BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 020119
         (331 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2D3A|A Chain A, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Methionine Sulfoximine Phosphate
 pdb|2D3A|B Chain B, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Methionine Sulfoximine Phosphate
 pdb|2D3A|C Chain C, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Methionine Sulfoximine Phosphate
 pdb|2D3A|D Chain D, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Methionine Sulfoximine Phosphate
 pdb|2D3A|E Chain E, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Methionine Sulfoximine Phosphate
 pdb|2D3A|F Chain F, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Methionine Sulfoximine Phosphate
 pdb|2D3A|G Chain G, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Methionine Sulfoximine Phosphate
 pdb|2D3A|H Chain H, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Methionine Sulfoximine Phosphate
 pdb|2D3A|I Chain I, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Methionine Sulfoximine Phosphate
 pdb|2D3A|J Chain J, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Methionine Sulfoximine Phosphate
 pdb|2D3B|A Chain A, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Amppnp And Methionine Sulfoximine
 pdb|2D3B|B Chain B, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Amppnp And Methionine Sulfoximine
 pdb|2D3B|C Chain C, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Amppnp And Methionine Sulfoximine
 pdb|2D3B|D Chain D, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Amppnp And Methionine Sulfoximine
 pdb|2D3B|E Chain E, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Amppnp And Methionine Sulfoximine
 pdb|2D3B|F Chain F, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Amppnp And Methionine Sulfoximine
 pdb|2D3B|G Chain G, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Amppnp And Methionine Sulfoximine
 pdb|2D3B|H Chain H, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Amppnp And Methionine Sulfoximine
 pdb|2D3B|I Chain I, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Amppnp And Methionine Sulfoximine
 pdb|2D3B|J Chain J, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Amppnp And Methionine Sulfoximine
 pdb|2D3C|A Chain A, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Phosphinothricin Phosphate
 pdb|2D3C|B Chain B, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Phosphinothricin Phosphate
 pdb|2D3C|C Chain C, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Phosphinothricin Phosphate
 pdb|2D3C|D Chain D, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Phosphinothricin Phosphate
 pdb|2D3C|E Chain E, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Phosphinothricin Phosphate
 pdb|2D3C|F Chain F, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Phosphinothricin Phosphate
 pdb|2D3C|G Chain G, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Phosphinothricin Phosphate
 pdb|2D3C|H Chain H, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Phosphinothricin Phosphate
 pdb|2D3C|I Chain I, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Phosphinothricin Phosphate
 pdb|2D3C|J Chain J, Crystal Structure Of The Maize Glutamine Synthetase
           Complexed With Adp And Phosphinothricin Phosphate
          Length = 356

 Score =  533 bits (1372), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 263/341 (77%), Positives = 283/341 (82%), Gaps = 25/341 (7%)

Query: 16  TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQ 75
           T+KIIAEYIWIGGSGMD+RSKARTLPGPV+DPSKLPKWNYDGSSTGQAPGEDSEVILYPQ
Sbjct: 16  TEKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQ 75

Query: 76  AIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLL 135
           AIFKDPFRRGNNILVMCD YTPAGEPIPTNKR++AAKIFS  +V AEEPWYGIEQEYTLL
Sbjct: 76  AIFKDPFRRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPEVAAEEPWYGIEQEYTLL 135

Query: 136 QKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMP 195
           QKD  WPL                   A+K++GRDIVD+HYKACLYAGINISGINGEVMP
Sbjct: 136 QKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYAGINISGINGEVMP 195

Query: 196 GQ-------------------------RITEIAGVVLSFDPKPIQGDWNGAGAHANYSTK 230
           GQ                         RITEIAGVV++FDPKPI GDWNGAGAH NYST+
Sbjct: 196 GQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTE 255

Query: 231 SMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASI 290
           SMR +GG+EVIK AIEKL LRH EHIAAYGEGNERRLTG+HETADINTF WGVANRGAS+
Sbjct: 256 SMRKEGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASV 315

Query: 291 RVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 331
           RVGR+TE+ GKGYFEDRRPASNMDPYVVTSMIAETTI+WKP
Sbjct: 316 RVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAETTIVWKP 356


>pdb|3FKY|A Chain A, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|B Chain B, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|C Chain C, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|D Chain D, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|E Chain E, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|F Chain F, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|G Chain G, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|H Chain H, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|I Chain I, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|J Chain J, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|K Chain K, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|L Chain L, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|M Chain M, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|N Chain N, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|O Chain O, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|P Chain P, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|Q Chain Q, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|R Chain R, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|S Chain S, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
 pdb|3FKY|T Chain T, Crystal Structure Of The Glutamine Synthetase Gln1deltan18
           From The Yeast Saccharomyces Cerevisiae
          Length = 370

 Score =  318 bits (816), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 169/339 (49%), Positives = 215/339 (63%), Gaps = 37/339 (10%)

Query: 18  KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAI 77
           +IIAEY+WI G+G ++RSK RTL   ++   +LP+WN+DGSST QAPG DS++ L P A 
Sbjct: 23  RIIAEYVWIDGTG-NLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAY 81

Query: 78  FKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFS-HSDVVAEEPWYGIEQEYTL-- 134
           + DPFRRG+NI+V+   Y   G P   N RH AAK+F+ H D   EE W+G+EQEYTL  
Sbjct: 82  YPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHKD---EEIWFGLEQEYTLFD 138

Query: 135 LQKDVK-WPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEV 193
           +  DV  WP                    A K + RD++++HY+ACLYAG+ ISGIN EV
Sbjct: 139 MYDDVYGWP----KGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEV 194

Query: 194 MPGQ-------------------------RITEIAGVVLSFDPKPIQGDWNGAGAHANYS 228
           MP Q                         R+ E  G+ +SF PKP++GDWNGAG HAN S
Sbjct: 195 MPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHANVS 254

Query: 229 TKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGA 288
           TK MR  GG + I++AIEKL  RH+EHI  YG  N+ RLTG+HETA +  F  GVANRG+
Sbjct: 255 TKEMRQPGGTKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETASMTAFSSGVANRGS 314

Query: 289 SIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTI 327
           SIR+ R   KEG GYFEDRRPASN+DPY+VT ++ ET  
Sbjct: 315 SIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVC 353


>pdb|2UU7|A Chain A, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|B Chain B, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|C Chain C, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|D Chain D, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|E Chain E, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|F Chain F, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|G Chain G, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|H Chain H, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|I Chain I, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|J Chain J, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|K Chain K, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|L Chain L, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|M Chain M, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|N Chain N, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
 pdb|2UU7|O Chain O, Crystal Structure Of Apo Glutamine Synthetase From Dog (
           Canis Familiaris)
          Length = 381

 Score =  297 bits (761), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 158/342 (46%), Positives = 207/342 (60%), Gaps = 34/342 (9%)

Query: 17  DKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQA 76
           +K+ A YIWI G+G  +R K RTL        +LP+WN+DGSST Q+ G +S++ L P A
Sbjct: 24  EKVQAMYIWIDGTGEGLRCKTRTLDSEPKGVEELPEWNFDGSSTFQSEGSNSDMYLVPAA 83

Query: 77  IFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVA-EEPWYGIEQEYTLL 135
           +F+DPFR+  N LV C+ +    +P  TN RH   +I    D+V+ + PW+G+EQEYTL+
Sbjct: 84  MFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIM---DMVSNQHPWFGMEQEYTLM 140

Query: 136 QKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMP 195
             D   P                    ADKA+GRDIV++HY+ACLYAGI I+G N EVMP
Sbjct: 141 GTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIAGTNAEVMP 199

Query: 196 GQ-------------------------RITEIAGVVLSFDPKPIQGDWNGAGAHANYSTK 230
            Q                         R+ E  GV+ +FDPKPI G+WNGAG H N+STK
Sbjct: 200 AQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTK 259

Query: 231 SMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVANR 286
           +MR + G + I+++IEKL  RH  HI AY    G  N RRLTG HET++IN F  GVANR
Sbjct: 260 AMREENGLKYIEESIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANR 319

Query: 287 GASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 328
           GASIR+ R   +E KGYFEDRRP++N DP+ VT  +  T +L
Sbjct: 320 GASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLL 361


>pdb|2OJW|A Chain A, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Phosphate
 pdb|2OJW|B Chain B, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Phosphate
 pdb|2OJW|C Chain C, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Phosphate
 pdb|2OJW|D Chain D, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Phosphate
 pdb|2OJW|E Chain E, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Phosphate
 pdb|2QC8|A Chain A, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Methionine Sulfoximine Phosphate
 pdb|2QC8|B Chain B, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Methionine Sulfoximine Phosphate
 pdb|2QC8|C Chain C, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Methionine Sulfoximine Phosphate
 pdb|2QC8|D Chain D, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Methionine Sulfoximine Phosphate
 pdb|2QC8|E Chain E, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Methionine Sulfoximine Phosphate
 pdb|2QC8|F Chain F, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Methionine Sulfoximine Phosphate
 pdb|2QC8|G Chain G, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Methionine Sulfoximine Phosphate
 pdb|2QC8|H Chain H, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Methionine Sulfoximine Phosphate
 pdb|2QC8|I Chain I, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Methionine Sulfoximine Phosphate
 pdb|2QC8|J Chain J, Crystal Structure Of Human Glutamine Synthetase In Complex
           With Adp And Methionine Sulfoximine Phosphate
          Length = 384

 Score =  295 bits (756), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 156/342 (45%), Positives = 206/342 (60%), Gaps = 34/342 (9%)

Query: 17  DKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQA 76
           +K+ A YIWI G+G  +R K RTL        +LP+WN+DGSST Q+ G +S++ L P A
Sbjct: 43  EKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAA 102

Query: 77  IFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVA-EEPWYGIEQEYTLL 135
           +F+DPFR+  N LV+C+ +     P  TN RH   +I    D+V+ + PW+G+EQEYTL+
Sbjct: 103 MFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIM---DMVSNQHPWFGMEQEYTLM 159

Query: 136 QKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMP 195
             D   P                    AD+A+GRDIV++HY+ACLYAG+ I+G N EVMP
Sbjct: 160 GTDGH-PFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMP 218

Query: 196 GQ-------------------------RITEIAGVVLSFDPKPIQGDWNGAGAHANYSTK 230
            Q                         R+ E  GV+ +FDPKPI G+WNGAG H N+STK
Sbjct: 219 AQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTK 278

Query: 231 SMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVANR 286
           +MR + G + I++AIEKL  RH  HI AY    G  N RRLTG HET++IN F  GVANR
Sbjct: 279 AMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANR 338

Query: 287 GASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 328
            ASIR+ R   +E KGYFEDRRP++N DP+ VT  +  T +L
Sbjct: 339 SASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLL 380


>pdb|2I33|A Chain A, The Structure Of The Class C Acid Phosphatase From
           Bacillus Anthracis
 pdb|2I33|B Chain B, The Structure Of The Class C Acid Phosphatase From
           Bacillus Anthracis
 pdb|2I34|A Chain A, The Crystal Structure Of Class C Acid Phosphatase From
           Bacillus Anthracis With Tungstate Bound
 pdb|2I34|B Chain B, The Crystal Structure Of Class C Acid Phosphatase From
           Bacillus Anthracis With Tungstate Bound
          Length = 258

 Score = 27.7 bits (60), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 8/75 (10%)

Query: 169 RDIVDSHYKACLYAGINIS---GINGEVMP--GQRITEIA---GVVLSFDPKPIQGDWNG 220
           R++V   +   L+ G N+S   G +G+ +    Q +T+     G      P P+ GDW G
Sbjct: 165 RELVSQTHDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDWEG 224

Query: 221 AGAHANYSTKSMRND 235
           A    N+       D
Sbjct: 225 ALYDYNFKKSDAEKD 239


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.315    0.135    0.417 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,038,878
Number of Sequences: 62578
Number of extensions: 436764
Number of successful extensions: 565
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 547
Number of HSP's gapped (non-prelim): 5
length of query: 331
length of database: 14,973,337
effective HSP length: 99
effective length of query: 232
effective length of database: 8,778,115
effective search space: 2036522680
effective search space used: 2036522680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.6 bits)