Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>020116
MTEEKEEEELKPWEQHSRVISIPRFDYNSPSSLLQRSHSGFLLTCTIKREKSATKEAISI
LHKYVGHNNIENSQRLESSNTAGDSKRRKVCTDDMGGKCADGAEINSIEEDSAGGLQKNE
CHSSVKTDTNTETDFDMSLVKLTRNGLLLLTFPREHSPNTINIVSNIFQSLGSGSLKSPV
WCHRIFPIQATCVLKEKELQATVSKLVLQFVNDEQNKLSRPVKFAVGYNRRGFEEKQNKI
PKDTKDSDVSALLDRNKCFTIVAAAVKEVVSDSAVDLKSPELSVLVELLPISGLPSELLV
VGVSILPQKLVTTKPRLSIRALVSGTNAKNG

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020116
        (331 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2203033 - symbol:AT1G09290 "AT1G09290" species...   873  2.3e-87   1


>TAIR|locus:2203033 [details] [associations]
            symbol:AT1G09290 "AT1G09290" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 UniGene:At.42232 EMBL:AY035155
            IPI:IPI00542417 RefSeq:NP_172400.2 ProteinModelPortal:Q7XBQ8
            PaxDb:Q7XBQ8 PRIDE:Q7XBQ8 EnsemblPlants:AT1G09290.1 GeneID:837450
            KEGG:ath:AT1G09290 eggNOG:NOG297884 OMA:QWCHRIF
            ProtClustDB:CLSN2680693 Genevestigator:Q7XBQ8 Uniprot:Q7XBQ8
        Length = 348

 Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
 Identities = 187/323 (57%), Positives = 227/323 (70%)

Query:    10 LKPWEQHSRVISIPRFDYNSPSSLLQRSHSGFLLTCTIKREKSATKEAISILHKYVGHNN 69
             L PWEQHS +ISIPRFDY +PSSLL  SHSGFL+TC IKREKSATKE +SIL KY+G  +
Sbjct:    32 LTPWEQHSSIISIPRFDYKAPSSLLHHSHSGFLVTCNIKREKSATKEVMSILGKYIGSMH 91

Query:    70 IENSQRLESSNTAGDSKRRKVCTDDMGGKCADGAEINSIEEDSAGGLQKNECHSSVKTDT 129
              E  + L S  TA  SK++KVC  +       G +   +E D+     +N     +K   
Sbjct:    92 EEKPEVLNS--TA--SKKQKVCAQETE---EGGEKTVPLENDALQETGENPNVEDLKL-A 143

Query:   130 NTETDFDMSLVKLTRNGLLLLTFPREHSPNTINIVSNIFQSLGSGSLKSPVWCHRIFPIQ 189
             N E +  MSLVKLT++GLLL TFP E+SPNT NIVS +FQS+ SG+LK+P+WCHRIFP+Q
Sbjct:   144 NEEHNSLMSLVKLTKSGLLLFTFPVENSPNTTNIVSRVFQSMESGALKAPIWCHRIFPVQ 203

Query:   190 ATCVLKEKELQATVSKLVLQFVNDEQNKLSRPVKFAVGYNRRGFEEKQNKIPKDTKDSDV 249
             ATC L EKEL+ TVSKLV +FVND+ N LS+PVKFA GY RRG EE + KI KD  D  V
Sbjct:   204 ATCGLTEKELRETVSKLVQRFVNDKDNTLSKPVKFAAGYQRRGAEETKGKIRKDASDVLV 263

Query:   250 SA-LLDRNKCFTIVAAAVKEVVSDSAVDLKSPELSVLVELLPISGLPSELLVVGVSILPQ 308
                LLDR KCF  VAA VK++V DS VDLKSPEL VLVELLP+S + S   V  VS+LP 
Sbjct:   264 QCPLLDRIKCFETVAAGVKDIVPDSVVDLKSPELCVLVELLPLSRISSGSFVAAVSVLPH 323

Query:   309 KLVTTKPRLSIRALVSGTNAKNG 331
             +LV+TKP+L I+ LV  +  K G
Sbjct:   324 RLVSTKPKLCIKPLVPESKHKKG 346


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.130   0.366    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      331       324   0.00086  116 3  11 23  0.44    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  203 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.19u 0.12s 28.31t   Elapsed:  00:00:02
  Total cpu time:  28.19u 0.12s 28.31t   Elapsed:  00:00:02
  Start:  Sat May 11 02:33:36 2013   End:  Sat May 11 02:33:38 2013

Back to top