Query 020117
Match_columns 331
No_of_seqs 221 out of 1563
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 12:02:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020117.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020117hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p8e_A PPM1B beta isoform vari 100.0 6.4E-48 2.2E-52 358.9 20.5 249 36-319 24-296 (307)
2 2i0o_A Ser/Thr phosphatase; be 100.0 1.3E-47 4.4E-52 356.3 22.1 257 35-319 22-302 (304)
3 2pnq_A [pyruvate dehydrogenase 100.0 2.3E-47 7.9E-52 372.7 20.6 277 38-320 41-454 (467)
4 2iq1_A Protein phosphatase 2C 100.0 5.4E-46 1.8E-50 340.5 26.0 246 37-319 9-260 (274)
5 1a6q_A Phosphatase 2C; catalyt 100.0 2.1E-46 7.2E-51 358.0 22.1 249 36-319 22-290 (382)
6 3qn1_B Protein phosphatase 2C 100.0 2.8E-46 9.7E-51 352.0 19.8 247 36-319 14-326 (337)
7 3kdj_B Protein phosphatase 2C 100.0 9.8E-46 3.4E-50 345.4 22.7 237 37-319 10-303 (316)
8 3d8k_A PP2C, protein phosphata 100.0 1.4E-45 4.8E-50 351.5 24.2 240 38-319 15-322 (377)
9 2j4o_A Mitogen-activated prote 100.0 5.1E-47 1.7E-51 364.7 12.8 280 23-319 14-364 (401)
10 2irm_A Mitogen-activated prote 100.0 1.4E-46 4.7E-51 356.9 13.8 275 25-319 4-354 (358)
11 2i44_A Serine-threonine phosph 100.0 5.3E-45 1.8E-49 341.5 22.9 256 37-319 23-319 (324)
12 2isn_A NYSGXRC-8828Z, phosphat 100.0 6.5E-45 2.2E-49 345.7 23.0 243 37-319 14-331 (364)
13 4da1_A Protein phosphatase 1K, 100.0 1.7E-44 5.9E-49 346.0 24.8 256 26-319 112-374 (389)
14 2pk0_A Serine/threonine protei 100.0 7.7E-39 2.6E-43 288.6 20.4 229 37-319 7-244 (250)
15 1txo_A Putative bacterial enzy 100.0 8.7E-39 3E-43 286.0 18.8 224 38-319 7-234 (237)
16 2j82_A TPPHA, protein serine-t 100.0 3E-38 1E-42 282.8 19.6 227 38-319 3-239 (240)
17 2jfr_A Ser-Thr phosphatase MSP 100.0 3.6E-36 1.2E-40 268.5 18.9 217 38-319 8-232 (234)
18 3rnr_A Stage II sporulation E 100.0 2.9E-35 9.8E-40 259.2 12.4 202 56-319 5-210 (211)
19 3t91_A Stage II sporulation pr 99.8 9.2E-19 3.1E-23 156.5 13.0 187 45-319 19-218 (242)
20 3pu9_A Protein serine/threonin 99.8 8.5E-17 2.9E-21 144.0 20.2 187 45-319 22-222 (242)
21 3zt9_A Serine phosphatase; hyd 99.7 5.8E-15 2E-19 127.5 17.8 177 45-319 15-193 (193)
22 3f79_A Probable two-component 99.6 2.2E-15 7.6E-20 135.5 14.9 192 41-319 43-251 (255)
23 3ke6_A Protein RV1364C/MT1410; 99.0 2.8E-08 9.5E-13 94.9 19.3 184 47-320 50-256 (399)
24 3eq2_A Probable two-component 98.3 1.8E-05 6.1E-10 74.8 15.6 186 46-319 187-390 (394)
25 3q4f_C DNA repair protein XRCC 36.0 1E+02 0.0035 25.3 6.6 69 249-318 39-118 (186)
26 3mud_A DNA repair protein XRCC 30.5 1.3E+02 0.0045 24.5 6.5 68 249-317 13-91 (175)
27 3out_A Glutamate racemase; str 29.6 89 0.003 27.2 5.9 23 63-85 9-32 (268)
No 1
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=6.4e-48 Score=358.87 Aligned_cols=249 Identities=23% Similarity=0.326 Sum_probs=203.4
Q ss_pred Cccceeeecc-ccccccceEEecC-----CCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcC------------CC
Q 020117 36 GDYSIAVVQA-NSMLEDQGQVFTS-----PSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQG------------GL 97 (331)
Q Consensus 36 ~~~~~~~~~~-r~~~ED~~~~~~~-----~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~------------~~ 97 (331)
..|..+..+| |..|||++.+..+ ++..+|+|||||||+.+|+++++.+.+.+.+...... ..
T Consensus 24 ~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 103 (307)
T 2p8e_A 24 LRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVEN 103 (307)
T ss_dssp EEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------CHHH
T ss_pred eeEEEEecCCCCCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccccHHH
Confidence 4566666666 7899999987642 3578999999999999999999999999875211110 11
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCC
Q 020117 98 SAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVD 177 (331)
Q Consensus 98 ~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~d 177 (331)
..++|+++|..+++++.+... .......+|||++++++.++++|+|||||||+|++|++ .+.+||+|
T Consensus 104 ~~~~l~~a~~~~~~~i~~~~~----~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g---------~~~~lT~D 170 (307)
T 2p8e_A 104 VKNGIRTGFLKIDEYMRNFSD----LRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG---------QVCFSTQD 170 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTSTT----TC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------EEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhhhh----hccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECC---------ccccCCCC
Confidence 356788888888888765321 12234568999999999999999999999999999987 69999999
Q ss_pred CCCCCHHHHHHHHhhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEE
Q 020117 178 HNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILI 257 (331)
Q Consensus 178 H~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~ 257 (331)
|++.++.|++||...+ +.+.. .|++|.+.+||||||..+|.... .+..+|+|+++|++..
T Consensus 171 H~~~~~~E~~rI~~~g----g~v~~----~rv~g~l~ltRalGd~~~k~~~~------------~~~~~~~v~~~pdv~~ 230 (307)
T 2p8e_A 171 HKPCNPREKERIQNAG----GSVMI----QRVNGSLAVSRALGDYDYKCVDG------------KGPTEQLVSPEPEVYE 230 (307)
T ss_dssp CCTTSHHHHHHHHHTT----CCEET----TEETTTBSCSBCEECGGGSCCTT------------CCGGGSSSBCCCEEEE
T ss_pred CCCCCHHHHHHHHHcC----CEEEe----CcccCeEeccccccCHHHhcCcc------------cCCCCCeEeccCeEEE
Confidence 9999999999998873 33332 38999999999999999886431 1234578899999999
Q ss_pred EEcCCCCeEEEEEeCCCcCccCHHHHHHHHhc------CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 258 RKLKSNDLFLIFASDGLWEQLSDEAAVEIVSR------NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 258 ~~L~~~d~fLVL~SDGlwd~ls~~ei~~iv~~------~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
++++++|.|||||||||||+|+++|+++++.+ .++++|+.|++.|+.+++. ||+|+||+.
T Consensus 231 ~~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~--DNiTvivv~ 296 (307)
T 2p8e_A 231 ILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSR--DNMSIVLVC 296 (307)
T ss_dssp EECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCC--SCEEEEEEE
T ss_pred EEcCCCCeEEEEECCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC--CCeEEEEEE
Confidence 99999998999999999999999999999975 5788999999999999988 999999987
No 2
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-47 Score=356.34 Aligned_cols=257 Identities=25% Similarity=0.342 Sum_probs=204.8
Q ss_pred cCccceeeecc-ccccccceEEec--CCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHH
Q 020117 35 SGDYSIAVVQA-NSMLEDQGQVFT--SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEE 111 (331)
Q Consensus 35 ~~~~~~~~~~~-r~~~ED~~~~~~--~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~ 111 (331)
+..|..+..+| |..|||++.+.. +++..+|+|||||||+.+|+++++++.+.+.+........+.++|+++|..+++
T Consensus 22 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~l~~a~~~~~~ 101 (304)
T 2i0o_A 22 FLASGSSSMQGWRISQEDAHNCILNFDDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDA 101 (304)
T ss_dssp SEEEEEEEEEESSSCCCEEEEEEEEEETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHHHTTCHHHHHHHHHHHHHH
T ss_pred ceEEEEeecCCCCCCccCEEEEEeccCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhcccccHHHHHHHHHHHHHH
Confidence 34566666666 789999997763 467899999999999999999999999999875443345567899999999999
Q ss_pred HHHHHHHhh----cc------cCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCC
Q 020117 112 EFLHLVKRS----WS------ARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVG 181 (331)
Q Consensus 112 ~l~~~~~~~----~~------~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~ 181 (331)
.+.+..... .. .......+|||++++++.++++|+|||||||+|++|++ .+++||+||++.
T Consensus 102 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g---------~~~~LT~DH~~~ 172 (304)
T 2i0o_A 102 TLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNG---------KALEMSFDHKPE 172 (304)
T ss_dssp HTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETT---------EEEECCCCCCTT
T ss_pred HHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECC---------EEEEcCCCcCCc
Confidence 876542100 00 11124568999999999999999999999999999987 799999999999
Q ss_pred CHHHHHHHHhhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcC
Q 020117 182 VEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLK 261 (331)
Q Consensus 182 ~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~ 261 (331)
++.|+.||...+ +.+.. . .|++|.+++||||||..+|... ..|+++++|+++|++..++|+
T Consensus 173 ~~~e~~rI~~~g----g~v~~-~--~rv~g~l~ltRalGd~~~k~~~------------~l~~~~~~v~~~pdi~~~~l~ 233 (304)
T 2i0o_A 173 DTVEYQRIEKAG----GRVTL-D--GRVNGGLNLSRAIGDHGYKMNK------------SLPAEEQMISALPDIEKITVG 233 (304)
T ss_dssp SHHHHHHHHHTT----CCBCT-T--SCBTTSCSCSBCEECGGGCCCT------------TSCGGGSSSBCCCEEEEEECC
T ss_pred CHHHHHHHHhCC----CEEEe-C--CeEcCceeccccccCHHHccCc------------cCCccCCeEEeeCeEEEEEcC
Confidence 999999999874 22221 1 3889999999999999887543 124456789999999999999
Q ss_pred CCCeEEEEEeCCCcCccCHHHHHHHHhc-------CccchHHHHHHHhcCCC----CcccCCceEEEEe
Q 020117 262 SNDLFLIFASDGLWEQLSDEAAVEIVSR-------NPRSVRPQLKTYAVYPS----QVWDRPMSFILHA 319 (331)
Q Consensus 262 ~~d~fLVL~SDGlwd~ls~~ei~~iv~~-------~~~~~a~~L~~~a~~~~----~~~~dn~s~ivv~ 319 (331)
++|.|||||||||||+|+++|+++++.+ .++++|+.|++.|+.++ ....||+|+|||.
T Consensus 234 ~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~ 302 (304)
T 2i0o_A 234 PEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQ 302 (304)
T ss_dssp TTEEEEEEECHHHHTTCCHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHC------------CEEEEEEE
T ss_pred CCCeEEEEECcCccccCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEE
Confidence 9999999999999999999999999974 47889999999999742 1234999999986
No 3
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=2.3e-47 Score=372.70 Aligned_cols=277 Identities=27% Similarity=0.367 Sum_probs=208.0
Q ss_pred cceeeeccccccccceEEec--CCCceEEEEecCCChhHHHHHHHHHHHHHHHhhh------hh----------------
Q 020117 38 YSIAVVQANSMLEDQGQVFT--SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFT------TE---------------- 93 (331)
Q Consensus 38 ~~~~~~~~r~~~ED~~~~~~--~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~------~~---------------- 93 (331)
|.....+.|..|||++.+.. .+++.||||||||||+.+|++++++|+..|.+.. ..
T Consensus 41 ~~s~~g~~R~~nED~~~v~~~~~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~ 120 (467)
T 2pnq_A 41 FDSNRLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQ 120 (467)
T ss_dssp EEEEEECCSSSCCEEEEEEEESSSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEE
T ss_pred EEeeccCCCCCCCCceeeeeccCCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccccccccc
Confidence 44444455999999997764 4678999999999999999999999998875321 00
Q ss_pred ------------------------------------cCCCcHHHHHHHHHHHHHHHHHHHHhhc------ccCCCccCcC
Q 020117 94 ------------------------------------QGGLSAEVIKKAFDATEEEFLHLVKRSW------SARPQIASVG 131 (331)
Q Consensus 94 ------------------------------------~~~~~~~~l~~a~~~~~~~l~~~~~~~~------~~~~~~~~~G 131 (331)
......++|+++|.++|+.|.+...... ........+|
T Consensus 121 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~G 200 (467)
T 2pnq_A 121 WHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSG 200 (467)
T ss_dssp ECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSE
T ss_pred ccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCc
Confidence 0114678899999999999987653210 0011234589
Q ss_pred ceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEEeeCCeeeecC
Q 020117 132 SCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKG 211 (331)
Q Consensus 132 tT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G 211 (331)
||++++++.++++|+|||||||+|+++.+.+ | +|.+++||.||++.++.|++||.+.||.........+ .|++|
T Consensus 201 tTa~v~li~~~~l~vAnvGDSRa~l~r~~~~-g---~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~--~Rv~G 274 (467)
T 2pnq_A 201 ATACVAHVDGVDLHVANTGDSRAMLGVQEED-G---SWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQ--DRLLG 274 (467)
T ss_dssp ECEEEEEEETTEEEEEEESSCEEEEEEECTT-S---CEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSS--SSBTT
T ss_pred ceEEEEEEECCEEEEEECCCceEEEEEecCC-C---cEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEec--Ccccc
Confidence 9999999999999999999999999997311 2 5679999999999999999999999864211001111 28999
Q ss_pred cccccccccccccccCC----------CcC--CcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccC
Q 020117 212 IIQVSRSIGDVYLKKPE----------FSR--DHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLS 279 (331)
Q Consensus 212 ~l~ltRalGd~~~k~~~----------~~~--~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls 279 (331)
.+++||||||..+|.+. ++. ...+.++.++.+.++|+|+++|+|..++|+++|.|||||||||||+|+
T Consensus 275 ~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls 354 (467)
T 2pnq_A 275 LLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMH 354 (467)
T ss_dssp TBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSC
T ss_pred ccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCC
Confidence 99999999999988531 100 001124445556778999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC--------c------------------------------cchHHHHHHHhcCCC--C------------
Q 020117 280 DEAAVEIVSRN--------P------------------------------RSVRPQLKTYAVYPS--Q------------ 307 (331)
Q Consensus 280 ~~ei~~iv~~~--------~------------------------------~~~a~~L~~~a~~~~--~------------ 307 (331)
++|++++|... | +++|..|++.|+..+ +
T Consensus 355 ~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~ 434 (467)
T 2pnq_A 355 RQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLS 434 (467)
T ss_dssp HHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC-----------------
T ss_pred hHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhhc
Confidence 99999999752 2 668899999999875 1
Q ss_pred -------cccCCceEEEEee
Q 020117 308 -------VWDRPMSFILHAS 320 (331)
Q Consensus 308 -------~~~dn~s~ivv~~ 320 (331)
.+.||+|+|||..
T Consensus 435 ~~~~~~R~~~DdITViVv~~ 454 (467)
T 2pnq_A 435 LPEELARMYRDDITIIVVQF 454 (467)
T ss_dssp --------CCSCEEEEEEEE
T ss_pred CCccccccCCCCcEEEEEEe
Confidence 2369999999863
No 4
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.4e-46 Score=340.47 Aligned_cols=246 Identities=24% Similarity=0.351 Sum_probs=204.7
Q ss_pred ccceeeecc-ccccccceEEec-CCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHH
Q 020117 37 DYSIAVVQA-NSMLEDQGQVFT-SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFL 114 (331)
Q Consensus 37 ~~~~~~~~~-r~~~ED~~~~~~-~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~ 114 (331)
.|..+..+| |..|||++.+.. .++..+|+|||||||+.+|+++++.+.+.+.+.... ...+.+.|+++|..+++++.
T Consensus 9 ~~g~~s~~G~R~~nED~~~~~~~~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~-~~~~~~~l~~a~~~~~~~i~ 87 (274)
T 2iq1_A 9 NVGCASQIGKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK-EKNLETLLTLAFLEIDKAFS 87 (274)
T ss_dssp GCEEEEECCSSSSCCEEEEEEECSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecccCCCCccceEEEeeCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcc-cccHHHHHHHHHHHHHHHHH
Confidence 355555555 889999998774 577899999999999999999999999988776543 34467899999999999998
Q ss_pred HHHHhhcccCCCccCcCceEEEEEEEC-CEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhC
Q 020117 115 HLVKRSWSARPQIASVGSCCLVGVIAK-DVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALH 193 (331)
Q Consensus 115 ~~~~~~~~~~~~~~~~GtT~~~~~i~~-~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~ 193 (331)
+..... .......+|||++++++.+ +++|++||||||+|++|++ .+.+||.||++.++.|+.||.+.+
T Consensus 88 ~~~~~~--~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g---------~~~~lT~DH~~~~~~E~~Ri~~~g 156 (274)
T 2iq1_A 88 SHARLS--ADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------KPMKLTIDHTPERKDEKERIKKCG 156 (274)
T ss_dssp HHHHC-----CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETT---------EEEECCCCCCTTSHHHHHHHHHTT
T ss_pred HHhhhc--cccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCC---------EeeECCCCCCCcCHHHHHHHHHcC
Confidence 765321 1123456899999999985 5999999999999999987 799999999999999999998873
Q ss_pred CCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCC-CeEEEEEeC
Q 020117 194 PDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSN-DLFLIFASD 272 (331)
Q Consensus 194 ~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~-d~fLVL~SD 272 (331)
|.+.....+.+|++|.+.+|||||+..+|.. .++++|++..++|+++ |.|||||||
T Consensus 157 ---G~v~~~~~~~~~~~~~~~ltralGd~~~k~~--------------------~v~~~pdi~~~~l~~g~d~~lll~SD 213 (274)
T 2iq1_A 157 ---GFVAWNSLGQPHVNGRLAMTRSIGDLDLKTS--------------------GVIAEPETKRIKLHHADDSFLVLTTD 213 (274)
T ss_dssp ---CCEEECTTSCEEETTTBSCSBCEECGGGTTT--------------------TCBCCCEEEEEECCTTTEEEEEEECH
T ss_pred ---CEEEcCCCCceeECCeEeeccccCChhhccC--------------------CEEeCCEEEEEEeCCCCCcEEEEEcc
Confidence 3333322345688999999999999888742 3778999999999985 679999999
Q ss_pred CCcCccCHHHHHHHHhc--CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 273 GLWEQLSDEAAVEIVSR--NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 273 Glwd~ls~~ei~~iv~~--~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
||||+|+++|+.+++.+ .++++|+.|++.|+.+++. ||+|+|++.
T Consensus 214 Gl~d~l~~~ei~~~~~~~~~~~~~a~~L~~~A~~~g~~--DNiTvivv~ 260 (274)
T 2iq1_A 214 GINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTE--DNSTAVVVP 260 (274)
T ss_dssp HHHTTCCHHHHHHHHHTSSSHHHHHHHHHHHHHHTTCC--SCEEEEEEE
T ss_pred CcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHcCCC--CCeEEEEEE
Confidence 99999999999999987 5789999999999999988 999999987
No 5
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=2.1e-46 Score=357.98 Aligned_cols=249 Identities=22% Similarity=0.349 Sum_probs=206.8
Q ss_pred Cccceeeecc-ccccccceEEecC-----CCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhc-------CCCcHHHH
Q 020117 36 GDYSIAVVQA-NSMLEDQGQVFTS-----PSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQ-------GGLSAEVI 102 (331)
Q Consensus 36 ~~~~~~~~~~-r~~~ED~~~~~~~-----~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~-------~~~~~~~l 102 (331)
..|..+..+| |..|||++.+... ++..+|+|||||||+.+|+++++++.+.+.+..... .....++|
T Consensus 22 l~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~~~~~l 101 (382)
T 1a6q_A 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGI 101 (382)
T ss_dssp EEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHH
T ss_pred eEEEEEecCCCCCCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCCHHHHHHHH
Confidence 4566677777 7899999987642 356899999999999999999999999886421111 11135788
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCC
Q 020117 103 KKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGV 182 (331)
Q Consensus 103 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~ 182 (331)
+++|..+++++.+.... ......+|||++++++.++++|+|||||||+|++|++ .+.+||+||++.+
T Consensus 102 ~~af~~~n~~i~~~~~~----~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g---------~~~~LT~DHs~~~ 168 (382)
T 1a6q_A 102 RTGFLEIDEHMRVMSEK----KHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------KVHFFTQDHKPSN 168 (382)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------EEEEECCCCCTTS
T ss_pred HHHHHHHHHHHHhhhhh----ccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECC---------ceEEeCCCCCCCC
Confidence 99999999998876532 2234558999999999999999999999999999987 6999999999999
Q ss_pred HHHHHHHHhhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcC-
Q 020117 183 EEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLK- 261 (331)
Q Consensus 183 ~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~- 261 (331)
+.|++||...+ +.+.. .|++|.+.+||||||..+|.... .++.+|+|+++|++..+++.
T Consensus 169 ~~E~~RI~~~g----g~v~~----~Rv~g~l~ltRalGd~~~K~~~~------------~~~~~~~v~~~Pdv~~~~l~~ 228 (382)
T 1a6q_A 169 PLEKERIQNAG----GSVMI----QRVNGSLAVSRALGDFDYKCVHG------------KGPTEQLVSPEPEVHDIERSE 228 (382)
T ss_dssp HHHHHHHHHTT----CCEET----TEETTTBSCSBCEECGGGSCCTT------------CCGGGSSSBCCCEEEEEECCT
T ss_pred HHHHHHHHhcC----cEEec----ccccCceeeeeecCcHhhccccc------------CCCccCeeeeeeeEEEEEccC
Confidence 99999999873 33332 39999999999999999886431 12345789999999999999
Q ss_pred CCCeEEEEEeCCCcCccCHHHHHHHHhc------CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 262 SNDLFLIFASDGLWEQLSDEAAVEIVSR------NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 262 ~~d~fLVL~SDGlwd~ls~~ei~~iv~~------~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
++|.|||||||||||+|+++|+++++.. .++++|+.|++.|+.+++. ||+|+|||.
T Consensus 229 ~~dd~llLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~--DNiTvivv~ 290 (382)
T 1a6q_A 229 EDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSR--DNMSVILIC 290 (382)
T ss_dssp TTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCC--SCEEEEEEE
T ss_pred CCCeEEEEeccCccCCCChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCc--CCEEEEEEE
Confidence 7778999999999999999999999985 5788999999999999988 999999997
No 6
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=2.8e-46 Score=352.01 Aligned_cols=247 Identities=29% Similarity=0.386 Sum_probs=202.7
Q ss_pred Cccceeeecc-ccccccceEEecC----------------------CCceEEEEecCCChhHHHHHHHHHHHHHHHhhhh
Q 020117 36 GDYSIAVVQA-NSMLEDQGQVFTS----------------------PSATYVGVYDGHGGPEASRFITRHLFPFLHKFTT 92 (331)
Q Consensus 36 ~~~~~~~~~~-r~~~ED~~~~~~~----------------------~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~ 92 (331)
..|..+.++| |..|||++.+..+ .++.||||||||||+.+++++++++...|.+...
T Consensus 14 ~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~ 93 (337)
T 3qn1_B 14 PLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIE 93 (337)
T ss_dssp CCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHHH
Confidence 3478888888 7799999987532 1578999999999999999999999998876543
Q ss_pred hc-------------CCCcHHHHHHHHHHHHHHHHHHHHhhc-------ccCCCccCcCceEEEEEEECCEEEEEEcCCc
Q 020117 93 EQ-------------GGLSAEVIKKAFDATEEEFLHLVKRSW-------SARPQIASVGSCCLVGVIAKDVLYVANLGDS 152 (331)
Q Consensus 93 ~~-------------~~~~~~~l~~a~~~~~~~l~~~~~~~~-------~~~~~~~~~GtT~~~~~i~~~~l~vanvGDS 152 (331)
.. ...+.++|+++|..+++++.....+.. ........+|||++++++.++++|+||||||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDS 173 (337)
T 3qn1_B 94 RIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDS 173 (337)
T ss_dssp HTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSC
T ss_pred hhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCc
Confidence 21 122456788888888888865431100 1122345689999999999999999999999
Q ss_pred eEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCC
Q 020117 153 RAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRD 232 (331)
Q Consensus 153 R~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~ 232 (331)
|+|++|++ .+.+||+||++.++.|+.||...+ +.+....+ +|++|.+++||+|||..+|
T Consensus 174 R~~l~r~g---------~~~~lT~DH~~~~~~e~~ri~~~g----g~v~~~~~-~r~~g~l~~sRalGd~~~~------- 232 (337)
T 3qn1_B 174 RAVLFRGK---------EAMPLSVDHKPDREDEYARIENAG----GKVIQWQG-ARVFGVLAMSRSIGDRYLK------- 232 (337)
T ss_dssp EEEEEETT---------EEEESCCCCCTTSHHHHHHHHHTT----CCEEESSS-EEETTTBSCSBCEECGGGT-------
T ss_pred EEEEEeCC---------EeeeecCCCCCCCHHHHHHHHHcC----CeEEecCC-ceecCcccccccccccccc-------
Confidence 99999987 799999999999999999999874 44443322 5999999999999998775
Q ss_pred cCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccCHHHHHHHHhc-----------------------
Q 020117 233 HGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSR----------------------- 289 (331)
Q Consensus 233 ~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls~~ei~~iv~~----------------------- 289 (331)
|+++++|++..+.+.+.+.|||||||||||+|+++||+++++.
T Consensus 233 --------------~~v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (337)
T 3qn1_B 233 --------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP 298 (337)
T ss_dssp --------------TTSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCH
T ss_pred --------------CCCCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccCh
Confidence 5688999999999977666999999999999999999999974
Q ss_pred CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 290 NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 290 ~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
.++.+|+.|++.|+.+++. ||+|+|||+
T Consensus 299 ~~~~~a~~Lv~~A~~~g~~--DNiTvivv~ 326 (337)
T 3qn1_B 299 ACQAAADYLSMLALQKGSK--DNISIIVID 326 (337)
T ss_dssp HHHHHHHHHHHHHHHTTCC--SCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHcCCC--CCEEEEEEE
Confidence 2467899999999999998 999999986
No 7
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=9.8e-46 Score=345.44 Aligned_cols=237 Identities=30% Similarity=0.427 Sum_probs=194.8
Q ss_pred ccceeeecc-ccccccceEEecC-----------------CCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCC--
Q 020117 37 DYSIAVVQA-NSMLEDQGQVFTS-----------------PSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGG-- 96 (331)
Q Consensus 37 ~~~~~~~~~-r~~~ED~~~~~~~-----------------~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~-- 96 (331)
.|..+.++| |..|||++.+..+ ++..+|+|||||||+.+++++++.+.+.|.+.......
T Consensus 10 ~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~ 89 (316)
T 3kdj_B 10 LYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPML 89 (316)
T ss_dssp CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred eEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 477888887 7899999987532 36789999999999999999999999988765433211
Q ss_pred --------CcHHHHHHHHHHHHHHHHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccce
Q 020117 97 --------LSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNML 168 (331)
Q Consensus 97 --------~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ 168 (331)
...++|+++|..+++++.. .....+|||++++++.++++|+|||||||+|++|++
T Consensus 90 ~~~~~~~~~~~~~l~~a~~~~~~~~~~---------~~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g-------- 152 (316)
T 3kdj_B 90 SDGDTWLEKWKKALFNSFLRVDSEIES---------VAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGK-------- 152 (316)
T ss_dssp GGTHHHHHHHHHHHHHHHHHHHHHGGG---------TSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETT--------
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHhc---------ccCCCCCCcEEEEEEECCEEEEEEccCCEEEEEECC--------
Confidence 1345666777777666532 123458999999999999999999999999999987
Q ss_pred eeeecccCCCCCCCHHHHHHHHhhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCc
Q 020117 169 VVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAV 248 (331)
Q Consensus 169 ~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~ 248 (331)
.+.+||+||++.++.|+.|+...+ +.+.... .+|++|.|++||+|||..+| |.
T Consensus 153 -~~~~lT~DH~~~~~~e~~ri~~~~----g~v~~~~-~~r~~g~l~~sRalGd~~~~---------------------~~ 205 (316)
T 3kdj_B 153 -TALPLSVDHKPDREDEAARIEAAG----GKVIQWN-GARVFGVLAMSRSIGDRYLK---------------------PS 205 (316)
T ss_dssp -EEEESCCCCCTTSHHHHHHHHHTT----CCEEESS-SEEETTTBSCSBCEECGGGT---------------------TT
T ss_pred -EecccCCCCCCCCHHHHHHHHHcC----CeEEecC-CceEcceeccccccCccccC---------------------CC
Confidence 799999999999999999999873 3333322 25999999999999998775 45
Q ss_pred eeeeeeEEEEEcCCCCeEEEEEeCCCcCccCHHHHHHHHhc-----------------------------CccchHHHHH
Q 020117 249 MTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSR-----------------------------NPRSVRPQLK 299 (331)
Q Consensus 249 v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls~~ei~~iv~~-----------------------------~~~~~a~~L~ 299 (331)
++++|++..+.+.+.+.|||||||||||+|+++|++++++. .++.+|+.|+
T Consensus 206 ~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv 285 (316)
T 3kdj_B 206 IIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLS 285 (316)
T ss_dssp SBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHH
T ss_pred cCCCCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHH
Confidence 78899999998555555899999999999999999999975 2567899999
Q ss_pred HHhcCCCCcccCCceEEEEe
Q 020117 300 TYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 300 ~~a~~~~~~~~dn~s~ivv~ 319 (331)
+.|+.+++. ||+|+|||+
T Consensus 286 ~~A~~~g~~--DNiTvivv~ 303 (316)
T 3kdj_B 286 KLAIQRGSK--DNISVVVVD 303 (316)
T ss_dssp HHHHHTTCC--SCEEEEEEE
T ss_pred HHHHHcCCC--CCeEEEEEE
Confidence 999999998 999999986
No 8
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-45 Score=351.53 Aligned_cols=240 Identities=18% Similarity=0.273 Sum_probs=197.1
Q ss_pred cceeeecc-ccccccce-----EEe----cCCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHH
Q 020117 38 YSIAVVQA-NSMLEDQG-----QVF----TSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFD 107 (331)
Q Consensus 38 ~~~~~~~~-r~~~ED~~-----~~~----~~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~ 107 (331)
|..+..+| |+.|||++ .+. ..++..||||||||||+.+|+++++++.+.|.+.. ..+.++|+++|.
T Consensus 15 ~~~~s~~G~R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~----~~~~~al~~af~ 90 (377)
T 3d8k_A 15 CASATSRNRRPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR----DVNEEEITRQFE 90 (377)
T ss_dssp HHHTTTCEEEEEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS----SSSHHHHHHHHH
T ss_pred EEEEEccCCCCccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc----ccHHHHHHHHHH
Confidence 44445555 67776554 442 25678999999999999999999999999996543 235789999999
Q ss_pred HHHHHHHHHHHhhcccCCCccCcCceEEEEEEE-----------------------------------------------
Q 020117 108 ATEEEFLHLVKRSWSARPQIASVGSCCLVGVIA----------------------------------------------- 140 (331)
Q Consensus 108 ~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~----------------------------------------------- 140 (331)
++++++.+.. ..+|||++++++.
T Consensus 91 ~~d~~l~~~~----------~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~ 160 (377)
T 3d8k_A 91 RMDGDLRAAN----------LPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPR 160 (377)
T ss_dssp HHHHHHHHHT----------CCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGG
T ss_pred HHHHHHHhcc----------cCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeecccccc
Confidence 9999998742 2479999888774
Q ss_pred ----CCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEEeeCCeeeecCccccc
Q 020117 141 ----KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVS 216 (331)
Q Consensus 141 ----~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~lt 216 (331)
++++|+|||||||+|++|++ .+.+||+||++.++.|+.||.+.+ +.+....+.+|++|.|++|
T Consensus 161 ~~~~~~~l~vanvGDSRa~l~r~g---------~~~~LT~DH~~~~~~E~~RI~~~g----g~v~~~~g~~rv~G~l~vt 227 (377)
T 3d8k_A 161 AAKGIYTIHVASLGNSRCVLKSGR---------TAIHLSTPHTASSHKERHRVQAAG----GVFTTVNGELLLGGVVPMT 227 (377)
T ss_dssp GTTCEEEEEEEEESSCEEEEEETT---------EEEESSCCCSSSSHHHHHHHHTTT----CCEEECSSSEEETTTBSCS
T ss_pred cccCCCeEEEEEcccceEEEEECC---------EEEECCcCCCCCCHHHHHHHHHcC----CEEEecCCcEEEcCceecc
Confidence 14899999999999999987 799999999999999999999873 4444345678999999999
Q ss_pred ccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccCHHHHHHHHhc-------
Q 020117 217 RSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSR------- 289 (331)
Q Consensus 217 RalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls~~ei~~iv~~------- 289 (331)
|||||..+|... ..|+++|+|+++|++..++|+++| |||||||||||+|+++|+++.+..
T Consensus 228 RalGd~~~k~~~------------~~~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~ls~~e~v~~v~~~~~~~~~ 294 (377)
T 3d8k_A 228 RAFGSFDFKKGG------------QGKLQQDLVSAVPDVTTFFAYPGD-DIVAGTAGAFAHFRSHAAIAAAIALYPVSPE 294 (377)
T ss_dssp BCSSCGGGSCC---------------CCSSCSSBCCCEEEEEEECTTC-EEEEECGGGGCSCSSHHHHHHHHTTSCCCGG
T ss_pred eeecChhhhccc------------ccccccCccccCCcEEEEEcCCCC-EEEEEECCcccCCCcHHHHHHHHHHhhccCC
Confidence 999999888643 235567889999999999999999 788999999999999998875432
Q ss_pred CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 290 NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 290 ~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
.++++|+.|++.|+.+++. ||+|+|||.
T Consensus 295 ~~~~~a~~Lv~~A~~~g~~--DNiTvivv~ 322 (377)
T 3d8k_A 295 TVLDAAKAMVVNAKRRKVT--KNISTFVRH 322 (377)
T ss_dssp GHHHHHHHHHHTTTTSSCC--SCCCEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCC--CCEEEEEEE
Confidence 4678999999999999998 999999986
No 9
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=5.1e-47 Score=364.68 Aligned_cols=280 Identities=22% Similarity=0.262 Sum_probs=216.8
Q ss_pred cceeecccCCCccCccceeeecc-cc--------ccccceEEec-CCCceEEEEecCCChhHHHHHHHHHHHHHHHhh-h
Q 020117 23 GLLWHMDLKSHASGDYSIAVVQA-NS--------MLEDQGQVFT-SPSATYVGVYDGHGGPEASRFITRHLFPFLHKF-T 91 (331)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~-r~--------~~ED~~~~~~-~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~-~ 91 (331)
...|.++++.+....+..+.++| |. .|||++.++. .++..||||||||||+.+|++++++|+..|.+. .
T Consensus 14 ~~~~~~~~~~~~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~ 93 (401)
T 2j4o_A 14 QPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQL 93 (401)
T ss_dssp --CCTTTSCBCTTEEEEEECCEEECSSSSCEECCCCCEEEEEEEETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSC
T ss_pred CCCccccccccccCceeEEecccccccccccCCCCCCceEEEecCCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 48999999999988888888887 33 4999998774 567899999999999999999999999887542 1
Q ss_pred hh--cCCCcHHHHHHHHHHHHHHHHHHHHhhcc-----------c---------C----------CCccCcCceEEEEEE
Q 020117 92 TE--QGGLSAEVIKKAFDATEEEFLHLVKRSWS-----------A---------R----------PQIASVGSCCLVGVI 139 (331)
Q Consensus 92 ~~--~~~~~~~~l~~a~~~~~~~l~~~~~~~~~-----------~---------~----------~~~~~~GtT~~~~~i 139 (331)
.. ......++|+++|..+++.+.+...+... . . .....+|||++++++
T Consensus 94 ~~~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li 173 (401)
T 2j4o_A 94 NAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVL 173 (401)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEE
T ss_pred hcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEE
Confidence 11 11224678999999999988775321110 0 0 012358999999999
Q ss_pred ECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEEeeCCeeeecCcccccccc
Q 020117 140 AKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSI 219 (331)
Q Consensus 140 ~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~ltRal 219 (331)
.++++|+|||||||+|++|.+.++ +.+++||.||++.++.|++||...++. +... ...|++|.|++||||
T Consensus 174 ~~~~l~vanvGDSRa~l~r~~~~g-----~~~~~LT~DH~~~~~~E~~Ri~~~Gg~----v~~~-~~~r~~g~l~vtRal 243 (401)
T 2j4o_A 174 LNNKLYVANVGTNRALLCKSTVDG-----LQVTQLNVDHTTENEDELFRLSQLGLD----AGKI-KQVGIICGQESTRRI 243 (401)
T ss_dssp ETTEEEEEEESSCEEEEEEECSSS-----EEEEECSCCCSTTSHHHHHHHHTTTCC----HHHH-HHHCCBTTBCCSBCE
T ss_pred ECCEEEEEEccCceEEEEEcCCCC-----ceEEECCCCCCCCCHHHHHHHHHcCCC----eeec-cCccccCCccccccc
Confidence 999999999999999999987332 369999999999999999999988532 1100 013788889999999
Q ss_pred cccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEE-EEcCCCCeEEEEEeCCCcCcc--------CHHHHHHHHhc-
Q 020117 220 GDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILI-RKLKSNDLFLIFASDGLWEQL--------SDEAAVEIVSR- 289 (331)
Q Consensus 220 Gd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~-~~L~~~d~fLVL~SDGlwd~l--------s~~ei~~iv~~- 289 (331)
||..+|.+.-..+ . ..+.++++|+++|++.. ++|+++|.|||||||||||+| +++||+++|.+
T Consensus 244 Gd~~~k~~~~~~~-~------~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~ 316 (401)
T 2j4o_A 244 GDYKVKYGYTDID-L------LSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTE 316 (401)
T ss_dssp ECHHHHHSGGGST-T------TTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CCHhhcccccccc-c------ccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHH
Confidence 9988875321000 0 11234577999999996 999999999999999999999 89999999975
Q ss_pred -----CccchHHHHHHHhcC-------CCCc------ccCCceEEEEe
Q 020117 290 -----NPRSVRPQLKTYAVY-------PSQV------WDRPMSFILHA 319 (331)
Q Consensus 290 -----~~~~~a~~L~~~a~~-------~~~~------~~dn~s~ivv~ 319 (331)
.++.+|+.|++.|+. +++. ..||+|+|||.
T Consensus 317 l~~~~~~~~~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~ 364 (401)
T 2j4o_A 317 FAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRN 364 (401)
T ss_dssp HHHCSSHHHHHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEE
T ss_pred HhcCCCHHHHHHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEE
Confidence 578899999999875 5542 25999999997
No 10
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-46 Score=356.94 Aligned_cols=275 Identities=19% Similarity=0.227 Sum_probs=207.0
Q ss_pred eeecccCCCccCccc------eeeecccc---ccccceEEec-CCCceEEEEecCCChhHHHHHHHHHHHHHHHh-hhhh
Q 020117 25 LWHMDLKSHASGDYS------IAVVQANS---MLEDQGQVFT-SPSATYVGVYDGHGGPEASRFITRHLFPFLHK-FTTE 93 (331)
Q Consensus 25 ~~~~~~~~~~~~~~~------~~~~~~r~---~~ED~~~~~~-~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~-~~~~ 93 (331)
.|.++++.+...... .+..+.|+ .|||++.+.. +++..||||||||||+.+|+++++++++.|.+ ....
T Consensus 4 ~~~~~~~~~~~~~~g~~~~~~~~~~G~r~~~~~nED~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~ 83 (358)
T 2irm_A 4 SWTDDLKVCNQTGVGEAINQIYKDDGRRCEGYESRDKKCLCISDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNV 83 (358)
T ss_dssp CCGGGSCBCTTEEEEEECCEEECSSSCEEECSSCCEEEEEEECSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTT
T ss_pred CcccccccCCCCCCcccccceeecCCCCCCCCCCCceEEEEECCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhcc
Confidence 588888888732222 23333344 4999998774 46789999999999999999999999998865 2111
Q ss_pred --cCCCcHHHHHHHHHHHHHHHHHHHHhhc----------c-----------cC----------CCccCcCceEEEEEEE
Q 020117 94 --QGGLSAEVIKKAFDATEEEFLHLVKRSW----------S-----------AR----------PQIASVGSCCLVGVIA 140 (331)
Q Consensus 94 --~~~~~~~~l~~a~~~~~~~l~~~~~~~~----------~-----------~~----------~~~~~~GtT~~~~~i~ 140 (331)
....+.++|+++|..+++++.+...+.. + .. .....+|||++++++.
T Consensus 84 ~~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~ 163 (358)
T 2irm_A 84 CNTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIH 163 (358)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEE
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEE
Confidence 1112467899999999999876432100 0 00 0233589999999999
Q ss_pred CCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEEeeCCeeeecCccccccccc
Q 020117 141 KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIG 220 (331)
Q Consensus 141 ~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~ltRalG 220 (331)
++++|+|||||||+|++|....+ .+.+++||+||++.++.|++||.+.++ .+.. .|+.|.+ +|||||
T Consensus 164 ~~~l~vAnvGDSRa~l~r~~~~g----~~~~~~LT~DH~~~~~~E~~Ri~~~Gg----~v~~----~r~~g~l-lTRalG 230 (358)
T 2irm_A 164 RSHLYLGNIGNCRALLCKTDEHD----TLTVTQLSVDHNLLNAEEAARLFRLGL----MAQN----FEGVPLY-STRCIG 230 (358)
T ss_dssp SSEEEEEEESSCEEEEEECCTTC----SCEEEECSCCCBTTSHHHHHHHHTTTC----CGGG----GTTCTTC-BSBCEE
T ss_pred CCEEEEEEcccCeEEEEEecCCC----ceeeEeCCCCCCCCCHHHHHHHHHcCC----eEec----cCcCCEE-cccCCc
Confidence 99999999999999999983111 456999999999999999999998843 2211 3778877 999999
Q ss_pred ccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEE-EEcCCCCeEEEEEeCCCcCccC----------HHHHHHHHhc
Q 020117 221 DVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILI-RKLKSNDLFLIFASDGLWEQLS----------DEAAVEIVSR 289 (331)
Q Consensus 221 d~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~-~~L~~~d~fLVL~SDGlwd~ls----------~~ei~~iv~~ 289 (331)
|..+|... ...+ ...|.+++.|+++|++.. ++|+++|.|||||||||||+|+ ++||++++.+
T Consensus 231 d~~~K~~~-~~~~------~~~~~~~~~v~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~ 303 (358)
T 2irm_A 231 NYLGKAGY-KDCN------FLSSATAEPVIFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISE 303 (358)
T ss_dssp CHHHHTTG-GGSS------SSTTCSSCSSBCCCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHH
T ss_pred CHHHhccc-cccc------cccccCCCCEeccCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHH
Confidence 98876421 0000 011335578999999995 9999999999999999999999 9999999974
Q ss_pred ------CccchHHHHHHHhcC---------------CCCcccCCceEEEEe
Q 020117 290 ------NPRSVRPQLKTYAVY---------------PSQVWDRPMSFILHA 319 (331)
Q Consensus 290 ------~~~~~a~~L~~~a~~---------------~~~~~~dn~s~ivv~ 319 (331)
.++++|+.|++.|+. +++...||+|+|||.
T Consensus 304 ~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~Gg~~~DNiTvivv~ 354 (358)
T 2irm_A 304 EFQNQSTLGGVAQSVVHRIVQAHHDTYMQLVEEHRSVTFNSRDDVTLLIRN 354 (358)
T ss_dssp HTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCEECCEEEEEEE
T ss_pred HHhcCCCHHHHHHHHHHHHHHhhhhhhccccccccccCCCCCCCeEEEEEe
Confidence 578899999999965 341134999999987
No 11
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=5.3e-45 Score=341.48 Aligned_cols=256 Identities=22% Similarity=0.317 Sum_probs=198.7
Q ss_pred ccceeeecc-ccccccceEEec-----CCCceEEEEecCCChhHHHHHHHHHHHHHHHhh--hhh---------------
Q 020117 37 DYSIAVVQA-NSMLEDQGQVFT-----SPSATYVGVYDGHGGPEASRFITRHLFPFLHKF--TTE--------------- 93 (331)
Q Consensus 37 ~~~~~~~~~-r~~~ED~~~~~~-----~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~--~~~--------------- 93 (331)
.|+....+| |+.|||++.+.. .++..+|+|||||||+.+|+++++.+.+.|.+. ...
T Consensus 23 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~ 102 (324)
T 2i44_A 23 DAAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPATEVD 102 (324)
T ss_dssp EEEEEEECTTSSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCHHHHH
T ss_pred EEEEEECCCCCCccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCccccc
Confidence 355555555 789999998874 346789999999999999999999999988763 110
Q ss_pred --cCCCcHHHHHHHHHHHHHHHHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeee
Q 020117 94 --QGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVA 171 (331)
Q Consensus 94 --~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~ 171 (331)
....+.++|+++|..+++++.+...+. ......+|||+ +++.++++|+|||||||+|+++.+..+ +.+
T Consensus 103 ~~~~~~~~~~l~~a~~~~~~~i~~~~~~~---~~~~~g~gtt~--~~i~~~~l~vanvGDSRa~l~r~~~~g-----~~~ 172 (324)
T 2i44_A 103 EKLPQLLDQAVDDMYKNADNELVKMCEQL---NKDYASSTSVT--AVLAKGFVAVGHLGDSRIAMGVETPNG-----LNC 172 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCSSCEECEEE--EEEETTEEEEEEESSCEEEEEEEETTE-----EEE
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhhc---CCCCCCCCeEE--EEEECCeEEEEEccCceEEEEeccCCC-----ceE
Confidence 011236789999999999998876432 12223344444 448999999999999999999974111 258
Q ss_pred ecccCCCCCCCHHHHHHHHhhCCCCCceEEee----CCeeeecCcccccccccc----cccccCCCcCCcCCcccccCCC
Q 020117 172 ERLSVDHNVGVEEVRKEVEALHPDDSHIVVFS----RGVWRIKGIIQVSRSIGD----VYLKKPEFSRDHGFHHFRLPIP 243 (331)
Q Consensus 172 ~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~----~~~~rv~G~l~ltRalGd----~~~k~~~~~~~~~~~~~~~~~~ 243 (331)
.+||+||++.++.|++||.+.+ +.+... .+.++..|.|++|||+|| ..+|+. ++ ..+
T Consensus 173 ~~LT~DH~~~~~~E~~Ri~~~G----g~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~----------~g-~~~ 237 (324)
T 2i44_A 173 EFLTVDHKPDMPHEKLRIMRNG----GSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRA----------FG-GKD 237 (324)
T ss_dssp EESCCCCCTTSHHHHHHHHHTT----CEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBC----------EE-CGG
T ss_pred EECCCCCCCcCHHHHHHHHHcC----CEEEecccccCCCccccCcccchhhcCCccccceeccc----------cC-Ccc
Confidence 9999999999999999999883 444211 123467899999999999 444321 11 112
Q ss_pred CCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccCHHHHHHHHhc------Cccc--hHHHHHHHhcCCCCcccCCceE
Q 020117 244 LKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSR------NPRS--VRPQLKTYAVYPSQVWDRPMSF 315 (331)
Q Consensus 244 ~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls~~ei~~iv~~------~~~~--~a~~L~~~a~~~~~~~~dn~s~ 315 (331)
.++|+|+++|++..++|+++|.|||||||||||+|+++|+++++.+ .+++ +|+.|++.|+.+++. ||+|+
T Consensus 238 ~~~~~v~~~pdv~~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~~~g~~--DNiTv 315 (324)
T 2i44_A 238 LKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQSA--DNITA 315 (324)
T ss_dssp GTTTTCBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCCC--CCEEE
T ss_pred ccCCeEeecCEEEEEEcCCCCeEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCC--CCCEE
Confidence 3567899999999999999988999999999999999999999974 5777 999999999999998 99999
Q ss_pred EEEe
Q 020117 316 ILHA 319 (331)
Q Consensus 316 ivv~ 319 (331)
|||.
T Consensus 316 ivv~ 319 (324)
T 2i44_A 316 MTVF 319 (324)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
No 12
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=6.5e-45 Score=345.70 Aligned_cols=243 Identities=24% Similarity=0.292 Sum_probs=198.7
Q ss_pred ccceeeecc-ccccccceEEec----CCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHH
Q 020117 37 DYSIAVVQA-NSMLEDQGQVFT----SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEE 111 (331)
Q Consensus 37 ~~~~~~~~~-r~~~ED~~~~~~----~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~ 111 (331)
.|..+.++| |..|||++.+.. .++..||||||||||+.||++++++|+..+.+.. ....+.|+++|..+++
T Consensus 14 ~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~----~~~~~~l~~a~~~~d~ 89 (364)
T 2isn_A 14 TTVAATMLGRRPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLS----EFTFAEVKKACLSLDA 89 (364)
T ss_dssp EEEEEEECTTSSSCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCS----SCCHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCcCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhh----cccHHHHHHHHHHHHH
Confidence 355566666 779999998764 5678999999999999999999999999886532 3357889999999999
Q ss_pred HHHHHHHhhcccCCCccCcCceEEEEEEEC--------------------------------------------------
Q 020117 112 EFLHLVKRSWSARPQIASVGSCCLVGVIAK-------------------------------------------------- 141 (331)
Q Consensus 112 ~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~-------------------------------------------------- 141 (331)
++.+.... ...+|||++++++.+
T Consensus 90 ~i~~~~~~-------~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (364)
T 2isn_A 90 EIIRKLGP-------KHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPD 162 (364)
T ss_dssp HHHHHHCS-------SSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCCCC
T ss_pred HHHHhccc-------CCCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhccccccccccccccc
Confidence 99775421 145899999988752
Q ss_pred ----------CEEEEEEcCCceEEEe-eeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEEeeCCeeeec
Q 020117 142 ----------DVLYVANLGDSRAVLG-RRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIK 210 (331)
Q Consensus 142 ----------~~l~vanvGDSR~~l~-r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~ 210 (331)
.++|+|||||||+|++ +++ .+.+||+||++.++.|+.||...+ +.+.. .+.+|++
T Consensus 163 ~~~~~~~~g~~~l~vanvGDSRayl~~r~g---------~~~~LT~DH~~~~~~e~~rI~~~g----G~v~~-~~~~rv~ 228 (364)
T 2isn_A 163 VQQKTIPAGSFLVTAINIGDSRATLIHSDG---------GLTRLSKDHKPNHPTEASRIEKAG----GSVET-FDVPRVD 228 (364)
T ss_dssp CEEEEECTTCEEEEEEEESSCEEEEECTTS---------CEEECCCCCCTTSHHHHHHHHHTT----CCEEE-SSSEEET
T ss_pred ccccccccCccEEEEEECccCEEEEEeeCC---------EEEEcCcCCCCCCHHHHHHHHHcC----CeEec-CCCcccC
Confidence 3899999999999999 455 599999999999999999998873 43433 3557999
Q ss_pred CcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccC--HHHHHHHHh
Q 020117 211 GIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLS--DEAAVEIVS 288 (331)
Q Consensus 211 G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls--~~ei~~iv~ 288 (331)
|.|++||||||..+|... ..+..++.|+++|++..++++++| |||||||||||+++ ++++.+++.
T Consensus 229 g~l~ltRalGd~~~k~~~------------~l~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~l~~~~~~v~~~~~ 295 (364)
T 2isn_A 229 GVLALSRAFGDSDFKMNP------------NLPPEEQKVIAVPDVRQFYALSSD-LLLLACDGVYEPSGMDWAYVRDLTV 295 (364)
T ss_dssp TTBSCSBCEECGGGSCCC------------SSCGGGSSSBCCCEEEEEEECTTC-EEEEECHHHHCSSSCCHHHHHHHHH
T ss_pred CceeeEEEecchhhcccc------------ccCcccCceEEEeEEEEEECCCCC-EEEEEcCCCCCCCCCCHHHHHHHHH
Confidence 999999999999887421 122344678999999999999999 89999999999976 888887763
Q ss_pred -------cCccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 289 -------RNPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 289 -------~~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
..++++|+.|++.|+.+++. ||+|+|||.
T Consensus 296 ~~~~~~~~~~~~~a~~Lv~~A~~~g~~--DNiTvivv~ 331 (364)
T 2isn_A 296 AEMQRSKGDLEEVAARVMDYAYDMNSQ--DNISVMLVA 331 (364)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHTTCC--SCEEEEEEE
T ss_pred HHHhhcCCCHHHHHHHHHHHHHhcCCC--CCEEEEEEE
Confidence 25788999999999999988 999999997
No 13
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=1.7e-44 Score=345.99 Aligned_cols=256 Identities=23% Similarity=0.346 Sum_probs=208.6
Q ss_pred eecccCCCccCccceeeecc-ccccccceEEec-CCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHH
Q 020117 26 WHMDLKSHASGDYSIAVVQA-NSMLEDQGQVFT-SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIK 103 (331)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~-r~~~ED~~~~~~-~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~ 103 (331)
|....+..+-..+.....+| |..|||++.+.. .++..+|+|||||||+.+++++++.+.+.+.+.... .....++|+
T Consensus 112 ~g~p~p~~~~~~~g~~s~~G~R~~NED~~~~~~~~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~-~~~~~~~l~ 190 (389)
T 4da1_A 112 AGKPIPKISLENVGCASQIGKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK-EKNLETLLT 190 (389)
T ss_dssp -------CCGGGCEEEEECTTSSSCCEEEEEEECSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT-CCCHHHHHH
T ss_pred EcCcCCcccceeEEEecCCCCCCCCcceeeeeecCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhcc-ccCHHHHHH
Confidence 34444554445566666666 889999998764 577899999999999999999999999999876544 345678999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCccCcCceEEEEEEECC-EEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCC
Q 020117 104 KAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKD-VLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGV 182 (331)
Q Consensus 104 ~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~-~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~ 182 (331)
++|..+++.+.+..... .......+|||++++++.++ ++|+|||||||+|++|++ .+.+||+||++.+
T Consensus 191 ~a~~~~n~~i~~~~~~~--~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g---------~~~~LT~DHs~~~ 259 (389)
T 4da1_A 191 LAFLEIDKAFSSHARLS--ADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------KPMKLTIDHTPER 259 (389)
T ss_dssp HHHHHHHHHHHHHHHHS--SCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETT---------EEEECCCCCCTTS
T ss_pred HHHHHHHHHHHHHhhhc--cccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECC---------EeEEeCCCCCCCC
Confidence 99999999998866432 12234558999999999866 999999999999999987 7999999999999
Q ss_pred HHHHHHHHhhCCCCCceEEe-eCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcC
Q 020117 183 EEVRKEVEALHPDDSHIVVF-SRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLK 261 (331)
Q Consensus 183 ~~e~~ri~~~~~~~~~~~~~-~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~ 261 (331)
+.|++|+...+ +.+.. ..+.+|++|.+.+|||||+..+|.++ ++++|++..+.+.
T Consensus 260 ~~E~~Ri~~~g----G~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~--------------------v~~~pdi~~~~l~ 315 (389)
T 4da1_A 260 KDEKERIKKCG----GFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG--------------------VIAEPETKRIKLH 315 (389)
T ss_dssp HHHHHHHHHHT----CCEECC---CCEETTTBSCSBCEECGGGGGGT--------------------CBCCCEEEEEECC
T ss_pred HHHHHHHHHcC----CeEecccCCCccCCCeEeeEeeeCChhhccCC--------------------CCCCCceEEEEEc
Confidence 99999999884 33332 22345899999999999998887533 7789999999999
Q ss_pred CC-CeEEEEEeCCCcCccCHHHHHHHHhc--CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 262 SN-DLFLIFASDGLWEQLSDEAAVEIVSR--NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 262 ~~-d~fLVL~SDGlwd~ls~~ei~~iv~~--~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
++ |.|||||||||||+|+++|+++++.. .++++|+.|++.|+.+++. ||+|+|||.
T Consensus 316 ~~~dd~llL~SDGL~d~l~~~ei~~il~~~~~~~~~a~~Lv~~A~~~g~~--DNiTvivv~ 374 (389)
T 4da1_A 316 HADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTE--DNSTAVVVP 374 (389)
T ss_dssp SSSCEEEEEECHHHHTTCCHHHHHHHHHHSSSHHHHHHHHHHHHHHHTCC--SCEEEEEEE
T ss_pred CCCCcEEEEEeCCcccCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHcCCC--CCeEEEEEE
Confidence 75 67999999999999999999999986 5889999999999999988 999999986
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=7.7e-39 Score=288.57 Aligned_cols=229 Identities=19% Similarity=0.209 Sum_probs=180.6
Q ss_pred ccceeeecc--ccccccceEEecCC-CceEEEEecCCChhHHHHHHHHHHHHHHH-hhhhhc---CCCcHHHHHHHHHHH
Q 020117 37 DYSIAVVQA--NSMLEDQGQVFTSP-SATYVGVYDGHGGPEASRFITRHLFPFLH-KFTTEQ---GGLSAEVIKKAFDAT 109 (331)
Q Consensus 37 ~~~~~~~~~--r~~~ED~~~~~~~~-~~~l~~V~DGhGG~~as~~a~~~l~~~l~-~~~~~~---~~~~~~~l~~a~~~~ 109 (331)
.|.....+| |..|||++.+...+ +..+|+|||||||+.+++++++.+.+.+. ++.... ...+.+.|+++|..+
T Consensus 7 ~~~~~s~~G~~r~~neD~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~ 86 (250)
T 2pk0_A 7 EISLLTDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWMLVSIETE 86 (250)
T ss_dssp EEEEEEECCTTCSCCCEEEEEEECTTCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCcCCCceEeccCCCCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHH
Confidence 455555555 68999999877654 78999999999999999999998888887 443221 112456789999999
Q ss_pred HHHHHHHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHH
Q 020117 110 EEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEV 189 (331)
Q Consensus 110 ~~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri 189 (331)
++.+.+..... . ...+|||++++++.+++++++|+||||+|++|++ .+++||.||++.++.++.
T Consensus 87 ~~~l~~~~~~~----~-~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g---------~~~~lt~dh~~~~~~~~~-- 150 (250)
T 2pk0_A 87 NRKIYELGQSD----D-YKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQG---------EYHLLTSDHSLVNELVKA-- 150 (250)
T ss_dssp HHHHHHHHHHT----T-CTTCEECEEEEEEETTEEEEEEESSCEEEEEETT---------EEEECCCCCBHHHHHHHT--
T ss_pred HHHHHHHHhhC----C-CCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCC---------cEEEeCCCCCHHHHHHHc--
Confidence 99998765421 2 3458999999999999999999999999999987 699999999997654431
Q ss_pred HhhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEE
Q 020117 190 EALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIF 269 (331)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL 269 (331)
|.+... +....++.+.+||+||+... ++|++..++|+++| +|||
T Consensus 151 -------g~i~~~--~~~~~~~~~~ltralG~~~~--------------------------~~p~~~~~~l~~gd-~lll 194 (250)
T 2pk0_A 151 -------GQLTEE--EAASHPQKNIITQSIGQANP--------------------------VEPDLGVHLLEEGD-YLVV 194 (250)
T ss_dssp -------TSSCHH--HHHTCCSCCCBSCCBSCSSC--------------------------CCCEEEEEECCTTC-EEEE
T ss_pred -------CCCCHH--HHHhCCCcceEEeecCCCCC--------------------------ccceEEEEEcCCCC-EEEE
Confidence 111000 00012344579999998532 48999999999999 6889
Q ss_pred EeCCCcCccCHHHHHHHHhc--CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 270 ASDGLWEQLSDEAAVEIVSR--NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 270 ~SDGlwd~ls~~ei~~iv~~--~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
|||||||+++++|+.+++.+ .++++++.|++.|+.+++. ||+|+|++.
T Consensus 195 ~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~L~~~a~~~g~~--DniTvivv~ 244 (250)
T 2pk0_A 195 NSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHRGGL--DNITVALVY 244 (250)
T ss_dssp ECHHHHTTSCHHHHHHHHTSSSCHHHHHHHHHHHHHHTTCC--SCEEEEEEE
T ss_pred ECCCCCCCcCHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC--CCeEEEEEE
Confidence 99999999999999999987 5888999999999988887 999999986
No 15
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=8.7e-39 Score=285.99 Aligned_cols=224 Identities=19% Similarity=0.246 Sum_probs=175.7
Q ss_pred cceeeecc--ccccccceEEecCCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhh-cCCCcHHHHHHHHHHHHHHHH
Q 020117 38 YSIAVVQA--NSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTE-QGGLSAEVIKKAFDATEEEFL 114 (331)
Q Consensus 38 ~~~~~~~~--r~~~ED~~~~~~~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~-~~~~~~~~l~~a~~~~~~~l~ 114 (331)
|.....+| |+.|||++.+ +..+|+|||||||+.+++++++.+.+.+.+.... ....+.+.|+++|..+++.+.
T Consensus 7 ~~~~s~~G~~r~~nED~~~~----~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~l~~a~~~~~~~i~ 82 (237)
T 1txo_A 7 YAARSDRGLVRANNEDSVYA----GARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAKLDAAVRAGNSAIA 82 (237)
T ss_dssp EEEEEECCSSCSSCCEEEEE----CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCcCCCcccc----CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHH
Confidence 44445555 7899999865 4579999999999999999999999999875542 223467889999999999998
Q ss_pred HHHHhhcccCCCccCcCceEEEEEEECCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCC
Q 020117 115 HLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHP 194 (331)
Q Consensus 115 ~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~ 194 (331)
+.... .+....+|||++++++.+++++++|+||||+|++|++ .+.+||.||++.++.+. .+
T Consensus 83 ~~~~~----~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g---------~~~~lt~dh~~~~~~~~-----~G- 143 (237)
T 1txo_A 83 AQVEM----EPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDG---------ELTQITKDDTFVQTLVD-----EG- 143 (237)
T ss_dssp HHHHH----CGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETT---------EEEECSCCCBHHHHHHH-----TT-
T ss_pred HHHhh----CCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCC---------EeEEeCCCCCHHHHHHH-----cC-
Confidence 76543 2223457999999999999999999999999999987 69999999998654322 11
Q ss_pred CCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCC
Q 020117 195 DDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGL 274 (331)
Q Consensus 195 ~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGl 274 (331)
.+. ......+ +....+||++|+. .++|++..++++++|. ||||||||
T Consensus 144 ---~i~-~~~~~~~-~~~~~~tr~lg~~---------------------------~~~p~~~~~~l~~~d~-lvl~SDGl 190 (237)
T 1txo_A 144 ---RIT-PEEAHSH-PQRSLIMRALTGH---------------------------EVEPTLTMREARAGDR-YLLCSDGL 190 (237)
T ss_dssp ---SSC-TTGGGGC-TTTTCBCCCBSSS---------------------------CCCCEEEEEECCTTCE-EEEECHHH
T ss_pred ---CCC-HHHHhhC-ccccceeeccCCC---------------------------CccceEEEEecCCCCE-EEEECCCC
Confidence 100 0000001 1112489999863 1489999999999995 57999999
Q ss_pred cCccCHHHHHHHHhc-CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 275 WEQLSDEAAVEIVSR-NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 275 wd~ls~~ei~~iv~~-~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
||+++++|+.+++.+ .++++|+.|++.|+.+++. ||+|+|++.
T Consensus 191 ~d~l~~~~i~~~~~~~~~~~~a~~L~~~a~~~g~~--DniTvivv~ 234 (237)
T 1txo_A 191 SDPVSDETILEALQIPEVAESAHRLIELALRGGGP--DNVTVVVAD 234 (237)
T ss_dssp HTTSCHHHHHHHHTSSSHHHHHHHHHHHHHHTTCC--SCEEEEEEE
T ss_pred CCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHcCCC--CCeEEEEEE
Confidence 999999999999987 6889999999999999888 999999986
No 16
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=3e-38 Score=282.84 Aligned_cols=227 Identities=18% Similarity=0.205 Sum_probs=168.5
Q ss_pred cceeeecc--ccccccceEEecCC-CceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhc----CCCcHHHHHHHHHHHH
Q 020117 38 YSIAVVQA--NSMLEDQGQVFTSP-SATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQ----GGLSAEVIKKAFDATE 110 (331)
Q Consensus 38 ~~~~~~~~--r~~~ED~~~~~~~~-~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~----~~~~~~~l~~a~~~~~ 110 (331)
|.....+| |+.|||++ +...+ .. +|+|||||||+.+++++++.+.+.+.+..... ...+.+.|+++|..++
T Consensus 3 ~~~~s~~G~~r~~neD~~-~~~~~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~ 80 (240)
T 2j82_A 3 VAGLTDCGLIRKSNQDAF-YIDEKHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLAAN 80 (240)
T ss_dssp EEEEEECCSSCSSCCEEE-EECTTTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCCcCCCcc-EecCCCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHH
Confidence 44444444 78999999 66543 44 99999999999777777776666665433221 3456788999999999
Q ss_pred HHHHHHHHhhcccCCCccCcCceEEEEEEE--CCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHH
Q 020117 111 EEFLHLVKRSWSARPQIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKE 188 (331)
Q Consensus 111 ~~l~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~r 188 (331)
+.+.+... ..+....+|||++++++. +++++++|+||||+|++|++ .+.+||.||++.++.++.
T Consensus 81 ~~l~~~~~----~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~---------~~~~lt~dh~~~~~~~~~- 146 (240)
T 2j82_A 81 HAIVEQQR----QNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKD---------QLQQITSDHTWIAQAVQL- 146 (240)
T ss_dssp HHHHHHHT----TSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETT---------EEEECSCCCBHHHHC----
T ss_pred HHHHHHhh----cccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCC---------EEEEECCCCcHHHHHHHc-
Confidence 99987652 222345579999999999 99999999999999999987 699999999996543322
Q ss_pred HHhhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEE
Q 020117 189 VEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLI 268 (331)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLV 268 (331)
+.+... +..+.++.+.+||+||+... ++|++..++++++| +||
T Consensus 147 --------g~i~~~--~~~~~~~~~~ltralG~~~~--------------------------~~p~~~~~~l~~gd-~ll 189 (240)
T 2j82_A 147 --------GSLTIE--QARQHPWRHVLSQCLGREDL--------------------------SQIDIQPIDLEPGD-RLL 189 (240)
T ss_dssp -----------------------CCCBSCCBSCTTC--------------------------CCCEEEEEECCTTC-EEE
T ss_pred --------CCCCHH--HHhcCCCcCeEeecCCCCCc--------------------------eeEEEEEEeeCCCC-EEE
Confidence 111111 11133455679999998431 48999999999999 588
Q ss_pred EEeCCCcCccCHHHHHHHHh-cCccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 269 FASDGLWEQLSDEAAVEIVS-RNPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 269 L~SDGlwd~ls~~ei~~iv~-~~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
||||||||+++++++.+++. ..++++++.|++.|+..++. ||+|+|++.
T Consensus 190 l~SDGl~d~l~~~~i~~~l~~~~~~~~a~~l~~~a~~~g~~--DniTvivv~ 239 (240)
T 2j82_A 190 LCSDGLTEELTDDVISIYLSEPNVQKAAAALVDAAKTHGGR--DNVTVVVIS 239 (240)
T ss_dssp EECHHHHTTSCHHHHHHHHTCSSHHHHHHHHHHHHHHTTCC--SCEEEEEEE
T ss_pred EECCCCCCCCCHHHHHHHHccCCHHHHHHHHHHHHHHcCCC--CCeEEEEEe
Confidence 99999999999999999996 45788999999999988887 999999986
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=3.6e-36 Score=268.46 Aligned_cols=217 Identities=19% Similarity=0.181 Sum_probs=169.3
Q ss_pred cceeeecc--ccccccceEEecCCCceEEEEecCCChh--HHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHH
Q 020117 38 YSIAVVQA--NSMLEDQGQVFTSPSATYVGVYDGHGGP--EASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEF 113 (331)
Q Consensus 38 ~~~~~~~~--r~~~ED~~~~~~~~~~~l~~V~DGhGG~--~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l 113 (331)
|.....+| |+.|||++++ +..+|+|||||||+ .||+++.+.+.+.+... .. .+.++++|..+++.+
T Consensus 8 ~~~~s~~G~~r~~neD~~~~----~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~----~~--~~~l~~~~~~~~~~l 77 (234)
T 2jfr_A 8 AATATDQGPVRENNQDACLA----DGILYAVADGFGARGHHASATALKTLSAGFAAA----PD--RDGLLEAVQQANLRV 77 (234)
T ss_dssp EEEEEECCSSCSSCCEEEEE----ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHS----CS--HHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCcCCCccee----CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcC----Cc--HHHHHHHHHHHHHHH
Confidence 44444555 7899999855 57899999999965 89999999888877543 11 778999999999999
Q ss_pred HHHHHhhcccCCCccCcCceEEEEEEECCE---EEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHH
Q 020117 114 LHLVKRSWSARPQIASVGSCCLVGVIAKDV---LYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVE 190 (331)
Q Consensus 114 ~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~---l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~ 190 (331)
.+.... .... +|||++++++.+++ ++++|+||||+|++|++ .+.+||.||++.++.++.
T Consensus 78 ~~~~~~----~~~~--~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g---------~~~~lt~dh~~~~~~~~~--- 139 (234)
T 2jfr_A 78 FELLGD----EPTV--SGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDG---------HMEQLTDDHSVAGELVRM--- 139 (234)
T ss_dssp HHHHTT----SSSC--CEECEEEEECCCGGGTSCEEEEESSCCEEEEETT---------EEEECSCCCBHHHHHHHT---
T ss_pred HHhhcc----CCCC--CCccEEEEEEECCCccEEEEEEEccCceEEEECC---------EEEEeCCCCCHHHHHHHc---
Confidence 876421 1112 89999999999888 99999999999999987 699999999997543321
Q ss_pred hhCCCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEE
Q 020117 191 ALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFA 270 (331)
Q Consensus 191 ~~~~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~ 270 (331)
+.+... +....++.+.+||+||+.. .++|++..++++++| +||||
T Consensus 140 ------g~i~~~--~~~~~~~~~~~tralG~~~--------------------------~~~~~~~~~~l~~gd-~lll~ 184 (234)
T 2jfr_A 140 ------GEITRH--EARWHPQRHLLTRALGIGP--------------------------HIGPDVFGIDCGPGD-RLLIS 184 (234)
T ss_dssp ------TSSCHH--HHTTCTTTTCBSCCBSSSS--------------------------CCCCEEEECCCCTTC-EEEEE
T ss_pred ------CCCCHH--HHhcCcccceeeecCcCCC--------------------------CceeEEEEEecCCCC-EEEEE
Confidence 110000 0001224456999999842 248999999999999 57899
Q ss_pred eCCCcCccCHHHHHHHHhc-CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 271 SDGLWEQLSDEAAVEIVSR-NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 271 SDGlwd~ls~~ei~~iv~~-~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
||||||.++++++.+++.. .++++++.|++.|+.+++. ||+|+|++.
T Consensus 185 SDGl~d~~~~~~i~~~~~~~~~~~~a~~l~~~a~~~g~~--DniTvivv~ 232 (234)
T 2jfr_A 185 SDGLFAAADEALIVDAATSPDPQVAVRRLVEVANDAGGS--DNTTVVVID 232 (234)
T ss_dssp CGGGGTTSCHHHHHHHHTCSSHHHHHHHHHHHHHHTTCC--SCEEEEEEE
T ss_pred CCCCccccCHHHHHHHHccCCHHHHHHHHHHHHHHcCCC--CCeEEEEEE
Confidence 9999999999999999932 5788999999999988887 999999986
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00 E-value=2.9e-35 Score=259.22 Aligned_cols=202 Identities=20% Similarity=0.184 Sum_probs=152.2
Q ss_pred ecCCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHHHHHHhhcccCCCccCcCceEE
Q 020117 56 FTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCL 135 (331)
Q Consensus 56 ~~~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~ 135 (331)
..+++..+|+|||||||+.+++++++.+.+.+.+....... +++++..+++.+.+.... ......+|||++
T Consensus 5 ~~~~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~-----~~~~~~~an~~l~~~~~~----~~~~~~~GtT~~ 75 (211)
T 3rnr_A 5 GTGGDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGS-----PLDAVLAAQAAVHRWASQ----GGILGRTGATMA 75 (211)
T ss_dssp EEETTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCC-----HHHHHHHHHHHHHHHHHH----TTCTTSCCEEEE
T ss_pred eECCCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCC-----HHHHHHHHHHHHHHHHhh----ccCCCCcchhhe
Confidence 35677899999999998887777777777777654433221 368888888888876532 334556899999
Q ss_pred EEEEE--CCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEEeeCCeeeecCcc
Q 020117 136 VGVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGII 213 (331)
Q Consensus 136 ~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l 213 (331)
++++. +++++++|+||||+|++|++ .+++||+||++.++.++... . | . ..+...
T Consensus 76 ~~~i~~~~~~~~~anvGDSr~yl~r~g---------~~~~lt~dh~~~~~~~~~g~-~--~--------~----~~~~~~ 131 (211)
T 3rnr_A 76 VAAVNLRDGTLEWASVGDCRVYLFKGG---------RLSRLSLDHNVSSEMVLLGR-G--P--------V----PGPAGE 131 (211)
T ss_dssp EEEEETTTTEEEEEEESSCEEEEEETT---------EEEECCCCCBHHHHHHHTTS-C--C--------C----CSHHHH
T ss_pred eeeeeeCCCEEEEEEEccCeEEEEeCC---------EEEEECCCcHHHHHHHHcCC-C--h--------h----hCCCcc
Confidence 99999 99999999999999999987 69999999999765544322 0 1 0 112223
Q ss_pred cccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeE--EEEEcCCCCeEEEEEeCCCcCccCHHHHHHHHhcCc
Q 020117 214 QVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSI--LIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNP 291 (331)
Q Consensus 214 ~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v--~~~~L~~~d~fLVL~SDGlwd~ls~~ei~~iv~~~~ 291 (331)
.+||+||.... .+|++ ..++++++|. ||||||||||+++++++.+++.+.+
T Consensus 132 ~ltralG~~~~--------------------------~~~~~~~~~~~l~~gd~-llL~SDGl~d~~~~~~i~~~l~~~~ 184 (211)
T 3rnr_A 132 MITSFIGIENL--------------------------TEISTSEAPLPLEAGEG-VLVVSDGVYRSLHEDRIAMALSRGS 184 (211)
T ss_dssp CBSCCBTCSSC--------------------------CCCEECSSCEECCTTCE-EEEEEC-----CCTTEEEEEECTTS
T ss_pred EEecccCCCCC--------------------------cceeEecceecCCCCCE-EEEEcCCCCCCcCHHHHHHHHhcCC
Confidence 58999998432 27888 7899999995 5699999999999999999998765
Q ss_pred cchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 292 RSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 292 ~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
. ++.|++.|+.++....||+|+|+|+
T Consensus 185 ~--a~~L~~~a~~~g~~~~DNiTvivv~ 210 (211)
T 3rnr_A 185 D--ARGILQEVEAQGRPYQDNATLALVI 210 (211)
T ss_dssp C--HHHHHHHHHHSCTTSCSSCEEEEEE
T ss_pred h--HHHHHHHHHHcCCCCCCceEEEEEe
Confidence 5 9999999999882233999999986
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.78 E-value=9.2e-19 Score=156.48 Aligned_cols=187 Identities=16% Similarity=0.176 Sum_probs=123.4
Q ss_pred cccccccceEEec-CCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHHHHHHhhccc
Q 020117 45 ANSMLEDQGQVFT-SPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSA 123 (331)
Q Consensus 45 ~r~~~ED~~~~~~-~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~ 123 (331)
++....|.|.++. .++..+++|+||+|+...|.+++..+...+........ . ..+++..+|+.+....
T Consensus 19 ~~~v~GD~y~~~~~~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~~-~----~~~~l~~~n~~l~~~~------ 87 (242)
T 3t91_A 19 GGLVSGDSYSMMELGARKYAAAISDGMGNGARAHFESNETIKLLEKILESGI-D----EKIAIKTINSILSLRT------ 87 (242)
T ss_dssp SCSCCSCEEEEEEETTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHTC-C----HHHHHHHHHHHHTTC-------
T ss_pred ccccCCcEEEEEEeCCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhCC-C----HHHHHHHHHHHHHhcC------
Confidence 4678999998864 55567799999999776554444444444443322211 1 3455566666654321
Q ss_pred CCCccCcCceEEEEEEE--CCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEE
Q 020117 124 RPQIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVV 201 (331)
Q Consensus 124 ~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~ 201 (331)
...+++|++++++. +++++++|+||||+|++|++ .+.+++.++.+
T Consensus 88 ---~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g---------~~~~l~~~~~~--------------------- 134 (242)
T 3t91_A 88 ---TDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGD---------QVMKVQASNLP--------------------- 134 (242)
T ss_dssp ------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETT---------EEEECCCC------------------------
T ss_pred ---CCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECC---------EEEEecCCCce---------------------
Confidence 12467999998887 78999999999999999976 46666543221
Q ss_pred eeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccC--
Q 020117 202 FSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLS-- 279 (331)
Q Consensus 202 ~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls-- 279 (331)
+|-... .+++...+.|.++|. |+||||||||.++
T Consensus 135 -----------------lG~~~~--------------------------~~~~~~~~~l~~GD~-lll~SDGl~e~~~~~ 170 (242)
T 3t91_A 135 -----------------IGIINE--------------------------FDVEVVSEQLKAGDL-LIMMSDGIFEGPKHV 170 (242)
T ss_dssp -------------------CCCT--------------------------TCEEEEEEECCTTCE-EEEECHHHHTCSTTC
T ss_pred -----------------eEecCC--------------------------CcceEEEEEeCCCCE-EEEECCCcccCCCcc
Confidence 232110 156678899999995 6699999999998
Q ss_pred ---HHHHHHHHhc----CccchHHHHHHHhcCCC-CcccCCceEEEEe
Q 020117 280 ---DEAAVEIVSR----NPRSVRPQLKTYAVYPS-QVWDRPMSFILHA 319 (331)
Q Consensus 280 ---~~ei~~iv~~----~~~~~a~~L~~~a~~~~-~~~~dn~s~ivv~ 319 (331)
...+.+++.. .+++.++.|++.+...+ ....||+|+++++
T Consensus 171 ~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvv~i~ 218 (242)
T 3t91_A 171 ENHDLWMKRKMKGLKTNDPQEIADLLMEEVIRTRSGQIEDDMTVVVVR 218 (242)
T ss_dssp SCHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHTTSCCCSCEEEEEEE
T ss_pred cchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCCceEEEEEE
Confidence 6677788764 46788899998887654 3246999999987
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.75 E-value=8.5e-17 Score=143.98 Aligned_cols=187 Identities=15% Similarity=0.101 Sum_probs=133.8
Q ss_pred cccccccceEEecCC-CceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHHHHHHhhccc
Q 020117 45 ANSMLEDQGQVFTSP-SATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSA 123 (331)
Q Consensus 45 ~r~~~ED~~~~~~~~-~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~ 123 (331)
++....|.|.++..+ +..+++|+||+|+...|..++..+...+.+...... ...+++..+|+.+....
T Consensus 22 ~~~vgGD~y~~~~~~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~-----~~~~~l~~~n~~l~~~~------ 90 (242)
T 3pu9_A 22 GTRESGDTVELVERPGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGV-----RDGAAARAAHDFLYAMR------ 90 (242)
T ss_dssp TCSSCSEEEEEEECTTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTC-----CHHHHHHHHHHHHHHHT------
T ss_pred ccccCCceEEEEEeCCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHHHHHHHHHhcc------
Confidence 356778999887544 556799999999888777777766666655433211 13466777777775432
Q ss_pred CCCccCcCceEEEEEEE--CCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEE
Q 020117 124 RPQIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVV 201 (331)
Q Consensus 124 ~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~ 201 (331)
...+.+|++++++. .++++++|+||+++|+++++ .+++|+.+|.+
T Consensus 91 ---~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g---------~~~~l~~~~~~--------------------- 137 (242)
T 3pu9_A 91 ---DGKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNG---------EFEQISESGGR--------------------- 137 (242)
T ss_dssp ---TTCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETT---------EEEEECCCCCC---------------------
T ss_pred ---CCCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECC---------EEEEeCCCCcc---------------------
Confidence 12357899888886 67999999999999999976 57788776543
Q ss_pred eeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccC--
Q 020117 202 FSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLS-- 279 (331)
Q Consensus 202 ~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls-- 279 (331)
+|-... .+++...+.|.++|. |+|+||||+|..+
T Consensus 138 -----------------lG~~~~--------------------------~~~~~~~~~l~~Gd~-lll~TDGl~e~~~~~ 173 (242)
T 3pu9_A 138 -----------------IGIYRH--------------------------TRPRVLEFPAEPGLT-VILVSDGIIGAGGRR 173 (242)
T ss_dssp -----------------BSSCTT--------------------------CCCEEEEEECCTTCE-EEEECHHHHTTTTTT
T ss_pred -----------------ccccCC--------------------------CCceEEEEEeCCCCE-EEEECcCcccCCCCc
Confidence 232110 155677899999995 6689999998764
Q ss_pred -----HHHHHHHHhc---CccchHHHHHHHhcCCC-CcccCCceEEEEe
Q 020117 280 -----DEAAVEIVSR---NPRSVRPQLKTYAVYPS-QVWDRPMSFILHA 319 (331)
Q Consensus 280 -----~~ei~~iv~~---~~~~~a~~L~~~a~~~~-~~~~dn~s~ivv~ 319 (331)
.+++..++.. .+++.++.|++.+...+ ....||+|+++++
T Consensus 174 ~~~~g~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvlvv~ 222 (242)
T 3pu9_A 174 GQPLEFLATGGRVAGPETPAQAIADELLEAALVADDGRAGDDMTVVVLR 222 (242)
T ss_dssp TCCCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHTTTSCSSCEEEEEEE
T ss_pred cccccHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEE
Confidence 4788666542 47888999999887644 2246999999987
No 21
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.65 E-value=5.8e-15 Score=127.52 Aligned_cols=177 Identities=14% Similarity=0.106 Sum_probs=125.3
Q ss_pred cccccccceEEecCCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHHHHHHhhcccC
Q 020117 45 ANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSAR 124 (331)
Q Consensus 45 ~r~~~ED~~~~~~~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~ 124 (331)
+.....|.|.+...++..+++|+||.|....|..++..+...+.+.. .. . ..+.+..+|+.+..
T Consensus 15 ~~~v~GD~y~~~~~~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~~---~~-~---p~~il~~ln~~l~~--------- 78 (193)
T 3zt9_A 15 GEIACGDACLVKRVEGVIFLAVGDGIGHGPEAARAAEIAIASMESSM---NT-G---LVNIFQLCHRELRG--------- 78 (193)
T ss_dssp TCSSCSEEEEEEEETTEEEEEEEEESSSHHHHHHHHHHHHHHHHHHT---TS-C---HHHHHHHHHHHHTT---------
T ss_pred CCCCCCCeEEEEEeCCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcc---cC-C---HHHHHHHHHHHHhc---------
Confidence 46688899988777788999999999965555556666666665431 11 1 23445556665531
Q ss_pred CCccCcCceEEEEEEE--CCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEEe
Q 020117 125 PQIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVF 202 (331)
Q Consensus 125 ~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~ 202 (331)
..|+|++++.+. .+++.++|+|+++.|+++.+ ....+...+
T Consensus 79 ----~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~---------~~~~l~~~~------------------------ 121 (193)
T 3zt9_A 79 ----TRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAK---------GIITPLATP------------------------ 121 (193)
T ss_dssp ----SSCEEEEEEEEETTTTEEEEEEESSCEEEEEETT---------EEECCCCBC------------------------
T ss_pred ----cCceEEEEEEEECCCCEEEEEecCCceEEEEcCC---------cEEEecCCC------------------------
Confidence 136788888787 67999999999999999976 233332100
Q ss_pred eCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccCHHH
Q 020117 203 SRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEA 282 (331)
Q Consensus 203 ~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls~~e 282 (331)
| .+|.... .+++...++++++|. |+|+||||++.++.++
T Consensus 122 --------g------~lG~~~~--------------------------~~~~~~~~~l~~gd~-l~l~sDGl~e~~~~~~ 160 (193)
T 3zt9_A 122 --------G------ILGYNYP--------------------------HQLLIAKGSYQEGDL-FLIHSDGIQEGAVPLA 160 (193)
T ss_dssp --------C------BBTTBCC--------------------------SSCCCEEEECCTTCE-EEEECTTSCTTCSCGG
T ss_pred --------C------ceeccCC--------------------------ccceeEEeccCCCCE-EEEECCCCCCccChhh
Confidence 0 1232100 034456789999995 6689999999999999
Q ss_pred HHHHHhcCccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 283 AVEIVSRNPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 283 i~~iv~~~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
+..++...++++|+.|++.+. .+ .||+|+++++
T Consensus 161 ~~~~~~~~~~~~a~~l~~~~~--~~--~Dd~tvlv~r 193 (193)
T 3zt9_A 161 LLANYRLTAEELVRLIGEKYG--RR--DDDVAVIVAR 193 (193)
T ss_dssp GGGCTTSCHHHHHHHHHHHHC--CT--TSCEEEEEEC
T ss_pred hhchhcCCHHHHHHHHHHHhC--cC--CCCeEEEEEC
Confidence 988887789999999999983 34 4999999975
No 22
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.64 E-value=2.2e-15 Score=135.51 Aligned_cols=192 Identities=18% Similarity=0.105 Sum_probs=116.5
Q ss_pred eeeccccccccceEEe-cCCCceEEEEecCCChhHHHHHHHHHHHHHHHhhhhh---cCCCcHHHHHHHHHHHHHHHHHH
Q 020117 41 AVVQANSMLEDQGQVF-TSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTE---QGGLSAEVIKKAFDATEEEFLHL 116 (331)
Q Consensus 41 ~~~~~r~~~ED~~~~~-~~~~~~l~~V~DGhGG~~as~~a~~~l~~~l~~~~~~---~~~~~~~~l~~a~~~~~~~l~~~ 116 (331)
.....+...-|.|-++ ..++..+++|+||+|+...|.+++..+...+...... ..........+++..+|+.+.+.
T Consensus 43 ~~~p~~~vgGD~yd~~~~~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~l~~~ 122 (255)
T 3f79_A 43 RIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINT 122 (255)
T ss_dssp EEECSSSSCSEEEEEEEETTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC----CHHHHHHHHHHHHBTT
T ss_pred EEeEhhhcCceEEeEEEeCCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHhc
Confidence 3344567788988555 5566789999999996665555555555444432211 00111223566777777776431
Q ss_pred HHhhcccCCCccCcCceEEEEEEE--CCEEEEEEcCC-ceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhC
Q 020117 117 VKRSWSARPQIASVGSCCLVGVIA--KDVLYVANLGD-SRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALH 193 (331)
Q Consensus 117 ~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGD-SR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~ 193 (331)
...+++|++++++. .++++++|+|+ ++.|+.+++ .+.+++.+|.|
T Consensus 123 ----------~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g---------~~~~l~~~~~~------------- 170 (255)
T 3f79_A 123 ----------KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEG---------QAGYLEGRGLP------------- 170 (255)
T ss_dssp ----------BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC-----------CEEECCC-----------------
T ss_pred ----------CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCC---------eEEEeCCCCce-------------
Confidence 23478999999995 67899999999 468888866 46777665533
Q ss_pred CCCCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCC
Q 020117 194 PDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDG 273 (331)
Q Consensus 194 ~~~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDG 273 (331)
+|-... .+++...+.+.++|. |+|+|||
T Consensus 171 -------------------------lG~~~~--------------------------~~~~~~~~~l~~gd~-lll~TDG 198 (255)
T 3f79_A 171 -------------------------VGLFDD--------------------------ATYDDRVMELPPSFS-LSLFSDG 198 (255)
T ss_dssp --------------------------CCSSC--------------------------CCCCC---BCCSSEE-EEEECSC
T ss_pred -------------------------EEEcCC--------------------------CceEEEEEEECCCCE-EEEECCC
Confidence 221100 133456678999995 6689999
Q ss_pred CcCccCHHH-------HHHHHhc---CccchHHHHHHHhcCCCCcccCCceEEEEe
Q 020117 274 LWEQLSDEA-------AVEIVSR---NPRSVRPQLKTYAVYPSQVWDRPMSFILHA 319 (331)
Q Consensus 274 lwd~ls~~e-------i~~iv~~---~~~~~a~~L~~~a~~~~~~~~dn~s~ivv~ 319 (331)
|++.++.++ +.+++.+ .++++++.|. .+...+. .||+|+++++
T Consensus 199 l~e~~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~l~-~~~~~~~--~DDiTvl~v~ 251 (255)
T 3f79_A 199 ILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFG-LANLAEM--PDDIALLVLS 251 (255)
T ss_dssp CCCCSCC---CCTTTSSHHHHHHHSCSSHHHHHHC------CCS--SSCEEEEEEE
T ss_pred cCcccCCCcchhhHHHHHHHHHhcCCCHHHHHHHHH-hccCCCC--CCCEEEEEEE
Confidence 999999887 8888865 3455555555 3333444 4999999987
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=98.98 E-value=2.8e-08 Score=94.92 Aligned_cols=184 Identities=16% Similarity=0.148 Sum_probs=112.0
Q ss_pred cccccceEEecCCCceEEEEecCCC-hhHHHHHHHHHHHHHHHhhhhhcCCCcHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 020117 47 SMLEDQGQVFTSPSATYVGVYDGHG-GPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARP 125 (331)
Q Consensus 47 ~~~ED~~~~~~~~~~~l~~V~DGhG-G~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~ 125 (331)
..-=|.|-++..++..+++|+|++| |-.+| ++...+...+...... ...+ ...+..+|+ +... .
T Consensus 50 ~vgGD~y~~~~~~~~~~~~v~Dv~GhGv~AA-~~~~~~~~~l~~~~~~-~~~p----~~il~~ln~-~~~~------~-- 114 (399)
T 3ke6_A 50 AAGGDWFDALALGDRLVLVVGDVVGHGVEAA-AVMSQLRTALRMQISA-GYTV----VEALEAVDR-FHKQ------V-- 114 (399)
T ss_dssp SCCSEEEEEEECSSEEEEEEEECSSCSHHHH-HHHHHHHHHHHHHHHT-TCCH----HHHHHHHHH-HGGG------S--
T ss_pred CCCCceEEEEEECCEEEEEEEEecCCCHHHH-HHHHHHHHHHHHHHhc-CCCH----HHHHHHHHH-HHHh------c--
Confidence 4556888777655588999999988 44444 3444444445443321 1112 233444454 2211 1
Q ss_pred CccCcCceEEEEEEE--CCEEEEEEcCCceEEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCCCCceEEee
Q 020117 126 QIASVGSCCLVGVIA--KDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFS 203 (331)
Q Consensus 126 ~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~ 203 (331)
...+++|++++.+. .+.+.++|+|..+.++++.+ + ....+..++.+
T Consensus 115 -~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~---g-----~~~~l~~~~~~----------------------- 162 (399)
T 3ke6_A 115 -PGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTAD---A-----SARYVEPTGAG----------------------- 162 (399)
T ss_dssp -TTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTT---S-----CEEECCCCSCC-----------------------
T ss_pred -CCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCC---C-----CEEEeecCCCc-----------------------
Confidence 12367888888886 67899999999999999854 2 24444333211
Q ss_pred CCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCcCccCH---
Q 020117 204 RGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSD--- 280 (331)
Q Consensus 204 ~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlwd~ls~--- 280 (331)
.+|-. ...+...+.|.++|. |+|+||||.|....
T Consensus 163 --------------plG~~----------------------------~~~~~~~~~l~~Gd~-l~l~TDGl~e~~~~~~~ 199 (399)
T 3ke6_A 163 --------------PLGSG----------------------------TGFPVRSEVLNIGDA-ILFYTDGLIERPGRPLE 199 (399)
T ss_dssp --------------CTTSS----------------------------CCCCCEEEECCTTCE-EEEECTTTTSCTTCCHH
T ss_pred --------------ceECC----------------------------CCceeEEEEECCCCE-EEEECCCcccCCCCCcc
Confidence 12210 012335688999995 66999999999865
Q ss_pred ---HHHHHHHhc-----------CccchHHHHHHHhcC---CCCcccCCceEEEEee
Q 020117 281 ---EAAVEIVSR-----------NPRSVRPQLKTYAVY---PSQVWDRPMSFILHAS 320 (331)
Q Consensus 281 ---~ei~~iv~~-----------~~~~~a~~L~~~a~~---~~~~~~dn~s~ivv~~ 320 (331)
+.+.+++.+ .+....+.+++.++. .+....|++|+++++-
T Consensus 200 ~g~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~DDitvl~vr~ 256 (399)
T 3ke6_A 200 ASTAEFADLAASIASGSGGFVLDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQR 256 (399)
T ss_dssp HHHHHHHHHHHHHTC----------CCHHHHHHHHHHHHHHHTTCCSSCEEEEEEEE
T ss_pred hhHHHHHHHHHHhhcccccccccChhhHHHHHHHHHHHHhccCCCCCCceEEEEEEe
Confidence 567777755 244556666665553 1223459999999873
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.27 E-value=1.8e-05 Score=74.85 Aligned_cols=186 Identities=15% Similarity=0.050 Sum_probs=97.7
Q ss_pred ccccccceEEe-cCCCceEEEEecCCC-hhHHH---HHHHHHHHHHHHhhhhh--cCCCcHHHHHHHHHHHHHHHHHHHH
Q 020117 46 NSMLEDQGQVF-TSPSATYVGVYDGHG-GPEAS---RFITRHLFPFLHKFTTE--QGGLSAEVIKKAFDATEEEFLHLVK 118 (331)
Q Consensus 46 r~~~ED~~~~~-~~~~~~l~~V~DGhG-G~~as---~~a~~~l~~~l~~~~~~--~~~~~~~~l~~a~~~~~~~l~~~~~ 118 (331)
...-=|.|-++ .+++...++|+|+.| |-.|| ..+...+...+...... ..... ....+..+|+.+.+.
T Consensus 187 ~~vgGD~yd~~~~~~~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~l~~ln~~l~~~-- 261 (394)
T 3eq2_A 187 LYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFK---PSEVLAHINRGLINT-- 261 (394)
T ss_dssp ---CCCEEECCEETTTEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCC---HHHHHHHHHHHHHHT--
T ss_pred hhcCccEEeEEEeCCCcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCC---HHHHHHHHHHHHhcc--
Confidence 44556777555 455668899999766 44433 33333333333221110 01111 334455667766531
Q ss_pred hhcccCCCccCcCceEEEEEEE--CCEEEEEEcCCce-EEEeeeecCCcccceeeeecccCCCCCCCHHHHHHHHhhCCC
Q 020117 119 RSWSARPQIASVGSCCLVGVIA--KDVLYVANLGDSR-AVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPD 195 (331)
Q Consensus 119 ~~~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR-~~l~r~~~~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~ 195 (331)
......|++++.+. .+.+.++|.|-.. .++.+++ .+..+.....
T Consensus 262 --------~~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g---------~~~~l~~~~~---------------- 308 (394)
T 3eq2_A 262 --------KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEG---------QAGYLEGRGL---------------- 308 (394)
T ss_dssp --------TCCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETT---------EEEECCCC------------------
T ss_pred --------CcCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCC---------ceEecCCCCc----------------
Confidence 12246788888886 6789999999865 4555543 3433332111
Q ss_pred CCceEEeeCCeeeecCcccccccccccccccCCCcCCcCCcccccCCCCCCCceeeeeeEEEEEcCCCCeEEEEEeCCCc
Q 020117 196 DSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLW 275 (331)
Q Consensus 196 ~~~~~~~~~~~~rv~G~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~~~v~~~P~v~~~~L~~~d~fLVL~SDGlw 275 (331)
.+|-..- .......+.|.++|. |+|.||||.
T Consensus 309 ----------------------plG~~~~--------------------------~~~~~~~~~l~~gd~-l~l~TDG~~ 339 (394)
T 3eq2_A 309 ----------------------PVGLFDD--------------------------ATYDDRVMELPPSFS-LSLFSDGIL 339 (394)
T ss_dssp ----------------------CCSCCCC--------------------------C--CCEEEECCSSCE-EEECSSCCC
T ss_pred ----------------------eeEecCC--------------------------CceEEEEEEeCCCCE-EEEECCCcc
Confidence 1222100 022345689999995 679999999
Q ss_pred CccCH-------HHHHHHHhcCccchHHHHHHHhcC-CCCcccCCceEEEEe
Q 020117 276 EQLSD-------EAAVEIVSRNPRSVRPQLKTYAVY-PSQVWDRPMSFILHA 319 (331)
Q Consensus 276 d~ls~-------~ei~~iv~~~~~~~a~~L~~~a~~-~~~~~~dn~s~ivv~ 319 (331)
|.... +.+.+++..... ..+.+.+.... .+....|++|+++++
T Consensus 340 e~~~~~~~~~~~~~l~~~l~~~~~-~~~~l~~~~~~~~~~~~~DDit~l~i~ 390 (394)
T 3eq2_A 340 DVLPGATLKEKEASLPEQVAAAGG-TLDGLRQVFGLANLAEMPDDIALLVLS 390 (394)
T ss_dssp C-----CCSTTTTTSHHHHHTTC---CHHHHHHHSCCCSCC--CCCEEEEEC
T ss_pred cccCcccchhhHHHHHHHHHhcch-hHHHHHHHhcccCCCCCCCceEEEEEe
Confidence 98543 456666665322 23444444433 334456999999886
No 25
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=35.98 E-value=1e+02 Score=25.27 Aligned_cols=69 Identities=19% Similarity=0.256 Sum_probs=41.8
Q ss_pred eeeeeeEEE---EEcCCC--CeEEEEEeCCC--c-CccCHHHHHHHHhcC---ccchHHHHHHHhcCCCCcccCCceEEE
Q 020117 249 MTAEPSILI---RKLKSN--DLFLIFASDGL--W-EQLSDEAAVEIVSRN---PRSVRPQLKTYAVYPSQVWDRPMSFIL 317 (331)
Q Consensus 249 v~~~P~v~~---~~L~~~--d~fLVL~SDGl--w-d~ls~~ei~~iv~~~---~~~~a~~L~~~a~~~~~~~~dn~s~iv 317 (331)
++++|++.. ++..++ +.|.|+-|||- | ..+|.++|.+..... .+.=.+.|.+ |+..+..-.+|.++.+
T Consensus 39 ~~sep~~~yfLqvsW~~~lgsGF~i~LTDGqSaW~G~VS~~~Is~eAd~m~Me~e~YV~eL~K-ALv~~~~~~~~y~F~~ 117 (186)
T 3q4f_C 39 LVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMAMEKGKYVGELRK-ALLSGAGPADVYTFNF 117 (186)
T ss_dssp ETTEEEEEEEEEEEESSCGGGEEEEEEECSSCEEEEEEEHHHHHHHHHHTTCCHHHHHHHHHH-HHSSCCCSSCCEEEEE
T ss_pred ecCCCCccEEEEEEeccCCCcceEEEEeCCcceeeeEECHHHHHHHHHHhcCcHHHHHHHHHH-HHhcCCCCCcceEEEe
Confidence 556787664 344454 78999999994 4 478999999988873 2333344443 4422222225655554
Q ss_pred E
Q 020117 318 H 318 (331)
Q Consensus 318 v 318 (331)
-
T Consensus 118 S 118 (186)
T 3q4f_C 118 S 118 (186)
T ss_dssp C
T ss_pred c
Confidence 3
No 26
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=30.53 E-value=1.3e+02 Score=24.47 Aligned_cols=68 Identities=19% Similarity=0.244 Sum_probs=42.3
Q ss_pred eeeeeeEEEE---EcCCC--CeEEEEEeCCC--c-CccCHHHHHHHHhcC---ccchHHHHHHHhcCCCCcccCCceEEE
Q 020117 249 MTAEPSILIR---KLKSN--DLFLIFASDGL--W-EQLSDEAAVEIVSRN---PRSVRPQLKTYAVYPSQVWDRPMSFIL 317 (331)
Q Consensus 249 v~~~P~v~~~---~L~~~--d~fLVL~SDGl--w-d~ls~~ei~~iv~~~---~~~~a~~L~~~a~~~~~~~~dn~s~iv 317 (331)
++++|.+..+ +..++ +.|.|+-|||- | ..+|.++|.+....- .+.=.+.|. .|+..+..-.+|.++.+
T Consensus 13 ~~s~p~~~yfL~v~w~~~l~~gf~i~ltDG~saW~g~Vs~~~i~~eA~~~~me~e~Yv~el~-kAl~~~~~~~~~~~f~~ 91 (175)
T 3mud_A 13 LVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMAMEKGKYVGELR-KALLSGAGPADVYTFNF 91 (175)
T ss_dssp ETTEEEEEEEEEEEESSCGGGEEEEEEECSSCEEEEEEEHHHHHHHHHHTTCCHHHHHHHHH-HHHTTCCCTTCCEEEEE
T ss_pred ecCCCCceEEEEEeccccCCcceEEEEeCCcceeeeeeCHHHHHHHHHHhcCcHHHHHHHHH-HHHhcCCCCCcceEEec
Confidence 5568887643 44444 78999999994 4 478999999998873 333334444 34433333236666655
No 27
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=29.55 E-value=89 Score=27.19 Aligned_cols=23 Identities=30% Similarity=0.463 Sum_probs=20.1
Q ss_pred EEEEec-CCChhHHHHHHHHHHHH
Q 020117 63 YVGVYD-GHGGPEASRFITRHLFP 85 (331)
Q Consensus 63 l~~V~D-GhGG~~as~~a~~~l~~ 85 (331)
-.|||| |.||-.+++.+.+.++.
T Consensus 9 pIgvfDSGvGGLtv~~~i~~~lp~ 32 (268)
T 3out_A 9 PIGVFDSGIGGLTIVKNLMSILPN 32 (268)
T ss_dssp CEEEEESSSTTHHHHHHHHHHCTT
T ss_pred cEEEEECCCChHHHHHHHHHHCCC
Confidence 479999 99999999999888874
Done!