Query 020114
Match_columns 331
No_of_seqs 260 out of 807
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 12:00:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020114.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020114hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vjla_ d.257.1.1 (A:) Hypothe 100.0 1.4E-37 1E-41 269.4 17.3 130 130-260 9-144 (151)
2 d1e52a_ a.2.9.1 (A:) C-termina 97.8 8.5E-06 6.2E-10 58.4 4.0 37 289-325 15-52 (56)
3 d2fzta1 a.46.3.1 (A:1-78) Hypo 34.7 22 0.0016 25.5 4.2 27 292-318 2-29 (78)
4 d1ju3a2 c.69.1.21 (A:5-351) Ba 24.0 22 0.0016 29.8 3.1 33 110-147 7-39 (347)
5 d1fpoa2 a.23.1.1 (A:77-171) HS 17.4 88 0.0064 22.2 4.9 21 294-314 50-71 (95)
6 d2b9va2 c.69.1.21 (A:50-434) A 14.9 44 0.0032 28.8 3.0 31 110-145 30-60 (385)
7 d1fd3a_ g.9.1.1 (A:) Beta-defe 14.5 18 0.0013 23.0 0.2 17 7-25 17-33 (41)
8 d1yzma1 a.2.19.1 (A:456-501) F 14.2 1.6E+02 0.011 19.0 5.0 36 290-325 5-41 (46)
9 d2p06a1 a.204.1.3 (A:1-84) Hyp 13.2 58 0.0042 22.9 2.6 21 298-321 49-70 (84)
10 d2c1xa1 c.87.1.10 (A:7-456) UD 12.8 89 0.0065 26.1 4.4 80 209-319 337-424 (450)
No 1
>d1vjla_ d.257.1.1 (A:) Hypothetical protein TM0160 {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=1.4e-37 Score=269.39 Aligned_cols=130 Identities=24% Similarity=0.352 Sum_probs=118.3
Q ss_pred CccCCCCCCCcEEEEEeeCCCceEEEEEEChHHHHHHHHHHcccCCCCCChhHHHHHHHHHhCCeEeEEEEEeeECCEEE
Q 020114 130 GGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMRNVQIARPTLYQVVKEMIEKMGYEVRLVRVTKRVHEAYF 209 (331)
Q Consensus 130 ~gaLd~~a~~pvIVL~~edg~~r~LPI~Ig~~EA~aI~~aL~~~~~~RPlThDLL~eiLe~lg~~v~~V~I~~l~dGvFy 209 (331)
+-+++..+++|+|||++++++ +.||||||..||++|+.++++.+++||+|||||.++++++|+++.+|+|+++++|+||
T Consensus 9 ~i~~~~~~~~pvvlL~~~~~~-~~LPI~Ig~~EA~~I~~~l~~~~~~RP~thDLl~~~l~~lg~~v~~V~I~~~~dg~fy 87 (151)
T d1vjla_ 9 TLALDRVSNTPVVILGIEGTN-RVLPIWIGACEGHALALAMEKMEFPRPLTHDLLLSVLESLEARVDKVIIHSLKDNTFY 87 (151)
T ss_dssp EEEECTTTCCEEEEEEETTSS-EEEEEECCHHHHHHHHHHHHTCCCSSCCHHHHHHHHHHHTTEEEEEEEEEEEETTEEE
T ss_pred EEEEecCCCCcEEEEEECCCC-eEEEEEEChHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhCCEEEEEEEEEEecCCeE
Confidence 445677788999999998776 8999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeecCc------cceEEEEeCChHHHHHHHHHcCCCEEEehhhHhhcCeeeee
Q 020114 210 AQLYLTKVGN------ETECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIE 260 (331)
Q Consensus 210 A~L~l~~~g~------~~e~~~IDaRPSDAIaLAlR~k~PIyV~eeVl~~agi~v~e 260 (331)
|+|+++++.. +++.+++||||||||+||+|+++||||+++|++++|+.+..
T Consensus 88 A~L~l~~~~~~~~~~~~~~~~~iDaRPSDAIaLAlr~~~PI~v~~~Vl~~a~i~~~~ 144 (151)
T d1vjla_ 88 ATLVIRDLTYTDEEDEEAALIDIDSRPSDAIILAVKTGAPIFVSDNLVEKHSIELEV 144 (151)
T ss_dssp EEEEEEECC--------CCEEEEEECHHHHHHHHHHHTCCEEEEHHHHHHHCEECCH
T ss_pred EEEEEecCcccccccccCceeEeccChhHHHHHHHhhCCCEEEcHHHHHhcCCCCCc
Confidence 9999976421 23678999999999999999999999999999999997653
No 2
>d1e52a_ a.2.9.1 (A:) C-terminal UvrC-binding domain of UvrB {Escherichia coli [TaxId: 562]}
Probab=97.78 E-value=8.5e-06 Score=58.43 Aligned_cols=37 Identities=24% Similarity=0.368 Sum_probs=32.5
Q ss_pred chhhHHHHHHHHHHHHH-hhhHHHHHHHHHHHhHHhhh
Q 020114 289 DTKEFNLVRNMLIAAVE-ERYRDAAQWRDKLGQLRAKR 325 (331)
Q Consensus 289 ~~~e~~~L~~~L~~aie-E~YE~AA~lRDeI~~l~~~~ 325 (331)
..+.++.|++.|.+|.+ .+||+||.|||+|+.|++..
T Consensus 15 l~k~i~~Le~~M~~aa~~l~FE~AA~~RD~I~~l~~~l 52 (56)
T d1e52a_ 15 LQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELF 52 (56)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Confidence 35678899999999988 99999999999999998753
No 3
>d2fzta1 a.46.3.1 (A:1-78) Hypothetical protein TM0693 {Thermotoga maritima [TaxId: 2336]}
Probab=34.66 E-value=22 Score=25.49 Aligned_cols=27 Identities=19% Similarity=0.266 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHHH-hhhHHHHHHHHHH
Q 020114 292 EFNLVRNMLIAAVE-ERYRDAAQWRDKL 318 (331)
Q Consensus 292 e~~~L~~~L~~aie-E~YE~AA~lRDeI 318 (331)
.+.++......||+ |+||.--.|=|+=
T Consensus 2 ~I~EiErkIDeaIE~EDyE~L~~LL~kR 29 (78)
T d2fzta1 2 NIDEIERKIDEAIEKEDYETLLSLLNKR 29 (78)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 35778899999999 9999866664443
No 4
>d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]}
Probab=24.04 E-value=22 Score=29.78 Aligned_cols=33 Identities=27% Similarity=0.536 Sum_probs=22.6
Q ss_pred ceeEEeecCceeeeeecCCCCccCCCCCCCcEEEEEee
Q 020114 110 GFMIKMRDGRHLRCVHNNPQGGHLPDYAPHPAIVLKME 147 (331)
Q Consensus 110 ~~~~~~~~~~~l~~~~s~~q~gaLd~~a~~pvIVL~~e 147 (331)
..+|.||||-.|.+.--.|.++ .+.|+||....
T Consensus 7 ~v~ipmrDGv~L~~~vy~P~~~-----~~~P~il~~~p 39 (347)
T d1ju3a2 7 NVMVPMRDGVRLAVDLYRPDAD-----GPVPVLLVRNP 39 (347)
T ss_dssp EEEEECTTSCEEEEEEEEECCS-----SCEEEEEEEES
T ss_pred CeEEECCCCCEEEEEEEEcCCC-----CCEEEEEEEcC
Confidence 5789999999999775555321 35566766544
No 5
>d1fpoa2 a.23.1.1 (A:77-171) HSC20 (HSCB), C-terminal oligomerisation domain {Escherichia coli [TaxId: 562]}
Probab=17.36 E-value=88 Score=22.20 Aligned_cols=21 Identities=14% Similarity=0.355 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHH-hhhHHHHHH
Q 020114 294 NLVRNMLIAAVE-ERYRDAAQW 314 (331)
Q Consensus 294 ~~L~~~L~~aie-E~YE~AA~l 314 (331)
..+.+.+..+.+ .+|+.|+..
T Consensus 50 ~~~~~~l~~~~~~~d~~~A~~~ 71 (95)
T d1fpoa2 50 DTRHQLMVEQLDNETWDAAADT 71 (95)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhhccHHHHHHH
Confidence 334444555555 666666543
No 6
>d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]}
Probab=14.88 E-value=44 Score=28.78 Aligned_cols=31 Identities=29% Similarity=0.468 Sum_probs=20.5
Q ss_pred ceeEEeecCceeeeeecCCCCccCCCCCCCcEEEEE
Q 020114 110 GFMIKMRDGRHLRCVHNNPQGGHLPDYAPHPAIVLK 145 (331)
Q Consensus 110 ~~~~~~~~~~~l~~~~s~~q~gaLd~~a~~pvIVL~ 145 (331)
..+|.||||..|.+..-.|.++ .+.|+||..
T Consensus 30 ~v~ipmrDG~~L~~~v~~P~~~-----~~~P~il~~ 60 (385)
T d2b9va2 30 EVMVPMRDGVKLYTVIVIPKNA-----RNAPILLTR 60 (385)
T ss_dssp EEEEECTTSCEEEEEEEEETTC-----CSEEEEEEE
T ss_pred EEEEECCCCCEEEEEEEEcCCC-----CceeEEEEE
Confidence 4678899999999765444321 355666654
No 7
>d1fd3a_ g.9.1.1 (A:) Beta-defensin, BD {Human (Homo sapiens), HBD2 [TaxId: 9606]}
Probab=14.49 E-value=18 Score=23.03 Aligned_cols=17 Identities=53% Similarity=1.038 Sum_probs=11.4
Q ss_pred ceeccchhhhccCcccccc
Q 020114 7 PVFCPAVRARQGGLYNTVP 25 (331)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~ 25 (331)
|..||. +-||-|+| .+|
T Consensus 17 p~~Cp~-~~KqIGtC-Gl~ 33 (41)
T d1fd3a_ 17 PVFCPR-RYKQIGTC-GLP 33 (41)
T ss_dssp SSCCCT-TCEEEEBC-SST
T ss_pred CCCCCC-ccceeeec-CCc
Confidence 667776 56777777 444
No 8
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.16 E-value=1.6e+02 Score=18.99 Aligned_cols=36 Identities=14% Similarity=0.257 Sum_probs=31.4
Q ss_pred hhhHHHHHHHHHHHHH-hhhHHHHHHHHHHHhHHhhh
Q 020114 290 TKEFNLVRNMLIAAVE-ERYRDAAQWRDKLGQLRAKR 325 (331)
Q Consensus 290 ~~e~~~L~~~L~~aie-E~YE~AA~lRDeI~~l~~~~ 325 (331)
-++++.++..+.+|-+ -+|++-+.|-.-|+.|+...
T Consensus 5 lqQi~~ik~yI~QAk~a~R~dEV~~Le~NLreLq~e~ 41 (46)
T d1yzma1 5 LQQIHNITSFIRQAKAAGRMDEVRTLQENLRQLQDEY 41 (46)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 4678889999999998 99999999999999987654
No 9
>d2p06a1 a.204.1.3 (A:1-84) Hypothetical protein AF0060 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=13.17 E-value=58 Score=22.90 Aligned_cols=21 Identities=38% Similarity=0.507 Sum_probs=15.3
Q ss_pred HHHHHHHH-hhhHHHHHHHHHHHhH
Q 020114 298 NMLIAAVE-ERYRDAAQWRDKLGQL 321 (331)
Q Consensus 298 ~~L~~aie-E~YE~AA~lRDeI~~l 321 (331)
..|.+||+ |++| .+|||+-..
T Consensus 49 delreavekedwe---nlrdelldv 70 (84)
T d2p06a1 49 DELREAVEKEDWE---NLRDELLDV 70 (84)
T ss_dssp HHHHHHHHTTCHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHHHHHHHH
Confidence 34677888 9988 589988543
No 10
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}
Probab=12.84 E-value=89 Score=26.10 Aligned_cols=80 Identities=11% Similarity=0.065 Sum_probs=46.6
Q ss_pred EEEEEEeecCccceEEEEeCChHHHHHHHHHcCCCEEEehhhHhhcCe--eeeec-CCCCCCCCCCCCCccccCCCCCCC
Q 020114 209 FAQLYLTKVGNETECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGM--RVIES-GKLSTHSPGSDGLLFTELDKPSGQ 285 (331)
Q Consensus 209 yA~L~l~~~g~~~e~~~IDaRPSDAIaLAlR~k~PIyV~eeVl~~agi--~v~e~-~~~~~~~~~~~~~~~~~~d~p~~~ 285 (331)
.+.+++..+|. -.+.=|+++|+|+-+-..-.++-.. ++.+. + -|+ .
T Consensus 337 ~~~~fItHGG~------------~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G---------~G~----------~ 385 (450)
T d2c1xa1 337 AVGAFVTHCGW------------NSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLE---------IGV----------R 385 (450)
T ss_dssp TEEEEEECCCH------------HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSC---------CEE----------E
T ss_pred ceeEEEccCCc------------cHHHHHHHcCCCEEecccccchHHHHHHHHHHcC---------cEE----------E
Confidence 45677777762 3677799999999987654443211 11110 0 011 0
Q ss_pred CCcchhhHHHHHHHHHHHHH-hhhH----HHHHHHHHHH
Q 020114 286 PCLDTKEFNLVRNMLIAAVE-ERYR----DAAQWRDKLG 319 (331)
Q Consensus 286 ~~~~~~e~~~L~~~L~~aie-E~YE----~AA~lRDeI~ 319 (331)
.+....+-+.|++.++++++ |.|. +|.+|++..+
T Consensus 386 l~~~~~t~~~l~~ai~~vL~d~~y~~~~~r~~~l~~~~~ 424 (450)
T d2c1xa1 386 IEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETAD 424 (450)
T ss_dssp CGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 01112234788999999998 8895 5555655443
Done!