Query 020128
Match_columns 330
No_of_seqs 110 out of 128
Neff 4.8
Searched_HMMs 46136
Date Fri Mar 29 07:14:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020128.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020128hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04765 DUF616: Protein of un 100.0 3E-106 5E-111 772.7 23.6 271 1-274 34-305 (305)
2 cd04194 GT8_A4GalT_like A4GalT 94.5 0.076 1.7E-06 48.8 5.7 109 112-251 85-199 (248)
3 cd00505 Glyco_transf_8 Members 90.8 1.2 2.5E-05 41.2 8.1 160 58-252 30-201 (246)
4 PF01501 Glyco_transf_8: Glyco 88.6 0.57 1.2E-05 41.7 4.1 112 110-249 86-203 (250)
5 PF03407 Nucleotid_trans: Nucl 76.4 6.8 0.00015 35.1 5.9 90 122-252 66-156 (212)
6 cd06429 GT8_like_1 GT8_like_1 65.6 8.6 0.00019 36.7 4.3 96 57-159 28-148 (257)
7 PLN02718 Probable galacturonos 62.5 16 0.00034 39.4 5.9 96 57-159 341-452 (603)
8 cd02537 GT8_Glycogenin Glycoge 48.8 67 0.0015 29.8 7.1 53 92-145 53-112 (240)
9 cd06432 GT8_HUGT1_C_like The C 46.6 22 0.00048 33.5 3.6 45 113-159 85-130 (248)
10 cd06431 GT8_LARGE_C LARGE cata 44.2 21 0.00045 34.5 3.1 98 57-159 29-135 (280)
11 PF03452 Anp1: Anp1; InterPro 43.5 23 0.0005 34.5 3.2 46 114-162 134-179 (269)
12 PLN02742 Probable galacturonos 39.6 52 0.0011 35.1 5.3 121 31-158 229-386 (534)
13 PF03314 DUF273: Protein of un 37.5 28 0.0006 33.2 2.6 59 116-180 35-93 (222)
14 KOG0400 40S ribosomal protein 35.1 36 0.00079 30.2 2.8 51 151-219 8-58 (151)
15 PLN00176 galactinol synthase 28.8 1E+02 0.0023 30.8 5.2 105 26-145 17-135 (333)
16 cd02515 Glyco_transf_6 Glycosy 20.7 84 0.0018 30.8 2.8 114 15-140 18-141 (271)
No 1
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=100.00 E-value=2.5e-106 Score=772.68 Aligned_cols=271 Identities=51% Similarity=0.953 Sum_probs=263.3
Q ss_pred CCCceeeeeeeeeCCCCCCChhcHHHHhcCCEEEEEeeecCCCCCCCCCCCCccccccEEEEEEeehhhHHHHhhccccc
Q 020128 1 MCSFIQVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIK 80 (330)
Q Consensus 1 ~~~~~~v~cgf~~~~g~~i~~~d~~~m~~ckiVVyTaIFG~YD~L~~P~~i~~~~~~~vCF~mF~D~~t~~~l~~~~~~~ 80 (330)
.+++|+|||||++++||||||.|+.+|++|+|||||||||+||+|+||+++++.++++|||+||||++|+++|++++.++
T Consensus 34 ~~~~~~v~Cgf~~~~gf~i~~~d~~~m~~c~vvV~saIFG~yD~l~qP~~i~~~s~~~vcf~mF~D~~t~~~l~~~~~~~ 113 (305)
T PF04765_consen 34 IQEDMTVHCGFVKNTGFDISESDRRYMEKCRVVVYSAIFGNYDKLRQPKNISEYSKKNVCFFMFVDEETLKSLESEGHIP 113 (305)
T ss_pred CCCCceeccccccCCCCCCCHHHHHHHhcCCEEEEEEecCCCccccCchhhCHHHhcCccEEEEEehhhHHHHHhcCCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999988875
Q ss_pred cCCCCCceeeceEEEEcCCCCCCCccccCCcceeeccCCCCCCCEEEEEecceeEeeCHHHHHHHHHhcCCCeEEEecCC
Q 020128 81 EDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHK 160 (330)
Q Consensus 81 ~d~~~~~~vg~WrIV~v~~~~y~d~rrn~r~pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp 160 (330)
++++++|+||||+|+++||+|+|||||+||+|||+|||||+|||||||||+|++||++||+++||+++++|||++||
T Consensus 114 ---~~~~~ig~WrIv~v~~lp~~d~rr~~r~~K~lpHrlfp~y~ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H~ 190 (305)
T PF04765_consen 114 ---DENKKIGIWRIVVVKNLPYDDPRRNGRIPKLLPHRLFPNYDYSIWIDGKIQLIVDPLLLIERFLWRKNADIAISKHP 190 (305)
T ss_pred ---ccccccCceEEEEecCCCCcchhhcCcccceeccccCCCCceEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeCCC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhccCChhHHHHHHHHHHHcCCCCcccCC-CCCCCCCcccEEecccCCchhhhHHHHHHHHhcCCCC
Q 020128 161 HHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKK-NTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPR 239 (330)
Q Consensus 161 ~R~cvyEEA~a~~~~~K~~~~~I~~Qm~~Y~~eGlp~~~~~k-~~~s~l~E~~vIiR~H~~~~nlf~clWfnEv~rfs~R 239 (330)
.|+||||||+||++++|++++.|++||++|+++|||+|++.+ |+.+|||||+||||+|++++|+|||+||||+++||+|
T Consensus 191 ~R~cvyeEa~a~~~~~k~~~~~I~~Qm~~Y~~eGlp~~s~~k~~l~s~v~E~~iIiR~H~~~~nlf~clWfnEv~rfs~R 270 (305)
T PF04765_consen 191 ERNCVYEEAEACKRLGKYDPERIDEQMEFYKQEGLPPWSPAKLPLPSDVPEGNIIIRKHNPMSNLFMCLWFNEVERFSPR 270 (305)
T ss_pred CcccHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCCcccccccccccCCccceEEEecCCchhHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999999999999999997666 8889999999999999999999999999999999999
Q ss_pred CcccHHHHHHHhcCcceeccccccccCceeeeecc
Q 020128 240 DQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPH 274 (330)
Q Consensus 240 DQLSF~Yv~~k~~~~~~~~mf~~~~~~~~f~~~~H 274 (330)
|||||+||+||++.+++++||++|+|++++++++|
T Consensus 271 DQLSF~Yv~wk~~~~~~~~mf~~~~~~~~~~~~~h 305 (305)
T PF04765_consen 271 DQLSFPYVLWKLGPKFKLNMFKDCERRQLVVLYRH 305 (305)
T ss_pred ccchHHHHHHHhCCcccchhhhHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999998
No 2
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=94.47 E-value=0.076 Score=48.83 Aligned_cols=109 Identities=17% Similarity=0.180 Sum_probs=68.9
Q ss_pred ceeeccCCCCCCCEEEEEecceeEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHHHH
Q 020128 112 PKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYR 191 (330)
Q Consensus 112 pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyEEA~a~~~~~K~~~~~I~~Qm~~Y~ 191 (330)
.|++...+||+++--||+|+-+.+.+|+..|.+.-+ ++..+|+..|.... + +.. . + .
T Consensus 85 ~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~--~~~~~aa~~d~~~~--~-~~~----~-~-------------~ 141 (248)
T cd04194 85 YRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDL--GDNLLAAVRDPFIE--Q-EKK----R-K-------------R 141 (248)
T ss_pred HHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCc--CCCEEEEEecccHH--H-HHH----H-H-------------h
Confidence 388999999999999999999999999999887434 46678887764311 1 000 0 0 1
Q ss_pred HcCCCCcccCCCCCCCCCcccEEecccC-----CchhhhHHHHHHHHh-cCCCCCcccHHHHHHHh
Q 020128 192 YEGMEPWSIKKNTVSDVPEGAVIIREHT-----ALSNLFSCLWFNEVN-LLTPRDQLSFGYVVYRL 251 (330)
Q Consensus 192 ~eGlp~~~~~k~~~s~l~E~~vIiR~H~-----~~~nlf~clWfnEv~-rfs~RDQLSF~Yv~~k~ 251 (330)
..+.++ ..+.+-+||++=+-. ...+.++ .|..+.. ++.-.||-.++.+.+..
T Consensus 142 ~~~~~~-------~~~yfNsGv~l~nl~~~r~~~~~~~~~-~~~~~~~~~~~~~DQd~LN~~~~~~ 199 (248)
T cd04194 142 RLGGYD-------DGSYFNSGVLLINLKKWREENITEKLL-ELIKEYGGRLIYPDQDILNAVLKDK 199 (248)
T ss_pred hcCCCc-------ccceeeecchheeHHHHHHhhhHHHHH-HHHHhCCCceeeCChHHHHHHHhCC
Confidence 222222 334577888874322 1222221 3333332 36679999999998874
No 3
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=90.82 E-value=1.2 Score=41.24 Aligned_cols=160 Identities=14% Similarity=0.146 Sum_probs=94.5
Q ss_pred cEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCCCCCC------CccccCCcceeeccCCCCCCCEEEEEec
Q 020128 58 LFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYD------EPRRNGKVPKILTHRLFPQAQYSIWIDG 131 (330)
Q Consensus 58 ~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIV~v~~~~y~------d~rrn~r~pKll~HrlFp~y~ySIWID~ 131 (330)
.+.|++++|+.+.+..+.=..+. .. .-..-+++.++...+. ......-+.|++..++||+++--||+|+
T Consensus 30 ~~~~~il~~~is~~~~~~L~~~~-~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~ 104 (246)
T cd00505 30 PLRFHVLTNPLSDTFKAALDNLR-KL----YNFNYELIPVDILDSVDSEHLKRPIKIVTLTKLHLPNLVPDYDKILYVDA 104 (246)
T ss_pred CeEEEEEEccccHHHHHHHHHHH-hc----cCceEEEEeccccCcchhhhhcCccccceeHHHHHHHHhhccCeEEEEcC
Confidence 57788888886664333211110 00 0123455555422211 2233344779999999999999999999
Q ss_pred ceeEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHHH-HHcCCCCcccCCCCCCCCCc
Q 020128 132 KMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIY-RYEGMEPWSIKKNTVSDVPE 210 (330)
Q Consensus 132 ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyEEA~a~~~~~K~~~~~I~~Qm~~Y-~~eGlp~~~~~k~~~s~l~E 210 (330)
-+.+..|+..|.+--+ ++..+|+..-..- .+ .. +.| +..|++. ....+-
T Consensus 105 D~iv~~di~~L~~~~l--~~~~~aav~d~~~--~~--------~~-----------~~~~~~~~~~~-------~~~yfN 154 (246)
T cd00505 105 DILVLTDIDELWDTPL--GGQELAAAPDPGD--RR--------EG-----------KYYRQKRSHLA-------GPDYFN 154 (246)
T ss_pred CeeeccCHHHHhhccC--CCCeEEEccCchh--hh--------cc-----------chhhcccCCCC-------CCCcee
Confidence 9999999999998655 5667887653210 00 00 111 1233332 223467
Q ss_pred ccEEecccCCc-----hhhhHHHHHHHHhcCCCCCcccHHHHHHHhc
Q 020128 211 GAVIIREHTAL-----SNLFSCLWFNEVNLLTPRDQLSFGYVVYRLK 252 (330)
Q Consensus 211 ~~vIiR~H~~~-----~nlf~clWfnEv~rfs~RDQLSF~Yv~~k~~ 252 (330)
+||++=+-... .......|.+...+..--||=.++.++...+
T Consensus 155 sGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~ 201 (246)
T cd00505 155 SGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVP 201 (246)
T ss_pred eeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCC
Confidence 88888444332 1222244555556788899999999988764
No 4
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=88.61 E-value=0.57 Score=41.71 Aligned_cols=112 Identities=13% Similarity=0.139 Sum_probs=63.4
Q ss_pred CcceeeccCCCCCCCEEEEEecceeEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHH
Q 020128 110 KVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKI 189 (330)
Q Consensus 110 r~pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyEEA~a~~~~~K~~~~~I~~Qm~~ 189 (330)
-+.|++.+.+||+|+--||+|+-+.+.+|+..|.+.-+ ++..+|+... .....
T Consensus 86 ~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~--~~~~~~a~~~-------------------------~~~~~ 138 (250)
T PF01501_consen 86 TFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDL--QGKYLAAVED-------------------------ESFDN 138 (250)
T ss_dssp GGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC-----TTSSEEEEE-----------------------------HH
T ss_pred HHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccc--hhhhcccccc-------------------------chhhh
Confidence 34689999999999999999999999999999988555 3566777666 11111
Q ss_pred HHHcCCCCcccCC-CCCCCCCcccEEecccCCch-hhhHHHHHHHHhc----CCCCCcccHHHHHH
Q 020128 190 YRYEGMEPWSIKK-NTVSDVPEGAVIIREHTALS-NLFSCLWFNEVNL----LTPRDQLSFGYVVY 249 (330)
Q Consensus 190 Y~~eGlp~~~~~k-~~~s~l~E~~vIiR~H~~~~-nlf~clWfnEv~r----fs~RDQLSF~Yv~~ 249 (330)
+- .+-...+... +...+.+-+||++=+-.... ..+...+-+.++. ..-.||=.|++++.
T Consensus 139 ~~-~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~ 203 (250)
T PF01501_consen 139 FP-NKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFY 203 (250)
T ss_dssp HH-TSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHT
T ss_pred hh-hcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhcc
Confidence 11 1111111111 23456788888884433222 1222222222222 34589999999987
No 5
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=76.44 E-value=6.8 Score=35.07 Aligned_cols=90 Identities=12% Similarity=0.134 Sum_probs=62.9
Q ss_pred CCCEEEEEecceeEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHHHHHcCCCCcccC
Q 020128 122 QAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIK 201 (330)
Q Consensus 122 ~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyEEA~a~~~~~K~~~~~I~~Qm~~Y~~eGlp~~~~~ 201 (330)
+++ -+++|+-+.+..||..+++ ..+.++.++.-..... +..
T Consensus 66 G~~-vl~~D~Dvv~~~dp~~~~~----~~~~Di~~~~d~~~~~-------------------------------~~~--- 106 (212)
T PF03407_consen 66 GYD-VLFSDADVVWLRDPLPYFE----NPDADILFSSDGWDGT-------------------------------NSD--- 106 (212)
T ss_pred CCc-eEEecCCEEEecCcHHhhc----cCCCceEEecCCCccc-------------------------------chh---
Confidence 444 5689999999999998882 1466676665211110 000
Q ss_pred CCCCCCCCcccEEecccCCchhhhHHHHHHHHhcCCC-CCcccHHHHHHHhc
Q 020128 202 KNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTP-RDQLSFGYVVYRLK 252 (330)
Q Consensus 202 k~~~s~l~E~~vIiR~H~~~~nlf~clWfnEv~rfs~-RDQLSF~Yv~~k~~ 252 (330)
.....+-++++.-+.++.+..|+..|-....+.+. .||-+|+.++....
T Consensus 107 --~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~~~~ 156 (212)
T PF03407_consen 107 --RNGNLVNTGFYYFRPTPRTIAFLEDWLERMAESPGCWDQQAFNELLREQA 156 (212)
T ss_pred --hcCCccccceEEEecCHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHhcc
Confidence 01122356778777789888888999999999955 79999999999953
No 6
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=65.55 E-value=8.6 Score=36.71 Aligned_cols=96 Identities=14% Similarity=0.207 Sum_probs=61.9
Q ss_pred ccEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCCCCCC-----Cc---------------cccCC-----c
Q 020128 57 KLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYD-----EP---------------RRNGK-----V 111 (330)
Q Consensus 57 ~~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIV~v~~~~y~-----d~---------------rrn~r-----~ 111 (330)
..++|.+|+|..+.+.++.-.... .. ..-..+++.+++..+. .+ .+... +
T Consensus 28 ~~~~fhvvtd~~s~~~~~~~~~~~--~~---~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~y 102 (257)
T cd06429 28 SNLVFHIVTDNQNYGAMRSWFDLN--PL---KIATVKVLNFDDFKLLGKVKVDSLMQLESEADTSNLKQRKPEYISLLNF 102 (257)
T ss_pred CceEEEEecCccCHHHHHHHHHhc--CC---CCceEEEEEeCcHHhhcccccchhhhhhccccccccccCCccccCHHHH
Confidence 467899999988877766532110 00 1134666666532111 01 11111 4
Q ss_pred ceeeccCCCCCCCEEEEEecceeEeeCHHHHHHHHHhcCCCeEEEecC
Q 020128 112 PKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQH 159 (330)
Q Consensus 112 pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~H 159 (330)
.+++.-.+||+.+--||+|+-+.+.+|..+|.+.=+ ++..+|+...
T Consensus 103 ~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl--~~~~~aav~d 148 (257)
T cd06429 103 ARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDL--GGGVAGAVET 148 (257)
T ss_pred HHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCC--CCCEEEEEhh
Confidence 466677889999999999999999999999988655 4666777655
No 7
>PLN02718 Probable galacturonosyltransferase
Probab=62.54 E-value=16 Score=39.41 Aligned_cols=96 Identities=10% Similarity=0.171 Sum_probs=60.7
Q ss_pred ccEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCCC---C--CCC-----ccccCC------cceeeccCCC
Q 020128 57 KLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHP---P--YDE-----PRRNGK------VPKILTHRLF 120 (330)
Q Consensus 57 ~~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIV~v~~~---~--y~d-----~rrn~r------~pKll~HrlF 120 (330)
..++|..|+|..+...++.=.... .. .-..+.|+.+++. | |.+ +..+.+ +.+++.-.+|
T Consensus 341 ~~ivFHVvTD~is~~~mk~wf~l~--~~---~~a~I~V~~Iddf~~lp~~~~~~lk~l~s~~~~~~S~~~y~Rl~ipell 415 (603)
T PLN02718 341 EKIVFHVVTDSLNYPAISMWFLLN--PP---GKATIQILNIDDMNVLPADYNSLLMKQNSHDPRYISALNHARFYLPDIF 415 (603)
T ss_pred CcEEEEEEeCCCCHHHHHHHHHhC--CC---CCcEEEEEecchhccccccchhhhhhccccccccccHHHHHHHHHHHHh
Confidence 368999999998887776321111 01 1245667776531 1 111 111111 2355566789
Q ss_pred CCCCEEEEEecceeEeeCHHHHHHHHHhcCCCeEEEecC
Q 020128 121 PQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQH 159 (330)
Q Consensus 121 p~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~H 159 (330)
|+.+--||+|+-+.+.+|...|.+--+ ++.-+|+...
T Consensus 416 p~l~KvLYLD~DvVV~~DL~eL~~iDl--~~~v~aaVed 452 (603)
T PLN02718 416 PGLNKIVLFDHDVVVQRDLSRLWSLDM--KGKVVGAVET 452 (603)
T ss_pred cccCEEEEEECCEEecCCHHHHhcCCC--CCcEEEEecc
Confidence 999999999999999999988887444 4556666643
No 8
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=48.81 E-value=67 Score=29.76 Aligned_cols=53 Identities=11% Similarity=0.182 Sum_probs=38.0
Q ss_pred eEEEEcCCCCCC-------CccccCCcceeeccCCCCCCCEEEEEecceeEeeCHHHHHHH
Q 020128 92 WRLILLKHPPYD-------EPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILER 145 (330)
Q Consensus 92 WrIV~v~~~~y~-------d~rrn~r~pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~ 145 (330)
++++.|+..... +.+-.+.+.|+..-.+ ++++--||+|+-+.+..|+..|.+.
T Consensus 53 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~kl~~~~l-~~~drvlylD~D~~v~~~i~~Lf~~ 112 (240)
T cd02537 53 WIVREVEPIDPPDSANLLKRPRFKDTYTKLRLWNL-TEYDKVVFLDADTLVLRNIDELFDL 112 (240)
T ss_pred CEEEecCccCCcchhhhccchHHHHHhHHHHhccc-cccceEEEEeCCeeEccCHHHHhCC
Confidence 567766643211 2333445778877775 5799999999999999998888763
No 9
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=46.62 E-value=22 Score=33.55 Aligned_cols=45 Identities=16% Similarity=0.273 Sum_probs=36.6
Q ss_pred eeeccCCCC-CCCEEEEEecceeEeeCHHHHHHHHHhcCCCeEEEecC
Q 020128 113 KILTHRLFP-QAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQH 159 (330)
Q Consensus 113 Kll~HrlFp-~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~H 159 (330)
.+++..+|| +++--||+|+-+-.++|..+|.+-=+ ++.-+|+..|
T Consensus 85 rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl--~~~~~Aav~d 130 (248)
T cd06432 85 ILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDL--KGAPYGYTPF 130 (248)
T ss_pred HHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCc--CCCeEEEeec
Confidence 366777898 69999999999999999988887545 4667888775
No 10
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=44.24 E-value=21 Score=34.45 Aligned_cols=98 Identities=10% Similarity=0.164 Sum_probs=60.4
Q ss_pred ccEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCC--CCCC---CccccCCc--ceeeccCCCC-CCCEEEE
Q 020128 57 KLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKH--PPYD---EPRRNGKV--PKILTHRLFP-QAQYSIW 128 (330)
Q Consensus 57 ~~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIV~v~~--~~y~---d~rrn~r~--pKll~HrlFp-~y~ySIW 128 (330)
..++|.+++|+.+.+.++.-...- + .....+....+++ ..+. .....+.+ .+++.+.+|| +++--||
T Consensus 29 ~~~~fhii~d~~s~~~~~~l~~~~-~----~~~~~i~f~~i~~~~~~~~~~~~~~~s~~y~y~RL~ip~llp~~~dkvLY 103 (280)
T cd06431 29 NPLHFHLITDEIARRILATLFQTW-M----VPAVEVSFYNAEELKSRVSWIPNKHYSGIYGLMKLVLTEALPSDLEKVIV 103 (280)
T ss_pred CCEEEEEEECCcCHHHHHHHHHhc-c----ccCcEEEEEEhHHhhhhhccCcccchhhHHHHHHHHHHHhchhhcCEEEE
Confidence 458999999987766544321110 0 0113455565541 1111 11222221 4888999999 6999999
Q ss_pred EecceeEeeCHHHHHHHH-HhcCCCeEEEecC
Q 020128 129 IDGKMELIVDPLLILERY-LWRGKHTFAIAQH 159 (330)
Q Consensus 129 ID~ki~L~~Dp~~lle~~-l~r~~~~~Ai~~H 159 (330)
+|+-+.+.+|+.+|.+-+ -..++.-+|+..+
T Consensus 104 LD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~ 135 (280)
T cd06431 104 LDTDITFATDIAELWKIFHKFTGQQVLGLVEN 135 (280)
T ss_pred EcCCEEEcCCHHHHHHHhhhcCCCcEEEEecc
Confidence 999999999999999864 1224445666654
No 11
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=43.45 E-value=23 Score=34.49 Aligned_cols=46 Identities=13% Similarity=0.353 Sum_probs=37.0
Q ss_pred eeccCCCCCCCEEEEEecceeEeeCHHHHHHHHHhcCCCeEEEecCCCC
Q 020128 114 ILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHH 162 (330)
Q Consensus 114 ll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R 162 (330)
+|.|-|=|..++.+|+|+-|. ..|-.||++++. .+.+|-+++=..|
T Consensus 134 LL~~aL~p~~swVlWlDaDIv--~~P~~lI~dli~-~~kdIivPn~~~~ 179 (269)
T PF03452_consen 134 LLSSALGPWHSWVLWLDADIV--ETPPTLIQDLIA-HDKDIIVPNCWRR 179 (269)
T ss_pred HHHhhcCCcccEEEEEecCcc--cCChHHHHHHHh-CCCCEEccceeec
Confidence 567777789999999999887 788899999985 6778887664443
No 12
>PLN02742 Probable galacturonosyltransferase
Probab=39.57 E-value=52 Score=35.13 Aligned_cols=121 Identities=14% Similarity=0.164 Sum_probs=70.1
Q ss_pred CEEEEEeeecCCCCCCCCCCCCccccccEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCCCCCCC----c-
Q 020128 31 KFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDE----P- 105 (330)
Q Consensus 31 kiVVyTaIFG~YD~L~~P~~i~~~~~~~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIV~v~~~~y~d----~- 105 (330)
+.||+|=-.++--....-.-.+...-..+-|-.+||..+...|+.=-.. .. ..--.|.|..+++....+ |
T Consensus 229 Hy~ifSdNvlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~-n~----~~~a~v~V~n~e~f~wl~~~~~pv 303 (534)
T PLN02742 229 HFCVFSDNILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAM-ND----FKGVTVEVQKIEEFSWLNASYVPV 303 (534)
T ss_pred eEEEEeccchhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhh-CC----CCccEEEEEEeccccccccccchH
Confidence 4777764444333333222222222245789999999998888763111 00 112557777766521110 0
Q ss_pred ---------------------cc--cCCccee---------eccCCCCCCCEEEEEecceeEeeCHHHHHHHHHhcCCCe
Q 020128 106 ---------------------RR--NGKVPKI---------LTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHT 153 (330)
Q Consensus 106 ---------------------rr--n~r~pKl---------l~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~ 153 (330)
.. ..|-||. +.-++||+.+--||+|+-+.+.+|...|.+-=+ ++.-
T Consensus 304 l~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL--~~~v 381 (534)
T PLN02742 304 LKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDL--HGNV 381 (534)
T ss_pred HHHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCC--CCCE
Confidence 00 1122332 233689999999999999999999998887544 3566
Q ss_pred EEEec
Q 020128 154 FAIAQ 158 (330)
Q Consensus 154 ~Ai~~ 158 (330)
+|+..
T Consensus 382 iaAVe 386 (534)
T PLN02742 382 NGAVE 386 (534)
T ss_pred EEEeC
Confidence 77663
No 13
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=37.47 E-value=28 Score=33.16 Aligned_cols=59 Identities=12% Similarity=0.251 Sum_probs=41.4
Q ss_pred ccCCCCCCCEEEEEecceeEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCCh
Q 020128 116 THRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYAR 180 (330)
Q Consensus 116 ~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyEEA~a~~~~~K~~~ 180 (330)
.+.++|++++-+++||-+-+ ++|...||.|+ .++.++-.+.-.. - -|+.|..-+-|-.+
T Consensus 35 va~~L~~~~~vlflDaDigV-vNp~~~iEefi-d~~~Di~fydR~~---n-~Ei~agsYlvkNT~ 93 (222)
T PF03314_consen 35 VAKILPEYDWVLFLDADIGV-VNPNRRIEEFI-DEGYDIIFYDRFF---N-WEIAAGSYLVKNTE 93 (222)
T ss_pred HHHHhccCCEEEEEcCCcee-ecCcccHHHhc-CCCCcEEEEeccc---c-hhhhhccceeeCCH
Confidence 35678999999999999977 78999999999 4677777764332 2 45555333333333
No 14
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=35.09 E-value=36 Score=30.22 Aligned_cols=51 Identities=16% Similarity=0.190 Sum_probs=37.6
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHHHHHcCCCCcccCCCCCCCCCcccEEecccC
Q 020128 151 KHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHT 219 (330)
Q Consensus 151 ~~~~Ai~~Hp~R~cvyEEA~a~~~~~K~~~~~I~~Qm~~Y~~eGlp~~~~~k~~~s~l~E~~vIiR~H~ 219 (330)
+-.++-+.-|+|..+ =.|-|-+.+.|++|+-.+-+-|++| +.-+||+|+-.
T Consensus 8 GKGis~SAlPY~r~~-------PtWlK~~~ddvkeqI~K~akKGltp-----------sqIGviLRDsh 58 (151)
T KOG0400|consen 8 GKGISGSALPYRRSV-------PTWLKLTADDVKEQIYKLAKKGLTP-----------SQIGVILRDSH 58 (151)
T ss_pred CcccccCccccccCC-------cHHHhcCHHHHHHHHHHHHHcCCCh-----------hHceeeeeccc
Confidence 334666777777653 1234667899999999999999997 46689998754
No 15
>PLN00176 galactinol synthase
Probab=28.81 E-value=1e+02 Score=30.83 Aligned_cols=105 Identities=10% Similarity=0.077 Sum_probs=61.6
Q ss_pred HHhcCCEEEEEeeecCCCCCCCCC-------CCCccccccEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcC
Q 020128 26 YVKKCKFVVASGIFDGYDVPHQPS-------NISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLK 98 (330)
Q Consensus 26 ~m~~ckiVVyTaIFG~YD~L~~P~-------~i~~~~~~~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIV~v~ 98 (330)
.++..+-|-+|.+.++.|-+..-. ..+ ...+.||++ ++|++.+..+. + ..-.|.|+.|+
T Consensus 17 ~~~~~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~-s~~~lVvlV--t~dVp~e~r~~---L--------~~~g~~V~~V~ 82 (333)
T PLN00176 17 LAKPAKRAYVTFLAGNGDYVKGVVGLAKGLRKVK-SAYPLVVAV--LPDVPEEHRRI---L--------VSQGCIVREIE 82 (333)
T ss_pred ccccCceEEEEEEecCcchHHHHHHHHHHHHHhC-CCCCEEEEE--CCCCCHHHHHH---H--------HHcCCEEEEec
Confidence 334457888888888877554322 122 223678876 67766543221 0 01225677665
Q ss_pred CC-CCCCc-cccC-----CcceeeccCCCCCCCEEEEEecceeEeeCHHHHHHH
Q 020128 99 HP-PYDEP-RRNG-----KVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILER 145 (330)
Q Consensus 99 ~~-~y~d~-rrn~-----r~pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~ 145 (330)
.. |-... .... -+.|++.-.| .+|+--||+|+-+.+.++...|++.
T Consensus 83 ~i~~~~~~~~~~~~~~~i~~tKl~iw~l-~~ydkvlyLDaD~lv~~nid~Lf~~ 135 (333)
T PLN00176 83 PVYPPENQTQFAMAYYVINYSKLRIWEF-VEYSKMIYLDGDIQVFENIDHLFDL 135 (333)
T ss_pred ccCCcccccccccchhhhhhhhhhhccc-cccceEEEecCCEEeecChHHHhcC
Confidence 32 11111 1000 1446666554 5899999999999999999988873
No 16
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=20.72 E-value=84 Score=30.83 Aligned_cols=114 Identities=13% Similarity=0.144 Sum_probs=63.3
Q ss_pred CCCCCChhcHHHHhcC-CEEEEEeeecCCCCCCCCCCCCccc-----cccEEEEEEeehhhHHHHhhcccccc-CCCCCc
Q 020128 15 GGAEMSPLDVKYVKKC-KFVVASGIFDGYDVPHQPSNISRRS-----KKLFCFLMVMDEVSLKFIRKNVTIKE-DSAGGQ 87 (330)
Q Consensus 15 ~g~~i~~~d~~~m~~c-kiVVyTaIFG~YD~L~~P~~i~~~~-----~~~vCF~mF~D~~t~~~l~~~~~~~~-d~~~~~ 87 (330)
+-||..--|..|.+++ +|.+.--.+|.|-..-+. .+.++. .-.|=|+.|||... .+|. ......
T Consensus 18 gtf~~~~l~~~y~~~n~tIgl~vfatGkY~~f~~~-F~~SAEk~Fm~g~~v~YyVFTD~~~--------~~p~v~lg~~r 88 (271)
T cd02515 18 GTFNPDVLDEYYRKQNITIGLTVFAVGKYTEFLER-FLESAEKHFMVGYRVIYYIFTDKPA--------AVPEVELGPGR 88 (271)
T ss_pred CcCCHHHHHHHHHhcCCEEEEEEEEeccHHHHHHH-HHHHHHHhccCCCeeEEEEEeCCcc--------cCcccccCCCc
Confidence 3366555666676666 566655558999864443 111111 13477999999432 2332 111111
Q ss_pred eeeceEEEEcC-CCCCCCc--cccCCcceeeccCCCCCCCEEEEEecceeEeeCHH
Q 020128 88 WVGIWRLILLK-HPPYDEP--RRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPL 140 (330)
Q Consensus 88 ~vg~WrIV~v~-~~~y~d~--rrn~r~pKll~HrlFp~y~ySIWID~ki~L~~Dp~ 140 (330)
. =+|+.|. .....+. +|..-+-+...-+++-++||-...|+++.+..+..
T Consensus 89 ~---~~V~~v~~~~~W~~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig 141 (271)
T cd02515 89 R---LTVLKIAEESRWQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFG 141 (271)
T ss_pred e---eEEEEeccccCCcHHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCC
Confidence 2 2344442 3444443 33322323333356889999999999999988644
Done!