Query 020123
Match_columns 331
No_of_seqs 139 out of 1411
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 07:11:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020123.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020123hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1169 Diacylglycerol kinase 100.0 1.1E-48 2.3E-53 386.1 19.7 291 2-330 326-620 (634)
2 PRK13057 putative lipid kinase 100.0 3.3E-40 7.2E-45 308.8 20.9 222 2-329 53-283 (287)
3 TIGR03702 lip_kinase_YegS lipi 100.0 3E-40 6.4E-45 310.0 19.3 227 2-329 55-286 (293)
4 PRK13059 putative lipid kinase 100.0 2E-39 4.4E-44 304.6 19.8 224 2-330 59-292 (295)
5 PRK13054 lipid kinase; Reviewe 100.0 1E-38 2.2E-43 300.5 19.8 226 2-329 59-292 (300)
6 PRK11914 diacylglycerol kinase 100.0 3.6E-38 7.7E-43 297.6 20.5 227 2-329 67-302 (306)
7 PRK13055 putative lipid kinase 100.0 5.1E-38 1.1E-42 299.9 19.9 228 2-329 62-299 (334)
8 PRK13337 putative lipid kinase 100.0 6.4E-38 1.4E-42 295.7 19.8 224 2-329 60-292 (304)
9 PRK00861 putative lipid kinase 100.0 8E-38 1.7E-42 294.4 20.5 223 2-329 60-295 (300)
10 TIGR00147 lipid kinase, YegS/R 100.0 7E-37 1.5E-41 287.0 19.6 223 2-328 60-292 (293)
11 KOG0782 Predicted diacylglycer 100.0 7.2E-38 1.6E-42 300.8 11.1 272 1-322 418-689 (1004)
12 COG1597 LCB5 Sphingosine kinas 100.0 3E-36 6.5E-41 283.2 18.3 225 2-330 61-295 (301)
13 PLN02958 diacylglycerol kinase 100.0 4.6E-34 1E-38 283.7 19.6 249 2-328 171-463 (481)
14 PRK12361 hypothetical protein; 100.0 5.7E-33 1.2E-37 281.2 19.9 227 2-329 300-540 (547)
15 PF00609 DAGK_acc: Diacylglyce 100.0 8.4E-31 1.8E-35 225.2 8.4 160 126-303 1-161 (161)
16 PLN02204 diacylglycerol kinase 100.0 4.8E-28 1E-32 241.0 19.4 225 29-329 315-596 (601)
17 KOG1170 Diacylglycerol kinase 100.0 2.3E-29 5E-34 249.9 6.8 164 126-309 614-777 (1099)
18 smart00045 DAGKa Diacylglycero 99.9 3.7E-22 8.1E-27 171.3 10.8 159 126-303 1-160 (160)
19 KOG1116 Sphingosine kinase, in 99.8 1.6E-19 3.4E-24 177.4 12.8 250 3-330 240-566 (579)
20 PF00781 DAGK_cat: Diacylglyce 99.6 5.9E-16 1.3E-20 128.2 7.0 70 2-82 57-127 (130)
21 smart00046 DAGKc Diacylglycero 99.5 9.6E-15 2.1E-19 120.1 6.5 50 2-53 52-101 (124)
22 KOG1115 Ceramide kinase [Lipid 99.4 8.6E-13 1.9E-17 124.4 11.4 242 3-323 221-501 (516)
23 KOG4435 Predicted lipid kinase 98.3 1.1E-06 2.4E-11 83.5 5.3 121 2-169 119-243 (535)
24 PRK03378 ppnK inorganic polyph 97.9 0.00019 4E-09 67.5 12.6 56 2-75 66-122 (292)
25 PRK03708 ppnK inorganic polyph 97.6 0.00018 3.8E-09 67.2 7.8 57 2-76 60-116 (277)
26 PRK14075 pnk inorganic polypho 97.2 0.03 6.5E-07 51.7 17.3 42 278-329 194-235 (256)
27 PRK02645 ppnK inorganic polyph 96.7 0.0063 1.4E-07 57.7 7.9 66 2-83 60-126 (305)
28 PRK03501 ppnK inorganic polyph 96.0 0.72 1.6E-05 42.8 17.3 48 278-329 202-249 (264)
29 PF01513 NAD_kinase: ATP-NAD k 95.6 0.028 6.1E-07 52.6 6.4 65 2-83 79-143 (285)
30 COG3199 Predicted inorganic po 95.6 0.019 4.2E-07 54.4 5.1 55 2-72 103-157 (355)
31 PRK01231 ppnK inorganic polyph 95.5 0.078 1.7E-06 50.0 8.8 65 2-83 65-129 (295)
32 PRK02155 ppnK NAD(+)/NADH kina 95.1 0.12 2.6E-06 48.6 8.8 65 2-83 66-130 (291)
33 PRK01911 ppnK inorganic polyph 93.9 0.34 7.3E-06 45.7 8.8 65 2-83 67-131 (292)
34 PRK04539 ppnK inorganic polyph 93.6 0.32 7E-06 45.9 8.2 64 2-82 71-134 (296)
35 PRK03372 ppnK inorganic polyph 93.5 0.39 8.4E-06 45.5 8.6 60 2-78 75-134 (306)
36 PRK14077 pnk inorganic polypho 93.1 0.58 1.2E-05 44.0 9.0 63 2-81 67-129 (287)
37 PRK02649 ppnK inorganic polyph 92.7 0.63 1.4E-05 44.1 8.7 58 2-76 71-128 (305)
38 PLN02929 NADH kinase 91.9 0.96 2.1E-05 42.7 8.8 71 2-83 67-148 (301)
39 PRK02231 ppnK inorganic polyph 91.9 1.2 2.7E-05 41.4 9.4 48 278-329 204-252 (272)
40 PRK00561 ppnK inorganic polyph 91.4 1.5 3.2E-05 40.6 9.2 50 277-329 189-241 (259)
41 PLN02935 Bifunctional NADH kin 90.4 1.3 2.8E-05 44.6 8.4 58 2-76 265-322 (508)
42 PRK04885 ppnK inorganic polyph 89.8 2.1 4.5E-05 39.8 8.9 45 279-329 202-246 (265)
43 PRK04761 ppnK inorganic polyph 89.7 0.48 1E-05 43.5 4.5 32 2-40 28-59 (246)
44 PRK14076 pnk inorganic polypho 88.8 2.1 4.5E-05 44.2 8.8 58 2-76 351-408 (569)
45 COG0061 nadF NAD kinase [Coenz 86.1 5.3 0.00011 37.3 9.2 66 2-84 58-123 (281)
46 PLN02727 NAD kinase 82.7 3 6.4E-05 45.0 6.4 56 2-74 746-801 (986)
47 PRK01185 ppnK inorganic polyph 82.5 8 0.00017 36.0 8.6 45 279-329 207-252 (271)
48 PF10254 Pacs-1: PACS-1 cytoso 76.7 3 6.5E-05 41.0 3.9 49 1-50 77-128 (414)
49 KOG4180 Predicted kinase [Gene 64.2 4 8.6E-05 38.8 1.6 71 2-86 108-180 (395)
50 KOG2178 Predicted sugar kinase 61.9 9.5 0.00021 37.2 3.8 56 2-74 171-226 (409)
51 PF12219 End_tail_spike: Catal 48.4 10 0.00022 31.4 1.4 12 2-13 87-98 (160)
52 PTZ00286 6-phospho-1-fructokin 48.0 39 0.00084 34.0 5.7 48 2-51 179-229 (459)
53 TIGR02483 PFK_mixed phosphofru 43.6 38 0.00083 32.4 4.7 41 2-50 97-140 (324)
54 PLN02564 6-phosphofructokinase 39.9 53 0.0011 33.3 5.2 47 2-50 179-228 (484)
55 PRK06830 diphosphate--fructose 39.5 54 0.0012 32.8 5.2 48 2-51 175-225 (443)
56 cd00763 Bacterial_PFK Phosphof 36.8 62 0.0013 30.9 5.0 36 2-45 95-130 (317)
57 TIGR02482 PFKA_ATP 6-phosphofr 33.8 80 0.0017 29.9 5.1 38 2-46 94-131 (301)
58 PRK00536 speE spermidine synth 31.8 32 0.00069 31.9 2.1 16 2-17 76-92 (262)
59 PRK14072 6-phosphofructokinase 31.0 98 0.0021 30.7 5.5 47 2-50 106-155 (416)
60 cd00363 PFK Phosphofructokinas 30.9 88 0.0019 30.1 5.0 41 2-45 95-136 (338)
61 COG1691 NCAIR mutase (PurE)-re 30.9 50 0.0011 30.0 3.0 31 2-41 176-206 (254)
62 PRK14071 6-phosphofructokinase 28.3 1.1E+02 0.0024 29.7 5.2 43 2-51 110-155 (360)
63 PLN02884 6-phosphofructokinase 26.7 1.2E+02 0.0026 30.1 5.2 47 2-50 146-195 (411)
64 PF00365 PFK: Phosphofructokin 23.7 52 0.0011 30.8 2.0 38 2-46 95-132 (282)
65 PF12124 Nsp3_PL2pro: Coronavi 23.7 78 0.0017 21.8 2.3 25 278-305 33-57 (66)
66 TIGR02478 6PF1K_euk 6-phosphof 23.2 1.2E+02 0.0026 32.6 4.7 43 2-45 481-523 (745)
67 PRK06555 pyrophosphate--fructo 21.9 1.4E+02 0.003 29.5 4.6 41 2-45 115-156 (403)
68 COG1013 PorB Pyruvate:ferredox 21.6 98 0.0021 29.2 3.4 34 2-39 90-124 (294)
69 TIGR00725 conserved hypothetic 21.3 1.2E+02 0.0026 25.7 3.6 28 2-37 95-122 (159)
70 cd01836 FeeA_FeeB_like SGNH_hy 20.9 2.7E+02 0.0059 23.3 5.9 58 3-71 45-102 (191)
71 PF08308 PEGA: PEGA domain; I 20.8 1.6E+02 0.0035 20.7 3.8 16 293-308 11-26 (71)
72 PRK03202 6-phosphofructokinase 20.6 3.1E+02 0.0066 26.2 6.5 37 2-46 96-132 (320)
73 PRK11866 2-oxoacid ferredoxin 20.5 81 0.0018 29.5 2.6 21 2-22 79-100 (279)
No 1
>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-48 Score=386.09 Aligned_cols=291 Identities=41% Similarity=0.758 Sum_probs=237.1
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
||+|||||||+.||++.+-..++++....+|+||+|+|||||+||.|+|+.+++.++.. +.++++.+..+.+.++|.|+
T Consensus 326 riLVcGGDGTvGWVL~~i~~~n~~~~~~~PpVAilPLGTGNDLsR~l~WGgg~~g~~~~-~~~iL~~i~~a~v~~lDrW~ 404 (634)
T KOG1169|consen 326 RILVCGGDGTVGWVLGCIDKLNKQNAIPPPPVAILPLGTGNDLSRVLRWGGGYPGEDRN-LIKILKDIEEAPVTKLDRWK 404 (634)
T ss_pred eEEEecCCCcchhhhhhHHHhhccccCCCCCeEEEecCCCCchHhhcCCCCCCCcchhh-HHHHHHhhhhccceecceee
Confidence 89999999999999999987655444568899999999999999999999999887655 77888899999999999999
Q ss_pred EEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccCCCcc
Q 020123 82 AVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNK 161 (331)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k 161 (331)
|.+..++++.. +.+.++. + .++ +....+|.||||||+||.|+++|+..|+++|++|.+|+.||
T Consensus 405 v~v~~~~~~~~--~~~~~~~-----~-----~~~-----~~~~~imnNYFSIGvDA~Ia~~FH~~Re~~PekF~Sr~~NK 467 (634)
T KOG1169|consen 405 VLVEPQSGELV--QYSLKPP-----E-----KGD-----PVPYGIMNNYFSIGVDAQIAYGFHNMREKNPEKFNSRMKNK 467 (634)
T ss_pred EEeeccccccc--cccccCC-----C-----cCC-----CCCeeeEeeeeeecccHHHHHHHHHHhhhChHhhcchhhce
Confidence 99876665433 2222221 0 001 12357999999999999999999999999999999999999
Q ss_pred ccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhcc
Q 020123 162 LIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKK 241 (331)
Q Consensus 162 ~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~~ 241 (331)
++|+..+.+.. ++.+|.. + ....++. .+ .+|+.++++.++..|++.|++|||||.+||++..+++....
T Consensus 468 l~Yf~~G~q~~-f~~~ck~------~--~~~i~i~-~~-~d~~dl~~p~sleGIv~LNIpS~ggG~nlWg~~~~~~~~~~ 536 (634)
T KOG1169|consen 468 LWYFEFGTQET-FAARCKN------L--HLHIKIE-LD-GDGEDLELPKSLEGIVVLNIPSWGGGSNLWGNSNKSKGNFR 536 (634)
T ss_pred eeeeeecchhh-HHHhhcC------C--ccceEEE-Ec-ccceEccCCCCceeEEEEcccccccCcccccccCccccccc
Confidence 99999986553 3344421 1 1223332 22 46788888888999999999999999999998888777777
Q ss_pred CcccccCCCCeEEEEEecchhhHHHHHHhhcccceeee---ec-EEEEEEcCCcceeceEEecCccccCCCCCCCceEEE
Q 020123 242 GFVEAHADDGLLEIFGLKQGWHASFVMVELISAKHIAQ---AA-AIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVE 317 (331)
Q Consensus 242 ~~~~a~~~DG~Lev~~~~~~~~~~~~~~~l~~g~~l~q---~~-~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~~~~~~~ 317 (331)
++.++.-+||++|++.+++.+|..+++.+|.++.|+.| .+ +++|... ++.|+|||||+|.|+|+. |+
T Consensus 537 ~~~~~d~~dgliEvvgv~~~~h~~~~qvgL~~a~rigQ~~a~~~~~~i~~~----k~~PMQiDGEPW~Q~p~t-----I~ 607 (634)
T KOG1169|consen 537 GFSEADDDDGLIEVVGVQDSWHLLQEQVGLESALRIGQRLAQCSERVIGTK----KTFPMQIDGEPWMQPPCT-----IE 607 (634)
T ss_pred cccccCCCcCeEEEEEeccchhhhhhhhccchhhHHHHHhhccEEEEeccc----cCcceecCCccccCCCce-----EE
Confidence 77888888999999999999999999999999999986 33 3335554 899999999999999963 99
Q ss_pred EEeeccccccccC
Q 020123 318 IKRVPFQSLMISG 330 (331)
Q Consensus 318 i~~~p~~~~~~~~ 330 (331)
|+..+++..|++.
T Consensus 608 Ithk~q~~mL~~~ 620 (634)
T KOG1169|consen 608 ITHKNQAPMLMKA 620 (634)
T ss_pred EEecchHhhhhcc
Confidence 9999999988765
No 2
>PRK13057 putative lipid kinase; Reviewed
Probab=100.00 E-value=3.3e-40 Score=308.81 Aligned_cols=222 Identities=22% Similarity=0.279 Sum_probs=172.8
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
+||++|||||||+|+|++.. .++|||+||+||+|||||+||++. ++.+++ +.|.+++.+++|+++
T Consensus 53 ~iiv~GGDGTv~~v~~~l~~-------~~~~lgiiP~GT~Ndfar~Lg~~~----~~~~a~----~~i~~~~~~~vD~g~ 117 (287)
T PRK13057 53 LVIVGGGDGTLNAAAPALVE-------TGLPLGILPLGTANDLARTLGIPL----DLEAAA----RVIATGQVRRIDLGW 117 (287)
T ss_pred EEEEECchHHHHHHHHHHhc-------CCCcEEEECCCCccHHHHHcCCCC----CHHHHH----HHHHcCCeEEeeEEE
Confidence 58999999999999999975 468999999999999999999964 455554 456779999999997
Q ss_pred EEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccCCCcc
Q 020123 82 AVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNK 161 (331)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k 161 (331)
+ +++||+|++|+||||.|++.++..+ | .++ |+
T Consensus 118 ~----------------------------------------~~~~f~n~~g~G~da~v~~~~~~~~--k-----~~~-G~ 149 (287)
T PRK13057 118 V----------------------------------------NGHYFFNVASLGLSAELARRLTKEL--K-----RRW-GT 149 (287)
T ss_pred E----------------------------------------CCEEEEEEEecCccHHHHHHhhHHh--h-----ccC-Ch
Confidence 5 2579999999999999999887533 1 234 89
Q ss_pred ccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhcc
Q 020123 162 LIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKK 241 (331)
Q Consensus 162 ~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~~ 241 (331)
++|++.+++.++... .+++++. ++ ++.++ .++.+++++|++|||||+. ++|
T Consensus 150 ~aY~~~~~~~l~~~~-------------~~~~~l~-~d---~~~~~--~~~~~~~v~N~~~~gg~~~----~~p------ 200 (287)
T PRK13057 150 LGYAIAALRVLRRSR-------------PFTAEIE-HD---GRTER--VKTLQVAVGNGRYYGGGMT----VAH------ 200 (287)
T ss_pred hHHHHHHHHHHhhCC-------------CeEEEEE-EC---CEEEE--EEEEEEEEecCcccCCCcc----cCC------
Confidence 999998887654332 1334433 22 34443 2578889999999999998 464
Q ss_pred CcccccCCCCeEEEEEecchhhHHH--HHHhhccc-------ceeeeecEEEEEEcCCcceeceEEecCccccCCCCCCC
Q 020123 242 GFVEAHADDGLLEIFGLKQGWHASF--VMVELISA-------KHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDY 312 (331)
Q Consensus 242 ~~~~a~~~DG~Lev~~~~~~~~~~~--~~~~l~~g-------~~l~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~~ 312 (331)
+++++||+||+++++....+.+ ++..+..| .+..++++++|+++ +++++|+|||.+...
T Consensus 201 ---~a~~~DG~ldv~~v~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~~~i~~~----~~~~~~~DGE~~~~~----- 268 (287)
T PRK13057 201 ---DATIDDGRLDLYSLEVAHWWRLLALLPALRRGRHGEWPDVRAFRTTELELRTR----KPRPINTDGELTTYT----- 268 (287)
T ss_pred ---CCCCCCceEEEEEecCCCHHHHHHHHHHHhcCCccCCCcEEEEEeeEEEEEeC----CCcEEeeCCccCCCC-----
Confidence 9999999999999988655443 23334333 34578999999986 789999999997643
Q ss_pred ceEEEEEeecccccccc
Q 020123 313 STFVEIKRVPFQSLMIS 329 (331)
Q Consensus 313 ~~~~~i~~~p~~~~~~~ 329 (331)
+++|++.|.++.++.
T Consensus 269 --p~~i~v~p~al~v~~ 283 (287)
T PRK13057 269 --PAHFRVLPKALRVLA 283 (287)
T ss_pred --CEEEEEECCeEEEEc
Confidence 599999999998875
No 3
>TIGR03702 lip_kinase_YegS lipid kinase YegS. Members of this protein family are designated YegS, an apparent lipid kinase family in the Proteobacteria. Bakali, et al. report phosphatidylglycerol kinase activity for the member from Escherichia coli, but refrain from calling that activity synonymous with its biological role. Note that a broader, subfamily-type model (TIGR00147), includes this family but also multiple paralogs in some species and varied functions.
Probab=100.00 E-value=3e-40 Score=310.01 Aligned_cols=227 Identities=21% Similarity=0.212 Sum_probs=170.6
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
+||++|||||||+|+|+|..... ...+|||+||.||||||||+||++. ++.++++ .+.+|+++++|++.
T Consensus 55 ~vv~~GGDGTi~ev~ngl~~~~~---~~~~~lgiiP~GTgNdfAr~l~ip~----~~~~a~~----~i~~g~~~~iDlg~ 123 (293)
T TIGR03702 55 TVIAGGGDGTLREVATALAQIRD---DAAPALGLLPLGTANDFATAAGIPL----EPAKALK----LALNGAAQPIDLAR 123 (293)
T ss_pred EEEEEcCChHHHHHHHHHHhhCC---CCCCcEEEEcCCchhHHHHhcCCCC----CHHHHHH----HHHhCCceeeeEEE
Confidence 58999999999999999975321 2356899999999999999999965 4555554 46679999999987
Q ss_pred EEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccCCCcc
Q 020123 82 AVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNK 161 (331)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k 161 (331)
++ ..++|+|++|+||||+|++.+++.. | .++ |+
T Consensus 124 v~---------------------------------------~~~~f~n~~~~G~da~v~~~~~~~~--k-----~~~-G~ 156 (293)
T TIGR03702 124 VN---------------------------------------GKHYFLNMATGGFGTRVTTETSEKL--K-----KAL-GG 156 (293)
T ss_pred EC---------------------------------------CccEEEEEeecccchHhhhhhhHHH--H-----hcc-ch
Confidence 52 1369999999999999999887532 1 223 89
Q ss_pred ccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhcc
Q 020123 162 LIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKK 241 (331)
Q Consensus 162 ~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~~ 241 (331)
++|+..+++.++..+ .++++ ++.+ ++.+ ..++.+++|+|++|||||+. ++|
T Consensus 157 ~aY~~~~l~~l~~~~-------------~~~~~---i~~~-~~~~--~~~~~~~~v~N~~~~GGg~~----i~P------ 207 (293)
T TIGR03702 157 AAYLITGLTRFSELT-------------AASCE---FRGP-DFHW--EGDFLALGIGNGRQAGGGQV----LCP------ 207 (293)
T ss_pred HHHHHHHHHHHhhCC-------------CeEEE---EEEC-CEEE--EeeEEEEEEECCCcCCCCce----eCC------
Confidence 999999887754322 12333 3332 2322 34688999999999999998 564
Q ss_pred CcccccCCCCeEEEEEecchhhHHHHHHhhcccc---ee--eeecEEEEEEcCCcceeceEEecCccccCCCCCCCceEE
Q 020123 242 GFVEAHADDGLLEIFGLKQGWHASFVMVELISAK---HI--AQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFV 316 (331)
Q Consensus 242 ~~~~a~~~DG~Lev~~~~~~~~~~~~~~~l~~g~---~l--~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~~~~~~ 316 (331)
+|+++||+||+++++..+.+..++..+++|. ++ .++++++|+.+ +++++|+|||.+.. +++
T Consensus 208 ---~A~~~DG~Ldv~~v~~~~~~~~~l~~~~~g~~~~~~~~~~~~~i~i~~~----~~~~~~vDGE~~~~-------~p~ 273 (293)
T TIGR03702 208 ---DALINDGLLDVRILPAPELLPATLSTLFGGDKNPEFVRARLPWLEIEAP----QPLTFNLDGEPLSG-------RHF 273 (293)
T ss_pred ---CCccCCceEEEEEeCCHHHHHHHHHHHhcCCCCCcEEEEEcCEEEEEeC----CCcEEEECCCcCCC-------ceE
Confidence 9999999999999988433322334444442 23 35678999876 78999999999763 469
Q ss_pred EEEeecccccccc
Q 020123 317 EIKRVPFQSLMIS 329 (331)
Q Consensus 317 ~i~~~p~~~~~~~ 329 (331)
+|++.|.++.++.
T Consensus 274 ~i~v~p~al~v~~ 286 (293)
T TIGR03702 274 RIEVLPGALRCHL 286 (293)
T ss_pred EEEEEcCeEEEEc
Confidence 9999999999875
No 4
>PRK13059 putative lipid kinase; Reviewed
Probab=100.00 E-value=2e-39 Score=304.61 Aligned_cols=224 Identities=21% Similarity=0.252 Sum_probs=172.0
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.||++|||||||+|+|+|++. ..++|||+||+||||||||+||++. ++.+|++ .|..|+.+++|+++
T Consensus 59 ~vi~~GGDGTv~evv~gl~~~-----~~~~~lgviP~GTgNdfAr~lgi~~----~~~~a~~----~i~~g~~~~vDlg~ 125 (295)
T PRK13059 59 YILIAGGDGTVDNVVNAMKKL-----NIDLPIGILPVGTANDFAKFLGMPT----DIGEACE----QILKSKPKKVDLGK 125 (295)
T ss_pred EEEEECCccHHHHHHHHHHhc-----CCCCcEEEECCCCHhHHHHHhCCCC----CHHHHHH----HHHhCCcEEeeEEE
Confidence 589999999999999999853 2468999999999999999999964 5666655 46679999999997
Q ss_pred EEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccCCCcc
Q 020123 82 AVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNK 161 (331)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k 161 (331)
+ ++++|+|++|+||||+|++.++... | .++ |+
T Consensus 126 v----------------------------------------~~~~f~n~~~~G~~a~v~~~~~~~~--k-----~~~-G~ 157 (295)
T PRK13059 126 I----------------------------------------NDKYFINVASTGLFTDVSQKTDVNL--K-----NTI-GK 157 (295)
T ss_pred E----------------------------------------CCEEEEEEEeeeechhhhhhccHHH--h-----hCc-ch
Confidence 5 2579999999999999999886432 1 223 88
Q ss_pred ccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhcc
Q 020123 162 LIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKK 241 (331)
Q Consensus 162 ~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~~ 241 (331)
++|+..+++.++..++ .+++++ + |++.++ .++.+++|+|++|||| +. ++|
T Consensus 158 ~aY~~~~~~~l~~~~~-------------~~~~i~-~---d~~~~~--~~~~~~~v~N~~~~Gg-~~----~~p------ 207 (295)
T PRK13059 158 LAYYLKGLEELPNFRK-------------LKVKVT-S---EEVNFD--GDMYLMLVFNGQTAGN-FN----LAY------ 207 (295)
T ss_pred HHHHHHHHHHHhcCCC-------------eeEEEE-E---CCEEEE--eeEEEEEEEcCccccC-cc----cCC------
Confidence 9999988887543321 334443 2 234442 4688899999998875 55 564
Q ss_pred CcccccCCCCeEEEEEecchhhHHHH--HHhhccc--------ceeeeecEEEEEEcCCcceeceEEecCccccCCCCCC
Q 020123 242 GFVEAHADDGLLEIFGLKQGWHASFV--MVELISA--------KHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRD 311 (331)
Q Consensus 242 ~~~~a~~~DG~Lev~~~~~~~~~~~~--~~~l~~g--------~~l~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~ 311 (331)
+|+++||+||++++++.+.+.++ +..+..| .+..++++++|+.. +++++|+|||+....
T Consensus 208 ---~a~~~DG~Ldv~i~~~~~~~~~l~~~~~~~~G~~~~~~~~v~~~~~~~i~i~~~----~~~~~~~DGE~~~~~---- 276 (295)
T PRK13059 208 ---KAEVDDGLLDVIIIKACPIIDLIPLFIKVLKGEHLEDVNGLIYFKTDKLEIESN----EEIVTDIDGERGPDF---- 276 (295)
T ss_pred ---cccCCCCeEEEEEEcCCCHHHHHHHHHHHHcCCccCCCccEEEEEeeEEEEEeC----CCceEEeCCCcCCCC----
Confidence 99999999999999997666543 3334333 34457889999886 689999999997543
Q ss_pred CceEEEEEeeccccccccC
Q 020123 312 YSTFVEIKRVPFQSLMISG 330 (331)
Q Consensus 312 ~~~~~~i~~~p~~~~~~~~ 330 (331)
+++|++.|.++.++..
T Consensus 277 ---p~~i~v~p~al~v~~p 292 (295)
T PRK13059 277 ---PLNIECIKGGLKVLGI 292 (295)
T ss_pred ---cEEEEEecCeeEEEec
Confidence 5999999999988753
No 5
>PRK13054 lipid kinase; Reviewed
Probab=100.00 E-value=1e-38 Score=300.52 Aligned_cols=226 Identities=21% Similarity=0.225 Sum_probs=169.7
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.||++|||||||+|+|+|..... ..++|||+||.||||||||+||++. +|.+|++ .|..|+++++|+++
T Consensus 59 ~vvv~GGDGTl~evv~~l~~~~~---~~~~~lgiiP~GTgNdfar~lgi~~----~~~~a~~----~i~~g~~~~iDlg~ 127 (300)
T PRK13054 59 TVIAGGGDGTINEVATALAQLEG---DARPALGILPLGTANDFATAAGIPL----EPDKALK----LAIEGRAQPIDLAR 127 (300)
T ss_pred EEEEECCccHHHHHHHHHHhhcc---CCCCcEEEEeCCcHhHHHHhcCCCC----CHHHHHH----HHHhCCceEEEEEE
Confidence 58999999999999999985311 2468999999999999999999964 5655554 46679999999997
Q ss_pred EEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccc-eEeeeeecchhHHHhhhhhhccccCCCccccCCCc
Q 020123 82 AVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEG-VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISN 160 (331)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~ 160 (331)
++ ++ +|+|++|+||||+|++..++.. | .++ |
T Consensus 128 v~----------------------------------------~~~~f~n~~~~G~~a~v~~~~~~~~--k-----~~~-G 159 (300)
T PRK13054 128 VN----------------------------------------DRTYFINMATGGFGTRVTTETPEKL--K-----AAL-G 159 (300)
T ss_pred Ec----------------------------------------CceEEEEEeecchhHHHHHhhHHHH--H-----hcc-c
Confidence 52 34 9999999999999998876532 1 233 8
Q ss_pred cccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhc
Q 020123 161 KLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEK 240 (331)
Q Consensus 161 k~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~ 240 (331)
+++|...+++.++..+ .+++++ +.+ ++.+ +.++.++.|+|++|||||+. ++|
T Consensus 160 ~~~Y~~~~l~~l~~~~-------------~~~~~i---~~d-~~~~--~~~~~~~~v~N~~~~ggg~~----~~p----- 211 (300)
T PRK13054 160 GVAYLIHGLMRMDTLK-------------PDRCEI---RGP-DFHW--QGDALVIGIGNGRQAGGGQQ----LCP----- 211 (300)
T ss_pred hHHHHHHHHHHHhhCC-------------CeEEEE---EeC-CcEE--EeeEEEEEEECCCcCCCCcc----cCC-----
Confidence 8999998887654332 133443 332 2333 24689999999999999998 564
Q ss_pred cCcccccCCCCeEEEEEecchhhHHHHHHhhccc-------ceeeeecEEEEEEcCCcceeceEEecCccccCCCCCCCc
Q 020123 241 KGFVEAHADDGLLEIFGLKQGWHASFVMVELISA-------KHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYS 313 (331)
Q Consensus 241 ~~~~~a~~~DG~Lev~~~~~~~~~~~~~~~l~~g-------~~l~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~~~ 313 (331)
+|+++||+||++++++...+...+..+..+ .+..++++++|+.. +++++|+|||+...
T Consensus 212 ----~a~~~DG~ldv~~~~~~~~~l~~l~~~~~g~~~~~~~v~~~~~~~v~i~~~----~~~~~~iDGE~~~~------- 276 (300)
T PRK13054 212 ----EALINDGLLDLRILPAPQELLPTLLSTLTGGSEDNPNIIRARLPWLEIQAP----HELTFNLDGEPLSG------- 276 (300)
T ss_pred ----CCcCCCCeEEEEEECCHHHHHHHHHHHHhCCCCCCCcEEEEECCEEEEEcC----CCCEEEeCCCcCCC-------
Confidence 999999999999998811111122222222 24468899999975 78999999999763
Q ss_pred eEEEEEeecccccccc
Q 020123 314 TFVEIKRVPFQSLMIS 329 (331)
Q Consensus 314 ~~~~i~~~p~~~~~~~ 329 (331)
++++|++.|.+..++.
T Consensus 277 ~p~~i~v~p~al~vl~ 292 (300)
T PRK13054 277 RHFRIEVLPAALRCRL 292 (300)
T ss_pred ccEEEEEEcCeeEEEe
Confidence 3599999999998875
No 6
>PRK11914 diacylglycerol kinase; Reviewed
Probab=100.00 E-value=3.6e-38 Score=297.61 Aligned_cols=227 Identities=23% Similarity=0.262 Sum_probs=171.7
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
+||++|||||||+|+|+|.. .++|||+||.||+|||||+||++.+ ++.+++ +.+.+|+++++|+++
T Consensus 67 ~vvv~GGDGTi~evv~~l~~-------~~~~lgiiP~GT~NdfAr~lg~~~~---~~~~a~----~~i~~g~~~~iDlg~ 132 (306)
T PRK11914 67 ALVVVGGDGVISNALQVLAG-------TDIPLGIIPAGTGNDHAREFGIPTG---DPEAAA----DVIVDGWTETVDLGR 132 (306)
T ss_pred EEEEECCchHHHHHhHHhcc-------CCCcEEEEeCCCcchhHHHcCCCCC---CHHHHH----HHHHcCCceEEEEEE
Confidence 58999999999999999974 5689999999999999999999642 354444 456779999999999
Q ss_pred EEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccCCCcc
Q 020123 82 AVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNK 161 (331)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k 161 (331)
|+... ...++|+|++|+||||.|+...++.| .++ ++
T Consensus 133 v~~~~-----------------------------------~~~~~f~n~~~~G~~a~v~~~~~~~k--------~~~-G~ 168 (306)
T PRK11914 133 IQDDD-----------------------------------GIVKWFGTVAATGFDSLVTDRANRMR--------WPH-GR 168 (306)
T ss_pred EecCC-----------------------------------CCcEEEEEEEeeehHHHHHHHHHhcc--------ccC-Cc
Confidence 75310 02479999999999999998876532 123 88
Q ss_pred ccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhcc
Q 020123 162 LIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKK 241 (331)
Q Consensus 162 ~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~~ 241 (331)
++|.+.+++.++..+ .++++++ ++ +.+.++ .++.++.|+|+++||||+. ++|
T Consensus 169 ~aY~~~~l~~l~~~~-------------~~~~~i~-~d--g~~~~~--~~~~~~~v~N~~~~GG~~~----~~p------ 220 (306)
T PRK11914 169 MRYNLAMLAELSKLR-------------PLPFRLV-LD--GTEEIV--TDLTLAAFGNTRSYGGGML----ICP------ 220 (306)
T ss_pred hhhHHHHHHHHHhcC-------------CCcEEEE-Ee--CCeEEE--eeEEEEEEeCcccccCCce----eCC------
Confidence 999998887654322 1334443 33 213332 4688999999999999998 564
Q ss_pred CcccccCCCCeEEEEEecchhhHHHH--HHhhcccce-------eeeecEEEEEEcCCcceeceEEecCccccCCCCCCC
Q 020123 242 GFVEAHADDGLLEIFGLKQGWHASFV--MVELISAKH-------IAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDY 312 (331)
Q Consensus 242 ~~~~a~~~DG~Lev~~~~~~~~~~~~--~~~l~~g~~-------l~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~~ 312 (331)
+|+++||+||+++++..+.+.++ +..+..|+| ..++++++|+++ ++++++|||+....
T Consensus 221 ---~a~~~DG~ldv~~v~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~i~i~~~-----~~~~~~DGE~~~~~----- 287 (306)
T PRK11914 221 ---NADHTDGLLDITMVQSASRTRLLRLFPTVFKGTHVELDEVSTARAKTVHVECP-----GINAYADGDFACPL----- 287 (306)
T ss_pred ---CCcCCCCcEEEEEEecCCHHHHHHHHHHhcCCcccCCCcEEEEEeEEEEEEcC-----CcceecCCCcCCCC-----
Confidence 99999999999999886555443 334444543 357889999874 36899999997533
Q ss_pred ceEEEEEeecccccccc
Q 020123 313 STFVEIKRVPFQSLMIS 329 (331)
Q Consensus 313 ~~~~~i~~~p~~~~~~~ 329 (331)
+++|+++|.++.++.
T Consensus 288 --p~~i~v~p~al~v~v 302 (306)
T PRK11914 288 --PAEISAVPGALQILR 302 (306)
T ss_pred --ceEEEEEcCeEEEEC
Confidence 599999999998875
No 7
>PRK13055 putative lipid kinase; Reviewed
Probab=100.00 E-value=5.1e-38 Score=299.92 Aligned_cols=228 Identities=19% Similarity=0.232 Sum_probs=172.6
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
+||++|||||||+|+|+|... ..++||||||+||||||||+||++.+ ++.++++ .+.+++.+++|++.
T Consensus 62 ~vvv~GGDGTl~evvngl~~~-----~~~~~LgiiP~GTgNdfAr~Lgi~~~---~~~~a~~----~l~~g~~~~vD~g~ 129 (334)
T PRK13055 62 LIIAAGGDGTINEVVNGIAPL-----EKRPKMAIIPAGTTNDYARALKIPRD---NPVEAAK----VILKNQTIKMDIGR 129 (334)
T ss_pred EEEEECCCCHHHHHHHHHhhc-----CCCCcEEEECCCchhHHHHHcCCCCc---CHHHHHH----HHHcCCcEEeeEEE
Confidence 589999999999999999853 24689999999999999999999641 4555554 46679999999997
Q ss_pred EEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccCCCcc
Q 020123 82 AVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNK 161 (331)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k 161 (331)
++ +++||+|++|+||||+|+...+..+ + .++ |+
T Consensus 130 v~---------------------------------------~~~~F~n~ag~G~da~v~~~~~~~~-k------~~~-G~ 162 (334)
T PRK13055 130 AN---------------------------------------EDKYFINIAAGGSLTELTYSVPSQL-K------SMF-GY 162 (334)
T ss_pred EC---------------------------------------CCcEEEEEehhccchHHHHhcCHHH-H------hhc-cH
Confidence 52 2579999999999999998876543 1 234 89
Q ss_pred ccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhcc
Q 020123 162 LIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKK 241 (331)
Q Consensus 162 ~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~~ 241 (331)
++|+..+++.++..++ .+++++ ++ ++.. ..++.+++++|+++|||++. ++|
T Consensus 163 laY~~~~~~~l~~~~~-------------~~~~i~-~d---~~~~--~~~~~~~~v~n~~~~Gg~~~----~~p------ 213 (334)
T PRK13055 163 LAYLAKGAELLPRVSP-------------VPVRIT-YD---EGVF--EGKISMFFLALTNSVGGFEQ----IVP------ 213 (334)
T ss_pred HHHHHHHHHHHHhcCC-------------eeEEEE-EC---CEEE--EEEEEEEEEEcCcccCCccc----cCC------
Confidence 9999988876543321 334433 32 2333 23678889999999999987 564
Q ss_pred CcccccCCCCeEEEEEecchhhHHHH--HHhhcc-cc-------eeeeecEEEEEEcCCcceeceEEecCccccCCCCCC
Q 020123 242 GFVEAHADDGLLEIFGLKQGWHASFV--MVELIS-AK-------HIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRD 311 (331)
Q Consensus 242 ~~~~a~~~DG~Lev~~~~~~~~~~~~--~~~l~~-g~-------~l~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~ 311 (331)
+|+++||+||++++++...+.++ +..+.. |+ +..++++++|++.. .+++++|+|||+...
T Consensus 214 ---~a~~~DG~ldv~i~~~~~~~~~l~~~~~~~~~G~~~~~~~v~~~~~~~i~I~~~~--~~~~~~~iDGE~~~~----- 283 (334)
T PRK13055 214 ---DAKLDDGKFTLIIVKTANLFELLHLMALILNGGKHIDDPRVIYIKTSKLTIEPLG--DDRLMVNLDGEYGGD----- 283 (334)
T ss_pred ---CCcCCCceEEEEEEcCCCHHHHHHHHHHHHhCCCCCCCCcEEEEEccEEEEEeCC--CCcceEeeCCCcCCC-----
Confidence 99999999999999986554443 333334 43 34578999998752 146899999999763
Q ss_pred CceEEEEEeecccccccc
Q 020123 312 YSTFVEIKRVPFQSLMIS 329 (331)
Q Consensus 312 ~~~~~~i~~~p~~~~~~~ 329 (331)
++++|++.|.++.++.
T Consensus 284 --~pv~i~v~p~al~v~~ 299 (334)
T PRK13055 284 --APMTFENLKQHIEFFA 299 (334)
T ss_pred --CcEEEEEEcCeEEEEe
Confidence 3599999999999876
No 8
>PRK13337 putative lipid kinase; Reviewed
Probab=100.00 E-value=6.4e-38 Score=295.67 Aligned_cols=224 Identities=20% Similarity=0.221 Sum_probs=171.7
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.||++|||||||+|+|+|... ..++|||+||.||||||||+||++. ++.+|++ .+.+|..+++|+++
T Consensus 60 ~vvv~GGDGTl~~vv~gl~~~-----~~~~~lgiiP~GT~NdfAr~lgi~~----~~~~a~~----~i~~g~~~~vDlg~ 126 (304)
T PRK13337 60 LVIAAGGDGTLNEVVNGIAEK-----ENRPKLGIIPVGTTNDFARALHVPR----DIEKAAD----VIIEGHTVPVDIGK 126 (304)
T ss_pred EEEEEcCCCHHHHHHHHHhhC-----CCCCcEEEECCcCHhHHHHHcCCCC----CHHHHHH----HHHcCCeEEEEEEE
Confidence 589999999999999999853 2468999999999999999999965 4555554 56679999999987
Q ss_pred EEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccCCCcc
Q 020123 82 AVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNK 161 (331)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k 161 (331)
+ ++++|+|++|+|+||.+++.++... | .++ |+
T Consensus 127 v----------------------------------------n~~~fln~~g~G~~a~v~~~~~~~~--k-----~~~-G~ 158 (304)
T PRK13337 127 A----------------------------------------NNRYFINIAGGGRLTELTYEVPSKL--K-----TML-GQ 158 (304)
T ss_pred E----------------------------------------CCEEEEeeehhhHHHHHHHhcCHHH--h-----cCc-cc
Confidence 5 2579999999999999998876422 1 233 88
Q ss_pred ccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhcc
Q 020123 162 LIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKK 241 (331)
Q Consensus 162 ~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~~ 241 (331)
++|.+.+++.++..+ .++++++ + |++..+ .++.+++++|+++|||++. ++|
T Consensus 159 ~aY~~~~~~~l~~~~-------------~~~~~i~-~---d~~~~~--~~~~~~~v~n~~~~gg~~~----~~p------ 209 (304)
T PRK13337 159 LAYYLKGIEMLPSLK-------------ATDVRIE-Y---DGKLFQ--GEIMLFLLGLTNSVGGFEK----LAP------ 209 (304)
T ss_pred HHHHHHHHHHHhhCC-------------CceEEEE-E---CCeEEE--eEEEEEEEEcCcccCCccc----cCC------
Confidence 999988776543221 1334433 2 334332 3678899999999999987 564
Q ss_pred CcccccCCCCeEEEEEecchhhHHH--HHHhhcccc-------eeeeecEEEEEEcCCcceeceEEecCccccCCCCCCC
Q 020123 242 GFVEAHADDGLLEIFGLKQGWHASF--VMVELISAK-------HIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDY 312 (331)
Q Consensus 242 ~~~~a~~~DG~Lev~~~~~~~~~~~--~~~~l~~g~-------~l~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~~ 312 (331)
+++++||+||+++++..+.+.+ ++..+..|+ +..++++++|+.+ +++++|+|||....
T Consensus 210 ---~a~~~DG~ldv~iv~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~~~i~~~----~~~~~~iDGE~~~~------ 276 (304)
T PRK13337 210 ---DASLDDGYFDLIIVKKANLAELIHIATLALRGEHIKHPKVIYTKANRIKVSSF----DKMQLNLDGEYGGK------ 276 (304)
T ss_pred ---cccCCCCeEEEEEEcCCCHHHHHHHHHHHHcCCcCCCCcEEEEEccEEEEEcC----CCCeEEeCCCcCCC------
Confidence 8999999999999988655543 233344443 3468899999986 78999999999864
Q ss_pred ceEEEEEeecccccccc
Q 020123 313 STFVEIKRVPFQSLMIS 329 (331)
Q Consensus 313 ~~~~~i~~~p~~~~~~~ 329 (331)
++++|++.|.++.++.
T Consensus 277 -~p~~i~v~p~al~v~~ 292 (304)
T PRK13337 277 -LPAEFENLYRHIEVFV 292 (304)
T ss_pred -CCEEEEEecceEEEEe
Confidence 3599999999998874
No 9
>PRK00861 putative lipid kinase; Reviewed
Probab=100.00 E-value=8e-38 Score=294.42 Aligned_cols=223 Identities=21% Similarity=0.209 Sum_probs=168.4
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.||++|||||||+|+|+|.. .+++||+||.||||||||+||++. ++.+|++ .|.+|.++++|+++
T Consensus 60 ~vv~~GGDGTl~evv~~l~~-------~~~~lgviP~GTgNdfAr~lgi~~----~~~~a~~----~i~~g~~~~iDlg~ 124 (300)
T PRK00861 60 LIIASGGDGTLSAVAGALIG-------TDIPLGIIPRGTANAFAAALGIPD----TIEEACR----TILQGKTRRVDVAY 124 (300)
T ss_pred EEEEECChHHHHHHHHHHhc-------CCCcEEEEcCCchhHHHHHcCCCC----CHHHHHH----HHHcCCcEEeeEEE
Confidence 58999999999999999974 468999999999999999999965 4555544 56789999999987
Q ss_pred EEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccCCCcc
Q 020123 82 AVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNK 161 (331)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k 161 (331)
+ ++++|+|++|+||||+|++.+++.+ | .++ |+
T Consensus 125 v----------------------------------------n~~~fin~a~~G~~a~v~~~~~~~~--k-----~~~-G~ 156 (300)
T PRK00861 125 C----------------------------------------NGQPMILLAGIGFEAETVEEADREA--K-----NRF-GI 156 (300)
T ss_pred E----------------------------------------CCEEEEEEEeccHHHHHHHHhhHHH--H-----hcc-cH
Confidence 5 2579999999999999999876543 1 233 88
Q ss_pred ccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhcc
Q 020123 162 LIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKK 241 (331)
Q Consensus 162 ~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~~ 241 (331)
++|++.+++.++..+ .++++++ ++ ++.++ .++.+++++|++++++.+.. ..
T Consensus 157 ~aY~~~~l~~l~~~~-------------~~~~~i~-~d---g~~~~--~~~~~i~v~N~~~~~~~~~~---g~------- 207 (300)
T PRK00861 157 LAYILSGLQQLRELE-------------SFEVEIE-TE---DQIIT--TNAVAVTVANAAPPTSVLAQ---GP------- 207 (300)
T ss_pred HHHHHHHHHHhccCC-------------CeeEEEE-EC---CeEEE--EEEEEEEEECCCCccccccc---CC-------
Confidence 999998888764332 1334433 22 34443 25788999999866543220 12
Q ss_pred CcccccCCCCeEEEEEecchhhHHHH------HHhhcccc-------eeeeecEEEEEEcCCcceeceEEecCccccCCC
Q 020123 242 GFVEAHADDGLLEIFGLKQGWHASFV------MVELISAK-------HIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPL 308 (331)
Q Consensus 242 ~~~~a~~~DG~Lev~~~~~~~~~~~~------~~~l~~g~-------~l~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p 308 (331)
|+|+++||+||+++++..+.+.++ +..+..|+ +..++++++|+.+ +++++|+|||....
T Consensus 208 --p~a~~~DG~ldv~iv~~~~~~~~l~~~~~l~~~~~~g~~~~~~~v~~~~~~~i~I~~~----~~~~~~~DGE~~~~-- 279 (300)
T PRK00861 208 --GAVIPDDGLLDVTIVAPKNLAEAVAASYHLLQTALQGNPAERDDIGYLRAKQVKITTD----PPQKVVIDGEVVGT-- 279 (300)
T ss_pred --CCCCCCCceEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCCCCceEEEEccEEEEEeC----CCeEEEECCccCCC--
Confidence 489999999999999886655442 22233343 3468899999986 78999999999753
Q ss_pred CCCCceEEEEEeecccccccc
Q 020123 309 NRDYSTFVEIKRVPFQSLMIS 329 (331)
Q Consensus 309 ~~~~~~~~~i~~~p~~~~~~~ 329 (331)
++++|++.|.++.++.
T Consensus 280 -----~p~~i~v~p~al~v~~ 295 (300)
T PRK00861 280 -----TPIEIECLPRSLKVFA 295 (300)
T ss_pred -----ceEEEEEECCEEEEEe
Confidence 4699999999998875
No 10
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=100.00 E-value=7e-37 Score=286.95 Aligned_cols=223 Identities=22% Similarity=0.288 Sum_probs=170.2
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.||++|||||+++|+|++... ...++||+||.||+|||||+||++. ++.+++ +.+.+++.+++|++.
T Consensus 60 ~ivv~GGDGTl~~v~~~l~~~-----~~~~~lgiiP~Gt~N~~a~~l~i~~----~~~~~~----~~l~~~~~~~~Dlg~ 126 (293)
T TIGR00147 60 TVIAGGGDGTINEVVNALIQL-----DDIPALGILPLGTANDFARSLGIPE----DLDKAA----KLVIAGDARAIDMGQ 126 (293)
T ss_pred EEEEECCCChHHHHHHHHhcC-----CCCCcEEEEcCcCHHHHHHHcCCCC----CHHHHH----HHHHcCCceEEEEEE
Confidence 589999999999999999752 2356999999999999999999964 455554 456779999999987
Q ss_pred EEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccce-EeeeeecchhHHHhhhhhhccccCCCccccCCCc
Q 020123 82 AVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGV-FYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISN 160 (331)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~ 160 (331)
+ ++++ |+|++|+|+||+++..++... +.++ |
T Consensus 127 v----------------------------------------~~~~~fln~~g~G~~a~v~~~~~~~~-------k~~~-g 158 (293)
T TIGR00147 127 V----------------------------------------NKQYCFINMAGGGFGTEITTETPEKL-------KAAL-G 158 (293)
T ss_pred E----------------------------------------CCeEEEEEEEeechhhHhHhhCCHHH-------Hhcc-c
Confidence 5 2478 999999999999998876432 1244 8
Q ss_pred cccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhc
Q 020123 161 KLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEK 240 (331)
Q Consensus 161 k~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~ 240 (331)
+++|+..+++.++..+ .++++++ ++ ++.++ .+..+++++|+++||||+. ++|
T Consensus 159 ~~~Y~~~~l~~l~~~~-------------~~~~~i~-~d---~~~~~--~~~~~~~v~n~~~~gg~~~----~~p----- 210 (293)
T TIGR00147 159 SLSYILSGLMRMDTLQ-------------PFRCEIR-GE---GEHWQ--GEAVVFLVGNGRQAGGGQK----LAP----- 210 (293)
T ss_pred hHHHHHHHHHHHhhCC-------------CeeEEEE-EC---CeEEE--eeEEEEEEeCCcccCCCcc----cCC-----
Confidence 8999998887653322 1234433 32 34443 3577788999999999998 454
Q ss_pred cCcccccCCCCeEEEEEecchhhHHHH--HHhhcccc-------eeeeecEEEEEEcCCcceeceEEecCccccCCCCCC
Q 020123 241 KGFVEAHADDGLLEIFGLKQGWHASFV--MVELISAK-------HIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRD 311 (331)
Q Consensus 241 ~~~~~a~~~DG~Lev~~~~~~~~~~~~--~~~l~~g~-------~l~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~ 311 (331)
+++++||+||++++++.+.+.++ +..+..|+ +..++++++|+.+ +++++|+|||.+...
T Consensus 211 ----~a~~~DG~l~v~~v~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~i~~~----~~~~~~iDGE~~~~~---- 278 (293)
T TIGR00147 211 ----DASINDGLLDLRIFTNDNLLPALVLTLMSDEGKHTDNPNIIYGKASRIDIQTP----HKITFNLDGEPLGGT---- 278 (293)
T ss_pred ----ccccCCCeeEEEEEcCCCHHHHHHHHHHHhcCCCCCCCcEEEEEccEEEEEcC----CCcEEEeCCCcCCCC----
Confidence 89999999999999886655443 23333343 4568999999986 688999999998643
Q ss_pred CceEEEEEeeccccccc
Q 020123 312 YSTFVEIKRVPFQSLMI 328 (331)
Q Consensus 312 ~~~~~~i~~~p~~~~~~ 328 (331)
+++|++.|.++.++
T Consensus 279 ---p~~i~v~p~al~~~ 292 (293)
T TIGR00147 279 ---PFHIEILPAHLRCR 292 (293)
T ss_pred ---cEEEEEEhhccEEe
Confidence 49999999998775
No 11
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-38 Score=300.77 Aligned_cols=272 Identities=35% Similarity=0.626 Sum_probs=197.4
Q ss_pred CEEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEE
Q 020123 1 MRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSW 80 (331)
Q Consensus 1 ~~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~ 80 (331)
+||++|||||||.|+++-|-..+ ....+|+||+|+|||||+||.|+|+.+|..+| +.++++++.+|.+..+|.|
T Consensus 418 LRILaCGGDGTVGWiLStLD~L~---l~p~PPvailPLGTGNDLARtlnWGGgytDEP---vSkil~~ve~gtvVqLDRW 491 (1004)
T KOG0782|consen 418 LRILACGGDGTVGWILSTLDNLN---LPPYPPVAILPLGTGNDLARTLNWGGGYTDEP---VSKILQAVEHGTVVQLDRW 491 (1004)
T ss_pred eEEEEecCCCceeehhhhhhhcC---CCCCCCeeEeecCCcchHHHhcccCCCcCcch---HHHHHHHHhcCcEEeeeee
Confidence 68999999999999999986543 24578999999999999999999999988765 6678889999999999999
Q ss_pred EEEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccCCCc
Q 020123 81 HAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISN 160 (331)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~ 160 (331)
.+.++ |+.+. -+. ..++|-. +..| -..|.||||+||||+|..+|+++|+.+|.+|.+|++|
T Consensus 492 ~lhvE-pNp~~-------~pE---e~ddG~~--~~LP------L~VfnNYFSlGfDAHVtLeFHeSReANPekfNSRfrN 552 (1004)
T KOG0782|consen 492 RLHVE-PNPSC-------NPE---EEDDGMQ--SALP------LTVFNNYFSLGFDAHVTLEFHESREANPEKFNSRFRN 552 (1004)
T ss_pred eeccc-CCCCC-------Chh---hhcccch--hccc------hhHhhccccccccceEEEEeccccccCHHHHHHHHhh
Confidence 98764 21110 000 0112211 1122 3589999999999999999999999999999999999
Q ss_pred cccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhc
Q 020123 161 KLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEK 240 (331)
Q Consensus 161 k~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~ 240 (331)
|+.|+..++..++...+ +.|.+.+++.+..+|- ..+..++ +...|++.|+++|.+|..|||+ |+. +
T Consensus 553 kmfYaG~afsDfl~rSs-------kDL~khi~vvCDG~Dl-TPkIqeL--K~qCivFlNIprYcaGTmPWG~--pgd--h 618 (1004)
T KOG0782|consen 553 KMFYAGLAFSDFLKRSS-------KDLCKHITVVCDGVDL-TPKIQEL--KLQCIVFLNIPRYCAGTMPWGE--PGD--H 618 (1004)
T ss_pred hhhhcchhHHHHHhhhh-------HHhhhheEEEecCccC-Chhhhhc--ccceEEEecchhhhcCccCCCC--CCc--c
Confidence 99999999887543211 1222223332221110 0111122 5678999999999999999984 321 1
Q ss_pred cCcccccCCCCeEEEEEecchhhHHHHHHhhcccceeeeecEEEEEEcCCcceeceEEecCccccCCCCCCCceEEEEEe
Q 020123 241 KGFVEAHADDGLLEIFGLKQGWHASFVMVELISAKHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKR 320 (331)
Q Consensus 241 ~~~~~a~~~DG~Lev~~~~~~~~~~~~~~~l~~g~~l~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~~~~~~~i~~ 320 (331)
--|..+..+||.+||+.|.-.+..++-+ -.+|.|+.|+++|++.+. +.+|+|+|||+....|. .|.|..
T Consensus 619 hDfePqrhdDGyvEViGFTmasLAALQv--GGhGERl~QCreV~l~T~----KaIPmQVDGEPC~LAps-----~Iri~l 687 (1004)
T KOG0782|consen 619 HDFEPQRHDDGYVEVIGFTMASLAALQV--GGHGERLAQCREVRLITN----KAIPMQVDGEPCLLAPS-----IIRIGL 687 (1004)
T ss_pred ccCCccccCCceEEEEeeeHHHHHHHhh--cCcchhhhhceeEEEEec----cccceeecCcchhcchh-----heEEee
Confidence 2245677999999999987653322211 137899999999999886 89999999999876663 466655
Q ss_pred ec
Q 020123 321 VP 322 (331)
Q Consensus 321 ~p 322 (331)
--
T Consensus 688 rn 689 (1004)
T KOG0782|consen 688 RN 689 (1004)
T ss_pred cc
Confidence 43
No 12
>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=3e-36 Score=283.23 Aligned_cols=225 Identities=26% Similarity=0.392 Sum_probs=174.0
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.||++|||||||||+|+|... ...+||+||.||+|||||+||||.+ ++.+ +++.+.+|+.+.+|+++
T Consensus 61 ~via~GGDGTv~evingl~~~------~~~~LgilP~GT~NdfAr~Lgip~~---~~~~----Al~~i~~g~~~~vDlg~ 127 (301)
T COG1597 61 TVIAAGGDGTVNEVANGLAGT------DDPPLGILPGGTANDFARALGIPLD---DIEA----ALELIKSGETRKVDLGQ 127 (301)
T ss_pred EEEEecCcchHHHHHHHHhcC------CCCceEEecCCchHHHHHHcCCCch---hHHH----HHHHHHcCCeEEEeehh
Confidence 589999999999999999973 2223999999999999999999752 2444 45567789999999985
Q ss_pred EEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccc-eEeeeeecchhHHHhhhhhhccccCCCccccCCCc
Q 020123 82 AVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEG-VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISN 160 (331)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~ 160 (331)
+ +++ ||+|.+|+|++|++++.++..|. .++ +
T Consensus 128 ~----------------------------------------~~~~~fin~a~~G~~a~~~~~~~~~~k-------~~~-g 159 (301)
T COG1597 128 V----------------------------------------NGRRYFINNAGIGFDAEVVAAVEEERK-------KGF-G 159 (301)
T ss_pred c----------------------------------------CCcceEEEEeecchhHHHHHhhcHHHH-------hcc-c
Confidence 2 234 99999999999999999998763 233 8
Q ss_pred cccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhc
Q 020123 161 KLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEK 240 (331)
Q Consensus 161 k~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~ 240 (331)
.++|++.+++.+...++ +.++++ ++. +.. ++....+.+.|++++||++. ++|
T Consensus 160 ~~~y~~~~~~~l~~~~~-------------~~~~i~-~d~---~~~--~~~~~~~~~~~~~~~gg~~~----~~p----- 211 (301)
T COG1597 160 RLAYALAGLAVLARLKP-------------FRIEIE-YDG---KTF--EGEALALLVFNGNSYGGGMK----LAP----- 211 (301)
T ss_pred hHHHHHHHHHhccccCC-------------CcEEEE-EcC---cEE--EEEEEEEEEecCcccccccc----cCC-----
Confidence 89999988876544333 234443 443 222 23578889999999999988 574
Q ss_pred cCcccccCCCCeEEEEEecchhhHHH--HHHhhcccce-------eeeecEEEEEEcCCcceeceEEecCccccCCCCCC
Q 020123 241 KGFVEAHADDGLLEIFGLKQGWHASF--VMVELISAKH-------IAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRD 311 (331)
Q Consensus 241 ~~~~~a~~~DG~Lev~~~~~~~~~~~--~~~~l~~g~~-------l~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~ 311 (331)
+++++||+|++++++....+.+ ++..+.+|++ ..+++.++|+++ .++++++|||+....|
T Consensus 212 ----~a~~~dG~l~~~i~~~~~~~~~~~l~~~~~~G~~~~~~~v~~~~~~~~~i~~~----~~~~~~~DGE~~~~~p--- 280 (301)
T COG1597 212 ----DASLDDGLLDVYILKPQSLLELLALLPDLLRGKHLENPDVEYLRAKKLEITSD----PPIPVNLDGEYLGKTP--- 280 (301)
T ss_pred ----cCCCCCceEEEEEEccccHHHHHHHHHHHhCCCccCCCCeEEEeccEEEEEcC----CCceEeeCCccCCCCc---
Confidence 9999999999999999644443 3455555543 357888999987 7999999999987654
Q ss_pred CceEEEEEeeccccccccC
Q 020123 312 YSTFVEIKRVPFQSLMISG 330 (331)
Q Consensus 312 ~~~~~~i~~~p~~~~~~~~ 330 (331)
++|++.|+++.+...
T Consensus 281 ----~~i~~~p~al~vl~p 295 (301)
T COG1597 281 ----VTIEVLPGALRVLVP 295 (301)
T ss_pred ----EEEEEecccEEEEcC
Confidence 899999999988754
No 13
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=100.00 E-value=4.6e-34 Score=283.68 Aligned_cols=249 Identities=18% Similarity=0.165 Sum_probs=166.0
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhc----CCCCCCCCchHHHHHHHHHHHhCCCeeee
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSF----GWGGSFPFAWKSAVKRTLQRASAGPICRL 77 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~l----g~~~~~~~~~~~a~~~~l~~i~~g~~~~i 77 (331)
.||++|||||||||+|+|.....+....++|||+||+||||||||+| |++. ++.+|+. .|..|..+++
T Consensus 171 ~VV~vGGDGTlnEVvNGL~~~~~~~~~~~~pLGiIPaGTgNdfArsL~~~~gip~----~~~~A~~----~I~~g~~~~v 242 (481)
T PLN02958 171 GIVCVSGDGILVEVVNGLLEREDWKTAIKLPIGMVPAGTGNGMAKSLLDSVGEPC----SATNAVL----AIIRGHKCSL 242 (481)
T ss_pred EEEEEcCCCHHHHHHHHHhhCccccccccCceEEecCcCcchhhhhhccccCCCc----CHHHHHH----HHHcCCceEE
Confidence 58999999999999999986432222347899999999999999999 7754 5666554 4677999999
Q ss_pred eEEEEEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccC
Q 020123 78 DSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGP 157 (331)
Q Consensus 78 Di~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~ 157 (331)
|+++|... + ...+|+|++|+||||+|....+++ |
T Consensus 243 Dlg~v~~~-----------------------------~-------~~~f~vn~~g~GfdAdV~~~se~k----------r 276 (481)
T PLN02958 243 DVATILQG-----------------------------E-------TKFFSVLMLAWGLVADIDIESEKY----------R 276 (481)
T ss_pred eEEEEEcC-----------------------------C-------ceEEEEEeeeeehhhhhhcccccc----------c
Confidence 99987410 0 123458999999999997654322 2
Q ss_pred CCccccccccccccccccccccCCCcccccc--------cceeeeEe-------------e-------eccCCceEeeeC
Q 020123 158 ISNKLIYSGYSCTQGWFLTPCISDPNLRGLK--------NILRMHVK-------------K-------VNCSEWEQVAVP 209 (331)
Q Consensus 158 ~~~k~~Y~~~~~~~l~~~~~~~~~~~l~~l~--------~~~~~~~~-------------~-------~~~~~~~~~~~~ 209 (331)
+.|+++|.+.+++.++..++... .+..+. ...++... . ++..+|+.+ .
T Consensus 277 ~lG~lrY~~~~l~~l~~~r~y~~--~I~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~--~ 352 (481)
T PLN02958 277 WMGSARLDFYGLQRILCLRQYNG--RISFVPAPGFEAYGEPTSYNGESTSKEESGKDKQHGYQGPDVKLENLDWRTI--K 352 (481)
T ss_pred ccchHHHHHHHHHHHHhcCCcce--EEEEEeccccccccccccccccccccccccccccccccCCccccCCccceEe--e
Confidence 34899999999988765432110 000000 00000000 0 000112221 1
Q ss_pred CCcceEEEEeecccccCCCCCCCCCchhhhccCcccccCCCCeEEEEEecchhhHHHH--HHhhcccce-------eeee
Q 020123 210 KSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFV--MVELISAKH-------IAQA 280 (331)
Q Consensus 210 ~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~~~~~~a~~~DG~Lev~~~~~~~~~~~~--~~~l~~g~~-------l~q~ 280 (331)
....++.++|++|||||+. ++| +|+++||+||++++++.+.+.++ +..+..|+| .+++
T Consensus 353 ~~fl~v~v~N~~~~Ggg~~----iaP---------~A~l~DG~LDlviv~~~s~~~lL~~l~~~~~G~h~~~~~V~~~k~ 419 (481)
T PLN02958 353 GPFVSVWLHNVPWGGEDTL----AAP---------DAKFSDGYLDLILIKDCPKLALLALMTKLSDGTHVKSPYVMYLKV 419 (481)
T ss_pred cceeEEeeccCcccCCCcc----cCC---------cccCCCCeEEEEEEcCCCHHHHHHHHHHHhCCCccCCCceEEEEE
Confidence 1233355999999999987 675 99999999999999987665543 344455554 4688
Q ss_pred cEEEEEEcCC---cceeceEEecCccccCCCCCCCceEEEEEeeccccccc
Q 020123 281 AAIRLEFRGG---EWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 328 (331)
Q Consensus 281 ~~v~i~~~~~---~~~~~~~qiDGE~~~~~p~~~~~~~~~i~~~p~~~~~~ 328 (331)
++++|+.... +.++.++++|||.+... +++|++.|.++.++
T Consensus 420 k~~~I~~~~~~~~~~~~~~i~iDGE~~~~~-------p~~i~v~~~al~~~ 463 (481)
T PLN02958 420 KAFVLEPGPRTDDPTKGGIIDSDGEVLARG-------NGSYKCDQKALMSY 463 (481)
T ss_pred EEEEEEECCcccCcCcCCeEEECCcccCCC-------Cceeeecccccccc
Confidence 9999987310 01457899999998644 47888888887653
No 14
>PRK12361 hypothetical protein; Provisional
Probab=100.00 E-value=5.7e-33 Score=281.24 Aligned_cols=227 Identities=23% Similarity=0.276 Sum_probs=163.7
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhc-CCCCCCCCchHHHHHHHHHHHhCCCeeeeeEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSF-GWGGSFPFAWKSAVKRTLQRASAGPICRLDSW 80 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~l-g~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~ 80 (331)
.||++|||||||+|+|++.. .+++||+||.||||||||+| |++... .++.+|++ .|.+|+.+++|++
T Consensus 300 ~Viv~GGDGTl~ev~~~l~~-------~~~~lgiiP~GTgNdfAr~L~gi~~~~-~~~~~a~~----~i~~g~~~~iD~g 367 (547)
T PRK12361 300 IVIACGGDGTVTEVASELVN-------TDITLGIIPLGTANALSHALFGLGSKL-IPVEQACD----NIIQGHTQRIDTA 367 (547)
T ss_pred EEEEECCCcHHHHHHHHHhc-------CCCCEEEecCCchhHHHHHhcCCCCCC-ccHHHHHH----HHHhCCCeEEEEE
Confidence 58999999999999999974 56899999999999999999 996410 24555554 4667999999998
Q ss_pred EEEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccCCCc
Q 020123 81 HAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISN 160 (331)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~ 160 (331)
.+ ++++|+|++|+||||+|+..+++.+ | .++ |
T Consensus 368 ~v----------------------------------------n~~~fln~agiG~da~v~~~~~~~~--k-----~~~-G 399 (547)
T PRK12361 368 RC----------------------------------------NDRLMLLLVGIGFEQKMIESADRER--K-----NAL-G 399 (547)
T ss_pred EE----------------------------------------cCeEEEEEEeechhHHHHHhccHHH--H-----hcc-C
Confidence 74 3579999999999999999887654 2 233 8
Q ss_pred cccccccccccccccccccCCCcccccccceeeeEeeeccCCceEeeeCCCcceEEEEeecccccCCCCCCCCCchhhhc
Q 020123 161 KLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEK 240 (331)
Q Consensus 161 k~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~ 240 (331)
+++|...+++.++..+ ..+++++ +++ .+..+ .++.+++++|+++|++.... ..
T Consensus 400 ~laY~~~~~~~l~~~~-------------~~~l~i~-~dg--~~~~~--~~~~~l~v~N~~~~~~~~~~---Gg------ 452 (547)
T PRK12361 400 QLAYLDGLWRAVNENE-------------TLTLTVT-LDD--AEPQT--ISTHSLVVANAAPFTSLLAQ---GG------ 452 (547)
T ss_pred HHHHHHHHHHHhhcCC-------------CeeEEEE-ECC--CCceE--EEEEEEEEEcCCCccccccc---CC------
Confidence 8999988877653322 1334443 332 22222 25788899999766432110 00
Q ss_pred cCcccccCCCCeEEEEEecchhh----HHHH----HHhh-----cccceeeeecEEEEEEcCCcceeceEEecCccccCC
Q 020123 241 KGFVEAHADDGLLEIFGLKQGWH----ASFV----MVEL-----ISAKHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQP 307 (331)
Q Consensus 241 ~~~~~a~~~DG~Lev~~~~~~~~----~~~~----~~~l-----~~g~~l~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~ 307 (331)
..++++||+||++++++... +..+ +.+. ....+..++++++|+.+ +++++|+|||+...
T Consensus 453 ---g~~~~~DG~Ldv~~v~~~~~~~~~l~~l~~~~~~g~~~~~~~~~v~~~~~k~v~I~~~----~~~~~~iDGE~~~~- 524 (547)
T PRK12361 453 ---GEPNMTDGLLDITWLDSGGEPGEQLLSLAELALSGLGKEPEANKVHHAHAKKVTISSQ----KPIKYVIDGELFED- 524 (547)
T ss_pred ---CCCCCCCceeEEEEEcCCCcchHHHHHHHHHHHHHhcccCCCCceEEEEeeEEEEEeC----CceEEEECCccCCc-
Confidence 13578999999999987532 1111 1111 12235578999999986 78999999999753
Q ss_pred CCCCCceEEEEEeecccccccc
Q 020123 308 LNRDYSTFVEIKRVPFQSLMIS 329 (331)
Q Consensus 308 p~~~~~~~~~i~~~p~~~~~~~ 329 (331)
++++|++.|.++.++.
T Consensus 525 ------~p~~i~v~p~al~vlv 540 (547)
T PRK12361 525 ------EDLTIEVQPASLKVFV 540 (547)
T ss_pred ------eEEEEEEecCceEEEe
Confidence 5699999999998875
No 15
>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. The DAG kinase domain is assumed to be an accessory domain. Upon cell stimulation, DAG kinase converts DAG into phosphatidate, initiating the resynthesis of phosphatidylinositols and attenuating protein kinase C activity. It catalyses the reaction: ATP + 1,2-diacylglycerol = ADP + 1,2-diacylglycerol 3-phosphate. The enzyme is stimulated by calcium and phosphatidylserine and phosphorylated by protein kinase C. This domain is always associated with IPR001206 from INTERPRO.; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway
Probab=99.97 E-value=8.4e-31 Score=225.17 Aligned_cols=160 Identities=36% Similarity=0.637 Sum_probs=134.1
Q ss_pred eEeeeeecchhHHHhhhhhhccccCCCccccCCCccccccccccccccccccccCCCcccccccceeeeEeeeccCCceE
Q 020123 126 VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQ 205 (331)
Q Consensus 126 ~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 205 (331)
.|.||||||+||+|+.+|++.|+++|.+|.+|+.||++|+..++++++ .++|. .+.+ .++ +. -||+.
T Consensus 1 v~~NYfsiG~DA~ia~~Fh~~R~~~P~~f~sr~~NK~~Y~~~g~k~~~-~~~~~------~~~~--~i~---l~-~dg~~ 67 (161)
T PF00609_consen 1 VMNNYFSIGVDAQIALGFHHSREKNPEKFNSRLLNKLWYAFFGFKALF-QRSCK------NLPK--KIE---LE-VDGKE 67 (161)
T ss_pred CeEecccccHhhHHHHHHhhccccChhhhccHHHHHHHHHHHHHHHHH-hchhc------Cchh--hcc---cc-cCCee
Confidence 489999999999999999999999999999999999999999999987 44442 1221 122 22 24678
Q ss_pred eeeCCCcceEEEEeecccccCCCCCCCCCchhhhccCcccccCCCCeEEEEEecchhhHHHHHHhhcccceeeeecEEEE
Q 020123 206 VAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMVELISAKHIAQAAAIRL 285 (331)
Q Consensus 206 ~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~~~~~~a~~~DG~Lev~~~~~~~~~~~~~~~l~~g~~l~q~~~v~i 285 (331)
+.++.++..+++.|+++|+||.++|+...+.... ..|..++++||+|||+.+.+.+++..++..+.+++|++|+++++|
T Consensus 68 ~~lp~~~~~iv~lNIpSy~gG~~~W~~~~~~~~~-~~~~~~~~~Dg~lEVvg~~~~~hl~~~~~g~~~~~rl~Q~~~i~i 146 (161)
T PF00609_consen 68 VDLPSSLESIVFLNIPSYGGGVDLWGNSKPDRSK-LKFKKQSMDDGKLEVVGFRGSFHLGQIQAGLSSAKRLAQGRPIRI 146 (161)
T ss_pred EeeecceeEEEEEccccccCCcccccCCcccccc-cccccccccCceEEEEEEcCchhhhhhhhccCCceEeecCCEEEE
Confidence 8888789999999999999999999865432111 245679999999999999999999998888889999999999999
Q ss_pred EEcCCcce-eceEEecCcc
Q 020123 286 EFRGGEWK-DAFMQMDGEP 303 (331)
Q Consensus 286 ~~~~~~~~-~~~~qiDGE~ 303 (331)
+++ + ++++|+|||+
T Consensus 147 ~~~----~~~~~~QvDGEp 161 (161)
T PF00609_consen 147 ETK----ENKVPFQVDGEP 161 (161)
T ss_pred EEC----CCceeEEeCCCC
Confidence 998 6 9999999996
No 16
>PLN02204 diacylglycerol kinase
Probab=99.96 E-value=4.8e-28 Score=241.02 Aligned_cols=225 Identities=14% Similarity=0.079 Sum_probs=143.4
Q ss_pred CCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEEEEEecCCCCccCCCCCCCCCCcccccc
Q 020123 29 PVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQ 108 (331)
Q Consensus 29 ~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (331)
.+++||+||+||+||||+++..+. ||..++. .|..|+.+++|+++|.-+...
T Consensus 315 ~~~~lGIIPaGSgN~~a~~~~g~~----dp~taa~----~Ii~G~~~~lDig~V~~~~~~-------------------- 366 (601)
T PLN02204 315 ERFRFGIIPAGSTDAIVMCTTGER----DPVTSAL----HIILGRRVCLDIAQVVRWKTT-------------------- 366 (601)
T ss_pred CCceEEEECCccHHHHHHHccCCC----CHHHHHH----HHHhCCCeEeeEEEEeccccc--------------------
Confidence 457899999999999999887644 5666554 366799999999998531100
Q ss_pred cccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccCCCccccccccccccccccccccCCCcccccc
Q 020123 109 GLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLK 188 (331)
Q Consensus 109 g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k~~Y~~~~~~~l~~~~~~~~~~~l~~l~ 188 (331)
..+ + .....+||+|.+|+||+|+|+...+++| ++|+++|.+.+++.++.+++
T Consensus 367 -~~~--~----~~~~~ryf~s~ag~Gf~gdVi~esek~R----------~mG~~rY~~~g~k~~~~~r~----------- 418 (601)
T PLN02204 367 -STS--E----IEPYVRYAASFAGYGFYGDVISESEKYR----------WMGPKRYDYAGTKVFLKHRS----------- 418 (601)
T ss_pred -ccc--c----ccccceEEEEEeecchHHHHHHHhhhhc----------ccchHHHHHHHHHHHHhCCC-----------
Confidence 000 0 0012589999999999999998865432 35899999999988765543
Q ss_pred cceeeeEeeeccCCceEeee------------CCC--c----ceEEEEeecc---------------------cccCCCC
Q 020123 189 NILRMHVKKVNCSEWEQVAV------------PKS--V----RAIVALNLHN---------------------YASGRNP 229 (331)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~------------~~~--~----~~l~v~N~~~---------------------~ggg~~~ 229 (331)
++.++. ++. +..+. +.+ . ..+.|+|.++ +|+.+..
T Consensus 419 --y~~~V~-~d~---~~~~~~~~~~~~~~~~~~~~~~~~~c~~~c~Vcn~~~~~~~~~~~p~~~~~~~~W~~~~G~f~~v 492 (601)
T PLN02204 419 --YEAEVA-YLE---TESEKSKASSEARKRTGPKKSEKIVCRTNCSVCNTKVSTNSPSTTPNSCPEETRWLRSKGRFLSV 492 (601)
T ss_pred --ceEEEE-ECC---eEeeecccccccccccccccccchhhhhheeeecccccccccccccccccccccceeecCceEEe
Confidence 223322 221 11110 000 0 1466777551 2221111
Q ss_pred CCCC-------CchhhhccCcccccCCCCeEEEEEecchhhHHHH--HHhhc-c-cc-------eeeeecEEEEEEcCCc
Q 020123 230 WGNL-------SPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFV--MVELI-S-AK-------HIAQAAAIRLEFRGGE 291 (331)
Q Consensus 230 w~~~-------~p~~~~~~~~~~a~~~DG~Lev~~~~~~~~~~~~--~~~l~-~-g~-------~l~q~~~v~i~~~~~~ 291 (331)
+..+ +|+.+ .|+|.++||.|||+++++.+++.++ +..+. + |. +.+++++++|+..
T Consensus 493 G~~iis~~~~rap~gl----~pdA~l~DG~LDLilVr~~s~~~~L~~L~~l~~~gG~~l~~~~Ve~~ktk~f~~~s~--- 565 (601)
T PLN02204 493 GAAIISNRNERAPDGL----VADAHLSDGFLHLILIKDCPHPLYLWHLTQLAKRGGEPLNFEFVEHHKTPAFTFTSF--- 565 (601)
T ss_pred eeeccccccccccccc----CCCCcCCCCeEEEEEECCCCHHHHHHHHHHHHhhcCccCCCCcEEEEEeeEEEEEEC---
Confidence 1000 21111 2589999999999999997665543 33332 2 23 3468899999875
Q ss_pred ceeceEEecCccccCCCCCCCceEEEEEeecccccccc
Q 020123 292 WKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMIS 329 (331)
Q Consensus 292 ~~~~~~qiDGE~~~~~p~~~~~~~~~i~~~p~~~~~~~ 329 (331)
.++.++++|||.+... ++++++.|++..++.
T Consensus 566 ~~~~~~niDGE~~~~~-------~v~v~V~~~al~lfa 596 (601)
T PLN02204 566 GDESVWNLDGEIFQAH-------QLSAQVFRGLVNLFA 596 (601)
T ss_pred CCCceEEeCCCcCCCc-------cEEEEEEcCeeEEEe
Confidence 2467799999997643 599999999987764
No 17
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=99.95 E-value=2.3e-29 Score=249.90 Aligned_cols=164 Identities=30% Similarity=0.516 Sum_probs=130.5
Q ss_pred eEeeeeecchhHHHhhhhhhccccCCCccccCCCccccccccccccccccccccCCCcccccccceeeeEeeeccCCceE
Q 020123 126 VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQ 205 (331)
Q Consensus 126 ~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 205 (331)
.|.||||||+||.|...|+..|+.+|.++++|.+|+|||.+.|-|+|. +++| +.|.+ ++. ++| ||+.
T Consensus 614 VMNNYFGIGlDAKISLDFhnKReEhPeKcrSR~kn~MWYGvLGtKeLL-hrTy------rnLEQ----RV~-LEC-DG~~ 680 (1099)
T KOG1170|consen 614 VMNNYFGIGLDAKISLDFHNKREEHPEKCRSRSKNFMWYGVLGTKELL-HRTY------RNLEQ----RVK-LEC-DGVP 680 (1099)
T ss_pred hhccccccccceeEeeecccccccChHHHhHHhhhcchhhhcchHHHH-HHHH------HhHHH----Hee-eec-CCcc
Confidence 688999999999999999999999999999999999999999988863 3333 12222 233 566 5788
Q ss_pred eeeCCCcceEEEEeecccccCCCCCCCCCchhhhccCcccccCCCCeEEEEEecchhhHHHHHHhhcccceeeeecEEEE
Q 020123 206 VAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMVELISAKHIAQAAAIRL 285 (331)
Q Consensus 206 ~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~~~~~~a~~~DG~Lev~~~~~~~~~~~~~~~l~~g~~l~q~~~v~i 285 (331)
+.+| ....|+|.|+|+|+||.++||... +++.|...++||+.||||.+=+...++....--.+-.|+.|+++|+|
T Consensus 681 i~lP-~LQGIviLNIpSyaGGtNFWGsnk----~dd~f~apSfDDriLEVVAvFGsvqMA~SRvI~LqhHRIAQCr~V~I 755 (1099)
T KOG1170|consen 681 IDLP-SLQGIVILNIPSYAGGTNFWGSNK----DDDEFTAPSFDDRILEVVAVFGSVQMATSRVIRLQHHRIAQCRHVRI 755 (1099)
T ss_pred cCCc-ccceeEEEecccccCcccccCCCC----CCCcccCCCcccceeEEeeeehhHHHHHHHHHHhhhhhhhhceEEEE
Confidence 9888 799999999999999999998432 34456788999999999987665444432111124567899999999
Q ss_pred EEcCCcceeceEEecCccccCCCC
Q 020123 286 EFRGGEWKDAFMQMDGEPWKQPLN 309 (331)
Q Consensus 286 ~~~~~~~~~~~~qiDGE~~~~~p~ 309 (331)
...+ ++++|+|+|||.|.|||+
T Consensus 756 ~IlG--DE~IPVQvDGEaWlQPPG 777 (1099)
T KOG1170|consen 756 VILG--DEGIPVQVDGEAWLQPPG 777 (1099)
T ss_pred EEec--CCCCceeecCccccCCCc
Confidence 9875 499999999999999995
No 18
>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain might either be an accessory domain or else contribute to the catalytic domain. Bacterial homologues are known.
Probab=99.87 E-value=3.7e-22 Score=171.34 Aligned_cols=159 Identities=34% Similarity=0.562 Sum_probs=113.7
Q ss_pred eEeeeeecchhHHHhhhhhhccccCCCccccCCCccccccccccccccccccccCCCccccccc-ceeeeEeeeccCCce
Q 020123 126 VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKN-ILRMHVKKVNCSEWE 204 (331)
Q Consensus 126 ~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k~~Y~~~~~~~l~~~~~~~~~~~l~~l~~-~~~~~~~~~~~~~~~ 204 (331)
.|+|++|+||||+|+..++..|++++.++.+++.|+++|+..+++++++.+ .+. ..++++. ++ ++
T Consensus 1 ~~~N~~giGfDA~V~~~~~~~r~~~~~~~~~~~~g~l~Y~~~~l~~l~~~~----------~~~~~~~~~i~-~d---g~ 66 (160)
T smart00045 1 VMNNYFSIGVDAHIALEFHNKREANPEKFNSRLKNKMWYFELGTKDLFFRT----------CKDLHERIELE-CD---GV 66 (160)
T ss_pred CccccccccHhHHHHHHHHHHhhcCchhhcccceeeeeeeecchHHhhhcc----------ccchhhceEEE-EC---CE
Confidence 489999999999999999887765554444455699999999998875321 110 1133433 33 34
Q ss_pred EeeeCCCcceEEEEeecccccCCCCCCCCCchhhhccCcccccCCCCeEEEEEecchhhHHHHHHhhcccceeeeecEEE
Q 020123 205 QVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMVELISAKHIAQAAAIR 284 (331)
Q Consensus 205 ~~~~~~~~~~l~v~N~~~~ggg~~~w~~~~p~~~~~~~~~~a~~~DG~Lev~~~~~~~~~~~~~~~l~~g~~l~q~~~v~ 284 (331)
..+.+.++.+++++|++|||||+.+|....+.| +++|+|+++||+||++++++.+++..++....+..++.|+++++
T Consensus 67 ~~~~~~~~~~v~v~N~~~~ggG~~i~p~~~~~~---~~~p~a~~~DG~ldv~~~~~~~~~~~~~~~~~~~v~~~~~~~v~ 143 (160)
T smart00045 67 DVDLPNSLEGIAVLNIPSYGGGTNLWGTTDKED---LNFSKQSHDDGLLEVVGLTGAMHMAQIRQVGLAGRRIAQCSEVR 143 (160)
T ss_pred eccCCCCccEEEEECCCccccCcccccCCcccc---cccCCCCCCCceEEEEEEcCchhhhhhhhccCCCceeecCceEE
Confidence 444432578999999999999999875322222 34679999999999999999877765543233567788999998
Q ss_pred EEEcCCcceeceEEecCcc
Q 020123 285 LEFRGGEWKDAFMQMDGEP 303 (331)
Q Consensus 285 i~~~~~~~~~~~~qiDGE~ 303 (331)
|++.. .+++++|+|||+
T Consensus 144 i~i~~--~~~~~~q~DGE~ 160 (160)
T smart00045 144 ITIKT--SKTIPMQVDGEP 160 (160)
T ss_pred EEEec--CCceeeecCCCC
Confidence 55432 289999999995
No 19
>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.81 E-value=1.6e-19 Score=177.38 Aligned_cols=250 Identities=22% Similarity=0.233 Sum_probs=162.6
Q ss_pred EEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEEE
Q 020123 3 IVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHA 82 (331)
Q Consensus 3 viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~v 82 (331)
||++||||+++||+|||+...+.......|+|+||.||||.||+++.|..++ .-+..+. + .+.+|....+|+..+
T Consensus 240 Iv~vsGDGl~hEVlNGLl~R~D~~~~~klPigiiP~GSGNala~Sv~~~~~~-~~~~~a~---l-~iirg~~t~~dv~~v 314 (579)
T KOG1116|consen 240 IVCVSGDGLLHEVLNGLLERPDWEAAVKLPIGIIPCGSGNALAKSVLWTNGP-DLPLLAT---L-LIIRGRLTPMDVSVV 314 (579)
T ss_pred EEEecCCcCHHHhhhccccccchhhHhcCceeEeecCCccHHHHHhhcccCc-ccchHHH---H-HHHccCCCchheeeh
Confidence 8999999999999999998765444568999999999999999999997753 1133322 2 366799999999886
Q ss_pred EEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccCCCccc
Q 020123 83 VIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKL 162 (331)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~~~~k~ 162 (331)
.+.. ....+++++++.||-|++-...+++|. .|.+
T Consensus 315 ~~~~-----------------------------------~~~~fSfLs~~wGlIADiDI~SEk~R~----------mG~~ 349 (579)
T KOG1116|consen 315 EYAG-----------------------------------KDRHFSFLSAAWGLIADVDIESEKYRW----------MGPA 349 (579)
T ss_pred hhcc-----------------------------------CcceEEEEeeeeeeEEecccchHHHHh----------hcch
Confidence 5410 013688999999999999999887762 3666
Q ss_pred cccccccccccccccccCCCcccccc----------c---------------------------cee----------ee-
Q 020123 163 IYSGYSCTQGWFLTPCISDPNLRGLK----------N---------------------------ILR----------MH- 194 (331)
Q Consensus 163 ~Y~~~~~~~l~~~~~~~~~~~l~~l~----------~---------------------------~~~----------~~- 194 (331)
.|.+.++..++..+..... +..+. . ... +.
T Consensus 350 Rf~lg~~~rl~~lr~Y~gr--i~ylp~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~~~~~~~s~~~e 427 (579)
T KOG1116|consen 350 RFTLGAFLRLIQLRKYKGR--IEYLPAKGKSAEPLPAHELEAADSEGCLSTHADTEPSEYPRLSVPKMSPKSVLRSPVSE 427 (579)
T ss_pred hhhHHHHHHHHhccCCCce--EEEecccccccCcccchhhccccccccccccccccccccccccccccCccccccCcccc
Confidence 6666665554322211000 00000 0 000 00
Q ss_pred ----------Ee---e--eccCCceEeeeCC-CcceEE-EEeecccccCCCCCCCCCchhhhccCcccccCCCCeEEEEE
Q 020123 195 ----------VK---K--VNCSEWEQVAVPK-SVRAIV-ALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFG 257 (331)
Q Consensus 195 ----------~~---~--~~~~~~~~~~~~~-~~~~l~-v~N~~~~ggg~~~w~~~~p~~~~~~~~~~a~~~DG~Lev~~ 257 (331)
.. . ....||+.+ ++ +...+. +.+. |.|..+. .+ |.|.++||.+++++
T Consensus 428 ~s~~~~~~~~~~~p~~~~p~psdw~~~--~~~d~~~~~a~~~s-y~~~d~~----~~---------P~A~~~dg~I~lv~ 491 (579)
T KOG1116|consen 428 TSPVIPEDPLHLSPPLEEPLPSDWEVV--PGVDFVCILAILLS-YLGADMK----FA---------PAARPDDGLIHLVI 491 (579)
T ss_pred cCcccCCccccCCCcccCCCCcceeee--cCcceeeeehhhhh-hccCCcc----cc---------cccccCCCeEEEEE
Confidence 00 0 000134332 22 222221 2222 6666666 45 59999999999999
Q ss_pred ecch-hhHHH--HHHhhccccee---------eeecEEEEEEcCCcceeceEEecCccccCCCCCCCceEEEEEeecccc
Q 020123 258 LKQG-WHASF--VMVELISAKHI---------AQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQS 325 (331)
Q Consensus 258 ~~~~-~~~~~--~~~~l~~g~~l---------~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~~~~~~~i~~~p~~~ 325 (331)
+... ++..+ ++..+.+|.|+ ..++.++++... .+.++++|||.+...| +++++.|+.-
T Consensus 492 ~~~~~~r~~ll~~llald~gsh~~~~~p~v~~~~vra~r~epv~---~~~~~~vDGE~~~~ep-------~q~~v~p~~i 561 (579)
T KOG1116|consen 492 VRAGGSRTQLLRLLLALDKGSHLHVECPFVKYVKVRAFRLEPVT---PSGYFAVDGELVPLEP-------LQVQVLPGLI 561 (579)
T ss_pred EccCCcHHHHHHHHHhhcccccccccCCceeEEEeEEEEEEEec---CCceEEecccEeeccc-------eeEEecccce
Confidence 9875 33332 34556678774 245677877652 4589999999987654 7999999988
Q ss_pred ccccC
Q 020123 326 LMISG 330 (331)
Q Consensus 326 ~~~~~ 330 (331)
.+++|
T Consensus 562 ~~~s~ 566 (579)
T KOG1116|consen 562 LTLSG 566 (579)
T ss_pred eEEec
Confidence 88776
No 20
>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ]. Eukaryotic DAG-kinase (2.7.1.107 from EC) catalyses the phosphorylation of DAG to phosphatidic acid, thus modulating the balance between the two signaling lipids. At least ten different isoforms have been identified in mammals, which form 5 groups characterised by different functional domains, such as the calcium-binding EF hand (see PDOC00018 from PROSITEDOC), PH (see PDOC50003 from PROSITEDOC), SAM (see PDOC50105 from PROSITEDOC) , DAG/PE-binding C1 domain (see PDOC00379 from PROSITEDOC) and ankyrin repeats (see PDOC50088 from PROSITEDOC) []. In bacteria, an integral membrane DAG kinase forms a homotrimeric protein that lacks the DAGKc domain (see PDOC00820 from PROSITEDOC). In contrast, the bacterial yegS protein is a soluble cytosolic protein that contains the DAGKc domain in the N-terminal part. YegS is a lipid kinase with two structural domains, wherein the active site is located in the interdomain cleft, C-terminal to the DAGKc domain which forms an alpha/beta fold []. The tertiary structure resembles that of NAD kinases and contains a metal-binding site in the C-terminal region [, ]. This domain is usually associated with an accessory domain (see IPR000756 from INTERPRO).; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; PDB: 2JGR_A 2BON_A 3T5P_D 3S40_A 2P1R_A 2QV7_A 2QVL_A.
Probab=99.62 E-value=5.9e-16 Score=128.17 Aligned_cols=70 Identities=37% Similarity=0.561 Sum_probs=49.5
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHH-HHHHHHHHHhCCCeeeeeEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKS-AVKRTLQRASAGPICRLDSW 80 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~-a~~~~l~~i~~g~~~~iDi~ 80 (331)
+||++|||||||+++|+++.... ...+||++||+||+|||||+||++.. +.. ++. .+..+..+++|++
T Consensus 57 ~ivv~GGDGTl~~vv~~l~~~~~---~~~~~l~iiP~GT~N~~ar~lg~~~~----~~~~a~~----~~~~~~~~~~d~~ 125 (130)
T PF00781_consen 57 VIVVVGGDGTLNEVVNGLMGSDR---EDKPPLGIIPAGTGNDFARSLGIPSD----PEANAAL----LIILGRVRKIDVG 125 (130)
T ss_dssp EEEEEESHHHHHHHHHHHCTSTS---SS--EEEEEE-SSS-HHHHHTT--SS----HHH-HHH----HHHHSEEEEEEEE
T ss_pred EEEEEcCccHHHHHHHHHhhcCC---CccceEEEecCCChhHHHHHcCCCCC----cHHHHHH----HHHhCCCcEeEEE
Confidence 68999999999999999987431 12579999999999999999999763 333 222 2334677799998
Q ss_pred EE
Q 020123 81 HA 82 (331)
Q Consensus 81 ~v 82 (331)
+|
T Consensus 126 ~v 127 (130)
T PF00781_consen 126 KV 127 (130)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 21
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain is presumed to be the catalytic domain. Bacterial homologues areknown.
Probab=99.54 E-value=9.6e-15 Score=120.11 Aligned_cols=50 Identities=62% Similarity=1.246 Sum_probs=41.9
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCC
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGS 53 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~ 53 (331)
.|+++|||||+|+|+|+|...... ...+|||+||+||+|||||+||++.+
T Consensus 52 ~vvv~GGDGTi~~vvn~l~~~~~~--~~~~plgiiP~GTgNdfar~lgi~~~ 101 (124)
T smart00046 52 RVLVCGGDGTVGWVLNALDKRELP--LPEPPVAVLPLGTGNDLARSLGWGGG 101 (124)
T ss_pred EEEEEccccHHHHHHHHHHhcccc--cCCCcEEEeCCCChhHHHHHcCCCCC
Confidence 689999999999999999864210 11289999999999999999999765
No 22
>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.43 E-value=8.6e-13 Score=124.41 Aligned_cols=242 Identities=15% Similarity=0.083 Sum_probs=159.7
Q ss_pred EEEEcCchhHHHHHHHhhhhcc------CC-C-----CCCCcEEEeecCCCcchhhhcCCCCCCCCchH-HHHHHHHHHH
Q 020123 3 IVVAGGDGTVGWVLGSVGELNK------QG-R-----EPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWK-SAVKRTLQRA 69 (331)
Q Consensus 3 viv~GGDGTl~~vvn~l~~~~~------~~-~-----~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~-~a~~~~l~~i 69 (331)
||++||||-.||++||++...+ ++ + ...+-+|+||+|+.|-..-+---.+ |+. .|+ .|
T Consensus 221 iv~VGGDG~FnEiL~G~llrtQ~~ag~~i~~P~~~lv~~~~RfGiIpAGStd~iv~~t~gt~----D~~TSAl-----HI 291 (516)
T KOG1115|consen 221 IVAVGGDGFFNEILNGYLLRTQEVAGFRIEDPDHPLVSERPRFGIIPAGSTDAIVMCTTGTR----DPVTSAL-----HI 291 (516)
T ss_pred EEEecCchhHHHHHhhhhhhhhhhcCcccCCCCCcccCCCceeeeecCCCcCeEEEEeccCC----cccccee-----ee
Confidence 7899999999999999876532 11 1 2356799999999998877653322 332 232 26
Q ss_pred hCCCeeeeeEEEEEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhcccc
Q 020123 70 SAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNE 149 (331)
Q Consensus 70 ~~g~~~~iDi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~ 149 (331)
+-|....+|+.+|... + ..-||-.|.+|.||.++|....+++|
T Consensus 292 ~lG~~l~vDVctVht~-----------------------~------------kLiRysaSa~gYGFyGDvl~dSEKYR-- 334 (516)
T KOG1115|consen 292 ILGRKLFVDVCTVHTI-----------------------E------------KLIRYSASAAGYGFYGDVLSDSEKYR-- 334 (516)
T ss_pred Eeccceeeeeeeeeec-----------------------c------------hheeeehhhhcccccchhhhhhhhhh--
Confidence 6699999999987521 0 13589999999999999999988765
Q ss_pred CCCccccCCCccccccccccccccccccccCCCcccccccceeee------------Eee-eccCCceEeeeCCCcceEE
Q 020123 150 KPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMH------------VKK-VNCSEWEQVAVPKSVRAIV 216 (331)
Q Consensus 150 ~~~~~~~~~~~k~~Y~~~~~~~l~~~~~~~~~~~l~~l~~~~~~~------------~~~-~~~~~~~~~~~~~~~~~l~ 216 (331)
|+|...|-+.++|++.+++.. ++.-.+...+ .+. -+.+.|+ .+.++...|.
T Consensus 335 --------WmGp~RYDfsglKtflkH~~Y------egeVsFlpa~sen~~qe~~~~g~~~~~~~k~Wq--~~~g~Fl~V~ 398 (516)
T KOG1115|consen 335 --------WMGPKRYDFSGLKTFLKHRSY------EGEVSFLPAESENPCQEPCPSGASLHTRSKTWQ--RNTGRFLKVL 398 (516)
T ss_pred --------ccCchhhhhHHHHHHHhcccc------ceEEEecccccCCchhccccccCCcccCcchhh--hhhhheeeee
Confidence 447788999999987766531 1111111000 000 0112233 3456778889
Q ss_pred EEeecccccCCCCCCCCCchhhhccCcccccCCCCeEEEEEecchhhHHHHHH--hhcc--c------ceeeeecEEEEE
Q 020123 217 ALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMV--ELIS--A------KHIAQAAAIRLE 286 (331)
Q Consensus 217 v~N~~~~ggg~~~w~~~~p~~~~~~~~~~a~~~DG~Lev~~~~~~~~~~~~~~--~l~~--g------~~l~q~~~v~i~ 286 (331)
++|+++...-. |.+ ++| ...++||-+++++++..+++.++.. +..+ + ...+..+.+...
T Consensus 399 c~aipciC~~~-PrG-LaP---------~T~LndGs~dLil~R~~SRF~fi~fl~r~a~~~~qfdf~fVe~y~v~~v~~~ 467 (516)
T KOG1115|consen 399 CRAIPCICNSK-PRG-LAP---------STTLNDGSEDLILCRTKSRFLFIGFLVRSARNERQFDFLFVEAYLVDGVLHL 467 (516)
T ss_pred EeeccccccCC-CCC-cCC---------ccccCCCccceeeeecccchHHHHHHHHHhhcccccCceeeeeeeeeeEEEE
Confidence 99999876533 222 564 8999999999999999877665422 1111 1 122455666555
Q ss_pred EcC---CcceeceEEecCccccCCCCCCCceEEEEEeecc
Q 020123 287 FRG---GEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPF 323 (331)
Q Consensus 287 ~~~---~~~~~~~~qiDGE~~~~~p~~~~~~~~~i~~~p~ 323 (331)
... +..++..+.+|||.+.+|- ++++++-|+
T Consensus 468 s~~~d~~~~d~~eWN~DGeile~p~------~lh~rlHpq 501 (516)
T KOG1115|consen 468 SLIKDCSRPDYLEWNLDGEILEQPK------PLHFRLHPQ 501 (516)
T ss_pred eecCCCCCCCcceeccCcchhcCCc------ceEEEechh
Confidence 432 2235667999999998763 589998886
No 23
>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.26 E-value=1.1e-06 Score=83.51 Aligned_cols=121 Identities=22% Similarity=0.159 Sum_probs=75.0
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCC-CchHHHHHHHHHHHhCCCe---eee
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFP-FAWKSAVKRTLQRASAGPI---CRL 77 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~-~~~~~a~~~~l~~i~~g~~---~~i 77 (331)
.|+|+|||||+.+|+.|++... ....|++++|.|--|....+.-.+ .+. .|....+-..+.++.+++. .++
T Consensus 119 ii~VaGGDGT~~eVVTGi~Rrr----~~~~pv~~~P~G~~~l~~~s~l~~-vfe~~d~V~h~~~a~~avikde~ksv~~f 193 (535)
T KOG4435|consen 119 IIYVAGGDGTIGEVVTGIFRRR----KAQLPVGFYPGGYDNLWLKSMLPS-VFENSDDVRHACEAAMAVIKDEKKSVYAF 193 (535)
T ss_pred eEEEecCCCcHHHhhHHHHhcc----cccCceeeccCccchHhhhhhchh-hhccchHHHHHHHHHHHHhcccccceEEE
Confidence 4899999999999999999753 367899999999988877665332 111 1222233333334556665 666
Q ss_pred eEEEEEEecCCCCccCCCCCCCCCCcccccccccccCCCCcccccccceEeeeeecchhHHHhhhhhhccccCCCccccC
Q 020123 78 DSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGP 157 (331)
Q Consensus 78 Di~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~~iG~dA~v~~~~~~~r~~~~~~~~~~ 157 (331)
|+-. +| +.. ...+-+|-++.|.--++-.. | ++++..+.
T Consensus 194 dv~~------~g-------------------------s~l-----~P~fgl~glswG~frdi~~~----~--~KyWYfgp 231 (535)
T KOG4435|consen 194 DVTT------EG-------------------------STL-----APEFGLGGLSWGWFRDIEDT----R--KKYWYFGP 231 (535)
T ss_pred Eecc------CC-------------------------Ccc-----ccccccCccchhhhhhhhhh----h--hheeeecH
Confidence 6632 11 100 13477788888887766553 2 33444456
Q ss_pred CCcccccccccc
Q 020123 158 ISNKLIYSGYSC 169 (331)
Q Consensus 158 ~~~k~~Y~~~~~ 169 (331)
++.+.+|.+..+
T Consensus 232 lk~~aA~f~s~l 243 (535)
T KOG4435|consen 232 LKRRAAYFWSML 243 (535)
T ss_pred HHHHHHHHHHHH
Confidence 655555555433
No 24
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.90 E-value=0.00019 Score=67.54 Aligned_cols=56 Identities=18% Similarity=0.221 Sum_probs=39.9
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCc-chhhhcCCCCCCCCchHHHHHHHHHHHhCCCee
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGN-DLSRSFGWGGSFPFAWKSAVKRTLQRASAGPIC 75 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgN-dfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~ 75 (331)
.||++|||||+..+++.+.. . .+.++|.++|| .|...+.. .+ ++..++.+.+|...
T Consensus 66 ~vi~lGGDGT~L~aa~~~~~-------~--~~Pilgin~G~lGFl~~~~~-----~~----~~~~l~~i~~g~~~ 122 (292)
T PRK03378 66 LAIVVGGDGNMLGAARVLAR-------Y--DIKVIGINRGNLGFLTDLDP-----DN----ALQQLSDVLEGHYI 122 (292)
T ss_pred EEEEECCcHHHHHHHHHhcC-------C--CCeEEEEECCCCCcccccCH-----HH----HHHHHHHHHcCCce
Confidence 48999999999999988753 2 34588899999 88777642 13 34455556667653
No 25
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.63 E-value=0.00018 Score=67.23 Aligned_cols=57 Identities=23% Similarity=0.155 Sum_probs=44.1
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeee
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICR 76 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~ 76 (331)
.||++|||||+.++++ +.. .++|+..||.||. +|...+.. .+ +.+.++++.+|+...
T Consensus 60 ~vi~iGGDGTlL~a~~-~~~-------~~~pi~gIn~G~l-GFl~~~~~-----~~----~~~~l~~i~~g~~~~ 116 (277)
T PRK03708 60 FIIAIGGDGTILRIEH-KTK-------KDIPILGINMGTL-GFLTEVEP-----EE----TFFALSRLLEGDYFI 116 (277)
T ss_pred EEEEEeCcHHHHHHHH-hcC-------CCCeEEEEeCCCC-CccccCCH-----HH----HHHHHHHHHcCCceE
Confidence 4899999999999999 653 4789999999998 88887642 12 455666777787543
No 26
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.23 E-value=0.03 Score=51.71 Aligned_cols=42 Identities=12% Similarity=0.161 Sum_probs=33.2
Q ss_pred eeecEEEEEEcCCcceeceEEecCccccCCCCCCCceEEEEEeecccccccc
Q 020123 278 AQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMIS 329 (331)
Q Consensus 278 ~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~~~~~~~i~~~p~~~~~~~ 329 (331)
-+.++++|+++ ++..+++|||... ...+|+|+..|.+..+++
T Consensus 194 p~~~~I~I~~~----~~~~l~iDGe~~~------~~~~I~I~~s~~~l~li~ 235 (256)
T PRK14075 194 PSNEKVTVESQ----RDINLIVDGVLVG------KTNRITVKKSRRYVRILR 235 (256)
T ss_pred CCCCEEEEEEC----CceEEEECCCCcC------CCcEEEEEECCCEEEEEE
Confidence 35678888876 6789999999853 234799999999988875
No 27
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.68 E-value=0.0063 Score=57.66 Aligned_cols=66 Identities=17% Similarity=0.111 Sum_probs=43.6
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeec-CCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL-GTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSW 80 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~-GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~ 80 (331)
.|+++|||||+.++++.+.. .++|+..|.. |+-.=++.. +.+..+ +++++.+.+|+...-...
T Consensus 60 ~vi~~GGDGT~l~~~~~~~~-------~~~pv~gin~~G~lGFL~~~-------~~~~~~--~~~l~~i~~g~~~i~~r~ 123 (305)
T PRK02645 60 LAIVLGGDGTVLAAARHLAP-------HDIPILSVNVGGHLGFLTHP-------RDLLQD--ESVWDRLQEDRYAIERRM 123 (305)
T ss_pred EEEEECCcHHHHHHHHHhcc-------CCCCEEEEecCCcceEecCc-------hhhcch--HHHHHHHHcCCceEEEee
Confidence 58999999999999999864 5788888998 654444421 111111 456667778886644444
Q ss_pred EEE
Q 020123 81 HAV 83 (331)
Q Consensus 81 ~v~ 83 (331)
.++
T Consensus 124 ~L~ 126 (305)
T PRK02645 124 MLQ 126 (305)
T ss_pred EEE
Confidence 444
No 28
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.99 E-value=0.72 Score=42.78 Aligned_cols=48 Identities=13% Similarity=0.099 Sum_probs=32.1
Q ss_pred eeecEEEEEEcCCcceeceEEecCccccCCCCCCCceEEEEEeecccccccc
Q 020123 278 AQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMIS 329 (331)
Q Consensus 278 ~q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~~~~~~~i~~~p~~~~~~~ 329 (331)
-....++|+......+...+.+||+.....+ -..|+|+..|....+|+
T Consensus 202 ~~~~~I~i~~~~~~~~~~~l~~DG~~~~l~~----~d~i~I~~s~~~~~lv~ 249 (264)
T PRK03501 202 SHERKLTLKIVQDGNDYPIIGMDNEALSIKH----VEKIDIRLSDKQIKTVK 249 (264)
T ss_pred CCCCEEEEEEecCCCCcEEEEEeCCEEEcCC----CCEEEEEECCCEEEEEE
Confidence 3445677776521113567899999754333 46799999998888775
No 29
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=95.60 E-value=0.028 Score=52.63 Aligned_cols=65 Identities=28% Similarity=0.285 Sum_probs=41.8
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.||++|||||+-.++..+.. ..+|+--|+.||-|=|+. +. +.+. ..+++.+.+|+...-....
T Consensus 79 ~ii~lGGDGT~L~~~~~~~~-------~~~Pilgin~G~lgfl~~-~~-----~~~~----~~~l~~~~~g~~~~~~r~~ 141 (285)
T PF01513_consen 79 LIIVLGGDGTFLRAARLFGD-------YDIPILGINTGTLGFLTE-FE-----PEDI----EEALEKILAGEYSIEERMR 141 (285)
T ss_dssp EEEEEESHHHHHHHHHHCTT-------ST-EEEEEESSSSTSSSS-EE-----GCGH----HHHHHHHHHTHCEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHhcc-------CCCcEEeecCCCcccccc-CC-----HHHH----HHHHHHHhcCCeEEEEeee
Confidence 48999999999999998864 478999999998554443 32 2233 3444445556555444444
Q ss_pred EE
Q 020123 82 AV 83 (331)
Q Consensus 82 v~ 83 (331)
++
T Consensus 142 l~ 143 (285)
T PF01513_consen 142 LE 143 (285)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 30
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]
Probab=95.58 E-value=0.019 Score=54.43 Aligned_cols=55 Identities=35% Similarity=0.304 Sum_probs=40.2
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCC
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAG 72 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g 72 (331)
.|+.+|||||...|++++ . .++|+--||+||-|-+.-- -+ .|.. ..+++..+.++
T Consensus 103 lIvfaGGDGTarDVa~av-~-------~~vPvLGipaGvk~~Sgvf-A~------~P~~-aa~l~~~~lkg 157 (355)
T COG3199 103 LIVFAGGDGTARDVAEAV-G-------ADVPVLGIPAGVKNYSGVF-AL------SPED-AARLLGAFLKG 157 (355)
T ss_pred EEEEeCCCccHHHHHhhc-c-------CCCceEeeccccceecccc-cc------ChHH-HHHHHHHHhcc
Confidence 478999999999999998 3 5789999999998876411 11 2322 44566677777
No 31
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.46 E-value=0.078 Score=49.99 Aligned_cols=65 Identities=18% Similarity=0.216 Sum_probs=41.8
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.||++|||||+..+++.+.. .++|+--|..|+ +|+-..++ + +.++++++.+.+|..+.-....
T Consensus 65 ~vi~~GGDGt~l~~~~~~~~-------~~~Pvlgin~G~-------lGFl~~~~--~-~~~~~~l~~~~~g~~~i~~r~~ 127 (295)
T PRK01231 65 LVIVVGGDGSLLGAARALAR-------HNVPVLGINRGR-------LGFLTDIR--P-DELEFKLAEVLDGHYQEEERFL 127 (295)
T ss_pred EEEEEeCcHHHHHHHHHhcC-------CCCCEEEEeCCc-------ccccccCC--H-HHHHHHHHHHHcCCceEEEEEE
Confidence 48999999999999988853 466766677774 44432221 2 2355667777778755444444
Q ss_pred EE
Q 020123 82 AV 83 (331)
Q Consensus 82 v~ 83 (331)
++
T Consensus 128 L~ 129 (295)
T PRK01231 128 LE 129 (295)
T ss_pred EE
Confidence 44
No 32
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=95.07 E-value=0.12 Score=48.60 Aligned_cols=65 Identities=25% Similarity=0.204 Sum_probs=42.0
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.||++|||||+..+++.+.. .++|+--|-.|+- |+=.+++ + +.+.+.++.+.+|+...-....
T Consensus 66 ~vi~~GGDGt~l~~~~~~~~-------~~~pilGIn~G~l-------GFL~~~~--~-~~~~~~l~~~~~g~~~i~~r~~ 128 (291)
T PRK02155 66 LAVVLGGDGTMLGIGRQLAP-------YGVPLIGINHGRL-------GFITDIP--L-DDMQETLPPMLAGNYEEEERML 128 (291)
T ss_pred EEEEECCcHHHHHHHHHhcC-------CCCCEEEEcCCCc-------cccccCC--H-HHHHHHHHHHHcCCceEEEeEE
Confidence 58999999999999998863 4566555666654 4322211 2 2355667778888865544444
Q ss_pred EE
Q 020123 82 AV 83 (331)
Q Consensus 82 v~ 83 (331)
++
T Consensus 129 L~ 130 (291)
T PRK02155 129 LE 130 (291)
T ss_pred EE
Confidence 43
No 33
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=93.88 E-value=0.34 Score=45.67 Aligned_cols=65 Identities=20% Similarity=0.257 Sum_probs=42.1
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.||++|||||+-.++..+.. .++|+--|-.|+ ||+=..+ ++. .+++.++.+.+|+...-....
T Consensus 67 lvi~lGGDGT~L~aa~~~~~-------~~~PilGIN~G~-------lGFLt~~--~~~-~~~~~l~~i~~g~~~i~~r~~ 129 (292)
T PRK01911 67 MVISIGGDGTFLRTATYVGN-------SNIPILGINTGR-------LGFLATV--SKE-EIEETIDELLNGDYTIEERSL 129 (292)
T ss_pred EEEEECCcHHHHHHHHHhcC-------CCCCEEEEecCC-------CCccccc--CHH-HHHHHHHHHHcCCceEEEEee
Confidence 48999999999999988753 356655566665 6664332 222 256677778888865444444
Q ss_pred EE
Q 020123 82 AV 83 (331)
Q Consensus 82 v~ 83 (331)
++
T Consensus 130 L~ 131 (292)
T PRK01911 130 LQ 131 (292)
T ss_pred EE
Confidence 33
No 34
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=93.63 E-value=0.32 Score=45.88 Aligned_cols=64 Identities=22% Similarity=0.257 Sum_probs=40.9
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.||++|||||+-.++..+.. ..+|+--|-.|+ ||+=..++ + +.+...++.+.+|+...-....
T Consensus 71 ~vi~lGGDGT~L~aa~~~~~-------~~~PilGIN~G~-------lGFL~~~~--~-~~~~~~l~~i~~g~~~~~~r~~ 133 (296)
T PRK04539 71 LVAVLGGDGTFLSVAREIAP-------RAVPIIGINQGH-------LGFLTQIP--R-EYMTDKLLPVLEGKYLAEERIL 133 (296)
T ss_pred EEEEECCcHHHHHHHHHhcc-------cCCCEEEEecCC-------CeEeeccC--H-HHHHHHHHHHHcCCceEEEeee
Confidence 47999999999999988753 356655566665 66644322 2 2355566677778754433333
Q ss_pred E
Q 020123 82 A 82 (331)
Q Consensus 82 v 82 (331)
+
T Consensus 134 l 134 (296)
T PRK04539 134 I 134 (296)
T ss_pred E
Confidence 3
No 35
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=93.51 E-value=0.39 Score=45.54 Aligned_cols=60 Identities=20% Similarity=0.231 Sum_probs=40.0
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeee
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLD 78 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iD 78 (331)
.||++|||||+-.++..+.. ..+|+--|..|+ ||+=.+++ + +.+..+++.+.+|+..--.
T Consensus 75 ~vi~lGGDGT~L~aar~~~~-------~~~PilGIN~G~-------lGFL~~~~--~-~~~~~~l~~i~~g~y~i~~ 134 (306)
T PRK03372 75 LVLVLGGDGTILRAAELARA-------ADVPVLGVNLGH-------VGFLAEAE--A-EDLDEAVERVVDRDYRVEE 134 (306)
T ss_pred EEEEEcCCHHHHHHHHHhcc-------CCCcEEEEecCC-------CceeccCC--H-HHHHHHHHHHHcCCceEEE
Confidence 48999999999999988754 466777788886 44432221 2 2245566677778765433
No 36
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=93.12 E-value=0.58 Score=43.98 Aligned_cols=63 Identities=19% Similarity=0.160 Sum_probs=39.4
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.||++|||||+-.++..+.. ..+|+--|-.|+ ||+=..++ + +.+++.++++.+|+...-....
T Consensus 67 lvi~iGGDGT~L~aa~~~~~-------~~~PilGIN~G~-------lGFLt~~~--~-~~~~~~l~~i~~g~y~ie~r~~ 129 (287)
T PRK14077 67 FLISLGGDGTLISLCRKAAE-------YDKFVLGIHAGH-------LGFLTDIT--V-DEAEKFFQAFFQGEFEIEKPYM 129 (287)
T ss_pred EEEEECCCHHHHHHHHHhcC-------CCCcEEEEeCCC-------cccCCcCC--H-HHHHHHHHHHHcCCCeEEEEEE
Confidence 47899999999999987753 356654456664 56533222 2 2355667777788754333333
No 37
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=92.75 E-value=0.63 Score=44.13 Aligned_cols=58 Identities=22% Similarity=0.258 Sum_probs=37.7
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeee
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICR 76 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~ 76 (331)
.+|++|||||+-.++..+.. ..+|+--|-.|+ ||+=..+ ++. .+.+.++.+.+|+..-
T Consensus 71 lvi~iGGDGTlL~aar~~~~-------~~iPilGIN~G~-------lGFLt~~--~~~-~~~~~l~~l~~g~y~i 128 (305)
T PRK02649 71 FAIVLGGDGTVLSAARQLAP-------CGIPLLTINTGH-------LGFLTEA--YLN-QLDEAIDQVLAGQYTI 128 (305)
T ss_pred EEEEEeCcHHHHHHHHHhcC-------CCCcEEEEeCCC-------CcccccC--CHH-HHHHHHHHHHcCCcEE
Confidence 47999999999999988753 355654456664 5653222 122 3566677777787543
No 38
>PLN02929 NADH kinase
Probab=91.91 E-value=0.96 Score=42.75 Aligned_cols=71 Identities=18% Similarity=0.168 Sum_probs=44.7
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCC---------Ccch--hhhcCCCCCCCCchHHHHHHHHHHHh
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT---------GNDL--SRSFGWGGSFPFAWKSAVKRTLQRAS 70 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GT---------gNdf--Ar~lg~~~~~~~~~~~a~~~~l~~i~ 70 (331)
.||++|||||+-.++..+ . ..+|+-=|-.|+ .|.| .|++|+=... ++ +.+.+.++++.
T Consensus 67 lvi~lGGDGT~L~aa~~~-~-------~~iPvlGIN~Gp~~~~~~~~~~~~~~~~r~lGfL~~~--~~-~~~~~~L~~il 135 (301)
T PLN02929 67 LVVAVGGDGTLLQASHFL-D-------DSIPVLGVNSDPTQKDEVEEYSDEFDARRSTGHLCAA--TA-EDFEQVLDDVL 135 (301)
T ss_pred EEEEECCcHHHHHHHHHc-C-------CCCcEEEEECCCcccccccccccccccccCccccccC--CH-HHHHHHHHHHH
Confidence 489999999999999877 4 345544455563 1333 4578874432 22 33667777888
Q ss_pred CCCeeeeeEEEEE
Q 020123 71 AGPICRLDSWHAV 83 (331)
Q Consensus 71 ~g~~~~iDi~~v~ 83 (331)
+|+...-..-.++
T Consensus 136 ~g~~~~~~r~~L~ 148 (301)
T PLN02929 136 FGRLKPTELSRIS 148 (301)
T ss_pred cCCceEEEeeeEE
Confidence 8876554444443
No 39
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=91.86 E-value=1.2 Score=41.44 Aligned_cols=48 Identities=13% Similarity=0.077 Sum_probs=30.7
Q ss_pred eeecEEEEEEcCCcceeceEEecCccc-cCCCCCCCceEEEEEeecccccccc
Q 020123 278 AQAAAIRLEFRGGEWKDAFMQMDGEPW-KQPLNRDYSTFVEIKRVPFQSLMIS 329 (331)
Q Consensus 278 ~q~~~v~i~~~~~~~~~~~~qiDGE~~-~~~p~~~~~~~~~i~~~p~~~~~~~ 329 (331)
-....++|+......+...+.+||... ...+ -..|+|+..+....+|+
T Consensus 204 ~~~~~I~i~~~~~~~~~~~l~~DG~~~~~l~~----~d~v~I~~s~~~~~lv~ 252 (272)
T PRK02231 204 DGDSKISLRFAEYNTPQLEVSCDSQIALPFTP----DDRVHVQKSPDKLRLLH 252 (272)
T ss_pred CCCCEEEEEEcCCCCccEEEEECCCeEEEeCC----CcEEEEEEcCCEEEEEE
Confidence 344567777642111357899999974 3222 34689998888777764
No 40
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=91.37 E-value=1.5 Score=40.64 Aligned_cols=50 Identities=18% Similarity=0.204 Sum_probs=31.0
Q ss_pred eeeecEEEEEEcCC--cceeceEEecCccccCCCCCCCceEEEEEeeccccc-ccc
Q 020123 277 IAQAAAIRLEFRGG--EWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSL-MIS 329 (331)
Q Consensus 277 l~q~~~v~i~~~~~--~~~~~~~qiDGE~~~~~p~~~~~~~~~i~~~p~~~~-~~~ 329 (331)
+-....++|+.... ..++..+.+||+..... .....|+|+..+.... +++
T Consensus 189 l~~~~~I~i~~~~~~~~~~~~~l~~DG~~~~~l---~~~d~v~i~~s~~~~~~~v~ 241 (259)
T PRK00561 189 LPIDTKVEFEIKKAFDHDQFPRFYADGAKLRLG---NSDTTIEISLVRSQAMFVAS 241 (259)
T ss_pred ECCCCEEEEEEccCCCCCCcEEEEEcCCeeecC---CCCCEEEEEEcCccceEEEE
Confidence 34455677776421 11356789999996432 1246789988887766 443
No 41
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=90.38 E-value=1.3 Score=44.63 Aligned_cols=58 Identities=33% Similarity=0.616 Sum_probs=37.3
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeee
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICR 76 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~ 76 (331)
.||++|||||+-.++..+.. ..+|+--|-.|+ ||+=..+ ++ +.++..++.+.+|...-
T Consensus 265 lVIsiGGDGTlL~Aar~~~~-------~~iPILGIN~G~-------LGFLt~i--~~-~e~~~~Le~il~G~y~I 322 (508)
T PLN02935 265 LVITLGGDGTVLWAASMFKG-------PVPPVVPFSMGS-------LGFMTPF--HS-EQYRDCLDAILKGPISI 322 (508)
T ss_pred EEEEECCcHHHHHHHHHhcc-------CCCcEEEEeCCC-------cceeccc--CH-HHHHHHHHHHHcCCceE
Confidence 48999999999999988753 345654455553 5542222 12 23566777788887543
No 42
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=89.82 E-value=2.1 Score=39.77 Aligned_cols=45 Identities=13% Similarity=0.010 Sum_probs=31.6
Q ss_pred eecEEEEEEcCCcceeceEEecCccccCCCCCCCceEEEEEeecccccccc
Q 020123 279 QAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMIS 329 (331)
Q Consensus 279 q~~~v~i~~~~~~~~~~~~qiDGE~~~~~p~~~~~~~~~i~~~p~~~~~~~ 329 (331)
....++|+... .++..+.+||...... ....|+|+..+....+|+
T Consensus 202 ~~~~I~i~~~~--~~~~~l~~DG~~~~l~----~~d~i~i~~s~~~~~li~ 246 (265)
T PRK04885 202 KHHTITLKPVN--DDDYQITVDHLTIKHK----NVKSIEYRVANEKIRFAR 246 (265)
T ss_pred CCCEEEEEEcC--CCcEEEEECCCEeecC----CCCEEEEEECCceEEEEE
Confidence 44567777643 2567899999984332 246799999998887775
No 43
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=89.69 E-value=0.48 Score=43.49 Aligned_cols=32 Identities=31% Similarity=0.294 Sum_probs=24.1
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCC
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 40 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GT 40 (331)
.|+++|||||+-.++..+.. ..+|+--|-.|+
T Consensus 28 lvi~iGGDGTlL~a~~~~~~-------~~~PvlGIN~G~ 59 (246)
T PRK04761 28 VIVALGGDGFMLQTLHRYMN-------SGKPVYGMNRGS 59 (246)
T ss_pred EEEEECCCHHHHHHHHHhcC-------CCCeEEEEeCCC
Confidence 48999999999999988754 356655566664
No 44
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=88.77 E-value=2.1 Score=44.19 Aligned_cols=58 Identities=26% Similarity=0.362 Sum_probs=39.1
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeee
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICR 76 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~ 76 (331)
.||++|||||+=.++..+.. ..+|+--|-+|+ ||+=..+ ++. .+.+.++.+.+|+..-
T Consensus 351 lvi~lGGDGT~L~aa~~~~~-------~~~PilGin~G~-------lGFL~~~--~~~-~~~~~l~~~~~g~~~i 408 (569)
T PRK14076 351 HIISIGGDGTVLRASKLVNG-------EEIPIICINMGT-------VGFLTEF--SKE-EIFKAIDSIISGEYEI 408 (569)
T ss_pred EEEEECCcHHHHHHHHHhcC-------CCCCEEEEcCCC-------CCcCccc--CHH-HHHHHHHHHHcCCceE
Confidence 48999999999999988753 456766677776 5553322 222 2556677777887543
No 45
>COG0061 nadF NAD kinase [Coenzyme metabolism]
Probab=86.12 E-value=5.3 Score=37.34 Aligned_cols=66 Identities=26% Similarity=0.297 Sum_probs=43.5
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeEEE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWH 81 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi~~ 81 (331)
.|++.|||||+-.+++.+.. ..+|+--|=.| .||+=.+++ .+.++++++++.+++.+-.....
T Consensus 58 ~ivvlGGDGtlL~~~~~~~~-------~~~pilgin~G-------~lGFLt~~~---~~~~~~~~~~~~~~~~~~~~r~~ 120 (281)
T COG0061 58 LIVVLGGDGTLLRAARLLAR-------LDIPVLGINLG-------HLGFLTDFE---PDELEKALDALLEGEYRIEERLL 120 (281)
T ss_pred EEEEeCCcHHHHHHHHHhcc-------CCCCEEEEeCC-------CcccccccC---HHHHHHHHHHHhcCceEEEEeEE
Confidence 58999999999999998864 34565555555 356633322 23467777777777766555555
Q ss_pred EEE
Q 020123 82 AVI 84 (331)
Q Consensus 82 v~~ 84 (331)
++.
T Consensus 121 l~~ 123 (281)
T COG0061 121 LEV 123 (281)
T ss_pred EEE
Confidence 543
No 46
>PLN02727 NAD kinase
Probab=82.69 E-value=3 Score=44.98 Aligned_cols=56 Identities=27% Similarity=0.435 Sum_probs=37.1
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCe
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPI 74 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~ 74 (331)
.||++|||||+=.++..+.. ..+|+--|-+| .||+=.++ ++.+ +++.+..+.+|..
T Consensus 746 LVIvLGGDGTlLrAar~~~~-------~~iPILGINlG-------rLGFLTdi--~~ee-~~~~L~~Il~G~y 801 (986)
T PLN02727 746 FVACLGGDGVILHASNLFRG-------AVPPVVSFNLG-------SLGFLTSH--YFED-FRQDLRQVIHGNN 801 (986)
T ss_pred EEEEECCcHHHHHHHHHhcC-------CCCCEEEEeCC-------CccccccC--CHHH-HHHHHHHHHcCCc
Confidence 47999999999999988754 45676667777 46663322 2322 4455666666664
No 47
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=82.55 E-value=8 Score=36.04 Aligned_cols=45 Identities=20% Similarity=0.280 Sum_probs=30.9
Q ss_pred eecEEEEEEcCCcceeceEEecCccc-cCCCCCCCceEEEEEeecccccccc
Q 020123 279 QAAAIRLEFRGGEWKDAFMQMDGEPW-KQPLNRDYSTFVEIKRVPFQSLMIS 329 (331)
Q Consensus 279 q~~~v~i~~~~~~~~~~~~qiDGE~~-~~~p~~~~~~~~~i~~~p~~~~~~~ 329 (331)
....++|+... .++..+.+||+.. ...+ ...|+|+..+....+|+
T Consensus 207 ~~~~I~i~~~~--~~~~~l~~DG~~~~~l~~----~d~i~i~~s~~~~~~v~ 252 (271)
T PRK01185 207 SESTVEIKIAG--DQSSLLILDGQYEYKISK----GDTVEISKSENYARFIS 252 (271)
T ss_pred CCCEEEEEEcC--CCCEEEEECCCceEecCC----CCEEEEEECCCeeEEEE
Confidence 34467776643 2577899999964 3333 34699999988877775
No 48
>PF10254 Pacs-1: PACS-1 cytosolic sorting protein; InterPro: IPR019381 PACS-1 is a cytosolic sorting protein that directs the localisation of membrane proteins in the trans-Golgi network (TGN)/endosomal system. PACS-1 connects the clathrin adaptor AP-1 to acidic cluster sorting motifs contained in the cytoplasmic domain of cargo proteins such as furin, the cation-independent mannose-6-phosphate receptor and in viral proteins such as human immunodeficiency virus type 1 Nef [].
Probab=76.65 E-value=3 Score=41.03 Aligned_cols=49 Identities=27% Similarity=0.412 Sum_probs=36.5
Q ss_pred CEEEEEcCchhHHHHHHHhhhhcc-CCCC--CCCcEEEeecCCCcchhhhcCC
Q 020123 1 MRIVVAGGDGTVGWVLGSVGELNK-QGRE--PVPPVAIIPLGTGNDLSRSFGW 50 (331)
Q Consensus 1 ~~viv~GGDGTl~~vvn~l~~~~~-~~~~--~~~~lgiiP~GTgNdfAr~lg~ 50 (331)
++|+++|||-=++.|+....+.=- +-++ .-.-+-+||+|+ |.+||.||-
T Consensus 77 vKV~v~G~~~y~~~VLr~yVE~Ls~K~~dWl~~~rFlvIPlGs-~~varyLgs 128 (414)
T PF10254_consen 77 VKVAVAGGQSYLSAVLRAYVEQLSHKPPDWLNYLRFLVIPLGS-HPVARYLGS 128 (414)
T ss_pred eEEEEEccHHHHHHHHHHHHHHhccCCcccccceeEEEecCCC-CHHHHHHhc
Confidence 579999999999999988764310 0011 234589999997 999999975
No 49
>KOG4180 consensus Predicted kinase [General function prediction only]
Probab=64.19 E-value=4 Score=38.76 Aligned_cols=71 Identities=18% Similarity=0.266 Sum_probs=45.0
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEe--ecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCeeeeeE
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAII--PLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDS 79 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgii--P~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~~~iDi 79 (331)
.||-+|||||+-.++.-+.. ...+.+|+= |.|+--.++-. ..+|..+.+|+. ++..|.-+.+-.
T Consensus 108 ~VisvGGDGTfL~Aasrv~~------~~~PViGvNtDP~~Seg~lcL~----~~~~~n~~~al~----k~~sgnF~wv~r 173 (395)
T KOG4180|consen 108 MVISVGGDGTFLLAASRVID------DSKPVIGVNTDPTGSEGHLCLP----DKYPSNPAGALC----KLTSGNFEWVLR 173 (395)
T ss_pred EEEEecCccceeehhhhhhc------cCCceeeecCCCCcCcceEecc----ccCCCCcHHHHH----HHHhccHHHhhh
Confidence 48899999999888886664 245666663 66665555543 334445555555 455677766655
Q ss_pred EEEEEec
Q 020123 80 WHAVIQM 86 (331)
Q Consensus 80 ~~v~~~~ 86 (331)
-+|+.+.
T Consensus 174 ~rir~tv 180 (395)
T KOG4180|consen 174 QRIRGTV 180 (395)
T ss_pred heeEEEE
Confidence 5555543
No 50
>KOG2178 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=61.88 E-value=9.5 Score=37.20 Aligned_cols=56 Identities=34% Similarity=0.494 Sum_probs=38.9
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhCCCe
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPI 74 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~g~~ 74 (331)
.||..||||||=-+.+.+.+ .-+|+--+-.| +||+=..+ +.+..++.+..+.+++.
T Consensus 171 ~iItLGGDGTvL~aS~LFq~-------~VPPV~sFslG-------slGFLtpf---~f~~f~~~l~~v~~~~~ 226 (409)
T KOG2178|consen 171 LIITLGGDGTVLYASSLFQR-------SVPPVLSFSLG-------SLGFLTPF---PFANFQEQLARVLNGRA 226 (409)
T ss_pred EEEEecCCccEEEehhhhcC-------CCCCeEEeecC-------Cccccccc---cHHHHHHHHHHHhcCcc
Confidence 37899999999888876653 45676666666 57775433 34456777777777773
No 51
>PF12219 End_tail_spike: Catalytic domain of bacteriophage endosialidase; InterPro: IPR024430 This entry represents the C-terminal domain of endosialidases which is approximately 160 amino acids in length. There are two conserved sequence motifs: VSR and YGA. The endosialidase protein forms homotrimeric molecules and this domain complexes into a tail-spike stalk. The stalk region folds in a triple beta-helix that is interrupted by a small triple beta-prism domain. The tail-spike is a multifunctional protein device used by the phage to fulfil the following functions: (i) to adsorb to the bacterial polySia capsule (ii) to de-polymerise the capsule to gain access to the outer bacterial membrane, and finally (iii) to mediate tight adhesion to the membrane, a prerequisite for the initiation of the infection cycle [].; PDB: 3JU4_A 3GW6_A 3GVL_A 3GVK_B 3GVJ_A 1V0E_B 1V0F_E.
Probab=48.42 E-value=10 Score=31.37 Aligned_cols=12 Identities=50% Similarity=1.096 Sum_probs=10.0
Q ss_pred EEEEEcCchhHH
Q 020123 2 RIVVAGGDGTVG 13 (331)
Q Consensus 2 ~viv~GGDGTl~ 13 (331)
|+|++|||||=+
T Consensus 87 RlIvsGGegtss 98 (160)
T PF12219_consen 87 RLIVSGGEGTSS 98 (160)
T ss_dssp EEEEESSSSSSG
T ss_pred EEEEeCCCCccc
Confidence 789999999854
No 52
>PTZ00286 6-phospho-1-fructokinase; Provisional
Probab=48.04 E-value=39 Score=33.99 Aligned_cols=48 Identities=35% Similarity=0.467 Sum_probs=33.1
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchh---hhcCCC
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGWG 51 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfA---r~lg~~ 51 (331)
.++++|||||+..+....-...+ ...++++--||-==-||+. +++|+.
T Consensus 179 ~L~vIGGdgT~~~A~~L~ee~~~--~g~~I~VIGIPKTIDNDI~~td~S~GFd 229 (459)
T PTZ00286 179 ILFTLGGDGTHRGALAIYKELRR--RKLNISVVGIPKTIDNDIPIIDESFGFQ 229 (459)
T ss_pred EEEEeCCchHHHHHHHHHHHHHH--hCCCceEEEeccccCCCCCCcccCcCch
Confidence 47899999999876533221110 1245888999998899987 677774
No 53
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=43.64 E-value=38 Score=32.36 Aligned_cols=41 Identities=34% Similarity=0.634 Sum_probs=30.6
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchh---hhcCC
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 50 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfA---r~lg~ 50 (331)
.++++|||||+..+. .|.+ ...++--||.==-||+. .++|+
T Consensus 97 ~LivIGGdgS~~~a~-~L~~-------~gi~vigiPkTIDNDl~gtd~tiGf 140 (324)
T TIGR02483 97 ALIAIGGDGTLGIAR-RLAD-------KGLPVVGVPKTIDNDLEATDYTFGF 140 (324)
T ss_pred EEEEECCchHHHHHH-HHHh-------cCCCEEeeccccCCCCcCCccCcCH
Confidence 378999999997554 5543 34788889988899997 35555
No 54
>PLN02564 6-phosphofructokinase
Probab=39.94 E-value=53 Score=33.26 Aligned_cols=47 Identities=34% Similarity=0.483 Sum_probs=30.3
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchh---hhcCC
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 50 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfA---r~lg~ 50 (331)
.++++|||||+.-+....-...+ ...++++--||-==-||+. +++|+
T Consensus 179 ~LivIGGDGS~~gA~~L~e~~~~--~g~~i~VIGIPKTIDNDI~~tD~T~GF 228 (484)
T PLN02564 179 QVYIIGGDGTQKGASVIYEEIRR--RGLKVAVAGIPKTIDNDIPVIDKSFGF 228 (484)
T ss_pred EEEEECCchHHHHHHHHHHHHHH--cCCCceEEEecccccCCCcCcccCCCH
Confidence 47899999999876543211110 0234557888988899987 45555
No 55
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=39.50 E-value=54 Score=32.84 Aligned_cols=48 Identities=33% Similarity=0.448 Sum_probs=32.0
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchh---hhcCCC
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGWG 51 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfA---r~lg~~ 51 (331)
.++++|||||+..+.. |.+.-. ....++++--||-==-||+. +++|+.
T Consensus 175 ~L~vIGGdgT~~gA~~-l~ee~~-~~g~~I~VIGIPKTIDNDi~~td~S~GFd 225 (443)
T PRK06830 175 ILFVIGGDGTLRGASA-IAEEIE-RRGLKISVIGIPKTIDNDINFIQKSFGFE 225 (443)
T ss_pred EEEEeCCchHHHHHHH-HHHHHH-HhCCCceEEEeccccCCCCcCcccCCCHH
Confidence 4789999999987654 332100 01245788888988899987 566663
No 56
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=36.80 E-value=62 Score=30.86 Aligned_cols=36 Identities=31% Similarity=0.406 Sum_probs=29.0
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchh
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 45 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfA 45 (331)
.++++|||||+..+. .|.+ ...++--||-==-||+.
T Consensus 95 ~Li~IGGdgs~~~a~-~L~e-------~~i~vigiPkTIDNDi~ 130 (317)
T cd00763 95 ALVVIGGDGSYMGAM-RLTE-------HGFPCVGLPGTIDNDIP 130 (317)
T ss_pred EEEEECCchHHHHHH-HHHH-------cCCCEEEecccccCCCC
Confidence 378999999998765 4543 36889999998899988
No 57
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=33.83 E-value=80 Score=29.89 Aligned_cols=38 Identities=34% Similarity=0.392 Sum_probs=29.2
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhh
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 46 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr 46 (331)
.++++|||||+..+. .|.+ ....++--||.=--||+.-
T Consensus 94 ~Li~IGGdgs~~~a~-~L~e------~~~i~vigiPkTIDNDl~~ 131 (301)
T TIGR02482 94 GLVVIGGDGSYTGAQ-KLYE------EGGIPVIGLPGTIDNDIPG 131 (301)
T ss_pred EEEEeCCchHHHHHH-HHHH------hhCCCEEeecccccCCCcC
Confidence 478999999997765 4443 1367888899999999874
No 58
>PRK00536 speE spermidine synthase; Provisional
Probab=31.83 E-value=32 Score=31.88 Aligned_cols=16 Identities=19% Similarity=0.204 Sum_probs=12.4
Q ss_pred EEEEEcCc-hhHHHHHH
Q 020123 2 RIVVAGGD-GTVGWVLG 17 (331)
Q Consensus 2 ~viv~GGD-GTl~~vvn 17 (331)
++|+.||| ||+.||+.
T Consensus 76 VLIiGGGDGg~~REvLk 92 (262)
T PRK00536 76 VLIVDGFDLELAHQLFK 92 (262)
T ss_pred EEEEcCCchHHHHHHHC
Confidence 46788899 68888875
No 59
>PRK14072 6-phosphofructokinase; Provisional
Probab=30.98 E-value=98 Score=30.71 Aligned_cols=47 Identities=26% Similarity=0.297 Sum_probs=30.7
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchh---hhcCC
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 50 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfA---r~lg~ 50 (331)
.+|++|||||+..+.. |.+.-.+ ...++++--||-==-||+. .++|+
T Consensus 106 ~LivIGGdgS~~~a~~-L~e~~~~-~g~~i~vIgIPkTIDNDl~gtD~t~GF 155 (416)
T PRK14072 106 YFFYNGGNDSMDTALK-VSQLAKK-MGYPIRCIGIPKTIDNDLPGTDHCPGF 155 (416)
T ss_pred EEEEECChHHHHHHHH-HHHHHHH-hCCCceEEEeeecccCCCCCCCCCCCh
Confidence 4789999999987653 3321000 0235788889977799998 44454
No 60
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=30.90 E-value=88 Score=30.05 Aligned_cols=41 Identities=27% Similarity=0.214 Sum_probs=28.6
Q ss_pred EEEEEcCchhHHHHHHHhhhh-ccCCCCCCCcEEEeecCCCcchh
Q 020123 2 RIVVAGGDGTVGWVLGSVGEL-NKQGREPVPPVAIIPLGTGNDLS 45 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~-~~~~~~~~~~lgiiP~GTgNdfA 45 (331)
.++++|||||+..+.. |.+. .+ ...++++--||-==-||+.
T Consensus 95 ~Lv~IGGd~s~~~a~~-L~e~~~~--~~~~i~vigiPkTIDNDl~ 136 (338)
T cd00363 95 ALVVIGGDGSYTGADL-LTEEWPS--KYQGFNVIGLPGTIDNDIK 136 (338)
T ss_pred EEEEeCCHHHHHHHHH-HHHHHHh--cCCCccEEEeeecccCCCc
Confidence 4789999999987653 3221 11 1246889999977789987
No 61
>COG1691 NCAIR mutase (PurE)-related proteins [General function prediction only]
Probab=30.85 E-value=50 Score=30.02 Aligned_cols=31 Identities=35% Similarity=0.502 Sum_probs=25.4
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCC
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTG 41 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTg 41 (331)
.|+++|-||+|-.|+++|. ++|.--+|.-+|
T Consensus 176 lIVvAGMEGaLPsvvagLv---------D~PVIavPTsVG 206 (254)
T COG1691 176 LIVVAGMEGALPSVVAGLV---------DVPVIAVPTSVG 206 (254)
T ss_pred EEEEcccccchHHHHHhcc---------CCCeEecccccc
Confidence 5899999999999999997 356666787654
No 62
>PRK14071 6-phosphofructokinase; Provisional
Probab=28.34 E-value=1.1e+02 Score=29.75 Aligned_cols=43 Identities=26% Similarity=0.404 Sum_probs=30.6
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchh---hhcCCC
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGWG 51 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfA---r~lg~~ 51 (331)
.++++|||||+.- +..|.+. ..+++--||-==-||+. .++|+.
T Consensus 110 ~Li~IGGdgS~~~-a~~L~~~------~~i~vIgiPkTIDNDl~~td~t~Gf~ 155 (360)
T PRK14071 110 ALIGIGGDGSLAI-LRRLAQQ------GGINLVGIPKTIDNDVGATEVSIGFD 155 (360)
T ss_pred EEEEECChhHHHH-HHHHHHh------cCCcEEEecccccCCCcCcccCcChh
Confidence 3789999999864 4455431 26788889987789985 355553
No 63
>PLN02884 6-phosphofructokinase
Probab=26.73 E-value=1.2e+02 Score=30.06 Aligned_cols=47 Identities=26% Similarity=0.421 Sum_probs=30.8
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchh---hhcCC
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 50 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfA---r~lg~ 50 (331)
.++++|||||+.-+.. |.+.-.. ...++++--||-==-||+. .++|+
T Consensus 146 ~LivIGGdgS~~~a~~-L~~~~~~-~g~~i~vIGIPkTIDNDi~~tD~TiGF 195 (411)
T PLN02884 146 MLFVLGGNGTHAGANA-IHNECRK-RKMKVSVVGVPKTIDNDILLMDKTFGF 195 (411)
T ss_pred EEEEECCchHHHHHHH-HHHHHHH-cCCCceEEeccccccCCCcCcccCCCH
Confidence 4789999999986653 3321000 0235788889988899986 34555
No 64
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=23.71 E-value=52 Score=30.76 Aligned_cols=38 Identities=32% Similarity=0.412 Sum_probs=29.7
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhh
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 46 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr 46 (331)
.++++|||||+..+ +.|.+. ..+++-.||-==-||+.-
T Consensus 95 ~Li~IGG~gs~~~a-~~L~~~------~~i~vigiPkTIDNDi~g 132 (282)
T PF00365_consen 95 ALIVIGGDGSMKGA-HKLSEE------FGIPVIGIPKTIDNDIPG 132 (282)
T ss_dssp EEEEEESHHHHHHH-HHHHHH------HHSEEEEEEEETTSSCTT
T ss_pred EEEEecCCCHHHHH-HHHHhc------CceEEEEEeccccCCcCC
Confidence 47899999998776 456532 247999999988899885
No 65
>PF12124 Nsp3_PL2pro: Coronavirus polyprotein cleavage domain; InterPro: IPR022733 This domain is found in SARS coronaviruses, and is about 70 amino acids in length. It is found associated with various other coronavirus proteins due to the polyprotein nature of most viral translation. PL2pro is a domain of the non-structural protein nsp3. The domain performs three of the cleavages required to separate the translated polyprotein into its distinct proteins. ; GO: 0004197 cysteine-type endopeptidase activity, 0008242 omega peptidase activity, 0016740 transferase activity, 0016788 hydrolase activity, acting on ester bonds, 0016817 hydrolase activity, acting on acid anhydrides; PDB: 2KAF_A 2KQW_A.
Probab=23.71 E-value=78 Score=21.83 Aligned_cols=25 Identities=20% Similarity=0.124 Sum_probs=15.9
Q ss_pred eeecEEEEEEcCCcceeceEEecCcccc
Q 020123 278 AQAAAIRLEFRGGEWKDAFMQMDGEPWK 305 (331)
Q Consensus 278 ~q~~~v~i~~~~~~~~~~~~qiDGE~~~ 305 (331)
.++..+..+.- +.++.+++|||.+.
T Consensus 33 krgdkivyht~---~~~iefh~~gevl~ 57 (66)
T PF12124_consen 33 KRGDKIVYHTV---ENPIEFHMDGEVLP 57 (66)
T ss_dssp EETTEEEEE-S---SSS--EEETTEEE-
T ss_pred hcCCEEEEEec---CCceEEEecCcEee
Confidence 46667766654 37899999999863
No 66
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=23.20 E-value=1.2e+02 Score=32.58 Aligned_cols=43 Identities=16% Similarity=0.279 Sum_probs=29.6
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchh
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 45 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfA 45 (331)
.++++|||||+..+.. |.+.....+...+++-.||.==-||+.
T Consensus 481 ~LivIGGdgs~~~a~~-L~~~~~~~~~~~i~vvgIPkTIDNDi~ 523 (745)
T TIGR02478 481 GLLIIGGFEAFEALLQ-LEQAREKYPAFRIPMVVIPATISNNVP 523 (745)
T ss_pred EEEEeCChHHHHHHHH-HHHHHhhCCCCCccEEEecccccCCCC
Confidence 3789999999986653 332111111246889999999999997
No 67
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated
Probab=21.88 E-value=1.4e+02 Score=29.54 Aligned_cols=41 Identities=20% Similarity=0.163 Sum_probs=28.6
Q ss_pred EEEEEcCchhHHHHHHHhhhh-ccCCCCCCCcEEEeecCCCcchh
Q 020123 2 RIVVAGGDGTVGWVLGSVGEL-NKQGREPVPPVAIIPLGTGNDLS 45 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~-~~~~~~~~~~lgiiP~GTgNdfA 45 (331)
.++++|||||+.-+.. |.+. .+ ....+++--||-==-||+.
T Consensus 115 ~Li~IGGdgS~~~a~~-L~~~~~~--~g~~i~vvgIPkTIDNDl~ 156 (403)
T PRK06555 115 ILHTIGGDDTNTTAAD-LAAYLAE--NGYDLTVVGLPKTIDNDVV 156 (403)
T ss_pred EEEEECChhHHHHHHH-HHHHHHH--hCCCceEEEeeeeeeCCCC
Confidence 3789999999987753 3221 10 0236888899988889986
No 68
>COG1013 PorB Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion]
Probab=21.55 E-value=98 Score=29.17 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=23.2
Q ss_pred EEEEEcCch-hHHHHHHHhhhhccCCCCCCCcEEEeecC
Q 020123 2 RIVVAGGDG-TVGWVLGSVGELNKQGREPVPPVAIIPLG 39 (331)
Q Consensus 2 ~viv~GGDG-Tl~~vvn~l~~~~~~~~~~~~~lgiiP~G 39 (331)
.||+.|||| +...-.|++...- ..+.-+-+|=+-
T Consensus 90 ~Viv~gGDG~~~dIG~~~l~h~~----~Rn~dit~iv~D 124 (294)
T COG1013 90 SVIVIGGDGDAYDIGGNHLIHAL----RRNHDITYIVVD 124 (294)
T ss_pred eEEEEecchhHhhhhhHHHHHHH----HcCCCeEEEEEC
Confidence 689999999 8888888887542 133445555443
No 69
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=21.27 E-value=1.2e+02 Score=25.69 Aligned_cols=28 Identities=32% Similarity=0.446 Sum_probs=22.2
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEee
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIP 37 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP 37 (331)
.|++-||=||+.|+...+.. +.|+.+++
T Consensus 95 ~IvlpGG~GTL~E~~~a~~~--------~kpv~~l~ 122 (159)
T TIGR00725 95 VVSVGGGYGTAIEILGAYAL--------GGPVVVLR 122 (159)
T ss_pred EEEcCCchhHHHHHHHHHHc--------CCCEEEEE
Confidence 46778999999999998863 45777777
No 70
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=20.92 E-value=2.7e+02 Score=23.35 Aligned_cols=58 Identities=21% Similarity=0.294 Sum_probs=36.4
Q ss_pred EEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhhhcCCCCCCCCchHHHHHHHHHHHhC
Q 020123 3 IVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASA 71 (331)
Q Consensus 3 viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr~lg~~~~~~~~~~~a~~~~l~~i~~ 71 (331)
-+.++|+- ..+++..+... ...++.+-+|=+| +||+.+... +.+..+.+.++++.+.+
T Consensus 45 n~g~~G~t-~~~~~~~l~~~----~~~~pd~Vii~~G-~ND~~~~~~-----~~~~~~~l~~li~~i~~ 102 (191)
T cd01836 45 LFAKTGAT-SADLLRQLAPL----PETRFDVAVISIG-VNDVTHLTS-----IARWRKQLAELVDALRA 102 (191)
T ss_pred EEecCCcC-HHHHHHHHHhc----ccCCCCEEEEEec-ccCcCCCCC-----HHHHHHHHHHHHHHHHh
Confidence 45678884 45666655431 1246678899999 799876321 12345667777777665
No 71
>PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins. It is named after the characteristic PEGA sequence motif found in this domain. The secondary structure of this domain is predicted to be beta-strands.
Probab=20.79 E-value=1.6e+02 Score=20.69 Aligned_cols=16 Identities=19% Similarity=0.096 Sum_probs=9.6
Q ss_pred eeceEEecCccccCCC
Q 020123 293 KDAFMQMDGEPWKQPL 308 (331)
Q Consensus 293 ~~~~~qiDGE~~~~~p 308 (331)
....+.+||+.....|
T Consensus 11 ~gA~V~vdg~~~G~tp 26 (71)
T PF08308_consen 11 SGAEVYVDGKYIGTTP 26 (71)
T ss_pred CCCEEEECCEEeccCc
Confidence 3456666776665544
No 72
>PRK03202 6-phosphofructokinase; Provisional
Probab=20.55 E-value=3.1e+02 Score=26.18 Aligned_cols=37 Identities=32% Similarity=0.381 Sum_probs=29.0
Q ss_pred EEEEEcCchhHHHHHHHhhhhccCCCCCCCcEEEeecCCCcchhh
Q 020123 2 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 46 (331)
Q Consensus 2 ~viv~GGDGTl~~vvn~l~~~~~~~~~~~~~lgiiP~GTgNdfAr 46 (331)
.++++|||||+..+. .|.+ ..+++--||-==-||+.-
T Consensus 96 ~Li~IGGd~s~~~a~-~L~e-------~~i~vigiPkTIDNDl~g 132 (320)
T PRK03202 96 ALVVIGGDGSYMGAK-RLTE-------HGIPVIGLPGTIDNDIAG 132 (320)
T ss_pred EEEEeCChHHHHHHH-HHHh-------cCCcEEEecccccCCCCC
Confidence 478999999998765 4543 467888899888999883
No 73
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional
Probab=20.48 E-value=81 Score=29.49 Aligned_cols=21 Identities=33% Similarity=0.542 Sum_probs=16.2
Q ss_pred EEEEEcCch-hHHHHHHHhhhh
Q 020123 2 RIVVAGGDG-TVGWVLGSVGEL 22 (331)
Q Consensus 2 ~viv~GGDG-Tl~~vvn~l~~~ 22 (331)
.||++.||| +++.-++.|...
T Consensus 79 ~VV~i~GDG~~f~ig~~eL~tA 100 (279)
T PRK11866 79 TVIGYGGDGDGYGIGLGHLPHA 100 (279)
T ss_pred cEEEEECChHHHHccHHHHHHH
Confidence 689999999 577777776543
Done!