Query 020118
Match_columns 331
No_of_seqs 187 out of 389
Neff 5.7
Searched_HMMs 46136
Date Fri Mar 29 07:09:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020118.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020118hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF14234 DUF4336: Domain of un 100.0 1.5E-78 3.2E-83 574.3 21.2 258 1-271 22-285 (285)
2 PF14597 Lactamase_B_5: Metall 99.5 6.1E-13 1.3E-17 119.2 16.5 166 8-270 31-197 (199)
3 TIGR03413 GSH_gloB hydroxyacyl 98.4 3.7E-05 7.9E-10 72.1 18.6 116 3-136 14-129 (248)
4 PLN02469 hydroxyacylglutathion 98.3 9E-05 2E-09 70.2 18.4 112 9-136 23-138 (258)
5 PLN02398 hydroxyacylglutathion 98.1 0.00017 3.7E-09 70.9 18.2 112 9-136 98-209 (329)
6 PRK10241 hydroxyacylglutathion 98.0 0.00067 1.4E-08 63.8 17.9 110 8-136 21-130 (251)
7 PLN02962 hydroxyacylglutathion 97.8 0.00028 6.1E-09 66.7 11.9 112 8-136 35-153 (251)
8 PRK05452 anaerobic nitric oxid 97.7 0.0011 2.5E-08 68.1 15.4 118 8-136 42-169 (479)
9 PRK11921 metallo-beta-lactamas 97.6 0.0011 2.4E-08 66.2 13.0 121 8-136 40-165 (394)
10 COG0426 FpaA Uncharacterized f 97.5 0.0024 5.3E-08 64.0 14.5 121 8-139 43-171 (388)
11 COG0491 GloB Zn-dependent hydr 96.8 0.017 3.7E-07 51.5 11.7 123 10-138 36-172 (252)
12 smart00849 Lactamase_B Metallo 95.7 0.13 2.8E-06 43.7 10.3 128 2-136 9-145 (183)
13 PF00753 Lactamase_B: Metallo- 92.9 0.38 8.3E-06 40.4 6.9 131 2-136 9-148 (194)
14 KOG0813 Glyoxylase [General fu 88.6 4.1 8.9E-05 39.2 10.1 115 10-141 26-147 (265)
15 PRK11539 ComEC family competen 80.9 23 0.00049 38.8 12.7 116 2-134 514-640 (755)
16 PF07521 RMMBL: RNA-metabolisi 57.1 12 0.00025 25.8 2.6 25 228-256 18-42 (43)
17 TIGR00361 ComEC_Rec2 DNA inter 56.4 31 0.00067 37.1 7.0 65 2-67 453-524 (662)
18 COG2333 ComEC Predicted hydrol 46.4 1.9E+02 0.0041 28.2 10.0 129 2-135 57-192 (293)
19 COG2875 CobM Precorrin-4 methy 31.7 28 0.00061 33.2 1.7 37 2-43 77-113 (254)
20 PLN02594 phosphatidate cytidyl 27.2 75 0.0016 31.8 3.9 73 244-323 266-341 (342)
21 COG0595 mRNA degradation ribon 24.2 1.1E+02 0.0023 32.7 4.6 67 1-67 24-100 (555)
22 COG0289 DapB Dihydrodipicolina 22.3 86 0.0019 30.3 3.2 57 8-64 92-153 (266)
23 PF09370 TIM-br_sig_trns: TIM- 21.9 1.5E+02 0.0033 28.7 4.7 37 230-269 198-234 (268)
24 PRK09375 quinolinate synthetas 21.6 1.5E+02 0.0033 29.3 4.8 58 7-69 155-217 (319)
25 COG2015 Alkyl sulfatase and re 21.2 1.6E+02 0.0035 31.2 5.0 67 1-68 128-203 (655)
26 KOG0814 Glyoxylase [General fu 20.6 3.1E+02 0.0067 25.4 6.2 114 6-136 29-143 (237)
27 TIGR00649 MG423 conserved hypo 20.4 2.2E+02 0.0047 28.6 5.8 68 1-69 16-94 (422)
No 1
>PF14234 DUF4336: Domain of unknown function (DUF4336)
Probab=100.00 E-value=1.5e-78 Score=574.35 Aligned_cols=258 Identities=52% Similarity=1.012 Sum_probs=247.2
Q ss_pred CEEEEeeCCcEEEEcCCCCCHHHHHHHHHh----cCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCCC
Q 020118 1 MTVIKLKSGGLWVHAPIAPTKECIQLVKEL----AAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLP 76 (331)
Q Consensus 1 MTVVRL~~G~L~V~sPva~T~e~~~~L~~L----g~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l~ 76 (331)
||||||++|+|||||||+||+||+++|++| | +|+|||+||..+|||+|+++|+++||+|+||++||+||+|.+++
T Consensus 22 MTVVrL~~G~L~VhSPvapT~el~~~l~~L~~~~G-~VkyIVaPn~~lEH~lfl~~w~~afP~A~v~~~Pg~~s~p~~lp 100 (285)
T PF14234_consen 22 MTVVRLSDGGLWVHSPVAPTPELKAELDELEAQHG-PVKYIVAPNKGLEHHLFLGPWARAFPDAKVWAPPGQWSFPLNLP 100 (285)
T ss_pred EEEEEECCCCEEEECCCCCCHHHHHHHHHHhccCC-ceeEEEcCCcchhHHHhHHHHHHHCCCCEEEeCCCcccccccCc
Confidence 999999999999999999999999999999 6 99999999977899999999999999999999999999999999
Q ss_pred CccccccccCccCCCCCCCCccCCeEEEEecCCCCCCCCcceEEEEEcCCceEEEccccccCCCCCCcccchh--hHHHh
Q 020118 77 LAFFGIFRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVIFVPRKPPECISKE--SLLAS 154 (331)
Q Consensus 77 l~~~g~~~~~~L~~~~~~~~~~~e~e~~~l~~~~~g~~~~~Ev~ffHk~SrTLivtDll~nlp~~~pe~~~~~--~ll~~ 154 (331)
++|.|++.++.+..++...+|++|||+.+|++.++|++.|+|++||||+|||||+||+++|+|+++|++++.+ |||||
T Consensus 101 ~~~~g~~~~~~l~~~~~~~pw~~eid~~~l~~~~lg~~~~~EvvFfHk~SkTLIvTDll~nip~~~p~~~~~d~~pll~~ 180 (285)
T PF14234_consen 101 LSWLGIPRDKTLPDDSDPPPWADEIDQEILGPLDLGSGPFQEVVFFHKPSKTLIVTDLLFNIPATPPEIFQLDPYPLLFH 180 (285)
T ss_pred hhhcCCccccccccccCCCCchhheeeEEecccccCCCceeEEEEEECCCCeEEhhhchhhCCCCCCcccCCCccchhhc
Confidence 9999999888887666788999999999999999999999999999999999999999999999999999976 77775
Q ss_pred hhcchhhHhhccCCCCCCCCCCCCccccchhhHHHHHHHHhhCCCCCCCCchhHHhhhhcccccceeeeeecccChHHHH
Q 020118 155 AKNGLAVKILSKGKEVPQEPVVDNPMNQQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVR 234 (331)
Q Consensus 155 a~~g~~~~~~~~~~~~~~~~~~d~~~~~~~gw~r~~l~~~~f~p~~~~~p~~~f~~~~~~~~v~Pi~~~l~~~~~~~~~r 234 (331)
+ ||.+++++.||+++|++||+||+|+++||+|+.+..|+.+|+++.+|++|+||+++|+|+|++++++
T Consensus 181 a------------r~~~~~~~~d~~~~r~~GW~r~~Lf~~y~~P~~l~~~~~sf~~~~~~l~vaPil~~Lv~~r~~~~~~ 248 (285)
T PF14234_consen 181 A------------RDRADEPVEDTPENRRKGWQRMVLFALYFRPSALEVPEASFDALSGRLFVAPILQTLVFPRAPEEVL 248 (285)
T ss_pred c------------cCCCCCCCCCCHHHHhhhHHHHhHhheeeccccccCchhhHHHHhCCceeCcchhheeccCCcHHHH
Confidence 5 5999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCCeEEecCCCccccCcHHHHHHHHHh
Q 020118 235 DWIDRIVCDWRFRRIIPAHFAAPINASRSDFLAAFAF 271 (331)
Q Consensus 235 ~w~~~i~~~Wdf~rIIpaHG~~i~~~~~~~~r~af~~ 271 (331)
+|+++|+..|+|+||||||++++++.++++||+||+|
T Consensus 249 ~w~~~v~~~w~f~~iip~H~~api~~~~~~~~~af~f 285 (285)
T PF14234_consen 249 AWVDRVASDWDFRRIIPAHFDAPIAATPEEFRAAFSF 285 (285)
T ss_pred HHHHHHhhhcCCcEEEecccCCcccCCHHHHHHHhCC
Confidence 9999998339999999999999999999999999986
No 2
>PF14597 Lactamase_B_5: Metallo-beta-lactamase superfamily; PDB: 2P97_B.
Probab=99.52 E-value=6.1e-13 Score=119.20 Aligned_cols=166 Identities=19% Similarity=0.223 Sum_probs=109.4
Q ss_pred CCcEEEEcCCCCCHHHHHHHHHhcCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCCCCccccccccCc
Q 020118 8 SGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLAFFGIFRAKT 87 (331)
Q Consensus 8 ~G~L~V~sPva~T~e~~~~L~~Lg~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l~l~~~g~~~~~~ 87 (331)
.+|-+++.|++++.+..+.|+++| .|+|||+.|. +|--....|++.| .|+||++++-.+. .|+.- ++.
T Consensus 31 p~GnilIDP~~ls~~~~~~l~a~g-gv~~IvLTn~--dHvR~A~~ya~~~-~a~i~~p~~d~~~---~p~~~-----D~~ 98 (199)
T PF14597_consen 31 PEGNILIDPPPLSAHDWKHLDALG-GVAWIVLTNR--DHVRAAEDYAEQT-GAKIYGPAADAAQ---FPLAC-----DRW 98 (199)
T ss_dssp TT--EEES-----HHHHHHHHHTT---SEEE-SSG--GG-TTHHHHHHHS---EEEEEGGGCCC----SS-------SEE
T ss_pred CCCCEEecCccccHHHHHHHHhcC-CceEEEEeCC--hhHhHHHHHHHHh-CCeeeccHHHHhh---CCCCC-----ccc
Confidence 345568899999999999999999 7999999997 8999999999999 9999999987643 22322 444
Q ss_pred cCCCCCCCCccCCeEEEEecCCCCCCCCcceEEEEEcCCceEEEccccccCCCCCCcccchhhHHHhhhcchhhHhhccC
Q 020118 88 LIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVIFVPRKPPECISKESLLASAKNGLAVKILSKG 167 (331)
Q Consensus 88 L~~~~~~~~~~~e~e~~~l~~~~~g~~~~~Ev~ffHk~SrTLivtDll~nlp~~~pe~~~~~~ll~~a~~g~~~~~~~~~ 167 (331)
+.+ .....+.|....+. |++...|+++|--. +|||++|++..-|+. -+.
T Consensus 99 l~d---ge~i~~g~~vi~l~----G~ktpGE~ALlled-~vLi~GDl~~~~~~g---~l~-------------------- 147 (199)
T PF14597_consen 99 LAD---GEEIVPGLWVIHLP----GSKTPGELALLLED-RVLITGDLLRSHPAG---SLS-------------------- 147 (199)
T ss_dssp E-T---T-BSSTTEEEEEE-----SSSSTTEEEEEETT-TEEEESSSEEBSSTT---S-E--------------------
T ss_pred ccc---CCCccCceEEEEcC----CCCCCceeEEEecc-ceEEecceeeecCCC---CeE--------------------
Confidence 432 23667889999986 67899999998877 499999999866553 110
Q ss_pred CCCCCCCCCCCccccchhhHHHHHHHHhhCCCCCCCCchhHHhhhhcccccceeeeeecccChHHHHHHHHHHHccC-CC
Q 020118 168 KEVPQEPVVDNPMNQQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDRIVCDW-RF 246 (331)
Q Consensus 168 ~~~~~~~~~d~~~~~~~gw~r~~l~~~~f~p~~~~~p~~~f~~~~~~~~v~Pi~~~l~~~~~~~~~r~w~~~i~~~W-df 246 (331)
+ - |..+ . .++.+++++++|++ .. +|
T Consensus 148 -----------------------l-----L------pd~k---~----------------~d~~~a~~sl~RLa-~~~~f 173 (199)
T PF14597_consen 148 -----------------------L-----L------PDEK---L----------------YDPTEARASLRRLA-AYPDF 173 (199)
T ss_dssp -----------------------E-------------GGG--------------------S-HHHHHHHHHHHH-T-TT-
T ss_pred -----------------------E-----C------ChHH---c----------------CCHHHHHHHHHHHh-ccccc
Confidence 0 0 1111 1 27789999999998 78 79
Q ss_pred CeEEecCCCccccCcHHHHHHHHH
Q 020118 247 RRIIPAHFAAPINASRSDFLAAFA 270 (331)
Q Consensus 247 ~rIIpaHG~~i~~~~~~~~r~af~ 270 (331)
|+|.+.||-.+..++++.+++..+
T Consensus 174 e~lLvGdGwpi~~~~r~rl~~L~~ 197 (199)
T PF14597_consen 174 EWLLVGDGWPIFRDARQRLRELVA 197 (199)
T ss_dssp -EEEESBB--B-S-HHHHHHHHHH
T ss_pred cEEeecCCchhhhhHHHHHHHHHh
Confidence 999999999999999999988654
No 3
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753).
Probab=98.38 E-value=3.7e-05 Score=72.11 Aligned_cols=116 Identities=18% Similarity=0.253 Sum_probs=82.5
Q ss_pred EEEeeCCcEEEEcCCCCCHHHHHHHHHhcCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCCCCccccc
Q 020118 3 VIKLKSGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLAFFGI 82 (331)
Q Consensus 3 VVRL~~G~L~V~sPva~T~e~~~~L~~Lg~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l~l~~~g~ 82 (331)
+|+-.+|..+|+.|-. ...+.+.|+++|.+|++|++.|.-..|...+..++++|| ++||++++.. .+ . .
T Consensus 14 li~~~~~~~ilID~g~-~~~i~~~l~~~g~~l~~Il~TH~H~DHigG~~~l~~~~~-~~V~~~~~~~-~~-~--~----- 82 (248)
T TIGR03413 14 LLHDPDGQAAVVDPGE-AEPVLDALEARGLTLTAILLTHHHHDHVGGVAELLEAFP-APVYGPAEER-IP-G--I----- 82 (248)
T ss_pred EEEcCCCCEEEEcCCC-hHHHHHHHHHcCCeeeEEEeCCCCccccCCHHHHHHHCC-CeEEeccccc-CC-C--C-----
Confidence 4444345789999864 567888999998789999999966789999999999997 9999987641 11 0 0
Q ss_pred cccCccCCCCCCCCccCCeEEEEecCCCCCCCCcceEEEEEcCCceEEEccccc
Q 020118 83 FRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVI 136 (331)
Q Consensus 83 ~~~~~L~~~~~~~~~~~e~e~~~l~~~~~g~~~~~Ev~ffHk~SrTLivtDll~ 136 (331)
+..+.+ .....+. ++++.++. ++.|....++++....++|+.+|+++
T Consensus 83 --~~~v~~-g~~~~~g-~~~i~v~~---tpGHT~g~i~~~~~~~~~lftGDtl~ 129 (248)
T TIGR03413 83 --THPVKD-GDTVTLG-GLEFEVLA---VPGHTLGHIAYYLPDSPALFCGDTLF 129 (248)
T ss_pred --cEEeCC-CCEEEEC-CEEEEEEE---CCCCCcccEEEEECCCCEEEEcCccc
Confidence 112211 1112333 34555543 35688889999998889999999997
No 4
>PLN02469 hydroxyacylglutathione hydrolase
Probab=98.26 E-value=9e-05 Score=70.18 Aligned_cols=112 Identities=9% Similarity=0.139 Sum_probs=78.6
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCCCCccccccccCcc
Q 020118 9 GGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLAFFGIFRAKTL 88 (331)
Q Consensus 9 G~L~V~sPva~T~e~~~~L~~Lg~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l~l~~~g~~~~~~L 88 (331)
+..+|+.|.. .+.+++.+++.|.+|++|++.|.-..|...+..++++||+|+||+........ . +..+
T Consensus 23 ~~~vlIDp~~-~~~il~~l~~~g~~l~~Il~TH~H~DH~gG~~~l~~~~~~~~V~~~~~~~~~~----~-------~~~v 90 (258)
T PLN02469 23 KDAAVVDPVD-PEKVLQAAHEHGAKIKLVLTTHHHWDHAGGNEKIKKLVPGIKVYGGSLDNVKG----C-------THPV 90 (258)
T ss_pred CeEEEECCCC-hHHHHHHHHHcCCcccEEEecCCCCccccCHHHHHHHCCCCEEEEechhcCCC----C-------CeEe
Confidence 4688999985 47788889998878999999997678888899999999999999875321110 1 1122
Q ss_pred CCCCCCCCccCCeEEEEecCCCCCCCCcceEEEEEcC----CceEEEccccc
Q 020118 89 IDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKP----SRTLLVTDAVI 136 (331)
Q Consensus 89 ~~~~~~~~~~~e~e~~~l~~~~~g~~~~~Ev~ffHk~----SrTLivtDll~ 136 (331)
.+ .....+++++.+.++. +.+|....+++|... .+.|+.+|++|
T Consensus 91 ~~-gd~i~lg~~~~~~vi~---tPGHT~ghi~~~~~~~~~~~~~lFtGDtLf 138 (258)
T PLN02469 91 EN-GDKLSLGKDVNILALH---TPCHTKGHISYYVTGKEGEDPAVFTGDTLF 138 (258)
T ss_pred CC-CCEEEECCceEEEEEE---CCCCCCCCEEEEeccCCCCCCEEEecCccc
Confidence 11 2222344434444443 468889999998763 35899999997
No 5
>PLN02398 hydroxyacylglutathione hydrolase
Probab=98.15 E-value=0.00017 Score=70.86 Aligned_cols=112 Identities=16% Similarity=0.148 Sum_probs=78.0
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhcCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCCCCccccccccCcc
Q 020118 9 GGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLAFFGIFRAKTL 88 (331)
Q Consensus 9 G~L~V~sPva~T~e~~~~L~~Lg~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l~l~~~g~~~~~~L 88 (331)
|..+|..|-. .+.+++.|++.|.++++|++.|.-..|...+..++++| +|+||+++.....-.. + +..+
T Consensus 98 ~~~~vVDP~~-a~~vl~~l~~~g~~L~~ILlTH~H~DH~GG~~~L~~~~-ga~V~g~~~~~~~i~~--~-------d~~v 166 (329)
T PLN02398 98 GTVGVVDPSE-AVPVIDALSRKNRNLTYILNTHHHYDHTGGNLELKARY-GAKVIGSAVDKDRIPG--I-------DIVL 166 (329)
T ss_pred CEEEEEcCCC-HHHHHHHHHhcCCCceEEEECCCCchhhCCHHHHHHhc-CCEEEEehHHhhhccC--C-------cEEe
Confidence 4567778854 46788889988878999999997678999999999999 6999998763321000 0 1122
Q ss_pred CCCCCCCCccCCeEEEEecCCCCCCCCcceEEEEEcCCceEEEccccc
Q 020118 89 IDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVI 136 (331)
Q Consensus 89 ~~~~~~~~~~~e~e~~~l~~~~~g~~~~~Ev~ffHk~SrTLivtDll~ 136 (331)
.+ .....+. +.++.++. +.+|....+++|....+.|+.+|++|
T Consensus 167 ~d-Gd~i~lg-g~~l~vi~---tPGHT~GhI~~~~~~~~vLFtGDtLf 209 (329)
T PLN02398 167 KD-GDKWMFA-GHEVLVME---TPGHTRGHISFYFPGSGAIFTGDTLF 209 (329)
T ss_pred CC-CCEEEEC-CeEEEEEe---CCCcCCCCEEEEECCCCEEEECCCcC
Confidence 11 1111122 33444443 46789999999998889999999997
No 6
>PRK10241 hydroxyacylglutathione hydrolase; Provisional
Probab=97.98 E-value=0.00067 Score=63.79 Aligned_cols=110 Identities=15% Similarity=0.152 Sum_probs=76.3
Q ss_pred CCcEEEEcCCCCCHHHHHHHHHhcCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCCCCccccccccCc
Q 020118 8 SGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLAFFGIFRAKT 87 (331)
Q Consensus 8 ~G~L~V~sPva~T~e~~~~L~~Lg~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l~l~~~g~~~~~~ 87 (331)
+|..+|+.|-. .+.+++.|++.|..+++|++.|.-..|...+..++++||+++||++........ +..
T Consensus 21 ~~~~ilIDpg~-~~~vl~~l~~~g~~l~~IllTH~H~DHigG~~~l~~~~~~~~V~~~~~~~~~~~-----------~~~ 88 (251)
T PRK10241 21 AGRCLIVDPGE-AEPVLNAIAENNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGT-----------TQV 88 (251)
T ss_pred CCcEEEECCCC-hHHHHHHHHHcCCccCEEEeCCCCchhhccHHHHHHHCCCCEEEecccccccCC-----------ceE
Confidence 56788899874 678899999998778999999965677788889999999999998765322110 111
Q ss_pred cCCCCCCCCccCCeEEEEecCCCCCCCCcceEEEEEcCCceEEEccccc
Q 020118 88 LIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVI 136 (331)
Q Consensus 88 L~~~~~~~~~~~e~e~~~l~~~~~g~~~~~Ev~ffHk~SrTLivtDll~ 136 (331)
+.+ .....+. ++++.++. +.+|....+++|.. +.|+.+|+++
T Consensus 89 v~~-g~~i~ig-~~~~~vi~---tPGHT~ghi~~~~~--~~lFtGDtlf 130 (251)
T PRK10241 89 VKD-GETAFVL-GHEFSVFA---TPGHTLGHICYFSK--PYLFCGDTLF 130 (251)
T ss_pred eCC-CCEEEeC-CcEEEEEE---cCCCCccceeeecC--CcEEEcCeec
Confidence 111 1111222 34444443 35788889999863 6899999997
No 7
>PLN02962 hydroxyacylglutathione hydrolase
Probab=97.79 E-value=0.00028 Score=66.74 Aligned_cols=112 Identities=15% Similarity=0.120 Sum_probs=78.3
Q ss_pred CCcEEEEcCCC-CCHHHHHHHHHhcCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCCCCccccccccC
Q 020118 8 SGGLWVHAPIA-PTKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLAFFGIFRAK 86 (331)
Q Consensus 8 ~G~L~V~sPva-~T~e~~~~L~~Lg~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l~l~~~g~~~~~ 86 (331)
+|.-+|+.|.. -.+.+++.|++.|.+|++|+..|.=..|...+..++++||+|++++.+..... . +.
T Consensus 35 ~~~avlIDP~~~~~~~~l~~l~~~g~~i~~Il~TH~H~DHigg~~~l~~~~~~a~v~~~~~~~~~-------~-----d~ 102 (251)
T PLN02962 35 DKPALLIDPVDKTVDRDLSLVKELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSIISKASGSK-------A-----DL 102 (251)
T ss_pred CCEEEEECCCCCcHHHHHHHHHHCCCeeEEEEcCCCCchhHHHHHHHHHHCCCCeEEeccccCCC-------C-----CE
Confidence 46678999974 34777888999887899999999767788888889899999999986532111 1 11
Q ss_pred ccCCCCCCCCccCCeEEEEecCCCCCCCCcceEEEEEc------CCceEEEccccc
Q 020118 87 TLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHK------PSRTLLVTDAVI 136 (331)
Q Consensus 87 ~L~~~~~~~~~~~e~e~~~l~~~~~g~~~~~Ev~ffHk------~SrTLivtDll~ 136 (331)
.+.+ .....+ +++++.++. +.+|....++|+.. ..+.|+.+|++|
T Consensus 103 ~l~~-g~~i~~-g~~~l~vi~---tPGHT~g~v~~~~~d~~~~~~~~~lftGD~Lf 153 (251)
T PLN02962 103 FVEP-GDKIYF-GDLYLEVRA---TPGHTAGCVTYVTGEGPDQPQPRMAFTGDALL 153 (251)
T ss_pred EeCC-CCEEEE-CCEEEEEEE---CCCCCcCcEEEEeccCCCCCccceEEECCeec
Confidence 2211 111233 345555543 46888999999875 357999999997
No 8
>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional
Probab=97.68 E-value=0.0011 Score=68.07 Aligned_cols=118 Identities=11% Similarity=0.073 Sum_probs=77.5
Q ss_pred CCcEEEEcCCC--CCHHHHHHHHHh-c-CCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCC---C-CCCcc
Q 020118 8 SGGLWVHAPIA--PTKECIQLVKEL-A-APVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPL---N-LPLAF 79 (331)
Q Consensus 8 ~G~L~V~sPva--~T~e~~~~L~~L-g-~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~---~-l~l~~ 79 (331)
++.-+|+.|.. ..++.++.|.+. + .+|+|||+.|.-..|...++.+.++||+|+|++++.....-. + .+..+
T Consensus 42 ~~~~vLIDtg~~~~~~~~l~~l~~~~~~~~Id~IilTH~H~DH~Ggl~~Ll~~~p~a~V~~s~~~~~~l~~~~~~~~~~~ 121 (479)
T PRK05452 42 EEKNVLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYCTANAIDSINGHHHHPEWNF 121 (479)
T ss_pred CCCEEEEeCCCcccHHHHHHHHHhcCCHhhCCEEEeCCCCcchhchHHHHHHHCCCCEEEECHHHHHHHHHhhcCCcCeE
Confidence 45567777764 356777877643 2 169999999977888888889999999999999876432100 0 01111
Q ss_pred ccccccCccCCCCCCCCccCC--eEEEEecCCCCCCCCcceEEEEEcCCceEEEccccc
Q 020118 80 FGIFRAKTLIDEDLSTPWADE--IEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVI 136 (331)
Q Consensus 80 ~g~~~~~~L~~~~~~~~~~~e--~e~~~l~~~~~g~~~~~Ev~ffHk~SrTLivtDll~ 136 (331)
..+.+ .....+++. +.+.... +.|....+++|....++|+.+|++=
T Consensus 122 ------~~v~~-G~~l~lG~~~~l~~i~tP----~~H~pgs~~~y~~~~~vLFsgD~fG 169 (479)
T PRK05452 122 ------NVVKT-GDTLDIGNGKQLIFVETP----MLHWPDSMMTYLTGDAVLFSNDAFG 169 (479)
T ss_pred ------EEeCC-CCEEecCCCcEEEEEECC----CCCCCCceEEEEcCCCEEEeccccc
Confidence 11211 222344433 4444332 3588889999999999999999974
No 9
>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional
Probab=97.56 E-value=0.0011 Score=66.20 Aligned_cols=121 Identities=12% Similarity=0.054 Sum_probs=76.3
Q ss_pred CCcEEEEcCCC--CCHHHHHHHHHh-cC-CeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCC-CCCccccc
Q 020118 8 SGGLWVHAPIA--PTKECIQLVKEL-AA-PVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLN-LPLAFFGI 82 (331)
Q Consensus 8 ~G~L~V~sPva--~T~e~~~~L~~L-g~-~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~-l~l~~~g~ 82 (331)
+++.+|+.+.. .++++++.|++. +. +++|||+.|.-..|...++.+.++||+++|++++.....-.. ....+
T Consensus 40 ~~~~vLIDtg~~~~~~~~~~~l~~~~~~~~Id~IilTH~H~DHiggl~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~--- 116 (394)
T PRK11921 40 DEKTVLIDTVWQPFAKEFVENLKKEIDLDKIDYIVANHGEIDHSGALPELMKEIPDTPIYCTKNGAKSLKGHYHQDW--- 116 (394)
T ss_pred CCCEEEEeCCCCCcHHHHHHHHHhhcCcccCCEEEeCCCCCchhhHHHHHHHHCCCCEEEECHHHHHHHHHHhCCCC---
Confidence 45667777763 457777777654 21 699999999778888888999999999999998763311000 00001
Q ss_pred cccCccCCCCCCCCccCCeEEEEecCCCCCCCCcceEEEEEcCCceEEEccccc
Q 020118 83 FRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVI 136 (331)
Q Consensus 83 ~~~~~L~~~~~~~~~~~e~e~~~l~~~~~g~~~~~Ev~ffHk~SrTLivtDll~ 136 (331)
....+.+ ......+ +.....+..+ +.|....+++|-+..++|+.+|++-
T Consensus 117 -~~~~v~~-g~~l~lG-~~~l~~i~tP--~~H~p~~~~~y~~~~~vLFsgD~fG 165 (394)
T PRK11921 117 -NFVVVKT-GDRLEIG-SNELIFIEAP--MLHWPDSMFTYLTGDNILFSNDAFG 165 (394)
T ss_pred -ceEEeCC-CCEEeeC-CeEEEEEeCC--CCCCCCceEEEEcCCCEEEecCccc
Confidence 0011111 1112232 3444444311 3488889999999999999999863
No 10
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=97.51 E-value=0.0024 Score=63.97 Aligned_cols=121 Identities=11% Similarity=0.072 Sum_probs=83.8
Q ss_pred CCcEEEEcCCC--CCHHHHHHHHHhcC--CeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCCCCcccccc
Q 020118 8 SGGLWVHAPIA--PTKECIQLVKELAA--PVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLAFFGIF 83 (331)
Q Consensus 8 ~G~L~V~sPva--~T~e~~~~L~~Lg~--~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l~l~~~g~~ 83 (331)
++...++.|+- .+++.++.|+.+-. ++.|||+-|..+.|-.-++.|.+.+|+|+++++.-...+- + +++
T Consensus 43 ~~k~aLID~~~~~~~~~~l~~l~~~id~k~iDYIi~~H~ePDhsg~l~~ll~~~p~a~ii~s~~~~~~L---~----~~~ 115 (388)
T COG0426 43 GDKTALIDTVGEKFFDEYLENLSKYIDPKEIDYIIVNHTEPDHSGSLPELLELAPNAKIICSKLAARFL---K----GFY 115 (388)
T ss_pred CCcEEEECCCCcchHHHHHHHHHhhcChhcCeEEEECCCCcchhhhHHHHHHhCCCCEEEeeHHHHHHH---H----Hhc
Confidence 67788888884 56788888888763 5999999999999999999999999999998765422210 0 000
Q ss_pred ccC---ccCCCCCCCCcc-CCeEEEEecCCCCCCCCcceEEEEEcCCceEEEccccccCC
Q 020118 84 RAK---TLIDEDLSTPWA-DEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVIFVP 139 (331)
Q Consensus 84 ~~~---~L~~~~~~~~~~-~e~e~~~l~~~~~g~~~~~Ev~ffHk~SrTLivtDll~nlp 139 (331)
.+. ..........++ .++++..-. -.|.......|.+.++.|..+|+.-...
T Consensus 116 ~~~~~~~ivk~Gd~ldlGg~tL~Fi~ap----~LHWPd~m~TYd~~~kILFS~D~fG~h~ 171 (388)
T COG0426 116 HDPEWFKIVKTGDTLDLGGHTLKFIPAP----FLHWPDTMFTYDPEDKILFSCDAFGAHV 171 (388)
T ss_pred CCccceeecCCCCEeccCCcEEEEEeCC----CCCCCCceeEeecCCcEEEccccccccc
Confidence 000 011112223444 355555532 4667888999999999999999986443
No 11
>COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only]
Probab=96.85 E-value=0.017 Score=51.51 Aligned_cols=123 Identities=14% Similarity=0.051 Sum_probs=76.7
Q ss_pred cEEEEcCCCCC---HHHHHHHHHhcCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCCCCcccc-----
Q 020118 10 GLWVHAPIAPT---KECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLAFFG----- 81 (331)
Q Consensus 10 ~L~V~sPva~T---~e~~~~L~~Lg~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l~l~~~g----- 81 (331)
+.+|+++-..+ ..+.+.+.++|.+|++||+.|.-..|...+..+++.++.|+++..+............+.+
T Consensus 36 ~~~liD~G~~~~~~~~~~~~l~~~~~~i~~vilTH~H~DH~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (252)
T COG0491 36 GAVLIDTGLGDADAEALLEALAALGLDVDAILLTHGHFDHIGGAAVLKEAFGAAPVIAPAEVPLLLREEILRKAGVTAEA 115 (252)
T ss_pred ceEEEeCCCCchHHHHHHHHHHHcCCChheeeecCCchhhhccHHHHHhhcCCceEEccchhhhhhhccccccccccccc
Confidence 67788887665 5677788888867999999997677888888899988878884444322110000000100
Q ss_pred cccc-----CccCCCCCCCCccC-CeEEEEecCCCCCCCCcceEEEEEcCCceEEEccccccC
Q 020118 82 IFRA-----KTLIDEDLSTPWAD-EIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVIFV 138 (331)
Q Consensus 82 ~~~~-----~~L~~~~~~~~~~~-e~e~~~l~~~~~g~~~~~Ev~ffHk~SrTLivtDll~nl 138 (331)
.... ..+.+ .....+.+ .++.. .+++|....++++.+..+.|+++|+++.-
T Consensus 116 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~i-----~tpGHT~g~~~~~~~~~~~l~~gD~~~~~ 172 (252)
T COG0491 116 YAAPGASPLRALED-GDELDLGGLELEVL-----HTPGHTPGHIVFLLEDGGVLFTGDTLFAG 172 (252)
T ss_pred CCCCccccceecCC-CCEEEecCeEEEEE-----ECCCCCCCeEEEEECCccEEEecceeccC
Confidence 0000 00000 11112222 23333 35789999999999999999999999743
No 12
>smart00849 Lactamase_B Metallo-beta-lactamase superfamily. Apart from the beta-lactamases a number of other proteins contain this domain PUBMED:7588620. These proteins include thiolesterases, members of the glyoxalase II family, that catalyse the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid and a competence protein that is essential for natural transformation in Neisseria gonorrhoeae and could be a transporter involved in DNA uptake. Except for the competence protein these proteins bind two zinc ions per molecule as cofactor.
Probab=95.68 E-value=0.13 Score=43.75 Aligned_cols=128 Identities=16% Similarity=0.113 Sum_probs=76.3
Q ss_pred EEEEeeCCcEEEEcCC-CCCHHHHHHHHHhcC-CeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCC----
Q 020118 2 TVIKLKSGGLWVHAPI-APTKECIQLVKELAA-PVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNL---- 75 (331)
Q Consensus 2 TVVRL~~G~L~V~sPv-a~T~e~~~~L~~Lg~-~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l---- 75 (331)
.+|+- +|+.+|+.|- .....+.+.|+++|. +|++||+.|.-..|...++.+.++ +++++|+++.....-...
T Consensus 9 ~li~~-~~~~iliD~g~~~~~~~~~~l~~~~~~~i~~i~iTH~H~DH~~g~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 86 (183)
T smart00849 9 YLVEG-DGGAILIDTGPGEAEDLLAELKKLGPKDIDAIILTHGHPDHIGGLPELLEA-PGAPVYAPEGTAELLKDLLKLG 86 (183)
T ss_pred EEEEe-CCceEEEeCCCChhHHHHHHHHHcCchhhcEEEecccCcchhccHHHHHhC-CCCcEEEchhhhHHHhccchhc
Confidence 56777 4666777766 444466666888764 799999999777888888888887 799999887765321100
Q ss_pred --CCcccccc-ccCccCCCCCCCCccCCeEEEEecCCCCCCCCcceEEEEEcCCceEEEccccc
Q 020118 76 --PLAFFGIF-RAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVI 136 (331)
Q Consensus 76 --~l~~~g~~-~~~~L~~~~~~~~~~~e~e~~~l~~~~~g~~~~~Ev~ffHk~SrTLivtDll~ 136 (331)
+..+.... ....+.. .....+. +.++..+. ...|....++++-+..+.|+.+|+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~---~~~h~~~~~~~~~~~~~vl~~gD~~~ 145 (183)
T smart00849 87 GALGAEAPPPPPDRTLKD-GEELDLG-GLELEVIH---TPGHTPGSIVLYLPEGKILFTGDLLF 145 (183)
T ss_pred cccCcCCCCCccceecCC-CCEEEeC-CceEEEEE---CCCCCCCcEEEEECCCCEEEECCeee
Confidence 00000000 0011111 1222333 24444443 23455666777777788999999985
No 13
>PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain []. These proteins include thiolesterases, members of the glyoxalase II family, that catalyse the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid and a competence protein that is essential for natural transformation in Neisseria gonorrhoeae and could be a transporter involved in DNA uptake. Except for the competence protein these proteins bind two zinc ions per molecule as cofactor.; GO: 0016787 hydrolase activity; PDB: 3H3E_A 3Q6V_B 3SD9_B 3IOF_A 2GKL_A 1X8I_A 3FAI_A 2QDS_A 3IOG_A 3F9O_A ....
Probab=92.89 E-value=0.38 Score=40.40 Aligned_cols=131 Identities=8% Similarity=-0.025 Sum_probs=76.5
Q ss_pred EEEEeeCCcEEEEcCCCCCHHHHHHH---HHhc-CCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCCCC
Q 020118 2 TVIKLKSGGLWVHAPIAPTKECIQLV---KELA-APVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPL 77 (331)
Q Consensus 2 TVVRL~~G~L~V~sPva~T~e~~~~L---~~Lg-~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l~l 77 (331)
.+|+- +++.+|+.+-.-........ .... .+|++||+.|.-..|..-+..+.++++.+.+...............
T Consensus 9 ~li~~-~~~~iliD~G~~~~~~~~~~~~~~~~~~~~i~~vi~TH~H~DH~ggl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (194)
T PF00753_consen 9 YLIEG-GDGAILIDTGLDPDFAKELELALLGISGEDIDAVILTHAHPDHIGGLPELLEAGPVVIIYSSADAAKAIRPPDR 87 (194)
T ss_dssp EEEEE-TTEEEEESEBSSHHHHHHHHHHHHHHTGGGEEEEEESSSSHHHHTTHHHHHHHTTEEEEEEHHHHHHHHHHHHH
T ss_pred EEEEE-CCEEEEEeCCCCchhhHHhhhhHhhccCCCeEEEEECcccccccccccccccccceeeeecccccccccccccc
Confidence 56775 67888888776666666542 2222 3899999999767899999999999987776654432211000000
Q ss_pred ccc-----cccccCccCCCCCCCCccCCeEEEEecCCCCCCCCcceEEEEEcCCceEEEccccc
Q 020118 78 AFF-----GIFRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVI 136 (331)
Q Consensus 78 ~~~-----g~~~~~~L~~~~~~~~~~~e~e~~~l~~~~~g~~~~~Ev~ffHk~SrTLivtDll~ 136 (331)
... ...........................+ ..+....++++-...+.|+.+|++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~vlftGD~~~ 148 (194)
T PF00753_consen 88 DSASRRGPAVPPPPIIDEDEDDLEIGGDRILFIIPG---PGHGSDSLIIYLPGGKVLFTGDLLF 148 (194)
T ss_dssp HHHHHHHHHHESEEEEEETTTEEEEETTEEEEEEES---SSSSTTEEEEEETTTTEEEEETTSC
T ss_pred ccccccccccccccceeeecccccccccccccceec---cccCCcceEEEeCCCcEEEeeeEec
Confidence 000 0000000000011122333344444332 4566778888889999999999997
No 14
>KOG0813 consensus Glyoxylase [General function prediction only]
Probab=88.61 E-value=4.1 Score=39.20 Aligned_cols=115 Identities=16% Similarity=0.190 Sum_probs=77.3
Q ss_pred cEEEEcCCCCCHHHHHHHHHh---cCCeeEEEccCCccccccChhhHHHhCC-CCEEEeCCCCCCCCCCCCCcccccccc
Q 020118 10 GLWVHAPIAPTKECIQLVKEL---AAPVEYIILPTFAYEHKIFVGPFSRKFP-RAQIWVAPRQWSWPLNLPLAFFGIFRA 85 (331)
Q Consensus 10 ~L~V~sPva~T~e~~~~L~~L---g~~Vk~IV~Pn~~~eH~l~~~~~~~~fP-~A~v~~~pg~~s~p~~l~l~~~g~~~~ 85 (331)
..++..|.-| +.+...++++ +..+.+|+..|.=..|--...++++.+| ++++++... ...+ .+ +
T Consensus 26 ~a~~vDP~~p-e~v~~~~~~~~~~~~~l~~Il~THhH~DHsGGn~~i~~~~~~~~~v~g~~~-~r~~-----~i-----~ 93 (265)
T KOG0813|consen 26 DADLVDPAEP-EYVIPSLKKLDDENRRLTAILTTHHHYDHSGGNEDIKREIPYDIKVIGGAD-DRIP-----GI-----T 93 (265)
T ss_pred eeeeecCcch-HHHHHHHHhhhhccCceeEEEeccccccccCcHHHHHhhccCCcEEecCCh-hcCc-----cc-----c
Confidence 3455666544 4455555553 2278999999975666677788888866 999997751 1111 11 2
Q ss_pred CccCCCCCCCCccCCeEEEEecCCCCCCCCcceEEEEEcC---CceEEEccccccCCCC
Q 020118 86 KTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKP---SRTLLVTDAVIFVPRK 141 (331)
Q Consensus 86 ~~L~~~~~~~~~~~e~e~~~l~~~~~g~~~~~Ev~ffHk~---SrTLivtDll~nlp~~ 141 (331)
+.+.+ ....-|+ +.+...+. +..|.-..+++|+.. .++|+.+|+|++....
T Consensus 94 ~~~~~-~e~~~~~-g~~v~~l~---TPgHT~~hi~~~~~~~~~e~~iFtGDtlf~~GcG 147 (265)
T KOG0813|consen 94 RGLKD-GETVTVG-GLEVRCLH---TPGHTAGHICYYVTESTGERAIFTGDTLFGAGCG 147 (265)
T ss_pred ccCCC-CcEEEEC-CEEEEEEe---CCCccCCcEEEEeecCCCCCeEEeCCceeecCcc
Confidence 22221 2233455 57777765 678999999999997 8999999999999873
No 15
>PRK11539 ComEC family competence protein; Provisional
Probab=80.90 E-value=23 Score=38.76 Aligned_cols=116 Identities=18% Similarity=0.108 Sum_probs=75.3
Q ss_pred EEEEeeCCcEEEEcCCCC-------CHHHHHHHHHhcCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCC
Q 020118 2 TVIKLKSGGLWVHAPIAP-------TKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLN 74 (331)
Q Consensus 2 TVVRL~~G~L~V~sPva~-------T~e~~~~L~~Lg~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~ 74 (331)
++|+- +|.-+++++=.- ...+...|++.|-++.+||+.|.+.+|.-.+....++||..+++.+.+....
T Consensus 514 ~li~~-~~~~lLiDtG~~~~~~~~~~~~i~P~L~~~Gi~lD~lilSH~d~DH~GGl~~Ll~~~~~~~i~~~~~~~~~--- 589 (755)
T PRK11539 514 VVIER-NGKAILYDTGNAWPTGDSAQQVIIPWLRWHGLTPEGIILSHEHLDHRGGLASLLHAWPMAWIRSPLNWANH--- 589 (755)
T ss_pred EEEEE-CCEEEEEeCCCCCCCCcchHHHHHHHHHHcCCCcCEEEeCCCCcccCCCHHHHHHhCCcceeeccCcccCc---
Confidence 57775 788889988642 2445667888887799999999989999999999999999999976432110
Q ss_pred CCCccccccccCccCCCCCCCCccCCeEEEEecCCCCC--CCCcceEEEEE--cCCceEEEccc
Q 020118 75 LPLAFFGIFRAKTLIDEDLSTPWADEIEQKVLSSPEVG--IGPYVEVAFYH--KPSRTLLVTDA 134 (331)
Q Consensus 75 l~l~~~g~~~~~~L~~~~~~~~~~~e~e~~~l~~~~~g--~~~~~Ev~ffH--k~SrTLivtDl 134 (331)
.+ . .....-.| +++++.++.|.... ......+++.- ...+.|+.+|+
T Consensus 590 ~~-----------~-~~g~~~~~-~~~~~~vL~P~~~~~~~~N~~S~Vl~i~~~~~~~LltGDi 640 (755)
T PRK11539 590 LP-----------C-VRGEQWQW-QGLTFSVHWPLEQSNDAGNNDSCVIRVDDGKHSILLTGDL 640 (755)
T ss_pred cc-----------c-cCCCeEeE-CCEEEEEEecCcccCCCCCCccEEEEEEECCEEEEEEeCC
Confidence 00 0 11112234 34777777654211 12233455543 34568888884
No 16
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=57.07 E-value=12 Score=25.81 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=20.3
Q ss_pred cChHHHHHHHHHHHccCCCCeEEecCCCc
Q 020118 228 KVPEKVRDWIDRIVCDWRFRRIIPAHFAA 256 (331)
Q Consensus 228 ~~~~~~r~w~~~i~~~Wdf~rIIpaHG~~ 256 (331)
-++++++.|++.+. .++||+.||+.
T Consensus 18 ad~~~L~~~i~~~~----p~~vilVHGe~ 42 (43)
T PF07521_consen 18 ADREELLEFIEQLN----PRKVILVHGEP 42 (43)
T ss_dssp -BHHHHHHHHHHHC----SSEEEEESSEH
T ss_pred CCHHHHHHHHHhcC----CCEEEEecCCC
Confidence 36789999999883 49999999973
No 17
>TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2. The role for this protein in species that are not naturally transformable is unknown.
Probab=56.45 E-value=31 Score=37.10 Aligned_cols=65 Identities=15% Similarity=0.102 Sum_probs=52.6
Q ss_pred EEEEeeCCcEEEEcCCCCC-------HHHHHHHHHhcCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCC
Q 020118 2 TVIKLKSGGLWVHAPIAPT-------KECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPR 67 (331)
Q Consensus 2 TVVRL~~G~L~V~sPva~T-------~e~~~~L~~Lg~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg 67 (331)
++|+. +|..+++..=.-. ..+...|++.|.++.+||+.|.+.+|.-.+....++||-.++|.+.+
T Consensus 453 ili~~-~~~~iLIDtG~~~~~~~~~~~~l~p~L~~~Gi~ID~lilTH~d~DHiGGl~~ll~~~~v~~i~~~~~ 524 (662)
T TIGR00361 453 MFIGA-NGKGILYDTGEPWREGSLGEKVIIPFLTAKGIKLEALILSHADQDHIGGAEIILKHHPVKRLVIPKG 524 (662)
T ss_pred EEEEE-CCeEEEEeCCCCCCCCCccHHHHHHHHHHcCCCcCEEEECCCchhhhCcHHHHHHhCCccEEEeccc
Confidence 67787 4677777765431 34777899998679999999988899999999999999999998766
No 18
>COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=46.38 E-value=1.9e+02 Score=28.25 Aligned_cols=129 Identities=18% Similarity=0.124 Sum_probs=74.9
Q ss_pred EEEEeeCCcEEEEcCCC--CCHHHHHHHHHhcC-CeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCCCCc
Q 020118 2 TVIKLKSGGLWVHAPIA--PTKECIQLVKELAA-PVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLA 78 (331)
Q Consensus 2 TVVRL~~G~L~V~sPva--~T~e~~~~L~~Lg~-~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l~l~ 78 (331)
++|+-+ +.-.++.+-. -+..++--|+++|- ++.++|+.|..-+|.-.+....+.|+==++|+..+..+..... +.
T Consensus 57 ~li~~~-~~~~l~dtg~~~~~~~iip~Lk~~GV~~iD~lIlTH~d~DHiGg~~~vl~~~~v~~~~i~~~~~~~~~~~-~~ 134 (293)
T COG2333 57 TLIRSE-GKTILYDTGNSMGQDVIIPYLKSLGVRKLDQLILTHPDADHIGGLDEVLKTIKVPELWIYAGSDSTSTFV-LR 134 (293)
T ss_pred EEEeeC-CceEEeecCcccCceeehhhHhHcCCccccEEEeccCCccccCCHHHHHhhCCCCcEEEeCCCCccchhh-hh
Confidence 456663 3355666555 77788889999996 5889999998889999999999955444555555544321100 00
Q ss_pred cccccccCccCCCCCCCCccCCeEEEEecCCC-CCCCCcc-eEEEEEc--CCceEEEcccc
Q 020118 79 FFGIFRAKTLIDEDLSTPWADEIEQKVLSSPE-VGIGPYV-EVAFYHK--PSRTLLVTDAV 135 (331)
Q Consensus 79 ~~g~~~~~~L~~~~~~~~~~~e~e~~~l~~~~-~g~~~~~-Ev~ffHk--~SrTLivtDll 135 (331)
-.++..... .....-+|.+ +.+.++.|.. .+...+. .+++.=. ..+.|+.+|+=
T Consensus 135 ~~~~~~~~~--~~G~~~~~~~-~~f~vl~P~~~~~~~~N~~S~Vl~v~~g~~s~LlTGD~e 192 (293)
T COG2333 135 DAGIPVRSC--KAGDSWQWGG-VVFQVLSPVGGVSDDLNNDSCVLRVTFGGNSFLLTGDLE 192 (293)
T ss_pred hcCCceecc--ccCceEEECC-eEEEEEcCCccccccccCcceEEEEEeCCeeEEEecCCC
Confidence 001110111 1122345655 8888888762 3333343 4444322 55677777764
No 19
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]
Probab=31.65 E-value=28 Score=33.21 Aligned_cols=37 Identities=22% Similarity=0.464 Sum_probs=31.2
Q ss_pred EEEEeeCCcEEEEcCCCCCHHHHHHHHHhcCCeeEEEccCCc
Q 020118 2 TVIKLKSGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFA 43 (331)
Q Consensus 2 TVVRL~~G~L~V~sPva~T~e~~~~L~~Lg~~Vk~IV~Pn~~ 43 (331)
+|+||.+|+.-+|+.+ -|-+++|+++| +.|=|+|..+
T Consensus 77 ~VvRLhSGDpsiYgA~---~EQm~~L~~~g--I~yevvPGVs 113 (254)
T COG2875 77 DVVRLHSGDPSIYGAL---AEQMRELEALG--IPYEVVPGVS 113 (254)
T ss_pred eEEEeecCChhHHHHH---HHHHHHHHHcC--CCeEEeCCch
Confidence 6999999999999987 46677777777 8999999964
No 20
>PLN02594 phosphatidate cytidylyltransferase
Probab=27.24 E-value=75 Score=31.81 Aligned_cols=73 Identities=16% Similarity=0.224 Sum_probs=49.3
Q ss_pred CCCCeEEecCCCccccCcHHHHHHHHHhh-hh-hhcccccCCCcchhhhhhhccCCCCCCC-cccHHHHHHHHHHHHHcC
Q 020118 244 WRFRRIIPAHFAAPINASRSDFLAAFAFL-DD-LLGERYVTRPSLSLLFTSLMGKAASYFP-PDDMKTLSSLDEFLVSVG 320 (331)
Q Consensus 244 Wdf~rIIpaHG~~i~~~~~~~~r~af~~L-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~l~~~~~~l~~~g 320 (331)
=||-.+||-||.+..+-...-+-.-|.++ .+ ..... .++.+ .+....-..++ +|.+++++.+.+.|.+.|
T Consensus 266 KDfG~~IPGHGGilDRfDs~l~~~~f~y~y~~~fi~~~---~~~~~----~il~~i~~~l~~~~q~~l~~~l~~~l~~~g 338 (342)
T PLN02594 266 KDFGDSIPGHGGITDRMDCQMVMAVFAYIYYQSFIVPQ---SVSVG----KLLDQILTLLTDEEQKELYVKLGQMLQERG 338 (342)
T ss_pred CcccCccCCCccccccccHHHHHHHHHHHHHHHHhcCC---CCCHH----HHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 37889999999999999999999888863 22 22211 12222 22222222244 448999999999999998
Q ss_pred ccc
Q 020118 321 AVK 323 (331)
Q Consensus 321 ~~~ 323 (331)
+-.
T Consensus 339 ~~~ 341 (342)
T PLN02594 339 LGL 341 (342)
T ss_pred CCC
Confidence 753
No 21
>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]
Probab=24.25 E-value=1.1e+02 Score=32.70 Aligned_cols=67 Identities=16% Similarity=0.106 Sum_probs=46.3
Q ss_pred CEEEEeeCCcEEEEcCCCCCHHHHHH----------HHHhcCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCC
Q 020118 1 MTVIKLKSGGLWVHAPIAPTKECIQL----------VKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPR 67 (331)
Q Consensus 1 MTVVRL~~G~L~V~sPva~T~e~~~~----------L~~Lg~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg 67 (331)
|+|+.+.+.-+++..=+.+.++-+=- |.+--.+|+.|++.|.-.+|...++-+..+++.+.||++|=
T Consensus 24 ~~vve~~~~i~i~D~G~~fp~~~~~gvDliIPd~~yl~~n~~kvkgI~lTHgHeDHIGaip~ll~~~~~~piy~s~l 100 (555)
T COG0595 24 MYVVEYGDDIIILDAGLKFPEDDLLGVDLIIPDFSYLEENKDKVKGIFLTHGHEDHIGALPYLLKQVLFAPIYASPL 100 (555)
T ss_pred eEEEEECCcEEEEECccccCccccccccEEecChHHhhhccccceEEEecCCchhhccchHHHHhcCCcCceecCHh
Confidence 78899966556666655555441100 11110179999999976788888999999998899998764
No 22
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=22.31 E-value=86 Score=30.32 Aligned_cols=57 Identities=19% Similarity=0.187 Sum_probs=46.3
Q ss_pred CCcEEEEcCCCCCHHHHHHHHHhcCCeeEEEccCCc---cccccChhhHHHhCC--CCEEEe
Q 020118 8 SGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFA---YEHKIFVGPFSRKFP--RAQIWV 64 (331)
Q Consensus 8 ~G~L~V~sPva~T~e~~~~L~~Lg~~Vk~IV~Pn~~---~eH~l~~~~~~~~fP--~A~v~~ 64 (331)
.|--+|.-.+-+|+|.++.|+++...|.-+++||.| .....++...++.++ +++++=
T Consensus 92 ~~~~lVIGTTGf~~e~~~~l~~~a~~v~vv~a~NfSiGvnll~~l~~~aak~l~~~DiEIiE 153 (266)
T COG0289 92 HGKPLVIGTTGFTEEQLEKLREAAEKVPVVIAPNFSLGVNLLFKLAEQAAKVLDDYDIEIIE 153 (266)
T ss_pred cCCCeEEECCCCCHHHHHHHHHHHhhCCEEEeccchHHHHHHHHHHHHHHHhcCCCCEEehh
Confidence 355578888999999999999998678899999988 455666777788888 777763
No 23
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=21.91 E-value=1.5e+02 Score=28.72 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHHccCCCCeEEecCCCccccCcHHHHHHHH
Q 020118 230 PEKVRDWIDRIVCDWRFRRIIPAHFAAPINASRSDFLAAF 269 (331)
Q Consensus 230 ~~~~r~w~~~i~~~Wdf~rIIpaHG~~i~~~~~~~~r~af 269 (331)
.+.+.++.+... +-+.|-|+.|||..+ ..+++.+..+
T Consensus 198 ~~~~~~i~~aa~-~v~~dii~l~hGGPI--~~p~D~~~~l 234 (268)
T PF09370_consen 198 AERIQEIFDAAR-AVNPDIIVLCHGGPI--ATPEDAQYVL 234 (268)
T ss_dssp HHHHHHHHHHHH-CC-TT-EEEEECTTB---SHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCeEEEEeCCCC--CCHHHHHHHH
Confidence 345555566554 678999999999997 5667666444
No 24
>PRK09375 quinolinate synthetase; Provisional
Probab=21.59 E-value=1.5e+02 Score=29.31 Aligned_cols=58 Identities=19% Similarity=0.173 Sum_probs=41.2
Q ss_pred eCCcEEEEcCCCCCHHHHHHHHHhcCCeeEEEccCCc-cccccC----hhhHHHhCCCCEEEeCCCCC
Q 020118 7 KSGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFA-YEHKIF----VGPFSRKFPRAQIWVAPRQW 69 (331)
Q Consensus 7 ~~G~L~V~sPva~T~e~~~~L~~Lg~~Vk~IV~Pn~~-~eH~l~----~~~~~~~fP~A~v~~~pg~~ 69 (331)
.++.-+|+.|...=.+..+. +. =+-|++|+.. .-|..| +..|+++||+|+|++-|...
T Consensus 155 ~~~~~IlF~PD~~Lg~~v~~---l~--~k~vilw~G~C~vH~~~~~e~i~~~r~~~Pda~Vv~HPEc~ 217 (319)
T PRK09375 155 PQGKKILFLPDQHLGRYVAK---QT--GADIILWPGHCIVHEEFTAEDLERLRAEYPDAKVLVHPECP 217 (319)
T ss_pred CCCCeEEEeCchHHHHHHHH---cC--CCEEEccCCcchhccCcCHHHHHHHHHHCcCCeEEEecCCC
Confidence 35777888887655544433 33 3558888866 777776 45688899999999998754
No 25
>COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.16 E-value=1.6e+02 Score=31.22 Aligned_cols=67 Identities=18% Similarity=0.132 Sum_probs=46.7
Q ss_pred CEEEEeeCCcEEEEcCCCCCHHHHHHHHHh----cC-CeeEEEccCCccccccChhhHHH----hCCCCEEEeCCCC
Q 020118 1 MTVIKLKSGGLWVHAPIAPTKECIQLVKEL----AA-PVEYIILPTFAYEHKIFVGPFSR----KFPRAQIWVAPRQ 68 (331)
Q Consensus 1 MTVVRL~~G~L~V~sPva~T~e~~~~L~~L----g~-~Vk~IV~Pn~~~eH~l~~~~~~~----~fP~A~v~~~pg~ 68 (331)
||.|+= |-|++|+.|.--++..+++|+-. |. ||+.+|-.|.--.|.-.+..... +--+.+|+++.|.
T Consensus 128 ITfveG-dtg~IViDpL~t~~tA~aAldl~~~~~g~rPV~aVIYtHsH~DHfGGVkGiv~eadV~sGkV~iiAP~GF 203 (655)
T COG2015 128 ITFVEG-DTGWIVIDPLVTPETAKAALDLYNQHRGQRPVVAVIYTHSHSDHFGGVKGIVSEADVKSGKVQIIAPAGF 203 (655)
T ss_pred eEEEcC-CcceEEEcccCCcHHHHHHHHHHHHhcCCCCeEEEEeecccccccCCeeeccCHHHcccCceeEecchhH
Confidence 688887 78899999999999999988754 33 89999998853445444433322 2335567777663
No 26
>KOG0814 consensus Glyoxylase [General function prediction only]
Probab=20.55 E-value=3.1e+02 Score=25.44 Aligned_cols=114 Identities=17% Similarity=0.149 Sum_probs=73.9
Q ss_pred eeCCcEEEEcCCCCCHHH-HHHHHHhcCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCCCCCCCCCCccccccc
Q 020118 6 LKSGGLWVHAPIAPTKEC-IQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLAFFGIFR 84 (331)
Q Consensus 6 L~~G~L~V~sPva~T~e~-~~~L~~Lg~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~s~p~~l~l~~~g~~~ 84 (331)
+.+|.-+++.||-=|..- .+.|++||-+..|-+..+.-..|.-..+-.+..+|..|-..+.-.-++.
T Consensus 29 ~~~~~AviIDPV~et~~RD~qlikdLgl~LiYa~NTH~HADHiTGtg~Lkt~~pg~kSVis~~SGakA------------ 96 (237)
T KOG0814|consen 29 HKTGKAVIIDPVLETVSRDAQLIKDLGLDLIYALNTHVHADHITGTGLLKTLLPGCKSVISSASGAKA------------ 96 (237)
T ss_pred CCCCceEEecchhhcccchHHHHHhcCceeeeeecceeecccccccchHHHhcccHHHHhhhcccccc------------
Confidence 357888999998655433 4578999966777777664456777778888899988765443222221
Q ss_pred cCccCCCCCCCCccCCeEEEEecCCCCCCCCcceEEEEEcCCceEEEccccc
Q 020118 85 AKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVI 136 (331)
Q Consensus 85 ~~~L~~~~~~~~~~~e~e~~~l~~~~~g~~~~~Ev~ffHk~SrTLivtDll~ 136 (331)
|.-+.+ .....+++ +-.+... +..|.+.-+.+.-+.-+..+.+|++.
T Consensus 97 D~~l~~-Gd~i~~G~-~~le~ra---tPGHT~GC~TyV~~d~~~aFTGDalL 143 (237)
T KOG0814|consen 97 DLHLED-GDIIEIGG-LKLEVRA---TPGHTNGCVTYVEHDLRMAFTGDALL 143 (237)
T ss_pred ccccCC-CCEEEEcc-EEEEEec---CCCCCCceEEEEecCcceeeecceeE
Confidence 112211 22223433 4444433 56788888888888889999999986
No 27
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=20.37 E-value=2.2e+02 Score=28.65 Aligned_cols=68 Identities=13% Similarity=0.111 Sum_probs=45.1
Q ss_pred CEEEEeeCCcEEEEcCCC-CCHH-H---------HHHHHHhcCCeeEEEccCCccccccChhhHHHhCCCCEEEeCCCCC
Q 020118 1 MTVIKLKSGGLWVHAPIA-PTKE-C---------IQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPRQW 69 (331)
Q Consensus 1 MTVVRL~~G~L~V~sPva-~T~e-~---------~~~L~~Lg~~Vk~IV~Pn~~~eH~l~~~~~~~~fP~A~v~~~pg~~ 69 (331)
|++|.. ++..+|..+=. ..++ + .+.|.+-..+|++|++.|.-..|...++.+.+.++.+.||+++...
T Consensus 16 ~~ll~~-~~~~iliD~G~~~~~~~~~g~~~~iPd~~~l~~~~~~i~~I~iTH~H~DHiggl~~l~~~~~~~~Vy~~~~t~ 94 (422)
T TIGR00649 16 MYVVEI-DDDVFIFDAGILFPEDAMLGVDGVIPDFSYLQENQDKVKGIFITHGHEDHIGAVPYLFHTVGFPPIYGTPLTI 94 (422)
T ss_pred EEEEEE-CCeEEEEeCCCCCCcccccCCccccCCHHHHHhccccCCEEEECCCChHHhCcHHHHHHhCCCCeEEeCHHHH
Confidence 456766 55555665433 2221 1 2234432337999999997688888888888889778999988743
Done!