BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020118
MTVIKLKSGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRA
QIWVAPRQWSWPLNLPLAFFGIFRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVA
FYHKPSRTLLVTDAVIFVPRKPPECISKESLLASAKNGLAVKILSKGKEVPQEPVVDNPM
NQQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDRI
VCDWRFRRIIPAHFAAPINASRSDFLAAFAFLDDLLGERYVTRPSLSLLFTSLMGKAASY
FPPDDMKTLSSLDEFLVSVGAVKKTVSGQKR

High Scoring Gene Products

Symbol, full name Information P value
AT3G01060 protein from Arabidopsis thaliana 7.4e-153

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020118
        (331 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2102162 - symbol:AT3G01060 "AT3G01060" species...  1491  7.4e-153  1
ASPGD|ASPL0000078194 - symbol:AN4711 species:162425 "Emer...   118  2.4e-05   2


>TAIR|locus:2102162 [details] [associations]
            symbol:AT3G01060 "AT3G01060" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0007623 "circadian rhythm"
            evidence=IEP] [GO:0010264 "myo-inositol hexakisphosphate
            biosynthetic process" evidence=RCA] EMBL:CP002686 GO:GO:0007623
            InterPro:IPR025638 Pfam:PF14234 EMBL:AY093064 IPI:IPI00533043
            RefSeq:NP_566129.1 UniGene:At.18324 ProteinModelPortal:Q8RWI4
            STRING:Q8RWI4 PRIDE:Q8RWI4 EnsemblPlants:AT3G01060.1 GeneID:821278
            KEGG:ath:AT3G01060 TAIR:At3g01060 InParanoid:Q8RWI4 OMA:QGLYYVA
            PhylomeDB:Q8RWI4 ProtClustDB:CLSN2687957 Genevestigator:Q8RWI4
            Uniprot:Q8RWI4
        Length = 455

 Score = 1491 (529.9 bits), Expect = 7.4e-153, P = 7.4e-153
 Identities = 285/331 (86%), Positives = 301/331 (90%)

Query:     1 MTVIKLKSGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRA 60
             MTVIKLKSGGLWVHAPIAPTKEC+QL+KEL APVEYI+LPTFAYEHKIFVGPFSRKFP+A
Sbjct:   124 MTVIKLKSGGLWVHAPIAPTKECVQLIKELGAPVEYIVLPTFAYEHKIFVGPFSRKFPKA 183

Query:    61 QIWVAPRQWSWPLNLPLAFFGIFRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVA 120
             Q+WVAPRQWSWPLNLPL FFGIFRAK + D DLSTPWA+EIEQKVLSSPEVGIGPYVEVA
Sbjct:   184 QVWVAPRQWSWPLNLPLEFFGIFRAKIIKDRDLSTPWAEEIEQKVLSSPEVGIGPYVEVA 243

Query:   121 FYHKPSRTLLVTDAVIFVPRKPPECISKESLLASAKNGLAVKILSKGKEVPQEPVVDNPM 180
             FYHK SRTLLVTDAVIFVPRKPP  IS ESLLASAKNGLAVKILSKGK++P +PVVDNP 
Sbjct:   244 FYHKRSRTLLVTDAVIFVPRKPPSSISNESLLASAKNGLAVKILSKGKDIPNDPVVDNPN 303

Query:   181 NQQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDRI 240
              +QKGWERMVLQILFLGPSNLLEPNASFA+MSQKLIVSPIVKTLVFSKVPEKVRDWID I
Sbjct:   304 TRQKGWERMVLQILFLGPSNLLEPNASFARMSQKLIVSPIVKTLVFSKVPEKVRDWIDEI 363

Query:   241 VCDWRFRRIIPAHFAAPINASRSXXXXXXXXXXXXXGERYVTRPSLSLLFTSLMGKAASY 300
               DWRF+RIIPAHF APINA RS             GERYVTRPSLSLLFTSLMGKAASY
Sbjct:   364 ARDWRFKRIIPAHFEAPINAGRSDFLAAFGFLEDLLGERYVTRPSLSLLFTSLMGKAASY 423

Query:   301 FPPDDMKTLSSLDEFLVSVGAVKKTVSGQKR 331
             FPPDDM+TLSSLD+FLVSVGAVKKTVSG+KR
Sbjct:   424 FPPDDMRTLSSLDQFLVSVGAVKKTVSGRKR 454


>ASPGD|ASPL0000078194 [details] [associations]
            symbol:AN4711 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] EMBL:BN001303 EMBL:AACD01000080 RefSeq:XP_662315.1
            EnsemblFungi:CADANIAT00005719 GeneID:2872508 KEGG:ani:AN4711.2
            eggNOG:NOG68122 HOGENOM:HOG000174015 OMA:LIPCHGD OrthoDB:EOG4BZRBF
            InterPro:IPR025638 Pfam:PF14234 Uniprot:Q5B419
        Length = 269

 Score = 118 (46.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
 Identities = 48/168 (28%), Positives = 77/168 (45%)

Query:     2 TVIKLKSGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQ 61
             T++++ SG + V +P+  T    + +  L   V+YI       EH I +  + + FP A 
Sbjct:    43 TLVRMTSGSIAVFSPVNLTPAVRETISGLGGRVKYIA--ALDLEHHIHLTAWKKAFPDAD 100

Query:    62 IWVAPRQ-W----SWPLNLPLAFFGIFRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPY 116
             I +AP   W    S P +       I R     +++ + P +DE  ++       G G  
Sbjct:   101 I-IAPEGLWEKRQSVPEHKDTPIKYILRQSNS-NKEHTWPISDEFNKEFDIEYVYGHGSK 158

Query:   117 VEVAFYHKPSRTLLVTDAVIFVPRKPPECISKESLLASAKNGLAVKIL 164
              E+ F HKPS TL+  D +  +P +  E  SK     SA +GL  KI+
Sbjct:   159 -EIVFLHKPSCTLIEADLLFNLPAR--EQYSKTG--ESATSGLWTKIV 201

 Score = 43 (20.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
 Identities = 6/10 (60%), Positives = 7/10 (70%)

Query:   244 WRFRRIIPAH 253
             W F R+IP H
Sbjct:   240 WEFNRLIPCH 249


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      331       318   0.00083  116 3  11 22  0.37    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  224 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.99u 0.09s 23.08t   Elapsed:  00:00:01
  Total cpu time:  22.99u 0.09s 23.08t   Elapsed:  00:00:01
  Start:  Sat May 11 02:43:09 2013   End:  Sat May 11 02:43:10 2013

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