Query 020117
Match_columns 331
No_of_seqs 221 out of 1563
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 07:09:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020117.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020117hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0700 Protein phosphatase 2C 100.0 2.7E-54 5.9E-59 398.2 22.4 284 20-308 49-380 (390)
2 KOG0697 Protein phosphatase 1B 100.0 5.4E-49 1.2E-53 344.1 20.0 252 33-319 19-289 (379)
3 PLN03145 Protein phosphatase 2 100.0 3.6E-47 7.9E-52 359.5 27.3 240 41-319 71-328 (365)
4 KOG0698 Serine/threonine prote 100.0 2.3E-46 5E-51 351.8 26.3 241 39-320 43-303 (330)
5 PF00481 PP2C: Protein phospha 100.0 7.6E-47 1.6E-51 343.8 16.8 236 38-313 2-254 (254)
6 PTZ00224 protein phosphatase 2 100.0 2.5E-44 5.3E-49 341.3 27.5 237 38-319 24-269 (381)
7 COG0631 PTC1 Serine/threonine 100.0 9.6E-41 2.1E-45 304.2 23.5 224 40-321 13-252 (262)
8 KOG0699 Serine/threonine prote 100.0 4.1E-40 8.9E-45 297.5 19.3 163 129-319 329-501 (542)
9 smart00332 PP2Cc Serine/threon 100.0 4.1E-36 8.9E-41 272.2 26.5 235 39-318 9-255 (255)
10 cd00143 PP2Cc Serine/threonine 100.0 1.1E-35 2.3E-40 268.7 26.2 236 39-319 4-253 (254)
11 PRK14559 putative protein seri 100.0 5.7E-35 1.2E-39 291.8 24.0 225 41-319 381-633 (645)
12 KOG1323 Serine/threonine phosp 100.0 3.2E-28 6.9E-33 218.5 19.4 267 7-304 72-459 (493)
13 KOG1379 Serine/threonine prote 99.8 8.9E-20 1.9E-24 164.2 19.4 186 47-304 89-293 (330)
14 PF13672 PP2C_2: Protein phosp 99.8 1.1E-19 2.5E-24 160.4 14.8 181 41-289 4-193 (212)
15 KOG0618 Serine/threonine phosp 99.8 3.2E-19 6.9E-24 179.3 14.4 217 58-324 548-775 (1081)
16 smart00331 PP2C_SIG Sigma fact 99.8 9.3E-17 2E-21 139.7 19.0 175 43-303 11-192 (193)
17 TIGR02865 spore_II_E stage II 99.5 5.4E-13 1.2E-17 138.1 19.1 190 42-319 560-762 (764)
18 PF07228 SpoIIE: Stage II spor 99.3 4E-10 8.7E-15 97.7 18.9 176 59-319 2-191 (193)
19 COG2208 RsbU Serine phosphatas 98.1 0.00026 5.5E-09 67.9 18.8 190 46-320 159-365 (367)
20 PRK10693 response regulator of 81.7 21 0.00045 33.1 11.2 101 46-157 147-254 (303)
21 COG2168 DsrH Uncharacterized c 77.7 0.87 1.9E-05 34.6 0.4 63 258-324 20-83 (96)
22 PRK06369 nac nascent polypepti 48.8 53 0.0012 26.0 5.4 43 247-289 37-86 (115)
23 PF09436 DUF2016: Domain of un 36.4 21 0.00046 25.7 1.3 21 262-283 26-46 (72)
24 TIGR00264 alpha-NAC-related pr 30.7 1.6E+02 0.0035 23.4 5.5 43 247-289 41-88 (116)
No 1
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-54 Score=398.15 Aligned_cols=284 Identities=49% Similarity=0.787 Sum_probs=252.4
Q ss_pred CCCcceeecccCCCccCccceeeecccc-------ccccceEEe--cCCCceEEEEecCCChhHHHHHHHHHHHHHHHh-
Q 020117 20 GGDGLLWHMDLKSHASGDYSIAVVQANS-------MLEDQGQVF--TSPSATYVGVYDGHGGPEASRFITRHLFPFLHK- 89 (331)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~-------~~ED~~~~~--~~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~- 89 (331)
+...+.|..+...+.-+++++++.+.++ .-||+.... ...++.|+||||||||..||+|+.++|..++..
T Consensus 49 ~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~ 128 (390)
T KOG0700|consen 49 SVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARE 128 (390)
T ss_pred CcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHH
Confidence 3467899999988888999998888754 455665433 367889999999999999999999999999872
Q ss_pred -----------hhhh--------------------c-CCCcHHHHHHHHHHHHHHHHHHHHhhcccCCCccCcCceEEEE
Q 020117 90 -----------FTTE--------------------Q-GGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVG 137 (331)
Q Consensus 90 -----------~~~~--------------------~-~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~ 137 (331)
+..+ . .....++|.+||.++++.|.+....++...++...+|+||++.
T Consensus 129 L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~ 208 (390)
T KOG0700|consen 129 LQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVG 208 (390)
T ss_pred hhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEE
Confidence 2111 1 3556789999999999999999999999999999999999999
Q ss_pred EEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEEeeCCeeeecCcccccc
Q 020117 138 VIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSR 217 (331)
Q Consensus 138 ~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~ltR 217 (331)
++.++.|||||+|||||+|.+....++ .+.+.|||.||+.++++|++||+..||+...+++..+ |||+|.|++||
T Consensus 209 ~i~~~~LyVaN~GDSRAVLG~~~~~~~---~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~--~RvkG~L~vsR 283 (390)
T KOG0700|consen 209 LIKGGDLYVANVGDSRAVLGVVENNGS---WLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKH--WRVKGILQVSR 283 (390)
T ss_pred EEeCCeEEEEecCcchhhhceecCCCC---eEEEEecChhhccccHHHHHHHHHhCCCCcceEeecc--ceeeEEEEeee
Confidence 999999999999999999988873333 4799999999999999999999999999999998887 89999999999
Q ss_pred cccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccCHHHHHHHHhc-----Cc-
Q 020117 218 SIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSR-----NP- 291 (331)
Q Consensus 218 alGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls~~ei~~iv~~-----~~- 291 (331)
||||.++|+++++++|.+..|.++.+.++||++++|+|+.++|++.|+||||+||||||.||++|++++|.. .|
T Consensus 284 AfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd 363 (390)
T KOG0700|consen 284 AFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPD 363 (390)
T ss_pred eccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 55
Q ss_pred cchHHHHHHHhcCCCCc
Q 020117 292 RSVRPQLKTYAVYPSQV 308 (331)
Q Consensus 292 ~~~a~~L~~~a~~~~~~ 308 (331)
+.+|+.|++.|+.+...
T Consensus 364 ~~~A~hLIr~aL~~aak 380 (390)
T KOG0700|consen 364 GNPATHLIRHALGRAAK 380 (390)
T ss_pred CCHHHHHHHHHHhhhhh
Confidence 56899999999976554
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-49 Score=344.11 Aligned_cols=252 Identities=22% Similarity=0.356 Sum_probs=212.6
Q ss_pred CccCccceeeecc-ccccccceEEec-----CCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcC----C---CcH
Q 020117 33 HASGDYSIAVVQA-NSMLEDQGQVFT-----SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQG----G---LSA 99 (331)
Q Consensus 33 ~~~~~~~~~~~~~-r~~~ED~~~~~~-----~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~----~---~~~ 99 (331)
.....|.+++||| |-.|||+|.... -++|+||||||||.|+++|.+++++|.+.+.+...... . ...
T Consensus 19 GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~~~ 98 (379)
T KOG0697|consen 19 GNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVENVE 98 (379)
T ss_pred CCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHHHH
Confidence 3457899999999 569999986552 35899999999999999999999999998865322211 1 234
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCC
Q 020117 100 EVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHN 179 (331)
Q Consensus 100 ~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~ 179 (331)
.-|+..|.++++-+...... .....++|||++.+++...++|++|+||||++++|++ .+..-|+||+
T Consensus 99 ~GIrtGFL~iDE~mr~~~~~----~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng---------~~~f~TqDHK 165 (379)
T KOG0697|consen 99 KGIRTGFLSIDEIMRTLSDI----SKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNG---------EVVFSTQDHK 165 (379)
T ss_pred hhHhhcceeHHHHHhhhhhh----hcccccCCceEEEEEecCceEEEEecCcchhheecCC---------ceEEeccCCC
Confidence 56888888888777665432 2223458999999999999999999999999999998 6899999999
Q ss_pred CCCHHHHHHHHhhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEE
Q 020117 180 VGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRK 259 (331)
Q Consensus 180 ~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~ 259 (331)
|..+.|++||..+ |+-++-+ ||+|.|++||||||+.||... ..++..++|+++|+|..+.
T Consensus 166 P~~p~EkeRIqnA----GGSVMIq----RvNGsLAVSRAlGDydyK~v~------------~kgp~eQlVSPEPev~~~~ 225 (379)
T KOG0697|consen 166 PYLPKEKERIQNA----GGSVMIQ----RVNGSLAVSRALGDYDYKNVP------------GKGPTEQLVSPEPEVYIIE 225 (379)
T ss_pred CCChHHHHHHhcC----CCeEEEE----EecceeeeehhccCcccccCC------------CCCchhcccCCCCceEEee
Confidence 9999999999988 4555544 999999999999999998643 2345578999999999999
Q ss_pred cCCCCeEEEEEeCCCcCccCHHHHHHHHhc------CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 260 LKSNDLFLIFASDGLWEQLSDEAAVEIVSR------NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 260 L~~~d~fLVL~SDGlwd~ls~~ei~~iv~~------~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
-+..|+|+|||+|||||+|+++|++++|+. ...++|...++.++.+|++ ||+|+|+|-
T Consensus 226 R~eedeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKGSR--DNMsivlvc 289 (379)
T KOG0697|consen 226 RSEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKGSR--DNMSIVLVC 289 (379)
T ss_pred ccccCcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhccCc--cCceEEEEe
Confidence 998888999999999999999999999986 4788999999999999999 999999874
No 3
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=3.6e-47 Score=359.46 Aligned_cols=240 Identities=28% Similarity=0.393 Sum_probs=196.0
Q ss_pred eeeccccccccceEEecC------------CCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHH
Q 020117 41 AVVQANSMLEDQGQVFTS------------PSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDA 108 (331)
Q Consensus 41 ~~~~~r~~~ED~~~~~~~------------~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~ 108 (331)
+..+.|+.|||+|.+..+ .+..||||||||||+.++++++++|++.+.+.... .....++|+++|.+
T Consensus 71 s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~-~~~~~~al~~af~~ 149 (365)
T PLN03145 71 ADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDF-PREIEKVVSSAFLQ 149 (365)
T ss_pred ccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHHHHH
Confidence 334449999999876431 23589999999999999999999999998764222 22356789999999
Q ss_pred HHHHHHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHH
Q 020117 109 TEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKE 188 (331)
Q Consensus 109 ~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~r 188 (331)
++++|.+... . .....+|||++++++.++++|+|||||||+|+++.+ .+++||+||++.++.|++|
T Consensus 150 ~d~~~~~~~~----~-~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g---------~~~~LT~DH~~~~~~E~~R 215 (365)
T PLN03145 150 TDTAFAEACS----L-DASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG---------KAIEMSRDHKPMCSKERKR 215 (365)
T ss_pred HhHHHHhhhc----c-ccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC---------eEEEecCCCCCCCHHHHHH
Confidence 9998866431 1 123348999999999999999999999999999987 6999999999999999999
Q ss_pred HHhhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEE
Q 020117 189 VEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLI 268 (331)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLV 268 (331)
|.+. ++.+.. .|++|.+++||||||..+|.... ...+.++++|++..++|+++|.|||
T Consensus 216 I~~~----Gg~v~~----g~v~g~l~vTRalGD~~~k~~k~--------------~~~~~vs~ePdv~~~~l~~~D~fLI 273 (365)
T PLN03145 216 IEAS----GGYVYD----GYLNGQLNVARALGDWHMEGMKG--------------SDGGPLSAEPELMTTQLTEEDEFLI 273 (365)
T ss_pred HHHc----CCceec----ceECCcccccccccccccccccc--------------ccCCCcceEEEEEEEECCCCCEEEE
Confidence 9876 344432 28899999999999988764220 0113478899999999999999999
Q ss_pred EEeCCCcCccCHHHHHHHHhc------CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 269 FASDGLWEQLSDEAAVEIVSR------NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 269 L~SDGlwd~ls~~ei~~iv~~------~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
||||||||+|+++|+++++++ .++++|+.|++.|+.+++. ||+|+|||.
T Consensus 274 LaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~rgs~--DNITvIVV~ 328 (365)
T PLN03145 274 IGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKRKSG--DNLAVVVVC 328 (365)
T ss_pred EeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCC--CCEEEEEEE
Confidence 999999999999999877753 4778999999999999998 999999987
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-46 Score=351.84 Aligned_cols=241 Identities=37% Similarity=0.562 Sum_probs=207.6
Q ss_pred ceeeecc-ccccccceEEec--------CC-CceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCC--CcHHHHHHHH
Q 020117 39 SIAVVQA-NSMLEDQGQVFT--------SP-SATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGG--LSAEVIKKAF 106 (331)
Q Consensus 39 ~~~~~~~-r~~~ED~~~~~~--------~~-~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~--~~~~~l~~a~ 106 (331)
+.+..++ |..|||++.... .. +..||||||||||+.+|+|+.++|+..+.+....... ...++++++|
T Consensus 43 ~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~F 122 (330)
T KOG0698|consen 43 SLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRAF 122 (330)
T ss_pred EEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHH
Confidence 4445555 778999986652 22 4799999999999999999999999999887655543 2678899999
Q ss_pred H-HHHHHHHHHHHhhcccCCCccCcCceEEEEEEECC-EEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHH
Q 020117 107 D-ATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKD-VLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEE 184 (331)
Q Consensus 107 ~-~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~-~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~ 184 (331)
. .++.++.+. ..+...+|||++++++.++ ++|+||+|||||+|++.+ + .+.+||.||+|..+.
T Consensus 123 ~~~~D~~~~~~-------~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~---~-----~a~~Ls~DHkP~~~~ 187 (330)
T KOG0698|consen 123 LTKTDSEFLEK-------REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKG---G-----VAVQLSVDHKPDRED 187 (330)
T ss_pred HHHHHHHHHhh-------ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCC---C-----eeeeCCCCCCCCcHH
Confidence 9 599988864 1123457888888888755 999999999999999875 3 699999999999999
Q ss_pred HHHHHHhhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCC
Q 020117 185 VRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSND 264 (331)
Q Consensus 185 e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d 264 (331)
|++||.+. |+.+....++||++|.|++||+|||..+|. ++|+++|++....++..|
T Consensus 188 E~~RI~~~----GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~--------------------~~v~a~Pei~~~~~~~~d 243 (330)
T KOG0698|consen 188 ERERIEAA----GGRVSNWGGVWRVNGVLAVSRAFGDVELKS--------------------QGVIAEPEIQQVKINSDD 243 (330)
T ss_pred HHHHHHHc----CCEEEEcCCcceEeceEEEeeecCCHHhcC--------------------CcEecCCceEEEEcCCCC
Confidence 99999998 677877777899999999999999999874 469999999999999999
Q ss_pred eEEEEEeCCCcCccCHHHHHHHHhc------CccchHHHHHHHhcCCCCcccCCceEEEEee
Q 020117 265 LFLIFASDGLWEQLSDEAAVEIVSR------NPRSVRPQLKTYAVYPSQVWDRPMSFILHAS 320 (331)
Q Consensus 265 ~fLVL~SDGlwd~ls~~ei~~iv~~------~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~~ 320 (331)
+||||+||||||+|+++|++++|+. .+..++..+...|+.+++. ||+|+|+|..
T Consensus 244 eFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~~~s~--DnitvvvV~l 303 (330)
T KOG0698|consen 244 EFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALSRGSK--DNITVVVVRL 303 (330)
T ss_pred cEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhhcCCC--CCeEEEEEEe
Confidence 9999999999999999999999998 5778889999999999999 9999999973
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=7.6e-47 Score=343.82 Aligned_cols=236 Identities=33% Similarity=0.513 Sum_probs=190.9
Q ss_pred cceeeecc-ccccccceEEec-------CCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCC-CcHHHHHHHHHH
Q 020117 38 YSIAVVQA-NSMLEDQGQVFT-------SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGG-LSAEVIKKAFDA 108 (331)
Q Consensus 38 ~~~~~~~~-r~~~ED~~~~~~-------~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~-~~~~~l~~a~~~ 108 (331)
|+.+..++ |+.|||++.+.. ..+..+|+|||||||..+|++++++|+..+.+....... ...++|+.+|..
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~~ 81 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFLA 81 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceeee
Confidence 45566666 889999998774 346799999999999999999999999888876655444 567889999999
Q ss_pred -HHHHHHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeee-cccCCCCCCCHHHH
Q 020117 109 -TEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAE-RLSVDHNVGVEEVR 186 (331)
Q Consensus 109 -~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~-~LT~dH~~~~~~e~ 186 (331)
++..+.+.... . ....+|||++++++.++++|+|||||||+|+++.+ ... +||+||+|.++.|+
T Consensus 82 ~~~~~~~~~~~~----~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~---------~~~~~Lt~dH~~~~~~E~ 147 (254)
T PF00481_consen 82 FTDESLYSDSEN----N-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNG---------GIIKQLTRDHKPSNPDER 147 (254)
T ss_dssp HHHHHHHHHHHH----H-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETT---------EEEEESS---STTSHHHH
T ss_pred cccccccccccc----c-ccccccccccccccccceeEEEeeeeeeeeeeecc---------ccccccccccccchhhcc
Confidence 88777663221 1 24558999999999999999999999999999998 355 99999999999999
Q ss_pred HHHHhhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeE
Q 020117 187 KEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLF 266 (331)
Q Consensus 187 ~ri~~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~f 266 (331)
+||.+.+ +.+.. .+|+.|.|++||||||..+|.+. +++|+++|++..++++++|+|
T Consensus 148 ~RI~~~g----g~v~~---~~rv~g~l~~sRalGd~~~k~~~-----------------~~~v~~~P~i~~~~l~~~d~f 203 (254)
T PF00481_consen 148 ERIRKAG----GRVSE---NGRVNGVLAVSRALGDFDLKPPG-----------------KPGVIAEPDISEVDLTPDDEF 203 (254)
T ss_dssp HHHHHTT-----GEEE---TEEETTTBSSSB-EE-GGGTTCT-----------------SSSSB---EEEEEEEBTTEEE
T ss_pred ceeeccc----ccccc---chhhhhccccccccccccccccc-----------------cceeeeecccccccccccceE
Confidence 9999985 33332 36999999999999999997532 367999999999999999999
Q ss_pred EEEEeCCCcCccCHHHHHHHHhcC------ccchHHHHHHHhcCCCCcccCCc
Q 020117 267 LIFASDGLWEQLSDEAAVEIVSRN------PRSVRPQLKTYAVYPSQVWDRPM 313 (331)
Q Consensus 267 LVL~SDGlwd~ls~~ei~~iv~~~------~~~~a~~L~~~a~~~~~~~~dn~ 313 (331)
||||||||||+|+++|+++++.+. |+.+|+.|+++|+.+++. ||+
T Consensus 204 lvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~gs~--DNi 254 (254)
T PF00481_consen 204 LVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIARGSK--DNI 254 (254)
T ss_dssp EEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTTHH--SHE
T ss_pred EEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCCC--CCC
Confidence 999999999999999999999873 788999999999999998 885
No 6
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=2.5e-44 Score=341.32 Aligned_cols=237 Identities=26% Similarity=0.318 Sum_probs=195.4
Q ss_pred cceeeecc-ccccccceEEecCCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHHHH
Q 020117 38 YSIAVVQA-NSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHL 116 (331)
Q Consensus 38 ~~~~~~~~-r~~~ED~~~~~~~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~ 116 (331)
+..+..+| |+.|||++.+...++..+|||||||||..+|++++++|...+.+.. .....+.|++++..+++++.+.
T Consensus 24 ~g~~s~~G~R~~nED~~~v~~~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~---~~~~~~~l~~a~~~~d~~i~~~ 100 (381)
T PTZ00224 24 CASACVNGYRESMEDAHLLYLTDDWGFFGVFDGHVNDECSQYLARAWPQALEKEP---EPMTDERMEELCLEIDEEWMDS 100 (381)
T ss_pred EEEEeCCCCCCCCCCeeEeccCCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcc---ccccHHHHHHHHHHHHHHHHhc
Confidence 34444445 8899999887777777899999999999999999999998775432 1223567999999999988753
Q ss_pred HHhhcccCCCccCcCceEEEEEEE-CCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCC
Q 020117 117 VKRSWSARPQIASVGSCCLVGVIA-KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPD 195 (331)
Q Consensus 117 ~~~~~~~~~~~~~~GtT~~~~~i~-~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~ 195 (331)
. ..+|||++++++. ++++++|||||||+|++|.+ ++++||+||++.++.|+.||...
T Consensus 101 ~----------~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g---------~~~~LT~DH~~~~~~E~~RI~~~--- 158 (381)
T PTZ00224 101 G----------REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDG---------KLVFATEDHKPNNPGERQRIEAC--- 158 (381)
T ss_pred c----------cCCCCeEEEEEEEECCEEEEEEcccceEEEEECC---------EEEEcccCCCCCCHHHHhHHHHc---
Confidence 2 1358999888776 57999999999999999987 69999999999999999999876
Q ss_pred CCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCc
Q 020117 196 DSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLW 275 (331)
Q Consensus 196 ~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlw 275 (331)
++.+.. .|++|.+++||||||..+|..+. .+...+.|+++|++..+.++++| ||||||||||
T Consensus 159 -gg~v~~----~Rv~G~l~vTRalGd~~~K~~~~------------~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~ 220 (381)
T PTZ00224 159 -GGRVVS----NRVDGDLAVSRAFGDRSFKVKGT------------GDYLEQKVIAVPDVTHLTCQSND-FIILACDGVF 220 (381)
T ss_pred -cCEecc----ccccCceeeecccCCcccccccc------------cccccCcceeeeEEEEEECCCCC-EEEEECCCcC
Confidence 333322 38999999999999988876531 12234568899999999999888 8999999999
Q ss_pred C-ccCHHHHHHHHhc------CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 276 E-QLSDEAAVEIVSR------NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 276 d-~ls~~ei~~iv~~------~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
| +++++|+.+++.+ .++.+|+.|+++|+.+++. ||+|+|||.
T Consensus 221 d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~rGs~--DNITvIvV~ 269 (381)
T PTZ00224 221 EGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIRRGSK--DNISCLIVQ 269 (381)
T ss_pred cCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCC--CCEEEEEEE
Confidence 9 8999999999973 4678999999999999998 999999987
No 7
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-41 Score=304.19 Aligned_cols=224 Identities=26% Similarity=0.368 Sum_probs=187.7
Q ss_pred eeeecc-ccccccceEEecCCC---ceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCC-----cHHHHHHHHHHHH
Q 020117 40 IAVVQA-NSMLEDQGQVFTSPS---ATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGL-----SAEVIKKAFDATE 110 (331)
Q Consensus 40 ~~~~~~-r~~~ED~~~~~~~~~---~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~-----~~~~l~~a~~~~~ 110 (331)
.+..+. |..|||++.+..+.+ ..||+|||||||+++++++++.+.+.|.+........ ..+++++++..++
T Consensus 13 ~s~~g~~R~~NeD~~~~~~~~~~~~~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~n 92 (262)
T COG0631 13 LSDVGTVRKHNEDAFLIKPNENGNLLLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKEAILKAN 92 (262)
T ss_pred eccCCCccCCCCcceeeccccCCcceeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHH
Confidence 344444 778999998886444 4699999999999999999999999888764432111 3688999999999
Q ss_pred HHHHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHH
Q 020117 111 EEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVE 190 (331)
Q Consensus 111 ~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~ 190 (331)
+++..... .+.....||||++++++.++++|+|||||||+|++|++ .+++||.||++.++.++.++.
T Consensus 93 ~~i~~~~~----~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~---------~~~~lT~DH~~~~~~~~~~~~ 159 (262)
T COG0631 93 EAIAEEGQ----LNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDG---------ELKQLTEDHSLVNRLEQRGII 159 (262)
T ss_pred HHHHHhhh----cccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCC---------ceEEeccCCcHHHHHHHhcCC
Confidence 99887643 34456779999999999999999999999999999998 699999999999998887654
Q ss_pred hh-----CCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCe
Q 020117 191 AL-----HPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDL 265 (331)
Q Consensus 191 ~~-----~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~ 265 (331)
.. ||.. + ++|||||+... .+|++....++++|
T Consensus 160 ~~~~~~~~~~~-------------~---~ltralG~~~~--------------------------~~p~~~~~~~~~~d- 196 (262)
T COG0631 160 TPEEARSHPRR-------------N---ALTRALGDFDL--------------------------LEPDITELELEPGD- 196 (262)
T ss_pred CHHHHHhCccc-------------h---hhhhhcCCCcc--------------------------cceeEEEEEcCCCC-
Confidence 32 3322 1 59999999654 38999999999996
Q ss_pred EEEEEeCCCcCccCHHHHHHHHhc--CccchHHHHHHHhcCCCCcccCCceEEEEeee
Q 020117 266 FLIFASDGLWEQLSDEAAVEIVSR--NPRSVRPQLKTYAVYPSQVWDRPMSFILHASY 321 (331)
Q Consensus 266 fLVL~SDGlwd~ls~~ei~~iv~~--~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~~~ 321 (331)
|||||||||||.++++++.++++. .+++++++|++.|+..++. ||+|+|+|+..
T Consensus 197 ~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~li~~a~~~g~~--DNiT~ilv~~~ 252 (262)
T COG0631 197 FLLLCSDGLWDVVSDDEIVDILKNSETPQEAADKLIELALEGGGP--DNITVVLVRLN 252 (262)
T ss_pred EEEEECCCCccCcCHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCC--CceEEEEEEee
Confidence 888999999999999999999995 6899999999999998888 99999999843
No 8
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-40 Score=297.52 Aligned_cols=163 Identities=32% Similarity=0.490 Sum_probs=144.8
Q ss_pred CcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEEeeCCeee
Q 020117 129 SVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWR 208 (331)
Q Consensus 129 ~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~r 208 (331)
.+|||+++|++.+++|||||.||||++++|++ ++..++.||+|.++.|..||..++ +.+... | |
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~G---------kAvdmS~DHKPEDevE~~RI~~AG----G~vtlD-G--R 392 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNG---------KAVDMSVDHKPEDEVETNRIHAAG----GQVTLD-G--R 392 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCC---------ceeecccCCCcccHHHHHHHHhcC----CeEeec-c--e
Confidence 57999999999999999999999999999998 799999999999999999999984 433332 2 9
Q ss_pred ecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccCHHHHHHHHh
Q 020117 209 IKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVS 288 (331)
Q Consensus 209 v~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls~~ei~~iv~ 288 (331)
|+|.|+++|+|||..||+.. ..|++.++|++-|+|....|++.|+|+||++||||++|+.+|++++|+
T Consensus 393 VNGGLNLSRA~GDHaYK~N~------------~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr 460 (542)
T KOG0699|consen 393 VNGGLNLSRAFGDHAYKKNQ------------ELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVR 460 (542)
T ss_pred ecCccchhhhhhhhhhhccc------------CCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHH
Confidence 99999999999999998643 357788999999999999999999999999999999999999999998
Q ss_pred c------CccchHHHHHHHhcCCCC----cccCCceEEEEe
Q 020117 289 R------NPRSVRPQLKTYAVYPSQ----VWDRPMSFILHA 319 (331)
Q Consensus 289 ~------~~~~~a~~L~~~a~~~~~----~~~dn~s~ivv~ 319 (331)
. ...++|+.|++.++.... +.=||||+|++-
T Consensus 461 ~~l~~n~~ls~iceeL~D~CLAp~T~GDGTGCDNMT~ii~~ 501 (542)
T KOG0699|consen 461 DLLAKNSSLSEICEELCDACLAPSTDGDGTGCDNMTVIITT 501 (542)
T ss_pred HHHhcCchHHHHHHHHHHhhcCCCCCCCCcCCCcceEEEEE
Confidence 6 367799999999998543 345999999875
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=4.1e-36 Score=272.20 Aligned_cols=235 Identities=35% Similarity=0.581 Sum_probs=194.9
Q ss_pred ceeeecc-ccccccceEEecC--CCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCC---CcHHHHHHHHHHHHHH
Q 020117 39 SIAVVQA-NSMLEDQGQVFTS--PSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGG---LSAEVIKKAFDATEEE 112 (331)
Q Consensus 39 ~~~~~~~-r~~~ED~~~~~~~--~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~---~~~~~l~~a~~~~~~~ 112 (331)
+.+..++ |..|||++.+... .+..+|+|||||||+.+|+++++.+.+.+.+....... .+.+.|++++..++.+
T Consensus 9 ~~~~~~~~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 88 (255)
T smart00332 9 GLSSMQGVRKPMEDAHVITPDLSDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKTDEE 88 (255)
T ss_pred EEecCCCCCCCCcceEEEeccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHH
Confidence 3344555 7899999988876 78899999999999999999999999998875443322 3667889999999998
Q ss_pred HHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhh
Q 020117 113 FLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEAL 192 (331)
Q Consensus 113 l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~ 192 (331)
+....... .....+|||++++++..++++++|+||||+|+++.+ .++++|.||++.++.+..|+...
T Consensus 89 ~~~~~~~~----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~---------~~~~lt~dh~~~~~~~~~~i~~~ 155 (255)
T smart00332 89 ILEELESL----EEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNG---------KAVQLTEDHKPSNEDERARIEAA 155 (255)
T ss_pred HHHhhhhc----cCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCC---------ceeEcCCCCCCcCHHHHHHHHHc
Confidence 87765322 133458999999999999999999999999999987 58999999999999999998876
Q ss_pred CCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEc-CCCCeEEEEEe
Q 020117 193 HPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKL-KSNDLFLIFAS 271 (331)
Q Consensus 193 ~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L-~~~d~fLVL~S 271 (331)
+. .+.. ++.++...+||++|+..+| |.++++|++...++ .++| +|||||
T Consensus 156 ~~----~~~~----~~~~~~~~lt~~~g~~~~~---------------------~~i~~~p~~~~~~~~~~~d-~ill~S 205 (255)
T smart00332 156 GG----FVIN----GRVNGVLALSRAIGDFFLK---------------------PYVSAEPDVTVVELTEKDD-FLILAS 205 (255)
T ss_pred CC----EEEC----CeECCeEecccccCCHhhc---------------------CCeEeeeEEEEEEecCCCc-EEEEEC
Confidence 42 2211 1566667899999997664 56889999999996 7777 788999
Q ss_pred CCCcCccCHHHHHHHHhc-----CccchHHHHHHHhcCCCCcccCCceEEEE
Q 020117 272 DGLWEQLSDEAAVEIVSR-----NPRSVRPQLKTYAVYPSQVWDRPMSFILH 318 (331)
Q Consensus 272 DGlwd~ls~~ei~~iv~~-----~~~~~a~~L~~~a~~~~~~~~dn~s~ivv 318 (331)
|||||.++++++.+++.+ .+.++++.|.+.|..++.. ||+|+|++
T Consensus 206 DGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~--Dn~T~ivv 255 (255)
T smart00332 206 DGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLIDLALARGSK--DNITVIVV 255 (255)
T ss_pred CccccCCCHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHcCCC--CCeEEEEC
Confidence 999999999999999987 3788999999999998787 99999985
No 10
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.1e-35 Score=268.71 Aligned_cols=236 Identities=33% Similarity=0.485 Sum_probs=193.5
Q ss_pred ceeeecc-ccccccceEEecCC---CceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhc----CCCcHHHHHHHHHHHH
Q 020117 39 SIAVVQA-NSMLEDQGQVFTSP---SATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQ----GGLSAEVIKKAFDATE 110 (331)
Q Consensus 39 ~~~~~~~-r~~~ED~~~~~~~~---~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~----~~~~~~~l~~a~~~~~ 110 (331)
..+..++ |..|||++.+.... ++.+|+|||||||+..++++++.+.+.+.+..... .......|+++|..++
T Consensus 4 ~~~~~~g~r~~neD~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (254)
T cd00143 4 GVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFLRAD 83 (254)
T ss_pred eeecCCCCCCCCcceEEEeccCCCCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHH
Confidence 3445555 77899999887655 78999999999999999999999999887765443 2334567899999999
Q ss_pred HHHHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHH
Q 020117 111 EEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVE 190 (331)
Q Consensus 111 ~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~ 190 (331)
+++...... ......+|||++++++.+++++++|+||||+|+++++ .++++|.||++.++.+..|+.
T Consensus 84 ~~l~~~~~~----~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~---------~~~~lt~dh~~~~~~~~~~i~ 150 (254)
T cd00143 84 EEILEEAQD----EPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG---------EAVQLTKDHKPVNEEERERIE 150 (254)
T ss_pred HHHHHhhhh----ccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCC---------ceeEcCCCCCCcChHHHHHHH
Confidence 888775432 1234568999999999999999999999999999998 699999999999988888888
Q ss_pred hhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEc-CCCCeEEEE
Q 020117 191 ALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKL-KSNDLFLIF 269 (331)
Q Consensus 191 ~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L-~~~d~fLVL 269 (331)
..++. .. ..+.++...+||+||+..+| +.+.++|++..+++ +++| +|||
T Consensus 151 ~~~~~----~~----~~~~~~~~~~t~~lG~~~~~---------------------~~~~~~~~~~~~~l~~~~d-~ill 200 (254)
T cd00143 151 KAGGR----VS----NGRVPGVLAVTRALGDFDLK---------------------PGVSAEPDVTVVKLTEDDD-FLIL 200 (254)
T ss_pred HcCCc----EE----eCEEcCceeeccccCCcccc---------------------CCEEcCCeEEEEEeCCCCc-EEEE
Confidence 76432 11 12455666799999997665 34677999999999 7777 6889
Q ss_pred EeCCCcCccCHHHHHHHHhc-----CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 270 ASDGLWEQLSDEAAVEIVSR-----NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 270 ~SDGlwd~ls~~ei~~iv~~-----~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
|||||||.+++++|.+++.. .++++|+.|++.|...+.. ||+|+|++.
T Consensus 201 ~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~a~~~~~~--Dn~t~i~~~ 253 (254)
T cd00143 201 ASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRGSH--DNITVVVVR 253 (254)
T ss_pred ECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHHHHhCCCC--CCEEEEEEe
Confidence 99999999999999999986 4778999999999998877 999999875
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=5.7e-35 Score=291.82 Aligned_cols=225 Identities=24% Similarity=0.303 Sum_probs=164.6
Q ss_pred eeecc-ccccccceEEecC------C------CceEEEEecCCChhH----HHHHHHHHHHHHHHhhhhhcCCCcHHHHH
Q 020117 41 AVVQA-NSMLEDQGQVFTS------P------SATYVGVYDGHGGPE----ASRFITRHLFPFLHKFTTEQGGLSAEVIK 103 (331)
Q Consensus 41 ~~~~~-r~~~ED~~~~~~~------~------~~~l~~V~DGhGG~~----as~~a~~~l~~~l~~~~~~~~~~~~~~l~ 103 (331)
+..+. |+.|||++.+... + ...+|+|||||||+. ||++++++|.+++.+.... .....+.|+
T Consensus 381 Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~-~~~~~~~L~ 459 (645)
T PRK14559 381 TDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQD-ELPDEETIR 459 (645)
T ss_pred CCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcc-cccHHHHHH
Confidence 33443 7899999866431 1 346999999999877 5566666666665543221 112356799
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCH
Q 020117 104 KAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVE 183 (331)
Q Consensus 104 ~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~ 183 (331)
++|..+++++.+...+. ......+||||++++++.++++|++||||||+|+++++ + .+++||+||++.++
T Consensus 460 ~ai~~AN~~I~~~~~~~--~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~---g-----~l~QLT~DHs~~~~ 529 (645)
T PRK14559 460 EAIYLANEAIYDLNQQN--ARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRK---G-----GLEQLTVDHEVGQR 529 (645)
T ss_pred HHHHHHHHHHHHHhhhc--ccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecC---C-----eEEEeCCCCCHHHH
Confidence 99999999998754321 11234569999999999999999999999999998543 2 69999999999866
Q ss_pred HHHHHH----HhhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEE
Q 020117 184 EVRKEV----EALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRK 259 (331)
Q Consensus 184 ~e~~ri----~~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~ 259 (331)
+.+..+ ...|| +...+|||||+...+. .+|++..+.
T Consensus 530 lv~~Gi~~~~a~~~p----------------~~~~LTrALG~~~~~~------------------------l~Pdi~~~~ 569 (645)
T PRK14559 530 EIQRGVEPQIAYARP----------------DAYQLTQALGPRDNSA------------------------IQPDIQFLE 569 (645)
T ss_pred HHHhCCCHHHHhcCc----------------ccceeeeccCCCCCCc------------------------ccceEEEEE
Confidence 544321 11121 2236999999854321 379999999
Q ss_pred cCCCCeEEEEEeCCCcC--ccCH---HHHHHHHhc--CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 260 LKSNDLFLIFASDGLWE--QLSD---EAAVEIVSR--NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 260 L~~~d~fLVL~SDGlwd--~ls~---~ei~~iv~~--~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
++++| +|||||||||| .+++ +++..++.. +++++++.|++.|+.+++. ||+|+|+|.
T Consensus 570 L~~gD-~lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~gg~--DNITvIvV~ 633 (645)
T PRK14559 570 IEEDT-LLLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQYNGH--DNITAILVR 633 (645)
T ss_pred cCCCC-EEEEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC--CcEEEEEEE
Confidence 99887 67799999999 4554 445666655 4778999999999999998 999999987
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-28 Score=218.49 Aligned_cols=267 Identities=23% Similarity=0.303 Sum_probs=182.5
Q ss_pred hhhhhccCCCCCCCCCcceeecccCCCccCccceeeec-------cccccccceEEe-------------cCCCceEEEE
Q 020117 7 RPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQ-------ANSMLEDQGQVF-------------TSPSATYVGV 66 (331)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~r~~~ED~~~~~-------------~~~~~~l~~V 66 (331)
+-+|+--|+++-+|+...+-++|.+.+. -..+...+ .++.+.|+-..- ..-++.+|.+
T Consensus 72 ~rmp~~~gyae~inagkt~~nedqas~~--~l~~~~~~gs~t~~~n~n~~~~~~~l~~g~~~~~k~~~~a~~~~~~~~sl 149 (493)
T KOG1323|consen 72 HRMPLYVGYAEAINAGKTVQNEDQASAK--MLVLTQHQGSETRKRNSNENDDDPMLTPGGDDTVKSSMFAPRADGALFSL 149 (493)
T ss_pred ccCchhhhHHHHhhcCccccccccccce--EEEEecccCccccCCCCCccccCcCCCCCCCcchhhcccCCCCcceeeee
Confidence 3467777888889999999999987664 11222222 233444443222 1226799999
Q ss_pred ecCCChhHHHHHHHHHHHHHHHhhhh----h-----------------------------------cCCCcHHHHHHHHH
Q 020117 67 YDGHGGPEASRFITRHLFPFLHKFTT----E-----------------------------------QGGLSAEVIKKAFD 107 (331)
Q Consensus 67 ~DGhGG~~as~~a~~~l~~~l~~~~~----~-----------------------------------~~~~~~~~l~~a~~ 107 (331)
||||.|..+|-.+++.+...+.+... . .+.....+|+.||+
T Consensus 150 fdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LViGAlEsAFq 229 (493)
T KOG1323|consen 150 FDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVIGALESAFQ 229 (493)
T ss_pred ecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhHHHHHHHHH
Confidence 99999999777776666655543110 0 01112457888999
Q ss_pred HHHHHHHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHH
Q 020117 108 ATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRK 187 (331)
Q Consensus 108 ~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ 187 (331)
.++++|.+..+. -....|||+++++..-+++|+||.||||++++|++ .++.|+++-+|+.+. +
T Consensus 230 emDeqiarer~~------~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnd---------eirplS~efTPetER--q 292 (493)
T KOG1323|consen 230 EMDEQIARERQV------WRLPGGCTALVVIVLLGKLYVANAGDSRAILVRND---------EIRPLSKEFTPETER--Q 292 (493)
T ss_pred HHHHHHHHHHHh------hcCCCCceEEEeeeeccceEEccCCCceEEEEecC---------CeeecccccCcHHHH--H
Confidence 999888764321 12336888888888999999999999999999998 699999999997654 4
Q ss_pred HHHhh---CC-------------CC------Cc-------------------------eEEeeCCeeeecCccccccccc
Q 020117 188 EVEAL---HP-------------DD------SH-------------------------IVVFSRGVWRIKGIIQVSRSIG 220 (331)
Q Consensus 188 ri~~~---~~-------------~~------~~-------------------------~~~~~~~~~rv~G~l~ltRalG 220 (331)
|++.. .| .+ +. .+.......|+.+.+.+||.||
T Consensus 293 RlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlG 372 (493)
T KOG1323|consen 293 RLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLG 372 (493)
T ss_pred HHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccC
Confidence 44322 11 00 11 1111111126778899999999
Q ss_pred ccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCC----CCeEEEEEeCCCcCccCHHHHHHHHhcC------
Q 020117 221 DVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKS----NDLFLIFASDGLWEQLSDEAAVEIVSRN------ 290 (331)
Q Consensus 221 d~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~----~d~fLVL~SDGlwd~ls~~ei~~iv~~~------ 290 (331)
|..+|....+ -.-+|++++.|+|+.++|.+ .|..+||+||||||++|++|++.+|+..
T Consensus 373 DH~Lkv~dsn------------l~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp 440 (493)
T KOG1323|consen 373 DHHLKVVDSN------------LSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDP 440 (493)
T ss_pred cceeeeecCC------------cccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCC
Confidence 9998765421 11268899999999999874 2448999999999999999999999872
Q ss_pred --cc---chHHHHHHHhcC
Q 020117 291 --PR---SVRPQLKTYAVY 304 (331)
Q Consensus 291 --~~---~~a~~L~~~a~~ 304 (331)
|. .+++.|+..|..
T Consensus 441 ~Dp~RYt~aaqdlva~arg 459 (493)
T KOG1323|consen 441 ADPSRYTQAAQDLVAAARG 459 (493)
T ss_pred CChhHHHHHHHHHHHHhcC
Confidence 21 366777776654
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.85 E-value=8.9e-20 Score=164.18 Aligned_cols=186 Identities=22% Similarity=0.249 Sum_probs=121.5
Q ss_pred cccccceEEecCCCceEEEEecCCChhH-----HHHHHHHHHHHHHHhhh---hhcCCCcHHHHHHHHHHHHHHHHHHHH
Q 020117 47 SMLEDQGQVFTSPSATYVGVYDGHGGPE-----ASRFITRHLFPFLHKFT---TEQGGLSAEVIKKAFDATEEEFLHLVK 118 (331)
Q Consensus 47 ~~~ED~~~~~~~~~~~l~~V~DGhGG~~-----as~~a~~~l~~~l~~~~---~~~~~~~~~~l~~a~~~~~~~l~~~~~ 118 (331)
+.-||+|++..++...+.|||||+|||. .+.|.. .|.....+.. ......+...|.+++.++-++
T Consensus 89 ~~GEDa~Fvss~~~~~v~GVADGVGGWa~~GiDpg~fS~-eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~~------ 161 (330)
T KOG1379|consen 89 KGGEDAWFVSSNPHAIVMGVADGVGGWAEYGIDPGAFSR-ELMSNCERLVQNSDFNPSDPVNLLEKAYAELKSQ------ 161 (330)
T ss_pred CCCCcceeeccCcccceEEEccccchHhhcCcCHHHHHH-HHHHHHHHHhcccccCCCChHHHHHHHHHHHhhc------
Confidence 3579999999999999999999999998 566643 3333333322 222334566666666444321
Q ss_pred hhcccCCCccCcCceEEEEEEE--CCEEEEEEcCCceEEEeeeecCCcccceeeeecccC--CCCCCCHHHHHHHHhhCC
Q 020117 119 RSWSARPQIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSV--DHNVGVEEVRKEVEALHP 194 (331)
Q Consensus 119 ~~~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~--dH~~~~~~e~~ri~~~~~ 194 (331)
....-.+||++++.+. +++|++||+|||...++|++ ++..-|. .|-.+-+.. ....|
T Consensus 162 ------~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G---------~vv~~S~~Q~H~FN~PyQ----Ls~~p 222 (330)
T KOG1379|consen 162 ------KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREG---------KVVFRSPEQQHYFNTPYQ----LSSPP 222 (330)
T ss_pred ------CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECC---------EEEEcCchheeccCCcee----eccCC
Confidence 1122356777777777 88999999999999999998 4444443 232222110 00000
Q ss_pred CCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCC
Q 020117 195 DDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGL 274 (331)
Q Consensus 195 ~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGl 274 (331)
++ ...+++|. | ...++..++++++| .||||||||
T Consensus 223 ~~------------------~~~~~~d~----p-----------------------~~ad~~~~~v~~GD-vIilATDGl 256 (330)
T KOG1379|consen 223 EG------------------YSSYISDV----P-----------------------DSADVTSFDVQKGD-VIILATDGL 256 (330)
T ss_pred cc------------------ccccccCC----c-----------------------cccceEEEeccCCC-EEEEecccc
Confidence 00 11123331 1 14568899999999 788999999
Q ss_pred cCccCHHHHHHHHhcC-------ccchHHHHHHHhcC
Q 020117 275 WEQLSDEAAVEIVSRN-------PRSVRPQLKTYAVY 304 (331)
Q Consensus 275 wd~ls~~ei~~iv~~~-------~~~~a~~L~~~a~~ 304 (331)
||+|.+++|.+++... ++..|+.+++.|..
T Consensus 257 fDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ 293 (330)
T KOG1379|consen 257 FDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARE 293 (330)
T ss_pred cccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHH
Confidence 9999999999999762 56677777766654
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.83 E-value=1.1e-19 Score=160.42 Aligned_cols=181 Identities=23% Similarity=0.337 Sum_probs=99.4
Q ss_pred eeeccccccccceEEecCCCceEEEEecCCChhH----HHHHHHHHHHHHHHhhhhhcCCCcHHH-HHHHHHHHHHHHHH
Q 020117 41 AVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPE----ASRFITRHLFPFLHKFTTEQGGLSAEV-IKKAFDATEEEFLH 115 (331)
Q Consensus 41 ~~~~~r~~~ED~~~~~~~~~~~l~~V~DGhGG~~----as~~a~~~l~~~l~~~~~~~~~~~~~~-l~~a~~~~~~~l~~ 115 (331)
+..+.+.+|||++.+...+++.+++|+||+||.. +|+.+++.+.+++.+.... .... ....+..+.+++..
T Consensus 4 sh~~~~~~nqD~~~~~~~~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~ 79 (212)
T PF13672_consen 4 SHRGRGAPNQDAFGIRTDDDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQ----ESPSSIEALIRAIKKEILS 79 (212)
T ss_dssp ---TTSSS--EEEEEE-TCCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCC----HHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCCEEeeeCCCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccc----cchHHHHHHHHHHHHHHHH
Confidence 4455688999999988888888999999999555 5555666665555543321 1111 33333344443332
Q ss_pred HH---HhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhh
Q 020117 116 LV---KRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEAL 192 (331)
Q Consensus 116 ~~---~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~ 192 (331)
.. .+...........+||++++++.++.++++|+||||+|+...+ + .+..++.+|+.. ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~---g-----~~~~l~~~~~~~-------~~~- 143 (212)
T PF13672_consen 80 IVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRN---G-----EIQQLTDDHSGE-------YPN- 143 (212)
T ss_dssp HH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEET---T-----EEEE-S---BHH-------HHH-
T ss_pred HhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECC---C-----EEEEcCCCccch-------hhh-
Confidence 11 0000112244557899999999999999999999999766543 3 688899999621 110
Q ss_pred CCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeC
Q 020117 193 HPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASD 272 (331)
Q Consensus 193 ~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SD 272 (331)
.++.+..... . ...++..++++++|. |+||||
T Consensus 144 ----------------------~~~~~~~~~~---~----------------------~~~~~~~~~~~~~d~-ilL~SD 175 (212)
T PF13672_consen 144 ----------------------QTRSLTGDDP---E----------------------PDVQYGSIPLEEGDV-ILLCSD 175 (212)
T ss_dssp ----------------------CTTSCCHHCC---C----------------------TETEEEEEE--TT-E-EEEE-H
T ss_pred ----------------------hhhccCcccc---c----------------------cCCeEEEEEcCCCCE-EEEECc
Confidence 1223332111 0 134677788888995 568999
Q ss_pred CCcCccCHHH-HHHHHhc
Q 020117 273 GLWEQLSDEA-AVEIVSR 289 (331)
Q Consensus 273 Glwd~ls~~e-i~~iv~~ 289 (331)
|||+.+.+.+ +..++.+
T Consensus 176 G~~~~l~~~~~~~~~l~~ 193 (212)
T PF13672_consen 176 GVWDNLRSYEDLEQFLKD 193 (212)
T ss_dssp HHHTTS-HHHHHHHH---
T ss_pred CccccCCCHHHHHHHhhh
Confidence 9999998665 7777765
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.81 E-value=3.2e-19 Score=179.32 Aligned_cols=217 Identities=19% Similarity=0.239 Sum_probs=176.9
Q ss_pred CCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHHHHHHhhcccCCCccCcCceEEEE
Q 020117 58 SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVG 137 (331)
Q Consensus 58 ~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~ 137 (331)
....+.||.+||-+.....+++...+.+++.+...... ...+.|+.+|...++++.... ..-|..++.+
T Consensus 548 ~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~-~et~~mr~~fl~~~rklg~~g----------~~lg~~~~~~ 616 (1081)
T KOG0618|consen 548 LNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYG-NETEQMRNTFLRLNRKLGEEG----------QVLGGSVVLC 616 (1081)
T ss_pred cCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHhhhhhhhh----------ccccchhhhe
Confidence 34578999999999999999999999999988665443 345679999999999985432 1134555555
Q ss_pred EEEC--------CEEEEEEcCCceEEEeeeecCCcccceeeeecccCCC-CCCCHHHHHHHHhhCCCCCceEEeeCCeee
Q 020117 138 VIAK--------DVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDH-NVGVEEVRKEVEALHPDDSHIVVFSRGVWR 208 (331)
Q Consensus 138 ~i~~--------~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH-~~~~~~e~~ri~~~~~~~~~~~~~~~~~~r 208 (331)
.+.. .++++||+|+|.+++++++ ...++|+-. ...+++|.+||...+ +++.. ++ +
T Consensus 617 ~i~~d~~~~asS~~l~~Anvg~c~avls~ng---------~~~p~t~~~~~~v~~eE~~RI~~~~----g~i~e-d~--k 680 (1081)
T KOG0618|consen 617 QIVEDSLSPASSKTLFAANVGTCMAVLSRNG---------KPLPTTRSPMLEVDREEYKRIVDSK----GFITE-DN--K 680 (1081)
T ss_pred eecccccCcccchhhhHhhhccchhhhhhcC---------CcCcccccccccCCHHHHHHHHHhc----CeecC-CC--e
Confidence 5543 4789999999999999998 355555554 444889999999874 44432 33 8
Q ss_pred ecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccCHHHHHHHHh
Q 020117 209 IKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVS 288 (331)
Q Consensus 209 v~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls~~ei~~iv~ 288 (331)
++|....||++|.+... |.|-+.|+|..+.|++.|+|||+|+-+||++||.+++++.++
T Consensus 681 ~ngvt~~tR~iG~~~l~---------------------P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vR 739 (1081)
T KOG0618|consen 681 LNGVTSSTRAIGPFSLF---------------------PHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVR 739 (1081)
T ss_pred eeceeeeeeeccccccc---------------------ccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHh
Confidence 99999999999987653 678999999999999999999999999999999999999999
Q ss_pred c--CccchHHHHHHHhcCCCCcccCCceEEEEeeeeEe
Q 020117 289 R--NPRSVRPQLKTYAVYPSQVWDRPMSFILHASYLSF 324 (331)
Q Consensus 289 ~--~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~~~~~~ 324 (331)
+ +|-.+|++|+++|..-|.. +|++++||+.+..+
T Consensus 740 n~~dpL~AAkKL~d~AqSYgc~--~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 740 NVEDPLLAAKKLCDLAQSYGCA--ENVSVLVVRLNHLE 775 (1081)
T ss_pred cCCchHHHHHHHHHHHHhcccc--cCeeEEEEEeecch
Confidence 7 4677999999999999999 99999999977654
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.75 E-value=9.3e-17 Score=139.73 Aligned_cols=175 Identities=18% Similarity=0.132 Sum_probs=124.4
Q ss_pred eccccccccceEEecCC-CceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHHHHHHhhc
Q 020117 43 VQANSMLEDQGQVFTSP-SATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSW 121 (331)
Q Consensus 43 ~~~r~~~ED~~~~~~~~-~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~ 121 (331)
.++....-|.|.++..+ +..+++|+||||+...|.+++..+...+.+..... ..+.+.+..+++.+...
T Consensus 11 ~p~~~~~GD~~~~~~~~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~-----~~~~~~l~~~n~~l~~~----- 80 (193)
T smart00331 11 EDATQVGGDFYDVVKLPEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG-----ISLSQILERLNRAIYEN----- 80 (193)
T ss_pred cchHhcCccEEEEEEeCCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC-----CCHHHHHHHHHHHHHhc-----
Confidence 34466778998777654 47899999999988888888888888887654432 12556666777776542
Q ss_pred ccCCCccCcCceEEEEEE--ECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCce
Q 020117 122 SARPQIASVGSCCLVGVI--AKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHI 199 (331)
Q Consensus 122 ~~~~~~~~~GtT~~~~~i--~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~ 199 (331)
....+|+|++++++ ..++++++|+||+|+++++.+ + ...+.+.+
T Consensus 81 ----~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~---~-----~~~~~~~~---------------------- 126 (193)
T smart00331 81 ----GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRAD---G-----GLVEDLDD---------------------- 126 (193)
T ss_pred ----CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECC---C-----CeEEEcCC----------------------
Confidence 12346899999888 578999999999999999943 1 12222222
Q ss_pred EEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccC
Q 020117 200 VVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLS 279 (331)
Q Consensus 200 ~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls 279 (331)
.++.+|.... .+++...+.++++|. |+|+||||||.++
T Consensus 127 ---------------~~~~lG~~~~--------------------------~~~~~~~~~l~~gd~-l~l~TDGl~e~~~ 164 (193)
T smart00331 127 ---------------LGAPLGLEPD--------------------------VEVDVRELTLEPGDL-LLLYTDGLTEARN 164 (193)
T ss_pred ---------------CCceeeeCCC--------------------------CcceeEEEeeCCCCE-EEEECCCccccCC
Confidence 2344554221 146677889999994 6689999999999
Q ss_pred HHHHHHHHhcC----ccchHHHHHHHhc
Q 020117 280 DEAAVEIVSRN----PRSVRPQLKTYAV 303 (331)
Q Consensus 280 ~~ei~~iv~~~----~~~~a~~L~~~a~ 303 (331)
.+++.+++.++ +++.++++.+.+.
T Consensus 165 ~~~l~~~l~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 165 PERLEELLEELLGSPPAEIAQRILEELL 192 (193)
T ss_pred hHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 99999999884 4555666665543
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.52 E-value=5.4e-13 Score=138.05 Aligned_cols=190 Identities=17% Similarity=0.174 Sum_probs=130.0
Q ss_pred eeccccccccceEEec-CCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHHHHHHhh
Q 020117 42 VVQANSMLEDQGQVFT-SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRS 120 (331)
Q Consensus 42 ~~~~r~~~ED~~~~~~-~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~ 120 (331)
...++..+.|.|.+.. +++...++|+||+|....|..++..+.+.+.+.... ... ...++..+|..+....
T Consensus 560 ~k~g~~vsGD~y~~~~l~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~--g~~---~~~ai~~lN~~L~~~~--- 631 (764)
T TIGR02865 560 AKDGELVSGDSYSFGKLSAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLES--GFD---REVAIKTVNSILSLRS--- 631 (764)
T ss_pred cCCCCcccCceEEEEEECCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHc--CCC---HHHHHHHHHHHHHhCC---
Confidence 3345778999998775 455578999999995554445555555555554322 112 3556667776664321
Q ss_pred cccCCCccCcCceEEEEEEE--CCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCc
Q 020117 121 WSARPQIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSH 198 (331)
Q Consensus 121 ~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~ 198 (331)
...+.+|+.+++++ .+++.++|+|+++.|+.|++ .+++++..+.|
T Consensus 632 ------~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~---------~v~~i~s~~lP------------------ 678 (764)
T TIGR02865 632 ------TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGA---------KVEVIRSSNLP------------------ 678 (764)
T ss_pred ------CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECC---------EEEEecCCCce------------------
Confidence 12257899888885 78999999999999998876 45555432221
Q ss_pred eEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCcc
Q 020117 199 IVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQL 278 (331)
Q Consensus 199 ~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~l 278 (331)
+|-.. . .+++....+++++| +||++||||||..
T Consensus 679 --------------------lGil~--~------------------------~~~~~~~~~L~~GD-~Lll~SDGv~E~~ 711 (764)
T TIGR02865 679 --------------------IGILD--E------------------------VDVELVRKKLKNGD-LIVMVSDGVLEGE 711 (764)
T ss_pred --------------------eEecc--C------------------------CccceEEEEeCCCC-EEEEECCCCCcCC
Confidence 22110 0 14566778999999 5779999999988
Q ss_pred CHHH-----HHHHHhc----CccchHHHHHHHhcCCC-CcccCCceEEEEe
Q 020117 279 SDEA-----AVEIVSR----NPRSVRPQLKTYAVYPS-QVWDRPMSFILHA 319 (331)
Q Consensus 279 s~~e-----i~~iv~~----~~~~~a~~L~~~a~~~~-~~~~dn~s~ivv~ 319 (331)
++++ +.+++++ +|++.++.|++.+.... +...||+|+++++
T Consensus 712 ~~~~~~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~~~~~DD~Tvlvir 762 (764)
T TIGR02865 712 KEVEGKVLWLVRKLKETNTNDPEEIAEYLLEKAKELRSGKIKDDMTVIVAK 762 (764)
T ss_pred cccccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEE
Confidence 7543 7777764 57889999999988643 3457999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.29 E-value=4e-10 Score=97.69 Aligned_cols=176 Identities=16% Similarity=0.195 Sum_probs=110.8
Q ss_pred CCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHHHHHHhhcccCCCccCcCceEEEEE
Q 020117 59 PSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGV 138 (331)
Q Consensus 59 ~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~ 138 (331)
++..++.|+|+.|-.-.|.+.+..+...+......... ..+.+..+++.+..... . ....+|++++.
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~-----p~~~l~~ln~~l~~~~~----~----~~~~~t~~~~~ 68 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD-----PEELLEALNRRLYRDLK----G----DNRYATACYAI 68 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS-----HHHHHHHHHHHHHHHTT----T----TSTTEEEEEEE
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC-----HHHHHHHHHHHHHHHhh----h----ccccceEEEEE
Confidence 45678999999995555555566666666655432211 45556666777644321 1 12467787777
Q ss_pred EE--CCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEEeeCCeeeecCccccc
Q 020117 139 IA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVS 216 (331)
Q Consensus 139 i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~lt 216 (331)
+. .+.++++|+|++++++++++. + ....+.....
T Consensus 69 ~d~~~~~l~~~~aG~~~~l~~~~~~--~-----~~~~~~~~~~------------------------------------- 104 (193)
T PF07228_consen 69 IDPETGTLTYANAGHPPPLLLRPGG--R-----EIEQLESEGP------------------------------------- 104 (193)
T ss_dssp EETTTTEEEEEEESSSEEEEEETTC--T-----EEEEETCSSB-------------------------------------
T ss_pred ecccceEEEEeCCCCCCEEEEeccc--c-----ceeecccCcc-------------------------------------
Confidence 65 678999999999999999851 1 1111111110
Q ss_pred ccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccCHH-------HHHHHHhc
Q 020117 217 RSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDE-------AAVEIVSR 289 (331)
Q Consensus 217 RalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls~~-------ei~~iv~~ 289 (331)
.+|-..- .++....+.+.++|. |+|+||||+|....+ ++.+++.+
T Consensus 105 -~lG~~~~--------------------------~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~ 156 (193)
T PF07228_consen 105 -PLGIFED--------------------------IDYQEQEIQLEPGDR-LLLYTDGLFEALNEDGEFFGEERLLELLDE 156 (193)
T ss_dssp -BCSSSCT--------------------------TCEEEEEEE--TTEE-EEEECHHHCTTTCHHCHHCCCHHHHHHHHC
T ss_pred -ceeeecc--------------------------ccccceEEEeccccE-EEEeCCChhhccCCccchhHHHHHHHHHhh
Confidence 1332111 145567889999995 779999999998433 44566664
Q ss_pred ----CccchHHHHHHHhcC-CCCcccCCceEEEEe
Q 020117 290 ----NPRSVRPQLKTYAVY-PSQVWDRPMSFILHA 319 (331)
Q Consensus 290 ----~~~~~a~~L~~~a~~-~~~~~~dn~s~ivv~ 319 (331)
.+++.++.+.+.+.. .+....|++|+++++
T Consensus 157 ~~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~ 191 (193)
T PF07228_consen 157 NRGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIR 191 (193)
T ss_dssp HTTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEE
Confidence 367788888888776 445677999999986
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.13 E-value=0.00026 Score=67.94 Aligned_cols=190 Identities=15% Similarity=0.142 Sum_probs=115.2
Q ss_pred ccccccceEEec-CCCceEEEEecCCC-hhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHHHHHHhhccc
Q 020117 46 NSMLEDQGQVFT-SPSATYVGVYDGHG-GPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSA 123 (331)
Q Consensus 46 r~~~ED~~~~~~-~~~~~l~~V~DGhG-G~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~ 123 (331)
+..-=|+|-++. ++....++|.|..| |-.||-. .......+........-.+. +.+..+++.+....
T Consensus 159 ~~vGGD~yd~~~~~~~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p~----~~l~~~n~~~~~~~------ 227 (367)
T COG2208 159 SEVGGDYYDFIQLGEKRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDPA----DVLETLNRVLKQNL------ 227 (367)
T ss_pred HHcCCceEEEEEECCcEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCHH----HHHHHHHHHHHhcc------
Confidence 445567776554 44688999999998 6666655 33333333332222122222 33444454443321
Q ss_pred CCCccCcCceEEEEEEE--CCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEE
Q 020117 124 RPQIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVV 201 (331)
Q Consensus 124 ~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~ 201 (331)
. ..+=+|+...+++ .+.+..+|+|=--+++.+.+ +. .....++
T Consensus 228 --~-~~~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~---~~---~~~~~l~-------------------------- 272 (367)
T COG2208 228 --E-EDMFVTLFLGVYDLDSGELTYSNAGHEPALILSAD---GE---IEVEDLT-------------------------- 272 (367)
T ss_pred --c-CCcEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcC---CC---ceeEEcc--------------------------
Confidence 0 1134677776665 67899999999999888876 10 0000000
Q ss_pred eeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcC-----
Q 020117 202 FSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWE----- 276 (331)
Q Consensus 202 ~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd----- 276 (331)
.....+|...- ..+.+....++++| .+|+.|||+.+
T Consensus 273 ------------~~g~piG~~~~--------------------------~~~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~ 313 (367)
T COG2208 273 ------------ALGLPIGLLPD--------------------------YQYEVASLQLEPGD-LLVLYTDGVTEARNSD 313 (367)
T ss_pred ------------CCCceeeecCC--------------------------ccchheeEEecCCC-EEEEEcCCeeeeecCC
Confidence 13445554321 25567788999988 68899999999
Q ss_pred --ccCHHHHHHHHhc----CccchHHHHHHHhcC--CCCcccCCceEEEEee
Q 020117 277 --QLSDEAAVEIVSR----NPRSVRPQLKTYAVY--PSQVWDRPMSFILHAS 320 (331)
Q Consensus 277 --~ls~~ei~~iv~~----~~~~~a~~L~~~a~~--~~~~~~dn~s~ivv~~ 320 (331)
.+..+...+++.+ .++++++.+.+.... ....++|++|+++++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~~~~~~~DDiTll~lk~ 365 (367)
T COG2208 314 GEFFGLERLLKILGRLLGQPAEEILEAILESLEELQGDQIQDDDITLLVLKV 365 (367)
T ss_pred ccEecHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhCCccccCceEEEEEEe
Confidence 6667777777774 356666666554443 4445678899999874
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=81.71 E-value=21 Score=33.12 Aligned_cols=101 Identities=12% Similarity=0.007 Sum_probs=55.0
Q ss_pred ccccccceEEe-cCCCceEEEEec--CCChhH--HHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHHHHHHhh
Q 020117 46 NSMLEDQGQVF-TSPSATYVGVYD--GHGGPE--ASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRS 120 (331)
Q Consensus 46 r~~~ED~~~~~-~~~~~~l~~V~D--GhGG~~--as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~ 120 (331)
....=|.+.++ .+++...|-++| ||||+. +|-.+...+...+......... ........+..+|+.+.+..
T Consensus 147 ~~~~GD~~d~~~l~~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~-~~~~p~~~l~~lN~~l~~~~--- 222 (303)
T PRK10693 147 ADKPGLVLDIAALSDNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQ-RLPELGALLKQVNHLLRQAN--- 222 (303)
T ss_pred CCCCccEEeeeecCCCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhccccc-ccCCHHHHHHHHHHHHHhcC---
Confidence 34456666555 355666666666 787555 4444433344455443211111 00013445566677665521
Q ss_pred cccCCCccCcCceEEEEEEE--CCEEEEEEcCCceEEEe
Q 020117 121 WSARPQIASVGSCCLVGVIA--KDVLYVANLGDSRAVLG 157 (331)
Q Consensus 121 ~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~ 157 (331)
... --|++.++++ .+++.++|.|-...++.
T Consensus 223 ---~~~----~~t~~~~~~d~~~~~l~~~~AGhp~~~~~ 254 (303)
T PRK10693 223 ---LPG----QFPLLVGYYHRELKNLILVSAGLNATLNT 254 (303)
T ss_pred ---CCc----eeeEEEEEEEcCCCeEEEEeCCCCCEEec
Confidence 111 1477776775 56899999999998853
No 21
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=77.66 E-value=0.87 Score=34.63 Aligned_cols=63 Identities=19% Similarity=0.303 Sum_probs=43.7
Q ss_pred EEcCCCCeEEEEEeCCCcCccCHHHHHHHHhcCccchHHHHHHHhcCCCCcccCCceE-EEEeeeeEe
Q 020117 258 RKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRSVRPQLKTYAVYPSQVWDRPMSF-ILHASYLSF 324 (331)
Q Consensus 258 ~~L~~~d~fLVL~SDGlwd~ls~~ei~~iv~~~~~~~a~~L~~~a~~~~~~~~dn~s~-ivv~~~~~~ 324 (331)
.-++++|. ++|..|||+-.+...+..+-++..|-+ +-.|.+-..++|-. ++++- |+..+|..|
T Consensus 20 ~~l~~~D~-vlL~qdGV~aAl~~~~~~~sl~~~p~~-~~alkeDl~ARGl~--~~~s~~v~~i~y~~f 83 (96)
T COG2168 20 RLLTEGDA-VLLLQDGVYAALKGNRYLASLRESPIK-VYALKEDLLARGLT--GQISREVILIDYTEF 83 (96)
T ss_pred HHhcccCe-EEEEcccchhhhcCcHHHHHHhcCccc-eeeehhhHHhccch--hhcCcceeEeeHHHH
Confidence 34567886 558999999999999999999988733 33344444545555 66666 555566544
No 22
>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed
Probab=48.79 E-value=53 Score=26.01 Aligned_cols=43 Identities=9% Similarity=0.241 Sum_probs=34.4
Q ss_pred CceeeeeeEEEEEcCCCCeEEEEEeCCCcC-------ccCHHHHHHHHhc
Q 020117 247 AVMTAEPSILIRKLKSNDLFLIFASDGLWE-------QLSDEAAVEIVSR 289 (331)
Q Consensus 247 ~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd-------~ls~~ei~~iv~~ 289 (331)
-+|+..|+|..++....+.|.|.+..-.-+ .+++++|.-+..+
T Consensus 37 ~~Vi~~P~V~~m~~~g~~tY~I~Ge~~~e~~~~~~~~~i~~edI~lv~~q 86 (115)
T PRK06369 37 EIVFENPQVTVMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEEDIELVAEQ 86 (115)
T ss_pred EEEEcCCeEEEEecCCCcEEEEEeccEEeeccccccCCCCHHHHHHHHHH
Confidence 458899999999998888899998877754 4677777777666
No 23
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=36.43 E-value=21 Score=25.73 Aligned_cols=21 Identities=19% Similarity=0.300 Sum_probs=15.0
Q ss_pred CCCeEEEEEeCCCcCccCHHHH
Q 020117 262 SNDLFLIFASDGLWEQLSDEAA 283 (331)
Q Consensus 262 ~~d~fLVL~SDGlwd~ls~~ei 283 (331)
+|.+|| +++||+|=.+...-+
T Consensus 26 ~G~Rll-va~nGv~lEv~r~WL 46 (72)
T PF09436_consen 26 PGHRLL-VASNGVFLEVRRPWL 46 (72)
T ss_pred CCcEEE-EecCcEEEEEechHH
Confidence 567655 799999977655443
No 24
>TIGR00264 alpha-NAC-related protein. This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.
Probab=30.74 E-value=1.6e+02 Score=23.37 Aligned_cols=43 Identities=5% Similarity=0.146 Sum_probs=34.6
Q ss_pred CceeeeeeEEEEEcCCCCeEEEEEeCCCcC-----ccCHHHHHHHHhc
Q 020117 247 AVMTAEPSILIRKLKSNDLFLIFASDGLWE-----QLSDEAAVEIVSR 289 (331)
Q Consensus 247 ~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd-----~ls~~ei~~iv~~ 289 (331)
.+|...|.|..++....+.|-|.++.-.-+ .++.++|.-+..+
T Consensus 41 ~ivf~~p~V~~m~~~G~~tYqI~G~~~~~~~~~~~~i~~eDI~lV~eq 88 (116)
T TIGR00264 41 EWIFENPKVQVMDILGVKTYQITGKPKKEKVEEEEEITEDDIELVMKQ 88 (116)
T ss_pred eEEEecCeeEEEecCCcEEEEEecccEEeecccccCCCHHHHHHHHHH
Confidence 468889999999999888899888887644 3788888777766
Done!