Query 020129
Match_columns 330
No_of_seqs 149 out of 1342
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 12:13:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020129.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020129hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q4a_A Clavaminate synthase-li 100.0 1.3E-60 4.3E-65 446.9 28.5 322 4-330 5-330 (330)
2 1oih_A Putative alkylsulfatase 100.0 9.1E-41 3.1E-45 308.4 16.8 239 47-328 39-280 (301)
3 1otj_A Alpha-ketoglutarate-dep 100.0 1.1E-37 3.7E-42 285.3 13.6 236 47-328 29-271 (283)
4 3pvj_A Alpha-ketoglutarate-dep 100.0 2.9E-37 9.9E-42 281.3 14.2 235 47-327 27-268 (277)
5 1nx8_A CARC, carbapenem syntha 100.0 7.8E-37 2.7E-41 278.2 15.0 229 40-329 22-269 (273)
6 3r1j_A Alpha-ketoglutarate-dep 100.0 1.1E-36 3.7E-41 280.2 15.3 235 47-327 33-272 (301)
7 3eat_X Pyoverdine biosynthesis 100.0 2.1E-36 7.1E-41 277.9 17.1 229 47-328 42-277 (293)
8 3o2g_A Gamma-butyrobetaine dio 100.0 1.2E-34 3.9E-39 276.0 20.0 213 48-320 136-355 (388)
9 2og5_A Putative oxygenase; non 100.0 3.8E-30 1.3E-34 242.6 12.2 214 48-328 82-330 (357)
10 1ds1_A Clavaminate synthase 1; 100.0 1.3E-28 4.6E-33 229.2 13.2 212 53-328 53-298 (324)
11 2wbq_A L-arginine beta-hydroxy 100.0 2.1E-28 7.3E-33 230.9 10.6 227 51-328 69-335 (358)
12 1jr7_A GABT protein, hypotheti 99.9 3.1E-24 1.1E-28 194.7 11.7 205 49-324 65-293 (311)
13 3nnf_A CURA; non-HAEM Fe(II)/a 76.9 3.5 0.00012 36.9 5.4 31 287-318 227-257 (344)
14 2opw_A Phyhd1 protein; double- 69.3 3.1 0.0001 36.6 3.3 33 292-325 226-260 (291)
15 3emr_A ECTD; double stranded b 63.3 7.2 0.00025 34.9 4.6 32 293-325 229-262 (310)
16 2rdq_A 1-deoxypentalenic acid 60.2 5.2 0.00018 35.0 3.0 25 293-318 210-234 (288)
17 2a1x_A Phytanoyl-COA dioxygena 59.6 5.7 0.0002 35.2 3.2 33 292-325 214-248 (308)
18 2jig_A Prolyl-4 hydroxylase; h 57.6 5.9 0.0002 33.5 2.8 37 292-328 169-214 (224)
19 3itq_A Prolyl 4-hydroxylase, a 57.0 5.7 0.0002 33.7 2.6 36 293-328 165-209 (216)
20 2fct_A Syringomycin biosynthes 57.0 7.4 0.00025 34.5 3.5 27 292-319 218-244 (313)
21 1wdi_A Hypothetical protein TT 46.4 7.2 0.00025 35.4 1.6 20 297-316 51-70 (345)
22 1vky_A S-adenosylmethionine:tR 46.0 7.8 0.00027 35.2 1.7 20 297-316 61-80 (347)
23 1yy3_A S-adenosylmethionine:tR 43.6 7.3 0.00025 35.4 1.1 20 297-316 53-72 (346)
24 3gja_A CYTC3; halogenase, beta 36.7 21 0.00072 31.9 3.1 27 292-319 220-246 (319)
25 3rcq_A Aspartyl/asparaginyl be 29.1 31 0.0011 28.7 2.6 32 294-326 146-178 (197)
26 3gt2_A Putative uncharacterize 26.4 28 0.00096 27.1 1.8 12 297-308 89-100 (142)
27 2rdq_A 1-deoxypentalenic acid 25.7 73 0.0025 27.4 4.7 41 115-155 135-177 (288)
28 2rg4_A Uncharacterized protein 25.5 41 0.0014 28.2 2.8 33 294-327 169-202 (216)
29 3itq_A Prolyl 4-hydroxylase, a 24.7 26 0.00088 29.6 1.4 37 115-151 122-163 (216)
30 3pl0_A Uncharacterized protein 23.9 34 0.0012 29.7 2.0 22 297-318 203-224 (254)
31 2jov_A Hypothetical protein CP 23.6 68 0.0023 22.8 3.2 36 272-307 24-59 (85)
32 2opw_A Phyhd1 protein; double- 21.4 92 0.0031 26.8 4.4 31 51-84 6-36 (291)
33 2jig_A Prolyl-4 hydroxylase; h 20.6 42 0.0014 28.1 1.9 37 115-151 109-153 (224)
34 2k1g_A Lipoprotein SPR; soluti 20.2 35 0.0012 26.5 1.2 11 297-307 67-77 (135)
No 1
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=100.00 E-value=1.3e-60 Score=446.85 Aligned_cols=322 Identities=75% Similarity=1.321 Sum_probs=281.6
Q ss_pred cceeecCCCccccCCCCCCCCCceEEecCCCC----CCchHHHHHHHhhhHHHHHHHHHhcCeEEEeCCCCCCCHHHHHH
Q 020129 4 HFIEIKIPQQRNYNNINNSCPFPSVLSPNPAT----TATVSRLAEKVRTQKPFLDSLLLKAGSVLFRGFDDVKTAKEFND 79 (330)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~l~~~G~vl~rg~~~~~~~~~~~~ 79 (330)
.|++..+|+|++.+ +.+||++|+|.... ..+..+|.+++++.+++|+++|.+||+|+||||+ +.++++|.+
T Consensus 5 ~~~~~~~~~~~~~~----~~~~p~~i~p~~~~~~~~~~~g~dl~~~~~~~~~~l~~~l~~~GvvlfRg~~-~~~~~~~~~ 79 (330)
T 2q4a_A 5 LLVETPIPQQKHYE----SKPFPAVISPPSASIPIPALSLPLFTQTIKTQKHYLDSLLHESGAVLFRGFP-VNSADDFND 79 (330)
T ss_dssp CCEECCCSSCEEET----TEEESEEEECC------CCCCHHHHHHHHHHTHHHHHHHHHHHSEEEECSSC-CCSHHHHHH
T ss_pred EEeeeccCCCccCC----CCCCCEEEeCCCCCccccccccccHHHHHHHHHHHHHHHHHHCCEEEECCCC-CCCHHHHHH
Confidence 36788999999999 99999999997531 2457899999998899999999999999999999 669999999
Q ss_pred HHHHhCCCCCCCccCCCCceeecCccccCCCCCCCCCcccccCCCCCCCCCceEEecccccCCCCCccccccHHHHHHHh
Q 020129 80 VVEAFGYEELPYVGGAAPRTNIVGRVFTANESPPDQKIPFHHEMAQVPEFPSKLFFFCEVEPGSGGETPIVLSHIVYERM 159 (330)
Q Consensus 80 ~~~~fG~~~~~~~g~~~~r~~~~~~v~~~~~~p~~~~l~~H~D~sy~~~~P~~~~l~c~~~p~~GGeT~~~d~~~~~~~L 159 (330)
|+++||....+|.|+..+|..+.++|++++..+....+.||+|++|.+.||.+++|+|+++|..||+|+|||+++||+.|
T Consensus 80 ~~~~~G~~~~~~~g~~~~r~~v~~~v~~~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~~GG~T~~ad~~~ay~~L 159 (330)
T 2q4a_A 80 VVEAFGFDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQVREFPSKLFFYCEIEPKCGGETPIVLSHVVYERM 159 (330)
T ss_dssp HHHHTCCCBCCCCSCSSCCEEEETTEEECCCSCTTSCEEEECTTTTSTTCCSEEEEEEEECCSEECCCCEEEHHHHHHHH
T ss_pred HHHHhCCCcccccCCCCccccccCccccCCCCCCccccccccccCCCCCCCceEEEECcCCCCcCCceeeecHHHHHHHh
Confidence 99999998777877677788888888888888888999999999999999999999999999999999999999999999
Q ss_pred hhhCchHHHHHhhcCeEEEEEcCCCCCCCCCCCCCcccccccCChhHHHHHHHHhCCcEEEecCCceEEEEeeeceEEec
Q 020129 160 KHKYPDFVEQLEQHGLIYTRVLGEKDDPSSPIGRGWKSTFLTEDKSIAEERAARLGMKLEWMEDGGVKTIMGPIPAIKYD 239 (330)
Q Consensus 160 ~~~~pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~P~v~~h 239 (330)
+++.|++++.|.+.++.|.+++....++.++.+.+|+..|+++++++++++|++.|+.++|.+++........+|+|++|
T Consensus 160 ~~~~p~~~~~L~~~~~~~~~~~~~~~~~~s~~~~~w~~~f~~~~~~~~e~~~~~~g~~~~~~~~~~~~~~~~~~Pvv~~h 239 (330)
T 2q4a_A 160 KDKHPEFVQRLEEHGLLYVRVLGEDDDPSSPIGRGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYD 239 (330)
T ss_dssp HHHCHHHHHHHHHHCEEEEEEECSSBCTTSTTCCCHHHHTTCSSHHHHHHHHHHTTCCCEECTTSCEEEEEEEECSSEEE
T ss_pred hhhCHHHHHHHHhCCeEEEEEccccccccccCCccHHHHhcCCCHHHHHHHHHhcCCceEEcCCCceEEEEeccccEEec
Confidence 99999999999999999999886644444556789999999999999999999999999999887333245679999999
Q ss_pred CCCCceEEEecchhhccCCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHhhceeecccCCCCEEEEecccccccCCCCC
Q 020129 240 ESRQRKIWFNSMVAAYTGWKDDRNDPVKAVTFGNGKPLPADIVHDCLNILEEESVAIPWQKGDVLLIDNWAVLHARRSFN 319 (330)
Q Consensus 240 p~TG~~~~~n~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l~~l~~~~~~~~~~~~W~~GDvli~DN~~vlHgR~~f~ 319 (330)
|.||+++|||+....+..+...++..|..+.+++|++++.++++++.+++.+++|+|+|++||||||||+++||||++|+
T Consensus 240 p~tg~~~lf~~~~~~~~~~~~~~~~~p~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~w~~GDv~i~DN~~~lH~R~~f~ 319 (330)
T 2q4a_A 240 ESRNRKVWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEECVAVPWQRGDVLLIDNWAVLHSRRPFD 319 (330)
T ss_dssp TTTTEEECCSCHHHHHTTCCBTTBCHHHHEEETTSCCCCHHHHHHHHHHHHHHCBCCCCCTTCEEEEETTTEEEEECCEE
T ss_pred CCCCCeEEEechhhhccccccccccCccccccCCCCcCCHHHHHHHHHHHHhhEeecCCCCCCEEEEecccccccCCCCC
Confidence 99999999987654431222222334457789999999999999999989999999999999999999999999999999
Q ss_pred CCceeeeeccC
Q 020129 320 PPRRILASLCK 330 (330)
Q Consensus 320 g~R~il~~~~~ 330 (330)
|+||+|++||+
T Consensus 320 g~rR~l~r~~~ 330 (330)
T 2q4a_A 320 PPRRVLASLCK 330 (330)
T ss_dssp SCCEEEEEEBC
T ss_pred CCceEEEeecC
Confidence 99999999985
No 2
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=100.00 E-value=9.1e-41 Score=308.40 Aligned_cols=239 Identities=13% Similarity=0.150 Sum_probs=164.2
Q ss_pred hhhHHHHHHHHHhcCeEEEeCCCCCCCHHHHHHHHHHhCCCCCCCccCCCCceeecCccccCCCCCCCCCcccccCCCCC
Q 020129 47 RTQKPFLDSLLLKAGSVLFRGFDDVKTAKEFNDVVEAFGYEELPYVGGAAPRTNIVGRVFTANESPPDQKIPFHHEMAQV 126 (330)
Q Consensus 47 ~~~~~~l~~~l~~~G~vl~rg~~~~~~~~~~~~~~~~fG~~~~~~~g~~~~r~~~~~~v~~~~~~p~~~~l~~H~D~sy~ 126 (330)
++..++|+++|.+||+|+||||+.+ ++++|.+|+++||.+...+..+..+. .+.|+.+...++...+.||+|++|.
T Consensus 39 ~~~~~~l~~~l~~~Gvv~fRg~~~l-~~~~~~~~~~~fG~l~~~~~~~~~~~---~~~v~~v~~~~~~~~~~wHtD~sy~ 114 (301)
T 1oih_A 39 AATVEAIQAALVRHKVIFFRGQTHL-DDQSQEGFAKLLGEPVAHPTVPVVDG---TRYLLQLDGAQGQRANSWHTDVTFV 114 (301)
T ss_dssp HHHHHHHHHHHHHHSEEEECCCTTC-CHHHHHHHHHTTSCBCC----CCCTT---CSSCEEEC-----CCCSCBCTTTTS
T ss_pred HHHHHHHHHHHHHCCEEEECCCCCC-CHHHHHHHHHHhCCCccCcCCCCCCC---CCceEEEecCCCCcCcCCEecccCc
Confidence 4568899999999999999999734 78999999999998654332222211 1345544222225678999999999
Q ss_pred CCCCceEEecccccCCCCCccccccHHHHHHHhhhhCchHHHHHhhcCeEEEEEcCCCCCCCCCCCCCcccccccCChhH
Q 020129 127 PEFPSKLFFFCEVEPGSGGETPIVLSHIVYERMKHKYPDFVEQLEQHGLIYTRVLGEKDDPSSPIGRGWKSTFLTEDKSI 206 (330)
Q Consensus 127 ~~~P~~~~l~c~~~p~~GGeT~~~d~~~~~~~L~~~~pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~ 206 (330)
+.||.+++|+|+++|..||+|+|||+++||+.|+ +++++.|+.+.+.|...+.. +.+|+.. +++ +
T Consensus 115 ~~pP~~~~L~c~~~p~~GG~T~~ad~~~ay~~L~---~~~~~~~~~l~~~~~~~~~~--------~~~~~~~--~~~--~ 179 (301)
T 1oih_A 115 EAYPKASILRSVVAPASGGDTVWANTAAAYQELP---EPLRELADKLWAVHSNEYDY--------ASLKPDI--DPA--K 179 (301)
T ss_dssp SSCCSEEEEEEEECCSSCCCEEEEEHHHHHHTSC---HHHHHHHHHCEEEEECC--------------------------
T ss_pred CCCCceEEEEEeecCCCCCccccccHHHHHHhCC---HHHHHHHhcCEEEEcccccc--------ccccccc--ccc--h
Confidence 9999999999999999999999999999999999 78888888877777542211 1345432 111 2
Q ss_pred HHHHHHHhCCcEEEecCCceEEEEeeeceEEecCCCCceEEEecchhhccCCCCCCCCCCcccccCCCCCCCHHHHHHHH
Q 020129 207 AEERAARLGMKLEWMEDGGVKTIMGPIPAIKYDESRQRKIWFNSMVAAYTGWKDDRNDPVKAVTFGNGKPLPADIVHDCL 286 (330)
Q Consensus 207 ~~~~~~~~~~~~~w~~~~~~~~~~~~~P~v~~hp~TG~~~~~n~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l~~l~ 286 (330)
++++| +|..++ . ....+|+|++||.||+++||++....++. |-..+.+.++|+.|.
T Consensus 180 ~~~~~-------~~~~~~-~--~~~~hPvV~~hP~tG~~~l~~~~~~~~i~--------------gl~~~e~~~ll~~l~ 235 (301)
T 1oih_A 180 LERHR-------KVFTST-V--YETEHPVVRVHPISGERALQLGHFVKRIK--------------GYSLADSQHLFAVLQ 235 (301)
T ss_dssp -------------------C--CEEEEESEEECTTTCCEEECCSTTEEEET--------------TSCHHHHHHHHHHHH
T ss_pred hhhhh-------hhhhcc-C--CceECCCEEecCCCCcEEEEeccCccccc--------------CCCHHHHHHHHHHHH
Confidence 33332 244443 2 24568999999999999988763333331 122234577888998
Q ss_pred HHH--hhceeecccCCCCEEEEecccccccCCCCCC-Cceeeeec
Q 020129 287 NIL--EEESVAIPWQKGDVLLIDNWAVLHARRSFNP-PRRILASL 328 (330)
Q Consensus 287 ~~~--~~~~~~~~W~~GDvli~DN~~vlHgR~~f~g-~R~il~~~ 328 (330)
+++ .+++|+|+|++||||||||+++||||++|+| .+|+|.+.
T Consensus 236 ~~~~~~~~~~~~~w~~GDvvi~DNr~~lH~r~~f~~~~~R~l~R~ 280 (301)
T 1oih_A 236 GHVTRLENTVRWRWEAGDVAIWDNRATQHYAVDDYGTQPRIVRRV 280 (301)
T ss_dssp HHHTSGGGEEEECCCTTCEEEEETTSEEEEECCCCTTSCCEEEEE
T ss_pred HHHhCccceEEEEEcCCCEEEEEccceeecccCCCCCCceEEEEE
Confidence 888 5578999999999999999999999999976 36655543
No 3
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=100.00 E-value=1.1e-37 Score=285.34 Aligned_cols=236 Identities=15% Similarity=0.154 Sum_probs=163.9
Q ss_pred hhhHHHHHHHHHhcCeEEEeCCCCCCCHHHHHHHHHHhCCCCC-CCccCCCCceeecCccccCCCCC--CCCCcccccCC
Q 020129 47 RTQKPFLDSLLLKAGSVLFRGFDDVKTAKEFNDVVEAFGYEEL-PYVGGAAPRTNIVGRVFTANESP--PDQKIPFHHEM 123 (330)
Q Consensus 47 ~~~~~~l~~~l~~~G~vl~rg~~~~~~~~~~~~~~~~fG~~~~-~~~g~~~~r~~~~~~v~~~~~~p--~~~~l~~H~D~ 123 (330)
++..++|+++|.+||+|+||||+ + +++++.+|+++||.+.. +..+. .+.. +.++.....+ ......||+|+
T Consensus 29 ~~~~~~l~~~l~~~Gvv~frg~~-~-~~~~~~~~~~~~G~~~~~~~~~~-~~~~---~~i~~v~~~~~~~~~~~~wHtD~ 102 (283)
T 1otj_A 29 DNQFEQLYHAVLRHQVVFLRDQA-I-TPQQQRALAQRFGELHIHPVYPH-AEGV---DEIIVLDTHNDNPPDNDNWHTDV 102 (283)
T ss_dssp HHHHHHHHHHHHHHSEEEECSCC-C-CHHHHHHHHHTTSCBCCCSSSCE-ETTE---EEEEEEEEBTTBCCCCCSCBCTT
T ss_pred HHHHHHHHHHHHHCCEEEECCCC-C-CHHHHHHHHHHhCCCCcCCCCCC-CCCC---CeEEEEeCCCCCCCcCCCcEeec
Confidence 34678899999999999999999 6 99999999999998653 23331 1111 1121111111 12456899999
Q ss_pred CCCCCCCceEEecccccCCCCCccccccHHHHHHHhhhhCchHHHHHhhcCeEEEEEcCCCCCCCCCCCCCcccccccCC
Q 020129 124 AQVPEFPSKLFFFCEVEPGSGGETPIVLSHIVYERMKHKYPDFVEQLEQHGLIYTRVLGEKDDPSSPIGRGWKSTFLTED 203 (330)
Q Consensus 124 sy~~~~P~~~~l~c~~~p~~GGeT~~~d~~~~~~~L~~~~pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d 203 (330)
+|.+.||.+++|+|+++|..||+|.|||+++||+.|+ +++++.|+.+...|...+. ..|+..++.+
T Consensus 103 sy~~~pp~~~~L~c~~~p~~GG~T~~~d~~~ay~~L~---~~~~~~~~~l~~~~~~~~~----------~~~~~~~g~~- 168 (283)
T 1otj_A 103 TFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALS---VPFRQLLSGLRAEHDFRKS----------FPEYKYRKTE- 168 (283)
T ss_dssp TTSSSCEEEEEEEEEECCSSCCCEEEEEHHHHHHTSC---HHHHHHHTTCEEEECHHHH----------SCGGGSCSSH-
T ss_pred cCccCCCceEEEEEEecCCCCCcceeeeHHHHHHhCC---HHHHHHHhCcEEEEcchhh----------cchhhcccCc-
Confidence 9999999999999999999999999999999999999 7888888876666532111 1232323221
Q ss_pred hhHHHHHHHHhCCcEEEecCCceEEEEeeeceEEecCCCCceE-EEecchhhccCCCCCCCCCCcccccCCCCCCCHHHH
Q 020129 204 KSIAEERAARLGMKLEWMEDGGVKTIMGPIPAIKYDESRQRKI-WFNSMVAAYTGWKDDRNDPVKAVTFGNGKPLPADIV 282 (330)
Q Consensus 204 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~P~v~~hp~TG~~~-~~n~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l 282 (330)
...++..... +. .. ...+|+|++||.||+++ |+|+....++. |-..+.+.++|
T Consensus 169 -~~~~~~~~~~--------~~-~~--~~~~Pvv~~hp~tG~~~l~~n~~~~~~i~--------------g~~~~e~~~ll 222 (283)
T 1otj_A 169 -EEHQRWREAV--------AK-NP--PLLHPVVRTHPVSGKQALFVNEGFTTRIV--------------DVSEKESEALL 222 (283)
T ss_dssp -HHHHHHHHHH--------HH-CC--CEEEESEEECTTTCCEEECCCTTTEEEES--------------SSCHHHHHHHH
T ss_pred -cccccccccc--------cc-CC--CccCCeEEeCCCCCcEEEEecccccccCC--------------CCCHHHHHHHH
Confidence 1111111100 00 11 34579999999999998 56754433331 11222346788
Q ss_pred HHHHHHHhh--ceeecccCCCCEEEEecccccccCCCCC-CCceeeeec
Q 020129 283 HDCLNILEE--ESVAIPWQKGDVLLIDNWAVLHARRSFN-PPRRILASL 328 (330)
Q Consensus 283 ~~l~~~~~~--~~~~~~W~~GDvli~DN~~vlHgR~~f~-g~R~il~~~ 328 (330)
+.|.+++.+ ++|+|+|++||||||||+++||||++|. +.+|+|.+.
T Consensus 223 ~~l~~~~~~~~~~~~~~w~~GDv~i~DN~~~lH~r~~f~~~~~R~l~R~ 271 (283)
T 1otj_A 223 SFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRA 271 (283)
T ss_dssp HHHHHHTTCGGGEEEECCCTTCEEEEETTSEEEEECCCCTTSCEEEEEE
T ss_pred HHHHHHHhCCCcEEEeeEcCCCEEEEECcceeecccCCCCCCceEEEEE
Confidence 888888764 4799999999999999999999999995 446655543
No 4
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=100.00 E-value=2.9e-37 Score=281.34 Aligned_cols=235 Identities=15% Similarity=0.175 Sum_probs=160.9
Q ss_pred hhhHHHHHHHHHhcCeEEEeCCCCCCCHHHHHHHHHHhCCCCCCCccCCCCceeecCccccCCCC--CCCCCcccccCCC
Q 020129 47 RTQKPFLDSLLLKAGSVLFRGFDDVKTAKEFNDVVEAFGYEELPYVGGAAPRTNIVGRVFTANES--PPDQKIPFHHEMA 124 (330)
Q Consensus 47 ~~~~~~l~~~l~~~G~vl~rg~~~~~~~~~~~~~~~~fG~~~~~~~g~~~~r~~~~~~v~~~~~~--p~~~~l~~H~D~s 124 (330)
++..++|+++|.+||+|+||||+ + +++++.+|+++||.+...+..+..+. .+.++..... .....+.||+|++
T Consensus 27 ~~~~~~l~~~l~~~gvv~fR~q~-l-~~~~~~~fa~~fG~l~~~p~~~~~~~---~~~i~~i~~~~~~~~~~~~wH~D~s 101 (277)
T 3pvj_A 27 AEERDAIEQALLQHQVLFLRDQP-I-NPEQQARFAARFGDLHIHPIYPNVPD---TPQVLVLDTAVTDVRDNAVWHTDVT 101 (277)
T ss_dssp HHHHHHHHHHHHHHSEEEESSCC-C-CHHHHHHHHGGGSCEECCSSSCEETT---EEEEEEEETTTSCCGGGSSCBCTTT
T ss_pred HHHHHHHHHHHHHCCEEEECCCC-C-CHHHHHHHHHHhCCCcccCccCCCCC---CCeEEEEecCCCCCCcCCCceeeCC
Confidence 35678899999999999999999 6 89999999999998754222111111 1122221111 1235678999999
Q ss_pred CCCCCCceEEecccccCCCCCccccccHHHHHHHhhhhCchHHHHHhhcCeEEEEEcCCCCCCCCCCCCCccc-ccccCC
Q 020129 125 QVPEFPSKLFFFCEVEPGSGGETPIVLSHIVYERMKHKYPDFVEQLEQHGLIYTRVLGEKDDPSSPIGRGWKS-TFLTED 203 (330)
Q Consensus 125 y~~~~P~~~~l~c~~~p~~GGeT~~~d~~~~~~~L~~~~pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~-~f~~~d 203 (330)
|.+.||.+++|+|+++|..||+|.|+|++++|+.|+ +++++.|+.+. ..+.... ++.. .+. ..
T Consensus 102 y~~~pp~~~~l~~~~~p~~GG~T~~~d~~~ay~~L~---~~~~~~~~~l~--a~h~~~~----------~~~~~~~~-~~ 165 (277)
T 3pvj_A 102 FLPTPALGAVLSAKQLPAYGGDTLWASGIAAFEALS---APLREMLDGLT--ATHDFTK----------SFPLERFG-TT 165 (277)
T ss_dssp TSSSCCCEEEEEEEECCSSCCCEEEEEHHHHHHHSC---HHHHHHHTTCE--EEECGGG----------TSCGGGTC-SS
T ss_pred CcCCCCceEEEEeeccCCCCCCcEeeeHHHHHHhCC---HHHHHHHhccE--EEeCcHH----------Hhhhhhcc-CC
Confidence 999999999999999999999999999999999999 78999998544 3332211 1110 000 11
Q ss_pred hhHHHHHHHHhCCcEEEecCCceEEEEeeeceEEecCCCCceEEE-ecchhhccCCCCCCCCCCcccccCCCCCCCHHHH
Q 020129 204 KSIAEERAARLGMKLEWMEDGGVKTIMGPIPAIKYDESRQRKIWF-NSMVAAYTGWKDDRNDPVKAVTFGNGKPLPADIV 282 (330)
Q Consensus 204 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~P~v~~hp~TG~~~~~-n~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l 282 (330)
.++..+...... . .. ...||+|++||.||++++| |.....++ .|-..+.+.++|
T Consensus 166 ~~~~~~~~~~~~-------~--~~--~~~hPvVr~hP~TG~k~L~vn~~~~~~i--------------~gl~~~es~~ll 220 (277)
T 3pvj_A 166 PQDLARWEATRR-------N--NP--PLSHPVVRTHPVSGRKALFVNEGFTTRI--------------NELSELESDALL 220 (277)
T ss_dssp HHHHHHHHHHHH-------H--SC--CEEEESEEECTTTCCEEECCCTTTEEEE--------------TTSCHHHHHHHH
T ss_pred chhccchhhhhc-------c--CC--CCcCCeEEecCCCCCEEEEeccccceee--------------cCCCHHHHHHHH
Confidence 111111100000 0 11 2358999999999999854 64333333 122224467889
Q ss_pred HHHHHHHhh--ceeecccCCCCEEEEecccccccCCCCC-CCceeeee
Q 020129 283 HDCLNILEE--ESVAIPWQKGDVLLIDNWAVLHARRSFN-PPRRILAS 327 (330)
Q Consensus 283 ~~l~~~~~~--~~~~~~W~~GDvli~DN~~vlHgR~~f~-g~R~il~~ 327 (330)
+.|.+++.+ +.|+|+|++||||||||+++||+|+++. +.+|++.+
T Consensus 221 ~~L~~~~~~pe~~~r~~W~~GDlviwDNr~~lH~a~~d~~~~~R~~~R 268 (277)
T 3pvj_A 221 RLLFAHATRPEFSIRWRWQENDVAFWDNRVTQHFAVDDYRPNRRVMHR 268 (277)
T ss_dssp HHHHHHHTSGGGEEEECCCTTCEEEEETTSEEEEECCCCTTSCCEEEE
T ss_pred HHHHHHHhCCCcEEEEeeCCCCEEEEeCCceeeeccCCCCCCccEEEE
Confidence 999988876 4699999999999999999999998764 34555544
No 5
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=100.00 E-value=7.8e-37 Score=278.23 Aligned_cols=229 Identities=19% Similarity=0.249 Sum_probs=160.5
Q ss_pred HHHHHHHhhhHHHHHHHHHhcCeEEEeCCCCCCCHHHHHHHHHHhCCCCCCCccCCCCceeecCccccCC---CCC--CC
Q 020129 40 SRLAEKVRTQKPFLDSLLLKAGSVLFRGFDDVKTAKEFNDVVEAFGYEELPYVGGAAPRTNIVGRVFTAN---ESP--PD 114 (330)
Q Consensus 40 ~~~~~~~~~~~~~l~~~l~~~G~vl~rg~~~~~~~~~~~~~~~~fG~~~~~~~g~~~~r~~~~~~v~~~~---~~p--~~ 114 (330)
.++.++ + .++|+++|.+||+++|||++ + +++++.+|+++||.+...... ..++....+.++... +.+ +.
T Consensus 22 ~dl~~~-~--~~~l~~~l~~~G~v~~rg~~-~-~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~v~~v~~~~~~~~~~~ 95 (273)
T 1nx8_A 22 RDFLEA-K--TETIKNLLMRQGFVVVKNLD-I-DSDTFRDIYSAYGTIVEYADE-KIGVGFGYRDTLKLEGEKGKIVTGR 95 (273)
T ss_dssp HHHHHS-C--HHHHHHHHHHHCEEEECSCC-C-CHHHHHHHHHTTSEECCC------------CCSEEECCCTTCSTTSS
T ss_pred CCcccC-C--HHHHHHHHHHCCEEEECCCC-C-CHHHHHHHHHHhCCccccccc-cccCCCCCCceEEecCCCCCccccc
Confidence 466666 3 88999999999999999999 6 899999999999976431111 001111112222111 111 34
Q ss_pred CCcccccCCCCCCCCCceEEecccccCC--CCCccccccHHHHHHHhhhhCchHHHHHhhcCeEEEEEcCCCCCCCCCCC
Q 020129 115 QKIPFHHEMAQVPEFPSKLFFFCEVEPG--SGGETPIVLSHIVYERMKHKYPDFVEQLEQHGLIYTRVLGEKDDPSSPIG 192 (330)
Q Consensus 115 ~~l~~H~D~sy~~~~P~~~~l~c~~~p~--~GGeT~~~d~~~~~~~L~~~~pel~~~L~~~~v~~~~~~~~~~~~~~~~~ 192 (330)
..+.||+|++|.+.||++++|+|+++|. .||+|.|||+++||+.|+ +++++.|+.+.+.|... .
T Consensus 96 ~~~~~HtD~sy~~~pp~~~~L~c~~~p~~~~GG~T~~~d~~~a~~~L~---~~~~~~l~~l~~~~~~~--~--------- 161 (273)
T 1nx8_A 96 GQLPFHADGGLLLSQVDQVFLYAAEIKNVKFRGATTVCDHALACQEMP---AHLLRVLEEETFEVRVL--E--------- 161 (273)
T ss_dssp SCEEEECTTTTTTCCCCEEEEEEEEEESCSSSSCEEEEEHHHHHHHSC---HHHHHHHHHSCEEEEEC------------
T ss_pred cCCCCcCCCCCccCCCeeEEEEeEeCCCCCCCCcchhhhHHHHHHhCC---HHHHHHHhhcEEEEech--h---------
Confidence 6789999999999999999999999999 999999999999999999 67777777776655321 0
Q ss_pred CCcccccccCChhHHHHHHHHhCCcEEEecCCceEEEEeeeceEEecCCCCceEEEe-------cc-hhhccCCCCCCCC
Q 020129 193 RGWKSTFLTEDKSIAEERAARLGMKLEWMEDGGVKTIMGPIPAIKYDESRQRKIWFN-------SM-VAAYTGWKDDRND 264 (330)
Q Consensus 193 ~~w~~~f~~~d~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~P~v~~hp~TG~~~~~n-------~~-~~~~~~~~~~~~~ 264 (330)
.+|+..++. +. ...+|+ ++||.||++++|+ +. ....+
T Consensus 162 ~~~~~~~~~---------------------~~-----~~~~Pv-~~hp~tG~~~l~~~r~~~~~~~~~~~~i-------- 206 (273)
T 1nx8_A 162 RGYYVDVSP---------------------DG-----WFKVPV-FTDLGWVRKMLIYFPFDEGQPASWEPRI-------- 206 (273)
T ss_dssp -------------------------------------CEECCS-EEECSSCEEECCBCCCCTTSCCSEEEEE--------
T ss_pred cccccCCCc---------------------cc-----ccCCCC-ccCCCCCceeEEeeeeccccCccccccC--------
Confidence 122211110 00 235799 9999999999765 22 21111
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHH--hhceeecccCCCCEEEEecccccccCCCCCC--Cceeeeecc
Q 020129 265 PVKAVTFGNGKPLPADIVHDCLNIL--EEESVAIPWQKGDVLLIDNWAVLHARRSFNP--PRRILASLC 329 (330)
Q Consensus 265 ~~~~~~~gdg~~~~~~~l~~l~~~~--~~~~~~~~W~~GDvli~DN~~vlHgR~~f~g--~R~il~~~~ 329 (330)
.|-..+.+.++|+.|.+++ .+++++|+|++||+|||||+++||||++|++ .+|+|.+++
T Consensus 207 ------~~~~~~e~~~~l~~l~~~~~~~~~~~~~~w~~GD~~i~DN~~vlH~R~~f~~~~~~R~l~R~~ 269 (273)
T 1nx8_A 207 ------VGFTDHETQAFFQELGAFLKQPRYYYKHFWEDGDLLIMDNRRVIHEREEFNDDDIVRRLYRGQ 269 (273)
T ss_dssp ------TTCCHHHHHHHHHHHHHHHTSTTTEEEECCCTTCEEEEETTTEEEEECCCCCTTCEEEEEEEE
T ss_pred ------CCCCHHHHHHHHHHHHHHhcCCceEEEeEecCCCEEEEECCeeeeccccCCCCCCCeEEEEee
Confidence 1122234578899999998 5568999999999999999999999999975 577776543
No 6
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=100.00 E-value=1.1e-36 Score=280.22 Aligned_cols=235 Identities=11% Similarity=0.143 Sum_probs=154.8
Q ss_pred hhhHHHHHHHHHhcCeEEEeCC-CCCCCHHHHHHHHHHhCCCCC-CCccCCCCceeecCccccCCCCCCCCCcccccCCC
Q 020129 47 RTQKPFLDSLLLKAGSVLFRGF-DDVKTAKEFNDVVEAFGYEEL-PYVGGAAPRTNIVGRVFTANESPPDQKIPFHHEMA 124 (330)
Q Consensus 47 ~~~~~~l~~~l~~~G~vl~rg~-~~~~~~~~~~~~~~~fG~~~~-~~~g~~~~r~~~~~~v~~~~~~p~~~~l~~H~D~s 124 (330)
++..++|+++|.+||+|+|||| + + +++++.+|+++||.+.. ++.+.. .. ...+.++...... ...+.||+|++
T Consensus 33 d~~~~~l~~al~~~gvv~fR~q~~-l-~~~~~~~fa~~fG~l~~hp~~~~~-~~-~~~pei~~i~~~~-~~~~~wH~D~s 107 (301)
T 3r1j_A 33 DATVEQIRRALLTHKVIFFRHQHH-L-DDSRQLEFARLLGTPIGHPAASAL-AA-KHLPVITPIDSEY-GKATRWHTDVT 107 (301)
T ss_dssp HHHHHHHHHHHHHHSEEEECCCTT-C-CHHHHHHHHHHHSCBBC---------------------------CCSCBCTTT
T ss_pred HHHHHHHHHHHHHCCEEEECCCCC-C-CHHHHHHHHHhcCCccccccccCC-CC-CCCCcEEEEeCCC-CCCCCCccccC
Confidence 4567889999999999999999 7 5 89999999999998753 222211 11 1112333221111 25678999999
Q ss_pred CCCCCCceEEecccccCCCCCccccccHHHHHHHhhhhCchHHHHHhhcCeEEEEEcCCCCCCCCCCCCCcccccccCCh
Q 020129 125 QVPEFPSKLFFFCEVEPGSGGETPIVLSHIVYERMKHKYPDFVEQLEQHGLIYTRVLGEKDDPSSPIGRGWKSTFLTEDK 204 (330)
Q Consensus 125 y~~~~P~~~~l~c~~~p~~GGeT~~~d~~~~~~~L~~~~pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~ 204 (330)
|.+.||.+++|+|+++|..||+|.|||++++|+.|+ +++++.|+.+.+.|....... +... .....
T Consensus 108 ~~~~pp~~~~l~~~~~p~~GG~T~fad~~~ay~~L~---~~~~~~~~~l~a~h~~~~~~~----------~~~~-~~~~~ 173 (301)
T 3r1j_A 108 FAANYPAASILRAVTLPSYGGSTLWASTVAAYQQLP---EPLRHLTENLWALHTNRYDYV----------RNDP-MNDTQ 173 (301)
T ss_dssp TSSSCCSEEEEEEEECCSSCCCEEEEEHHHHHHTCC---HHHHHHHTTCEEEEECC------------------------
T ss_pred CccCCCceeEEEEeecCCCCCCCeeEcHHHHHHhCC---HHHHHHHhcCEEEEcchhhhh----------hhcc-ccccc
Confidence 999999999999999999999999999999999999 789999997766654211100 0000 00000
Q ss_pred hHHHHHHHHhCCcEEEecCCceEEEEeeeceEEecCCCCceEEEecchhhccCCCCCCCCCCcccccCCCCCCCHHHHHH
Q 020129 205 SIAEERAARLGMKLEWMEDGGVKTIMGPIPAIKYDESRQRKIWFNSMVAAYTGWKDDRNDPVKAVTFGNGKPLPADIVHD 284 (330)
Q Consensus 205 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~P~v~~hp~TG~~~~~n~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l~~ 284 (330)
++. .-++... . ....||+|++||.||++++|-.....++ .|-..+.+.++|+.
T Consensus 174 ---~~~------~~~~~~~--~--~~~~hPvVr~hP~TG~k~L~v~~~~~~i--------------~gl~~~Es~~lL~~ 226 (301)
T 3r1j_A 174 ---RAF------RQAFEKP--D--FRTEHPVVRVHPETGERALLAGDFVRGF--------------VGLDGHESSVLLEL 226 (301)
T ss_dssp ------------------C--C--CEEEEESEEECTTTCCEEECCSTTEEEE--------------TTSCHHHHHHHHHH
T ss_pred ---hhh------ccccccc--C--CccccceEEECCCCCCeEEEeccccccc--------------cCCCHHHHHHHHHH
Confidence 000 0000011 1 1346899999999999985532222222 22233445788999
Q ss_pred HHHHHhh--ceeecccCCCCEEEEecccccccCCCC-CCCceeeee
Q 020129 285 CLNILEE--ESVAIPWQKGDVLLIDNWAVLHARRSF-NPPRRILAS 327 (330)
Q Consensus 285 l~~~~~~--~~~~~~W~~GDvli~DN~~vlHgR~~f-~g~R~il~~ 327 (330)
|.+++.+ +.|+|+|++||||||||+++||+|... .+.+|++.+
T Consensus 227 L~~~~~~pe~~~r~~W~~GDlviwDNr~~lH~a~~d~~~~~R~~~R 272 (301)
T 3r1j_A 227 LQRRITMPENTVRWSWAPGDVAMWDNRATQHRAIDDYDDQPRLMHR 272 (301)
T ss_dssp HHHHHTCGGGEEEECCCTTCEEEEETTSEEEEECCCSTTCCCEEEE
T ss_pred HHHHhcCCCeEEEeeeCCCCEEEEEcCceeecccCCCCCCCeEEEE
Confidence 9988876 569999999999999999999999854 444565544
No 7
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.1e-36 Score=277.91 Aligned_cols=229 Identities=18% Similarity=0.266 Sum_probs=158.8
Q ss_pred hhhHHHHHHHHHhcCeEEEeCCCCCCCHHHHHHHHHHhCCCCCCCccCCCCceeecCccccCCCCCCCCCcccccCCCCC
Q 020129 47 RTQKPFLDSLLLKAGSVLFRGFDDVKTAKEFNDVVEAFGYEELPYVGGAAPRTNIVGRVFTANESPPDQKIPFHHEMAQV 126 (330)
Q Consensus 47 ~~~~~~l~~~l~~~G~vl~rg~~~~~~~~~~~~~~~~fG~~~~~~~g~~~~r~~~~~~v~~~~~~p~~~~l~~H~D~sy~ 126 (330)
++..++|+++|.+||+|+||||+.+.+++++.+|+++||.+.....|.. ..+..+-...+....+..++||+|++|.
T Consensus 42 ~~~~~~L~~~l~~~gvv~fRgq~~l~~~~~~~~~a~~fG~l~~~~~g~~---~~v~~~~~~~~~~yt~~~~~wHtD~sy~ 118 (293)
T 3eat_X 42 ELPAQWLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAV---LELVEQEGAEDHIFANNYVPLHWDGMYL 118 (293)
T ss_dssp GSCHHHHHHHHHHHSEEEECSCBCCSSHHHHHHHHHHHSCBCCBTTBSC---EEEEECTTCCCTTTSCSCEEEECTTTTS
T ss_pred HHHHHHHHHHHHHhCEEEECCCCCCCCHHHHHHHHHHhCCCccccccCe---EEEEeCCCcccccccCCCccceECCCCc
Confidence 4578999999999999999999723489999999999999764444421 1111110011112234568899999999
Q ss_pred CCCCceEEecccccCC--CCCccccccHHHHHHHhhhhCchHHHHHhhcCeEEEEEcCCCCCCCCCCCCCcccccccCCh
Q 020129 127 PEFPSKLFFFCEVEPG--SGGETPIVLSHIVYERMKHKYPDFVEQLEQHGLIYTRVLGEKDDPSSPIGRGWKSTFLTEDK 204 (330)
Q Consensus 127 ~~~P~~~~l~c~~~p~--~GGeT~~~d~~~~~~~L~~~~pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~ 204 (330)
+.||.+++|+|+++|. .||+|.|+|++++|+.|+ |++++.|++..+.|... .. .+......
T Consensus 119 ~~pp~~~~L~c~~~p~~~~GG~T~~~d~~~ay~~L~---~~~~~~l~~~~~~~~~~--~~---------~~~~~~~~--- 181 (293)
T 3eat_X 119 ETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLAD---SSELELWRRASGRYQRS--AA---------HYSSRSAA--- 181 (293)
T ss_dssp SEEEEEEEEEEEECCSCCSBCCEEEEEHHHHHHHCC---HHHHHHHHHCEEEEECC----------------CEEEE---
T ss_pred CCCCceEEEEeEeCCCCCCCCceEEeeHHHHHHhCC---HHHHHHHhhCceEEEec--cc---------cccCccCC---
Confidence 9999999999999997 899999999999999999 89999999988887621 10 00000000
Q ss_pred hHHHHHHHHhCCcEEEecCCceEEEEeeeceEEe-cCCCCceEEE-ecchhhccCCCCCCCCCCcccccCCCCCCCHHHH
Q 020129 205 SIAEERAARLGMKLEWMEDGGVKTIMGPIPAIKY-DESRQRKIWF-NSMVAAYTGWKDDRNDPVKAVTFGNGKPLPADIV 282 (330)
Q Consensus 205 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~P~v~~-hp~TG~~~~~-n~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l 282 (330)
. .+..+. ...||+|++ ||.||++++| |. ...++ .|-..+.+.++|
T Consensus 182 ------------p-~~~~~~-----~~~hp~Vr~~hP~tG~k~L~v~~-~~~~i--------------~g~~~~es~~ll 228 (293)
T 3eat_X 182 ------------P-IVERHP-----RREFPILRFCEPPVEGDASFINP-SEFHY--------------DGIAPEQRGELL 228 (293)
T ss_dssp ------------E-SEEECT-----TTCCEEECCCCCC-----------CCEEE--------------ESSCTTTHHHHH
T ss_pred ------------c-eEEECC-----CCCcceEEecCCCCcccceecCc-ccccc--------------CCCCHHHHHHHH
Confidence 0 000011 235799999 8999999854 54 33332 233344568899
Q ss_pred HHHHHHHhh--ceeecccCCCCEEEEecccccccCCCCCC-Cceeeeec
Q 020129 283 HDCLNILEE--ESVAIPWQKGDVLLIDNWAVLHARRSFNP-PRRILASL 328 (330)
Q Consensus 283 ~~l~~~~~~--~~~~~~W~~GDvli~DN~~vlHgR~~f~g-~R~il~~~ 328 (330)
+.|.+++.+ +.|+|+|++||||||||+++||+|++|.+ .+|+|.+.
T Consensus 229 ~~L~~~~~~p~~~~~~~w~~GDlviwDNr~vlH~r~~~~~~~~R~l~R~ 277 (293)
T 3eat_X 229 ASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRV 277 (293)
T ss_dssp HHHHHHHTSTTTEEEECCCTTCEEEEETTTEEEEECCBSSCCCEEEEEE
T ss_pred HHHHHHHhCcccEEEEEcCCCCEEEEeCCceEEcccCCCCCCceEEEEE
Confidence 999998876 56999999999999999999999999964 56666554
No 8
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=100.00 E-value=1.2e-34 Score=276.02 Aligned_cols=213 Identities=19% Similarity=0.303 Sum_probs=157.4
Q ss_pred hhHHHHHHHHHhcCeEEEeCCCCCCCHHHHHHHHHHhCCCCCCCccCCCCceeecCccccCCCCCCCCCcccccCCCCCC
Q 020129 48 TQKPFLDSLLLKAGSVLFRGFDDVKTAKEFNDVVEAFGYEELPYVGGAAPRTNIVGRVFTANESPPDQKIPFHHEMAQVP 127 (330)
Q Consensus 48 ~~~~~l~~~l~~~G~vl~rg~~~~~~~~~~~~~~~~fG~~~~~~~g~~~~r~~~~~~v~~~~~~p~~~~l~~H~D~sy~~ 127 (330)
+...++.++|.+||+++|||++ + +++++.+|+++||.+..++.|.. ..+.......+..+++..++||||++|.+
T Consensus 136 ~~~~~~~~~l~~~Gvv~frg~~-~-~~~~~~~~a~~~G~l~~~~~g~~---~~v~~~~~~~~~~yt~~~l~~HtD~sy~~ 210 (388)
T 3o2g_A 136 EHAYKWLSTLKKVGIVRLTGAS-D-KPGEVSKLGKRMGFLYLTFYGHT---WQVQDKIDANNVAYTTGKLSFHTDYPALH 210 (388)
T ss_dssp HHHHHHHHHHHHHSEEEEECCC-S-STTHHHHHHHHHSCCCCBTTBSS---EEESCCTTCSSGGGSSSCEEEECSCTTSS
T ss_pred HHHHHHHHHHHhcCEEEEeCCC-C-CHHHHHHHHHHhCCCccccCCCc---eEEeecCCcCcccCccCCcccccCCCccC
Confidence 4456777889999999999999 6 89999999999999865544422 12222211223334567789999999999
Q ss_pred CCCceEEecccccCCCCCccccccHHHHHHHhhhhCchHHHHHhhcCeEEEEEcCCCCCCCCCCCCCcccccccCChhHH
Q 020129 128 EFPSKLFFFCEVEPGSGGETPIVLSHIVYERMKHKYPDFVEQLEQHGLIYTRVLGEKDDPSSPIGRGWKSTFLTEDKSIA 207 (330)
Q Consensus 128 ~~P~~~~l~c~~~p~~GGeT~~~d~~~~~~~L~~~~pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~~ 207 (330)
.||++++|+|+++|..||+|+|+|++++|+.|+++.|++++.|.+..+.|......
T Consensus 211 ~pp~~~~L~c~~~~~~GG~T~~~d~~~a~~~L~~~~p~~~~~L~~~~~~~~~~~~~------------------------ 266 (388)
T 3o2g_A 211 HPPGVQLLHCIKQTVTGGDSEIVDGFNVCQKLKKNNPQAFQILSSTFVDFTDIGVD------------------------ 266 (388)
T ss_dssp SCCSEEEEEEEECCSSSCCEEEEEHHHHHHHHHHHCHHHHHHHTTCEEEEEEEEES------------------------
T ss_pred CCCcEEEEEEEecCCCCCcCeeecHHHHHHHhhhhCHHHHHHHhcCCcccEEecCC------------------------
Confidence 99999999999999999999999999999999999999999999876665432100
Q ss_pred HHHHHHhCCcEEEecCCceEEEEeeeceEEecCCCCceE--EEecchhhccCCCCCCCCCCcccccCCCCCCCH---HHH
Q 020129 208 EERAARLGMKLEWMEDGGVKTIMGPIPAIKYDESRQRKI--WFNSMVAAYTGWKDDRNDPVKAVTFGNGKPLPA---DIV 282 (330)
Q Consensus 208 ~~~~~~~~~~~~w~~~~~~~~~~~~~P~v~~hp~TG~~~--~~n~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~---~~l 282 (330)
+. .......+|+|++||. |+.. +||......+ .+-....+. ++|
T Consensus 267 ---------------~~-~~~~~~~~Pvv~~hp~-g~~~~l~~~~~~~~~i--------------~~l~~~~~~~~~~al 315 (388)
T 3o2g_A 267 ---------------YC-DFSVQSKHKIIELDDK-GQVVRINFNNATRDTI--------------FDVPVERVQPFYAAL 315 (388)
T ss_dssp ---------------SS-EEEEEEEEESEEECTT-SCEEEECCCTTTBCSC--------------CCSCHHHHHHHHHHH
T ss_pred ---------------CC-CcceeeccCEEEEcCC-CCEEEEEeCccccccc--------------CCCCHHHHHHHHHHH
Confidence 00 1223456899999994 6543 3443211101 110101112 678
Q ss_pred HHHHHHHhh--ceeecccCCCCEEEEecccccccCCCCCC
Q 020129 283 HDCLNILEE--ESVAIPWQKGDVLLIDNWAVLHARRSFNP 320 (330)
Q Consensus 283 ~~l~~~~~~--~~~~~~W~~GDvli~DN~~vlHgR~~f~g 320 (330)
+.|.+++.+ +.++|+|+|||||||||+++||||++|++
T Consensus 316 ~~l~~~~~~p~~~~~~~~~pGd~vi~DNr~~lH~R~~f~~ 355 (388)
T 3o2g_A 316 KEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEA 355 (388)
T ss_dssp HHHHHHHHSTTTCEEECCCTTCEEEEETTTEEEEECCCCC
T ss_pred HHHHHHhcChhhEEEEEcCCCcEEEEeCcEEeeCCCCcCC
Confidence 899998884 56999999999999999999999999984
No 9
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=99.96 E-value=3.8e-30 Score=242.59 Aligned_cols=214 Identities=15% Similarity=0.222 Sum_probs=146.8
Q ss_pred hhHHHHHHHHH---hcCeEEEeCCCCCCCHHH---------------------HHHHHHHhCCCCCCCc----cCCCCce
Q 020129 48 TQKPFLDSLLL---KAGSVLFRGFDDVKTAKE---------------------FNDVVEAFGYEELPYV----GGAAPRT 99 (330)
Q Consensus 48 ~~~~~l~~~l~---~~G~vl~rg~~~~~~~~~---------------------~~~~~~~fG~~~~~~~----g~~~~r~ 99 (330)
+..++|++++. ++|+++|||++ + +.++ +..|++.||... .+. ++. ..
T Consensus 82 ~l~~~L~~~~~~~~~~Gvl~~rg~p-~-~~~~~~~tp~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~~~~~--~~ 156 (357)
T 2og5_A 82 TLRRDLAGFRRDSGPDGAIVLRGLP-V-DSMGLPPTPRVNGSVQREASLGAAVLLMTACGLGDPG-AFLPEKNGAL--VQ 156 (357)
T ss_dssp HHHHHHHHHHHCCTTTTEEEEECCC-C-CTTTCCSCCCSTTCBCCSCCHHHHHHHHHHHHHSEEE-EETTSGGGCS--SE
T ss_pred HHHHHHHHHHhcCCCCcEEEEcCCC-C-chhhcCCCCCCccccccccchHHHHHHHHHHhhCCcc-cccccCCCce--EE
Confidence 34577888777 59999999999 6 4433 456888888642 221 111 11
Q ss_pred eecC--ccccCCCCCCCCCcccccCCCCCCCCCceEEecccccCCCCCccccccHH-HHHHHhhhhCchHHHHHhhcCeE
Q 020129 100 NIVG--RVFTANESPPDQKIPFHHEMAQVPEFPSKLFFFCEVEPGSGGETPIVLSH-IVYERMKHKYPDFVEQLEQHGLI 176 (330)
Q Consensus 100 ~~~~--~v~~~~~~p~~~~l~~H~D~sy~~~~P~~~~l~c~~~p~~GGeT~~~d~~-~~~~~L~~~~pel~~~L~~~~v~ 176 (330)
.+.. +....+.......+.||||++|.+.||++++|+|+++|..||+|+|+|+. ++|+.|+ |++++.|++..
T Consensus 157 ~V~~~~~~~~~~~~~~~~~l~~HtD~sy~~~pP~~~~L~cl~~~~~GG~t~~~~~~~~al~~l~---p~~~~~L~~~~-- 231 (357)
T 2og5_A 157 DVVPVPGMEEFQGNAGSTLLTFHNENAFHEHRPDFVMLLCLRADPTGRAGLRTACVRRVLPLLS---DSTVDALWAPE-- 231 (357)
T ss_dssp EECCCTTCTTCSSTTCCSCEEEECTTTTCTTCCSEEEEEEEECCTTSCCCEEEEEHHHHGGGSC---HHHHHHHTSSC--
T ss_pred EEeeCCCcccccccccCccccccccCCCCCCCCCeEEEEEEccCCCCCccEEEeeHHHHHHhCC---HHHHHHHcCCC--
Confidence 1211 10011112223788999999999999999999999999999999999875 6777777 99999999654
Q ss_pred EEEEcCCCCCCCCCCCCCcccccccCChhHHHHHHHHhCCcEEEecCCceEEEEeeeceEEecCCCCceEEEecchhhcc
Q 020129 177 YTRVLGEKDDPSSPIGRGWKSTFLTEDKSIAEERAARLGMKLEWMEDGGVKTIMGPIPAIKYDESRQRKIWFNSMVAAYT 256 (330)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~P~v~~hp~TG~~~~~n~~~~~~~ 256 (330)
|.... . .+|. ... .. ...+|+|+.||. |+.++||.....
T Consensus 232 ~~~~~-~---------~~~~----~~~------------------~~------~~~~pvv~~~~~-g~~l~~~~~~~~-- 270 (357)
T 2og5_A 232 FRTAP-P---------PSFQ----LSG------------------PE------EAPAPVLLGDRS-DPDLRVDLAATE-- 270 (357)
T ss_dssp EECCC-C---------GGGC----------------------------------CCBCSEEECSS-SEEECCBTTTCE--
T ss_pred eEecC-C---------cccc----ccc------------------CC------CCcceEEEeCCC-CCeEEEchhhcC--
Confidence 33111 0 1121 000 00 234799999987 755677643210
Q ss_pred CCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHhhceeecccCCCCEEEEecccccccCCCCC----CCceeeeec
Q 020129 257 GWKDDRNDPVKAVTFGNGKPLPADIVHDCLNILEEESVAIPWQKGDVLLIDNWAVLHARRSFN----PPRRILASL 328 (330)
Q Consensus 257 ~~~~~~~~~~~~~~~gdg~~~~~~~l~~l~~~~~~~~~~~~W~~GDvli~DN~~vlHgR~~f~----g~R~il~~~ 328 (330)
..++++.++|+.|.+++.+.+++|+|++||||||||+++||||++|+ +.+|+|.++
T Consensus 271 ----------------~~~~e~~~aL~~l~~~~~~~~~~~~w~pGDivi~DN~~vlH~R~~f~d~~~~~~R~L~R~ 330 (357)
T 2og5_A 271 ----------------PVTERAAEALRELQAHFDATAVTHRLLPGELAIVDNRVTVHGRTEFTPRYDGTDRWLQRT 330 (357)
T ss_dssp ----------------ESSHHHHHHHHHHHHHHHHHCEEECCCTTCEEEEETTTEEEEECCCCCCCSSCSCEEEEE
T ss_pred ----------------CCCHHHHHHHHHHHHHHhhceEEEeeCCCCEEEEeCCccccCCCCCCCCCCCCCcEEEEE
Confidence 12345688999999999999999999999999999999999999996 345555443
No 10
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=99.95 E-value=1.3e-28 Score=229.18 Aligned_cols=212 Identities=17% Similarity=0.231 Sum_probs=139.8
Q ss_pred HHHHHHhcCeEEEeCCCCCCCH----------------------HHHHHHHHHhCCCCCCC----ccCCCCceeecCccc
Q 020129 53 LDSLLLKAGSVLFRGFDDVKTA----------------------KEFNDVVEAFGYEELPY----VGGAAPRTNIVGRVF 106 (330)
Q Consensus 53 l~~~l~~~G~vl~rg~~~~~~~----------------------~~~~~~~~~fG~~~~~~----~g~~~~r~~~~~~v~ 106 (330)
|++.+.++|+++|||++ +.+. ..+..+++.+|... .| .++. -..+.....
T Consensus 53 i~~~~~~~G~~llrG~p-~~~~~~~~~Tp~~~~~~~~~~~~~~~~~~~~~~~~lg~~~-g~~~~~~~~~--~~~V~~~~~ 128 (324)
T 1ds1_A 53 FNAEGSEDGHLLLRGLP-VEADADLPTTPSSTPAPEDRSLLTMEAMLGLVGRRLGLHT-GYRELRSGTV--YHDVYPSPG 128 (324)
T ss_dssp HHHHCCTTSEEEEESCC-CCCGGGSCCCCCSSSCCTTCCCCHHHHHHHHHHHHHCEEE-EETTSGGGCS--SEEECCCTT
T ss_pred HhccCCCCCEEEEcCCC-CCccccCCCCCCCccccccccccHHHHHHHHHHHhcCCcc-cccccCCCcE--EEEEEECCC
Confidence 33444499999999999 6421 23445677777532 11 1111 111111100
Q ss_pred --cCCCCCCCCCcccccCCCCCCCCCceEEecccccCCC-CCccccccHHHHHHHhhhhCchHHHHHhhcCeEEEEEcCC
Q 020129 107 --TANESPPDQKIPFHHEMAQVPEFPSKLFFFCEVEPGS-GGETPIVLSHIVYERMKHKYPDFVEQLEQHGLIYTRVLGE 183 (330)
Q Consensus 107 --~~~~~p~~~~l~~H~D~sy~~~~P~~~~l~c~~~p~~-GGeT~~~d~~~~~~~L~~~~pel~~~L~~~~v~~~~~~~~ 183 (330)
..+..++...++||||++|.+.||++++|+|+++|.. ||+|+|+|++.+|+.|+ |++++.|.+.- +....+
T Consensus 129 ~~~~~~~~t~~~l~~HtD~sy~~~pP~~~~L~c~~~~~~GGg~T~~~~~~~a~~~L~---~~~~~~l~~~~--~~~~~~- 202 (324)
T 1ds1_A 129 AHHLSSETSETLLEFHTEMAYHRLQPNYVMLACSRADHERTAATLVASVRKALPLLD---ERTRARLLDRR--MPCCVD- 202 (324)
T ss_dssp CCTTSTTCCSSCEEEECTTTTBTTCCSEEEEEEEECCTTCCCCEEEEEHHHHGGGSC---HHHHHHHBTCC--EEECCC-
T ss_pred CcccccccccCcccccccCCCCCCCCCeEEEEEeecCccCCceEEEeeHHHHHHhCC---HHHHHHHhccC--ccccCC-
Confidence 0122456788999999999999999999999999987 89999999999999999 78888887533 322111
Q ss_pred CCCCCCCCCCCcccccccCChhHHHHHHHHhCCcEEEecCCceEEEEeeeceEEecCCCCceE-EEecchhhccCCCCCC
Q 020129 184 KDDPSSPIGRGWKSTFLTEDKSIAEERAARLGMKLEWMEDGGVKTIMGPIPAIKYDESRQRKI-WFNSMVAAYTGWKDDR 262 (330)
Q Consensus 184 ~~~~~~~~~~~w~~~f~~~d~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~P~v~~hp~TG~~~-~~n~~~~~~~~~~~~~ 262 (330)
..|... .......||+|..+...+.+. +||....
T Consensus 203 -------------~~~~~~-----------------------~~~~~~~hPvv~~~g~~~~~~~~~~~~~~--------- 237 (324)
T 1ds1_A 203 -------------VAFRGG-----------------------VDDPGAIAQVKPLYGDADDPFLGYDRELL--------- 237 (324)
T ss_dssp -------------GGGCCC-----------------------CCSGGGSEEECSEESCTTSCEECCBTTTB---------
T ss_pred -------------hhhccC-----------------------CcCccccCCeEEEeCCCCCceEEECCccC---------
Confidence 111100 000123467765555544433 3342110
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHhhceeecccCCCCEEEEecccccccCCCCCC----Cceeeeec
Q 020129 263 NDPVKAVTFGNGKPLPADIVHDCLNILEEESVAIPWQKGDVLLIDNWAVLHARRSFNP----PRRILASL 328 (330)
Q Consensus 263 ~~~~~~~~~gdg~~~~~~~l~~l~~~~~~~~~~~~W~~GDvli~DN~~vlHgR~~f~g----~R~il~~~ 328 (330)
...++++.++|+.|.+++.++++.|+|++||||||||+++||||++|++ .+|+|.++
T Consensus 238 ---------~~~~~~~~~al~~l~~~~~~~~~~~~w~~GDv~i~DN~~~lH~R~~f~~~~~~~~R~L~R~ 298 (324)
T 1ds1_A 238 ---------APEDPADKEAVAALSKALDEVTEAVYLEPGDLLIVDNFRTTHARTPFSPRWDGKDRWLHRV 298 (324)
T ss_dssp ---------CCCSHHHHHHHHHHHHHHHHTCEEECCCTTCEEEEETTTEEEEECCCCCCCSSCCCEEEEE
T ss_pred ---------CCCCHHHHHHHHHHHHHHHhccEEEeeCCCCEEEEeCCceeecCCccCCCCCCCCcEEEEE
Confidence 0123566899999999999999999999999999999999999999976 25555443
No 11
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=99.95 E-value=2.1e-28 Score=230.85 Aligned_cols=227 Identities=16% Similarity=0.173 Sum_probs=143.9
Q ss_pred HHHHHHHHhc------CeEEEeCCCCCCCHHH----------------------HHHHHHHhCCCCCCCccCCCCceeec
Q 020129 51 PFLDSLLLKA------GSVLFRGFDDVKTAKE----------------------FNDVVEAFGYEELPYVGGAAPRTNIV 102 (330)
Q Consensus 51 ~~l~~~l~~~------G~vl~rg~~~~~~~~~----------------------~~~~~~~fG~~~~~~~g~~~~r~~~~ 102 (330)
..|++.|.++ |++||||++ + +.++ +..++..+|... .|.... ...+.
T Consensus 69 ~~l~~~L~~~~~~~~~G~ll~RGl~-v-~~~~~~~tp~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~~~~~~--~g~~~ 143 (358)
T 2wbq_A 69 KRLRTFMARARLDAWPHALVVRGNP-V-DDAALGSTPVHWRTARTPGSRPLSFLLMLYAGLLGDVF-GWATQQ--DGRVV 143 (358)
T ss_dssp HHHHHHHHHHTTCSSCSEEEEECCC-C-CHHHHCSCCSSSTTCCCGGGHHHHHHHHHHHHTTCEEE-EETTSG--GGCSS
T ss_pred HHHHHHHHHhhcCCCCCEEEEeCCC-c-chhhcCCCCCCCccccccccchHHHHHHHHHHhcCCce-EEeecC--CCCEE
Confidence 4688888888 999999999 6 4432 334555566542 221100 11111
Q ss_pred Ccccc-------CCCCCCCCCcccccCCCCCCCCCceEEecccccCCCCCccccccHHHHHHHhhhhCchHHHHHhhcCe
Q 020129 103 GRVFT-------ANESPPDQKIPFHHEMAQVPEFPSKLFFFCEVEPGSGGETPIVLSHIVYERMKHKYPDFVEQLEQHGL 175 (330)
Q Consensus 103 ~~v~~-------~~~~p~~~~l~~H~D~sy~~~~P~~~~l~c~~~p~~GGeT~~~d~~~~~~~L~~~~pel~~~L~~~~v 175 (330)
.+|+. .+.+++...+.||||++|.+.||++++|+|+++|. ||+|.|||+..+ .|+ |++++.|++..
T Consensus 144 ~~V~~~~~~~~~~~~~~t~~~l~~HtD~sy~~~pp~~~~L~cl~~p~-gG~T~~ad~~~~--~l~---p~~~~~L~~~~- 216 (358)
T 2wbq_A 144 TDVLPIKGGEHTLVSSSSRQELGWHTEDAFSPYRADYVGLLSLRNPD-GVATTLAGVPLD--DLD---ERTLDVLFQER- 216 (358)
T ss_dssp EEECCCTTCTTSSSTTCCSSCEEEECTTTTCTTCCSEEEEEEEECTT-CCEEEEEECCTT--TCC---HHHHHHHTSSC-
T ss_pred EeeeeCCCCccccccCCCCCCccccccCCCCCCCCCeEEEEeEecCC-CCCceEEechhh--hCC---HHHHHHHhCCC-
Confidence 22221 12233456789999999999999999999999999 999999998764 666 99999999654
Q ss_pred EEEEEcCCCCCCCCCCCCCcccccccCChhHHHHHHHHhCCcEEEecCCceEEEEeeeceEEecCCCCceE-EEecchhh
Q 020129 176 IYTRVLGEKDDPSSPIGRGWKSTFLTEDKSIAEERAARLGMKLEWMEDGGVKTIMGPIPAIKYDESRQRKI-WFNSMVAA 254 (330)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~P~v~~hp~TG~~~-~~n~~~~~ 254 (330)
|....... ...|...++..+..+.+... +|..++ ..+|+++.|+ |++. +||....
T Consensus 217 -~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------~~~~~~------~~hpvv~~~~--~~~~l~~~~~~~- 272 (358)
T 2wbq_A 217 -FLIRPDDS-------HLQVNNSTAQQGRVEFEGIA-------QAADRP------EPVAILTGHR--AAPHLRVDGDFS- 272 (358)
T ss_dssp -EECCCCGG-------GSGGGCC-----CTHHHHHH-------HHHHSC------CCBCSEEEET--TEEEECCBTTTC-
T ss_pred -eEEcCCcc-------cccccccccccchhhhhhhh-------hhccCC------CcceeeeCCC--CCCcEEECcccc-
Confidence 43211110 01111111222111111110 122222 2478898887 6665 3443211
Q ss_pred ccCCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHhhceeecccCCCCEEEEecccccccCCCCC----CCceeeeec
Q 020129 255 YTGWKDDRNDPVKAVTFGNGKPLPADIVHDCLNILEEESVAIPWQKGDVLLIDNWAVLHARRSFN----PPRRILASL 328 (330)
Q Consensus 255 ~~~~~~~~~~~~~~~~~gdg~~~~~~~l~~l~~~~~~~~~~~~W~~GDvli~DN~~vlHgR~~f~----g~R~il~~~ 328 (330)
...+.++++.++|+.|.+++.+++++|+|++||||||||+++||||++|+ +.+|+|.++
T Consensus 273 ---------------~~~~~~~e~~~aL~~l~~~~~~~~~~~~w~pGDv~i~DNr~vlH~R~~f~~~~~~~~R~L~R~ 335 (358)
T 2wbq_A 273 ---------------APAEGDEEAAAALGTLRKLIDASLYELVLDQGDVAFIDNRRAVHGRRAFQPRYDGRDRWLKRI 335 (358)
T ss_dssp ---------------EESTTCHHHHHHHHHHHHHHHHHCEEEECCTTCEEEEETTTEEEEECCCCCCCSSCCCEEEEE
T ss_pred ---------------ccCCCCHHHHHHHHHHHHHHHhhceEEeecCCCEEEEeCcccccCCCCCCCCCCCCCceEEEE
Confidence 01122366789999999999999999999999999999999999999996 335655544
No 12
>1jr7_A GABT protein, hypothetical 37.4 kDa protein in ILEY-GABD interg region; gamma amino-butyric acid metabolism, GABA; 2.00A {Escherichia coli} SCOP: b.82.2.3 PDB: 2r6s_A*
Probab=99.91 E-value=3.1e-24 Score=194.73 Aligned_cols=205 Identities=17% Similarity=0.222 Sum_probs=138.4
Q ss_pred hHHHHHHHHHh--cCeEEEeCCC--CCCCHHHHHHHHHHhCCC-CCCC----ccCCCCceeecCccccCCC---CCCCCC
Q 020129 49 QKPFLDSLLLK--AGSVLFRGFD--DVKTAKEFNDVVEAFGYE-ELPY----VGGAAPRTNIVGRVFTANE---SPPDQK 116 (330)
Q Consensus 49 ~~~~l~~~l~~--~G~vl~rg~~--~~~~~~~~~~~~~~fG~~-~~~~----~g~~~~r~~~~~~v~~~~~---~p~~~~ 116 (330)
..++|.+.+.. +|+++|.+.+ ...+++.+.+++++||.+ ..+. .|....+..+.......+- .++ .
T Consensus 65 l~~~l~~i~~~r~~G~~~i~~~~~~~~~~~~~~~~l~~riG~i~r~t~~D~~yG~~~a~f~V~~~~~~~~~l~~AYT--~ 142 (311)
T 1jr7_A 65 LQPLLLKTLLNRAEGALLINAVGVDDVKQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHR--V 142 (311)
T ss_dssp HHHHHHHHHHCTTCCEEEEEETTCCSGGGHHHHHHHHHHHHHHHEEECCBTTTTBSSEEEEECCC-----CTTCTTC--C
T ss_pred HHHHHHHHHHHhceeEEEEEccCCCCCCCHHHHHHHHHHheeccccCCcccCCCceEeeEEEEecCCccccchhhcc--C
Confidence 35666665543 8977776554 124778899999999988 4443 4432122334332222222 223 8
Q ss_pred cccccCCCCCCCCCceEEec-ccccCCCCCccccccHHHHHHHhhhhCchHHHH-----HhhcCeEEEEEcCCCCCCCCC
Q 020129 117 IPFHHEMAQVPEFPSKLFFF-CEVEPGSGGETPIVLSHIVYERMKHKYPDFVEQ-----LEQHGLIYTRVLGEKDDPSSP 190 (330)
Q Consensus 117 l~~H~D~sy~~~~P~~~~l~-c~~~p~~GGeT~~~d~~~~~~~L~~~~pel~~~-----L~~~~v~~~~~~~~~~~~~~~ 190 (330)
++||||++|.+.+|++++|+ |++.+.+||+|.| |.+++|+.++. |.+..+.|.. +..
T Consensus 143 L~lHTDg~Y~~~~pg~qlLH~Cl~~~~~GGeS~l---------Lr~~dPe~f~~~~~~~L~~~~v~~~~--~~~------ 205 (311)
T 1jr7_A 143 MELHNDGTYVEEITDYVLMMKIDEQNMQGGNSLL---------LHLDDWEHLDNYFRHPLARRPMRFAA--PPS------ 205 (311)
T ss_dssp EEEECSCTTSSSCCCEEEEEEEEEESCCBCCEEE---------EEGGGCTTHHHHHTSGGGGSCEEECC--SSC------
T ss_pred CCcccCCCCCCCCccHHHHHHHHhccCCCceeee---------chhhCHHHHhcccccCceeceEEeec--cCC------
Confidence 99999999999999999999 9999999999999 99999999999 9987777642 111
Q ss_pred CCCCcccccccCChhHHHHHHHHhCCcEEEecCCceEEEEeeeceEEecCCCCceEEEecchhhccCCCCCCCCCCcccc
Q 020129 191 IGRGWKSTFLTEDKSIAEERAARLGMKLEWMEDGGVKTIMGPIPAIKYDESRQRKIWFNSMVAAYTGWKDDRNDPVKAVT 270 (330)
Q Consensus 191 ~~~~w~~~f~~~d~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~P~v~~hp~TG~~~~~n~~~~~~~~~~~~~~~~~~~~~ 270 (330)
++ ......+|+|..++ .|+.+ ++.+.... .
T Consensus 206 --------------------------------~~--~~~~~~~PVi~ld~-~G~l~-IRyn~~~r------------~-- 235 (311)
T 1jr7_A 206 --------------------------------KN--VSKDVFHPVFDVDQ-QGRPV-MRYIDQFV------------Q-- 235 (311)
T ss_dssp --------------------------------TT--CCCCEEECSEEECT-TSCEE-ECCCTTTE------------E--
T ss_pred --------------------------------Cc--eeeEeecCEEEECC-CCCEE-EEeCCCCC------------C--
Confidence 00 01133469999876 48775 32211100 0
Q ss_pred cCCCCCCCHHHHHHHHHHHhh--ceeecccCCCCEEEEecccccccCCCCC---CC-cee
Q 020129 271 FGNGKPLPADIVHDCLNILEE--ESVAIPWQKGDVLLIDNWAVLHARRSFN---PP-RRI 324 (330)
Q Consensus 271 ~gdg~~~~~~~l~~l~~~~~~--~~~~~~W~~GDvli~DN~~vlHgR~~f~---g~-R~i 324 (330)
.-+.....++..|.+.+.+ +.+.|+|+|||+||+||+|+||||++|+ |. |.+
T Consensus 236 --p~~~~~~~Yl~~f~~~l~dp~~~~~~kL~pGd~vifDN~RvLHGR~aF~~~~g~~R~L 293 (311)
T 1jr7_A 236 --PKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRREL 293 (311)
T ss_dssp --CCSHHHHHHHHHHHHHHHTCTTCEEECCCTTCEEEEETTTEEEEECCBCCCTTCEEEE
T ss_pred --CHHHHHHHHHHHHHHHhcCcccEEEEEcCCCcEEEEeCCccccCcCCcCCCCCCceEE
Confidence 0111113347788887776 4699999999999999999999999997 44 555
No 13
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=76.91 E-value=3.5 Score=36.92 Aligned_cols=31 Identities=16% Similarity=0.268 Sum_probs=25.5
Q ss_pred HHHhhceeecccCCCCEEEEecccccccCCCC
Q 020129 287 NILEEESVAIPWQKGDVLLIDNWAVLHARRSF 318 (330)
Q Consensus 287 ~~~~~~~~~~~W~~GDvli~DN~~vlHgR~~f 318 (330)
..++...+.+.++|||+|++| ..++||..+.
T Consensus 227 ~~le~~~~ewd~epGDav~F~-~~tlHga~pl 257 (344)
T 3nnf_A 227 YTIKDGYEEDEYNLGDAFFFN-KYVLHQSVPL 257 (344)
T ss_dssp HHHTTCEEECCBCTTCEEEEE-TTCEEEECCB
T ss_pred hhhhhhhccccCCCCcEEEEe-cceeecCCCC
Confidence 346778899999999999997 5688998754
No 14
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=69.31 E-value=3.1 Score=36.65 Aligned_cols=33 Identities=27% Similarity=0.353 Sum_probs=25.3
Q ss_pred ceeecccCCCCEEEEecccccccCCCCC-C-Cceee
Q 020129 292 ESVAIPWQKGDVLLIDNWAVLHARRSFN-P-PRRIL 325 (330)
Q Consensus 292 ~~~~~~W~~GDvli~DN~~vlHgR~~f~-g-~R~il 325 (330)
..+....++||++|+|.+ ++||..+=. + .|+.+
T Consensus 226 ~~v~~~~~aGd~~~f~~~-~~H~s~~N~s~~~R~~~ 260 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGE-VVHKSKQNLSDRSRQAY 260 (291)
T ss_dssp GCEEECBCTTCEEEEETT-CEEEECCBCSSSCCCEE
T ss_pred CeeecccCCCcEEEEcCC-ceecCCCCCCCCceEEE
Confidence 457889999999999996 999986543 3 55533
No 15
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=63.25 E-value=7.2 Score=34.90 Aligned_cols=32 Identities=28% Similarity=0.376 Sum_probs=24.4
Q ss_pred eeecccCCCCEEEEecccccccCCCC-CC-Cceee
Q 020129 293 SVAIPWQKGDVLLIDNWAVLHARRSF-NP-PRRIL 325 (330)
Q Consensus 293 ~~~~~W~~GDvli~DN~~vlHgR~~f-~g-~R~il 325 (330)
.+....++||++|+|.+ ++||..+= ++ .|+.+
T Consensus 229 ~v~~~~~aGdvl~f~~~-~~H~s~~N~S~~~R~~l 262 (310)
T 3emr_A 229 ISVPTGKAGSVTLFESN-TMHGSTSNITPYPRNNL 262 (310)
T ss_dssp CBCCCBSTTCEEEEETT-CCEEECCCCSSCCCCEE
T ss_pred eEEeeeCCceEEEEeCC-ceecCCCCCCCCCeEEE
Confidence 57789999999999995 89987653 33 55533
No 16
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=60.15 E-value=5.2 Score=34.99 Aligned_cols=25 Identities=24% Similarity=0.373 Sum_probs=21.5
Q ss_pred eeecccCCCCEEEEecccccccCCCC
Q 020129 293 SVAIPWQKGDVLLIDNWAVLHARRSF 318 (330)
Q Consensus 293 ~~~~~W~~GDvli~DN~~vlHgR~~f 318 (330)
.+....++||++|+|. +++||..+=
T Consensus 210 ~v~~~~~aGdv~lf~~-~~~H~s~~N 234 (288)
T 2rdq_A 210 LLHSPMEPGDILLFHA-HMCHKSIPN 234 (288)
T ss_dssp EECCCCCTTCEEEEET-TCCEEEECC
T ss_pred eeecccCCCCEEEEeC-CceecCCCC
Confidence 4788999999999999 599998664
No 17
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=59.63 E-value=5.7 Score=35.22 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=25.1
Q ss_pred ceeecccCCCCEEEEecccccccCCCC-CC-Cceee
Q 020129 292 ESVAIPWQKGDVLLIDNWAVLHARRSF-NP-PRRIL 325 (330)
Q Consensus 292 ~~~~~~W~~GDvli~DN~~vlHgR~~f-~g-~R~il 325 (330)
..+....++||++|+|. +++||..+= ++ .|+.+
T Consensus 214 ~~v~~~~~aGd~vlf~~-~~~H~s~~N~s~~~R~~~ 248 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHP-LLIHGSGQNKTQGFRKAI 248 (308)
T ss_dssp CCEEECBCTTCEEEECT-TCCEEECCBCSSSCEEEE
T ss_pred CeEEccCCCccEEEECC-CccccCCCCCCCCceEEE
Confidence 34788999999999999 599998764 33 55543
No 18
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=57.60 E-value=5.9 Score=33.53 Aligned_cols=37 Identities=22% Similarity=0.186 Sum_probs=31.0
Q ss_pred ceeecccCCCCEEEEec--------ccccccCCCC-CCCceeeeec
Q 020129 292 ESVAIPWQKGDVLLIDN--------WAVLHARRSF-NPPRRILASL 328 (330)
Q Consensus 292 ~~~~~~W~~GDvli~DN--------~~vlHgR~~f-~g~R~il~~~ 328 (330)
..+.+.-++|++|+|-| .+++|+..|- .|.|.++..+
T Consensus 169 ~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~W 214 (224)
T 2jig_A 169 RGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKW 214 (224)
T ss_dssp GSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEE
T ss_pred CceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEe
Confidence 35889999999999998 7999999997 5887777654
No 19
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=57.05 E-value=5.7 Score=33.70 Aligned_cols=36 Identities=14% Similarity=0.259 Sum_probs=30.4
Q ss_pred eeecccCCCCEEEEecc--------cccccCCCC-CCCceeeeec
Q 020129 293 SVAIPWQKGDVLLIDNW--------AVLHARRSF-NPPRRILASL 328 (330)
Q Consensus 293 ~~~~~W~~GDvli~DN~--------~vlHgR~~f-~g~R~il~~~ 328 (330)
.+.+.-++|++|+|.|. +++|+..|- .|.|.++..+
T Consensus 165 ~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W 209 (216)
T 3itq_A 165 NLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQW 209 (216)
T ss_dssp TEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEE
T ss_pred CCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEee
Confidence 47788899999999994 899999997 5888887754
No 20
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=57.01 E-value=7.4 Score=34.51 Aligned_cols=27 Identities=15% Similarity=0.323 Sum_probs=22.7
Q ss_pred ceeecccCCCCEEEEecccccccCCCCC
Q 020129 292 ESVAIPWQKGDVLLIDNWAVLHARRSFN 319 (330)
Q Consensus 292 ~~~~~~W~~GDvli~DN~~vlHgR~~f~ 319 (330)
..+....++||++|+|.+ ++||..+=.
T Consensus 218 ~~v~~~~~aGd~v~f~~~-l~H~s~~N~ 244 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWST-LMHASYPHS 244 (313)
T ss_dssp GCEEECBCTTEEEEEETT-SEEEECCBC
T ss_pred ceeEeeeCCceEEEEeCC-ceeeCCCCC
Confidence 358889999999999995 999987654
No 21
>1wdi_A Hypothetical protein TT0907; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: CIT; 2.10A {Thermus thermophilus} SCOP: e.53.1.1
Probab=46.37 E-value=7.2 Score=35.40 Aligned_cols=20 Identities=35% Similarity=0.456 Sum_probs=17.0
Q ss_pred ccCCCCEEEEecccccccCC
Q 020129 297 PWQKGDVLLIDNWAVLHARR 316 (330)
Q Consensus 297 ~W~~GDvli~DN~~vlHgR~ 316 (330)
-+++||+|++||.+|+-+|-
T Consensus 51 ~L~~GDlLV~NdTrVipARL 70 (345)
T 1wdi_A 51 FLRPGDVLVFNESKVIPARL 70 (345)
T ss_dssp HCCTTCEEEEEEEEECCEEE
T ss_pred hcCCCCEEEecCceEEeeEE
Confidence 36899999999999987763
No 22
>1vky_A S-adenosylmethionine:tRNA ribosyltransferase-ISOM; TM0574, struct genomics, JCSG, protein structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: e.53.1.1
Probab=45.98 E-value=7.8 Score=35.15 Aligned_cols=20 Identities=30% Similarity=0.423 Sum_probs=17.6
Q ss_pred ccCCCCEEEEecccccccCC
Q 020129 297 PWQKGDVLLIDNWAVLHARR 316 (330)
Q Consensus 297 ~W~~GDvli~DN~~vlHgR~ 316 (330)
-++|||+|++||.+|+-+|-
T Consensus 61 ~L~~GDlLV~NdTrVipARL 80 (347)
T 1vky_A 61 YLEPGDLLVLNVSKVIPARL 80 (347)
T ss_dssp GCCTTCEEEEEEEECCSCEE
T ss_pred hcCCCCEEEecCceEEeeEE
Confidence 57899999999999987774
No 23
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=43.61 E-value=7.3 Score=35.39 Aligned_cols=20 Identities=40% Similarity=0.579 Sum_probs=17.6
Q ss_pred ccCCCCEEEEecccccccCC
Q 020129 297 PWQKGDVLLIDNWAVLHARR 316 (330)
Q Consensus 297 ~W~~GDvli~DN~~vlHgR~ 316 (330)
-+++||+|++||.+|+-+|-
T Consensus 53 ~L~~GDlLV~NdTrVipARL 72 (346)
T 1yy3_A 53 FFNEGDCLVLNNTRVLPARL 72 (346)
T ss_dssp GCCTTEEEEECCCCSCCEEE
T ss_pred hcCCCCEEEecCceEEeeEE
Confidence 57899999999999987774
No 24
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=36.71 E-value=21 Score=31.90 Aligned_cols=27 Identities=11% Similarity=0.244 Sum_probs=21.4
Q ss_pred ceeecccCCCCEEEEecccccccCCCCC
Q 020129 292 ESVAIPWQKGDVLLIDNWAVLHARRSFN 319 (330)
Q Consensus 292 ~~~~~~W~~GDvli~DN~~vlHgR~~f~ 319 (330)
..+....++||+||+|.+ ++||..+=.
T Consensus 220 ~~v~~~~~aGd~v~f~~~-~~H~s~~N~ 246 (319)
T 3gja_A 220 QAYPMVLKPGEAVIFWSN-TMHASLPHT 246 (319)
T ss_dssp -CCBCCBCTTEEEEEETT-SCEEECCCC
T ss_pred ceeEeeECCCeEEEEcCC-ccccCCCCC
Confidence 357889999999999985 889876543
No 25
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=29.06 E-value=31 Score=28.68 Aligned_cols=32 Identities=25% Similarity=0.483 Sum_probs=24.5
Q ss_pred eecccCCCCEEEEecccccccC-CCCCCCceeee
Q 020129 294 VAIPWQKGDVLLIDNWAVLHAR-RSFNPPRRILA 326 (330)
Q Consensus 294 ~~~~W~~GDvli~DN~~vlHgR-~~f~g~R~il~ 326 (330)
-.+.|++|.++++|. ...|.. +.-++.|.+|+
T Consensus 146 ~~~~w~eGe~~~fDd-s~~Hev~N~~d~~RvvL~ 178 (197)
T 3rcq_A 146 ETKTWEEGKVLIFDD-SFEHEVWQDASSFRLIFI 178 (197)
T ss_dssp EEECCCBTCEEEECT-TSCEEEEECSSSCEEEEE
T ss_pred EEEEeeCCcEEEEcC-CeEEEEEECCCCCEEEEE
Confidence 467999999999999 566765 45566787765
No 26
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=26.41 E-value=28 Score=27.11 Aligned_cols=12 Identities=25% Similarity=0.481 Sum_probs=10.5
Q ss_pred ccCCCCEEEEec
Q 020129 297 PWQKGDVLLIDN 308 (330)
Q Consensus 297 ~W~~GDvli~DN 308 (330)
..||||+|+|.+
T Consensus 89 ~~~pGDlvff~~ 100 (142)
T 3gt2_A 89 QARKGDLIFYGP 100 (142)
T ss_dssp GCCTTCEEEESG
T ss_pred hCCCCCEEEeCC
Confidence 689999999974
No 27
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=25.73 E-value=73 Score=27.38 Aligned_cols=41 Identities=12% Similarity=0.155 Sum_probs=25.6
Q ss_pred CCcccccCCCCCCCCC-ceEEeccccc-CCCCCccccccHHHH
Q 020129 115 QKIPFHHEMAQVPEFP-SKLFFFCEVE-PGSGGETPIVLSHIV 155 (330)
Q Consensus 115 ~~l~~H~D~sy~~~~P-~~~~l~c~~~-p~~GGeT~~~d~~~~ 155 (330)
...+||.|..|....| .+.+..++.. +...|.+.++-+-.-
T Consensus 135 ~~~~wHqD~~~~~~~~~~v~~wiaL~d~~~enG~l~vvPGSH~ 177 (288)
T 2rdq_A 135 YLTPFHQDGFYIGPNQDFRTFWIPLIRTTRESGGVALADGSHR 177 (288)
T ss_dssp TSCCSBCHHHHSCSCCCCEEEEEESSCCCTTTCEEEEETTTTS
T ss_pred CCcCccccccccCCCCCeEEEEEECCCCCccCCcEEEEeCCcc
Confidence 4678999998764333 4455555553 345677777766543
No 28
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=25.45 E-value=41 Score=28.19 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=26.1
Q ss_pred eecccCCCCEEEEecccccccCCCCCC-Cceeeee
Q 020129 294 VAIPWQKGDVLLIDNWAVLHARRSFNP-PRRILAS 327 (330)
Q Consensus 294 ~~~~W~~GDvli~DN~~vlHgR~~f~g-~R~il~~ 327 (330)
..+.=++||+|||-.+ +.|+..++.+ ..|+-+|
T Consensus 169 ~~i~P~~G~lvlFpS~-l~H~V~p~~~~~~RiSIs 202 (216)
T 2rg4_A 169 RSVAPKVGDVLLWESW-LRHEVPMNMAEEDRISVS 202 (216)
T ss_dssp EEECCCTTEEEEEETT-SCEEECCCCSSSCEEEEE
T ss_pred eEecCCCCeEEEECCC-CEEeccCCCCCCCEEEEE
Confidence 4678899999999777 9999999876 4555544
No 29
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=24.72 E-value=26 Score=29.57 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=25.6
Q ss_pred CCcccccCCCCCCCC-----CceEEecccccCCCCCcccccc
Q 020129 115 QKIPFHHEMAQVPEF-----PSKLFFFCEVEPGSGGETPIVL 151 (330)
Q Consensus 115 ~~l~~H~D~sy~~~~-----P~~~~l~c~~~p~~GGeT~~~d 151 (330)
....+|.|......+ -..+++..+..+..||+|.|-+
T Consensus 122 ~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~ 163 (216)
T 3itq_A 122 QQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPK 163 (216)
T ss_dssp CCEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETT
T ss_pred CccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecC
Confidence 345689997654321 1266777777778999999965
No 30
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=23.89 E-value=34 Score=29.69 Aligned_cols=22 Identities=32% Similarity=0.363 Sum_probs=19.9
Q ss_pred ccCCCCEEEEecccccccCCCC
Q 020129 297 PWQKGDVLLIDNWAVLHARRSF 318 (330)
Q Consensus 297 ~W~~GDvli~DN~~vlHgR~~f 318 (330)
-.++||.+++|-.+++|+.+|.
T Consensus 203 l~~p~d~llv~D~~~~H~vTpI 224 (254)
T 3pl0_A 203 LEQPWTVLLLDDQQVIHESTPL 224 (254)
T ss_dssp CCSTTCEEEEETTTEEEEECCE
T ss_pred ecCCCcEEEEeCCcccCCCCcc
Confidence 4589999999999999999876
No 31
>2jov_A Hypothetical protein CPE0013; alpha + beta sandwich, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens} SCOP: d.349.1.1
Probab=23.60 E-value=68 Score=22.76 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=30.0
Q ss_pred CCCCCCCHHHHHHHHHHHhhceeecccCCCCEEEEe
Q 020129 272 GNGKPLPADIVHDCLNILEEESVAIPWQKGDVLLID 307 (330)
Q Consensus 272 gdg~~~~~~~l~~l~~~~~~~~~~~~W~~GDvli~D 307 (330)
.-..++|.+.+.++.+.+.+..+.-+-+.||+++=|
T Consensus 24 KT~~pIPK~~i~e~m~~l~~i~V~APV~iGDVIi~n 59 (85)
T 2jov_A 24 KSNKPVEISKWIDFSNVLSRLYVGVPTKSGNVVCKN 59 (85)
T ss_dssp EEEEEECHHHHHHHHHHHTTCEECCCCCSSEEEEES
T ss_pred ccCCCCCHHHHHHHHHHHhCCEEcCCcccCCEEEec
Confidence 344578899999999999999999999999977654
No 32
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=21.38 E-value=92 Score=26.79 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=22.3
Q ss_pred HHHHHHHHhcCeEEEeCCCCCCCHHHHHHHHHHh
Q 020129 51 PFLDSLLLKAGSVLFRGFDDVKTAKEFNDVVEAF 84 (330)
Q Consensus 51 ~~l~~~l~~~G~vl~rg~~~~~~~~~~~~~~~~f 84 (330)
++..+.+.+.|+++++|+= ++++..++.+.+
T Consensus 6 ~e~~~~f~~dGyvvl~~~l---~~e~v~~l~~~~ 36 (291)
T 2opw_A 6 PSQLQKFQQDGFLVLEGFL---SAEECVAMQQRI 36 (291)
T ss_dssp HHHHHHHHHHSEEEETTSS---CHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEecCCC---CHHHHHHHHHHH
Confidence 3456679999999999963 776666655543
No 33
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=20.59 E-value=42 Score=28.05 Aligned_cols=37 Identities=22% Similarity=0.149 Sum_probs=24.3
Q ss_pred CCcccccCCCCCCC--------CCceEEecccccCCCCCcccccc
Q 020129 115 QKIPFHHEMAQVPE--------FPSKLFFFCEVEPGSGGETPIVL 151 (330)
Q Consensus 115 ~~l~~H~D~sy~~~--------~P~~~~l~c~~~p~~GGeT~~~d 151 (330)
....+|.|...... .-.++++.-+..+..||+|.|-+
T Consensus 109 ~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~ 153 (224)
T 2jig_A 109 QKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPN 153 (224)
T ss_dssp CCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETT
T ss_pred ccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCC
Confidence 34568999765431 11255666666677899999965
No 34
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=20.24 E-value=35 Score=26.47 Aligned_cols=11 Identities=27% Similarity=0.595 Sum_probs=9.9
Q ss_pred ccCCCCEEEEe
Q 020129 297 PWQKGDVLLID 307 (330)
Q Consensus 297 ~W~~GDvli~D 307 (330)
.+||||+|+|.
T Consensus 67 ~l~pGDLvFf~ 77 (135)
T 2k1g_A 67 NLRTGDLVLFR 77 (135)
T ss_dssp GCCTTEEEEEE
T ss_pred HccCCcEEEEC
Confidence 78999999996
Done!