.
T Consensus 14 ~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~--~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~ 91 (187)
T 3r3r_A 14 LFPGIGQRVMIDTSSVVIGDVRLADDVGIW--PLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVT 91 (187)
T ss_dssp BCCEECTTCEECTTCEEEEEEEECTTCEEC--TTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCE
T ss_pred cCcccCCCeEECCCCEEECceEECCCCEEC--CCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCE
Confidence 345688999999999998899999999999 779886 3 499999999999999 34499999999
Q ss_pred ECcccEEcCcEEccCeEEccCccC
Q 020113 303 VADEVYSNGAVVLPHKEIKSSIVN 326 (331)
Q Consensus 303 i~~~~~i~~~~v~~~~~i~~~~~~ 326 (331)
|++++.|.+++|++++.|+.+...
T Consensus 92 Ig~~~~i~~~~Ig~~~~Ig~~~~I 115 (187)
T 3r3r_A 92 VGHKVMLHGCTIGNRVLVGMGSIV 115 (187)
T ss_dssp ECTTCEEESCEECSSEEECTTCEE
T ss_pred ECCCCEEeCcEECCCCEECCCCEE
Confidence 999999988888888888876654
No 73
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.20 E-value=9.4e-11 Score=96.57 Aligned_cols=50 Identities=20% Similarity=0.236 Sum_probs=29.5
Q ss_pred ccCCCceEec--ceEEcCCcEECCCcEECCCCCceEeC---CEEcCCCEECCCcEEc
Q 020113 241 KLATGSNIIG--NVLVHEGAKIGDGCLIGPDKHACISS---SIIGWHSTVGRWARVE 292 (331)
Q Consensus 241 ~i~~~~~i~~--~~~i~~~~~i~~~~~I~~~~~~~i~~---s~i~~~~~ig~~~~i~ 292 (331)
.+++++.|.+ .+.++.++.||++|.|+ .+++|.+ .+||++|.||++|.|.
T Consensus 58 ~ig~~~~I~~p~~~~ig~~v~IG~~~~I~--~~~~i~~~~~i~IG~~~~Ig~~~~I~ 112 (195)
T 3nz2_A 58 HLGHKSCVQPPFHCEFGKTIRIGDHTFIN--MNVVMLDGAPITIGDHVLIGPSTQFY 112 (195)
T ss_dssp EECTTCEECSSEEESCSTTEEECTTCEEC--TTEEEECSSCEEECTTCEECTTCEEE
T ss_pred hcCCCcEEcCCeEEEeCCCeEECCCcEEC--cCCEEecCceEEECCCCEECCCCEEe
Confidence 3566666666 34555666666666666 5566632 3566666666666543
No 74
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=99.20 E-value=9.4e-11 Score=101.09 Aligned_cols=74 Identities=16% Similarity=0.156 Sum_probs=59.0
Q ss_pred ccCCccCCCceEe--cceEEcCCcEECCCcEECCCCCceEeC---------CEEcCCCEECCCcEEccceEECCCcEECc
Q 020113 237 NSSSKLATGSNII--GNVLVHEGAKIGDGCLIGPDKHACISS---------SIIGWHSTVGRWARVENMTILGEDVHVAD 305 (331)
Q Consensus 237 ~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~I~~~~~~~i~~---------s~i~~~~~ig~~~~i~~~~~i~~~~~i~~ 305 (331)
.+.+.|+++++|. .+++|+++++||++|.|+ .+++|.+ ++||++|.||.+++|.++++||++|+||+
T Consensus 168 ~p~a~IG~~v~I~hg~gvvIG~~~~IGd~v~I~--~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG~~a~IGa 245 (287)
T 3mc4_A 168 HPAARLGSGLFLDHATGLVVGETAVVEDNVSIL--HGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAA 245 (287)
T ss_dssp CTTCEECSSCEEESCTTCEECTTCEECSSCEEE--TTCEEEC-----CCCSCEECTTCEECTTCEEESSCEECTTCEECT
T ss_pred CCCCEECCCeEEccCCCeEECCCeEECCCCEEc--CCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEECCCCEECC
Confidence 4455666666666 567777777777777777 6777764 68999999999999998899999999999
Q ss_pred ccEEcCc
Q 020113 306 EVYSNGA 312 (331)
Q Consensus 306 ~~~i~~~ 312 (331)
|++|.+.
T Consensus 246 gsvV~kd 252 (287)
T 3mc4_A 246 GSVVLKS 252 (287)
T ss_dssp TCEECSC
T ss_pred CCEEccc
Confidence 9999643
No 75
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.20 E-value=4.9e-11 Score=96.41 Aligned_cols=77 Identities=14% Similarity=0.233 Sum_probs=37.3
Q ss_pred cCCCceEecceEEcC----CcEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEc-CcEEcc
Q 020113 242 LATGSNIIGNVLVHE----GAKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSN-GAVVLP 316 (331)
Q Consensus 242 i~~~~~i~~~~~i~~----~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~~ 316 (331)
|++++.|++++.|.. ++.||++|.|+ .++.|.+++||++|+||.++.|.+++.||+++.|+.++.+. +..|.+
T Consensus 54 IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig--~~~~i~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~~~i~~ 131 (173)
T 1xhd_A 54 IGDRVNVQDQCTLHQSPQYPLILEDDVTVG--HQVILHSCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVSQGKKIPP 131 (173)
T ss_dssp ECTTCEECTTCEEECCTTCCEEECTTCEEC--TTCEEESCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred ECCCCEECCCCEEEeCCCCCeEECCCCEEC--CCCEEeCCEECCCCEEcCCCEEcCCCEECCCCEECCCCEECCCcEeCC
Confidence 444444444444432 34444444444 44555555555555555555555445555555555555553 234444
Q ss_pred CeEE
Q 020113 317 HKEI 320 (331)
Q Consensus 317 ~~~i 320 (331)
++++
T Consensus 132 ~~vv 135 (173)
T 1xhd_A 132 NTLA 135 (173)
T ss_dssp TEEE
T ss_pred CCEE
Confidence 4433
No 76
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.20 E-value=1.2e-10 Score=105.39 Aligned_cols=66 Identities=21% Similarity=0.357 Sum_probs=33.4
Q ss_pred cCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEccceEECCCcEECcccEE
Q 020113 242 LATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVENMTILGEDVHVADEVYS 309 (331)
Q Consensus 242 i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i 309 (331)
+++++.|+++++|++++.||++|+|+ .+++|. ++.||++|.|++++.|.+++.||++|.|+++++|
T Consensus 134 Ig~~~~I~~~~~I~~~v~IG~~~~I~--~~~~Ig~~v~IG~~~~I~~~~~I~~~~~IG~~v~I~~g~~I 200 (372)
T 3pmo_A 134 VDPSASVGAYAVIESGARIGAGVSIG--AHCVIGARSVIGEGGWLAPRVTLYHDVTIGARVSIQSGAVI 200 (372)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEEC--TTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEE
T ss_pred ECCCCEECCCCEECCCCEECCCCEEC--CCCEECCCCEECCCcccCCCcEEEeeeEECceeeccCCcEE
Confidence 44444444444444455555555554 444443 4555555555555555555555555555555555
No 77
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.19 E-value=4.4e-11 Score=98.32 Aligned_cols=84 Identities=14% Similarity=0.130 Sum_probs=56.9
Q ss_pred CCccCCCceEecceEEcCCcEECCCcEECCCCCceEeC----CEEcCCCEECCCcEEcc-----ceEECCCcEECcccEE
Q 020113 239 SSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISS----SIIGWHSTVGRWARVEN-----MTILGEDVHVADEVYS 309 (331)
Q Consensus 239 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~----s~i~~~~~ig~~~~i~~-----~~~i~~~~~i~~~~~i 309 (331)
...+++++.|.+++.|..++.||++|.|+ +++.|.. .+||++|.|+++|.|.. +++||++|.|++++.+
T Consensus 33 ~~~ig~~~~I~~~~~i~~~v~IG~~~~I~--~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i 110 (191)
T 3ixc_A 33 SPSVDSTAFIAGNARIIGDVCIGKNASIW--YGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCIL 110 (191)
T ss_dssp CCEECTTSEECTTCEEEEEEEECTTCEEC--TTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEE
T ss_pred CCEECCCCEECCCCEEeCCcEECCCCEEC--CCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEE
Confidence 34566777777777777677777777777 6677752 36777777777777762 3777777777777777
Q ss_pred cCcEEccCeEEccCc
Q 020113 310 NGAVVLPHKEIKSSI 324 (331)
Q Consensus 310 ~~~~v~~~~~i~~~~ 324 (331)
.+++|++++.|+++.
T Consensus 111 ~~~~Ig~~~~Ig~~~ 125 (191)
T 3ixc_A 111 HACTLGNNAFVGMGS 125 (191)
T ss_dssp CSCEECTTCEECTTC
T ss_pred ECCEECCCCEECCCC
Confidence 666666666665544
No 78
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.19 E-value=9.4e-11 Score=98.59 Aligned_cols=88 Identities=20% Similarity=0.307 Sum_probs=63.9
Q ss_pred cCCccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEccceEECCCcEECcccEE-cCcEEc
Q 020113 238 SSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVENMTILGEDVHVADEVYS-NGAVVL 315 (331)
Q Consensus 238 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i-~~~~v~ 315 (331)
+.+.+.+.+.|+++++|+++++|++++.|| +++.|. +++|+++|.||++|+|..++.|+++++||++|.| .+++|.
T Consensus 104 ~~a~i~~~v~IG~g~~I~~~~~i~~~~~IG--~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~ 181 (220)
T 4ea9_A 104 PSAVVSPSVRLGEGVAVMAGVAINADSWIG--DLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVGARVI 181 (220)
T ss_dssp TTCEECTTCEECSSCEECTTCEECTTCEEC--TTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEC
T ss_pred CCCEECCCCEECCCCEEcCCCEECCCCEEC--CCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 344556666666667776777777777777 777775 6777777778888888777778777888888887 477788
Q ss_pred cCeEEccCccCC
Q 020113 316 PHKEIKSSIVNP 327 (331)
Q Consensus 316 ~~~~i~~~~~~~ 327 (331)
++++|+++....
T Consensus 182 ~~~~Ig~~~~ig 193 (220)
T 4ea9_A 182 PGVTIGADTIVG 193 (220)
T ss_dssp TTCEECTTCEEC
T ss_pred CCcEECCCCEEC
Confidence 888887776544
No 79
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.18 E-value=9.3e-11 Score=101.73 Aligned_cols=86 Identities=17% Similarity=0.267 Sum_probs=50.4
Q ss_pred ccCCccCCCceEecceEE-----cCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEcc--------ceEECCCcE
Q 020113 237 NSSSKLATGSNIIGNVLV-----HEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVEN--------MTILGEDVH 302 (331)
Q Consensus 237 ~~~~~i~~~~~i~~~~~i-----~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~--------~~~i~~~~~ 302 (331)
.+.+.+++++.|++++.| +.++.||++|.|+ .++.|. ++.||++|.|++++.|.+ .++||++|.
T Consensus 108 ~p~a~I~~~~~Ig~g~~I~~~~i~~~~~IG~~~~I~--~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~v~ 185 (276)
T 3gos_A 108 VPPATVRKGAFIARNTVLMPSYVNIGAFVDEGTMVD--TWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCF 185 (276)
T ss_dssp CTTCEEBTTCEECTTCEECSEEECTTCEECTTCEEC--TTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCE
T ss_pred CCCcEECCCCEECCCCEEcCCEEcCCeEECCCCEEC--CCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCCCE
Confidence 333444444444444333 4466666666666 566665 377777777777776643 467777777
Q ss_pred ECcccEEc-CcEEccCeEEccCc
Q 020113 303 VADEVYSN-GAVVLPHKEIKSSI 324 (331)
Q Consensus 303 i~~~~~i~-~~~v~~~~~i~~~~ 324 (331)
||.+++|. ++.|+++++|+++.
T Consensus 186 IG~~a~I~~gv~IG~~avIgags 208 (276)
T 3gos_A 186 VGARSEVVEGVIVEEGSVISMGV 208 (276)
T ss_dssp ECTTCEECTTCEECTTCEECTTC
T ss_pred ECCCCEECCCCEECCCCEECCCC
Confidence 77777663 55555555555443
No 80
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.18 E-value=5.7e-11 Score=96.02 Aligned_cols=44 Identities=27% Similarity=0.192 Sum_probs=19.8
Q ss_pred CEEcCCCEECCCcEEccceEECCCcEECcccEEc-CcEEccCeEEc
Q 020113 277 SIIGWHSTVGRWARVENMTILGEDVHVADEVYSN-GAVVLPHKEIK 321 (331)
Q Consensus 277 s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~~~~~i~ 321 (331)
++||++|.|++++.|.+ ++||++|.||.++.|. ++.|++++.|+
T Consensus 72 ~~Ig~~~~I~~~~~i~~-~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig 116 (173)
T 1v3w_A 72 TEIGEYVTIGHNAMVHG-AKVGNYVIIGISSVILDGAKIGDHVIIG 116 (173)
T ss_dssp EEECSSCEECTTCEEES-CEECSSEEECTTCEECTTCEECSSEEEC
T ss_pred eEECCCCEECCCCEECC-CEECCCCEECCCCEEeCCCEECCCCEEC
Confidence 44455555554444444 4444444444444432 33333333333
No 81
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.18 E-value=8.5e-11 Score=96.69 Aligned_cols=59 Identities=27% Similarity=0.449 Sum_probs=31.0
Q ss_pred ccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEccceEECCCc
Q 020113 241 KLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVENMTILGEDV 301 (331)
Q Consensus 241 ~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~~~~i~~~~ 301 (331)
.|++++.|.++++|+.++.||++|.|+ .++.|. +++||++|.|+.++.|.++++|++++
T Consensus 17 ~Ig~~~~I~~~~~I~~~~~IG~~~~Ig--~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~ 76 (192)
T 3mqg_A 17 RIGAHSRIWHWVHICGGAEIGEGCSLG--QNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDV 76 (192)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEEC--TTCEECSSCEECSSCEECTTCEECTTEEECTTC
T ss_pred EECCCCEECCCCEECCCcEECCCCEEC--CCEEECCceEECCCcEEcCCcEEeCCCEECCCC
Confidence 445555555555555555555555555 455553 35555555555555554444444443
No 82
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.18 E-value=7.9e-11 Score=95.20 Aligned_cols=51 Identities=10% Similarity=0.121 Sum_probs=24.1
Q ss_pred CCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEc-CcEEccCeEE
Q 020113 270 KHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSN-GAVVLPHKEI 320 (331)
Q Consensus 270 ~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~~~~~i 320 (331)
+++.|.+++||++|+||.++.|.++++||+++.||.++++. +..|.+++++
T Consensus 82 ~~~~i~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~~~i~~~~~v 133 (173)
T 1v3w_A 82 HNAMVHGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVPPNKEIPDYSLV 133 (173)
T ss_dssp TTCEEESCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEECTTEEE
T ss_pred CCCEECCCEECCCCEECCCCEEeCCCEECCCCEECCCCEECCCcEeCCCcEE
Confidence 34444444444444444444444444445555555444443 2444444444
No 83
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.18 E-value=3.2e-11 Score=104.68 Aligned_cols=86 Identities=12% Similarity=0.094 Sum_probs=58.4
Q ss_pred cCCccCCCceEecceEEcCCcEECCCcEECCCCCceEe-----CCEEcCCCEECCCcEEccc--------eEECCCcEEC
Q 020113 238 SSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-----SSIIGWHSTVGRWARVENM--------TILGEDVHVA 304 (331)
Q Consensus 238 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-----~s~i~~~~~ig~~~~i~~~--------~~i~~~~~i~ 304 (331)
+.+.|.+++.|+++++|++++.|+.++.|| +++.|. +++||++|.||+++.|.+. ++||++|.||
T Consensus 189 P~AvI~~GA~IGeGv~Igp~a~Vn~na~IG--dg~iI~~~a~igv~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~IG 266 (347)
T 3r5d_A 189 DTARVRLGAYIGEGTTVMHEGFVNFNAGTE--GPGMIEGRVSAGVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCLIG 266 (347)
T ss_dssp SGGGBBTTEEECTTEEECTTCEECTTEEES--SSEEECSEECTTCEECTTEEECTTCEECC------CCCCEECTTCEEC
T ss_pred CcCEECCCCEECCCCEECCCCEECCCCEEC--CCcEEcCCceEeEEECCCCEECCCCEEccccCCCCccceEECCCCEEC
Confidence 334444455555555444444444444444 444442 4889999999999999875 8999999999
Q ss_pred cccEEcCcEEccCeEEccCccC
Q 020113 305 DEVYSNGAVVLPHKEIKSSIVN 326 (331)
Q Consensus 305 ~~~~i~~~~v~~~~~i~~~~~~ 326 (331)
.|+.| ++.|+++++|+++...
T Consensus 267 AnAtI-GVtIGd~~iIGAGSVV 287 (347)
T 3r5d_A 267 ANAGI-GIPLGDRNIVEAGLYI 287 (347)
T ss_dssp TTCEE-CSCBCTTCEECTTCEE
T ss_pred CCCEE-eeEECCCCEECCCCEE
Confidence 99999 7777777777766544
No 84
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.17 E-value=1e-10 Score=105.41 Aligned_cols=67 Identities=15% Similarity=0.265 Sum_probs=38.2
Q ss_pred ccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEccceEECCCcEECcccEE
Q 020113 241 KLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVENMTILGEDVHVADEVYS 309 (331)
Q Consensus 241 ~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i 309 (331)
.+++++.|+++++|+++++||++|.|+ .++.|. +++||++|.|+++++|.++++||++|.|+++++|
T Consensus 116 ~ig~~~~I~~~~~I~~~~~IG~~~~I~--~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I 183 (357)
T 4e79_A 116 VISETAYIGHYVVIGENCVVGDNTVIQ--SHTKLDDNVEVGKDCFIDSYVTITGSSKLRDRVRIHSSTVI 183 (357)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEEC--TTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEEC--CCCEECCCCEECCCCEECCCcEEecccEEEeEeeccCCeEE
Confidence 344445555555555555555555555 455554 5666666666666666555666666666666655
No 85
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.17 E-value=8.8e-11 Score=96.33 Aligned_cols=62 Identities=21% Similarity=0.323 Sum_probs=37.6
Q ss_pred EECCCcEECCCCCceEeCC------------EEcCCCEECCCcEEccceEECCCcEECcccEE-cCcEEccCeEEccC
Q 020113 259 KIGDGCLIGPDKHACISSS------------IIGWHSTVGRWARVENMTILGEDVHVADEVYS-NGAVVLPHKEIKSS 323 (331)
Q Consensus 259 ~i~~~~~I~~~~~~~i~~s------------~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i-~~~~v~~~~~i~~~ 323 (331)
.||++|.|+ +++.|..+ +||++|.||.+|.|.+ ++||++|.||.++.| .++.|+++++|+++
T Consensus 60 ~IG~~~~I~--~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~i~~~v~Ig~~~~Ig~~ 134 (189)
T 3r1w_A 60 RIGARTSVQ--DGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHG-CTIGNRVLIGMKSMIMDGAIVEDEVIVAAG 134 (189)
T ss_dssp EECTTCEEC--TTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEES-CEECSSEEECTTCEECTTCEECSSCEECTT
T ss_pred EECCCCEEC--CCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeC-cEECCCcEECCCCEEcCCCEECCCCEEccC
Confidence 445555555 55666443 6777777777777766 777777777777766 34455555544443
No 86
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.17 E-value=8.3e-11 Score=100.97 Aligned_cols=83 Identities=20% Similarity=0.228 Sum_probs=52.3
Q ss_pred CccCCCceEecceEEc--CCcEECCCcEECCCCCceEe----CCEEcCCCEECCCcEEccc-------------------
Q 020113 240 SKLATGSNIIGNVLVH--EGAKIGDGCLIGPDKHACIS----SSIIGWHSTVGRWARVENM------------------- 294 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~--~~~~i~~~~~I~~~~~~~i~----~s~i~~~~~ig~~~~i~~~------------------- 294 (331)
..|++++.|.++++|. .++.||++|.|+ +++.|. +++||++|.||++|.|.+.
T Consensus 86 v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig--~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~ 163 (252)
T 3jqy_B 86 VRIHKNSKIKGDIVATKGSKVIIGRRTTIG--AGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKD 163 (252)
T ss_dssp EEECTTCEEEEEEEEESSCEEEECTTCEEC--TTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCC
T ss_pred EEECCCCEECCceEEccCCEEEECCCCEEC--CCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCC
Confidence 3466777777766663 356677777777 666665 5677777777777766663
Q ss_pred eEECCCcEECcccEE-cCcEEccCeEEccCc
Q 020113 295 TILGEDVHVADEVYS-NGAVVLPHKEIKSSI 324 (331)
Q Consensus 295 ~~i~~~~~i~~~~~i-~~~~v~~~~~i~~~~ 324 (331)
++||++|.||.++.| .++.|+++++|+++.
T Consensus 164 v~Igd~v~IG~~a~I~~gv~IG~~~~Igags 194 (252)
T 3jqy_B 164 IIISSYVWVGRNVSIMKGVSVGSGSVIGYGS 194 (252)
T ss_dssp EEECSSCEECSSEEECTTCEECTTCEECTTC
T ss_pred eEEecCcEECCCCEECCCCEECCCCEECCCC
Confidence 466666666666655 345555555554443
No 87
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.17 E-value=7.8e-11 Score=96.65 Aligned_cols=79 Identities=19% Similarity=0.247 Sum_probs=36.0
Q ss_pred cCCCceEecceEEcCCcEECCCcEECCCCCceEe-C---CEEcCCCEECCCcEEcc-----------ceEECCCcEECcc
Q 020113 242 LATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-S---SIIGWHSTVGRWARVEN-----------MTILGEDVHVADE 306 (331)
Q Consensus 242 i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~---s~i~~~~~ig~~~~i~~-----------~~~i~~~~~i~~~ 306 (331)
+++++.|.++++|+.++.||++|.|+ +++.|. + ++||++|.|++++.|.. .++||++|.|+++
T Consensus 22 ig~~~~I~~~~~i~~~v~IG~~~~I~--~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~ 99 (189)
T 3r1w_A 22 LGERVFVDRSSVIIGDVELGDDCSVW--PLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQ 99 (189)
T ss_dssp ECTTCEECTTCEEEEEEEECTTCEEC--TTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTT
T ss_pred ECCCcEECCCCEEeeeeEECCCCEEC--CCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCC
Confidence 44444444444444444444444444 444443 1 24555555555554433 1244555444444
Q ss_pred cEEcCcEEccCeEEcc
Q 020113 307 VYSNGAVVLPHKEIKS 322 (331)
Q Consensus 307 ~~i~~~~v~~~~~i~~ 322 (331)
+.|.+++|++++.|++
T Consensus 100 ~~i~~~~Ig~~~~Ig~ 115 (189)
T 3r1w_A 100 AMLHGCTIGNRVLIGM 115 (189)
T ss_dssp CEEESCEECSSEEECT
T ss_pred CEEeCcEECCCcEECC
Confidence 4444444444444443
No 88
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.17 E-value=1.3e-10 Score=100.25 Aligned_cols=71 Identities=17% Similarity=0.212 Sum_probs=49.4
Q ss_pred cCCccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEE-------------ccceEECCCcEE
Q 020113 238 SSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARV-------------ENMTILGEDVHV 303 (331)
Q Consensus 238 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i-------------~~~~~i~~~~~i 303 (331)
+.+++++++.|+++++|++++.||++|.|+ ++++|. ++.||++|.|++++.| ...++||++|.|
T Consensus 11 ~~a~ig~~v~I~~~~~I~~~v~IG~~~~I~--~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~I 88 (259)
T 3hsq_A 11 PKAELHESVEVGPYSIIEGNVSIQEGTIIE--GHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIF 88 (259)
T ss_dssp TTCEECTTCEECTTCEECSSCEECTTCEEC--TTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEE
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEEc--CCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEE
Confidence 345566667777777777777777777777 667775 4777777777777777 445777777777
Q ss_pred CcccEEc
Q 020113 304 ADEVYSN 310 (331)
Q Consensus 304 ~~~~~i~ 310 (331)
++++.|.
T Consensus 89 g~~~~I~ 95 (259)
T 3hsq_A 89 REYSNIH 95 (259)
T ss_dssp CTTCEEE
T ss_pred CCCCEEC
Confidence 7777665
No 89
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.16 E-value=2.2e-11 Score=101.33 Aligned_cols=71 Identities=11% Similarity=0.078 Sum_probs=60.3
Q ss_pred ccCCccCCCceEecceEEcC--CcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEccc---eEECCCcEECcccEE
Q 020113 237 NSSSKLATGSNIIGNVLVHE--GAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVENM---TILGEDVHVADEVYS 309 (331)
Q Consensus 237 ~~~~~i~~~~~i~~~~~i~~--~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~~---~~i~~~~~i~~~~~i 309 (331)
.....+++++.|++++.|.. ++.||++|.|+ +++.|. +++||++|.|+++|.|... ++||++|.|++++.|
T Consensus 30 ~~~~~ig~~~~I~~~~~i~~~~~v~IG~~~~I~--~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I 106 (205)
T 3vbi_A 30 IGFLSVGKNVLISKKASIYNPGVISIGNNVRID--DFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIV 106 (205)
T ss_dssp TCCSEECSSEEEBTTSEEESGGGEEECSSEEEC--TTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEE
T ss_pred cCCeEECCCCEECCCeEEccCCeeEECCCCEEC--CCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEE
Confidence 34556888999999998887 88999999999 779986 7999999999999999543 889999988888887
No 90
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.15 E-value=1.7e-10 Score=99.90 Aligned_cols=85 Identities=24% Similarity=0.253 Sum_probs=59.4
Q ss_pred cCCccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEc-------------cceEECCCcEE
Q 020113 238 SSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVE-------------NMTILGEDVHV 303 (331)
Q Consensus 238 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~-------------~~~~i~~~~~i 303 (331)
+.+++++++.|+++++|++++.||++|.|+ ++++|. ++.||++|.|++++.|+ ..++||++|.|
T Consensus 15 ~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~--~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~I 92 (266)
T 3r0s_A 15 EGAQLGDDVVIEAYAYVSKDAKIGNNVVIK--QGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATI 92 (266)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEEC--TTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEE
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEEc--CCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEE
Confidence 445666777777777777777777777777 677776 68888888888888884 33778888777
Q ss_pred CcccEEcC--------cEEccCeEEccCc
Q 020113 304 ADEVYSNG--------AVVLPHKEIKSSI 324 (331)
Q Consensus 304 ~~~~~i~~--------~~v~~~~~i~~~~ 324 (331)
+++++|.. +.|++++.|++++
T Consensus 93 g~~~~I~~~~~~~~~~~~IG~~~~I~~~~ 121 (266)
T 3r0s_A 93 REFATINSGTAKGDGFTRIGDNAFIMAYC 121 (266)
T ss_dssp CTTCEEECCCTTTTSEEEECTTCEECTTC
T ss_pred CCceEecCCcccCCccEEECCCceeCCcc
Confidence 77777742 4555555554443
No 91
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.15 E-value=1.1e-10 Score=97.60 Aligned_cols=82 Identities=26% Similarity=0.298 Sum_probs=68.5
Q ss_pred CccCCCceEecceEEcC--------------CcEECCCcEECCCCCceEeC-CEEcCCCEECCCcEEccceEECCCcEEC
Q 020113 240 SKLATGSNIIGNVLVHE--------------GAKIGDGCLIGPDKHACISS-SIIGWHSTVGRWARVENMTILGEDVHVA 304 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~--------------~~~i~~~~~I~~~~~~~i~~-s~i~~~~~ig~~~~i~~~~~i~~~~~i~ 304 (331)
..|++++.|+++++|.. ++.||++|.|+ .++.|.+ ++||++|+||.++.|.+ ++||++|.||
T Consensus 80 v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig--~~~~I~~~v~Ig~~v~IG~~a~I~~-~~Ig~~~~Ig 156 (213)
T 3kwd_A 80 FHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSIT--HMALIHGPAYIGDGCFIGFRSTVFN-ARVGAGCVVM 156 (213)
T ss_dssp EEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEEC--TTCEEEEEEEECTTCEECTTCEEEE-EEECTTCEEC
T ss_pred eEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEEC--CCcEEcCCCEECCCCEECCCCEEeC-cEECCCCEEc
Confidence 45677777777777653 37788888888 8888875 99999999999999998 9999999999
Q ss_pred cccEEcCcEEccCeEEccCc
Q 020113 305 DEVYSNGAVVLPHKEIKSSI 324 (331)
Q Consensus 305 ~~~~i~~~~v~~~~~i~~~~ 324 (331)
+++++.++.|++++.|+++.
T Consensus 157 ags~V~~~~i~~~~~v~~~~ 176 (213)
T 3kwd_A 157 MHVLIQDVEIPPGKYVPSGM 176 (213)
T ss_dssp SSCEEESCEECTTBEECTTC
T ss_pred CCCEECCcEeCCCCEECCCc
Confidence 99999888888888877654
No 92
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.15 E-value=4.5e-10 Score=92.12 Aligned_cols=82 Identities=17% Similarity=0.153 Sum_probs=56.2
Q ss_pred ccCC-CceEecceEE--cCCcEECCCcEECCCCCceEe---CCEEcCCCEECCCcEEc------------------cceE
Q 020113 241 KLAT-GSNIIGNVLV--HEGAKIGDGCLIGPDKHACIS---SSIIGWHSTVGRWARVE------------------NMTI 296 (331)
Q Consensus 241 ~i~~-~~~i~~~~~i--~~~~~i~~~~~I~~~~~~~i~---~s~i~~~~~ig~~~~i~------------------~~~~ 296 (331)
.+++ ++.|.+++.+ +.++.||++|.|+ .+++|. ...||++|.||++|.|. ..++
T Consensus 59 ~~~~~~~~I~~~~~~~~g~~v~IG~~~~I~--~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~ 136 (190)
T 3hjj_A 59 SSADGKAQINPDFRCDYGYNIHVGKSFFAN--FNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVK 136 (190)
T ss_dssp EESSSCCEECSSCEESSSTTEEECTTCEEC--TTCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEE
T ss_pred hcCCCCcEECCCEEEEeCCceEECCceeeC--CCeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeE
Confidence 4566 7888877666 6677888888887 667775 35688888888888872 2357
Q ss_pred ECCCcEECcccEEc-CcEEccCeEEccCc
Q 020113 297 LGEDVHVADEVYSN-GAVVLPHKEIKSSI 324 (331)
Q Consensus 297 i~~~~~i~~~~~i~-~~~v~~~~~i~~~~ 324 (331)
||++|.||.+++|. ++.|+++++|+++.
T Consensus 137 IG~~v~IG~~~~I~~gv~IG~~~vIgags 165 (190)
T 3hjj_A 137 IGNNVWVGGGAIINPGVSIGDNAVIASGA 165 (190)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCC
Confidence 77777777777764 55555555555443
No 93
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.14 E-value=2.2e-10 Score=94.25 Aligned_cols=69 Identities=17% Similarity=0.357 Sum_probs=42.6
Q ss_pred CCccCCCceEecceEEcCCcEECCCcEECCCCCceE-eCCEEcCCCEECCCcEEccceEECCCcEECcccEE
Q 020113 239 SSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACI-SSSIIGWHSTVGRWARVENMTILGEDVHVADEVYS 309 (331)
Q Consensus 239 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i-~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i 309 (331)
.+.+++++.|++++.|++++.|+.++.|| +++.| .+++|++++.||++|.|++++.|+++++||+++.+
T Consensus 9 ~a~I~~~~~Ig~~~~I~~~~~I~~~~~IG--~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i 78 (192)
T 3mqg_A 9 TAIVDEGARIGAHSRIWHWVHICGGAEIG--EGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFC 78 (192)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEEC--TTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEE
T ss_pred CcEECCCCEECCCCEECCCCEECCCcEEC--CCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEE
Confidence 33444445555555555555555556666 66666 35667666777777777666777777777777665
No 94
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.14 E-value=2.9e-10 Score=99.29 Aligned_cols=75 Identities=15% Similarity=0.192 Sum_probs=49.0
Q ss_pred ccCCccCCCceE--ecceEEcCCcEECCCcEECCCCCceEe-CC-----------------EEcCCCEECCCcEEccceE
Q 020113 237 NSSSKLATGSNI--IGNVLVHEGAKIGDGCLIGPDKHACIS-SS-----------------IIGWHSTVGRWARVENMTI 296 (331)
Q Consensus 237 ~~~~~i~~~~~i--~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s-----------------~i~~~~~ig~~~~i~~~~~ 296 (331)
.+.+.|++++.| +.+++|+++++||++|.|+ .+++|. .+ +||++|+||.+|+|.++++
T Consensus 194 ~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~--~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga~Il~gv~ 271 (310)
T 3f1x_A 194 HPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLY--QGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNATILGRVT 271 (310)
T ss_dssp CTTCEECSSCEEESCTTCEECTTCEECSSCEEE--TTCEEECC--------------CCSCEECTTCEECTTCEEESSCE
T ss_pred CCCCEECCCcEECCCCCeEECCceEEcCCCEEC--CCCEECCCccccccccccccCCCCCCEECCCcEEcCCCEECCCcE
Confidence 444555555555 4555555666666666666 555553 23 6788888888888877788
Q ss_pred ECCCcEECcccEEcCcE
Q 020113 297 LGEDVHVADEVYSNGAV 313 (331)
Q Consensus 297 i~~~~~i~~~~~i~~~~ 313 (331)
||++|+||.|++|...+
T Consensus 272 IGd~a~IGagsvV~~dV 288 (310)
T 3f1x_A 272 IGKGATVGGNIWVTENV 288 (310)
T ss_dssp ECTTCEECSSCEECSCB
T ss_pred ECCCCEECCCCEECCcc
Confidence 88888888888876543
No 95
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.14 E-value=1.6e-10 Score=100.45 Aligned_cols=81 Identities=16% Similarity=0.235 Sum_probs=48.7
Q ss_pred cCCCceEecceEEcCCcEECCCcEECCCCCceEe-C--------------CEEcCCCEECCCcEEccceEECCCcEECcc
Q 020113 242 LATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-S--------------SIIGWHSTVGRWARVENMTILGEDVHVADE 306 (331)
Q Consensus 242 i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~--------------s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~ 306 (331)
|++++.|+++++|++++.||++|.|+ ++++|. . ++||++|.|++++.|.++++||+++.|+++
T Consensus 23 Ig~~~~Ig~~~~I~~~v~Ig~~~~I~--~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~ 100 (273)
T 3fs8_A 23 IEDNVYIDYGCIIRDNVHIKKGSFIG--ARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIYGDTIIGDNFQTGHK 100 (273)
T ss_dssp ECTTCEECTTCEECSSEEECTTCEEC--TTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTCEEESSCEECTTCEECSS
T ss_pred ECCCcEECCCCEECCCCEECCCcEEC--CCcEeCCccccccccccccccceEECCCCEECCCCEEeCCCEECCCCEECCc
Confidence 33344444444444444444455554 455553 2 667777777777777655777777777777
Q ss_pred cEEc-CcEEccCeEEccCc
Q 020113 307 VYSN-GAVVLPHKEIKSSI 324 (331)
Q Consensus 307 ~~i~-~~~v~~~~~i~~~~ 324 (331)
+.|. ++.|++++.|+...
T Consensus 101 ~~I~~~~~Ig~~~~Ig~~~ 119 (273)
T 3fs8_A 101 VTIRENTKIGNNVKIGTLS 119 (273)
T ss_dssp CEECSSCEECSSCEECTTC
T ss_pred eEECCCCEECCCCEECccc
Confidence 7774 67777666666544
No 96
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.13 E-value=1.5e-10 Score=99.66 Aligned_cols=84 Identities=11% Similarity=0.132 Sum_probs=56.3
Q ss_pred cCCCceEecceEEcCCcEECCCcEECCC----CCceEe-----CCEEcCCCEECCCcEEccc--------eEECCCcEEC
Q 020113 242 LATGSNIIGNVLVHEGAKIGDGCLIGPD----KHACIS-----SSIIGWHSTVGRWARVENM--------TILGEDVHVA 304 (331)
Q Consensus 242 i~~~~~i~~~~~i~~~~~i~~~~~I~~~----~~~~i~-----~s~i~~~~~ig~~~~i~~~--------~~i~~~~~i~ 304 (331)
|++.++|.+++.|++++.|+++|+|+.+ .+|.|. +++||++|.|++++.|... ++||++|.||
T Consensus 164 I~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~iGv~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv~IG 243 (332)
T 3fsy_A 164 IADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLG 243 (332)
T ss_dssp ESCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECTTCEECTTCEECTTCEECSBCC---CCBCEECTTCEEC
T ss_pred ECCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceecceEECCCCEECCCCEEcCCCCCCCccceEECCCCEEC
Confidence 4444444444444444444444443311 344442 3789999999999999875 8999999999
Q ss_pred cccEEcCcEEccCeEEccCccC
Q 020113 305 DEVYSNGAVVLPHKEIKSSIVN 326 (331)
Q Consensus 305 ~~~~i~~~~v~~~~~i~~~~~~ 326 (331)
.|++| ++.|+++++|+++...
T Consensus 244 anAtI-gVtIGd~~iIGAGSVV 264 (332)
T 3fsy_A 244 ANSGL-GISLGDDCVVEAGLYV 264 (332)
T ss_dssp TTCEE-CSCBCSSCEECTTCEE
T ss_pred CCCEE-eeEECCCCEECCCCEE
Confidence 99999 8888888888776554
No 97
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.13 E-value=1.4e-10 Score=99.16 Aligned_cols=61 Identities=15% Similarity=0.219 Sum_probs=28.7
Q ss_pred cEECCCcEECCCCCceEeC-CEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEccCeEEc
Q 020113 258 AKIGDGCLIGPDKHACISS-SIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLPHKEIK 321 (331)
Q Consensus 258 ~~i~~~~~I~~~~~~~i~~-s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~~~~i~ 321 (331)
+.||++|.|+ .+|.|.+ ++||++|+||.++.|.+ +.||++|.||++++++++.|+++++++
T Consensus 141 v~IG~~v~Ig--~~~~I~~~~~Ig~~v~IG~~a~I~~-v~Ig~~~~IgagsvV~~~~I~~~~~v~ 202 (247)
T 1qre_A 141 VYIGNNVSLA--HQSQVHGPAAVGDDTFIGMQAFVFK-SKVGNNCVLEPRSAAIGVTIPDGRYIP 202 (247)
T ss_dssp EEECTTCEEC--TTCEEEEEEEECTTCEECTTCEEEE-EEECTTCEECTTCEEESCEECTTBEEC
T ss_pred eEECCCCEEC--CCCEEcCCcEECCCCEECCCCEEec-eEECCCCEECCCCEECCeEeCCCCEEC
Confidence 3444444444 4444443 44555555555555544 555555555555555434444444443
No 98
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.13 E-value=1.7e-10 Score=100.28 Aligned_cols=64 Identities=22% Similarity=0.278 Sum_probs=35.9
Q ss_pred EECCCcEECCCCCceEe-CCEEcCCCEECCCcEEccceEECCCcEECcccEEc-CcEEccCeEEccCc
Q 020113 259 KIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVENMTILGEDVHVADEVYSN-GAVVLPHKEIKSSI 324 (331)
Q Consensus 259 ~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~~~~~i~~~~ 324 (331)
.||++|.|+ ++++|. +++||+++.||.++.|+.+++|++++.|+.++.+. ++.|++++.|++++
T Consensus 72 ~Ig~~~~I~--~~~~i~~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~~~~~IG~~~~I~~~~ 137 (273)
T 3fs8_A 72 IIGENALIR--TENVIYGDTIIGDNFQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNV 137 (273)
T ss_dssp EECTTCEEC--TTCEEESSCEECTTCEECSSCEECSSCEECSSCEECTTCEECSSCEECSSCEECTTC
T ss_pred EECCCCEEC--CCCEEeCCCEECCCCEECCceEECCCCEECCCCEECccceeCCceEECCceEECCCC
Confidence 333344444 445553 56666666666666666556666666666666553 45555555544443
No 99
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.13 E-value=2.3e-10 Score=100.72 Aligned_cols=51 Identities=14% Similarity=0.278 Sum_probs=21.8
Q ss_pred CcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEcc--------ceEECCCcEECcccEE
Q 020113 257 GAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVEN--------MTILGEDVHVADEVYS 309 (331)
Q Consensus 257 ~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~--------~~~i~~~~~i~~~~~i 309 (331)
++.||++|.|+ .+++|. ++.||++|.|++++.|.+ .++||++|.||.+++|
T Consensus 174 g~~IG~~~~I~--~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~~a~I 233 (316)
T 3tk8_A 174 GAYVDEGTMVD--TWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGARSEV 233 (316)
T ss_dssp TCEECTTCEEC--TTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEE
T ss_pred CCEECCCCEEc--cceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECCCCEE
Confidence 44444444444 334442 344444444444444333 3444444444444443
No 100
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.13 E-value=2.5e-10 Score=100.11 Aligned_cols=65 Identities=17% Similarity=0.278 Sum_probs=28.6
Q ss_pred CcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEcc--------ceEECCCcEECcccEE-cCcEEccCeEEccC
Q 020113 257 GAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVEN--------MTILGEDVHVADEVYS-NGAVVLPHKEIKSS 323 (331)
Q Consensus 257 ~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~--------~~~i~~~~~i~~~~~i-~~~~v~~~~~i~~~ 323 (331)
++.||++|.|+ .+++|. ++.||++|.|+.++.+.+ .++||++|.||.++.| .++.|+++++|+++
T Consensus 158 ~~~IG~~~~I~--~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgag 232 (304)
T 3eg4_A 158 GAYVDKGAMID--TWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMG 232 (304)
T ss_dssp TCEECTTCEEC--TTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred CCEECCCcEEc--CCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCCcEECCC
Confidence 44444444444 334442 244444444444444433 3455555555555544 23444444444433
No 101
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.12 E-value=2.1e-10 Score=94.49 Aligned_cols=28 Identities=21% Similarity=0.297 Sum_probs=14.2
Q ss_pred CccCCCceEecceEEcCCcEECCCcEEC
Q 020113 240 SKLATGSNIIGNVLVHEGAKIGDGCLIG 267 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~ 267 (331)
.+|+++++|.+++.|+.++.||++|+|+
T Consensus 13 v~I~~~a~I~~~a~I~g~V~IG~~~~I~ 40 (194)
T 3tv0_A 13 VKIAPGAVVCVESEIRGDVTIGPRTVIH 40 (194)
T ss_dssp EEECTTCEECTTSEEESSEEECTTCEEC
T ss_pred CEECCCCEEcCCCEEeCCCEECCCCEEC
Confidence 3455555555555555555555555554
No 102
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.12 E-value=2.1e-10 Score=99.42 Aligned_cols=70 Identities=16% Similarity=0.322 Sum_probs=45.8
Q ss_pred cCCccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEc------------cceEECCCcEEC
Q 020113 238 SSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVE------------NMTILGEDVHVA 304 (331)
Q Consensus 238 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~------------~~~~i~~~~~i~ 304 (331)
+.+.+++++.|+++++|++++.||++|.|+ ++++|. ++.||++|.|++++.|. ..++||+++.|+
T Consensus 12 ~~a~Ig~~~~Ig~~~~I~~~v~IG~~~~I~--~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~~I~ 89 (270)
T 1j2z_A 12 PKAEINKGVEIGEFCVIGDGVKLDEGVKLH--NNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIR 89 (270)
T ss_dssp TTSEECTTCEECTTCEECTTCEECTTCEEC--TTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSCEEC
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEEc--CCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCCEEC
Confidence 345566667777777777777777777777 667776 57777777777777773 225555555555
Q ss_pred cccEE
Q 020113 305 DEVYS 309 (331)
Q Consensus 305 ~~~~i 309 (331)
++++|
T Consensus 90 ~~~~I 94 (270)
T 1j2z_A 90 EFCMI 94 (270)
T ss_dssp TTCEE
T ss_pred CCeEE
Confidence 55544
No 103
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.11 E-value=2.6e-10 Score=100.03 Aligned_cols=69 Identities=20% Similarity=0.190 Sum_probs=52.4
Q ss_pred CccCCCceEecceEEcCCcEECCCcEECCCCCceEeC---------CEEcCCCEECCCcEEccceEECCCcEECcccEEc
Q 020113 240 SKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISS---------SIIGWHSTVGRWARVENMTILGEDVHVADEVYSN 310 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~---------s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~ 310 (331)
..|++++.|..+++|+.++.||++|.|+ .++.+.+ ++||++|.||.+|.|..+++||++|.||.+++|.
T Consensus 159 ~~IG~~~~I~~~~~Ig~~~~IG~~v~I~--~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~ 236 (304)
T 3eg4_A 159 AYVDKGAMIDTWATVGSCAQIGKNVHLS--GGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIG 236 (304)
T ss_dssp CEECTTCEECTTEEECTTCEECTTCEEC--TTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CEECCCcEEcCCcEECCCCccCCCcEEC--CCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCCcEECCCCEEc
Confidence 3455666666666666667777777777 6677755 8888999999998888888888888888888885
No 104
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.11 E-value=2.2e-10 Score=100.11 Aligned_cols=68 Identities=21% Similarity=0.345 Sum_probs=37.8
Q ss_pred ccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEcc------------ceEECCCcEECccc
Q 020113 241 KLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVEN------------MTILGEDVHVADEV 307 (331)
Q Consensus 241 ~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~------------~~~i~~~~~i~~~~ 307 (331)
.+++++.|+++++|++++.||++|.|+ .+++|. +++||++|.|++++.|+. .++||++|.|++++
T Consensus 36 ~ig~~v~Ig~~~~I~~~v~IG~~~~I~--~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~IG~~~~Ig~~~ 113 (283)
T 4eqy_A 36 QLHETVEVGPYAIVGSNVTIGARTTIG--SHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDRNTIREFT 113 (283)
T ss_dssp EECTTCEECTTCEECTTEEECTTCEEC--TTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEEECSSCEECTTE
T ss_pred EECCCCEECCCCEECCCCEECCCCEEC--CCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEEECCCcccCcce
Confidence 334444444444444445555555555 455554 466667777766666621 25666666666666
Q ss_pred EEc
Q 020113 308 YSN 310 (331)
Q Consensus 308 ~i~ 310 (331)
.|.
T Consensus 114 ~I~ 116 (283)
T 4eqy_A 114 TIH 116 (283)
T ss_dssp EEE
T ss_pred eEc
Confidence 664
No 105
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.11 E-value=9.4e-11 Score=108.99 Aligned_cols=86 Identities=16% Similarity=0.146 Sum_probs=74.2
Q ss_pred ccCCccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEcc
Q 020113 237 NSSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLP 316 (331)
Q Consensus 237 ~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~ 316 (331)
.....+++++.|.+.+++..++.||++|.|+ .++.|.+++||++|.|+++|.|.+ |+||++|.|++++.+.+++|++
T Consensus 271 ~~~~~I~~~a~I~p~a~i~g~v~IG~~~~I~--~~a~I~~v~IG~~~~I~~~~~I~~-~vIG~~~~Ig~~a~I~gv~IGd 347 (496)
T 3c8v_A 271 ASGAGSASGASVSGYAVIKGDTVIGENVLVS--QRAYLDNAWMGKGSNAQENCYIIN-SRLERNCVTAHGGKIINAHLGD 347 (496)
T ss_dssp -----CCTTCEECTTSEEESSCEECTTCEEC--TTCEEEEEEECTTCEECTTCEEEE-EEEEESCEECTTCEEESEEEEE
T ss_pred ccCcccCCCcEECCCcEEeCCeEECCCCEEC--CCcEEeceEecCCCEECCCceEec-eEeCCCCEECCCcEEcCceECC
Confidence 3456788999999999999999999999999 789999999999999999999998 9999999999999998888888
Q ss_pred CeEEccCcc
Q 020113 317 HKEIKSSIV 325 (331)
Q Consensus 317 ~~~i~~~~~ 325 (331)
++.|+++..
T Consensus 348 ~v~IG~~a~ 356 (496)
T 3c8v_A 348 MIFTGFNSF 356 (496)
T ss_dssp TCEECTTCE
T ss_pred CcEECCCCE
Confidence 887776653
No 106
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.11 E-value=3.9e-10 Score=101.54 Aligned_cols=101 Identities=15% Similarity=0.227 Sum_probs=47.6
Q ss_pred eEEecCCHHHHHHHHHHHHhhhc----cccCCccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECC
Q 020113 213 FWMDIGQPKDYITGLRLYLDFLQ----KNSSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGR 287 (331)
Q Consensus 213 ~~~~i~t~~d~~~a~~~~l~~~~----~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~ 287 (331)
.+.-+++|...+.....++.... ..+++.+++++.|++++.|+++++|+++++|| +++.|. +++|+++|.||+
T Consensus 78 ~~i~~~~p~~~~~~~~~~~~~~~~~~~i~p~a~I~~~a~ig~~~~I~~~~~I~~~~~IG--~~~~I~~~~~I~~~~~IG~ 155 (357)
T 4e79_A 78 NFIIVDNPYLAFAILTHVFDKKISSTGIESTARIHPSAVISETAYIGHYVVIGENCVVG--DNTVIQSHTKLDDNVEVGK 155 (357)
T ss_dssp EEEECSCHHHHHHHHHTTSSCCCCCCEECTTCEECTTCEECTTCEECTTCEECTTCEEC--TTCEECTTCEECTTCEECS
T ss_pred cEEEECCHHHHHHHHHHHhccccccCeeCCCCEECCCCEECCCCEECCCCEECCCCEEC--CCCEECCCCEECCCCEECC
Confidence 46667777754433222221111 12223334444444444444444444444444 445553 455555555555
Q ss_pred CcEEccceEECCCcEECcccEEc-CcEEc
Q 020113 288 WARVENMTILGEDVHVADEVYSN-GAVVL 315 (331)
Q Consensus 288 ~~~i~~~~~i~~~~~i~~~~~i~-~~~v~ 315 (331)
+|.|..++.|+++++||++|.|. +++|+
T Consensus 156 ~~~I~~~~~I~~~~~IG~~~~I~~g~~Ig 184 (357)
T 4e79_A 156 DCFIDSYVTITGSSKLRDRVRIHSSTVIG 184 (357)
T ss_dssp SCEECTTCEECTTCEECSSCEECTTCEES
T ss_pred CCEECCCcEEecccEEEeEeeccCCeEEC
Confidence 55555555555555555555552 45553
No 107
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.10 E-value=5e-10 Score=91.02 Aligned_cols=76 Identities=12% Similarity=0.103 Sum_probs=38.2
Q ss_pred CceEecc--eEEcCCcEECCCcEECCCCCceEe---CCEEcCCCEECCCcEEc------------------cceEECCCc
Q 020113 245 GSNIIGN--VLVHEGAKIGDGCLIGPDKHACIS---SSIIGWHSTVGRWARVE------------------NMTILGEDV 301 (331)
Q Consensus 245 ~~~i~~~--~~i~~~~~i~~~~~I~~~~~~~i~---~s~i~~~~~ig~~~~i~------------------~~~~i~~~~ 301 (331)
++.|.++ +.++.++.||++|.|+ .+++|. ..+||++|.||++|.|. ..++||++|
T Consensus 58 ~~~I~~~~~~~~g~~v~IG~~~~I~--~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v 135 (182)
T 1ocx_A 58 EAYIEPTFRCDYGYNIFLGNNFFAN--FDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNV 135 (182)
T ss_dssp SEEECSCEEESSSTTEEECSSEEEC--SSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTC
T ss_pred CEEEeCCEEEEeCCCEEECCCcEEe--CCeEEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCe
Confidence 5555554 2234555555555555 445553 24555666666555552 225555555
Q ss_pred EECcccEEc-CcEEccCeEEcc
Q 020113 302 HVADEVYSN-GAVVLPHKEIKS 322 (331)
Q Consensus 302 ~i~~~~~i~-~~~v~~~~~i~~ 322 (331)
.||.++.|. ++.|+++++|++
T Consensus 136 ~Ig~~a~I~~gv~IG~~~vIga 157 (182)
T 1ocx_A 136 WIGGRAVINPGVTIGDNVVVAS 157 (182)
T ss_dssp EECTTCEECTTCEECTTCEECT
T ss_pred EECCCCEECCCcEECCCCEECC
Confidence 555555542 344444444443
No 108
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.10 E-value=2e-10 Score=100.62 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=14.2
Q ss_pred EEcCCCEECCCcEEccceEECCCcEECcccEE
Q 020113 278 IIGWHSTVGRWARVENMTILGEDVHVADEVYS 309 (331)
Q Consensus 278 ~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i 309 (331)
+||++|+||.+|+|.++++||++|.||+|++|
T Consensus 225 ~IGd~v~IGaga~Ilggv~IG~~a~IGagsvV 256 (313)
T 3q1x_A 225 TVGDYVTIGTGAKVLGNIIVGSHVRIGANCWI 256 (313)
T ss_dssp EECSSCEECTTCEEESSCEECSSEEECTTCEE
T ss_pred EECCCCEECCCCEECCCcEECCCCEECCCCEE
Confidence 44444444444444444444444444444444
No 109
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=99.10 E-value=6e-10 Score=95.41 Aligned_cols=73 Identities=12% Similarity=0.133 Sum_probs=58.3
Q ss_pred ccCCccCCCceEe--cceEEcCCcEECCCcEECCCCCceEeC---------CEEcCCCEECCCcEEccceEECCCcEECc
Q 020113 237 NSSSKLATGSNII--GNVLVHEGAKIGDGCLIGPDKHACISS---------SIIGWHSTVGRWARVENMTILGEDVHVAD 305 (331)
Q Consensus 237 ~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~I~~~~~~~i~~---------s~i~~~~~ig~~~~i~~~~~i~~~~~i~~ 305 (331)
.+.+.|+++++|. .+++||++++||++|.|+ .+++|.+ ++||++|.||.+++|.++++||++|+||.
T Consensus 141 ~p~a~IG~g~~I~~~~~vvIG~~~~IG~~v~I~--~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~gv~IG~~a~IGa 218 (267)
T 1ssq_A 141 HPAAKIGHGIMFDHATGIVVGETSVIENDVSIL--QGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGA 218 (267)
T ss_dssp CTTCEECSSCEESSCTTCEECTTCEECTTCEEC--TTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEECT
T ss_pred CCCCEECCCEEECCCCceEECCeeEECCCCEEc--CCcEECCCcccCCCCCeEECCCeEEcCCCEEeCCcEECCCCEECC
Confidence 4455666777666 367777778888888888 7788764 58999999999999988899999999999
Q ss_pred ccEEcC
Q 020113 306 EVYSNG 311 (331)
Q Consensus 306 ~~~i~~ 311 (331)
|+++..
T Consensus 219 gsvV~~ 224 (267)
T 1ssq_A 219 NSVVLN 224 (267)
T ss_dssp TCEECS
T ss_pred CCEEcc
Confidence 999864
No 110
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.10 E-value=1.5e-10 Score=106.36 Aligned_cols=69 Identities=19% Similarity=0.201 Sum_probs=54.3
Q ss_pred CCccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEc
Q 020113 239 SSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSN 310 (331)
Q Consensus 239 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~ 310 (331)
+..|++++.|+++++|+++++||++|.|+ .++.|.+|+|++++.|++++.|.+ ++||++|.||+++.+.
T Consensus 262 ~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig--~~~~i~~~~i~~~~~i~~~~~i~~-~~Ig~~~~Ig~~~~i~ 330 (401)
T 2ggo_A 262 PVYIGKGSEIGPNSYLRPYTILVEKNKIG--ASVEVKESVIMEGSKIPHLSYVGD-SVIAEDVNFGAGTLIA 330 (401)
T ss_dssp SEEECTTCEECSSCEECTTEEECSSCEEE--ETCEEESEEECTTCEEEESCEEES-CEECTTCEECTTCEEC
T ss_pred CeEECCCCEECCCCEEcCCcEECCCCEEC--CCCEEecCEEcCCcEECCCceEcc-eEECCCcEECCCcEEc
Confidence 44567777777777777778888888888 778888888888888888888877 8888888888777765
No 111
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.09 E-value=3.4e-10 Score=98.20 Aligned_cols=71 Identities=20% Similarity=0.186 Sum_probs=57.6
Q ss_pred CCccCCCceEecceEEcCCcEECCCcEECCCCCceEe---------CCEEcCCCEECCCcEEccceEECCCcEECcccEE
Q 020113 239 SSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS---------SSIIGWHSTVGRWARVENMTILGEDVHVADEVYS 309 (331)
Q Consensus 239 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~---------~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i 309 (331)
...|++++.|.++++|+.++.||++|.|+ .++.+. +++||++|.||.+|.|..++.||++|.||.+++|
T Consensus 133 ~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~--~~~~i~g~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV 210 (276)
T 3gos_A 133 GAFVDEGTMVDTWATVGSCAQIGKNVHLS--GGVGIGGVLEPLQANPTIIEDNCFVGARSEVVEGVIVEEGSVISMGVFI 210 (276)
T ss_dssp TCEECTTCEECTTEEECTTCEECTTCEEC--TTCEECCCCSSTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CeEECCCCEECCCCEECCCCEECCCCEEC--CCCEECCccccCCCCCeEECCCCEECCCCEECCCCEECCCCEECCCCEE
Confidence 44677777777778887778888888888 677774 4889999999999999888999999999999888
Q ss_pred cC
Q 020113 310 NG 311 (331)
Q Consensus 310 ~~ 311 (331)
..
T Consensus 211 ~~ 212 (276)
T 3gos_A 211 GQ 212 (276)
T ss_dssp CT
T ss_pred CC
Confidence 53
No 112
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.09 E-value=3.6e-10 Score=97.63 Aligned_cols=85 Identities=14% Similarity=0.256 Sum_probs=61.7
Q ss_pred CCccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEcc------------ceEECCCcEECc
Q 020113 239 SSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVEN------------MTILGEDVHVAD 305 (331)
Q Consensus 239 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~------------~~~i~~~~~i~~ 305 (331)
.+.+++++.|+++++|++++.||++|.|+ ++++|. ++.||++|.|++++.|.. .++||+++.|++
T Consensus 17 ~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~--~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~ 94 (262)
T 2qia_A 17 GASIGANAHIGPFCIVGPHVEIGEGTVLK--SHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRE 94 (262)
T ss_dssp TCEECTTCEECTTCEECTTEEECTTCEEC--SSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEECT
T ss_pred CCEECCCCEECCCCEECCCCEECCCcEEC--CCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCceeCC
Confidence 34455666666666666666677777777 667775 688888888888888852 488899999999
Q ss_pred ccEEcC--------cEEccCeEEccCcc
Q 020113 306 EVYSNG--------AVVLPHKEIKSSIV 325 (331)
Q Consensus 306 ~~~i~~--------~~v~~~~~i~~~~~ 325 (331)
++.|.. +.|++++.|++++.
T Consensus 95 ~~~I~~~~~~~~~~~~IG~~~~Ig~~~~ 122 (262)
T 2qia_A 95 SVTIHRGTVQGGGLTKVGSDNLLMINAH 122 (262)
T ss_dssp TCEEECCCTTTTSEEEECSSCEECTTCE
T ss_pred CCEEcCCccCCCCcCEECCCcEEeeeeE
Confidence 998853 77777777776554
No 113
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.09 E-value=2.8e-10 Score=99.34 Aligned_cols=66 Identities=24% Similarity=0.380 Sum_probs=40.7
Q ss_pred ccCCccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEE
Q 020113 237 NSSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYS 309 (331)
Q Consensus 237 ~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i 309 (331)
.+...|++++.|.+++.|++++.|+++|+|++ ++.||++|.|++++.|.+++.||++|.|++++.|
T Consensus 20 ~~~~~I~p~a~I~~~a~ig~~v~Ig~~~~I~~-------~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~I 85 (283)
T 4eqy_A 20 GSMSRIHPTAIIEPGAQLHETVEVGPYAIVGS-------NVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASV 85 (283)
T ss_dssp ---CCBCTTCEECTTCEECTTCEECTTCEECT-------TEEECTTCEECTTCEECSEEEECSSCEECTTEEE
T ss_pred CCCcccCCCCEECCCCEECCCCEECCCCEECC-------CCEECCCCEECCCCEECCCcEECCCcEEcCCcEE
Confidence 34445667777766666666666666666662 3566666666666666655666666666666666
No 114
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.09 E-value=3.1e-10 Score=98.06 Aligned_cols=79 Identities=19% Similarity=0.203 Sum_probs=45.1
Q ss_pred cCCCceEecceEEcCCcEECCCcEECCCCCceEe-------------CCEEcCCCEECCCcEEcc-------ceEECCCc
Q 020113 242 LATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-------------SSIIGWHSTVGRWARVEN-------MTILGEDV 301 (331)
Q Consensus 242 i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-------------~s~i~~~~~ig~~~~i~~-------~~~i~~~~ 301 (331)
|++++.|+++++|+.++.||++|.|+ .+++|. +++||++|.|+++|+|.. .++||++|
T Consensus 38 IG~~~~I~~~~~I~~~~~IG~~~~I~--~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~ 115 (262)
T 2qia_A 38 IGEGTVLKSHVVVNGHTKIGRDNEIY--QFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDN 115 (262)
T ss_dssp ECTTCEECSSCEECSEEEECSSCEEC--TTCEEEECCSCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEEECSSC
T ss_pred ECCCcEECCCCEECCCcEECCCCEEe--cceEECcCCccccccCCccceEECCCceeCCCCEEcCCccCCCCcCEECCCc
Confidence 44444444444444455555555555 555553 466777777777777754 26677777
Q ss_pred EECcccEE-cCcEEccCeEEcc
Q 020113 302 HVADEVYS-NGAVVLPHKEIKS 322 (331)
Q Consensus 302 ~i~~~~~i-~~~~v~~~~~i~~ 322 (331)
.|++++.| .++.|++++.|+.
T Consensus 116 ~Ig~~~~I~~~~~Ig~~~~i~~ 137 (262)
T 2qia_A 116 LLMINAHIAHDCTVGNRCILAN 137 (262)
T ss_dssp EECTTCEECTTCEECSSCEECT
T ss_pred EEeeeeEECCCCEECCCeEECC
Confidence 76666666 3455555444443
No 115
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.09 E-value=3.5e-10 Score=97.88 Aligned_cols=69 Identities=16% Similarity=0.251 Sum_probs=40.3
Q ss_pred CccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEc------------cceEECCCcEECcc
Q 020113 240 SKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVE------------NMTILGEDVHVADE 306 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~------------~~~~i~~~~~i~~~ 306 (331)
+.+++++.|+++++|++++.||++|.|+ ++++|. ++.||++|.|++++.|+ ..++||+++.|+++
T Consensus 20 a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~--~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~Ig~~ 97 (265)
T 4e6u_A 20 AVIASDVQIGPYCIIGPQVTIGAGTKLH--SHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREH 97 (265)
T ss_dssp CEECTTCEECTTCEECTTEEECTTCEEC--SSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEECTT
T ss_pred CEECCCCEECCCeEECCCCEECCCCEEc--CCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEECCc
Confidence 3445555555555555555555555555 556664 46666666666666662 13666666666666
Q ss_pred cEEc
Q 020113 307 VYSN 310 (331)
Q Consensus 307 ~~i~ 310 (331)
+.|.
T Consensus 98 ~~I~ 101 (265)
T 4e6u_A 98 CSLH 101 (265)
T ss_dssp CEEE
T ss_pred eEEC
Confidence 6664
No 116
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=99.08 E-value=4.7e-10 Score=100.22 Aligned_cols=117 Identities=15% Similarity=0.143 Sum_probs=69.7
Q ss_pred EEeCceEEecCC--HHHHHHHHHHHHhhhc------------------cccCCccCCCceEecceEEcCCcEECCC-cEE
Q 020113 208 MVLPGFWMDIGQ--PKDYITGLRLYLDFLQ------------------KNSSSKLATGSNIIGNVLVHEGAKIGDG-CLI 266 (331)
Q Consensus 208 ~~~~~~~~~i~t--~~d~~~a~~~~l~~~~------------------~~~~~~i~~~~~i~~~~~i~~~~~i~~~-~~I 266 (331)
+....+|.+.++ |++|......+..+-. .....+|++++.|.+++.|++++.|+++ |+|
T Consensus 166 ~l~~~~Wt~~G~~~~~~f~~~~~~l~~~G~~~~~~~~dk~p~~~~~v~p~~gv~I~p~a~I~~~a~IG~gv~Ig~g~a~I 245 (387)
T 2rij_A 166 LLSNVAWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTRILESSKVRMGASLAAGTTIMPGASYV 245 (387)
T ss_dssp HSCCEEEETTEEECHHHHHHHHHHHHHTTCCCCCCEEESSCBGGGTCCCCTTCEESCGGGBBTTCBCCTTCEECSSSCEE
T ss_pred cCceeeeccCcccCHHHHHHHHHHHHhcCCccceeecccccchhccccCCCCEEEcCCCEECCCeEEcCCCEEeCCeeEE
Confidence 334567999888 7888888777663210 0012334444454444444444444443 444
Q ss_pred CCC-----CCceE-----eCCEEcCCCEECCCcEE----ccc----eEECCCcEECcccEEcCcEEccCeEEccCccC
Q 020113 267 GPD-----KHACI-----SSSIIGWHSTVGRWARV----ENM----TILGEDVHVADEVYSNGAVVLPHKEIKSSIVN 326 (331)
Q Consensus 267 ~~~-----~~~~i-----~~s~i~~~~~ig~~~~i----~~~----~~i~~~~~i~~~~~i~~~~v~~~~~i~~~~~~ 326 (331)
+++ + +.| .+++||++|.|++++.| .++ ++||++|.||.++. .++.|+++++|+++...
T Consensus 246 g~nv~vIG~-~~I~~~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv-~GV~IGdgavIGAGsVV 321 (387)
T 2rij_A 246 NFNAGTTGA-CMVEGRISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKACLLGANSV-TGIPLGDNCIVDAGIAV 321 (387)
T ss_dssp CTTCEESSC-CEECSEECTTCEECTTCEECTTCEECCBCSSTTCCBCEECTTCEECTTCE-ECSCBCTTCEECTTCEE
T ss_pred CCCcEEECC-EEEeeEECCCCEECCCCEECCCceEcceecCCCccCeEEeCCCEECCCCc-CCcEECCCCEECCCCEE
Confidence 411 3 333 24666666666666653 222 68899999999888 77777777777776543
No 117
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.08 E-value=3.8e-10 Score=96.50 Aligned_cols=50 Identities=12% Similarity=0.173 Sum_probs=38.4
Q ss_pred CEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEccCeEEccCccC
Q 020113 277 SIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLPHKEIKSSIVN 326 (331)
Q Consensus 277 s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~~~~i~~~~~~ 326 (331)
++||++|.||++|.|.+.++||++|.||.++.|.++.|+++++|+++...
T Consensus 141 v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 141 VYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAA 190 (247)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEE
T ss_pred eEECCCCEECCCCEEcCCcEECCCCEECCCCEEeceEECCCCEECCCCEE
Confidence 77888888888888887788888888888888755666666666655443
No 118
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.07 E-value=4e-10 Score=97.49 Aligned_cols=64 Identities=17% Similarity=0.189 Sum_probs=32.5
Q ss_pred CCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEccceEECCCcEECcccEE
Q 020113 244 TGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVENMTILGEDVHVADEVYS 309 (331)
Q Consensus 244 ~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i 309 (331)
..+.|++.++|++++.|+++|.|+ +++.|. ++.||++|.|++++.|.+++.||++|.|++++.|
T Consensus 6 ~~~~I~p~a~i~~~a~Ig~~v~Ig--~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~I 70 (265)
T 4e6u_A 6 NHDLIHSTAIIDPSAVIASDVQIG--PYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASV 70 (265)
T ss_dssp --CCBCTTCEECTTCEECTTCEEC--TTCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEE
T ss_pred CCCeECCCCEECCCCEECCCCEEC--CCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEE
Confidence 333444444444444444444444 334442 3556666666666666655666666666666665
No 119
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.07 E-value=9.2e-10 Score=96.38 Aligned_cols=84 Identities=20% Similarity=0.279 Sum_probs=52.2
Q ss_pred CCccCCCceEecceEE--cCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEccc----eEECCCcEECcccEEc-
Q 020113 239 SSKLATGSNIIGNVLV--HEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVENM----TILGEDVHVADEVYSN- 310 (331)
Q Consensus 239 ~~~i~~~~~i~~~~~i--~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~~----~~i~~~~~i~~~~~i~- 310 (331)
...|++++.|+++++| +.+++||++|+|| +++.|. +++||+++.++.++.+..+ ++||++|.||.++.|.
T Consensus 163 gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG--~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilg 240 (313)
T 3q1x_A 163 SIDIHPGASIKGHFFIDHGVGVVIGETAIIG--EWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLG 240 (313)
T ss_dssp CCEECTTCEECSSCEESSCTTCEECTTCEEC--SSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEES
T ss_pred CeEECCCCEECCCEEECCCCceEECCCcEEC--CCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEECC
Confidence 4456777777777777 4566777777777 666663 5666666666666555442 3677777777777653
Q ss_pred CcEEccCeEEccCc
Q 020113 311 GAVVLPHKEIKSSI 324 (331)
Q Consensus 311 ~~~v~~~~~i~~~~ 324 (331)
++.|+++++|+++.
T Consensus 241 gv~IG~~a~IGags 254 (313)
T 3q1x_A 241 NIIVGSHVRIGANC 254 (313)
T ss_dssp SCEECSSEEECTTC
T ss_pred CcEECCCCEECCCC
Confidence 45555555555443
No 120
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=99.07 E-value=1.2e-09 Score=94.45 Aligned_cols=73 Identities=15% Similarity=0.153 Sum_probs=56.5
Q ss_pred ccCCccCCCceEe--cceEEcCCcEECCCcEECCCCCceEeC---------CEEcCCCEECCCcEEccceEECCCcEECc
Q 020113 237 NSSSKLATGSNII--GNVLVHEGAKIGDGCLIGPDKHACISS---------SIIGWHSTVGRWARVENMTILGEDVHVAD 305 (331)
Q Consensus 237 ~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~I~~~~~~~i~~---------s~i~~~~~ig~~~~i~~~~~i~~~~~i~~ 305 (331)
.+.++|+++++|. .+++||++++||++|.|+ .+++|.+ ++||++|.||.++.|.++++||++|+||.
T Consensus 161 ~p~a~IG~gv~I~~g~gvvIG~~~~IG~~v~I~--~gvtLg~~~~~~~~~~~~IGd~v~IGaga~Ilggv~IG~~a~IGa 238 (289)
T 1t3d_A 161 HPAAKIGRGIMLDHATGIVVGETAVIENDVSIL--QSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGA 238 (289)
T ss_dssp CTTCEECSSCEECSCTTCEECTTCEECSSCEEC--TTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEECT
T ss_pred cCCCEEcCCEEECCCCceEECCCcEECCCCEEc--CCcEECCCccccCCCCeEECCCeEECCCCEEecCcEECCCCEECC
Confidence 3455666666665 356777777777777777 6677754 68999999999999988899999999999
Q ss_pred ccEEcC
Q 020113 306 EVYSNG 311 (331)
Q Consensus 306 ~~~i~~ 311 (331)
|+++..
T Consensus 239 gsvV~~ 244 (289)
T 1t3d_A 239 GSVVLQ 244 (289)
T ss_dssp TCEECS
T ss_pred CCEEcc
Confidence 998864
No 121
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.06 E-value=5.7e-10 Score=98.46 Aligned_cols=69 Identities=14% Similarity=0.242 Sum_probs=46.8
Q ss_pred CCccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEcc----ceEECCCcEECcccEE
Q 020113 239 SSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVEN----MTILGEDVHVADEVYS 309 (331)
Q Consensus 239 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~----~~~i~~~~~i~~~~~i 309 (331)
.+.+++++.|+++++|++++.||++|.|+ ++++|. ++.||++|.|++++.|.. +++||+++.|++++.|
T Consensus 19 ~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~--~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~~a~I 92 (305)
T 3t57_A 19 NAVIGKGVSVGPYCTIGSSVKLGNGCKLY--PSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGHHAVV 92 (305)
T ss_dssp TSEECTTCEECTTCEECTTEEECTTCEEC--TTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECTTCEE
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEEC--CCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECCccEe
Confidence 44555666666666666666666666666 667775 677777777777777763 3777777777777776
No 122
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.06 E-value=5.2e-10 Score=98.42 Aligned_cols=69 Identities=20% Similarity=0.198 Sum_probs=50.5
Q ss_pred ccCCCceEecceEEcCCcEECCCcEECCCCCceEeC---------CEEcCCCEECCCcEEccceEECCCcEECcccEEcC
Q 020113 241 KLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISS---------SIIGWHSTVGRWARVENMTILGEDVHVADEVYSNG 311 (331)
Q Consensus 241 ~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~---------s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~ 311 (331)
.|++++.|..+++|+.++.||++|.|+ .++.|.+ ++||++|.||.+|.|..++.||++|.||+|++|..
T Consensus 176 ~IG~~~~I~~~~~Ig~~~~IG~~v~I~--~~~~I~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~g~vIgagsvV~~ 253 (316)
T 3tk8_A 176 YVDEGTMVDTWATVGSCAQIGKNVHLS--GGVGIGGVLEPLQANPVIIEDNCFIGARSEVVEGVIVEENSVISMGVYLGQ 253 (316)
T ss_dssp EECTTCEECTTEEECTTCEECTTCEEC--TTCEECCCCSSTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred EECCCCEEccceEECCCCEECCCCEEc--CCCEECCCcccccCCCcEECCCCEECCCCEEcCCCEECCCCEEcCCCEEcC
Confidence 456666666666666677777777777 6666644 77888888888888887788888888888888753
No 123
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.06 E-value=6.3e-10 Score=100.68 Aligned_cols=100 Identities=22% Similarity=0.226 Sum_probs=65.1
Q ss_pred EEecCCHHHHHHHHHHHHhhhc-----cccCCccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECC
Q 020113 214 WMDIGQPKDYITGLRLYLDFLQ-----KNSSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGR 287 (331)
Q Consensus 214 ~~~i~t~~d~~~a~~~~l~~~~-----~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~ 287 (331)
+.-+++|+..+.....++.... ..+.+.+++++.|+++++|+++++|+++++|| +++.|. +++|+++|.||+
T Consensus 95 ~l~~~~p~~~~~~~~~~~~~~~~~~~~i~p~a~i~~~a~Ig~~~~I~~~~~I~~~v~IG--~~~~I~~~~~Ig~~v~IG~ 172 (372)
T 3pmo_A 95 ALVVANPYLAYASLSHLFDRKPKAAAGIHPTAIVAADAEVDPSASVGAYAVIESGARIG--AGVSIGAHCVIGARSVIGE 172 (372)
T ss_dssp EEECSCHHHHHHHHHGGGCCCCCCCSEECTTCEECTTCEECTTCEECTTCEECTTCEEC--TTCEECTTCEECTTCEECT
T ss_pred EEEECCHHHHHHHHHHHhccccccccccCCCCEECCCCEECCCCEECCCCEECCCCEEC--CCCEECCCCEECCCCEECC
Confidence 5666777655533222222111 12344555666666666666677777777777 777773 678888888888
Q ss_pred CcEEccceEECCCcEECcccEEc-CcEEc
Q 020113 288 WARVENMTILGEDVHVADEVYSN-GAVVL 315 (331)
Q Consensus 288 ~~~i~~~~~i~~~~~i~~~~~i~-~~~v~ 315 (331)
+|.|..+++|+++++||++|.|. ++.|+
T Consensus 173 ~~~I~~~~~I~~~~~IG~~v~I~~g~~Ig 201 (372)
T 3pmo_A 173 GGWLAPRVTLYHDVTIGARVSIQSGAVIG 201 (372)
T ss_dssp TCEECTTCEECTTEEECTTCEECTTCEEE
T ss_pred CcccCCCcEEEeeeEECceeeccCCcEEe
Confidence 88888668888888888888885 67764
No 124
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.06 E-value=6e-10 Score=96.54 Aligned_cols=61 Identities=16% Similarity=0.263 Sum_probs=38.2
Q ss_pred cCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEE
Q 020113 242 LATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYS 309 (331)
Q Consensus 242 i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i 309 (331)
|++++.|.+++.|++++.|+++|.|++ +++||++|+|+++|.|.+++.||++|.|++++.|
T Consensus 4 I~p~a~I~~~a~Ig~~~~Ig~~~~I~~-------~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~I 64 (270)
T 1j2z_A 4 IAKTAIISPKAEINKGVEIGEFCVIGD-------GVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVL 64 (270)
T ss_dssp BCTTCEECTTSEECTTCEECTTCEECT-------TCEECTTCEECTTCEECSEEEECTTCEECTTCEE
T ss_pred cCCCCEECCCCEECCCCEECCCCEECC-------CCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEE
Confidence 556666666666655555555555552 3666666666666666655666666666666666
No 125
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.06 E-value=5.4e-10 Score=98.60 Aligned_cols=78 Identities=18% Similarity=0.179 Sum_probs=46.0
Q ss_pred CCccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEc-----CcE
Q 020113 239 SSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSN-----GAV 313 (331)
Q Consensus 239 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~-----~~~ 313 (331)
+..|++++.|.+++.|++++.||++|+|++ ++.||++|.|++++.|.+++.||++|.|++++.|. ++.
T Consensus 7 ~~~I~p~A~I~~~a~Ig~~v~Ig~~~~I~~-------~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~ 79 (305)
T 3t57_A 7 EVLIHPSAVVHPNAVIGKGVSVGPYCTIGS-------SVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTF 79 (305)
T ss_dssp --CBCTTSEECTTSEECTTCEECTTCEECT-------TEEECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEE
T ss_pred CCeECCCCEECCCCEECCCCEECCCCEECC-------CCEECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceE
Confidence 345666666666666666666666665552 36667777777777776557777777777766664 244
Q ss_pred EccCeEEccC
Q 020113 314 VLPHKEIKSS 323 (331)
Q Consensus 314 v~~~~~i~~~ 323 (331)
|++++.|+++
T Consensus 80 IG~~~~Ig~~ 89 (305)
T 3t57_A 80 IGCNNIIGHH 89 (305)
T ss_dssp ECSSCEECTT
T ss_pred ECCceEECCc
Confidence 4444444433
No 126
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=99.05 E-value=5.7e-10 Score=90.93 Aligned_cols=44 Identities=16% Similarity=0.256 Sum_probs=26.9
Q ss_pred CCEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEccCeEE
Q 020113 276 SSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLPHKEI 320 (331)
Q Consensus 276 ~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~~~~i 320 (331)
.++||++|+||.+|.|..+++||++|.||+++++... |.+++++
T Consensus 130 ~v~IGd~v~IG~~~~I~~gv~IG~~~vIgagsvV~~~-vp~~~vv 173 (185)
T 2p2o_A 130 PVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKD-VPANAVV 173 (185)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CeEEcCCeEECCCCEECCCCEECCCCEECCCCEECCC-CCCCcEE
Confidence 3566666666666666655666666666666666543 3344443
No 127
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.05 E-value=7.9e-10 Score=90.99 Aligned_cols=60 Identities=17% Similarity=0.088 Sum_probs=36.1
Q ss_pred ECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEc-CcEEccCeEEc
Q 020113 260 IGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSN-GAVVLPHKEIK 321 (331)
Q Consensus 260 i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~~~~~i~ 321 (331)
||+++.|+ .++.+.++.|+++|+||.+++|.+++.||++|.||+++.|. ++.|.+++++.
T Consensus 88 Ig~~~~i~--~~~~i~~~~Ig~~~~Ig~~~~I~~gv~IG~~~~IgagsvV~~~~~Ip~~svv~ 148 (194)
T 3tv0_A 88 IGTNNVFE--VGCYSQAMKMGDNNVIESKAYVGRNVILTSGCIIGACCNLNTFEVIPENTVIY 148 (194)
T ss_dssp ECSSCEEC--TTCEECCSEECSSCEECTTCEECTTEEECSSCEECTTCEECCCEEECTTEEEE
T ss_pred ECCcceEe--cceeEeeeeecccceecceeeECCeEEECCCCEECCCCEECCCcEECCCCEEE
Confidence 33444444 44555556666666666666666666667777777666664 45566665553
No 128
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.05 E-value=4.7e-10 Score=92.01 Aligned_cols=70 Identities=19% Similarity=0.227 Sum_probs=51.3
Q ss_pred ccCCCceEecceEEcC--CcEECCCcEECCCCCceEe-------------------CCEEcCCCEECCCcEEccceEECC
Q 020113 241 KLATGSNIIGNVLVHE--GAKIGDGCLIGPDKHACIS-------------------SSIIGWHSTVGRWARVENMTILGE 299 (331)
Q Consensus 241 ~i~~~~~i~~~~~i~~--~~~i~~~~~I~~~~~~~i~-------------------~s~i~~~~~ig~~~~i~~~~~i~~ 299 (331)
.|+++++|.++++|.+ ++.||++|.|+ +++.|. .++||++|+||.+|+|..++.||+
T Consensus 80 ~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig--~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 157 (190)
T 3hjj_A 80 HVGKSFFANFNCVILDVCEVRIGDHCMFA--PGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINPGVSIGD 157 (190)
T ss_dssp EECTTCEECTTCEEECSSCEEECTTCEEC--TTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEECTTCEECT
T ss_pred EECCceeeCCCeEEEeCCCeEECCceEEc--CCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEECCCCEECC
Confidence 3555566666666654 44677777777 566662 357888888888888888888888
Q ss_pred CcEECcccEEcCc
Q 020113 300 DVHVADEVYSNGA 312 (331)
Q Consensus 300 ~~~i~~~~~i~~~ 312 (331)
+|+||+++++.+.
T Consensus 158 ~~vIgagsvV~~d 170 (190)
T 3hjj_A 158 NAVIASGAVVTKD 170 (190)
T ss_dssp TCEECTTCEECSC
T ss_pred CCEECCCCEECcc
Confidence 8888888888755
No 129
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.04 E-value=7.2e-10 Score=95.87 Aligned_cols=62 Identities=16% Similarity=0.167 Sum_probs=36.8
Q ss_pred ccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEE
Q 020113 241 KLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYS 309 (331)
Q Consensus 241 ~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i 309 (331)
.|++++.|.+++.|++++.|+++|+|++ ++.||++|.|++++.|.+++.||++|.|++++.|
T Consensus 6 ~I~p~a~I~~~a~Ig~~v~I~~~~~I~~-------~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I 67 (266)
T 3r0s_A 6 KIHPSAVIEEGAQLGDDVVIEAYAYVSK-------DAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIV 67 (266)
T ss_dssp CBCTTCEECTTCEECTTCEECTTCEECT-------TCEECTTCEECTTCEECSSCEECTTCEECTTCEE
T ss_pred ccCCCCEECCCCEECCCCEECCCCEECC-------CCEECCCCEEcCCeEEeCCcEECCCcEEccCcee
Confidence 3556666666666655555555555552 3555666666666666655666666666666666
No 130
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.04 E-value=9.8e-10 Score=98.44 Aligned_cols=98 Identities=18% Similarity=0.271 Sum_probs=49.7
Q ss_pred EecCCHHHHHHHHHHHHhhhc-----cccCCccCCCceEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCC
Q 020113 215 MDIGQPKDYITGLRLYLDFLQ-----KNSSSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRW 288 (331)
Q Consensus 215 ~~i~t~~d~~~a~~~~l~~~~-----~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~ 288 (331)
.-+.+|...+.....++.... ..+++.+++++.|+++++|+++++|+++++|| +++.|. +++|+++|.||++
T Consensus 74 ~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~a~i~~~a~ig~~~~I~~~~~I~~~v~IG--~~~~I~~~~~Ig~~~~IG~~ 151 (341)
T 3eh0_A 74 LVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELG--DNVIIGAGCFVGKNSKIGAG 151 (341)
T ss_dssp EECSCHHHHHHHHHHHHCCCCCSCCSBCTTCEECTTCEECTTCEECTTCEECTTCEEC--TTCEECTTCEECTTCEECTT
T ss_pred EEeCCHHHHHHHHHHHhcccCCccCccCCCcEECCCcEECCCCEECCCcEECCCcEEC--CCcEECCCcEECCCCEECCC
Confidence 556677764444333333211 12233344444444444444455555555555 555553 4555555555555
Q ss_pred cEEccceEECCCcEECcccEEc-CcEE
Q 020113 289 ARVENMTILGEDVHVADEVYSN-GAVV 314 (331)
Q Consensus 289 ~~i~~~~~i~~~~~i~~~~~i~-~~~v 314 (331)
|.|..++.|+++++||++|.|. ++.+
T Consensus 152 ~~I~~~~~I~~~~~IG~~~~I~~g~~I 178 (341)
T 3eh0_A 152 SRLWANVTIYHEIQIGQNCLIQSGTVV 178 (341)
T ss_dssp CEECSSCEECTTCEECSSCEECTTCEE
T ss_pred cEECCCcEECCCCEECCccEEcCCcEE
Confidence 5555556666666666666663 4544
No 131
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.04 E-value=5.7e-10 Score=91.31 Aligned_cols=78 Identities=13% Similarity=0.147 Sum_probs=56.7
Q ss_pred ccCCCceEecceEEcC--CcEECCCcEECCCCCceE-------------------eCCEEcCCCEECCCcEEccceEECC
Q 020113 241 KLATGSNIIGNVLVHE--GAKIGDGCLIGPDKHACI-------------------SSSIIGWHSTVGRWARVENMTILGE 299 (331)
Q Consensus 241 ~i~~~~~i~~~~~i~~--~~~i~~~~~I~~~~~~~i-------------------~~s~i~~~~~ig~~~~i~~~~~i~~ 299 (331)
.|+++++|.++++|.+ .+.||++|.|+ +++.| ..++||++|+||.+|.|..+++||+
T Consensus 78 ~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig--~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 155 (188)
T 3srt_A 78 HVGENFFANYDCIFLDVCKIEIGDNVMLA--PNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGD 155 (188)
T ss_dssp EECTTEEECTTEEEECSSCEEECSSCEEC--TTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTTCEECS
T ss_pred EECCcccccCceEEecCCceEECCeeEEC--CCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCCcEECC
Confidence 4555555555555544 33778888888 66777 3578999999999999998899999
Q ss_pred CcEECcccEEcCcEEccCeEE
Q 020113 300 DVHVADEVYSNGAVVLPHKEI 320 (331)
Q Consensus 300 ~~~i~~~~~i~~~~v~~~~~i 320 (331)
+|.||+++++.+.+.....++
T Consensus 156 ~~vIgagsvV~~dvp~~~v~~ 176 (188)
T 3srt_A 156 NVVIGAGSVVTKDIPPNTVAV 176 (188)
T ss_dssp SEEECTTCEECSCBCSSEEEE
T ss_pred CCEECCCCEECcccCCCCEEE
Confidence 999999999986643333333
No 132
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.04 E-value=4.6e-10 Score=99.53 Aligned_cols=62 Identities=15% Similarity=0.238 Sum_probs=36.8
Q ss_pred CccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEEC
Q 020113 240 SKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVA 304 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~ 304 (331)
+.+++++.|.+++.|+++++||++|.|+ ++|.|.+|+|++++.|+++++|.+ ++|+++|.|+
T Consensus 66 a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig--~~~~I~~~~Ig~~~~I~~~s~I~~-s~I~~~~~I~ 127 (334)
T 2pig_A 66 AMAFAGTEITGNARITQPCTLYNNVRIG--DNVWIDRADISDGARISDNVTIQS-SSVREECAIY 127 (334)
T ss_dssp CEEETTCEECTTCEEESSCEEESSCEEC--TTCEEESCEEESSCEECTTCEEES-CEEESSEEEC
T ss_pred eEEcCCcEECCCcEEeeeeeECCCcEEC--CCCEEEeEEEcCCCEEeCCcEEec-cEEcCCeEEe
Confidence 3455566666666666666666666666 556666666666666666666655 4444444433
No 133
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.03 E-value=1.1e-09 Score=95.73 Aligned_cols=84 Identities=18% Similarity=0.198 Sum_probs=42.4
Q ss_pred CCccCCCceEecceEE--cCCcEECCCcEECCCCCceEeCCEEcCCCEECCCc-----------------EEccceEECC
Q 020113 239 SSKLATGSNIIGNVLV--HEGAKIGDGCLIGPDKHACISSSIIGWHSTVGRWA-----------------RVENMTILGE 299 (331)
Q Consensus 239 ~~~i~~~~~i~~~~~i--~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~-----------------~i~~~~~i~~ 299 (331)
...|++++.|+++++| +.+++||++|+|| ++ +.|+++|.||.++ +|+++|.||.
T Consensus 190 gv~I~p~a~IG~~v~I~hg~gvvIG~~~~IG--~~-----v~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGa 262 (310)
T 3f1x_A 190 GIDIHPGAQIGHHFTIDHGTGVVIGATSIIG--NN-----VKLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYS 262 (310)
T ss_dssp SCEECTTCEECSSCEEESCTTCEECTTCEEC--SS-----CEEETTCEEECC--------------CCSCEECTTCEECT
T ss_pred CcEECCCCEECCCcEECCCCCeEECCceEEc--CC-----CEECCCCEECCCccccccccccccCCCCCCEECCCcEEcC
Confidence 3456666666666666 5556666666666 33 4444444444444 3444444444
Q ss_pred CcEECcccEE-cCcEEccCeEEccCccCCcc
Q 020113 300 DVHVADEVYS-NGAVVLPHKEIKSSIVNPEI 329 (331)
Q Consensus 300 ~~~i~~~~~i-~~~~v~~~~~i~~~~~~~~~ 329 (331)
+++|..+++| .+++|+.+++|.+++...++
T Consensus 263 ga~Il~gv~IGd~a~IGagsvV~~dVp~~sv 293 (310)
T 3f1x_A 263 NATILGRVTIGKGATVGGNIWVTENVPAGSR 293 (310)
T ss_dssp TCEEESSCEECTTCEECSSCEECSCBCTTCE
T ss_pred CCEECCCcEECCCCEECCCCEECCccCCCcE
Confidence 4444444444 24555555555555554443
No 134
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.03 E-value=8.9e-10 Score=89.52 Aligned_cols=78 Identities=19% Similarity=0.207 Sum_probs=59.6
Q ss_pred ccCCCceEecceEEc--CCcEECCCcEECCCCCceEe-------------------CCEEcCCCEECCCcEEccceEECC
Q 020113 241 KLATGSNIIGNVLVH--EGAKIGDGCLIGPDKHACIS-------------------SSIIGWHSTVGRWARVENMTILGE 299 (331)
Q Consensus 241 ~i~~~~~i~~~~~i~--~~~~i~~~~~I~~~~~~~i~-------------------~s~i~~~~~ig~~~~i~~~~~i~~ 299 (331)
.|+++++|.++++|. .++.||++|.|+ +++.|. +++||++|+||.+|.|..++.||+
T Consensus 74 ~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig--~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~~gv~IG~ 151 (182)
T 1ocx_A 74 FLGNNFFANFDCVMLDVCPIRIGDNCMLA--PGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGD 151 (182)
T ss_dssp EECSSEEECSSEEEECSSCEEECTTCEEC--TTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTTCEECT
T ss_pred EECCCcEEeCCeEEEeccceEEcCCcEEe--CCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEECCCcEECC
Confidence 456666666666663 356778888888 667772 578999999999999988899999
Q ss_pred CcEECcccEEcCcEEccCeEEc
Q 020113 300 DVHVADEVYSNGAVVLPHKEIK 321 (331)
Q Consensus 300 ~~~i~~~~~i~~~~v~~~~~i~ 321 (331)
+|+||.++++.+. |.+++++.
T Consensus 152 ~~vIgagsvV~~d-ip~~~vv~ 172 (182)
T 1ocx_A 152 NVVVASGAVVTKD-VPDNVVVG 172 (182)
T ss_dssp TCEECTTCEECSC-BCSSEEEE
T ss_pred CCEECCCCEECCc-CCCCcEEE
Confidence 9999999999765 55665554
No 135
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=99.01 E-value=1.1e-09 Score=94.53 Aligned_cols=29 Identities=7% Similarity=0.355 Sum_probs=17.6
Q ss_pred CCccCCCceEecceEEc--CCcEECCCcEEC
Q 020113 239 SSKLATGSNIIGNVLVH--EGAKIGDGCLIG 267 (331)
Q Consensus 239 ~~~i~~~~~i~~~~~i~--~~~~i~~~~~I~ 267 (331)
...|++++.|+++++|+ .+++||++|+||
T Consensus 164 gi~I~p~a~IG~~v~I~hg~gvvIG~~~~IG 194 (287)
T 3mc4_A 164 QTDIHPAARLGSGLFLDHATGLVVGETAVVE 194 (287)
T ss_dssp CCEECTTCEECSSCEEESCTTCEECTTCEEC
T ss_pred CeEECCCCEECCCeEEccCCCeEECCCeEEC
Confidence 44566666666666665 455666666666
No 136
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.01 E-value=1.1e-09 Score=90.09 Aligned_cols=70 Identities=21% Similarity=0.221 Sum_probs=49.4
Q ss_pred ccCCCceEecceEEcC--CcEECCCcEECCCCCceEe-------------------CCEEcCCCEECCCcEEccceEECC
Q 020113 241 KLATGSNIIGNVLVHE--GAKIGDGCLIGPDKHACIS-------------------SSIIGWHSTVGRWARVENMTILGE 299 (331)
Q Consensus 241 ~i~~~~~i~~~~~i~~--~~~i~~~~~I~~~~~~~i~-------------------~s~i~~~~~ig~~~~i~~~~~i~~ 299 (331)
.|+++++|.++++|.+ .+.||++|.|+ +++.|. .++||++|+||.+|.|..++.||+
T Consensus 78 ~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig--~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 155 (195)
T 3nz2_A 78 RIGDHTFINMNVVMLDGAPITIGDHVLIG--PSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQGVTIGA 155 (195)
T ss_dssp EECTTCEECTTEEEECSSCEEECTTCEEC--TTCEEECEECCSSGGGTTTCCCEECCEEECTTCEECTTCEECTTCEECT
T ss_pred EECCCcEECcCCEEecCceEEECCCCEEC--CCCEEecCCCCcccccccccceecCCeEECCCCEEcCCCEECCCCEECC
Confidence 3555555555555532 34677777777 556542 357888888888888888888888
Q ss_pred CcEECcccEEcCc
Q 020113 300 DVHVADEVYSNGA 312 (331)
Q Consensus 300 ~~~i~~~~~i~~~ 312 (331)
+|+||+++++.+.
T Consensus 156 ~~vIgagsvV~~d 168 (195)
T 3nz2_A 156 RSVVAANSVVNQD 168 (195)
T ss_dssp TCEECTTCEECSC
T ss_pred CCEECCCCEEccc
Confidence 8888888888654
No 137
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.01 E-value=7.4e-10 Score=91.49 Aligned_cols=71 Identities=20% Similarity=0.216 Sum_probs=53.7
Q ss_pred CccCCCceEecceEEcC--CcEECCCcEECCCCCceEe-------------------CCEEcCCCEECCCcEEccceEEC
Q 020113 240 SKLATGSNIIGNVLVHE--GAKIGDGCLIGPDKHACIS-------------------SSIIGWHSTVGRWARVENMTILG 298 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~--~~~i~~~~~I~~~~~~~i~-------------------~s~i~~~~~ig~~~~i~~~~~i~ 298 (331)
..|+++++|+++++|.+ .+.||++|.|+ +++.|. .++||++|+||.+|.|..++.||
T Consensus 75 ~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig--~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG 152 (199)
T 3ftt_A 75 VKLGKNVYVNTNCYFMDGGQITIGDNVFIG--PNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIG 152 (199)
T ss_dssp EEECSSEEECTTEEEECSSCEEECSSEEEC--TTCEEECEECCSSHHHHHTTEEEECCEEECSSEEECTTCEECTTCEEC
T ss_pred cEECCCeEECCCeEEecCCEEEECCCCEEC--CCCEEecCCCcCccccccccceecCCeEEcCCcEEcCCCEECCCCEEC
Confidence 34566666666666643 36778888888 667772 34799999999999998889999
Q ss_pred CCcEECcccEEcCc
Q 020113 299 EDVHVADEVYSNGA 312 (331)
Q Consensus 299 ~~~~i~~~~~i~~~ 312 (331)
++|.||+++++.+.
T Consensus 153 ~~~vIgagsvV~~d 166 (199)
T 3ftt_A 153 EGSVIGAGSVVTKD 166 (199)
T ss_dssp TTCEECTTCEECSC
T ss_pred CCCEECCCCEECcc
Confidence 99999999998654
No 138
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.00 E-value=1.6e-09 Score=93.29 Aligned_cols=56 Identities=18% Similarity=0.268 Sum_probs=23.5
Q ss_pred cCCCceEecceEEcCCcEECCCcEECCC----CCceEe-CCEEcCCCEECCCcEEccceEE
Q 020113 242 LATGSNIIGNVLVHEGAKIGDGCLIGPD----KHACIS-SSIIGWHSTVGRWARVENMTIL 297 (331)
Q Consensus 242 i~~~~~i~~~~~i~~~~~i~~~~~I~~~----~~~~i~-~s~i~~~~~ig~~~~i~~~~~i 297 (331)
|++++.|.+++.|++++.|+++|.|+++ +++.|. +++|..++.||++|.|..+++|
T Consensus 3 I~p~a~I~~~a~ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~I 63 (259)
T 3hsq_A 3 IHPTAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVI 63 (259)
T ss_dssp BCTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEE
T ss_pred cCCCcEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEE
Confidence 3444444444444444444444444311 334442 3444444444444444444444
No 139
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=98.99 E-value=8.6e-10 Score=97.78 Aligned_cols=57 Identities=28% Similarity=0.234 Sum_probs=36.1
Q ss_pred CccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECC
Q 020113 240 SKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGE 299 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~ 299 (331)
..|++++.|+++++|+ +|+|++++.|+ ++++|.+++|+++|.|+.++.+.++|.|++
T Consensus 84 ~~Ig~~~~Ig~~~~I~-~~~Ig~~~~I~--~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~ 140 (334)
T 2pig_A 84 CTLYNNVRIGDNVWID-RADISDGARIS--DNVTIQSSSVREECAIYGDARVLNQSEILA 140 (334)
T ss_dssp CEEESSCEECTTCEEE-SCEEESSCEEC--TTCEEESCEEESSEEECTTCEEESSCEEEC
T ss_pred eeECCCcEECCCCEEE-eEEEcCCCEEe--CCcEEeccEEcCCeEEecCCEEeCCEEEee
Confidence 3445555555555554 55666666666 678888887777777777666665555433
No 140
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.98 E-value=1.8e-09 Score=87.99 Aligned_cols=82 Identities=17% Similarity=0.189 Sum_probs=61.6
Q ss_pred ccCCCceEecc--eEEcCCcEECCCcEECCCCCceEe---CCEEcCCCEECCCcEEc------------------cceEE
Q 020113 241 KLATGSNIIGN--VLVHEGAKIGDGCLIGPDKHACIS---SSIIGWHSTVGRWARVE------------------NMTIL 297 (331)
Q Consensus 241 ~i~~~~~i~~~--~~i~~~~~i~~~~~I~~~~~~~i~---~s~i~~~~~ig~~~~i~------------------~~~~i 297 (331)
.+++++.|.++ +.++.++.||+++.|+ .+++|. +.+||++|.||++|.|. ..++|
T Consensus 56 ~~g~~~~I~~p~~~~~g~~v~IG~~~~i~--~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~I 133 (185)
T 2p2o_A 56 STGERLFIEPNFRCDYGYNIHVGENFFMN--FDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVI 133 (185)
T ss_dssp BCCSCEEECSCEEESCSTTEEECTTEEEC--SSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEE
T ss_pred ccCCCcEEeccEEEEecCCEEECCeeEEc--CCeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEE
Confidence 36777888875 4456788888888888 678773 57899999999999883 24788
Q ss_pred CCCcEECcccEEc-CcEEccCeEEccCc
Q 020113 298 GEDVHVADEVYSN-GAVVLPHKEIKSSI 324 (331)
Q Consensus 298 ~~~~~i~~~~~i~-~~~v~~~~~i~~~~ 324 (331)
|++|.||.++.|. ++.|+++++|+++.
T Consensus 134 Gd~v~IG~~~~I~~gv~IG~~~vIgags 161 (185)
T 2p2o_A 134 GHNVWIGGRAVINPGVTIGDNAVIASGA 161 (185)
T ss_dssp CSSCEECTTCEECTTCEECTTCEECTTC
T ss_pred cCCeEECCCCEECCCCEECCCCEECCCC
Confidence 8888888888874 66666666666554
No 141
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.97 E-value=2.2e-09 Score=88.50 Aligned_cols=48 Identities=13% Similarity=0.086 Sum_probs=23.6
Q ss_pred cCCCceEecceE--EcCCcEECCCcEECCCCCceEeC---CEEcCCCEECCCcEE
Q 020113 242 LATGSNIIGNVL--VHEGAKIGDGCLIGPDKHACISS---SIIGWHSTVGRWARV 291 (331)
Q Consensus 242 i~~~~~i~~~~~--i~~~~~i~~~~~I~~~~~~~i~~---s~i~~~~~ig~~~~i 291 (331)
+++++.|.+++. ++.++.||++|.|+ .+++|.+ .+||++|.||++|.|
T Consensus 58 ig~~~~I~~~~~~~~g~~i~IG~~~~I~--~~~~i~~~~~i~IG~~v~Ig~~v~I 110 (203)
T 1krr_A 58 VGENAWVEPPVYFSYGSNIHIGRNFYAN--FNLTIVDDYTVTIGDNVLIAPNVTL 110 (203)
T ss_dssp CCSSCEECSCEEESCSTTEEECSSCEEC--SCEEEECSSCEEECSSCEECSSCEE
T ss_pred cCCCcEEcCCeEEEeCCCeEECCeeEEC--CccEEecccceEECCCCEECCCCEE
Confidence 455555555432 24455555555555 4444432 345555555555544
No 142
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.97 E-value=1.5e-09 Score=93.07 Aligned_cols=71 Identities=18% Similarity=0.221 Sum_probs=59.5
Q ss_pred CccCCCceEecceEEcC---CcEECCCcEECCCCCceEeCC--------------------EEcCCCEECCCcEEccceE
Q 020113 240 SKLATGSNIIGNVLVHE---GAKIGDGCLIGPDKHACISSS--------------------IIGWHSTVGRWARVENMTI 296 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~---~~~i~~~~~I~~~~~~~i~~s--------------------~i~~~~~ig~~~~i~~~~~ 296 (331)
..|++++.|+++++|.. ++.||++|.|| .++.|.++ +||++|.||.+|.|..+++
T Consensus 106 v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig--~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~ 183 (252)
T 3jqy_B 106 VIIGRRTTIGAGFEVVTDKCNVTIGHDCMIA--RDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVS 183 (252)
T ss_dssp EEECTTCEECTTCEEECSSSEEEECTTCEEC--SSEEEECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCE
T ss_pred EEECCCCEECCCcEEEeCCCCeEECCCCEEc--CCcEEecCCCcccccccccccccccCCeEEecCcEECCCCEECCCCE
Confidence 35778888888777766 77888888888 77777654 8999999999999999999
Q ss_pred ECCCcEECcccEEcCc
Q 020113 297 LGEDVHVADEVYSNGA 312 (331)
Q Consensus 297 i~~~~~i~~~~~i~~~ 312 (331)
||++|+||+++++.+.
T Consensus 184 IG~~~~IgagsvV~~~ 199 (252)
T 3jqy_B 184 VGSGSVIGYGSIVTKD 199 (252)
T ss_dssp ECTTCEECTTCEECSC
T ss_pred ECCCCEECCCCEECcc
Confidence 9999999999999643
No 143
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=98.97 E-value=1e-09 Score=102.51 Aligned_cols=77 Identities=22% Similarity=0.217 Sum_probs=60.8
Q ss_pred CccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEccCeE
Q 020113 240 SKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLPHKE 319 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~~~~ 319 (331)
..|++++.|+++++|+ ++.||++|.|+ +++.|.+++||++|.||++|+|..+++|+++++||+++.+.++.+++++.
T Consensus 287 ~~ig~~~~I~~~~~i~-~~~Ig~~~~I~--~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~i~~~~~ 363 (459)
T 4fce_A 287 VILGDRVRIGTGCVLK-NCVIGDDSEIS--PYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKKARLGKGSK 363 (459)
T ss_dssp EEECTTCEECTTCEEE-SCEECTTCEEC--SSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEEEEEECTTCE
T ss_pred eEECCCCEECCCCEEe-ccEECCCCEEC--CCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEeeeEEcCCCE
Confidence 4556666666666665 57777888888 78999899999999999999999779999999999988876665555543
No 144
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=98.95 E-value=2.7e-09 Score=96.86 Aligned_cols=61 Identities=25% Similarity=0.302 Sum_probs=26.9
Q ss_pred eEecceEEcCCcEECCCcEECCCCCceEe-CCEEcCCCEECCCcEEccceEECCCcEECcccEE
Q 020113 247 NIIGNVLVHEGAKIGDGCLIGPDKHACIS-SSIIGWHSTVGRWARVENMTILGEDVHVADEVYS 309 (331)
Q Consensus 247 ~i~~~~~i~~~~~i~~~~~I~~~~~~~i~-~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i 309 (331)
.|++++.|+++++|+++|.|| +++.|. +++|+++|.||++|.|..+++|+.+++||++|.|
T Consensus 138 ~Ig~~~~I~~~~~I~~~~~IG--~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I 199 (374)
T 2iu8_A 138 IIEDHVCIEPYAVVCQHAHVG--SACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVII 199 (374)
T ss_dssp EECTTCEECTTCEECTTCEEC--TTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTTCEE
T ss_pred EECCCCEECCCCEECCCCEEC--CCCEECCCcEECCCcEECCceeeCCCcEEcccceECCCCEE
Confidence 333333333334444444444 444443 3444444444444444433444444444444444
No 145
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.94 E-value=2.7e-09 Score=89.24 Aligned_cols=83 Identities=18% Similarity=0.198 Sum_probs=53.1
Q ss_pred CccCCCceEecceEEcC---CcEECCCcEECCCCCceE----eCCEEcCCCEECCCcEEccc------------------
Q 020113 240 SKLATGSNIIGNVLVHE---GAKIGDGCLIGPDKHACI----SSSIIGWHSTVGRWARVENM------------------ 294 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~---~~~i~~~~~I~~~~~~~i----~~s~i~~~~~ig~~~~i~~~------------------ 294 (331)
..|++++.|++++++.. ++.||++|.|+ +.+.+ .+++||++|.||++|+|.+.
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig--~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~ 136 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMG--NGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGK 136 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEEC--SEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCC
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEEC--CEEEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCC
Confidence 45677777777666652 37777777777 53444 35677777777777777752
Q ss_pred -eEECCCcEECcccEEc-CcEEccCeEEccCc
Q 020113 295 -TILGEDVHVADEVYSN-GAVVLPHKEIKSSI 324 (331)
Q Consensus 295 -~~i~~~~~i~~~~~i~-~~~v~~~~~i~~~~ 324 (331)
++||++|.||.+++|. ++.|+++++|+++.
T Consensus 137 ~v~Igd~v~IG~~~~I~~gv~Ig~~~vIgags 168 (215)
T 2wlg_A 137 DVIIGNHVWLGRNVTILKGVCIPNNVVVGSHT 168 (215)
T ss_dssp CEEECTTCEECTTCEECTTCEECSSCEECTTC
T ss_pred CeEECCCcEECCCCEECCCCEECCCCEECCCC
Confidence 4677777777777663 55555555555443
No 146
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.92 E-value=3.5e-09 Score=90.64 Aligned_cols=26 Identities=12% Similarity=0.327 Sum_probs=22.8
Q ss_pred cEE--EEeCCeeccccHHHHHHHHhhcC
Q 020113 104 PFF--VLNSDVISEYPLKQMIEFHRGRG 129 (331)
Q Consensus 104 ~~l--v~~~D~i~~~~l~~~l~~~~~~~ 129 (331)
|+| ++.+|.+...+|.+++.+|...+
T Consensus 21 P~L~~~l~~~IL~~~~l~~aLa~~la~k 48 (267)
T 1ssq_A 21 PMLASFFHSTILKHQNLGGALSYLLANK 48 (267)
T ss_dssp HHHHHHHHHHTTTSSSHHHHHHHHHHHH
T ss_pred CHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 888 89999999999999999987654
No 147
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.92 E-value=1.4e-09 Score=91.31 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=29.3
Q ss_pred CCEEcCCCEECCCcEEccceEECCCcEECcccEEcCc
Q 020113 276 SSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGA 312 (331)
Q Consensus 276 ~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~ 312 (331)
+++||++|.||.+|.|.+++.||++|+||++++|...
T Consensus 119 ~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~d 155 (220)
T 4hur_A 119 DIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKN 155 (220)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred CeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEccc
Confidence 4668888888888888877888888888888888643
No 148
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.92 E-value=2.4e-09 Score=101.15 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=21.1
Q ss_pred CCceEeCCEEcCCCEECCCcEEcc-------ceEECCCcEECcccEE
Q 020113 270 KHACISSSIIGWHSTVGRWARVEN-------MTILGEDVHVADEVYS 309 (331)
Q Consensus 270 ~~~~i~~s~i~~~~~ig~~~~i~~-------~~~i~~~~~i~~~~~i 309 (331)
+.+.+.+|+||++|.||.+|.+.+ .++||++|+||.++.|
T Consensus 380 ~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l 426 (501)
T 3st8_A 380 HLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMF 426 (501)
T ss_dssp ESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEE
T ss_pred ccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEE
Confidence 334444455555555555555433 2555566666555554
No 149
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=98.91 E-value=2.7e-09 Score=99.90 Aligned_cols=59 Identities=27% Similarity=0.425 Sum_probs=42.5
Q ss_pred cEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEccCeE
Q 020113 258 AKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLPHKE 319 (331)
Q Consensus 258 ~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~~~~ 319 (331)
+.||++|.|+ ++.|.+++||++|.||+++.|..+++||++|.||+++.+.+++|++++.
T Consensus 310 ~~ig~~~~i~---~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~Ig~~~~ 368 (468)
T 1hm9_A 310 STIGAGAVIT---NSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTK 368 (468)
T ss_dssp CEECTTCEEC---SCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESCEECTTCE
T ss_pred cEEeCCcEEE---EEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeeeEEcCCcE
Confidence 3344444443 3556678899999999999998669999988888888877666655544
No 150
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.90 E-value=5.1e-09 Score=86.35 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=50.0
Q ss_pred ccCCCceEecceEEcC--CcEECCCcEECCCCCceEe-------------------CCEEcCCCEECCCcEEccceEECC
Q 020113 241 KLATGSNIIGNVLVHE--GAKIGDGCLIGPDKHACIS-------------------SSIIGWHSTVGRWARVENMTILGE 299 (331)
Q Consensus 241 ~i~~~~~i~~~~~i~~--~~~i~~~~~I~~~~~~~i~-------------------~s~i~~~~~ig~~~~i~~~~~i~~ 299 (331)
.|+++++|..+++|.. .+.||++|.|+ .++.|. .++||++|+||.+|.|..++.||+
T Consensus 77 ~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig--~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~ 154 (203)
T 1krr_A 77 HIGRNFYANFNLTIVDDYTVTIGDNVLIA--PNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGD 154 (203)
T ss_dssp EECSSCEECSCEEEECSSCEEECSSCEEC--SSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECTTCEECT
T ss_pred EECCeeEECCccEEecccceEECCCCEEC--CCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEeCCeEECC
Confidence 3455555554444432 25677777777 555542 468999999999999998899999
Q ss_pred CcEECcccEEcCc
Q 020113 300 DVHVADEVYSNGA 312 (331)
Q Consensus 300 ~~~i~~~~~i~~~ 312 (331)
+|+||+++++...
T Consensus 155 ~~vIgagsvV~~d 167 (203)
T 1krr_A 155 NSVIGAGSIVTKD 167 (203)
T ss_dssp TCEECTTCEECSC
T ss_pred CCEECCCCEECCC
Confidence 9999999998654
No 151
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=98.90 E-value=1.9e-09 Score=100.53 Aligned_cols=74 Identities=22% Similarity=0.285 Sum_probs=56.3
Q ss_pred ccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEccC
Q 020113 241 KLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLPH 317 (331)
Q Consensus 241 ~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~~ 317 (331)
.|++++.|+++++|. ++.||++|.|+ +++.|.+++||++|.||++++|..+++||++|.||+++.+.++.++++
T Consensus 285 ~Ig~~~~I~~~~~i~-~~~ig~~~~I~--~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~~~~i~~~ 358 (456)
T 2v0h_A 285 KLGDRVKIGTGCVLK-NVVIGNDVEIK--PYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKKSTVGKG 358 (456)
T ss_dssp EECTTCEECTTCEEE-EEEECTTCEEC--SSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEESCEECTT
T ss_pred EECCCCEECCCCEEE-eEEEeCCCEEc--CCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEeccEECCC
Confidence 345555555555554 55567777788 778888899999999999999997799999999999888865554444
No 152
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.87 E-value=7.4e-09 Score=86.34 Aligned_cols=43 Identities=21% Similarity=0.229 Sum_probs=34.3
Q ss_pred CCEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEccCeE
Q 020113 276 SSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLPHKE 319 (331)
Q Consensus 276 ~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~~~~ 319 (331)
+++||++|.||.+|.|.+++.||++|+||.++++... |.++++
T Consensus 111 ~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~~d-Vp~~~v 153 (212)
T 3eev_A 111 DTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTKD-VAPYEV 153 (212)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEE
T ss_pred CeEECCCCEECCCCEEcCCCEECCCCEECCCCEEccc-cCCCcE
Confidence 4789999999999999988999999999999998643 334433
No 153
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.87 E-value=6.6e-09 Score=89.77 Aligned_cols=26 Identities=8% Similarity=0.281 Sum_probs=23.2
Q ss_pred cEE--EEeCCeeccccHHHHHHHHhhcC
Q 020113 104 PFF--VLNSDVISEYPLKQMIEFHRGRG 129 (331)
Q Consensus 104 ~~l--v~~~D~i~~~~l~~~l~~~~~~~ 129 (331)
|+| ++++|.+...+|.+++.++...+
T Consensus 41 P~L~~~l~~~IL~~~~l~~aLa~~La~k 68 (289)
T 1t3d_A 41 PMLASFYHATLLKHENLGSALSYMLANK 68 (289)
T ss_dssp GGGHHHHHHHTTTCSSHHHHHHHHHHHH
T ss_pred CHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 899 99999999999999999987655
No 154
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.84 E-value=2.9e-09 Score=92.44 Aligned_cols=25 Identities=32% Similarity=0.458 Sum_probs=10.6
Q ss_pred CCCceEecceEEcCCcEECCCcEEC
Q 020113 243 ATGSNIIGNVLVHEGAKIGDGCLIG 267 (331)
Q Consensus 243 ~~~~~i~~~~~i~~~~~i~~~~~I~ 267 (331)
++++.|+|.++|+.++.||++|+|+
T Consensus 182 ~~gv~I~P~AvI~~GA~IGeGv~Ig 206 (347)
T 3r5d_A 182 PAGVRIADTARVRLGAYIGEGTTVM 206 (347)
T ss_dssp CTTEEESSGGGBBTTEEECTTEEEC
T ss_pred cCCcEECCcCEECCCCEECCCCEEC
Confidence 3444444444444444444444444
No 155
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.83 E-value=5.5e-09 Score=96.42 Aligned_cols=73 Identities=14% Similarity=0.190 Sum_probs=61.2
Q ss_pred CCccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEcc
Q 020113 239 SSKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLP 316 (331)
Q Consensus 239 ~~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~ 316 (331)
...|+++|+| +++.|+ +|+||++|.|| ++|.|.+|+|+++|.||++|.|.+ |+||++|.||++++|.+....|
T Consensus 324 ~~~ig~~~~I-~~~~i~-~~~ig~~~~I~--~~~~i~~~~i~~~~~i~~~~~i~~-~~ig~~~~i~~~~~i~~~~~~~ 396 (420)
T 3brk_X 324 SSVVSGDCII-SGAALN-RSLLFTGVRAN--SYSRLENAVVLPSVKIGRHAQLSN-VVIDHGVVIPEGLIVGEDPELD 396 (420)
T ss_dssp SCEECSSCEE-ESCEEE-SCEECTTCEEC--TTCEEEEEEECTTCEECTTCEEEE-EEECTTCEECTTCEESSCHHHH
T ss_pred CCEECCCCEE-cCCEEe-CcEEcCCCEEC--CCCEEcceEEcCCCEECCCCEEec-eEECCCCEECCCCEEeCCCCCC
Confidence 3455666666 566664 69999999999 889999999999999999999998 9999999999999997554433
No 156
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.83 E-value=1.4e-08 Score=94.54 Aligned_cols=67 Identities=19% Similarity=0.290 Sum_probs=56.9
Q ss_pred CccCCCceEecceEEcCCcEECCCcEECCCCCceEeCCEEcCC-------------------CEECCCcEEccceEECCC
Q 020113 240 SKLATGSNIIGNVLVHEGAKIGDGCLIGPDKHACISSSIIGWH-------------------STVGRWARVENMTILGED 300 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~~~~~i~~~~~I~~~~~~~i~~s~i~~~-------------------~~ig~~~~i~~~~~i~~~ 300 (331)
..|+++|.|.+ +.|. +++||++|.|| ++++|.++++..+ +.||.+|.|.+ ++||++
T Consensus 331 ~~Ig~~~~I~~-~~i~-~~~Ig~~~~Ig--~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~-~~Ig~~ 405 (451)
T 1yp2_A 331 SVIGEGCVIKN-CKIH-HSVVGLRSCIS--EGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKR-AIIDKN 405 (451)
T ss_dssp EEECTTCEEEE-EEEE-SCEECTTCEEC--TTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEES-EEECTT
T ss_pred eEECCCCEEcc-eEEe-ccEECCCCEEC--CCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEec-cEeCCC
Confidence 45667777765 6666 89999999999 8899998888777 99999999988 999999
Q ss_pred cEECcccEEcC
Q 020113 301 VHVADEVYSNG 311 (331)
Q Consensus 301 ~~i~~~~~i~~ 311 (331)
|.||+|++|.+
T Consensus 406 ~~IG~~~~i~~ 416 (451)
T 1yp2_A 406 ARIGDNVKIIN 416 (451)
T ss_dssp CEECTTCEECC
T ss_pred cEECCCCEEeC
Confidence 99999999864
No 157
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.79 E-value=1.4e-08 Score=87.58 Aligned_cols=49 Identities=29% Similarity=0.427 Sum_probs=39.1
Q ss_pred cEECCCcEECCCCCceEeC---------CEEcCCCEECCCcEEccceEECCCcEECcccEEc
Q 020113 258 AKIGDGCLIGPDKHACISS---------SIIGWHSTVGRWARVENMTILGEDVHVADEVYSN 310 (331)
Q Consensus 258 ~~i~~~~~I~~~~~~~i~~---------s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~ 310 (331)
+.||++|.|+ .+++|.. ++||++|.||.+++| + +.||++|+||+|++|.
T Consensus 208 v~IGd~v~Ig--pGa~IgG~~~~~~~~~V~IGDnv~IGanAtI-g-VtIGd~~iIGAGSVVt 265 (332)
T 3fsy_A 208 VVVGDGSDVG--GGASIMGTLSGGGTHVISIGKRCLLGANSGL-G-ISLGDDCVVEAGLYVT 265 (332)
T ss_dssp CEECTTCEEC--TTCEECSBCC---CCBCEECTTCEECTTCEE-C-SCBCSSCEECTTCEEC
T ss_pred eEECCCCEEC--CCCEEcCCCCCCCccceEECCCCEECCCCEE-e-eEECCCCEECCCCEEC
Confidence 4677777777 6677753 888888888888888 5 8888888888888884
No 158
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.78 E-value=1.6e-08 Score=84.74 Aligned_cols=30 Identities=20% Similarity=0.229 Sum_probs=17.6
Q ss_pred eEECCCcEECcccEEc-CcEEccCeEEccCc
Q 020113 295 TILGEDVHVADEVYSN-GAVVLPHKEIKSSI 324 (331)
Q Consensus 295 ~~i~~~~~i~~~~~i~-~~~v~~~~~i~~~~ 324 (331)
++||++|.||.+|+|. ++.|+++++|+++.
T Consensus 120 v~IG~~v~IG~~a~I~~gv~IG~gavIgags 150 (220)
T 4hur_A 120 IEIGNDVWIGRDVTIMPGVKIGDGAIIAAEA 150 (220)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTC
T ss_pred eEECCCcEECCCCEEeCCCEECCCCEEcCCC
Confidence 6677777777666663 45555555555443
No 159
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.73 E-value=2.5e-08 Score=83.33 Aligned_cols=71 Identities=17% Similarity=0.233 Sum_probs=56.9
Q ss_pred CccCCCceEecceEEc---CCcEECCCcEECCCCCceEeC--------------------CEEcCCCEECCCcEEccceE
Q 020113 240 SKLATGSNIIGNVLVH---EGAKIGDGCLIGPDKHACISS--------------------SIIGWHSTVGRWARVENMTI 296 (331)
Q Consensus 240 ~~i~~~~~i~~~~~i~---~~~~i~~~~~I~~~~~~~i~~--------------------s~i~~~~~ig~~~~i~~~~~ 296 (331)
..|++++.|++.+++. .++.||++|.|+ .++.|.+ ++||++|+||.++.|..++.
T Consensus 80 ~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig--~~~~I~~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~gv~ 157 (215)
T 2wlg_A 80 LQIQAKTTMGNGEITIAEKGKISIGKDCMLA--HGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVC 157 (215)
T ss_dssp EEECTTCEECSEEEEECTTCEEEECTTCEEC--TTEEEESCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTTCE
T ss_pred EEEcCCCEECCEEEEEeCCCCEEECCCCEEc--CCEEEECCCCcccccccccccccCCCCeEECCCcEECCCCEECCCCE
Confidence 4677888887755543 467788888888 6677764 48999999999999998899
Q ss_pred ECCCcEECcccEEcCc
Q 020113 297 LGEDVHVADEVYSNGA 312 (331)
Q Consensus 297 i~~~~~i~~~~~i~~~ 312 (331)
||++|.|++++++...
T Consensus 158 Ig~~~vIgagsvV~~~ 173 (215)
T 2wlg_A 158 IPNNVVVGSHTVLYKS 173 (215)
T ss_dssp ECSSCEECTTCEECSC
T ss_pred ECCCCEECCCCEEcCc
Confidence 9999999999999743
No 160
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.73 E-value=8.5e-08 Score=88.65 Aligned_cols=305 Identities=13% Similarity=0.167 Sum_probs=165.0
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeC-CcchHHHHHHHHHHc----C--CCEEEEEeccChHHHHHHHHHhhhccCeE
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFA-NKPMILHQIEALKAV----G--VTEVVLAINYQPEVMLNFLKEFEKKLEIK 74 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~-g~pli~~~l~~l~~~----g--i~~i~iv~~~~~~~i~~~~~~~~~~~~~~ 74 (331)
.+|+||||.|+||+- ..||.++|+. |+++++..++++.+. | +..+++.+....+.+++++++. ..++..
T Consensus 129 avvlLaGGlGTRLG~---~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~-~~fg~~ 204 (528)
T 3r3i_A 129 VVVKLNGGLGTSMGC---KGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKY-NHCRVK 204 (528)
T ss_dssp EEEEECCCBCTTTTC---SSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGG-TTSSCC
T ss_pred EEEEeCCCCccccCC---CCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhc-CccCCC
Confidence 468889999999976 7899999995 899999999988865 3 6666776667778899988873 223333
Q ss_pred EEEeeC---------------------------CcccCChH--HHHH---HHhhccCCCCCcEEEEeCCeeccccHHHHH
Q 020113 75 ITCSQE---------------------------TEPLGTAG--PLAL---ARDKLIDDSGEPFFVLNSDVISEYPLKQMI 122 (331)
Q Consensus 75 v~~~~~---------------------------~~~~G~~~--al~~---~~~~~~~~~~~~~lv~~~D~i~~~~l~~~l 122 (331)
+.+..| ..|.|.++ ..+. .++.+....-+++.+.+.|.+....-..++
T Consensus 205 V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~vDp~~L 284 (528)
T 3r3i_A 205 IYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVDLYIL 284 (528)
T ss_dssp EEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCCCHHHH
T ss_pred eEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccccCHHHH
Confidence 333222 12445443 3222 233333333348999999996433233456
Q ss_pred HHHhhc----CCceEEE----ecCCCCceEEEEcCCcCceeEeeecCCCC--------CCCeEEEEEEEEChhhHhhcc-
Q 020113 123 EFHRGR----GGEASIM----VDEPSKYGVVVMEETTGKVEKFVEKPKNF--------VGNKINAGIYLLNPSVLDRIE- 185 (331)
Q Consensus 123 ~~~~~~----~~~~~i~----~~~~~~~~~v~~d~~~~~v~~~~ek~~~~--------~~~~~~~Giy~~~~~~l~~l~- 185 (331)
..+.+. ++++.+- ......-|.+...+..-.+.++.|-|++. .-.+.++....|+-+.++.+.
T Consensus 285 g~~~~~~~~~~~d~~~kVv~Kt~~dek~Gvl~~~dGk~~vvEyseip~e~~~~~~g~~~f~~~Ntnnlw~~L~~L~~v~~ 364 (528)
T 3r3i_A 285 NHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWISLAAVKRLQE 364 (528)
T ss_dssp HHHSSCSSSCCCSEEEEECCCCTTCCSSCEEECSSSSCEEECTTSSCGGGTTTSSCSSSCCCCEEEEEEEEHHHHHHHHH
T ss_pred HHHHhcccccCCcEEEEEeEccccCCcccEEEEECCeEEEEEecCCChhHhhccCCcccCCeEEEEEEEEEHHHHHHHHH
Confidence 666665 6676654 12223445555433213455555443321 113578889999988876551
Q ss_pred cCCC------------------Cccc---chHHHHHhcCcEEEEEe-CceEEecCCHHHHHHHHHHHHhhhccccCCccC
Q 020113 186 LKPT------------------SIEK---EVFPEIAAENKLFAMVL-PGFWMDIGQPKDYITGLRLYLDFLQKNSSSKLA 243 (331)
Q Consensus 186 ~~~~------------------~~~~---~~l~~l~~~~~i~~~~~-~~~~~~i~t~~d~~~a~~~~l~~~~~~~~~~i~ 243 (331)
.... .+|. ++++.. .+..++.+ ...|..+-+..|++.....+..-.. ......
T Consensus 365 ~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f---~~~~~i~VpR~rF~PvKn~sdLll~~Sdly~l~~--g~l~~~ 439 (528)
T 3r3i_A 365 QNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSF---ENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNA--GSLTMS 439 (528)
T ss_dssp TTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTS---SSCCCEECCGGGCCBCCSHHHHHHHHSTTSEEET--TEEECC
T ss_pred hCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhc---cCcEEEEEehHHcccccchHHHHHHhcceeEeeC--CeEEec
Confidence 1100 0111 111111 12223333 2238888999988866543221110 000000
Q ss_pred CCc--eEecceEEcCCcEECCCcEECCC------CCceEe--CCEEcCCCEECCCcEEccceEE----CCCcEECcccEE
Q 020113 244 TGS--NIIGNVLVHEGAKIGDGCLIGPD------KHACIS--SSIIGWHSTVGRWARVENMTIL----GEDVHVADEVYS 309 (331)
Q Consensus 244 ~~~--~i~~~~~i~~~~~i~~~~~I~~~------~~~~i~--~s~i~~~~~ig~~~~i~~~~~i----~~~~~i~~~~~i 309 (331)
+.. -.-|-+.+++. ...|... --+.++ .-+|..+++.|.++++.+.++| |+...|-+|+++
T Consensus 440 ~~r~~~~~P~v~L~~~-----~~~v~~f~~rf~~iP~l~~~~~LtV~Gdv~fg~~v~l~G~v~i~~~~g~~~~ip~g~~l 514 (528)
T 3r3i_A 440 EKREFPTVPLVKLGSS-----FTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVL 514 (528)
T ss_dssp SSCSSCCCCEEEECTT-----SCSHHHHHHHCSSCCEEEEEEEEEEESEEECCTTCEEEEEEEEECCTTCEEECCTTCEE
T ss_pred ccccCCCCCEEEeCcc-----cCcHHHHHHhCCCCCCcccCCEEEEecceEECCCcEEEEEEEEEcCCCCceecCCCCEE
Confidence 100 01122333221 0111000 011222 3456777888888888886777 455789999999
Q ss_pred cCcEEccCeEE
Q 020113 310 NGAVVLPHKEI 320 (331)
Q Consensus 310 ~~~~v~~~~~i 320 (331)
.|.+|.++..|
T Consensus 515 en~~v~g~~~~ 525 (528)
T 3r3i_A 515 ENKIVSGNLRI 525 (528)
T ss_dssp EEEEEC-----
T ss_pred eccEEeccccc
Confidence 99988877655
No 161
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.58 E-value=1.2e-07 Score=84.78 Aligned_cols=57 Identities=23% Similarity=0.316 Sum_probs=40.0
Q ss_pred cCCcEECCCcEECCCCCce----EeC-----CEEcCCCEECCCcEEccceEECCCcEECcccEEc-CcEEc
Q 020113 255 HEGAKIGDGCLIGPDKHAC----ISS-----SIIGWHSTVGRWARVENMTILGEDVHVADEVYSN-GAVVL 315 (331)
Q Consensus 255 ~~~~~i~~~~~I~~~~~~~----i~~-----s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~-~~~v~ 315 (331)
+.+++||++|.|+ .++. +.+ ++||++|.||.+|. .+ +.||++|+||++++|. ++.+.
T Consensus 262 g~~vvIGdnv~Ig--~ga~I~g~l~g~~~~~VvIGdnv~IGagAv-~G-V~IGdgavIGAGsVVt~dv~i~ 328 (387)
T 2rij_A 262 SSSAIVGEGSDVG--GGASILGVLSGTSGNAISVGKACLLGANSV-TG-IPLGDNCIVDAGIAVLEGTKFL 328 (387)
T ss_dssp CTTCEECTTCEEC--TTCEECCBCSSTTCCBCEECTTCEECTTCE-EC-SCBCTTCEECTTCEECTTCEEE
T ss_pred CCCCEECCCCEEC--CCceEcceecCCCccCeEEeCCCEECCCCc-CC-cEECCCCEECCCCEECCCceee
Confidence 3455566666666 5564 333 68888888888888 44 8888888888888885 44444
No 162
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.57 E-value=2.5e-07 Score=77.15 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=27.5
Q ss_pred CCEEcCCCEECCCcEEccceEECCCcEECcccEEcC
Q 020113 276 SSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNG 311 (331)
Q Consensus 276 ~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~ 311 (331)
+++||++|.||.++.|.+++.||++++||.++.+..
T Consensus 118 ~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~ 153 (219)
T 4e8l_A 118 DIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTK 153 (219)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CcEECCCeEECCCCEEcCCCEECCCCEECCCCEEcc
Confidence 467777788888877777777888888888777754
No 163
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.54 E-value=3.1e-07 Score=76.07 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=27.9
Q ss_pred CCEEcCCCEECCCcEEccceEECCCcEECcccEEcCc
Q 020113 276 SSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGA 312 (331)
Q Consensus 276 ~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~ 312 (331)
+++||++|.||.++.|.+++.||+++.||.++.+...
T Consensus 113 ~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~~~ 149 (209)
T 1mr7_A 113 DTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKD 149 (209)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred CcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEcCC
Confidence 3667888888888888777888888888888877643
No 164
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.52 E-value=3.3e-07 Score=76.30 Aligned_cols=44 Identities=11% Similarity=0.163 Sum_probs=23.8
Q ss_pred ECCCcEEccceEECCCcEECcccEE-cCcEEccCeEEccCccCCc
Q 020113 285 VGRWARVENMTILGEDVHVADEVYS-NGAVVLPHKEIKSSIVNPE 328 (331)
Q Consensus 285 ig~~~~i~~~~~i~~~~~i~~~~~i-~~~~v~~~~~i~~~~~~~~ 328 (331)
++..++|+++|.||.+++|..+++| .+|+|+.++++..++...+
T Consensus 108 ~~g~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~~dVp~~~ 152 (212)
T 3eev_A 108 RSGDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTKDVAPYE 152 (212)
T ss_dssp CCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTE
T ss_pred cCCCeEECCCCEECCCCEEcCCCEECCCCEECCCCEEccccCCCc
Confidence 3344455555555555555555555 3566666666666655433
No 165
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.44 E-value=8e-07 Score=73.66 Aligned_cols=43 Identities=19% Similarity=0.217 Sum_probs=32.6
Q ss_pred CCEEcCCCEECCCcEEccceEECCCcEECcccEEcCcEEccCeE
Q 020113 276 SSIIGWHSTVGRWARVENMTILGEDVHVADEVYSNGAVVLPHKE 319 (331)
Q Consensus 276 ~s~i~~~~~ig~~~~i~~~~~i~~~~~i~~~~~i~~~~v~~~~~ 319 (331)
.++||++|.||.+|.|..++.||++|+||.++++... |.++++
T Consensus 110 ~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~~-vp~~~~ 152 (212)
T 1xat_A 110 DTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTGD-VEPYAI 152 (212)
T ss_dssp CEEECTTCEECTTCEECTTCEECTTCEECTTCEECSC-BCTTEE
T ss_pred CeEECCCCEECCCCEEeCCCEECCCCEECCCCEEccc-CCCCcE
Confidence 4778888888888888878888888888888888653 334433
No 166
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.41 E-value=6.5e-07 Score=74.62 Aligned_cols=28 Identities=21% Similarity=0.252 Sum_probs=14.1
Q ss_pred eEECCCcEECcccEEc-CcEEccCeEEcc
Q 020113 295 TILGEDVHVADEVYSN-GAVVLPHKEIKS 322 (331)
Q Consensus 295 ~~i~~~~~i~~~~~i~-~~~v~~~~~i~~ 322 (331)
++||++|.||.++.|. ++.|+++++|++
T Consensus 119 v~Igd~v~IG~~a~I~~gv~IG~~~~Iga 147 (219)
T 4e8l_A 119 IEIGNDVWIGRDVTIMPGVKIGDGAIIAA 147 (219)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECT
T ss_pred cEECCCeEECCCCEEcCCCEECCCCEECC
Confidence 5555555555555553 344444444443
No 167
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.38 E-value=4.2e-06 Score=76.79 Aligned_cols=301 Identities=14% Similarity=0.121 Sum_probs=162.3
Q ss_pred EEEEeCCCCcccCCCCCCCCCCCcee-CCcchHHHHHHHHHHc------CCCEEEEEeccChHHHHHHHHHhhhccCe--
Q 020113 3 ALILVGGFGTRLRPLTLSVPKPLVDF-ANKPMILHQIEALKAV------GVTEVVLAINYQPEVMLNFLKEFEKKLEI-- 73 (331)
Q Consensus 3 avIlA~G~g~rl~plt~~~pK~llpi-~g~pli~~~l~~l~~~------gi~~i~iv~~~~~~~i~~~~~~~~~~~~~-- 73 (331)
+|+||||.|+||+- ..||.++|+ .|+++++..++++... .+--+++.+....+.+++++++.. .++.
T Consensus 79 vvlLaGGlGTRLG~---~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~-~Fgl~~ 154 (484)
T 3gue_A 79 VLKLNGGLGTGMGL---NGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYP-TLYEVF 154 (484)
T ss_dssp EEEEECCCCGGGTC---SSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCH-HHHTTC
T ss_pred EEEEcCCcccccCC---CCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCc-ccCCCc
Confidence 67889999999976 679999999 7889999999887753 355666666666788999998721 1111
Q ss_pred -EEEEeeC-----------------------CcccCChHH--HHH---HHhhccCCCCCcEEEEeCCeeccccHHHHHHH
Q 020113 74 -KITCSQE-----------------------TEPLGTAGP--LAL---ARDKLIDDSGEPFFVLNSDVISEYPLKQMIEF 124 (331)
Q Consensus 74 -~v~~~~~-----------------------~~~~G~~~a--l~~---~~~~~~~~~~~~~lv~~~D~i~~~~l~~~l~~ 124 (331)
.+.+..| ..|.|.++- .+. .++.+....-+++.+.+.|.+...--..++..
T Consensus 155 ~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~~lG~ 234 (484)
T 3gue_A 155 DSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVRLLDY 234 (484)
T ss_dssp CCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHHHHHH
T ss_pred cceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHHHHHH
Confidence 1111111 123455442 221 23333333333899999999654333567788
Q ss_pred HhhcCCceEEE-e--cC-CCCceEEEEc---------CCcCc--eeEeeecCCC--------CCCCeEEEEEEEEChhhH
Q 020113 125 HRGRGGEASIM-V--DE-PSKYGVVVME---------ETTGK--VEKFVEKPKN--------FVGNKINAGIYLLNPSVL 181 (331)
Q Consensus 125 ~~~~~~~~~i~-~--~~-~~~~~~v~~d---------~~~~~--v~~~~ek~~~--------~~~~~~~~Giy~~~~~~l 181 (331)
+.++++++.+- + .+ ...-|.+... .+ |+ +.++.|-|.+ ....+.+++-..++-..+
T Consensus 235 ~~~~~~d~~~kvv~Kt~~dekgG~l~~~~~~~~~~~~~d-G~~~vvEyseip~e~~~~f~~~~g~~~FNtnNi~~~l~~l 313 (484)
T 3gue_A 235 MHEKQLGFLMEVCRRTESDKKGGHLAYKDVIDETTGQTR-RRFVLRESAQCPKEDEDSFQNIAKHCFFNTNNIWINLMEL 313 (484)
T ss_dssp HHHTTCSEEEEEEECCTTCCSSEEEEEEC--------CC-CEEEEEEGGGSCGGGHHHHTCTTTSCEEEEEEEEEEHHHH
T ss_pred HHhcCCCEEEEEEECCCCCCceeEEEEEccccccccCCC-CCEEEEEeccCCHHHHhhhcCCCCceEeEeeeEEEEHHHH
Confidence 88888888766 2 22 2355644443 12 43 4555443321 122466888888887766
Q ss_pred hhc-ccC--CC----------------------Cccc---chHHHHHhcCcEEEEEe-CceEEecCCHHHHHHHHHHHHh
Q 020113 182 DRI-ELK--PT----------------------SIEK---EVFPEIAAENKLFAMVL-PGFWMDIGQPKDYITGLRLYLD 232 (331)
Q Consensus 182 ~~l-~~~--~~----------------------~~~~---~~l~~l~~~~~i~~~~~-~~~~~~i~t~~d~~~a~~~~l~ 232 (331)
+.+ +.. .. .+|. ++++.+ .+..++++ ...|..+-+..|++.....+..
T Consensus 314 ~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~---~~~~~ieV~R~rF~PvKn~sdLl~~~Sdly~ 390 (484)
T 3gue_A 314 KKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLF---DRSEAVVVPRERFAPVKTCSDLLALRSDAYQ 390 (484)
T ss_dssp HHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTS---SSEEEEECCGGGCCCCSSHHHHHHHHSTTEE
T ss_pred HHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhC---CccEEEEEChhhccccccchHHHHHhhhcee
Confidence 433 111 00 0111 122221 24445544 3357788888887766433221
Q ss_pred hhccccCCccCCC-ceEecceEEcCCcEECCCcEECCC----CC---ceE--eCCEEcCCCEECCCcEEccceEE----C
Q 020113 233 FLQKNSSSKLATG-SNIIGNVLVHEGAKIGDGCLIGPD----KH---ACI--SSSIIGWHSTVGRWARVENMTIL----G 298 (331)
Q Consensus 233 ~~~~~~~~~i~~~-~~i~~~~~i~~~~~i~~~~~I~~~----~~---~~i--~~s~i~~~~~ig~~~~i~~~~~i----~ 298 (331)
+.........+. ....|.+.+++.- ...|+.. .+ +.+ ..-+|..+++.|.++++.+.++| |
T Consensus 391 -l~~~~~l~~~~~~~~~~P~v~L~~~~----~~~v~~f~~rf~~giPsl~~~~~L~V~Gdv~fg~~v~l~G~v~i~~~~g 465 (484)
T 3gue_A 391 -VTEDQRLVLCEERNGKPPAIDLDGEH----YKMIDGFEKLVKGGVPSLRQCTSLTVRGLVEFGADVSVRGNVVIKNLKE 465 (484)
T ss_dssp -ECTTSCEEECGGGTTCCCEEEECTTT----SSSHHHHHHHHTTCCCBCTTEEEEEEESSEEECTTCEEEEEEEEEECSS
T ss_pred -ccCCceEEeccccCCCCCeEEECchh----cCcHHHHHHhcCCCCCChhhCCEEEEecceEECCCcEEEEEEEEEcCCC
Confidence 010000000000 0112333332210 1111100 11 111 22346677888888888876666 4
Q ss_pred CCcEECcccEEcCcEEcc
Q 020113 299 EDVHVADEVYSNGAVVLP 316 (331)
Q Consensus 299 ~~~~i~~~~~i~~~~v~~ 316 (331)
+...|-+|+++.+.+|.+
T Consensus 466 ~~~~ip~g~~l~~~~~~~ 483 (484)
T 3gue_A 466 EPLIIGSGRVLDNEVVVV 483 (484)
T ss_dssp SCEEECTTCEEESCEEEE
T ss_pred CeeecCCCCEecceecCC
Confidence 557899999998877653
No 168
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.22 E-value=3.8e-06 Score=69.49 Aligned_cols=38 Identities=24% Similarity=0.335 Sum_probs=16.6
Q ss_pred cEEccceEECCCcEECcccEE-cCcEEccCeEEccCccC
Q 020113 289 ARVENMTILGEDVHVADEVYS-NGAVVLPHKEIKSSIVN 326 (331)
Q Consensus 289 ~~i~~~~~i~~~~~i~~~~~i-~~~~v~~~~~i~~~~~~ 326 (331)
++|+++|.||.+++|..+++| .+++|+.++++..++..
T Consensus 114 v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~~~v~~ 152 (209)
T 1mr7_A 114 TIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAP 152 (209)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCT
T ss_pred cEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEcCCCCC
Confidence 333333333333333334444 24555555555555443
No 169
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=97.92 E-value=4.7e-05 Score=62.96 Aligned_cols=45 Identities=9% Similarity=0.070 Sum_probs=23.6
Q ss_pred CEECCCcEEccceEECCCcEECcccEE-cCcEEccCeEEccCccCC
Q 020113 283 STVGRWARVENMTILGEDVHVADEVYS-NGAVVLPHKEIKSSIVNP 327 (331)
Q Consensus 283 ~~ig~~~~i~~~~~i~~~~~i~~~~~i-~~~~v~~~~~i~~~~~~~ 327 (331)
+.+...++|+++|.||.++.|..+++| .+|+|+.++++.+++...
T Consensus 105 ~~~~~~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~~vp~~ 150 (212)
T 1xat_A 105 YQPAGDTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPY 150 (212)
T ss_dssp CCCCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTT
T ss_pred ceecCCeEECCCCEECCCCEEeCCCEECCCCEECCCCEEcccCCCC
Confidence 334444455555555555555555555 356666666666655443
No 170
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=97.81 E-value=2e-05 Score=65.30 Aligned_cols=103 Identities=20% Similarity=0.287 Sum_probs=71.0
Q ss_pred CeEEEEe--CCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCCCEE-EEEeccChHHHHHHHHHhhhccCeEEEE
Q 020113 1 MKALILV--GGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEV-VLAINYQPEVMLNFLKEFEKKLEIKITC 77 (331)
Q Consensus 1 m~avIlA--~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi~~i-~iv~~~~~~~i~~~~~~~~~~~~~~v~~ 77 (331)
|.+||++ +..-|||.+ .+.+......++||++|+++.+..++++.+ +++++... .. .+ ++..+
T Consensus 4 ~~~vip~k~g~~KtRL~~---~l~~~~~~~l~~~ll~~vl~~l~~~~~~~v~vvv~~~~~--~~----~~---~~~~~-- 69 (211)
T 2i5e_A 4 MRAVIPYKKAGAKSRLSP---VLSLQEREEFVELMLNQVISSLKGAGIEQVDILSPSVYG--LE----EM---TEARV-- 69 (211)
T ss_dssp CEEEEECCCTTTTGGGTT---TSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESSCTT--CS----SC---CSSEE--
T ss_pred eEEEEEeCCCCCccccCc---cCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEcCcHH--HH----hh---cCCEE--
Confidence 6789999 556677743 222222236689999999999999988898 88876542 11 11 24444
Q ss_pred eeCCcccCChHHHHHHHhhccCCCCCcEEEEeCCe--eccccHHHHHH
Q 020113 78 SQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIE 123 (331)
Q Consensus 78 ~~~~~~~G~~~al~~~~~~~~~~~~~~~lv~~~D~--i~~~~l~~~l~ 123 (331)
+.+. .|.++++..+.+... + .++++.||+ +....+..+++
T Consensus 70 v~~~--~gl~~sl~~a~~~~~-~---~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 70 LLDE--KDLNEALNRYLKEAE-E---PVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp EECC--SCHHHHHHHHHHHCC-S---CEEEECSCCTTCCHHHHHHHTT
T ss_pred EECC--CCHHHHHHHHHHhcC-C---CEEEEcCCcCCCCHHHHHHHHc
Confidence 3333 688899998887762 2 899999999 44555777766
No 171
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.51 E-value=0.00079 Score=63.57 Aligned_cols=130 Identities=14% Similarity=0.211 Sum_probs=85.7
Q ss_pred eEEEEeCCCCcccCCCCCCCCCCCceeC---CcchHHHHHHHHHHc-C--CCEEEEEeccChHHHHHHHHHhhhccCeEE
Q 020113 2 KALILVGGFGTRLRPLTLSVPKPLVDFA---NKPMILHQIEALKAV-G--VTEVVLAINYQPEVMLNFLKEFEKKLEIKI 75 (331)
Q Consensus 2 ~avIlA~G~g~rl~plt~~~pK~llpi~---g~pli~~~l~~l~~~-g--i~~i~iv~~~~~~~i~~~~~~~~~~~~~~v 75 (331)
-+|+||||.|+||+- ..||.++|+. |++++++.++++.+. | +..+++.+....+.+.+++++++-.. ..+
T Consensus 116 avvllaGGlGTRLG~---~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~fgl~~-~~V 191 (630)
T 3ogz_A 116 VFVLVAGGLGERLGY---SSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRELQLEV-PNL 191 (630)
T ss_dssp EEEEECCCEEGGGTE---EEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHHTTCCC-TTE
T ss_pred eEEEecCCcccccCC---CCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHHhCCCc-ccE
Confidence 367889999999986 6799999996 999999999988863 3 55666666677789999999854211 112
Q ss_pred EEeeCC----------------------cccCChHHH--HH---------------------HHhhccCCCCCcEEEEeC
Q 020113 76 TCSQET----------------------EPLGTAGPL--AL---------------------ARDKLIDDSGEPFFVLNS 110 (331)
Q Consensus 76 ~~~~~~----------------------~~~G~~~al--~~---------------------~~~~~~~~~~~~~lv~~~ 110 (331)
.+..|. .|.|.++-. +. .++.+....-+++.+.+.
T Consensus 192 ~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~~v 271 (630)
T 3ogz_A 192 HVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQD 271 (630)
T ss_dssp EEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEEEECT
T ss_pred EEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEEcc
Confidence 221110 144554422 21 234443333338889999
Q ss_pred Ceec-cccHHHHHHHHhhcCCceEEE
Q 020113 111 DVIS-EYPLKQMIEFHRGRGGEASIM 135 (331)
Q Consensus 111 D~i~-~~~l~~~l~~~~~~~~~~~i~ 135 (331)
|.+. ...-..++-.+.++++++.+-
T Consensus 272 DN~L~~~~DP~~lG~~~~~~~d~~~k 297 (630)
T 3ogz_A 272 TNAGATITIPISLALSAEHSLDMNFT 297 (630)
T ss_dssp TBTTHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCccccccCHHHhHHHHhcCCCEEEE
Confidence 9944 333344777888888887666
No 172
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=96.79 E-value=0.019 Score=48.21 Aligned_cols=90 Identities=10% Similarity=0.124 Sum_probs=60.1
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHH---HHHHHHhhhccCeEEEEeeCCcccCChHHHHHHHhhccCCCCCcEE
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVM---LNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFF 106 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i---~~~~~~~~~~~~~~v~~~~~~~~~G~~~al~~~~~~~~~~~~~~~l 106 (331)
-++|+.++++.+...+...++++++...... .... . .+ +.+..+ ...|.+.++..+...+.....+.++
T Consensus 36 ~~~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~-~----~~--~~~~~q-~~~gLg~rl~~a~~~~~~~~~~~vl 107 (242)
T 3cgx_A 36 YRHFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWL-G----PQ--HMFAAQ-QGLDLGERMKHAMQKAFDDGYDRVV 107 (242)
T ss_dssp HHHHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHH-C----TT--SEEEEC-CSSSHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhc-c----CC--cEEecC-CCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 3689999999999988777766665544332 2222 1 12 233333 4558889999888876222223899
Q ss_pred EEeCCe--eccccHHHHHHHHhh
Q 020113 107 VLNSDV--ISEYPLKQMIEFHRG 127 (331)
Q Consensus 107 v~~~D~--i~~~~l~~~l~~~~~ 127 (331)
++.+|+ +....+.++++...+
T Consensus 108 iigaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 108 LMGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp EECSSCTTCCHHHHHHHHHHTTT
T ss_pred EEcCCCCCCCHHHHHHHHHHhcc
Confidence 999999 667778988886543
No 173
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=94.47 E-value=0.44 Score=39.59 Aligned_cols=98 Identities=16% Similarity=0.125 Sum_probs=67.0
Q ss_pred ceeCCc-chHHHHHHHHHHcCCC--EEEEEeccChHHHHHHHHHhhhccCeEEEEeeCC--------cccCChHHHHHHH
Q 020113 26 VDFANK-PMILHQIEALKAVGVT--EVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET--------EPLGTAGPLALAR 94 (331)
Q Consensus 26 lpi~g~-pli~~~l~~l~~~gi~--~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~--------~~~G~~~al~~~~ 94 (331)
+|.-|+ ..|..+|+.+.+.... +++|+-+...+...+.++++... ..+.++..+ ...|.+.+...++
T Consensus 7 Ip~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~~--~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi 84 (255)
T 1qg8_A 7 MTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLND--NRVRFYQSDISGVKERTEKTRYAALINQAI 84 (255)
T ss_dssp EEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGGS--TTEEEEECCCCSHHHHHSSCHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhhc--CCEEEEecccccccccccccCHHHHHHHHH
Confidence 344444 6899999999875432 56665554456677777775442 235555554 4667888888888
Q ss_pred hhccCCCCCcEEEEeCCeecccc-HHHHHHHHhhc
Q 020113 95 DKLIDDSGEPFFVLNSDVISEYP-LKQMIEFHRGR 128 (331)
Q Consensus 95 ~~~~~~~~~~~lv~~~D~i~~~~-l~~~l~~~~~~ 128 (331)
+..+.+ .++++..|.+...+ +..+++.+.+.
T Consensus 85 ~~a~g~---~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 85 EMAEGE---YITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp HHCCCS---EEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred HHcCCC---EEEEeCCCCccChHHHHHHHHHHHhC
Confidence 887554 88899999976555 88888888765
No 174
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=93.87 E-value=0.38 Score=39.51 Aligned_cols=105 Identities=14% Similarity=0.130 Sum_probs=67.6
Q ss_pred ceeCCc-chHHHHHHHHHHcCCC--EEEEEeccChHHHHHHHHHhhhccCeEEEEeeCCcccCChHHHHHHHhhccCCCC
Q 020113 26 VDFANK-PMILHQIEALKAVGVT--EVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSG 102 (331)
Q Consensus 26 lpi~g~-pli~~~l~~l~~~gi~--~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~G~~~al~~~~~~~~~~~~ 102 (331)
+|.-|+ ..|..+|+.+.+.... +++|+-+...+...+.++++..+.. .+.++. .+..|.+.+...+++....+
T Consensus 11 Ip~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~-~i~~i~-~~n~G~~~a~N~g~~~a~g~-- 86 (240)
T 3bcv_A 11 VPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYP-NIKVIH-KKNAGLGMACNSGLDVATGE-- 86 (240)
T ss_dssp EEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCS-SEEEEE-CCCCCHHHHHHHHHHHCCSS--
T ss_pred EecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCC-CEEEEE-CCCCChHHHHHHHHHHcCCC--
Confidence 444454 6999999999875432 5666554333444555555433221 244444 34678888888888887654
Q ss_pred CcEEEEeCCeecccc-HHHHHHHHhhcCCceEEE
Q 020113 103 EPFFVLNSDVISEYP-LKQMIEFHRGRGGEASIM 135 (331)
Q Consensus 103 ~~~lv~~~D~i~~~~-l~~~l~~~~~~~~~~~i~ 135 (331)
.++++..|.+...+ ++.+++.+.+.+.++.+.
T Consensus 87 -~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~ 119 (240)
T 3bcv_A 87 -YVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFT 119 (240)
T ss_dssp -EEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC
T ss_pred -EEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEE
Confidence 88999999976655 888888887755555443
No 175
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=93.09 E-value=0.68 Score=42.62 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=69.8
Q ss_pred ceeCCc--chHHHHHHHHHHcCC-C---EEEEEeccChH-HHHHHHHHhhhccCeEEEEeeCCcccCChHHHHHHHhhcc
Q 020113 26 VDFANK--PMILHQIEALKAVGV-T---EVVLAINYQPE-VMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLI 98 (331)
Q Consensus 26 lpi~g~--pli~~~l~~l~~~gi-~---~i~iv~~~~~~-~i~~~~~~~~~~~~~~v~~~~~~~~~G~~~al~~~~~~~~ 98 (331)
+|.-|. ..|..+|+.+.+.-. . +|+||-+...+ ...+.++++..+.+..+.++..+...|.+.+...+++...
T Consensus 35 Ip~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~~A~ 114 (472)
T 1xhb_A 35 IVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSR 114 (472)
T ss_dssp EEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHHHHHHHHCC
T ss_pred EEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCChHHHHHHHHHhcc
Confidence 344455 589999999887542 2 67766543332 3555555543333334666666666788889988888876
Q ss_pred CCCCCcEEEEeCCeecccc-HHHHHHHHhhcCCce
Q 020113 99 DDSGEPFFVLNSDVISEYP-LKQMIEFHRGRGGEA 132 (331)
Q Consensus 99 ~~~~~~~lv~~~D~i~~~~-l~~~l~~~~~~~~~~ 132 (331)
.+ .++++..|.....+ ++.+++.+.+....+
T Consensus 115 gd---~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 115 GQ---VITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp SS---EEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred CC---eEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 54 88899999976554 899999887665443
No 176
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=88.83 E-value=1.5 Score=41.43 Aligned_cols=101 Identities=13% Similarity=0.163 Sum_probs=66.2
Q ss_pred ceeCCc--chHHHHHHHHHHcCC-C---EEEEEeccChHHH-HHHHHHhhhccCeEEEEeeCCcccCChHHHHHHHhhcc
Q 020113 26 VDFANK--PMILHQIEALKAVGV-T---EVVLAINYQPEVM-LNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLI 98 (331)
Q Consensus 26 lpi~g~--pli~~~l~~l~~~gi-~---~i~iv~~~~~~~i-~~~~~~~~~~~~~~v~~~~~~~~~G~~~al~~~~~~~~ 98 (331)
+|.-|. ..|..+|+.+.+... . +|+||-+...+.. .+.+.++.... ..+.++......|.+.+...++....
T Consensus 118 Ip~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~-~~v~vi~~~~n~G~~~A~N~G~~~A~ 196 (570)
T 2d7i_A 118 IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALF-PSVRILRTKKREGLIRTRMLGASVAT 196 (570)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS-TTEEEEECSSCCCHHHHHHHHHHHCC
T ss_pred EEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhC-CeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 344565 488899998876432 2 6777654333222 45555543332 23555665667788999998888876
Q ss_pred CCCCCcEEEEeCCeecccc-HHHHHHHHhhcCC
Q 020113 99 DDSGEPFFVLNSDVISEYP-LKQMIEFHRGRGG 130 (331)
Q Consensus 99 ~~~~~~~lv~~~D~i~~~~-l~~~l~~~~~~~~ 130 (331)
.+ .++++..|.....+ |+.+++.+.+...
T Consensus 197 gd---~i~fLD~D~~~~p~~L~~ll~~l~~~~~ 226 (570)
T 2d7i_A 197 GD---VITFLDSHCEANVNWLPPLLDRIARNRK 226 (570)
T ss_dssp SS---EEEECCSSEEECTTCSHHHHHHHHHCTT
T ss_pred CC---EEEEEcCCccccccHHHHHHHHHHhCCC
Confidence 53 88899999966554 8888888776543
No 177
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=86.59 E-value=4.7 Score=38.37 Aligned_cols=105 Identities=17% Similarity=0.138 Sum_probs=68.0
Q ss_pred ceeCCc-chHHHHHHHHHHcC---CCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCCcccCChHHHHHHHhhccCCC
Q 020113 26 VDFANK-PMILHQIEALKAVG---VTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDS 101 (331)
Q Consensus 26 lpi~g~-pli~~~l~~l~~~g---i~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~G~~~al~~~~~~~~~~~ 101 (331)
+|.-|. ..|..+|+.+.... .-+|+|+-+...+...+.+.++....++.+... .....|.+.+...++.....+
T Consensus 99 Ip~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~-~~~~~g~~~a~N~g~~~a~g~- 176 (625)
T 2z86_A 99 IPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQ-KDYGYQLCAVRNLGLRAAKYN- 176 (625)
T ss_dssp EEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEE-CCCSCCHHHHHHHHHHHCCSS-
T ss_pred EecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEe-CCCCcchhHHHHHHHHhCCcC-
Confidence 455566 68999999998763 346666665444556667776544334444322 223345677888888877543
Q ss_pred CCcEEEEeCCeecccc-HHHHHHHHhhcCCceEE
Q 020113 102 GEPFFVLNSDVISEYP-LKQMIEFHRGRGGEASI 134 (331)
Q Consensus 102 ~~~~lv~~~D~i~~~~-l~~~l~~~~~~~~~~~i 134 (331)
.++++.+|.....+ +..+++.+.+....+.+
T Consensus 177 --~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~ 208 (625)
T 2z86_A 177 --YVAILDCDMAPNPLWVQSYMELLAVDDNVALI 208 (625)
T ss_dssp --EEEEECTTEEECTTHHHHHHHHHHHCTTEEEE
T ss_pred --EEEEECCCCCCCHHHHHHHHHHHhcCCceEEE
Confidence 88899999976655 78888887765544433
No 178
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=81.41 E-value=2.5 Score=36.79 Aligned_cols=100 Identities=11% Similarity=0.019 Sum_probs=62.7
Q ss_pred ceeCCc-chHHHHHHHHHHc--C-CCEEEEEeccChHHHHHHHHHhhhccCeEEEEee-CCcccCChHHHHHHHhhccCC
Q 020113 26 VDFANK-PMILHQIEALKAV--G-VTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQ-ETEPLGTAGPLALARDKLIDD 100 (331)
Q Consensus 26 lpi~g~-pli~~~l~~l~~~--g-i~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~-~~~~~G~~~al~~~~~~~~~~ 100 (331)
+|..|. ..|..+|+.+.+. . ..+|+|+-+...+...+.++++..+....+.++. .....|-+.++..++.....+
T Consensus 54 Ip~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n~G~~~a~n~g~~~a~gd 133 (329)
T 3ckj_A 54 LPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRPGKGEALWRSLAASRGD 133 (329)
T ss_dssp EEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCCSHHHHHHHHHHHCCCS
T ss_pred EeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhccceeeeccCCCCCCHHHHHHHHHHhCCCC
Confidence 444454 6899999998875 2 2577776654444555566654221100011111 345568888998888887553
Q ss_pred CCCcEEEEeCCee-cccc-HHHHHHHHhhc
Q 020113 101 SGEPFFVLNSDVI-SEYP-LKQMIEFHRGR 128 (331)
Q Consensus 101 ~~~~~lv~~~D~i-~~~~-l~~~l~~~~~~ 128 (331)
.++++.+|.. ...+ +..+++.+.+.
T Consensus 134 ---~i~~lD~D~~~~~p~~l~~l~~~l~~~ 160 (329)
T 3ckj_A 134 ---IVVFVDSDLINPHPMFVPWLVGPLLTG 160 (329)
T ss_dssp ---EEEECCTTEESCCTTHHHHHHHHHHSC
T ss_pred ---EEEEECCCCCCcChHHHHHHHHHHHhC
Confidence 8889999997 6554 88888875543
No 179
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=78.20 E-value=8.1 Score=35.64 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=63.8
Q ss_pred ceeCCc-c-hHHHHHHHHHHcCC-C---EEEEEeccCh-HHHHHHHHHhhhccCeEEEEeeCCcccCChHHHHHHHhhcc
Q 020113 26 VDFANK-P-MILHQIEALKAVGV-T---EVVLAINYQP-EVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLI 98 (331)
Q Consensus 26 lpi~g~-p-li~~~l~~l~~~gi-~---~i~iv~~~~~-~~i~~~~~~~~~~~~~~v~~~~~~~~~G~~~al~~~~~~~~ 98 (331)
+|.-|. . .|..+|+.+.+.-. . +|+||=+... +.+...+.+ . ..+.++......|.+.+...++....
T Consensus 72 Ip~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~---~--~~v~vi~~~~n~G~~~A~N~G~~~A~ 146 (501)
T 2ffu_A 72 ITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGK---I--EKVRVLRNDRREGLMRSRVRGADAAQ 146 (501)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGG---B--TTEEEEECSSCCHHHHHHHHHHHHCC
T ss_pred EEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhc---C--CCEEEEECCCCcCHHHHHHHHHHhcC
Confidence 444566 3 89999998876432 2 6776654322 233333322 1 23555555666788889998888886
Q ss_pred CCCCCcEEEEeCCeecccc-HHHHHHHHhhcCCc
Q 020113 99 DDSGEPFFVLNSDVISEYP-LKQMIEFHRGRGGE 131 (331)
Q Consensus 99 ~~~~~~~lv~~~D~i~~~~-l~~~l~~~~~~~~~ 131 (331)
.+ .++++.+|.....+ +..+++.+.+....
T Consensus 147 gd---~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 147 AK---VLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp SS---EEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred CC---EEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 54 88899999965544 89999988776553
No 180
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=77.88 E-value=10 Score=36.08 Aligned_cols=99 Identities=15% Similarity=0.048 Sum_probs=62.6
Q ss_pred eeCCc-chHHHHHHHHHHcCC-C-EEEEEeccChHHHHHHHHHhhhccCeEEEEeeCCcccCChHHHHHHHhhccCCCCC
Q 020113 27 DFANK-PMILHQIEALKAVGV-T-EVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGE 103 (331)
Q Consensus 27 pi~g~-pli~~~l~~l~~~gi-~-~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~G~~~al~~~~~~~~~~~~~ 103 (331)
|..|. ..|..+|+.+..... + +++|+-+...+...+.+.++..... .+.++. ....|.+.+...++.....+
T Consensus 382 ~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~-~i~~~~-~~n~G~~~a~n~g~~~a~g~--- 456 (625)
T 2z86_A 382 PAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHP-RVRFIS-QKNKGIGSASNTAVRLCRGF--- 456 (625)
T ss_dssp EESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCT-TEEEEE-ECCCCHHHHHHHHHHHCCSS---
T ss_pred eCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCC-cEEEEe-CCCCCHHHHHHHHHHhcCCC---
Confidence 33354 799999999986532 2 5666554333445555555432221 233333 34568888888888887553
Q ss_pred cEEEEeCCeecccc-HHHHHHHHhhcCC
Q 020113 104 PFFVLNSDVISEYP-LKQMIEFHRGRGG 130 (331)
Q Consensus 104 ~~lv~~~D~i~~~~-l~~~l~~~~~~~~ 130 (331)
.++++..|.+...+ +..+++.+.+...
T Consensus 457 ~i~~ld~D~~~~~~~l~~~~~~~~~~~~ 484 (625)
T 2z86_A 457 YIGQLDSDDFLEPDAVELCLDEFRKDLS 484 (625)
T ss_dssp EEEECCTTCEECTTHHHHHHHHHHHCTT
T ss_pred EEEEECCCcccChhHHHHHHHHHHhCCC
Confidence 88899999976555 8888887765443
No 181
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=76.54 E-value=15 Score=36.35 Aligned_cols=102 Identities=20% Similarity=0.246 Sum_probs=63.4
Q ss_pred CceeCCcc--hHHHHHHHHHHcCCC----EEEEEeccChHHH---------------HHHHHHhhhccCeEEEEeeCCcc
Q 020113 25 LVDFANKP--MILHQIEALKAVGVT----EVVLAINYQPEVM---------------LNFLKEFEKKLEIKITCSQETEP 83 (331)
Q Consensus 25 llpi~g~p--li~~~l~~l~~~gi~----~i~iv~~~~~~~i---------------~~~~~~~~~~~~~~v~~~~~~~~ 83 (331)
++|..|.+ ++..+++.+.+.... +|+|+.+...+.. .+.++++.++.++.+... ....
T Consensus 145 iIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~i~~-~~~~ 223 (802)
T 4hg6_A 145 LVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYSTR-ERNE 223 (802)
T ss_dssp EEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEEC-SSCC
T ss_pred EEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEEEEe-cCCC
Confidence 45555664 669999999875432 5777665332222 223333333445544322 2333
Q ss_pred cCChHHHHHHHhhccCCCCCcEEEEeCCeecccc-HHHHHHHHhhcCC
Q 020113 84 LGTAGPLALARDKLIDDSGEPFFVLNSDVISEYP-LKQMIEFHRGRGG 130 (331)
Q Consensus 84 ~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~~~-l~~~l~~~~~~~~ 130 (331)
.|-+.++..+++..+.+ .++++.+|.....+ ++.+++.+.+...
T Consensus 224 ~GKa~alN~gl~~a~gd---~Il~lDaD~~~~pd~L~~lv~~~~~dp~ 268 (802)
T 4hg6_A 224 HAKAGNMSAALERLKGE---LVVVFDADHVPSRDFLARTVGYFVEDPD 268 (802)
T ss_dssp SHHHHHHHHHHHHCCCS---EEEECCTTEEECTTHHHHHHHHHHHSSS
T ss_pred CcchHHHHHHHHhcCCC---EEEEECCCCCcChHHHHHHHHHHhcCCC
Confidence 56778888888887554 88899999976655 8888888865443
No 182
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=67.56 E-value=19 Score=34.54 Aligned_cols=99 Identities=11% Similarity=0.166 Sum_probs=61.5
Q ss_pred CCc-chHHHHHHHHHHc-----CCCEEEEEeccCh-----HHHHHHHHHhhhccCeEEEEeeCCcccCChHHHHHHHhhc
Q 020113 29 ANK-PMILHQIEALKAV-----GVTEVVLAINYQP-----EVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKL 97 (331)
Q Consensus 29 ~g~-pli~~~l~~l~~~-----gi~~i~iv~~~~~-----~~i~~~~~~~~~~~~~~v~~~~~~~~~G~~~al~~~~~~~ 97 (331)
-|+ ..|..+|+.+.+. ...+|+||=+... ..+.+.+.... ..+.++.+. ..|-+.+...++...
T Consensus 189 YN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~----~~I~vI~~~-N~G~a~a~N~Gl~~A 263 (657)
T 4fix_A 189 FNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG----SRLSIHDQP-NLGGSGGYSRVMYEA 263 (657)
T ss_dssp SSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHG----GGEEEEECC-CCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcC----CCEEEEECC-CCCHHHHHHHHHHHH
Confidence 354 6999999998764 2336666544321 23444544422 235555555 667777777777665
Q ss_pred cCC-CCCcEEEEeCCeecccc-HHHHHHHHhhcCCce
Q 020113 98 IDD-SGEPFFVLNSDVISEYP-LKQMIEFHRGRGGEA 132 (331)
Q Consensus 98 ~~~-~~~~~lv~~~D~i~~~~-l~~~l~~~~~~~~~~ 132 (331)
... ..+.++++..|.+...+ +..+++.+......+
T Consensus 264 ~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~ 300 (657)
T 4fix_A 264 LKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPM 300 (657)
T ss_dssp HHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCC
T ss_pred HhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcE
Confidence 331 22388999999976655 888888887765443
No 183
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=67.04 E-value=5.4 Score=35.67 Aligned_cols=104 Identities=9% Similarity=-0.006 Sum_probs=65.2
Q ss_pred CceeCCc-chHHHHHHHHHH----cC-CCEEEEEeccChHHHHHHHHHhhhccCeEEEE-----eeCCcccCChHHHHHH
Q 020113 25 LVDFANK-PMILHQIEALKA----VG-VTEVVLAINYQPEVMLNFLKEFEKKLEIKITC-----SQETEPLGTAGPLALA 93 (331)
Q Consensus 25 llpi~g~-pli~~~l~~l~~----~g-i~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~-----~~~~~~~G~~~al~~~ 93 (331)
.+|..|. ..|..+|+.+.+ .+ ..+|+||-+...+...+.+.++. .++.. +......|-+.++..+
T Consensus 99 VIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~----~~v~~~~~~~i~~~~n~G~g~A~n~G 174 (387)
T 3f1y_A 99 VLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHG----AEVYSENELMSGYGDAHGKGDAMWRA 174 (387)
T ss_dssp EEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTT----CEEEEGGGTTGGGCSCCSHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhC----chhcccceeEecCCccCCHHHHHHHH
Confidence 4455554 678888887754 22 45777766544455566666542 23221 1223456888899988
Q ss_pred HhhccCCCCCcEEEEeCCee-ccc-cHHHHHHHHhhc-CCceEEE
Q 020113 94 RDKLIDDSGEPFFVLNSDVI-SEY-PLKQMIEFHRGR-GGEASIM 135 (331)
Q Consensus 94 ~~~~~~~~~~~~lv~~~D~i-~~~-~l~~~l~~~~~~-~~~~~i~ 135 (331)
+.....+ .++++.+|.. ... .+..+++...+. +.+++..
T Consensus 175 ~~~A~gd---~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G 216 (387)
T 3f1y_A 175 LSVTRGD---LVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKA 216 (387)
T ss_dssp TTTCCSS---EEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEE
T ss_pred HHhcCCC---EEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEE
Confidence 8877543 7888899997 444 488888887664 4444433
No 184
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=64.23 E-value=1.4 Score=43.06 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=0.0
Q ss_pred ceeCCc-chHHHHHHHHHHcCC--CEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCCcccCChHHHHHHHhhccCCCC
Q 020113 26 VDFANK-PMILHQIEALKAVGV--TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSG 102 (331)
Q Consensus 26 lpi~g~-pli~~~l~~l~~~gi--~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~G~~~al~~~~~~~~~~~~ 102 (331)
+|.-|. ..|..+|+.+.+... -+|+||-+...+...+.++++..+++..+.++..++..|.+.+...+++....+
T Consensus 8 Ip~yN~~~~L~~~L~Sll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A~gd-- 85 (729)
T 3l7i_A 8 VTYYNAEEYITGCLESIKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEVETP-- 85 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEcCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhccCC--
Confidence 344444 577788887765432 245555443345556666665444344566666565678888888888877654
Q ss_pred CcEEEEeCCeecccc-HHHHHHHHh
Q 020113 103 EPFFVLNSDVISEYP-LKQMIEFHR 126 (331)
Q Consensus 103 ~~~lv~~~D~i~~~~-l~~~l~~~~ 126 (331)
.++++.+|.+...+ ++.+++.+.
T Consensus 86 -yI~flD~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 86 -YFMFLDADDELASYAITFYLEKFN 109 (729)
T ss_dssp -------------------------
T ss_pred -EEEEECCCCCCChhHHHHHHHHhc
Confidence 88899999965544 777777766
No 185
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=60.55 E-value=25 Score=23.59 Aligned_cols=41 Identities=12% Similarity=0.168 Sum_probs=32.3
Q ss_pred chHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhccC
Q 020113 32 PMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLE 72 (331)
Q Consensus 32 pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~ 72 (331)
..++..|+.....|+..+.|+.+.....+++.+.+|-++.+
T Consensus 19 ~~l~~fl~~a~~~g~~~v~IIHGkG~GvLr~~V~~~L~~~~ 59 (83)
T 2zqe_A 19 LEVDQALEEARALGLSTLRLLHGKGTGALRQAIREALRRDK 59 (83)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSTTSHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhcCC
Confidence 46777888888899999999999876677777777765444
No 186
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=56.81 E-value=78 Score=25.70 Aligned_cols=52 Identities=6% Similarity=-0.070 Sum_probs=35.2
Q ss_pred eEEEEeeCCcc--cCChHHHHHHHhhccCCCCCcEEEEeCCeecccc-HHHHHHHHhh
Q 020113 73 IKITCSQETEP--LGTAGPLALARDKLIDDSGEPFFVLNSDVISEYP-LKQMIEFHRG 127 (331)
Q Consensus 73 ~~v~~~~~~~~--~G~~~al~~~~~~~~~~~~~~~lv~~~D~i~~~~-l~~~l~~~~~ 127 (331)
.++.++..... .|.+.+.-.+++..+.+ .++++..|.....+ ++.+++.+.+
T Consensus 47 ~EiIVVDn~s~d~~g~a~a~N~Gi~~A~g~---yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 47 AEFLAADNREGNQFHGFSWHKQMLPRCKGR---YVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp EEEEEEECTTSCSCCTTTHHHHHGGGCCSS---EEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEECCCCCcccHHHHHHHHHHhcCCC---EEEEECCCcccCccHHHHHHHHHHh
Confidence 45555543322 35667777777776543 89999999976655 7888887665
No 187
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=55.55 E-value=37 Score=27.37 Aligned_cols=16 Identities=25% Similarity=0.405 Sum_probs=12.0
Q ss_pred CeEEEEeCCCCcccCC
Q 020113 1 MKALILVGGFGTRLRP 16 (331)
Q Consensus 1 m~avIlA~G~g~rl~p 16 (331)
|+..||+.|.|+.|..
T Consensus 3 ~riavl~Sg~Gsnl~a 18 (211)
T 3p9x_A 3 KRVAIFASGSGTNAEA 18 (211)
T ss_dssp CEEEEECCTTCHHHHH
T ss_pred CEEEEEEeCCchHHHH
Confidence 4677888888887744
No 188
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=51.02 E-value=89 Score=25.00 Aligned_cols=93 Identities=18% Similarity=0.181 Sum_probs=45.5
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHcCC-CEE-EEEeccChHHHHHHHHHhhhccCeEEEEe
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGV-TEV-VLAINYQPEVMLNFLKEFEKKLEIKITCS 78 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~gi-~~i-~iv~~~~~~~i~~~~~~~~~~~~~~v~~~ 78 (331)
|+.+||+.|.|+.| +.+++.+.+... -+| .|++++......++ ..+.++++...
T Consensus 1 ~ri~vl~Sg~gsnl--------------------~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~----A~~~gIp~~~~ 56 (212)
T 1jkx_A 1 MNIVVLISGNGSNL--------------------QAIIDACKTNKIKGTVRAVFSNKADAFGLER----ARQAGIATHTL 56 (212)
T ss_dssp CEEEEEESSCCHHH--------------------HHHHHHHHTTSSSSEEEEEEESCTTCHHHHH----HHHTTCEEEEC
T ss_pred CEEEEEEECCcHHH--------------------HHHHHHHHcCCCCceEEEEEeCCCchHHHHH----HHHcCCcEEEe
Confidence 56788888877654 444555554422 244 45555443333333 33456776543
Q ss_pred eCCcccCC----hHHHHHHHhhccCCCCCcEEEEeCCe-eccccHHHHHHHH
Q 020113 79 QETEPLGT----AGPLALARDKLIDDSGEPFFVLNSDV-ISEYPLKQMIEFH 125 (331)
Q Consensus 79 ~~~~~~G~----~~al~~~~~~~~~~~~~~~lv~~~D~-i~~~~l~~~l~~~ 125 (331)
.. ....+ -..+...+...+. +++|+.|=. +.. ..+++.+
T Consensus 57 ~~-~~~~~r~~~~~~~~~~l~~~~~----Dliv~agy~~il~---~~~l~~~ 100 (212)
T 1jkx_A 57 IA-SAFDSREAYDRELIHEIDMYAP----DVVVLAGFMRILS---PAFVSHY 100 (212)
T ss_dssp CG-GGCSSHHHHHHHHHHHHGGGCC----SEEEESSCCSCCC---HHHHHHT
T ss_pred Cc-ccccchhhccHHHHHHHHhcCC----CEEEEeChhhhCC---HHHHhhc
Confidence 22 12122 1234444444433 677777654 444 3444443
No 189
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=50.11 E-value=90 Score=27.16 Aligned_cols=91 Identities=10% Similarity=0.084 Sum_probs=53.1
Q ss_pred CceeCCcchHHHHHHHHHHcC--C--CEEEEEeccChHHHHHHHHHhhhccCeEEEEee---------CCcccCC-----
Q 020113 25 LVDFANKPMILHQIEALKAVG--V--TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQ---------ETEPLGT----- 86 (331)
Q Consensus 25 llpi~g~pli~~~l~~l~~~g--i--~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~---------~~~~~G~----- 86 (331)
+++..|||=+..+|+.|.++. . ..++|.-+...+++++.++.+..+ +.... .+...|.
T Consensus 7 iI~~yNRp~l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~----I~~~~~~d~~~~~~~~~N~g~~~y~~ 82 (343)
T 1fo8_A 7 LVIACDRSTVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSA----VTHIRQPDLSNIAVQPDHRKFQGYYK 82 (343)
T ss_dssp EEEESSCTTHHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGG----SEEEECSCCCCCCCCTTCGGGHHHHH
T ss_pred EEEECCcHHHHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCc----eEEEEcCCccccccchhhcCcccchh
Confidence 345578877999999999874 2 245555555557788888775421 22221 1112232
Q ss_pred -hHHHHHHHhhccC-CCCCcEEEEeCCeeccccHH
Q 020113 87 -AGPLALARDKLID-DSGEPFFVLNSDVISEYPLK 119 (331)
Q Consensus 87 -~~al~~~~~~~~~-~~~~~~lv~~~D~i~~~~l~ 119 (331)
+..+..++..+-. ...+.++++-.|++...++-
T Consensus 83 ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~ 117 (343)
T 1fo8_A 83 IARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFF 117 (343)
T ss_dssp HHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHH
T ss_pred HhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHH
Confidence 1334444444321 11238999999999888743
No 190
>3vdp_A Recombination protein RECR; zinc finger, DNA repair, DNA binding; 2.45A {Thermoanaerobacter tengcongensis} PDB: 3vdu_A 3ve5_D
Probab=47.94 E-value=1e+02 Score=24.72 Aligned_cols=53 Identities=26% Similarity=0.355 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHcCCCEEEEEeccCh--HHHHHHHHHhhhccCeEEEEeeCCcccC
Q 020113 33 MILHQIEALKAVGVTEVVLAINYQP--EVMLNFLKEFEKKLEIKITCSQETEPLG 85 (331)
Q Consensus 33 li~~~l~~l~~~gi~~i~iv~~~~~--~~i~~~~~~~~~~~~~~v~~~~~~~~~G 85 (331)
-|+..++.+...++++|++.+++.- +....|+.+.-+.++++++-+...-|.|
T Consensus 137 ~i~~L~~Ri~~~~v~EVIlAtnpTvEGeaTa~Yi~~~Lk~~~vkvTRiA~GiPvG 191 (212)
T 3vdp_A 137 RIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVG 191 (212)
T ss_dssp THHHHHHHHHHSCCSEEEECCCSSHHHHHHHHHHHHHHTTTTCEEEECCBSBCTT
T ss_pred CHHHHHHHHhcCCCcEEEEECCCCccHHHHHHHHHHHhhhcCCCeeeccccCcCC
Confidence 5788888888888999999999774 6788888887666788887666555544
No 191
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=44.28 E-value=1.2e+02 Score=24.18 Aligned_cols=93 Identities=12% Similarity=0.146 Sum_probs=45.0
Q ss_pred CeEEEEeCCCCcccCCCCCCCCCCCceeCCcchHHHHHHHHHHc--CCCEEEEEeccChHHHHHHHHHhhhccCeEEEEe
Q 020113 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAV--GVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCS 78 (331)
Q Consensus 1 m~avIlA~G~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~--gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~ 78 (331)
|+..||+.|.|+.| +.+++.+.+- +.+-+.|+++++.....++ ..+.++++...
T Consensus 1 ~riaVl~SG~Gs~L--------------------~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~----A~~~gIp~~~~ 56 (209)
T 1meo_A 1 ARVAVLISGTGSNL--------------------QALIDSTREPNSSAQIDIVISNKAAVAGLDK----AERAGIPTRVI 56 (209)
T ss_dssp CEEEEEESSSCTTH--------------------HHHHHHHHSTTCSCEEEEEEESSTTCHHHHH----HHHTTCCEEEC
T ss_pred CeEEEEEECCchHH--------------------HHHHHHHhcCCCCcEEEEEEeCCCChHHHHH----HHHcCCCEEEE
Confidence 46778888888655 3444544442 3333445555544333322 33346666443
Q ss_pred eCCcccCC----hHHHHHHHhhccCCCCCcEEEEeCCe-eccccHHHHHHHH
Q 020113 79 QETEPLGT----AGPLALARDKLIDDSGEPFFVLNSDV-ISEYPLKQMIEFH 125 (331)
Q Consensus 79 ~~~~~~G~----~~al~~~~~~~~~~~~~~~lv~~~D~-i~~~~l~~~l~~~ 125 (331)
.. ....+ -..+...+...+. +++|+.|=. +.. ..+++.+
T Consensus 57 ~~-~~~~~r~~~~~~~~~~l~~~~~----Dliv~a~y~~il~---~~~l~~~ 100 (209)
T 1meo_A 57 NH-KLYKNRVEFDSAIDLVLEEFSI----DIVCLAGFMRILS---GPFVQKW 100 (209)
T ss_dssp CG-GGSSSHHHHHHHHHHHHHHTTC----CEEEEESCCSCCC---HHHHHHT
T ss_pred Cc-cccCchhhhhHHHHHHHHhcCC----CEEEEcchhhhCC---HHHHhhh
Confidence 32 22222 1234444444433 677777644 444 3444443
No 192
>3qd7_X Uncharacterized protein YDAL; alpha/beta/alpha fold, endonuclease, hydrolase; 2.30A {Escherichia coli}
Probab=41.82 E-value=60 Score=24.06 Aligned_cols=58 Identities=9% Similarity=0.214 Sum_probs=39.8
Q ss_pred CCCCceeCCc------chHHHHHHHHHHcCCCEEEEEeccChH------HHHHHHHHhhhccCeEEEEee
Q 020113 22 PKPLVDFANK------PMILHQIEALKAVGVTEVVLAINYQPE------VMLNFLKEFEKKLEIKITCSQ 79 (331)
Q Consensus 22 pK~llpi~g~------pli~~~l~~l~~~gi~~i~iv~~~~~~------~i~~~~~~~~~~~~~~v~~~~ 79 (331)
|..-+.+-|. ..|+..|+.....|+..+.|+.+.... .+++.+.+|-++.+.-..|..
T Consensus 46 ~~~~LDLHG~~~~EA~~~L~~fL~~a~~~g~r~V~IIHGKG~gs~~~~~vLk~~V~~wL~~~~~V~~f~~ 115 (137)
T 3qd7_X 46 QQASLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRDDKSHANIVRSYVARWLTEFDDVQAYCT 115 (137)
T ss_dssp GGGEEECTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCSSTTSHHHHHHHHHHHHHHTSTTEEEEEE
T ss_pred CCeEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCchHHHHHHHHHHHhcCCceeEEee
Confidence 4445555554 357777777888899999999986643 788888888766553344444
No 193
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=41.35 E-value=80 Score=25.34 Aligned_cols=41 Identities=12% Similarity=0.167 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHcCC-CEE-EEEeccChHHHHHHHHHhhhccCeEEEE
Q 020113 33 MILHQIEALKAVGV-TEV-VLAINYQPEVMLNFLKEFEKKLEIKITC 77 (331)
Q Consensus 33 li~~~l~~l~~~gi-~~i-~iv~~~~~~~i~~~~~~~~~~~~~~v~~ 77 (331)
.+..+++.+.+.+. -+| .|++++......++. .+.++++..
T Consensus 14 ~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A----~~~gIp~~~ 56 (216)
T 2ywr_A 14 NLQAIIDAIESGKVNASIELVISDNPKAYAIERC----KKHNVECKV 56 (216)
T ss_dssp HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHH----HHHTCCEEE
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHH----HHcCCCEEE
Confidence 44556666666554 144 455554443333333 334666644
No 194
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=40.84 E-value=48 Score=26.72 Aligned_cols=19 Identities=16% Similarity=0.135 Sum_probs=10.3
Q ss_pred cEEEEeCCe-eccccHHHHHHHH
Q 020113 104 PFFVLNSDV-ISEYPLKQMIEFH 125 (331)
Q Consensus 104 ~~lv~~~D~-i~~~~l~~~l~~~ 125 (331)
+++|+.+=. +.. +.+++.+
T Consensus 85 Dliv~agy~~il~---~~~l~~~ 104 (215)
T 3tqr_A 85 KLIVLAGFMRKLG---KAFVSHY 104 (215)
T ss_dssp SEEEESSCCSCCC---HHHHHHT
T ss_pred CEEEEccchhhCC---HHHHhhc
Confidence 677776643 444 3444443
No 195
>2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A
Probab=40.27 E-value=29 Score=26.00 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=33.1
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+++..+++.+.|+.++.+.+..+...-..+.++.
T Consensus 76 G~~Ll~~a~~~a~~~G~~rv~L~~~~~N~~a~~fye~~ 113 (141)
T 2d4p_A 76 LRGLLRAVVKSAYDAGVYEVALHLDPERKELEEALKAE 113 (141)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEecccCHHHHHHHHHC
Confidence 56799999999999999999999988877777777763
No 196
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=38.06 E-value=34 Score=27.62 Aligned_cols=19 Identities=16% Similarity=0.079 Sum_probs=9.7
Q ss_pred cEEEEeCCe-eccccHHHHHHHH
Q 020113 104 PFFVLNSDV-ISEYPLKQMIEFH 125 (331)
Q Consensus 104 ~~lv~~~D~-i~~~~l~~~l~~~ 125 (331)
+++++.|=. +.. ..+++.+
T Consensus 91 Dlivlagy~~iL~---~~~l~~~ 110 (215)
T 3da8_A 91 DLVVSAGFMRILG---PQFLSRF 110 (215)
T ss_dssp SEEEEEECCSCCC---HHHHHHH
T ss_pred CEEEEcCchhhCC---HHHHhhc
Confidence 666666543 444 3444444
No 197
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=37.28 E-value=1.1e+02 Score=21.82 Aligned_cols=58 Identities=17% Similarity=0.281 Sum_probs=36.2
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEec-----cCh-HHHHHHHHHhhhccCeEEEEeeCCcccCChHHH
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAIN-----YQP-EVMLNFLKEFEKKLEIKITCSQETEPLGTAGPL 90 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~-----~~~-~~i~~~~~~~~~~~~~~v~~~~~~~~~G~~~al 90 (331)
+.|-++..++.|...|+++++++-- .+. .++...+..+..+++.++.+. .+.|.-..+
T Consensus 46 ~~P~l~~~l~~l~~~G~~~vvvvPlfl~~G~H~~~Dip~~~~~~~~~~~~~i~~~---~~LG~~p~l 109 (126)
T 3lyh_A 46 AEPSLDTIVNRAKGQGVEQFTVVPLFLAAGRHLRKDVPAMIERLEAEHGVTIRLA---EPIGKNPRL 109 (126)
T ss_dssp SSSBHHHHHHHHHHTTCCEEEEEECCSCCCHHHHHHHHHHHHHHHHHHTCEEEEC---CCGGGSHHH
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEecccCCCchhhhHHHHHHHHHHHHhCceEEEc---CCCCCChHH
Confidence 6799999999999999999887742 222 455555555544445555332 345544433
No 198
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Probab=36.31 E-value=42 Score=24.40 Aligned_cols=38 Identities=16% Similarity=0.251 Sum_probs=30.0
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|++++++.+.+.|+.++.+.+......-..+.++.
T Consensus 99 G~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~ 136 (150)
T 2dxq_A 99 GRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESC 136 (150)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeCCCChHHHHHHHHc
Confidence 56799999999999999999998877665555565554
No 199
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=32.02 E-value=1.6e+02 Score=23.83 Aligned_cols=84 Identities=8% Similarity=0.049 Sum_probs=41.5
Q ss_pred Cc-chHHHHHHHHHHcCC-CEE-EEEeccChHHHHHHHHHhhhccCeEEEEeeCCcccCC----hHHHHHHHhhccCCCC
Q 020113 30 NK-PMILHQIEALKAVGV-TEV-VLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGT----AGPLALARDKLIDDSG 102 (331)
Q Consensus 30 g~-pli~~~l~~l~~~gi-~~i-~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~G~----~~al~~~~~~~~~~~~ 102 (331)
|. ..+..+++.+.+... -+| .|+++.......+ +..+.++++..... ....+ -..+...+...+.
T Consensus 31 G~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~----~A~~~gIp~~~~~~-~~~~~r~~~~~~~~~~l~~~~~--- 102 (229)
T 3auf_A 31 GSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLE----RARRAGVDALHMDP-AAYPSRTAFDAALAERLQAYGV--- 102 (229)
T ss_dssp SCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHH----HHHHTTCEEEECCG-GGSSSHHHHHHHHHHHHHHTTC---
T ss_pred CCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHH----HHHHcCCCEEEECc-ccccchhhccHHHHHHHHhcCC---
Confidence 54 578888888887632 244 4555533333322 33445677654332 22222 1234444444433
Q ss_pred CcEEEEeCCe-eccccHHHHHHHH
Q 020113 103 EPFFVLNSDV-ISEYPLKQMIEFH 125 (331)
Q Consensus 103 ~~~lv~~~D~-i~~~~l~~~l~~~ 125 (331)
+++|+.|=. +.. ..+++.+
T Consensus 103 -Dliv~agy~~IL~---~~~l~~~ 122 (229)
T 3auf_A 103 -DLVCLAGYMRLVR---GPMLTAF 122 (229)
T ss_dssp -SEEEESSCCSCCC---HHHHHHS
T ss_pred -CEEEEcChhHhCC---HHHHhhc
Confidence 677777654 444 3444443
No 200
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A}
Probab=30.73 E-value=58 Score=23.33 Aligned_cols=38 Identities=11% Similarity=0.263 Sum_probs=29.1
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|++++++.+.+.|+..+.+.+.........++.+.
T Consensus 87 G~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~a~~~Y~k~ 124 (144)
T 2pdo_A 87 ANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYERL 124 (144)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHHc
Confidence 56799999999999999999987766555555565654
No 201
>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*
Probab=29.85 E-value=58 Score=24.29 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=29.1
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|++++++.+.+.|+..+.+.+......-..+.++.
T Consensus 106 G~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~ 143 (170)
T 2bei_A 106 GSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKAL 143 (170)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEeccCHHHHHHHHHC
Confidence 56799999999999999999988876654455555553
No 202
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=29.41 E-value=1.7e+02 Score=25.24 Aligned_cols=91 Identities=11% Similarity=-0.019 Sum_probs=50.7
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccCh-HHHHHHHHHhhhccCeEEEEeeCCcccCChHHHHHHHhhccCCCCCcEEEE
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQP-EVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVL 108 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~-~~i~~~~~~~~~~~~~~v~~~~~~~~~G~~~al~~~~~~~~~~~~~~~lv~ 108 (331)
|+-.++.+-+.+.+.|.++++|+++... +...+.+.+..+..+.++..... .+.++.+.+..+ +.+..... +++|.
T Consensus 18 G~g~~~~l~~~l~~~g~~~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~-~~~~~~~~v~~~-~~~~~~~~-d~IIa 94 (354)
T 3ce9_A 18 GNNKIYNIGQIIKKGNFKRVSLYFGEGIYELFGETIEKSIKSSNIEIEAVET-VKNIDFDEIGTN-AFKIPAEV-DALIG 94 (354)
T ss_dssp ESSCGGGHHHHHGGGTCSEEEEEEETTHHHHHHHHHHHHHHTTTCEEEEEEE-ECCCBHHHHHHH-HTTSCTTC-CEEEE
T ss_pred CCCHHHHHHHHHHhcCCCeEEEEECccHHHHHHHHHHHHHHHcCCeEEEEec-CCCCCHHHHHHH-HHhhhcCC-CEEEE
Confidence 4445555556666677789999998664 22333333322333445443332 344578888888 77765443 56664
Q ss_pred eCC-eeccccHHHHHHHH
Q 020113 109 NSD-VISEYPLKQMIEFH 125 (331)
Q Consensus 109 ~~D-~i~~~~l~~~l~~~ 125 (331)
-|- .+. |...++...
T Consensus 95 vGGGsv~--D~aK~vA~~ 110 (354)
T 3ce9_A 95 IGGGKAI--DAVKYMAFL 110 (354)
T ss_dssp EESHHHH--HHHHHHHHH
T ss_pred ECChHHH--HHHHHHHhh
Confidence 433 333 355566643
No 203
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=28.79 E-value=1.1e+02 Score=21.90 Aligned_cols=38 Identities=16% Similarity=0.091 Sum_probs=30.3
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+-|+.+.++.+.+.|+..+.+.+.........++.+.
T Consensus 106 g~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~ 143 (164)
T 4e0a_A 106 GRLIFEAIISYGKAHQVDAIELDVYDFNDRAKAFYHSL 143 (164)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEEcCCHHHHHHHHHc
Confidence 56799999999999999999998876665566666664
No 204
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=28.04 E-value=65 Score=23.61 Aligned_cols=38 Identities=11% Similarity=0.021 Sum_probs=30.1
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+.
T Consensus 113 g~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~ 150 (166)
T 4evy_A 113 ATMLIRQAEVWAKQFSCTEFASDAALDNVISHAMHRSL 150 (166)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHc
Confidence 46799999999999999999998877665556666654
No 205
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=27.95 E-value=68 Score=23.35 Aligned_cols=38 Identities=11% Similarity=0.041 Sum_probs=30.0
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+..+......++.+.
T Consensus 113 g~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~ 150 (165)
T 1s3z_A 113 AKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQAL 150 (165)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEecCcCCHHHHHHHHHc
Confidence 46799999999999999999998877665556666654
No 206
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}
Probab=27.34 E-value=74 Score=22.91 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=29.8
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.+.++.+.+.|+..+.+.+.........++.+.
T Consensus 91 g~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~ 128 (160)
T 3f8k_A 91 GTLLVKTLIEEAKKSGLSTVKFYTLPENTPMIKIGRKL 128 (160)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCceEEEEEEcccCHHHHHHHHHc
Confidence 56799999999988999999998877665555566653
No 207
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Probab=27.30 E-value=68 Score=24.13 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=29.3
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|++++++.+...|+..+.+-+......-..+.++.
T Consensus 108 G~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~ 145 (180)
T 1tiq_A 108 GKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKM 145 (180)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEehhcCHHHHHHHHHc
Confidence 56899999999999999999998866555455555553
No 208
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=27.05 E-value=1.7e+02 Score=23.25 Aligned_cols=81 Identities=6% Similarity=0.012 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHcCC-CEEE-EEeccChHHHHHHHHHhhhccCeEEEEeeCCcccCCh----HHHHHHHhhccCCCCCcEE
Q 020113 33 MILHQIEALKAVGV-TEVV-LAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTA----GPLALARDKLIDDSGEPFF 106 (331)
Q Consensus 33 li~~~l~~l~~~gi-~~i~-iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~G~~----~al~~~~~~~~~~~~~~~l 106 (331)
.+..+++.+.+..+ -+|. |++++......++ ..+.++++..... ....+- ..+...+...+. +++
T Consensus 16 ~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~----A~~~gIp~~~~~~-~~~~~~~~~~~~~~~~l~~~~~----Dli 86 (212)
T 3av3_A 16 NFQAIVDAAKRGDLPARVALLVCDRPGAKVIER----AARENVPAFVFSP-KDYPSKAAFESEILRELKGRQI----DWI 86 (212)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHH----HHHTTCCEEECCG-GGSSSHHHHHHHHHHHHHHTTC----CEE
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHH----HHHcCCCEEEeCc-ccccchhhhHHHHHHHHHhcCC----CEE
Confidence 55666777766532 2444 5555333333333 3345666644332 221221 234444444433 677
Q ss_pred EEeCCe-eccccHHHHHHHH
Q 020113 107 VLNSDV-ISEYPLKQMIEFH 125 (331)
Q Consensus 107 v~~~D~-i~~~~l~~~l~~~ 125 (331)
|+.|=. +.. ..+++.+
T Consensus 87 v~a~y~~il~---~~~l~~~ 103 (212)
T 3av3_A 87 ALAGYMRLIG---PTLLSAY 103 (212)
T ss_dssp EESSCCSCCC---HHHHHHT
T ss_pred EEchhhhhCC---HHHHhhh
Confidence 777643 444 3444443
No 209
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=26.61 E-value=3.3e+02 Score=24.01 Aligned_cols=85 Identities=12% Similarity=0.070 Sum_probs=48.6
Q ss_pred CEEEEEeccChHHHHHHHHHhh---h-ccCeEEEEeeCC--c--ccCChHHHHHHH----hhccCCCCCcEEEEeCCee-
Q 020113 47 TEVVLAINYQPEVMLNFLKEFE---K-KLEIKITCSQET--E--PLGTAGPLALAR----DKLIDDSGEPFFVLNSDVI- 113 (331)
Q Consensus 47 ~~i~iv~~~~~~~i~~~~~~~~---~-~~~~~v~~~~~~--~--~~G~~~al~~~~----~~~~~~~~~~~lv~~~D~i- 113 (331)
-+|+||=+...+...+.++++. . ..+.++...... . ..|-+.++..++ ..... |-++++.+|.-
T Consensus 29 ~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~~G~~~Al~~a~g---d~vv~mDADlq~ 105 (397)
T 2bo4_A 29 VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQW---ERIHFYDADITS 105 (397)
T ss_dssp CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHHHHHHHHHCCC---SEEEECCTTCSS
T ss_pred eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHHHHHHHHHHhCCC---CEEEEEcCCCCC
Confidence 3565554333344444444211 1 234454433322 2 468999999999 44433 27778999984
Q ss_pred -ccccHHHHHHHHhhcCCceEEE
Q 020113 114 -SEYPLKQMIEFHRGRGGEASIM 135 (331)
Q Consensus 114 -~~~~l~~~l~~~~~~~~~~~i~ 135 (331)
-+..+.++++...+ +++.++.
T Consensus 106 ~~P~~i~~Ll~~l~~-g~D~V~g 127 (397)
T 2bo4_A 106 FGPDWITKAEEAADF-GYGLVRH 127 (397)
T ss_dssp CCHHHHHHHHHHHHT-TCSEEEE
T ss_pred CCHHHHHHHHHHHHc-CCCEEEE
Confidence 44568888887644 5665554
No 210
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=26.13 E-value=69 Score=23.09 Aligned_cols=38 Identities=3% Similarity=0.042 Sum_probs=29.9
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.+.++.+...|+..+.+.+.........++.+.
T Consensus 92 g~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~ 129 (162)
T 3lod_A 92 GEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRN 129 (162)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHc
Confidence 56799999999999999999998876665555566653
No 211
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=26.02 E-value=42 Score=29.71 Aligned_cols=89 Identities=10% Similarity=0.066 Sum_probs=48.5
Q ss_pred CCCceeCCcc---hHHHHHHHHHHcCCCEEEEEeccChH-HHHHHHHHhhhccCe-EEEEeeCCcccC----ChHHHHHH
Q 020113 23 KPLVDFANKP---MILHQIEALKAVGVTEVVLAINYQPE-VMLNFLKEFEKKLEI-KITCSQETEPLG----TAGPLALA 93 (331)
Q Consensus 23 K~llpi~g~p---li~~~l~~l~~~gi~~i~iv~~~~~~-~i~~~~~~~~~~~~~-~v~~~~~~~~~G----~~~al~~~ 93 (331)
|.+.-+|-|| .+..+++.|.+. ++.++++++.+.+ .+.+.+.+ .+++ +..+.......+ ++..+...
T Consensus 11 ~~~~v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~---~~~i~~~~~~l~~~~~~~~~~~~~~~~~l 86 (385)
T 4hwg_A 11 KVMTIVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFD---DMGIRKPDYFLEVAADNTAKSIGLVIEKV 86 (385)
T ss_dssp EEEEEECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC----CCCCCCSEECCCCCCCSHHHHHHHHHHH
T ss_pred heeEEEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHh---hCCCCCCceecCCCCCCHHHHHHHHHHHH
Confidence 3333345666 777778888877 8889999987764 44443322 2222 111111111112 22334444
Q ss_pred HhhccCCCCCcEEEEeCCeeccc
Q 020113 94 RDKLIDDSGEPFFVLNSDVISEY 116 (331)
Q Consensus 94 ~~~~~~~~~~~~lv~~~D~i~~~ 116 (331)
.+.+....+ +++++.||.....
T Consensus 87 ~~~l~~~kP-D~Vlv~gd~~~~~ 108 (385)
T 4hwg_A 87 DEVLEKEKP-DAVLFYGDTNSCL 108 (385)
T ss_dssp HHHHHHHCC-SEEEEESCSGGGG
T ss_pred HHHHHhcCC-cEEEEECCchHHH
Confidence 445555555 8999999986544
No 212
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=25.49 E-value=88 Score=25.86 Aligned_cols=44 Identities=7% Similarity=0.228 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHhhhcc-CeEEE
Q 020113 33 MILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKL-EIKIT 76 (331)
Q Consensus 33 li~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~-~~~v~ 76 (331)
++.-+++.|.+.|+++++++-++..+.+....+++..++ +..+.
T Consensus 98 ~l~di~~sl~~~G~rrlvivNgHGGN~l~~a~~~l~~~~~~~~v~ 142 (254)
T 3lub_A 98 ILEDIVSSLHVQGFRKLLILSGHGGNNFKGMIRDLAFEYPDFLIA 142 (254)
T ss_dssp HHHHHHHHHHHTTCCEEEEEESCTTCCCHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCchHHHHHHHHHHHHHCCCcEEE
Confidence 556677888899999999998876644666666655554 45443
No 213
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=25.15 E-value=53 Score=25.22 Aligned_cols=38 Identities=13% Similarity=0.122 Sum_probs=30.2
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|++++++.+.+.|+..+.+.+......-..+.+++
T Consensus 130 G~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~ 167 (199)
T 1u6m_A 130 GSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASK 167 (199)
T ss_dssp HHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHC
Confidence 56899999999999999999998876665555565553
No 214
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str}
Probab=24.98 E-value=79 Score=23.23 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=29.5
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.++
T Consensus 121 g~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~ 158 (179)
T 2oh1_A 121 SKQMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRY 158 (179)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEecCCcHHHHHHHHHC
Confidence 56799999999988899999988876665555566653
No 215
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=23.71 E-value=84 Score=22.43 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=29.8
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+.
T Consensus 86 g~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~ 123 (157)
T 1mk4_A 86 GKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKL 123 (157)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHc
Confidence 56799999999998999999998877665555666653
No 216
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=23.50 E-value=49 Score=23.89 Aligned_cols=37 Identities=22% Similarity=0.288 Sum_probs=26.3
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHH
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~ 66 (331)
|+.|+.++++.+.+.|+..+.+.+......-..++++
T Consensus 103 G~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k 139 (153)
T 1z4e_A 103 GSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQ 139 (153)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEccCChHHHHHHHH
Confidence 5678999999888888888888776544334444444
No 217
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=23.47 E-value=82 Score=22.90 Aligned_cols=38 Identities=21% Similarity=0.291 Sum_probs=29.4
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+...|+.++.+.+......-..++.+.
T Consensus 99 g~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~ 136 (169)
T 3g8w_A 99 NRELINHIIQYAKEQNIETLMIAIASNNISAKVFFSSI 136 (169)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHc
Confidence 56799999999998999999988876665555565553
No 218
>2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=23.27 E-value=84 Score=22.42 Aligned_cols=38 Identities=11% Similarity=0.056 Sum_probs=29.6
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+.
T Consensus 93 g~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~ 130 (162)
T 2fia_A 93 GSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESK 130 (162)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHC
Confidence 45799999999998899999998876665556666553
No 219
>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=23.19 E-value=79 Score=23.25 Aligned_cols=38 Identities=8% Similarity=0.189 Sum_probs=29.5
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+.++.+.+......-..++++.
T Consensus 99 G~~ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Yek~ 136 (166)
T 2ae6_A 99 GGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKH 136 (166)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeecCCHHHHHHHHHc
Confidence 56799999999988999999998876665555565553
No 220
>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp}
Probab=23.10 E-value=95 Score=22.21 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=28.2
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHH
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~ 66 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+
T Consensus 96 g~~ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k 132 (163)
T 3d8p_A 96 GKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSN 132 (163)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCeEEEEEecCCCHHHHHHHHH
Confidence 4569999999998899999999887665555555555
No 221
>2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A*
Probab=22.64 E-value=95 Score=22.38 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=29.8
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+.
T Consensus 106 g~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~ 143 (174)
T 2cy2_A 106 GRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHL 143 (174)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEECCChhHHHHHHHc
Confidence 46799999999999999999998876665556666654
No 222
>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A*
Probab=22.51 E-value=96 Score=22.34 Aligned_cols=38 Identities=13% Similarity=0.257 Sum_probs=30.0
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+.
T Consensus 100 g~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~ 137 (174)
T 3dr6_A 100 GRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSL 137 (174)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHhC
Confidence 56799999999988999999988876665566666664
No 223
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Probab=22.19 E-value=1e+02 Score=22.17 Aligned_cols=38 Identities=5% Similarity=0.088 Sum_probs=29.5
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+.
T Consensus 106 g~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~ 143 (166)
T 2fe7_A 106 GRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSI 143 (166)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEccCCHHHHHHHHHc
Confidence 46799999999998899999988876665556666654
No 224
>2dcl_A Hypothetical UPF0166 protein PH1503; hexamer, structural genomics, NPPSFA, national project on PR structural and functional analyses; HET: AMP; 2.28A {Pyrococcus horikoshii}
Probab=21.85 E-value=88 Score=22.82 Aligned_cols=27 Identities=15% Similarity=0.399 Sum_probs=23.0
Q ss_pred eCCcchHHHHHHHHHHcCCCEEEEEec
Q 020113 28 FANKPMILHQIEALKAVGVTEVVLAIN 54 (331)
Q Consensus 28 i~g~pli~~~l~~l~~~gi~~i~iv~~ 54 (331)
..|+||.+++++.+.++|+.-.++.-+
T Consensus 22 ~~g~pL~~~Iv~~a~~~GiaGaTV~rg 48 (127)
T 2dcl_A 22 WEGRPLYKVIVEKLREMGIAGATVYRG 48 (127)
T ss_dssp ETTEEHHHHHHHHHHHTTCSCEEEEEC
T ss_pred cCCcCHHHHHHHHHHHCCCCeEEEEcC
Confidence 369999999999999999987777654
No 225
>2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP}
Probab=21.73 E-value=93 Score=22.57 Aligned_cols=38 Identities=5% Similarity=0.093 Sum_probs=29.6
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+.
T Consensus 115 g~~ll~~~~~~a~~~g~~~i~~~~~~~n~~a~~~y~k~ 152 (172)
T 2r1i_A 115 GSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEAR 152 (172)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHC
Confidence 56799999999999999999988876665555566553
No 226
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=21.68 E-value=71 Score=22.80 Aligned_cols=27 Identities=15% Similarity=0.250 Sum_probs=22.6
Q ss_pred eCCcchHHHHHHHHHHcCCCEEEEEec
Q 020113 28 FANKPMILHQIEALKAVGVTEVVLAIN 54 (331)
Q Consensus 28 i~g~pli~~~l~~l~~~gi~~i~iv~~ 54 (331)
..|+||.+++++.+.++|+.-.++.-+
T Consensus 26 ~~g~pL~~~Iv~~~~~~GiaGaTV~rg 52 (114)
T 1o51_A 26 HSGKPLFEYLVKRAYELGMKGVTVYRG 52 (114)
T ss_dssp ETTEEHHHHHHHHHHHTTCSCCEEEEC
T ss_pred cCCeEHHHHHHHHHHHCCCCeEEEEcC
Confidence 368999999999999999887776554
No 227
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=21.64 E-value=93 Score=27.38 Aligned_cols=89 Identities=13% Similarity=0.159 Sum_probs=47.9
Q ss_pred CceeCCcc---hHHHHHHHHHHc-CCCEEEEEeccChHHHHHHHHHhhhccCeEEEEeeCCcc--cCChHHHHHHHhhcc
Q 020113 25 LVDFANKP---MILHQIEALKAV-GVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEP--LGTAGPLALARDKLI 98 (331)
Q Consensus 25 llpi~g~p---li~~~l~~l~~~-gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~--~G~~~al~~~~~~~~ 98 (331)
++-.+-+| .+..+++.|.+. +++..+++++.+.+...+.+..++-.....+.+.....+ .-++..+....+.+.
T Consensus 29 ~~v~Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 108 (396)
T 3dzc_A 29 LIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQQVLS 108 (396)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 33334555 677788888886 577777888877654555555432111112211111111 112334445555555
Q ss_pred CCCCCcEEEEeCCeec
Q 020113 99 DDSGEPFFVLNSDVIS 114 (331)
Q Consensus 99 ~~~~~~~lv~~~D~i~ 114 (331)
...+ +++++.||...
T Consensus 109 ~~kP-DvVi~~g~~~~ 123 (396)
T 3dzc_A 109 SEQP-DVVLVHGDTAT 123 (396)
T ss_dssp HHCC-SEEEEETTSHH
T ss_pred hcCC-CEEEEECCchh
Confidence 5555 88898898754
No 228
>2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus}
Probab=21.17 E-value=1.1e+02 Score=22.56 Aligned_cols=38 Identities=8% Similarity=0.221 Sum_probs=29.2
Q ss_pred CcchHHHHHHHHHHc-CCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAV-GVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~-gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+. |+..+.+.+......-..++++.
T Consensus 105 G~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~A~~~Yek~ 143 (168)
T 2x7b_A 105 ATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKL 143 (168)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCeeEEEEEEEeCCHHHHHHHHHC
Confidence 567999999999988 99999998876655455555553
No 229
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A
Probab=21.10 E-value=88 Score=22.01 Aligned_cols=38 Identities=8% Similarity=0.063 Sum_probs=29.0
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+.
T Consensus 101 g~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~ 138 (152)
T 1qsm_A 101 GGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKV 138 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHc
Confidence 56799999999998899999888776655555566654
No 230
>3toe_A MTH10B, DNA/RNA-binding protein ALBA; SAC10B family, alpha/beta mixed, homodimer, unknown function; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=20.98 E-value=88 Score=21.38 Aligned_cols=31 Identities=26% Similarity=0.372 Sum_probs=24.4
Q ss_pred CceeCCcchHHHHHHHHHH--cCCCEEEEEecc
Q 020113 25 LVDFANKPMILHQIEALKA--VGVTEVVLAINY 55 (331)
Q Consensus 25 llpi~g~pli~~~l~~l~~--~gi~~i~iv~~~ 55 (331)
.+-+++||+..|++..+.. .|.+++.+-..-
T Consensus 6 vv~vg~Kpv~~YV~~~i~~~n~g~~eV~ikA~G 38 (91)
T 3toe_A 6 VVYIGNKPVMNYVLAVVTQMNGGTSEVILKARG 38 (91)
T ss_dssp CEECCSSCHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred EEEECCCcHHHHHHHHHHHHhCCCCEEEEEEeh
Confidence 4567899999999987765 478999987753
No 231
>1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1
Probab=20.48 E-value=1.1e+02 Score=21.91 Aligned_cols=37 Identities=16% Similarity=0.339 Sum_probs=28.6
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHH
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~ 66 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+
T Consensus 79 g~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k 115 (157)
T 1y9k_A 79 GKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQK 115 (157)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeCCCCHHHHHHHHH
Confidence 5679999999998889999998887665555555555
No 232
>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A*
Probab=20.39 E-value=95 Score=23.08 Aligned_cols=38 Identities=24% Similarity=0.328 Sum_probs=29.6
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+.
T Consensus 128 g~~Ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~ 165 (183)
T 3fix_A 128 GKTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKN 165 (183)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHHHc
Confidence 56799999999999999999998876665555565553
No 233
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=20.31 E-value=1.1e+02 Score=22.05 Aligned_cols=38 Identities=11% Similarity=0.131 Sum_probs=29.9
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+..+++.+...|+.++.+.+......-...+.+.
T Consensus 108 g~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~ 145 (164)
T 3eo4_A 108 GRHSVSLVLKWLKNIGYKKAHARILENNIRSIKLFESL 145 (164)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEeCCCCHHHHHHHHHC
Confidence 55799999999988899999999887766556666653
No 234
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=20.31 E-value=3.4e+02 Score=23.68 Aligned_cols=93 Identities=10% Similarity=0.019 Sum_probs=47.6
Q ss_pred CCcchHHHHHHHHHHcCCCEEEEEeccCh-HH---HHHHHHHhhhccCeEEEEeeCCcccCChHHHHHHHhhccCCCCCc
Q 020113 29 ANKPMILHQIEALKAVGVTEVVLAINYQP-EV---MLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEP 104 (331)
Q Consensus 29 ~g~pli~~~l~~l~~~gi~~i~iv~~~~~-~~---i~~~~~~~~~~~~~~v~~~~~~~~~G~~~al~~~~~~~~~~~~~~ 104 (331)
-|+-.++.+-+.+.+.|.++++|+++... +. +.+.+.+.-+..+.++.....-++.-+.+.+..+.+.+..... +
T Consensus 16 ~G~g~~~~l~~~l~~~g~~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~-d 94 (387)
T 3bfj_A 16 FGPNAISVVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQC-D 94 (387)
T ss_dssp ESTTGGGGHHHHHHHTTCSEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTC-C
T ss_pred ECCCHHHHHHHHHHHcCCCEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCC-C
Confidence 35545566666667778889999997542 22 2333332222234454333323333466677777776654433 5
Q ss_pred EEEEe-CCeeccccHHHHHHH
Q 020113 105 FFVLN-SDVISEYPLKQMIEF 124 (331)
Q Consensus 105 ~lv~~-~D~i~~~~l~~~l~~ 124 (331)
++|.- |-.+. |...++..
T Consensus 95 ~IIavGGGsv~--D~aK~iA~ 113 (387)
T 3bfj_A 95 IIVTVGGGSPH--DCGKGIGI 113 (387)
T ss_dssp EEEEEESHHHH--HHHHHHHH
T ss_pred EEEEeCCcchh--hHHHHHHH
Confidence 66644 33332 34444443
No 235
>2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V}
Probab=20.25 E-value=1e+02 Score=23.00 Aligned_cols=37 Identities=14% Similarity=0.116 Sum_probs=28.4
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHH
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~ 66 (331)
|+.|+.++++.+.+.|+..+.+.+.........++++
T Consensus 115 g~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k 151 (181)
T 2q7b_A 115 GRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYEN 151 (181)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHH
Confidence 3579999999998899999999887665555555555
No 236
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A*
Probab=20.23 E-value=1.2e+02 Score=22.00 Aligned_cols=38 Identities=16% Similarity=0.346 Sum_probs=29.2
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+.
T Consensus 81 g~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~ 118 (160)
T 2cnt_A 81 GRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESL 118 (160)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEEecCCHHHHHHHHHC
Confidence 56799999999988999999988876655555566654
No 237
>3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis}
Probab=20.19 E-value=1.1e+02 Score=22.74 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=29.6
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEeccChHHHHHHHHHh
Q 020113 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (331)
Q Consensus 30 g~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~ 67 (331)
|+.|+.++++.+.+.|+..+.+.+.........++.+.
T Consensus 118 g~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~ 155 (187)
T 3pp9_A 118 GKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKC 155 (187)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHC
Confidence 56799999999988999999998877665555565553
Done!