BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020131
(330 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224117346|ref|XP_002331723.1| predicted protein [Populus trichocarpa]
gi|222874815|gb|EEF11946.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/319 (75%), Positives = 275/319 (86%), Gaps = 3/319 (0%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRKKLKDELE KNTVQEY CPNC RRYNALDALRL+SL D+ FHCENC+GELVAESDKLA
Sbjct: 143 MRKKLKDELEDKNTVQEYTCPNCGRRYNALDALRLMSLVDEYFHCENCDGELVAESDKLA 202
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
AQEGGDGDDNARRRRREKLKD+LQK+EV LKPLM Q++RVKDL VPEFG+LQ W+ ASA
Sbjct: 203 AQEGGDGDDNARRRRREKLKDMLQKMEVQLKPLMAQLSRVKDLPVPEFGSLQEWQIHASA 262
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
AGRAANGDSS NDP++SSQGYGGTPMPFLG+TKVEV+FSG EGK+ D+KSET ST KVL
Sbjct: 263 AGRAANGDSSYNDPSRSSQGYGGTPMPFLGETKVEVSFSGVEGKE-DLKSETASTGLKVL 321
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYAA 240
PPWMIKQGMNLTKEQRGEVKQ SKMD SSA DDKK ++E+D ++DEY++AYYAA
Sbjct: 322 PPWMIKQGMNLTKEQRGEVKQGSKMDDSSAAAEPPDDKKISIENDD-KIKDEYVKAYYAA 380
Query: 241 LLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKR-EEVEGDDDVDWEEAPVA 299
LL+KQ+E +E+A+ QQE T IS+G S +SS+RQVGMKSKR E+ E DDDV+WEEAP+
Sbjct: 381 LLQKQREAEESAEKQQELLQTSISNGFSKSSSDRQVGMKSKREEDDEPDDDVEWEEAPIG 440
Query: 300 GTTSESFKVHDLNVEAEAS 318
G TSE FKV+DLN EA AS
Sbjct: 441 GNTSEGFKVNDLNAEAPAS 459
>gi|359484994|ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
vinifera]
gi|297735317|emb|CBI17757.3| unnamed protein product [Vitis vinifera]
Length = 475
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/321 (74%), Positives = 280/321 (87%), Gaps = 3/321 (0%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+KKLKDELE KNTVQEYICPNC +RYNALDALRL+S+ED+ FHCE+CNGELVAESDKLA
Sbjct: 143 MKKKLKDELEDKNTVQEYICPNCGKRYNALDALRLISMEDEYFHCESCNGELVAESDKLA 202
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
+QE GDGDDNARRRRREKLKD+LQK+EV LKPLM+Q++RVKDL VPEFG+LQAWEARA+A
Sbjct: 203 SQEIGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQLSRVKDLPVPEFGSLQAWEARANA 262
Query: 121 AGRAANGDSSSNDPNKSSQ--GYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQK 178
AGRAANGDS++ND +KSSQ G+GGTPMPF+G+TKVEVAFSG K+ D KSE + K
Sbjct: 263 AGRAANGDSNANDSSKSSQGLGFGGTPMPFVGETKVEVAFSGVGVKEEDSKSEIANASLK 322
Query: 179 VLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTV-EDDKASLQDEYIRAY 237
VLPPWMIK+GMNLTKEQRGE+KQESKM SSA G SDDKKST +D++ +LQDEY++AY
Sbjct: 323 VLPPWMIKEGMNLTKEQRGEIKQESKMGSSSAPLGSSDDKKSTTNKDEEKNLQDEYVKAY 382
Query: 238 YAALLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWEEAP 297
YAA+LK+QQE +EAAK Q E SN IS+ + G SSNRQVGMKSKR+E EGDDD +WEEAP
Sbjct: 383 YAAILKRQQEQEEAAKKQLELSNAHISNSVLGTSSNRQVGMKSKRDEDEGDDDFEWEEAP 442
Query: 298 VAGTTSESFKVHDLNVEAEAS 318
AG SESFKV+DLNV+A+AS
Sbjct: 443 TAGNKSESFKVNDLNVQADAS 463
>gi|449440903|ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
sativus]
Length = 475
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/318 (71%), Positives = 267/318 (83%), Gaps = 3/318 (0%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+KKLKDELE KNTVQEYICPNC RRY ALDALRL+S ED+ FHCENCNGELVAESDKLA
Sbjct: 144 MKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISFEDEYFHCENCNGELVAESDKLA 203
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
A +G DGDDN R+RR EKLKD+LQK+E LKPL+EQ++RVKDL VPEFGTL AWEARASA
Sbjct: 204 AVQGVDGDDNVRKRRHEKLKDMLQKMEAQLKPLVEQLSRVKDLPVPEFGTLLAWEARASA 263
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
A R NGD + NDP+KSSQGYGGTPMPF+G+TKVEVAFSGAEG VD KSE+++T KVL
Sbjct: 264 AARGINGDLNGNDPSKSSQGYGGTPMPFVGETKVEVAFSGAEGTGVDAKSESENTSLKVL 323
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTV-EDDKASLQDEYIRAYYA 239
PPWMIK+GMNLTKEQRGEVK ESK D SA+ SDDKKS +DDK ++QDEY++AYYA
Sbjct: 324 PPWMIKKGMNLTKEQRGEVKDESKTDAGSASAQFSDDKKSLANDDDKTNIQDEYVKAYYA 383
Query: 240 ALLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWEEAPVA 299
A+LKKQQEL+EAAK QQE S+T +++ ++ +S+RQVGMK+KREE E DD EEAP+
Sbjct: 384 AILKKQQELEEAAKGQQELSSTEVTESVANTNSSRQVGMKAKREEDEDDDIEW-EEAPIG 442
Query: 300 GTTSESFKVHDLNVEAEA 317
G +E++KV DLNVEA A
Sbjct: 443 GNANENYKV-DLNVEASA 459
>gi|356516908|ref|XP_003527134.1| PREDICTED: general transcription factor IIE subunit 1-like [Glycine
max]
Length = 469
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/319 (66%), Positives = 248/319 (77%), Gaps = 10/319 (3%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+K LKDEL+ KNT++EYIC C +RYNALDALRLVS EDD FHCE+CNG+L E+DK
Sbjct: 143 MKKLLKDELDNKNTIEEYICTKCGKRYNALDALRLVSFEDDDFHCESCNGKLEVENDKFV 202
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
AQEGGDGD+NARRRR EKLKD+LQK+E LKPLM+Q++RVKDL VPEFG+L AWEARASA
Sbjct: 203 AQEGGDGDENARRRRHEKLKDMLQKMEAQLKPLMDQLSRVKDLPVPEFGSLLAWEARASA 262
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
GRAANGD S D S GY G PMP+ GDTKV V F+G E + DVKSET S KVL
Sbjct: 263 MGRAANGDMSG-DSKMSQLGYNGAPMPYSGDTKVVVDFNGTEDIK-DVKSETGSASLKVL 320
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSATGG--LSDDKKSTVE-DDKASLQDEYIRAY 237
PPWMIK GM LTKEQRGE K+E KMDG+S + DDKKSTV+ DDK ++QDEYI+AY
Sbjct: 321 PPWMIKSGMVLTKEQRGEAKEEIKMDGTSTSSSAQYLDDKKSTVDHDDKKNIQDEYIKAY 380
Query: 238 YAALLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWEEAP 297
YAALLK+Q EL+ A+K QE NT ++ S ++SNRQVGMKSK E E DD +WEEAP
Sbjct: 381 YAALLKQQHELEAASK--QELPNTLTANDPSSSASNRQVGMKSKLE--EDDDGTEWEEAP 436
Query: 298 VAGTTSESFKVHDLNVEAE 316
VAG +E++KV DLNVEA+
Sbjct: 437 VAGIGNENYKV-DLNVEAD 454
>gi|356567702|ref|XP_003552056.1| PREDICTED: uncharacterized protein LOC100799341 [Glycine max]
Length = 469
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/317 (66%), Positives = 248/317 (78%), Gaps = 10/317 (3%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+K LKDEL+ KNT++EYIC C +RYNALDALRLVS EDD FHCE+CNG+L ESDK
Sbjct: 143 MKKLLKDELDNKNTIEEYICRKCGKRYNALDALRLVSFEDDDFHCESCNGKLEVESDKFV 202
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
AQEGGDGD+NARR R EKLKD+LQK+E LKPLM+Q++RVKDL VPEFG+L AWEARASA
Sbjct: 203 AQEGGDGDENARRWRHEKLKDMLQKMEAQLKPLMDQLSRVKDLPVPEFGSLLAWEARASA 262
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
GRAANGD S D S GY G MP+ GDTKV V F+G E + DVKSET ST KVL
Sbjct: 263 MGRAANGDISG-DSKMSQLGYNGAAMPYSGDTKVVVDFNGTEDTK-DVKSETGSTSLKVL 320
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGS--SATGGLSDDKKSTVE-DDKASLQDEYIRAY 237
PPWMIK GM LTKEQRGEVK+E KMDG+ S + DDKKSTV+ DDK ++QDEYI+AY
Sbjct: 321 PPWMIKSGMVLTKEQRGEVKEEMKMDGTSISTSAQYLDDKKSTVDHDDKRNIQDEYIKAY 380
Query: 238 YAALLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWEEAP 297
YAALLK+Q EL+ A+K QE SNT ++ S ++SNRQVGMKSK E E DD +WEEAP
Sbjct: 381 YAALLKQQHELEAASK--QELSNTLTANDPSSSASNRQVGMKSKLE--EDDDGTEWEEAP 436
Query: 298 VAGTTSESFKVHDLNVE 314
VAGT +E++KV DLNV+
Sbjct: 437 VAGTGNENYKV-DLNVQ 452
>gi|224108211|ref|XP_002314760.1| predicted protein [Populus trichocarpa]
gi|222863800|gb|EEF00931.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/321 (64%), Positives = 246/321 (76%), Gaps = 32/321 (9%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRK +KDELE N VQ+YICP FHCENC+G LVAESDKLA
Sbjct: 129 MRKMIKDELENNNAVQQYICPIY-------------------FHCENCDGVLVAESDKLA 169
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
AQEGGDGDDNAR+RRREKLKD+LQ +EV LKPLM+Q++RVKDL +PE G+LQAW+ +A
Sbjct: 170 AQEGGDGDDNARKRRREKLKDMLQNMEVQLKPLMDQLSRVKDLPIPEIGSLQAWQLHENA 229
Query: 121 AGRAANGDSSSNDPNKSSQ--GYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQK 178
AGRA NGD +S+D K SQ GYGGTPMPFLG+TKVEVAF+G E K+ ++KSET ST K
Sbjct: 230 AGRATNGDPNSDDHFKYSQGPGYGGTPMPFLGETKVEVAFAGDESKE-NIKSETASTSLK 288
Query: 179 VLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYY 238
VLPPWMIKQGMNLTKEQRGEVKQESKMD SS SD+KKS E EY++AYY
Sbjct: 289 VLPPWMIKQGMNLTKEQRGEVKQESKMDSSSTAVEFSDEKKSAKE--------EYVKAYY 340
Query: 239 AALLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWEEAPV 298
AALL++Q++ +E+AK QQE S T +S+GLS +SSNRQVGMKSKREE EGDDDV+WEEAP+
Sbjct: 341 AALLEQQRQAEESAKQQQELSQTSMSNGLSESSSNRQVGMKSKREEGEGDDDVEWEEAPI 400
Query: 299 AGTTSESFKVHDLNVEAEASA 319
G +ES++++DLN EA AS
Sbjct: 401 EG--NESYRLNDLNDEAPASG 419
>gi|356563109|ref|XP_003549808.1| PREDICTED: general transcription factor IIE subunit 1-like [Glycine
max]
Length = 469
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/315 (67%), Positives = 247/315 (78%), Gaps = 12/315 (3%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+ KLKDELE KNT+QEYIC NC +RYNALDALRLVS ED+ FHCE+CNG L ESDK+A
Sbjct: 143 MKHKLKDELENKNTLQEYICSNCGKRYNALDALRLVSFEDEDFHCESCNGRLEVESDKIA 202
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
QEGGDGDDNARRRRREKLKD+LQK+EV LKPLM+Q++RVKDL VPEFG+LQAWEARASA
Sbjct: 203 VQEGGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQLSRVKDLPVPEFGSLQAWEARASA 262
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
A RAANGD ++ D S GY G +P+ GDTKV V F+ EGK VKSETDST KVL
Sbjct: 263 AVRAANGDINAGDSKISQLGYNG--VPYSGDTKVVVDFN-TEGKGEGVKSETDSTSLKVL 319
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGL--SDDKKSTV-EDDKASLQDEYIRAY 237
PPWMI GMNLTKEQRGEVKQE+KMD +S + + +DDKK T+ D+ ++QDEYI+AY
Sbjct: 320 PPWMITSGMNLTKEQRGEVKQETKMDETSTSTAVQYTDDKKLTIGHDNNQNIQDEYIKAY 379
Query: 238 YAALLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWEEAP 297
YAALL KQ EL+EAAK Q NT +D S ++SNRQVGMKSKRE E DD +WEEAP
Sbjct: 380 YAALL-KQHELEEAAKKQ--LPNTLAADDPSSSTSNRQVGMKSKRE--EDDDCTEWEEAP 434
Query: 298 VAGTTSESFKVHDLN 312
+AG + +KV DLN
Sbjct: 435 IAGNGNGGYKV-DLN 448
>gi|356511599|ref|XP_003524511.1| PREDICTED: uncharacterized protein LOC100810405 [Glycine max]
Length = 471
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 211/315 (66%), Positives = 247/315 (78%), Gaps = 11/315 (3%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+ KLKDELE KNT+QEYICPNC +RYNALDALRLVS ED+ FHCE+CNG L ESDK+A
Sbjct: 143 MKHKLKDELENKNTLQEYICPNCGKRYNALDALRLVSFEDEDFHCESCNGRLEVESDKIA 202
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
AQE GDGDDNARRRRREKLKD+LQK+EV LKPLM+Q++RVKDL VPEFG+LQAWEARASA
Sbjct: 203 AQERGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQLSRVKDLPVPEFGSLQAWEARASA 262
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
A RAANGD ++ D S GY G +P+ GDTKV V F+ EGK VKSETDST KVL
Sbjct: 263 AVRAANGDINAGDSKISQPGYNG--VPYSGDTKVVVDFN-TEGKGEGVKSETDSTSLKVL 319
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSATGG--LSDDKKSTV-EDDKASLQDEYIRAY 237
PPWMI GMNLTKEQRGEVKQE+KMDG+S + +DDKKST+ D+ ++QDEYI+AY
Sbjct: 320 PPWMITSGMNLTKEQRGEVKQETKMDGTSTSTAAQYTDDKKSTIGHDNNQNIQDEYIKAY 379
Query: 238 YAALLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWEEAP 297
YAALLK+Q EL+EAAK Q SNT + S ++S RQVGMKSKREE + D + EEAP
Sbjct: 380 YAALLKQQHELEEAAKKQL--SNTLAAANPSSSTSIRQVGMKSKREEDDDDTEW--EEAP 435
Query: 298 VAGTTSESFKVHDLN 312
+AG + + V DLN
Sbjct: 436 IAGNGNGGYTV-DLN 449
>gi|115475996|ref|NP_001061594.1| Os08g0343300 [Oryza sativa Japonica Group]
gi|38637014|dbj|BAD03272.1| unknown protein [Oryza sativa Japonica Group]
gi|113623563|dbj|BAF23508.1| Os08g0343300 [Oryza sativa Japonica Group]
gi|125561187|gb|EAZ06635.1| hypothetical protein OsI_28884 [Oryza sativa Indica Group]
gi|125603072|gb|EAZ42397.1| hypothetical protein OsJ_26976 [Oryza sativa Japonica Group]
gi|215695399|dbj|BAG90590.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 462
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 182/319 (57%), Positives = 230/319 (72%), Gaps = 12/319 (3%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+KKLKDEL+ +NT+Q YICPNC++RY+A DAL+L+S D+ FHCENCNGELVAESDKLA
Sbjct: 145 MKKKLKDELDSRNTIQHYICPNCKKRYSAFDALQLISYTDEYFHCENCNGELVAESDKLA 204
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++E GDGDDNAR+RRREKLKD+ Q+++ LKPL Q+NRVKDL PEFG+LQ+WE RA+
Sbjct: 205 SEEMGDGDDNARKRRREKLKDMQQRIDEQLKPLQAQLNRVKDLPAPEFGSLQSWE-RAN- 262
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
G D S+ D +++ QG GTPMP+LG+TKVEVA SG K +S T+ KVL
Sbjct: 263 IGAFGTADPSAADSSRNPQGQYGTPMPYLGETKVEVALSGTGVKDEGAESGTNGNGLKVL 322
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYAA 240
PPWMIKQGMNLTKEQRGE S +D S + D+KK ++D+ S+QDEYI+AYY A
Sbjct: 323 PPWMIKQGMNLTKEQRGETSNSSNLDEKSE---VKDEKKQDSKEDEKSIQDEYIKAYYEA 379
Query: 241 LLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWEEAPVAG 300
L K+Q E + K QQE S + S RQVGMKSKRE + D+ V+WEE AG
Sbjct: 380 LRKRQDEEEAKRKIQQEGDTFA-----SASHSERQVGMKSKRE--DDDEGVEWEEEQPAG 432
Query: 301 TTSESFKVHDLNVEAEASA 319
T+E++K+ DLNVEA+ S
Sbjct: 433 NTAETYKLADLNVEAQESG 451
>gi|297843136|ref|XP_002889449.1| transcription initiation factor IIE alpha subunit family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297335291|gb|EFH65708.1| transcription initiation factor IIE alpha subunit family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 480
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 198/320 (61%), Positives = 242/320 (75%), Gaps = 16/320 (5%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+K+LKDELE KNTVQEY CPNCQR+YNALDALRL+S+EDDSFHCENCNGELV E +KL
Sbjct: 149 MKKRLKDELEDKNTVQEYGCPNCQRKYNALDALRLISMEDDSFHCENCNGELVVECNKLT 208
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++E DGDDNARRRRREKLK++LQKLEV +KPLM+Q+NRVKDL +PEFG+ AWEARA+
Sbjct: 209 SEEVVDGDDNARRRRREKLKNMLQKLEVQMKPLMDQLNRVKDLPIPEFGSFLAWEARAAM 268
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
A ANGD + NDP +S GYG TPMPFLG+TKVEV +G + DVKS+ + KVL
Sbjct: 269 A-ARANGDLNPNDPLRSQSGYGSTPMPFLGETKVEVNL--GDGNE-DVKSKGGDSSLKVL 324
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSS-ATGGLSDDKKSTVED-DKASLQDEYIRAYY 238
PPWMIK+GMNLT+EQRGE++QE+K+DG S LS+DKKS + D+ L+DEY++AYY
Sbjct: 325 PPWMIKEGMNLTEEQRGEMRQEAKVDGGSRGAAKLSEDKKSASGNGDEKDLKDEYLKAYY 384
Query: 239 AALLKKQQELDEAAKNQQESSNTPISD-GLSGASSNRQVGMKSKR----EEVEGDDDVDW 293
LL KQQEL A +NQQES+ SD L SS RQV MK+KR E+ + +D
Sbjct: 385 LELL-KQQEL-AARRNQQESAGESASDIQLGTTSSGRQVSMKAKREEEDEDEDEEDVEWE 442
Query: 294 EEAPVAGTTSESFKVHDLNV 313
E+APVA ++KV DLNV
Sbjct: 443 EKAPVAANG--NYKV-DLNV 459
>gi|18379079|ref|NP_563681.1| transcription initiation factor TFIIE alpha subunit [Arabidopsis
thaliana]
gi|15810381|gb|AAL07078.1| unknown protein [Arabidopsis thaliana]
gi|20465667|gb|AAM20302.1| unknown protein [Arabidopsis thaliana]
gi|39545888|gb|AAR28007.1| TFIIE-alpha 1 [Arabidopsis thaliana]
gi|332189432|gb|AEE27553.1| transcription initiation factor TFIIE alpha subunit [Arabidopsis
thaliana]
Length = 479
Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 189/319 (59%), Positives = 237/319 (74%), Gaps = 15/319 (4%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+K+LKDELE KNTVQEY CPNCQR+YNALDALRL+S+ DDSFHCENCNGELV E +KL
Sbjct: 149 MKKRLKDELEDKNTVQEYGCPNCQRKYNALDALRLISMVDDSFHCENCNGELVVECNKLT 208
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++E DGDDNARRRRRE LK++LQKLEV +KPLM+Q+NRVKDL +PEFG+ +A
Sbjct: 209 SEEVVDGDDNARRRRRENLKNMLQKLEVQMKPLMDQLNRVKDLPIPEFGSF-LAWEARAA 267
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
NGD + NDP +S GYG TPMPFLG+TKVEV +G + DVKS+ + KVL
Sbjct: 268 MAARENGDLNPNDPLRSQGGYGSTPMPFLGETKVEVNL--GDGNE-DVKSKGGDSSLKVL 324
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMD-GSSATGGLSDDKKSTVED-DKASLQDEYIRAYY 238
PPWMIK+GMNLT+EQRGE++QE+K+D G+ A LSDDKKS + + D+ L+DEY++AYY
Sbjct: 325 PPWMIKEGMNLTEEQRGEMRQEAKVDGGAGAAAKLSDDKKSAIGNGDEKDLKDEYLKAYY 384
Query: 239 AALLKKQQELDEAAKNQQESSNTPISDGLSG-ASSNRQVGMKSKR---EEVEGDDDVDWE 294
A L+ KQQEL A +NQQES+ P S SG S RQV MK+KR E+ + ++ E
Sbjct: 385 AELM-KQQEL-AARRNQQESAGEPTSGIQSGTVYSGRQVSMKAKREEDEDEDEEEVEWEE 442
Query: 295 EAPVAGTTSESFKVHDLNV 313
+APV T + ++KV DLNV
Sbjct: 443 KAPV--TANGNYKV-DLNV 458
>gi|148906904|gb|ABR16597.1| unknown [Picea sitchensis]
Length = 480
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 191/314 (60%), Positives = 236/314 (75%), Gaps = 18/314 (5%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+K+LKDELE +NT+QEYICPNC RRY+ALDAL+L+S +DSFHCENCN ELVAESDKLA
Sbjct: 144 MKKRLKDELEDRNTLQEYICPNCNRRYSALDALQLISFTEDSFHCENCNSELVAESDKLA 203
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
A+E GDG+DN RRRRREKLK+LL+K+EV LKPLMEQ+ RVKDL VPEFG+L WEARA A
Sbjct: 204 AEEKGDGEDNGRRRRREKLKELLEKMEVQLKPLMEQLTRVKDLPVPEFGSLLQWEARAIA 263
Query: 121 AGRAANGDSSSNDPNKSS--QGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQK 178
AGRA +GD+++N+ +KSS QG+GGTPMPFLG+TKVEVA SG E K D K + S K
Sbjct: 264 AGRAVSGDTNANESSKSSQGQGFGGTPMPFLGETKVEVALSGMEVKAEDSKEDVASL--K 321
Query: 179 VLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKA----SLQDEYI 234
VLPPWMI+QGMNLT EQRGEVKQE K D S+ G + +KK T +D+K +LQ+EY+
Sbjct: 322 VLPPWMIRQGMNLTNEQRGEVKQELKPDNISSFMGPAVEKKPT-DDEKGNIQQNLQEEYL 380
Query: 235 RAYYAALLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWE 294
+AYYAA+ K+QQE + AA ++ S R+VGMK+KRE E D+ V+WE
Sbjct: 381 KAYYAAIFKQQQEAEAAATAAAAAAA-------EEKPSERRVGMKAKRE--EDDEGVEWE 431
Query: 295 EAPVAGTTSESFKV 308
E G T E ++
Sbjct: 432 EPRTTGATGEGVEI 445
>gi|297804106|ref|XP_002869937.1| transcription initiation factor [Arabidopsis lyrata subsp. lyrata]
gi|297315773|gb|EFH46196.1| transcription initiation factor [Arabidopsis lyrata subsp. lyrata]
Length = 483
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/330 (59%), Positives = 236/330 (71%), Gaps = 33/330 (10%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
++KK KDELE +NTVQEY CPNC+R+YNALDALRL+S+EDDSFHCENCNGELV E +KL
Sbjct: 149 LKKKFKDELEDRNTVQEYGCPNCKRKYNALDALRLISMEDDSFHCENCNGELVMECNKLT 208
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++E DG DNARRR+REK+K LQ LEV LKPLME INRVKDL P F AWE RA+
Sbjct: 209 SEEVVDGGDNARRRQREKVKVWLQDLEVELKPLMELINRVKDLPFPAFEPFPAWEVRAAK 268
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
A R NGD + NDP++S GYG TPMPFLG+TKVEV EGK+ DVKS+ + K+L
Sbjct: 269 AAR-ENGDLNLNDPSRSLGGYGSTPMPFLGETKVEVNL--GEGKE-DVKSKGGDSSLKML 324
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVE--DDKASLQ-------- 230
PPWMIKQGMNLT+EQRGE++QE+ D GLSDDKKS +E DD L+
Sbjct: 325 PPWMIKQGMNLTEEQRGEMRQEANAD------GLSDDKKSVMENGDDNKDLKACFLEKNF 378
Query: 231 ----DEYIRAYYAALLKKQQELDEAAK-NQQESSNTPISDGLSGA--SSNRQVGMKSKRE 283
DEY++AYYAA+L +QQ+L AAK NQQES+ + + A SS+RQVGMKSKRE
Sbjct: 379 ILWIDEYLKAYYAAIL-EQQKL--AAKLNQQESAGESTTTDIESATTSSDRQVGMKSKRE 435
Query: 284 EVEGDDDVDWEEAPVAGTTSESFKVHDLNV 313
E E +D E+A V T + ++KV DLNV
Sbjct: 436 EEEEEDVEWEEQASV--TANGNYKV-DLNV 462
>gi|3850583|gb|AAC72123.1| Contains similarity to transcription initiation factor IIE, alpha
subunit gb|X63468 from Homo sapiens [Arabidopsis
thaliana]
Length = 506
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 190/337 (56%), Positives = 236/337 (70%), Gaps = 33/337 (9%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+K+LKDELE KNTVQEY CPNCQR+YNALDALRL+S+ DDSFHCENCNGELV E +KL
Sbjct: 158 MKKRLKDELEDKNTVQEYGCPNCQRKYNALDALRLISMVDDSFHCENCNGELVVECNKLT 217
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++E DGDDNARRRRRE LK++LQKLEV +KPLM+Q+NRVKDL +PEFG+ A +A
Sbjct: 218 SEEVVDGDDNARRRRRENLKNMLQKLEVQMKPLMDQLNRVKDLPIPEFGSFLA-WEARAA 276
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
NGD + NDP +S GYG TPMPFLG+TKVEV +G + DVKS+ + KVL
Sbjct: 277 MAARENGDLNPNDPLRSQGGYGSTPMPFLGETKVEVNL--GDGNE-DVKSKGGDSSLKVL 333
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMD-GSSATGGLSDDKKSTVED--------------- 224
PPWMIK+GMNLT+EQRGE++QE+K+D G+ A LSDDKKS + +
Sbjct: 334 PPWMIKEGMNLTEEQRGEMRQEAKVDGGAGAAAKLSDDKKSAIGNGDEKDLKACFWGQIL 393
Query: 225 ----DKASLQDEYIRAYYAALLKKQQELDEAAKNQQESSNTPISDGLSG-ASSNRQVGMK 279
D S DEY++AYYA L+ KQQEL A +NQQES+ P S SG S RQV MK
Sbjct: 394 YIYLDSHSSFDEYLKAYYAELM-KQQEL-AARRNQQESAGEPTSGIQSGTVYSGRQVSMK 451
Query: 280 SKR---EEVEGDDDVDWEEAPVAGTTSESFKVHDLNV 313
+KR E+ + ++ E+APV T + ++KV DLNV
Sbjct: 452 AKREEDEDEDEEEVEWEEKAPV--TANGNYKV-DLNV 485
>gi|357145873|ref|XP_003573797.1| PREDICTED: general transcription factor IIE subunit 1-like
[Brachypodium distachyon]
Length = 465
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/325 (53%), Positives = 227/325 (69%), Gaps = 21/325 (6%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+K LKDEL+ +NTVQ YICPNC++RY+A DAL+LVS D+ FHCENCNGELVAESDKLA
Sbjct: 145 MKKTLKDELDSRNTVQHYICPNCKKRYSAFDALQLVSYTDEYFHCENCNGELVAESDKLA 204
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++E GDGDDNAR+RRREKL D+ Q+++ LKPL Q+ RVKDL PEFG+LQ+WE
Sbjct: 205 SEEMGDGDDNARKRRREKLNDMQQRIDEQLKPLQAQLKRVKDLPAPEFGSLQSWE--RLN 262
Query: 121 AGRAANGDSSSNDPNKSSQG-YGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKV 179
G A+GD S+ D ++++QG Y GTPMP+LG+TKVEVA SG+ K+ +S TD T KV
Sbjct: 263 IGAFAHGDPSAADSSRNAQGQYNGTPMPYLGETKVEVALSGSGAKEEGAESGTDGTVMKV 322
Query: 180 LPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYA 239
LPPWM+++GMN+TKEQRGE +K D S D+KK + D+ S+QDEYI+AYY
Sbjct: 323 LPPWMVREGMNITKEQRGETSNTTKGDEKSEG---KDEKKQDSKGDEKSIQDEYIKAYYE 379
Query: 240 ALLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWEEAP-- 297
AL K+Q+E D AK QE +T S+ + + R +G K+KRE D DV+ E
Sbjct: 380 ALKKRQEEED--AKRMQEEGHTLSSE----SHAKRLLGTKTKRE----DGDVEDEGVEWE 429
Query: 298 ---VAGTTSESFKVHDLNVEAEASA 319
+AG T+E++K DLN EA S
Sbjct: 430 EEQLAGNTAETYKFVDLNAEAPESG 454
>gi|326521416|dbj|BAJ96911.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 465
Score = 316 bits (810), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 175/323 (54%), Positives = 227/323 (70%), Gaps = 16/323 (4%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+K LKDEL+ +NTVQ YICPNC++RY+A DAL+L+S D+ FHCENCNGEL+AESDKL+
Sbjct: 144 MKKTLKDELDSRNTVQHYICPNCKKRYSAFDALQLISYTDEYFHCENCNGELLAESDKLS 203
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++E GDGDDNAR+RRREKL D+ Q+++ LKPL Q+ RVKDL PEFG+LQ+WE
Sbjct: 204 SEEMGDGDDNARKRRREKLNDMQQRIDEQLKPLQAQLKRVKDLPAPEFGSLQSWE--RLN 261
Query: 121 AGRAANGDSSSNDPNKSSQG-YGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKV 179
G A+GDS++ + +++QG Y GTPMP+LGDTKV+V +G+ K+ +S D T KV
Sbjct: 262 LGAFAHGDSAAAEAARNAQGQYNGTPMPYLGDTKVDVELAGSGVKEEGAESGRDGTVLKV 321
Query: 180 LPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYA 239
LPPWM+++GMNLTKEQRGE SK D S + D+KK ++D+ S+QDEY++AYY
Sbjct: 322 LPPWMVREGMNLTKEQRGESSNTSKGDEKS---DVKDEKKQDSKEDEKSIQDEYLKAYYE 378
Query: 240 ALLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREE--VEGDDDVDWEEAP 297
A KKQ+E D A + QQE S S RQ+GMK+KRE+ VE DD V+WEE
Sbjct: 379 AFKKKQEEED-AKRMQQEGQAFS-----SEIHSERQLGMKAKREDENVE-DDGVEWEEEQ 431
Query: 298 VAGTTSES-FKVHDLNVEAEASA 319
AG SE +K DLN EA S
Sbjct: 432 PAGNASEEPYKFVDLNAEAPESG 454
>gi|226492010|ref|NP_001140995.1| uncharacterized protein LOC100273074 [Zea mays]
gi|194702088|gb|ACF85128.1| unknown [Zea mays]
Length = 457
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 176/331 (53%), Positives = 230/331 (69%), Gaps = 17/331 (5%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+KKLKDEL+ +NT+Q YICP+C +RY+A DAL+LVS D+ FHCE CNGELVAESDKLA
Sbjct: 143 MKKKLKDELDSRNTIQHYICPSCNKRYSAFDALQLVSYTDEYFHCETCNGELVAESDKLA 202
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++E GDGDDN R+RRREKLKD+ Q++E LKPL+ Q++RVK++ PEFG+LQ WE RA+
Sbjct: 203 SEEMGDGDDNVRKRRREKLKDMQQRIEEQLKPLVAQLDRVKNIPAPEFGSLQTWE-RAN- 260
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
G A GD ++ D +++SQG GTPMP++G+TKVEV K+ +TDS KVL
Sbjct: 261 IGAFAIGDPAAADSSRNSQGQYGTPMPYIGETKVEVDLLSDGVKEGAESGKTDSE-LKVL 319
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYAA 240
PPWMIK GMNLTKEQRGE+ K++ S A D K D S+Q+EYI+AYY A
Sbjct: 320 PPWMIKDGMNLTKEQRGEIIAPQKLEKSDAK-----DDKKHDLKDDHSVQEEYIKAYYEA 374
Query: 241 LLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDD-VDWEEAPVA 299
L KKQ+E +EA + Q+ + D + RQVG K KR +GDD+ ++WEE
Sbjct: 375 LRKKQEE-EEAKRRMQQEGKVFLPD----FQTERQVGKKYKR---DGDDEGIEWEEHQPT 426
Query: 300 GTTSESFKVHDLNVEAEASAEDEDDIDWEEG 330
G +E++K+ DLN EA+ S +DEDD WEEG
Sbjct: 427 GYATETYKLADLNAEAQESGDDEDDNVWEEG 457
>gi|226496876|ref|NP_001141491.1| uncharacterized protein LOC100273603 [Zea mays]
gi|194704782|gb|ACF86475.1| unknown [Zea mays]
gi|195625466|gb|ACG34563.1| RNA polymerase II transcription factor/ transcription initiation
factor [Zea mays]
gi|223947847|gb|ACN28007.1| unknown [Zea mays]
gi|413934289|gb|AFW68840.1| RNA polymerase II transcription factor/ transcription initiation
factor [Zea mays]
Length = 460
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/331 (51%), Positives = 227/331 (68%), Gaps = 14/331 (4%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+KKLKDEL+ +NT+Q YICP+C +RY+A DAL+LVS D+ FHCE CNGELVAE DKLA
Sbjct: 143 MKKKLKDELDSRNTIQHYICPSCNKRYSAFDALQLVSYTDEYFHCETCNGELVAEDDKLA 202
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++E GDGDDN R+RRREKLKD+ Q++E LKPL+ Q++RVK+L PEFG+LQ WE +
Sbjct: 203 SEEMGDGDDNVRKRRREKLKDMQQRIEEQLKPLVAQLDRVKNLPAPEFGSLQTWE--RAH 260
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
G A GD ++ D +++SQG GTPMP+LG TKVEV ++G++ +S D + KV+
Sbjct: 261 IGAFAIGDPAAADSSRNSQGQYGTPMPYLGQTKVEVDIL-SDGEKEGAESGKDGSELKVI 319
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYAA 240
PPWMIK GMNLTKEQRGE + K++ S A D K D S+Q+EYI+AYY A
Sbjct: 320 PPWMIKDGMNLTKEQRGEKIESQKLEKSEAK-----DDKKQDLKDDQSVQEEYIKAYYEA 374
Query: 241 LLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWEEAPV-A 299
L KKQ+E +EA Q+ + D + + RQVG K KR++ + +D E P A
Sbjct: 375 LRKKQEE-EEAKNRMQQEGKISVPD----SQTERQVGKKYKRDDDDDEDIEWEEHQPTAA 429
Query: 300 GTTSESFKVHDLNVEAEASAEDEDDIDWEEG 330
G +E++K+ DLN EA+ S +DEDD WEEG
Sbjct: 430 GNATETYKLADLNAEAQESGDDEDDNVWEEG 460
>gi|242034597|ref|XP_002464693.1| hypothetical protein SORBIDRAFT_01g023530 [Sorghum bicolor]
gi|241918547|gb|EER91691.1| hypothetical protein SORBIDRAFT_01g023530 [Sorghum bicolor]
Length = 458
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 167/318 (52%), Positives = 222/318 (69%), Gaps = 16/318 (5%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+KKLKDEL+ +NT+Q YICP+C +RY+A DAL+LVS D+ FHCE CNGELVAESDKLA
Sbjct: 145 MKKKLKDELDSRNTIQHYICPSCNKRYSAFDALQLVSYTDEYFHCETCNGELVAESDKLA 204
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++E GDGDDN R+RRREKLKD+ Q++E LKPL+ Q++RVK+L PEFG+LQ WE RA+
Sbjct: 205 SEEMGDGDDNVRKRRREKLKDMQQRIEEQLKPLVAQLDRVKNLPAPEFGSLQTWE-RAN- 262
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
G A GD ++ D +++SQG GTPMPF+G+TKVEV G K+ +S + + KVL
Sbjct: 263 IGAFAIGDPAAADSSRNSQGQYGTPMPFIGETKVEVVIDGV--KEEGAESGKNGSELKVL 320
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYAA 240
PPWMIK GMNLTKEQRGE + K++ S A D K D S+Q+EYI+AYY A
Sbjct: 321 PPWMIKDGMNLTKEQRGEKIEPQKLEISEAK-----DDKKQDSKDDQSVQEEYIKAYYEA 375
Query: 241 LLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWEEAPVAG 300
L KKQ+E +EA + Q+ + D + + RQVG K KR+ + D+ ++WEE G
Sbjct: 376 LRKKQEE-EEAKRRMQQEGKISVPD----SQTERQVGKKYKRD--DDDEGIEWEEHQPTG 428
Query: 301 TTSESFKVHDLNVEAEAS 318
+E++K+ DLN EA+ S
Sbjct: 429 NATETYKLADLNAEAQES 446
>gi|145340451|ref|NP_193767.2| Transcription factor TFIIE, alpha subunit [Arabidopsis thaliana]
gi|332658910|gb|AEE84310.1| Transcription factor TFIIE, alpha subunit [Arabidopsis thaliana]
Length = 475
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/287 (58%), Positives = 209/287 (72%), Gaps = 14/287 (4%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
++KK KDELE +NTVQEY CPNC+R+YNALDALRL+S+EDDSFHCENCNGELV E +KL
Sbjct: 149 LKKKFKDELEDRNTVQEYGCPNCKRKYNALDALRLISMEDDSFHCENCNGELVMECNKLI 208
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++E D DNARRR+REK+K LQ LE LKPLME INRVKDL P F A +A
Sbjct: 209 SEEVVDRGDNARRRQREKVKVWLQDLEGELKPLMELINRVKDLPFPAFEPFPA-WEARAA 267
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
NGD + +DP++S GYG TPMPFLG+TKVEV EG + DV S + K+L
Sbjct: 268 KAARENGDFNPDDPSRSLGGYGSTPMPFLGETKVEVNL--GEGNE-DVTSTGGDSSLKML 324
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVE--DDKASLQDEYIRAYY 238
PPWMIKQGM LT+EQRGE++QE+ +DG +A LSDDKKS +E DD L+DEY++AYY
Sbjct: 325 PPWMIKQGMKLTEEQRGEMRQEANVDGEAAK--LSDDKKSVMENGDDNKDLKDEYLKAYY 382
Query: 239 AALLKKQQELDEAAK-NQQESSNTPISDGLSGAS--SNRQVGMKSKR 282
AA++ +QQ+L AAK N+QES+ + + A+ S+RQVGMKSKR
Sbjct: 383 AAIM-EQQKL--AAKLNEQESAGESTTTDIESATTYSDRQVGMKSKR 426
>gi|15233409|ref|NP_193813.1| transcription initiation factor IIE (TFIIE) alpha subunit protein
[Arabidopsis thaliana]
gi|5262221|emb|CAB45847.1| putative protein [Arabidopsis thaliana]
gi|7268877|emb|CAB79081.1| putative protein [Arabidopsis thaliana]
gi|332658963|gb|AEE84363.1| transcription initiation factor IIE (TFIIE) alpha subunit protein
[Arabidopsis thaliana]
Length = 416
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/333 (49%), Positives = 215/333 (64%), Gaps = 42/333 (12%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+K+ KD LE K+ VQEY CPNC+R+ FHCENCNGELV E +KL
Sbjct: 121 MKKEFKDVLEDKDNVQEYGCPNCKRKI--------------FFHCENCNGELVMECNKLT 166
Query: 61 AQE-GGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARAS 119
++E DG DN R RR+ LKDLLQ +EV LKPLM+ INR+KDL VP F + AWE R +
Sbjct: 167 SEEVVVDGSDNP-RSRRDHLKDLLQNMEVRLKPLMDHINRIKDLPVPSFESFPAWETRVA 225
Query: 120 AAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKV 179
A R NGD + +D + GYG TPMPFLG+T++EV G E + V DS+ +K+
Sbjct: 226 KAAR-ENGDLNPDDTLRPQGGYGSTPMPFLGETEIEVNL-GEENEDVKSDEVGDSSRRKL 283
Query: 180 LPPWMIKQGMNLTKEQRGEVKQESKMD--GSSATGGLSDDKKSTVEDDKASLQDEYIRAY 237
P W+IK+GMNL+ EQRGE++ E+K D GSS G DD +L+DEY++AY
Sbjct: 284 TPSWLIKKGMNLSDEQRGEIRHEAKADDGGSSMENG----------DDDRNLKDEYLKAY 333
Query: 238 YAALLKKQQELDEAAKNQQESSNTPISD-GLSGASSNRQVGMKSKREEVEGDDDVDWEEA 296
YAA+L ++QEL E NQQES+ +D L+ +SS+RQVGMKSKREE E EEA
Sbjct: 334 YAAIL-EEQELAEKL-NQQESAGKVTTDIELATSSSDRQVGMKSKREEEEE------EEA 385
Query: 297 PVAGTTSESFKVHDLNVEAEASAEDEDDIDWEE 329
VA ++KV DLNVEAE + +DE+D+DW+E
Sbjct: 386 SVAANG--NYKV-DLNVEAEEAEQDENDVDWQE 415
>gi|357518241|ref|XP_003629409.1| General transcription factor IIE subunit [Medicago truncatula]
gi|355523431|gb|AET03885.1| General transcription factor IIE subunit [Medicago truncatula]
Length = 544
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/245 (63%), Positives = 187/245 (76%), Gaps = 19/245 (7%)
Query: 91 KPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLG 150
KPL++QI RVKDL VPEFG+LQAWEARASAAGRAANGD++ + S+ GY G P+P+ G
Sbjct: 314 KPLIDQIGRVKDLPVPEFGSLQAWEARASAAGRAANGDNAGD----SNMGYNGAPLPYSG 369
Query: 151 DTKVEVAFSGAEGKQVDVKSETDSTPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSA 210
DTKV V F+G EGK VKSETDST KVLPPWMI GMNLTKEQRGEVKQE+K DG+S
Sbjct: 370 DTKVVVDFNGTEGKGDGVKSETDSTSLKVLPPWMITSGMNLTKEQRGEVKQETKTDGTST 429
Query: 211 TGG--LSDDKKSTVEDDKASLQDEYIRAYYAALLKKQQELDEAAKNQQE--SSNTPISDG 266
+ +D+KKST+ D+ ++QDEYI+AYYAALLKKQ EL+EAAK Q+ +++ P S
Sbjct: 430 STAAQYTDEKKSTIGHDEKNIQDEYIKAYYAALLKKQHELEEAAKIPQDMNTADDPFS-- 487
Query: 267 LSGASSNRQVGMKSKREEVEGDDDVDWEEAPVAGTTSESFKVHDLNVEAEASAED-EDDI 325
++SNRQ GMKSKR E DD +WEEAPV G + +KV DLNVEA+A AED EDD+
Sbjct: 488 ---STSNRQAGMKSKRG--EDDDGTEWEEAPVRG--NGGYKV-DLNVEADAPAEDNEDDV 539
Query: 326 DWEEG 330
DWEEG
Sbjct: 540 DWEEG 544
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 98/162 (60%), Gaps = 33/162 (20%)
Query: 1 MRKKLKDELECKNTVQEYICPN---------C--------QRRYNALDALRLVSLEDDSF 43
M+ KLKDELE KNTVQEYIC N C YNALDALRL+S ED+ F
Sbjct: 138 MKHKLKDELENKNTVQEYICTNYILFVWMYFCFIILGNFNYFIYNALDALRLISFEDEDF 197
Query: 44 HCENCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINR---- 99
HCE+CNG+L ESDKLAAQEG DGD+NARRRRREKLKD+LQK+E L+EQ+ R
Sbjct: 198 HCEHCNGKLEVESDKLAAQEGEDGDENARRRRREKLKDMLQKMEALY--LVEQVMRDLGT 255
Query: 100 -------VKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDP 134
+ ++VP F Q R S+ + S++DP
Sbjct: 256 SQKPYEFITQIEVPGF---QLNILRTSSGNCFLGDNCSTSDP 294
>gi|414868387|tpg|DAA46944.1| TPA: hypothetical protein ZEAMMB73_735721 [Zea mays]
Length = 343
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 160/210 (76%), Gaps = 3/210 (1%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+KKLKDEL+ +NT+Q YICP+C +RY+A DAL+LVS D+ FHCE CNGELVAESDKLA
Sbjct: 118 MKKKLKDELDSRNTIQHYICPSCNKRYSAFDALQLVSYTDEYFHCETCNGELVAESDKLA 177
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++E GDGDDN R+RRREKLKD+ Q++E LKPL+ Q++RVK++ PEFG+LQ WE RA+
Sbjct: 178 SEEMGDGDDNVRKRRREKLKDMQQRIEEQLKPLVAQLDRVKNIPAPEFGSLQTWE-RAN- 235
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
G A GD ++ D +++SQG GTPMP++G+TKVEV K+ +TDS KVL
Sbjct: 236 IGAFAIGDPAAADSSRNSQGQYGTPMPYIGETKVEVDLLSDGVKEGAESGKTDSE-LKVL 294
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSA 210
PPWMIK GMNLTKEQRGE+ K++ S A
Sbjct: 295 PPWMIKDGMNLTKEQRGEIIAPQKLEKSDA 324
>gi|302798575|ref|XP_002981047.1| hypothetical protein SELMODRAFT_114128 [Selaginella moellendorffii]
gi|300151101|gb|EFJ17748.1| hypothetical protein SELMODRAFT_114128 [Selaginella moellendorffii]
Length = 472
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 153/328 (46%), Positives = 211/328 (64%), Gaps = 49/328 (14%)
Query: 2 RKKLKDELECKNTVQEYICPN--CQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKL 59
+K +KDELE KNTVQEY+CP+ C RRY+ALDA RL+S D +FHCE C+ ELVA +DKL
Sbjct: 157 KKMIKDELEDKNTVQEYVCPDSGCGRRYSALDASRLISPVDMNFHCERCDAELVANNDKL 216
Query: 60 AAQEGGDGDD--NARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEAR 117
A ++ G+G++ NARRR+REKLK++L+++EV LKPL +Q+ ++KDL P++G+ W+ R
Sbjct: 217 APKDLGEGNNEENARRRQREKLKEMLERMEVQLKPLTDQLAKLKDLTPPDYGSFSQWQER 276
Query: 118 ASAAGRA-ANGDSSSNDPNKSSQGYGGTPMPFLGDTK--VEVAFSGAEGKQVDVKSETDS 174
A R +GD + + + S PMPFLG+TK VEVAF+G++ K+ VK +
Sbjct: 277 TLAQARGDGDGDHKTANGERPS-----VPMPFLGETKARVEVAFAGSDTKEA-VKEDPGK 330
Query: 175 TPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVE---DDKA---- 227
+ KVLPPWMI+QGM+LT +QRGEVK E G S D K TV D+K
Sbjct: 331 S-MKVLPPWMIRQGMSLTAQQRGEVKTEE---------GASSDTKPTVAPTMDEKPMSAE 380
Query: 228 -SLQDEYIRAYYAALLKKQQE----------LDEAAKNQQESSNTPISDGLSGASSNRQV 276
LQ+EY++AYYAAL+ +QQ+ LDE K + + N G + + +R V
Sbjct: 381 RQLQEEYVKAYYAALMLQQQQQQQQQPPGDALDEVKKEEPDQEN-----GFAAIAGDRVV 435
Query: 277 GMKSKREEVEGDDDVDW-EEAPVAGTTS 303
G+KSKR++ E DDV+W EEAP G S
Sbjct: 436 GVKSKRDDAE--DDVEWEEEAPSTGLRS 461
>gi|302801534|ref|XP_002982523.1| hypothetical protein SELMODRAFT_116887 [Selaginella moellendorffii]
gi|300149622|gb|EFJ16276.1| hypothetical protein SELMODRAFT_116887 [Selaginella moellendorffii]
Length = 457
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/324 (45%), Positives = 208/324 (64%), Gaps = 39/324 (12%)
Query: 2 RKKLKDELECKNTVQEYICPN--CQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKL 59
+K +KDELE KNTVQEY+CP+ C RRY+ALDA RL+S D +FHCE C+ ELVA +DKL
Sbjct: 140 KKMIKDELEDKNTVQEYVCPDSGCGRRYSALDASRLISPVDMNFHCERCDAELVANNDKL 199
Query: 60 AAQEGGDGDD--NARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEAR 117
A ++ G+G++ NARRR+REKLK++L+++EV LKPL +Q+ ++KDL P++G+ W+ R
Sbjct: 200 APKDLGEGNNEENARRRQREKLKEMLERMEVQLKPLTDQLAKLKDLTPPDYGSFSQWQER 259
Query: 118 ASAAGRA-ANGDSSSNDPNKSSQGYGGTPMPFLGDTK--VEVAFSGAEGKQVDVKSETDS 174
A R +GD + + + S PMPFLG+TK VEVAF+G++ K+ VK +
Sbjct: 260 TLAQARGDGDGDHKTANGERPS-----VPMPFLGETKARVEVAFAGSDTKEA-VKEDPGK 313
Query: 175 TPQKVLPPWMIKQGMNLTKEQRGEVKQE--SKMDGSSATGGLSDDKKSTVEDDKASLQDE 232
+ KVLPPWMI+QGM+LT +QRGEVK E + D D+K + E LQ+E
Sbjct: 314 S-MKVLPPWMIRQGMSLTAQQRGEVKTEEGASSDTKPTVAATMDEKPMSAE---RQLQEE 369
Query: 233 YIRAYYAALLKKQQE------------LDEAAKNQQESSNTPISDGLSGASSNRQVGMKS 280
Y++AYYAAL+ +QQ+ LDE K + + N G + + +R VG KS
Sbjct: 370 YVKAYYAALMLQQQQQQQQQQQPPGDALDEVKKEEPDQEN-----GFAAIAGDRVVGAKS 424
Query: 281 KREEVEGDDDVDW-EEAPVAGTTS 303
KR++ E DDV+W EEAP G S
Sbjct: 425 KRDDAE--DDVEWEEEAPSTGLRS 446
>gi|5738379|emb|CAB52822.1| putative protein [Arabidopsis thaliana]
gi|7268829|emb|CAB79034.1| putative protein [Arabidopsis thaliana]
Length = 527
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 204/350 (58%), Gaps = 88/350 (25%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
++KK KDELE +NTVQEY CPNC+R+YNALDALRL+S+EDDSFHCENCNGELV E +KL
Sbjct: 149 LKKKFKDELEDRNTVQEYGCPNCKRKYNALDALRLISMEDDSFHCENCNGELVMECNKLI 208
Query: 61 AQEGGDGDDNARRRRREK----LKDL--------------LQKLEVHLKPLMEQINR--- 99
++E D DNARRR+REK L+DL ++K ++ L P ++ ++R
Sbjct: 209 SEEVVDRGDNARRRQREKVKVWLQDLEVCVYCFSGYFNESMRKTQIDL-PSLKLVHRSKF 267
Query: 100 --------------------------------------------VKDLDVPEFGTLQAWE 115
VKDL P F A
Sbjct: 268 MMKSERYMIKFPRRFILKYPMLEICKTKQDCGCSVCVDTIGNKIVKDLPFPAFEPFPA-W 326
Query: 116 ARASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDST 175
+A NGD + +DP++S GYG TPMPFLG+TKVEV EG + DV S +
Sbjct: 327 EARAAKAARENGDFNPDDPSRSLGGYGSTPMPFLGETKVEVNL--GEGNE-DVTSTGGDS 383
Query: 176 PQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIR 235
K+LPPWMIKQGM LT+EQRGE++QE+ +DG +A LSDDKKS DEY++
Sbjct: 384 SLKMLPPWMIKQGMKLTEEQRGEMRQEANVDGEAAK--LSDDKKS----------DEYLK 431
Query: 236 AYYAALLKKQQELDEAAK-NQQESSNTPISDGLSGAS--SNRQVGMKSKR 282
AYYAA++ +QQ+L AAK N+QES+ + + A+ S+RQVGMKSKR
Sbjct: 432 AYYAAIM-EQQKL--AAKLNEQESAGESTTTDIESATTYSDRQVGMKSKR 478
>gi|218186395|gb|EEC68822.1| hypothetical protein OsI_37389 [Oryza sativa Indica Group]
Length = 458
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/338 (45%), Positives = 210/338 (62%), Gaps = 21/338 (6%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRKKLKDEL+ ++TVQ Y CPNC+RRY+A DAL+LVS DD FHCE+C +L+ ES+KL
Sbjct: 134 MRKKLKDELDDRDTVQHYACPNCKRRYSAFDALQLVSDMDDYFHCEHCKEQLLPESEKLT 193
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
E G DNA + + +KLKD+ Q++E LKPL+ ++RVKDL P F +LQ WE RA+
Sbjct: 194 LDEVVCGGDNAIKHKHDKLKDMQQRMEEQLKPLIAVLDRVKDLPFPSFMSLQDWE-RATM 252
Query: 121 AGRAANGDSSSNDPNKSSQG-YGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDST-PQK 178
+ANG S +++S+G Y PMPFLG+T+VEV F G+ G Q V+S +S PQ
Sbjct: 253 EA-SANGAVGS---SQNSEGRYSSKPMPFLGETEVEVNFLGSTGAQEGVESGMESIKPQ- 307
Query: 179 VLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYY 238
P WM ++ LT E +GE+ + +D SS SD K+ + ED+ S+ + Y +AYY
Sbjct: 308 --PSWMNRKSTVLTGEHKGEISNTADLDQSSEAK--SDKKQLSEEDEMKSILEAYAKAYY 363
Query: 239 AALLKKQQELDEAAKNQQESSNTPISD--GLSGASSNRQVGMKSKREEVEGDDDVDWE-- 294
A+ K+Q+ DE K QE S T ISD S A R++G KSKR++ D E
Sbjct: 364 EAIQKRQE--DEDKKMIQEESLTCISDQPFASDAQFERRLGAKSKRDDGGDSGDDGIEMK 421
Query: 295 -EAPVAGTTSESFKVHDLNVEA-EASAEDEDDIDWEEG 330
E P G E +K+ DL+VE E+ +D+DD+ W EG
Sbjct: 422 VEQP-TGNIGEVYKLADLDVETQESIDDDDDDLVWVEG 458
>gi|297799980|ref|XP_002867874.1| hypothetical protein ARALYDRAFT_914602 [Arabidopsis lyrata subsp.
lyrata]
gi|297313710|gb|EFH44133.1| hypothetical protein ARALYDRAFT_914602 [Arabidopsis lyrata subsp.
lyrata]
Length = 273
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 151/327 (46%), Positives = 194/327 (59%), Gaps = 64/327 (19%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+KK K ELE K+ VQEY PNC+R+Y+ALDALRL S+E DSFHCENCNGELV E +KL
Sbjct: 1 MKKKFKHELEDKDNVQEYGRPNCKRKYSALDALRLFSMEGDSFHCENCNGELVMECNKLT 60
Query: 61 AQEG-GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARAS 119
+QE DG DNA RRRR+ LKDLLQ +EV LKPLM+ INR+KDL +P F + AWEARA+
Sbjct: 61 SQEVLVDGSDNA-RRRRDHLKDLLQIMEVRLKPLMDHINRIKDLPLPSFESFPAWEARAA 119
Query: 120 AAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKV 179
R NGD +S+D
Sbjct: 120 TYAR-ENGDRNSDD---------------------------------------------- 132
Query: 180 LPPWMIKQGMNLTKEQRGEVKQESKM--DGSSATGGLSDDKKSTVED--DKASLQDEYIR 235
+IK+GMNLT EQRGE++ +++ G LSDDKKS++ + D L++EYI+
Sbjct: 133 ----LIKKGMNLTDEQRGEIRHGAEVYDGGLGEAAELSDDKKSSLGNGVDDKDLKNEYIK 188
Query: 236 AYYAALLKKQQELDEAAKNQQESS--NTPISDGLSGASSNRQVGMKSKREEVEGDDDVDW 293
Y AA L +Q EL E NQQES+ +T L+ SS+ QVGMK KREE E ++DV W
Sbjct: 189 GYLAAKL-EQHELAEKL-NQQESAGQSTTTDIELATTSSDLQVGMKCKREE-EDEEDVAW 245
Query: 294 EEAPVAGTTSESFKVHDLNVEAEASAE 320
E + + ++KV D+NVEAE + E
Sbjct: 246 GET-FNVSANGNYKV-DMNVEAEKAEE 270
>gi|168019780|ref|XP_001762422.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686500|gb|EDQ72889.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 212/353 (60%), Gaps = 41/353 (11%)
Query: 2 RKKLKDELECKNTVQEYICPN--CQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKL 59
RKK+KDELE +N +QEY+CPN C RRY+ALDA RL++ + FHCENC+ ELV E+DK
Sbjct: 146 RKKIKDELEDRNAIQEYVCPNAGCGRRYSALDATRLINQLTELFHCENCDAELVEEADKF 205
Query: 60 AAQEG-GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
A GDG+DNARRRRREKL++LL+KL+ L+PL Q+ RVK L P+FGTL WE RA
Sbjct: 206 AVPAPEGDGEDNARRRRREKLRELLEKLDKQLQPLHIQLERVKALVPPDFGTLVQWEKRA 265
Query: 119 SAAGRAANGDSSSNDPNKSSQGYG--GTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTP 176
++ RA G S+ D K++ G G G PMP++G+TKV+V +GA + + K ET + P
Sbjct: 266 ISSVRA--GGESNEDAAKAAHGQGSTGPPMPYMGETKVDVVMAGA--AKNEGKDETAAGP 321
Query: 177 QKVLPPWMIKQGMNLTKEQRGEVKQESKMDG--SSATGGLSDDKKSTVEDDKAS----LQ 230
KVLPPWMI++GMNL +QRGE ++G + GG S+ E+DK + LQ
Sbjct: 322 TKVLPPWMIREGMNLNAKQRGEA-----LEGEWNEDNGGTSNADIKPAEEDKEAMQKKLQ 376
Query: 231 DEYIRAYYAALLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSK----REEVE 286
+EY+RAYYAA+L QQ + K++ + D + A++ G+ K ++
Sbjct: 377 EEYVRAYYAAILASQQNASQPPKSENNEMSYVEKDVSTEAAAEVSAGVVVKDEGEDDDDV 436
Query: 287 GDDDVDWEEAPVAGTTSESFKVHDLNVEAEASAE-----------DEDDIDWE 328
+D E P+AG+ HD N+E A DEDDI+WE
Sbjct: 437 EWEDAPAAEVPIAGSG------HDENLEDTEGAPVEGQGDYAGEADEDDIEWE 483
>gi|222615486|gb|EEE51618.1| hypothetical protein OsJ_32891 [Oryza sativa Japonica Group]
Length = 441
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 151/365 (41%), Positives = 204/365 (55%), Gaps = 50/365 (13%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRKKLKD L+ ++TVQ Y+CPNC+RRY+A DAL+LVS DD FHCE+C GEL ES+KL
Sbjct: 92 MRKKLKDGLDDRDTVQHYVCPNCKRRYSAFDALQLVSDMDDYFHCEHCKGELRPESEKLT 151
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
E G NA + +KLKD+ Q++E LKPL+ ++RVKDL P F +LQ WE RA+
Sbjct: 152 LDEIVCGGGNAIKHTHDKLKDMQQRMEEQLKPLIAVLDRVKDLPFPSFMSLQDWE-RAT- 209
Query: 121 AGRAANGDSSSNDPNKSSQG-YGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDST-PQK 178
G +ANG S +++S+G Y PMPFLG+T+VEV F G+ G Q V+S +S PQ
Sbjct: 210 IGASANGAVGS---SQNSEGRYSSKPMPFLGETEVEVNFLGSTGAQEGVESGMESIKPQH 266
Query: 179 VLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYY 238
WM ++ L E + E + +D SS SD K+ + ED+ S+Q+ Y +AYY
Sbjct: 267 ---SWMNRKRTVLAGEHKEENNNTANLDQSSEAK--SDKKQLSEEDEMKSIQEAYAKAYY 321
Query: 239 AALLKKQQELDEAAKNQQESSNTPISD--GLSGASSNRQVGMKSKREE------------ 284
A+ K+Q+ DE + QE S ISD S A R++G KSKR++
Sbjct: 322 EAIQKRQE--DEGKRAIQEESLACISDQPFASDAQFERRLGAKSKRDDGGESGDDGIELK 379
Query: 285 ------------------VEGDDDVDWEEAPVAGTTSESFKVHDLNVEA-EASAEDEDDI 325
VE + VD+ G E +K DLNVE E S +D
Sbjct: 380 VRQSTGNIEEVYKFADLNVETQECVDFGSNVSVGNIEEVYKFADLNVETQEVSC---NDY 436
Query: 326 DWEEG 330
+WEEG
Sbjct: 437 EWEEG 441
>gi|218185202|gb|EEC67629.1| hypothetical protein OsI_35019 [Oryza sativa Indica Group]
Length = 387
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 195/326 (59%), Gaps = 18/326 (5%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRKKLKD L+ ++TVQ Y+CPNC+RRY+A DAL+LVS DD FHCE+C GEL ES+KL
Sbjct: 66 MRKKLKDGLDDRDTVQHYVCPNCKRRYSAFDALQLVSDMDDYFHCEHCKGELRPESEKLT 125
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
E G NA + +KLKD+ Q++E LKPL+ ++RVKDL P F +LQ WE RA+
Sbjct: 126 LDEIVCGGGNAIKHTHDKLKDMHQRMEEQLKPLIAVLDRVKDLPFPSFMSLQDWE-RATI 184
Query: 121 AGRAANGDSSSNDPNKSSQG-YGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDST-PQK 178
+ANG S +++S+G Y PMPFLG+T+VEV F G+ G Q V+S +S PQ
Sbjct: 185 EA-SANGAVGS---SQNSEGRYSSKPMPFLGETEVEVNFLGSTGAQEGVESGMESIKPQ- 239
Query: 179 VLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYY 238
P WM ++ L E + E + +D SS SD K+ + ED+ S+Q+ Y +AYY
Sbjct: 240 --PSWMNRKRTVLAGEHKEENNNTANLDQSSEAK--SDKKQLSEEDEMKSIQEAYAKAYY 295
Query: 239 AALLKKQQELDEAAKNQQESSNTPISD--GLSGASSNRQVGMKSKR--EEVEGDDDVDWE 294
A+ K+Q+ DE + QE S ISD S A R++G KSKR GDD ++ +
Sbjct: 296 EAIQKRQE--DEGKRAIQEESLACISDQPFASDAQFERRLGAKSKRDDGGESGDDGIELK 353
Query: 295 EAPVAGTTSESFKVHDLNVEAEASAE 320
G E +K DLNVE + E
Sbjct: 354 VRQPTGNIEEVYKFADLNVETQELVE 379
>gi|77548560|gb|ABA91357.1| transcription initiation factor IIE, putative [Oryza sativa
Japonica Group]
Length = 334
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 195/326 (59%), Gaps = 18/326 (5%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRKKLKD L+ ++TVQ Y+CPNC+RRY+A DAL+LVS DD FHCE+C GEL ES+KL
Sbjct: 13 MRKKLKDGLDDRDTVQHYVCPNCKRRYSAFDALQLVSDMDDYFHCEHCKGELRPESEKLT 72
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
E G NA + +KLKD+ Q++E LKPL+ ++RVKDL P F +LQ WE RA+
Sbjct: 73 LDEIVCGGGNAIKHTHDKLKDMQQRMEEQLKPLIAVLDRVKDLPFPSFMSLQDWE-RAT- 130
Query: 121 AGRAANGDSSSNDPNKSSQG-YGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDST-PQK 178
G +ANG S +++S+G Y PMPFLG+T+VEV F G+ G Q V+S +S PQ
Sbjct: 131 IGASANGAVGS---SQNSEGRYSSKPMPFLGETEVEVNFLGSTGAQEGVESGMESIKPQH 187
Query: 179 VLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYY 238
WM ++ L E + E + +D SS SD K+ + ED+ S+Q+ Y +AYY
Sbjct: 188 ---SWMNRKRTVLAGEHKEENNNTANLDQSSEAK--SDKKQLSEEDEMKSIQEAYAKAYY 242
Query: 239 AALLKKQQELDEAAKNQQESSNTPISD--GLSGASSNRQVGMKSKR--EEVEGDDDVDWE 294
A+ K+Q+ DE + QE S ISD S A R++G KSKR GDD ++ +
Sbjct: 243 EAIQKRQE--DEGKRAIQEESLACISDQPFASDAQFERRLGAKSKRDDGGESGDDGIELK 300
Query: 295 EAPVAGTTSESFKVHDLNVEAEASAE 320
G E +K DLNVE + E
Sbjct: 301 VRQSTGNIEEVYKFADLNVETQELVE 326
>gi|147788360|emb|CAN74369.1| hypothetical protein VITISV_037867 [Vitis vinifera]
Length = 896
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 138/242 (57%), Positives = 167/242 (69%), Gaps = 44/242 (18%)
Query: 79 LKDLLQKLE-VHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPNKS 137
++ LL++L+ V LKPLM+Q++RVKDL VPEFG+LQAWEARA+AAGR A +
Sbjct: 687 IRRLLEELKMVQLKPLMDQLSRVKDLPVPEFGSLQAWEARANAAGRXA-----------N 735
Query: 138 SQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVLPPWMIKQGMNLTKEQRG 197
G+GGTPMPF+G+TKVEVAFSG K+ D KSE + KVLPPWMIK+GMNLTKEQRG
Sbjct: 736 GLGFGGTPMPFVGETKVEVAFSGVGVKEEDSKSEIANASLKVLPPWMIKEGMNLTKEQRG 795
Query: 198 EVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYAALLKKQQELDEAAKNQQE 257
E DEY++AYYAA+LK+QQE +EAAK Q E
Sbjct: 796 E--------------------------------DEYVKAYYAAILKRQQEQEEAAKKQLE 823
Query: 258 SSNTPISDGLSGASSNRQVGMKSKREEVEGDDDVDWEEAPVAGTTSESFKVHDLNVEAEA 317
SN IS+ + G SSNRQVGMKSKR+E EGDDD +WEEAP AG SESFKV+DLNV+A+A
Sbjct: 824 LSNAHISNSVLGTSSNRQVGMKSKRDEDEGDDDFEWEEAPTAGNRSESFKVNDLNVQADA 883
Query: 318 SA 319
S
Sbjct: 884 SG 885
>gi|346703344|emb|CBX25441.1| hypothetical_protein [Oryza glaberrima]
Length = 315
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 202/342 (59%), Gaps = 39/342 (11%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRKKLKDEL+ ++TVQ Y+CPNC+RRY+A DAL+LVS+ DD FHCE+C GEL+ ES+KL
Sbjct: 1 MRKKLKDELDDRDTVQHYVCPNCKRRYSAFDALQLVSVMDDYFHCEHCKGELLPESEKLT 60
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
E G DNA + + +KLKD+ Q++E LKPL+ ++RVKDL P F +LQ WE RA+
Sbjct: 61 LDEIVCGGDNAIKHKHDKLKDMQQRMEEQLKPLIAVLDRVKDLPFPSFMSLQDWE-RATM 119
Query: 121 AGRAANGDSSSNDPNKSSQG-YGGTPMPFLGDTK---VEVAFSGAEGKQVDVKSETDST- 175
+ANG S +++S+G Y PMPFLG+T+ VEV F G+ G Q V+S +S
Sbjct: 120 EA-SANGAVGS---SQNSEGRYSSKPMPFLGETEVSLVEVNFLGSTGAQEGVESGMESIK 175
Query: 176 PQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIR 235
PQ P WM ++ LT E +GE+ + +D SS SD K+ + ED+ S+Q E
Sbjct: 176 PQ---PSWMNRKSTVLTGEHKGEISNTADLDQSSEAK--SDKKQLSEEDEMKSIQQE--- 227
Query: 236 AYYAALLKKQQELDEAAKNQQESSNTPISD--GLSGASSNRQVGMKSKREEVEGDDDVDW 293
DE + QE T ISD S A R++G KSKR++ D
Sbjct: 228 -------------DEDKRMIQEERLTCISDQPFASDAQFERRLGAKSKRDDGGDSGDDGI 274
Query: 294 E---EAPVAGTTSESFKVHDLNVEAEASA--EDEDDIDWEEG 330
E E P G E +K+ DL+VE + S +D+DD+ W EG
Sbjct: 275 EMKVEQP-TGNIGEVYKLADLDVETQESIDDDDDDDLVWVEG 315
>gi|255587096|ref|XP_002534134.1| transcription initiation factor iie, alpha subunit, putative
[Ricinus communis]
gi|223525806|gb|EEF28251.1| transcription initiation factor iie, alpha subunit, putative
[Ricinus communis]
Length = 300
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/115 (83%), Positives = 106/115 (92%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
+RKKLKDELE KNT+QEYICPNC RRYNALDAL+L+ +D+ FHCENCNGELV ESDKLA
Sbjct: 167 LRKKLKDELENKNTIQEYICPNCGRRYNALDALQLLCPDDEYFHCENCNGELVTESDKLA 226
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWE 115
AQEGGDGDDNARRR+REKLKDLLQK+EV LKPLM+Q+NRVKDL VPEFG LQAWE
Sbjct: 227 AQEGGDGDDNARRRQREKLKDLLQKMEVQLKPLMDQLNRVKDLPVPEFGNLQAWE 281
>gi|449531476|ref|XP_004172712.1| PREDICTED: uncharacterized protein LOC101232004 [Cucumis sativus]
Length = 188
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 140/173 (80%), Gaps = 3/173 (1%)
Query: 146 MPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVLPPWMIKQGMNLTKEQRGEVKQESKM 205
MPF+G+TKVEVAFSGAEG VD KSE+++T KVLPPWMIK+GMNLTKEQRGEVK ESK
Sbjct: 1 MPFVGETKVEVAFSGAEGTGVDAKSESENTSLKVLPPWMIKKGMNLTKEQRGEVKDESKT 60
Query: 206 DGSSATGGLSDDKKSTV-EDDKASLQDEYIRAYYAALLKKQQELDEAAKNQQESSNTPIS 264
D SA+ SDDKKS +DDK ++QDEY++AYYAA+LKKQQEL+EAAK QQE S+T ++
Sbjct: 61 DAGSASAQFSDDKKSLANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKGQQELSSTEVT 120
Query: 265 DGLSGASSNRQVGMKSKREEVEGDDDVDWEEAPVAGTTSESFKVHDLNVEAEA 317
+ ++ +S+RQVGMK+KREE E DD EEAP+ G +E++KV DLNVEA A
Sbjct: 121 ESVANTNSSRQVGMKAKREEDEDDDIEW-EEAPIGGNANENYKV-DLNVEASA 171
>gi|39545892|gb|AAR28009.1| TFIIE-alpha 2 [Arabidopsis thaliana]
Length = 275
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/235 (53%), Positives = 160/235 (68%), Gaps = 14/235 (5%)
Query: 53 VAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQ 112
V E +KL ++E D DNARRR+REK+K LQ LE LKPLME INRVKDL P F
Sbjct: 1 VMECNKLISEEVVDRGDNARRRQREKVKVWLQDLEGELKPLMELINRVKDLPFPAFEPFP 60
Query: 113 AWEARASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSET 172
A +A NGD + +DP++S GYG TPMPFLG+TKVEV EG + DV S
Sbjct: 61 A-WEARAAKAARENGDFNPDDPSRSLGGYGSTPMPFLGETKVEVNL--GEGNE-DVTSTG 116
Query: 173 DSTPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVE--DDKASLQ 230
+ K+LPPWMIKQGM LT+EQRGE++QE+ +DG +A LSDDKKS +E DD L+
Sbjct: 117 GDSSLKMLPPWMIKQGMKLTEEQRGEMRQEANVDGEAAK--LSDDKKSVMENGDDNKDLK 174
Query: 231 DEYIRAYYAALLKKQQELDEAAK-NQQESSNTPISDGLSGAS--SNRQVGMKSKR 282
DEY++AYYAA++ +QQ+L AAK N+QES+ + + A+ S+RQVGMKSKR
Sbjct: 175 DEYLKAYYAAIM-EQQKL--AAKLNEQESAGESTTTDIESATTYSDRQVGMKSKR 226
>gi|255587094|ref|XP_002534133.1| transcription initiation factor iie, alpha subunit, putative
[Ricinus communis]
gi|223525805|gb|EEF28250.1| transcription initiation factor iie, alpha subunit, putative
[Ricinus communis]
Length = 180
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/168 (69%), Positives = 137/168 (81%), Gaps = 3/168 (1%)
Query: 154 VEVAFSGAEGKQVDVKSETDSTPQKVLPPWMIKQGMNLTKEQRGE-VKQESKMDGSSATG 212
VEVAFSG GK+ DVK ET+ + KVLPPWMIKQGMNLTKEQRGE VKQESKMDGSSA
Sbjct: 3 VEVAFSGVGGKEEDVKPETEGSGLKVLPPWMIKQGMNLTKEQRGEVVKQESKMDGSSAAP 62
Query: 213 GLSDDKKSTVEDDKAS-LQDEYIRAYYAALLKKQQELDEAAKNQQESSNTPISDGLSGAS 271
SDDKK+ D A+ QDEY +AYYAAL K+QQEL+EAAK +QESS+TPIS+G++ S
Sbjct: 63 EFSDDKKAINNGDSATQYQDEYAKAYYAALFKRQQELEEAAK-KQESSHTPISNGVTELS 121
Query: 272 SNRQVGMKSKREEVEGDDDVDWEEAPVAGTTSESFKVHDLNVEAEASA 319
SNRQVGMKSKREE EG+D+++WEE+ G +ES+KV+DLNVEAEAS
Sbjct: 122 SNRQVGMKSKREEDEGEDEIEWEESTTGGNATESYKVNDLNVEAEASG 169
>gi|194694976|gb|ACF81572.1| unknown [Zea mays]
Length = 336
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/243 (47%), Positives = 154/243 (63%), Gaps = 17/243 (6%)
Query: 89 HLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPNKSSQGYGGTPMPF 148
LKPL+ Q++RVK++ PEFG+LQ WE RA+ G A GD ++ D +++SQG GTPMP+
Sbjct: 110 QLKPLVAQLDRVKNIPAPEFGSLQTWE-RANI-GAFAIGDPAAADSSRNSQGQYGTPMPY 167
Query: 149 LGDTKVEVAFSGAEGKQVDVKSETDSTPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGS 208
+G+TKVEV K+ +TDS KVLPPWMIK GMNLTKEQRGE+ K++ S
Sbjct: 168 IGETKVEVDLLSDGVKEGAESGKTDSE-LKVLPPWMIKDGMNLTKEQRGEIIAPQKLEKS 226
Query: 209 SATGGLSDDKKSTVEDDKASLQDEYIRAYYAALLKKQQELDEAAKNQQESSNTPISDGLS 268
A D K D S+Q+EYI+AYY AL KKQ+E +EA + Q+ + D
Sbjct: 227 DAK-----DDKKHDLKDDHSVQEEYIKAYYEALRKKQEE-EEAKRRMQQEGKVFLPD--- 277
Query: 269 GASSNRQVGMKSKREEVEGDDD-VDWEEAPVAGTTSESFKVHDLNVEAEASAEDEDDIDW 327
+ RQVG K KR +GDD+ ++WEE G +E++K+ DLN EA+ S +DEDD W
Sbjct: 278 -FQTERQVGKKYKR---DGDDEGIEWEEHQPTGYATETYKLADLNAEAQESGDDEDDNVW 333
Query: 328 EEG 330
EEG
Sbjct: 334 EEG 336
>gi|346703733|emb|CBX24401.1| hypothetical_protein [Oryza glaberrima]
Length = 292
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 171/287 (59%), Gaps = 19/287 (6%)
Query: 40 DDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINR 99
DD FHCE+C +L+ ES+KL E G DNA + + +KLKD+ Q++E LKPL+ ++R
Sbjct: 2 DDYFHCEHCKEQLLPESEKLTLDEVVCGGDNAIKHKHDKLKDMQQRMEEQLKPLIAVLDR 61
Query: 100 VKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPNKSSQG-YGGTPMPFLGDTKVEVAF 158
VKDL P F +LQ WE RA+ +ANG S +++S+G Y PMPFLG+T+VEV F
Sbjct: 62 VKDLPFPSFMSLQDWE-RATMEA-SANGAVGS---SQNSEGRYSSKPMPFLGETEVEVNF 116
Query: 159 SGAEGKQVDVKSETDST-PQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDD 217
G+ G Q V+S +S PQ P WM ++ + LT E +GE+ + +D SS SD
Sbjct: 117 LGSTGAQEGVESGMESIKPQ---PSWMNRKSIVLTGEHKGEISNTADLDQSSEAK--SDK 171
Query: 218 KKSTVEDDKASLQDEYIRAYYAALLKKQQ-ELDEAAKNQQESSNTPISD--GLSGASSNR 274
K+ + ED+ S+Q+ Y +AYY A+ K+Q+ + DE + QE S T ISD S A R
Sbjct: 172 KQLSEEDEMKSIQEAYAKAYYEAIQKRQERQEDEDKRMIQEESLTCISDQPFASDAQFER 231
Query: 275 QVGMKSKREEVEGDDDVDWE---EAPVAGTTSESFKVHDLNVEAEAS 318
++G KSKR++ D E E P G E +K+ DL+VE + S
Sbjct: 232 RLGAKSKRDDGGDSGDDGIEMKVEQPT-GNIGEVYKLADLDVETQES 277
>gi|77552946|gb|ABA95742.1| transcription initiation factor IIE, putative, expressed [Oryza
sativa Japonica Group]
gi|125579826|gb|EAZ20972.1| hypothetical protein OsJ_36624 [Oryza sativa Japonica Group]
Length = 288
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 178/300 (59%), Gaps = 22/300 (7%)
Query: 40 DDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINR 99
DD FHCE+C +L+ ES+KL E G DNA + + +KLKD+ Q++E LKPL+ ++R
Sbjct: 2 DDYFHCEHCKEQLLPESEKLTLDEVVCGGDNAIKHKHDKLKDMQQRMEEQLKPLIAVLDR 61
Query: 100 VKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPNKSSQG-YGGTPMPFLGDTKVEVAF 158
VKDL P F +LQ WE RA+ +ANG S +++S+G Y PMPFLG+T+VEV F
Sbjct: 62 VKDLPFPSFMSLQDWE-RATMEA-SANGAVGS---SQNSEGRYSSKPMPFLGETEVEVNF 116
Query: 159 SGAEGKQVDVKSETDST-PQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDD 217
G+ G Q V+S +S PQ P WM ++ LT E +GE+ + +D SS SD
Sbjct: 117 LGSTGAQEGVESGMESIKPQ---PSWMNRKSTVLTGEHKGEISNTADLDQSSEAK--SDK 171
Query: 218 KKSTVEDDKASLQDEYIRAYYAALLKKQQELDEAAKNQQESSNTPISD--GLSGASSNRQ 275
K+ + +D+ S+Q+ Y +AYY A+ K+Q+ DE + QE S T ISD S A R+
Sbjct: 172 KQLSEKDEMKSIQEAYAKAYYEAIQKRQE--DEDKRMIQEESLTCISDQPFASDAQFERR 229
Query: 276 VGMKSKREEVEGDDDVDWE---EAPVAGTTSESFKVHDLNVEAEASA--EDEDDIDWEEG 330
+G KSKR++ D E E P G E +K+ DL+VE + S +D+DD+ W EG
Sbjct: 230 LGAKSKRDDGGDSGDDGIEMKVEQPT-GNIGEVYKLADLDVETQESIDDDDDDDLVWVEG 288
>gi|449477476|ref|XP_004155034.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
sativus]
Length = 403
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 80/93 (86%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+KKLKDELE KNTVQEYICPNC RRY ALDALRL+S ED+ FHCENCNGELVAESDKLA
Sbjct: 144 MKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISFEDEYFHCENCNGELVAESDKLA 203
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPL 93
A +G DGDDN R+RR EKLKD+LQK+E P+
Sbjct: 204 AVQGVDGDDNVRKRRHEKLKDMLQKMEYLPGPV 236
>gi|125533311|gb|EAY79859.1| hypothetical protein OsI_35020 [Oryza sativa Indica Group]
gi|125576147|gb|EAZ17369.1| hypothetical protein OsJ_32892 [Oryza sativa Japonica Group]
Length = 330
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 116/202 (57%), Gaps = 27/202 (13%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+KKLKDEL+ +Q Y+CPNC+RRY++L+AL LVS D++FHC++CN EL + LA
Sbjct: 145 MKKKLKDELDGNYMIQNYVCPNCERRYSSLNALDLVSHIDNNFHCKHCNEELSQDFGDLA 204
Query: 61 -AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARAS 119
GGDG DNARR R KLKD LQ++E ++ L+ Q+N+VKDLD PEF L+ WE
Sbjct: 205 WGGRGGDG-DNARRDRHAKLKDFLQRMEHQMERLISQLNKVKDLDFPEFLALETWERNMR 263
Query: 120 AAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSET------D 173
A GD S PM FLG+ G+ +D E D
Sbjct: 264 ---EPAGGDDVSR------------PMLFLGEVMSHEHQKGS-ASCIDADEEIFEFRVQD 307
Query: 174 STPQKVLPPWMIKQGMNLTKEQ 195
+ P +P ++I++ +N T+++
Sbjct: 308 ARP---IPSFVIRKDINHTEDK 326
>gi|224135303|ref|XP_002322033.1| predicted protein [Populus trichocarpa]
gi|222869029|gb|EEF06160.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 58/63 (92%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRKKLKDELE KNTVQEY CPNC RRYNALDALRL+SL D+ FHCENC+GELVAESDKLA
Sbjct: 136 MRKKLKDELEDKNTVQEYTCPNCGRRYNALDALRLMSLVDEYFHCENCDGELVAESDKLA 195
Query: 61 AQE 63
AQE
Sbjct: 196 AQE 198
>gi|414868386|tpg|DAA46943.1| TPA: hypothetical protein ZEAMMB73_735721 [Zea mays]
Length = 245
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 84/122 (68%), Gaps = 3/122 (2%)
Query: 89 HLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPNKSSQGYGGTPMPF 148
LKPL+ Q++RVK++ PEFG+LQ WE RA+ G A GD ++ D +++SQG GTPMP+
Sbjct: 108 QLKPLVAQLDRVKNIPAPEFGSLQTWE-RANI-GAFAIGDPAAADSSRNSQGQYGTPMPY 165
Query: 149 LGDTKVEVAFSGAEGKQVDVKSETDSTPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGS 208
+G+TKVEV K+ +TDS KVLPPWMIK GMNLTKEQRGE+ K++ S
Sbjct: 166 IGETKVEVDLLSDGVKEGAESGKTDSE-LKVLPPWMIKDGMNLTKEQRGEIIAPQKLEKS 224
Query: 209 SA 210
A
Sbjct: 225 DA 226
>gi|39545890|gb|AAR28008.1| TFIIE-alpha 2 [Arabidopsis thaliana]
Length = 215
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 58/66 (87%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
++KK KDELE +NTVQEY CPNC+R+YNALDALRL+S+EDDSFHCENCNGELV E +KL
Sbjct: 149 LKKKFKDELEDRNTVQEYGCPNCKRKYNALDALRLISMEDDSFHCENCNGELVMECNKLI 208
Query: 61 AQEGGD 66
++E D
Sbjct: 209 SEEVVD 214
>gi|218186414|gb|EEC68841.1| hypothetical protein OsI_37425 [Oryza sativa Indica Group]
gi|222612618|gb|EEE50750.1| hypothetical protein OsJ_31089 [Oryza sativa Japonica Group]
Length = 350
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 54/282 (19%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M LK +LE NTV +Y CPNC + ++A D LVS D +F+CE+C ELVA S+
Sbjct: 99 MEANLKSQLENTNTVDKYTCPNCGKSFSAFDVKDLVSCTDGNFYCESCKHELVACSEY-- 156
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
G+ N R R L D L+ ++ L+PL +++ ++DL P+FG+ ++
Sbjct: 157 ------GNYNEREGRSANLLDFLENMKEKLRPLKTKLDLLEDLPAPDFGSTPDFK----- 205
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
G + +D +++S P+P T + +FS K D +S+ + K+L
Sbjct: 206 ------GTYNISDWSRTS-----VPLP--EPTNGDDSFSSPCAK--DDESDAGVSELKIL 250
Query: 181 PPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYAA 240
P W+I++GM L +++ + SS G + ++Q+EY++AYY A
Sbjct: 251 PSWLIRKGMKL---------KQAHLSNSSTVCG----------EGGTNIQEEYMKAYYEA 291
Query: 241 LLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKR 282
+ K+Q++ + S + + G S SS R +G+K ++
Sbjct: 292 IQKRQED------RIRHSGQSSVPGGPS-VSSERPMGVKRQK 326
>gi|224144258|ref|XP_002336124.1| predicted protein [Populus trichocarpa]
gi|222873356|gb|EEF10487.1| predicted protein [Populus trichocarpa]
Length = 130
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
Query: 167 DVKSETDSTPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDD- 225
D+K ET ST KVL PWM+K+GMNLTK+QRGEV QE+K+D SSA SD+KKS E+D
Sbjct: 6 DIKYETVSTGLKVLLPWMVKKGMNLTKDQRGEVHQEAKIDSSSAAVKFSDEKKSAQENDD 65
Query: 226 -KASLQDEYIRAYYAALLKKQQELDEAAKNQQESSNTP 262
L ++Y ++YYAALL+KQ++ +E+AK Q+ P
Sbjct: 66 QHKGLWNDYAKSYYAALLQKQRQAEESAKKQKSCLRHP 103
>gi|384244978|gb|EIE18474.1| kinase-like protein [Coccomyxa subellipsoidea C-169]
Length = 906
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRK LK++L+ V EY+CP C RY L A L+ D FHCENC L + D A
Sbjct: 166 MRKALKEKLKDSTPVLEYVCPACGTRYTTLQAAHLIDFADGEFHCENCRSILRSSRDGAA 225
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRV-----KDLDVPEFGTLQAWE 115
DG + AR++R + K L +K+E L+PL + + K VP FG+L+ W
Sbjct: 226 -----DGGEGARQQRLKAAKVLQEKMEEQLRPLFSLLEEIQGRLAKGGKVPNFGSLKDWA 280
Query: 116 ARASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDST 175
A R A G + D G VEV +GA ++ ++
Sbjct: 281 LARMDAQRVATGRAMRLDD---------------GPASVEVDMAGAAAAPQPLE---EAQ 322
Query: 176 PQKVLPPWM 184
P++ LPPW+
Sbjct: 323 PRE-LPPWL 330
>gi|307108331|gb|EFN56571.1| hypothetical protein CHLNCDRAFT_51546 [Chlorella variabilis]
Length = 1245
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MR+ LK + V EY+C C Y +LDA+RL+ +F CE C+ EL A + A
Sbjct: 155 MREVLKKHMGHGEDVAEYLCRRCGATYTSLDAVRLLDHATGAFLCEECHAELDANIE--A 212
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQ 112
A GG +R++ ++ K +L+K+E L+P+++Q+ ++KD+ P+FG+L+
Sbjct: 213 AGLGGSSGAASRQQLQQYAKRMLEKMETQLRPILDQLEKLKDVPPPDFGSLR 264
>gi|255084175|ref|XP_002508662.1| transcription initiation factor IIE, alpha subunit [Micromonas sp.
RCC299]
gi|226523939|gb|ACO69920.1| transcription initiation factor IIE, alpha subunit [Micromonas sp.
RCC299]
Length = 437
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 25/225 (11%)
Query: 23 CQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNA--RRRRREKLK 80
C +RY++LDA+RL+ F C+ C GE+V Q GG G+D A R +E +K
Sbjct: 170 CGKRYSSLDAMRLLDPTTGLFTCQVCRGEVV--------QLGG-GEDGAPPEPRTKEGMK 220
Query: 81 DLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPNKSSQG 140
+L K E P++ Q+ +V+ L P++GTL W A A G+ +
Sbjct: 221 AILAKFETQTAPVLRQLAKVRGLTPPQYGTLNEWTRARRRAFANAAGNGGQGLGSNGQGL 280
Query: 141 YGGTPMPF----LGDTKVEVAFSGAEGKQVDVKSETDSTPQKVLPPWMIKQGMNLTKEQR 196
G M L DT EV E ++ ++++ + P+K P W+ K + + EQ
Sbjct: 281 GSGGGMAINVDNLEDTTFEVTLGLTEEQEAELEAAAN--PKKAQPEWL-KGSVYVDDEQ- 336
Query: 197 GEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYAAL 241
++ + ++ + ++ ++ ++ ++++E++RAY A+
Sbjct: 337 ------TETNEANDDETKEETEEDRLKKNEEAIKEEWLRAYLEAI 375
>gi|254570555|ref|XP_002492387.1| TFIIE large subunit [Komagataella pastoris GS115]
gi|238032185|emb|CAY70153.1| TFIIE large subunit [Komagataella pastoris GS115]
gi|328353599|emb|CCA39997.1| Zinc finger protein 287 [Komagataella pastoris CBS 7435]
Length = 392
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 19/129 (14%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
K LKD++ + Q Y+CP C++RY+ LDAL +VS +F C+ CNG L+ + + A
Sbjct: 104 KSLKDQMAHDSDPQGYVCPRCRKRYSQLDALSMVSDNKLNFVCDICNGVLIEDDSGIQA- 162
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVP----EFGTLQAWEARA 118
+RR+EKL L+ +L+ P++ + R+ + V E +A A++
Sbjct: 163 ----------KRRQEKLTQLMGELD----PIIGYLKRIDEGHVVDNTFETSLTRAVPAQS 208
Query: 119 SAAGRAANG 127
S A +G
Sbjct: 209 STVSAAESG 217
>gi|168015146|ref|XP_001760112.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688862|gb|EDQ75237.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 245
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 14/85 (16%)
Query: 169 KSETDSTPQKVLPPWMIKQGMNLTKEQRGEVKQ----ESKMDGSSATGGLSDDKKSTVED 224
K ET + P +LPPWMI++GMNL +QRGE + E S+A D K ED
Sbjct: 55 KDETAAGPTNILPPWMIREGMNLNAKQRGEALEGEWNEDNFGTSNA------DIKPAEED 108
Query: 225 DKA---SLQDEY-IRAYYAALLKKQ 245
+A LQ+EY IRAYY A+L Q
Sbjct: 109 KEAMQKKLQEEYLIRAYYVAILASQ 133
>gi|406602083|emb|CCH46326.1| General transcription factor IIE subunit 1 [Wickerhamomyces
ciferrii]
Length = 446
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
+KDE+ NT Q YICP C+ +Y+ LDA+ L++ E + F C CN EL+ + A+E
Sbjct: 105 IKDEMHATNTPQGYICPVCKTKYSQLDAIALLNYEKNEFLCSLCNEELIEDDSGKIAKEN 164
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQ 96
+ + KL D L+ + +LK + E
Sbjct: 165 --------QIKYSKLMDQLEPVINYLKKIDEH 188
>gi|145341078|ref|XP_001415642.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575865|gb|ABO93934.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 424
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 27/249 (10%)
Query: 1 MRKKLKDELECKNTVQEYIC--PN--CQRRYNALDALRLVSLEDDSFHCENCNGELVAES 56
M+K+ + ++ + Y+C P C + Y++LDA L+ + F C NC E+
Sbjct: 169 MKKQARQRVDKGKIHEVYVCVGPTEFCGKIYSSLDAAALLDPVEMVFKCSNCGCEV---- 224
Query: 57 DKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEA 116
+ A ++G + A R +E L+ +LE KPL Q+ + P +GTL W
Sbjct: 225 -RQAGKDGAPEPEGAARETKESLQRRYDELERQFKPLEAQLAKAMKTPAPLYGTLTEW-- 281
Query: 117 RASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTP 176
A A R + +G + L +TK V G+ ++ ++E D+
Sbjct: 282 -AVARKRYSQNKGGGGGGGGGRRGGAALDV-HLEETKFVVEL-GSTAEEQQKQAEIDAI- 337
Query: 177 QKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRA 236
KV P W+ R + ++E G++A G + D + D +Q++Y++A
Sbjct: 338 -KVQPEWVT----------RNQFEKEDAAQGAAANGEDAKDAAAKPTADN-EVQEQYLQA 385
Query: 237 YYAALLKKQ 245
+AL K+Q
Sbjct: 386 LLSALQKQQ 394
>gi|308799637|ref|XP_003074599.1| Transcription initiation factor IIE, alpha subunit (ISS)
[Ostreococcus tauri]
gi|116000770|emb|CAL50450.1| Transcription initiation factor IIE, alpha subunit (ISS)
[Ostreococcus tauri]
Length = 420
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 28/257 (10%)
Query: 1 MRKKLKDELECKNTVQEYICPN----CQRRYNALDALRLVSLEDDSFHCENCNGELVAES 56
M+K+ + ++ + Y+C C + Y++LDA L+ + F C NC E+
Sbjct: 165 MKKQARQAVDKGKVYEVYVCVGPREFCGKMYSSLDAAALLDPTELIFKCSNCGCEV---- 220
Query: 57 DKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEA 116
K A ++G + R +E L+ +LE KPL Q+ + P +GTL W
Sbjct: 221 -KQAGKDGAPEPEGVARETKEVLQKRYNELERQFKPLEAQLAKAMKTPAPLYGTLTEW-- 277
Query: 117 RASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTP 176
A A R A + + + G L +TK V G+ ++ ++E D+
Sbjct: 278 -AVARKRYAQNKGGGGGGSGAGKRGGAALDVHLEETKFVVEL-GSTAEEQQKQAELDAI- 334
Query: 177 QKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRA 236
KV P W+ + ++ E E + +G AT + + +Q++Y++A
Sbjct: 335 -KVQPEWVTRNTFE-KEDAAHENAGEKQGNGEHATPSAASE-----------MQEQYLKA 381
Query: 237 YYAALLKKQQ-ELDEAA 252
+AL K+Q+ +L+EAA
Sbjct: 382 LLSALQKQQEPKLEEAA 398
>gi|320582124|gb|EFW96342.1| TFIIE large subunit [Ogataea parapolymorpha DL-1]
Length = 388
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 15/105 (14%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
+ K +KDE++ + Q Y+CP+C+ +Y+ LDA L+S + SF C C +L+ + +
Sbjct: 107 LVKMVKDEVDQLSDPQGYVCPSCRTKYSLLDAASLLSEDKASFECSVCGDKLIEDDSGME 166
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDV 105
AQ+G +EKL+ L+ ++E P++E + ++ ++ +
Sbjct: 167 AQKG-----------QEKLEKLMSQIE----PIIESLKKIDNMKI 196
>gi|345569272|gb|EGX52140.1| hypothetical protein AOL_s00043g530 [Arthrobotrys oligospora ATCC
24927]
Length = 333
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 31/237 (13%)
Query: 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRRE 77
Y CP C RRY LDAL L++ + F C C +LV + D QE +E
Sbjct: 10 YCCPRCNRRYKPLDALPLINHDTGMFDCSECGTQLVDDDDSAEIQES-----------QE 58
Query: 78 KLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPN-- 135
+L L+ +++ L+ ++ QI++ L VP A A A R + S+ + P
Sbjct: 59 RLGRLMHQMDKILR-MLRQIDQ---LVVPANDFNDAI-AVAVPVTRERSHASALSIPTSV 113
Query: 136 ---KSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVLPPWMIKQGMN-- 190
+ SQG + F D K A AE ++ ++E Q LP W + ++
Sbjct: 114 PIVQVSQG-PTMEIKFTSDEKQTAAELAAEREKKAAQAE-----QNALPVWHTQSTVSGD 167
Query: 191 LTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYAALLKKQQE 247
LT E + + TG ++KK V D+ ++Q I YY AL KQ++
Sbjct: 168 LTTLGSKEAEARAARHIDFKTGTTKEEKKPVV--DQQNVQQSAIDQYYEALKAKQKK 222
>gi|190347268|gb|EDK39510.2| hypothetical protein PGUG_03608 [Meyerozyma guilliermondii ATCC
6260]
Length = 380
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
+ +K+E+ Q Y+CP C +R + LDA+ L+S + F C+ C G L +
Sbjct: 135 LVHTMKEEMTQYGNPQGYLCPRCGKRVSQLDAISLLSADRTHFECDTCGGTLTED----- 189
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
D A R+ L+KL V + P++ + R+ D+ + E T ++ +A
Sbjct: 190 -----DSSQQAYMRQAR-----LEKLMVQVDPVIAHLKRIDDMTIQE-NTFESALTKAVP 238
Query: 121 AGRAANGDSS 130
A A G S
Sbjct: 239 AQSTATGAYS 248
>gi|146416515|ref|XP_001484227.1| hypothetical protein PGUG_03608 [Meyerozyma guilliermondii ATCC
6260]
Length = 380
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
+ +K+E+ Q Y+CP C +R + LDA+ L+S + F C+ C G L +
Sbjct: 135 LVHTMKEEMTQYGNPQGYLCPRCGKRVSQLDAISLLSADRTHFECDTCGGTLTED----- 189
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
D A R+ L+KL V + P++ + R+ D+ + E T ++ +A
Sbjct: 190 -----DSSQQAYMRQAR-----LEKLMVQVDPVIAHLKRIDDMTIQE-NTFESALTKAVP 238
Query: 121 AGRAANGDSS 130
A A G S
Sbjct: 239 AQSTATGAYS 248
>gi|385303345|gb|EIF47425.1| tfiie large subunit [Dekkera bruxellensis AWRI1499]
Length = 517
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
+ K +KDE+ N Q Y+CP C +Y+ LD L+S + F C C LV + L
Sbjct: 61 LVKFVKDEIGQFNDPQGYVCPTCHAKYSLLDVPSLLSEDKMRFECSVCGDTLVEDDTDLE 120
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDV 105
AQ+G +EKL+ L+ +LE P++E + ++ + V
Sbjct: 121 AQKG-----------QEKLERLMAQLE----PIIESLKKIDTMKV 150
>gi|412992217|emb|CCO19930.1| predicted protein [Bathycoccus prasinos]
Length = 462
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 3 KKLKDELE---CKNTVQE-YICPN---CQRRYNALDALRLVSLEDDSFHCENCNGELV-- 53
K +K ELE T +E Y C N C +R++ALD RL ++ F C+ C ++V
Sbjct: 160 KGVKAELERLLAGGTFEESYACKNKEECGKRFSALDTARLFDVKRGGFVCDTCGTDVVRE 219
Query: 54 ---------AESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLD 104
D+ A GG ++ ++ LK ++K + + QI +
Sbjct: 220 GEENDDEEDGNDDQANASSGGIAKES-----KQALKLRMKKFSDQIAGIERQIAKCLRYP 274
Query: 105 VPEFGTLQAWEARASAAGRAANGDSSSNDPNKSSQGYGGT------PMPF---LGDTKVE 155
P FGTLQ + A R+ ++ QGY G+ F L +T E
Sbjct: 275 APSFGTLQEY---VVAKKRSKEAREAAAMGQAGGQGYWGSIGVARGTQAFEQRLEETTFE 331
Query: 156 VAFSGAEGKQVDVKSETDSTPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSA 210
+ G G + + D +K +P W+ ++ L +++G+ ++ K++G+ A
Sbjct: 332 IQIGGENGDKTTNRGGDDGQEKKEMPEWITRE---LQVDEQGKDAKKRKIEGADA 383
>gi|402222376|gb|EJU02443.1| hypothetical protein DACRYDRAFT_22084 [Dacryopinax sp. DJM-731 SS1]
Length = 427
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MR ++ ++L + Q YICP C + Y LD + L+ SF CE C EL+ + +
Sbjct: 107 MRSQIDNKLRNELDNQGYICPYCHKYYAPLDVMHLLDPSGSSFICEVCRHELINNENAES 166
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
Q KD LQ+ + ++E + + ++ +P +Q W A +
Sbjct: 167 VQGS---------------KDRLQRFMAQTRWIIEDLQKTDEITIPRL-NVQQWLAEHAV 210
Query: 121 A 121
A
Sbjct: 211 A 211
>gi|66822505|ref|XP_644607.1| transcription factor IIE [Dictyostelium discoideum AX4]
gi|268638177|ref|XP_002649185.1| transcription factor IIE [Dictyostelium discoideum AX4]
gi|74857717|sp|Q557M8.1|T2EA_DICDI RecName: Full=General transcription factor IIE subunit 1; AltName:
Full=Transcription initiation factor IIE subunit alpha;
Short=TFIIE-alpha
gi|60472767|gb|EAL70717.1| transcription factor IIE [Dictyostelium discoideum AX4]
gi|256013040|gb|EEU04133.1| transcription factor IIE [Dictyostelium discoideum AX4]
Length = 456
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 45/252 (17%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
RKK++ K VQ Y C C + Y ALD +L++++ + CE C+GEL E + +
Sbjct: 110 FRKKMESVKVQKIDVQTYKCQTCHKVYTALDIPKLLNMDTGALACEICDGELEEELNNES 169
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
+ A+ + DL + L+ ++EQ+ + + ++P F AR A
Sbjct: 170 LTQ------TAKHQ-----SDLFSQ----LRKIIEQLKKTEGHNIPLF-------ARDLA 207
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPF-----------LGDTKVEVAFS-------GAE 162
A G S + + N SS G G P F + T + F G E
Sbjct: 208 DLSADQGPSYTINTN-SSLGMGPKPSAFPVAQGAATSHHIDPTNENIEFHVDILDTDGIE 266
Query: 163 GKQVDVKSETDSTPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTV 222
+ VK E T LPPW++ + VK S ++ + T ++++ + V
Sbjct: 267 INKAVVKKENKKTGLASLPPWLLPSN----SFKNRNVKSNSILNNNQQTQTSTNEQPTAV 322
Query: 223 EDDKASLQDEYI 234
++ QD YI
Sbjct: 323 KEQIKIDQDFYI 334
>gi|384484679|gb|EIE76859.1| hypothetical protein RO3G_01563 [Rhizopus delemar RA 99-880]
Length = 312
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 25/192 (13%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M+ ++D+L ++ + Y+C NC + + LD L LV + D FHC+ C+ L
Sbjct: 17 MQTLVRDKLRTESENKGYVCSNCAKTFTPLDVLSLVDMTDQLFHCDQCDTVL-------- 68
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
D +DNA + +++L KL +P++ + + + +P + +
Sbjct: 69 -----DENDNAENVKES--QEVLTKLREQSQPIISLLKQTDSIVIPSSYIYK------NV 115
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
G NG + +Q G GD V++ ++ ++ Q L
Sbjct: 116 PGSRTNGSRADEYELAVAQDTGAGQ----GDIIVDLQMDNEAARRAKLEEAEQKRQQNAL 171
Query: 181 PPWMIKQGMNLT 192
P W K ++ T
Sbjct: 172 PVWHQKSTISDT 183
>gi|413933973|gb|AFW68524.1| hypothetical protein ZEAMMB73_015433 [Zea mays]
Length = 392
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 67/147 (45%), Gaps = 30/147 (20%)
Query: 114 WEARASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEV---AFSGAEGKQVDVKS 170
W ++G D+S N SQ GTPMP +G T VEV + EG +
Sbjct: 249 WMKTTWSSGLWGLLDASGARGN--SQEQYGTPMPHIGQTTVEVDLLKYGVIEGDE----- 301
Query: 171 ETDSTPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQ 230
GMNLTKEQR E + K++ A DK+ ++ D+ S+Q
Sbjct: 302 ---------------SYGMNLTKEQRVEKIESQKLEKYEA----KHDKRHDLKVDQ-SVQ 341
Query: 231 DEYIRAYYAALLKKQQELDEAAKNQQE 257
+EYI AYY AL KK +E + ++ E
Sbjct: 342 EEYINAYYEALRKKLEEKEAKSRMHHE 368
>gi|413933972|gb|AFW68523.1| hypothetical protein ZEAMMB73_015433 [Zea mays]
Length = 353
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 67/147 (45%), Gaps = 30/147 (20%)
Query: 114 WEARASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEV---AFSGAEGKQVDVKS 170
W ++G D+S N SQ GTPMP +G T VEV + EG +
Sbjct: 210 WMKTTWSSGLWGLLDASGARGN--SQEQYGTPMPHIGQTTVEVDLLKYGVIEGDE----- 262
Query: 171 ETDSTPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQ 230
GMNLTKEQR E + K++ A DK+ ++ D+ S+Q
Sbjct: 263 ---------------SYGMNLTKEQRVEKIESQKLEKYEA----KHDKRHDLKVDQ-SVQ 302
Query: 231 DEYIRAYYAALLKKQQELDEAAKNQQE 257
+EYI AYY AL KK +E + ++ E
Sbjct: 303 EEYINAYYEALRKKLEEKEAKSRMHHE 329
>gi|58264940|ref|XP_569626.1| transcription initiation factor TFIIE alpha subunit [Cryptococcus
neoformans var. neoformans JEC21]
gi|134109453|ref|XP_776841.1| hypothetical protein CNBC3320 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259521|gb|EAL22194.1| hypothetical protein CNBC3320 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225858|gb|AAW42319.1| transcription initiation factor TFIIE alpha subunit, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 416
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 14/144 (9%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRK + + ++ + + Y CP R Y+ LD L +F CE+C EL+ E D
Sbjct: 137 MRKGIDERIKSEVGQRGYQCPQDGRVYDTLDVGHLFDPTTSTFRCEDCQAELI-EHDPTI 195
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
QE L+D++Q+ + P+ + + V+ L +P + AW A+
Sbjct: 196 DQENNSS-----------LQDMMQRFNIATAPIRDALKAVEVLTLPSTNVI-AWIAQNVK 243
Query: 121 AG-RAANGDSSSNDPNKSSQGYGG 143
G + NG D K GG
Sbjct: 244 TGVVSVNGQEGGEDSKKFEVVIGG 267
>gi|255713460|ref|XP_002553012.1| KLTH0D06688p [Lachancea thermotolerans]
gi|238934392|emb|CAR22574.1| KLTH0D06688p [Lachancea thermotolerans CBS 6340]
Length = 450
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 61/114 (53%), Gaps = 16/114 (14%)
Query: 4 KLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQE 63
+LKD+L+ + Q Y+CP CQ +Y+ L+A+ L++ E F C C LV
Sbjct: 108 RLKDDLDKNSAPQGYMCPICQSKYSQLEAVSLLNYEKTQFLCSLCEEPLVE--------- 158
Query: 64 GGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEAR 117
DD+ ++ + +++K L +L ++P+++ + ++ D + E T ++ AR
Sbjct: 159 ----DDSGKKSKEKQIK--LNRLMDQVQPIIDYLKKIDDSRIEE-NTFESSLAR 205
>gi|50309565|ref|XP_454794.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643929|emb|CAG99881.1| KLLA0E18657p [Kluyveromyces lactis]
Length = 530
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 16/114 (14%)
Query: 4 KLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQE 63
KLKD+L+ +T Q YICP C R+ L+A+ L++ E F C C LV
Sbjct: 108 KLKDDLDKNSTPQGYICPLCSTRFTQLEAIALLNYERTQFVCSLCEEPLV---------- 157
Query: 64 GGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEAR 117
+D++ +R +EK + L +L ++P+++ + ++ D ++ E T + AR
Sbjct: 158 ----EDDSGKRSKEK-QGRLNRLMDQVQPIIDYLKKIDD-NMIEENTFETALAR 205
>gi|389747948|gb|EIM89126.1| hypothetical protein STEHIDRAFT_154810 [Stereum hirsutum FP-91666
SS1]
Length = 509
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MR+ ++ L + + Y+CP C + Y+ L+ +L+ +F CE C+GEL+
Sbjct: 105 MRRTIEHGLRNELDNKGYVCPQCGKSYSTLEVDKLMDFALGAFVCEICSGELI------- 157
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
DN +D +Q+ ++ ++E + + + + +P F +Q ++
Sbjct: 158 --------DNENAESVRGSQDRMQRFNWQMRYIVEGLRKTEPMVLPAFDVIQFIHKNFTS 209
Query: 121 AGRAANGDSSSNDP 134
A + N +SN+P
Sbjct: 210 ADASQN---ASNEP 220
>gi|354545071|emb|CCE41796.1| hypothetical protein CPAR2_803460 [Candida parapsilosis]
Length = 422
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 26/152 (17%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M +LK E+ Q Y+CP C ++ + LDA+ L+S + F C+ C G L+
Sbjct: 101 MVNQLKQEMSSFGNPQGYVCPRCGKKVSQLDAISLLSEDKTEFICDVCQGVLIE------ 154
Query: 61 AQEGGDGDDNARR--RRREKLKDLLQKLEVHLKPLMEQINRVKDLDVP----EFGTLQAW 114
DD++++ ++EKL+DL+ +++ P+++ + + D + E LQA
Sbjct: 155 -------DDSSQQAILKQEKLEDLMSQID----PIIKYLKIIDDSQIQDNDFESSLLQAI 203
Query: 115 EARASAAGRAANGDSSSNDPNKSSQGYGGTPM 146
A+++ A + + S +KS G M
Sbjct: 204 PAQSTTAAQYTLSNKVS---SKSRSGINAQAM 232
>gi|50556992|ref|XP_505904.1| YALI0F26367p [Yarrowia lipolytica]
gi|49651774|emb|CAG78716.1| YALI0F26367p [Yarrowia lipolytica CLIB122]
Length = 382
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
M K+ ++ L K+ Q Y+CP C +++ L+A+ V + D +F C+ C+ +V
Sbjct: 104 MNKQAEEALGKKSQPQGYVCPLCTKKFTTLEAVTNVQM-DGTFTCDVCSTVIVE------ 156
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
D + R +++L+ L+Q+ +KP+++++ ++ D+ V E T + A+A
Sbjct: 157 -----DTTSDESRVHQDRLEKLMQQ----IKPIIDELRKIDDIQVAE-NTFETSLAKAVP 206
Query: 121 AGRAANGDSSSN 132
A S+S+
Sbjct: 207 AQLEVTAGSTSS 218
>gi|410079126|ref|XP_003957144.1| hypothetical protein KAFR_0D03610 [Kazachstania africana CBS 2517]
gi|372463729|emb|CCF58009.1| hypothetical protein KAFR_0D03610 [Kazachstania africana CBS 2517]
Length = 460
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 74/148 (50%), Gaps = 19/148 (12%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
+ ++LKD+L+ + Y+CP CQ +Y L+A++L++ + F C C+ L+
Sbjct: 105 LVQRLKDDLDKNSAPNGYMCPICQTKYTQLEAIQLLNYDRTEFLCSLCDEPLI------- 157
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + A+
Sbjct: 158 -------EDDSGKKNKEK-QDKLNRLMDQIQPVIDYLKKIDDSRIEE-NTFEFALAKLIP 208
Query: 121 AGRAANGDSSSNDPNKSSQGY--GGTPM 146
+N + N P K S + G PM
Sbjct: 209 PQNQSNAAYTYN-PKKGSTMFRPGDAPM 235
>gi|363755412|ref|XP_003647921.1| hypothetical protein Ecym_7260 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891957|gb|AET41104.1| hypothetical protein Ecym_7260 [Eremothecium cymbalariae
DBVPG#7215]
Length = 472
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 4 KLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQE 63
K+KD+L+ + Q Y+CP C +Y+ L+A+ L++ E F C C LV
Sbjct: 108 KMKDDLDKNSAPQGYMCPVCHSKYSQLEAVSLLNFEKTQFLCSLCEEPLVE--------- 158
Query: 64 GGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA----- 118
DD+ ++ + ++++ L KL ++P+++ + ++ D + E T + AR
Sbjct: 159 ----DDSGKKSKEKQMR--LNKLMDEVQPIIDYLKKIDDSMIEE-NTFETALARLIPPQN 211
Query: 119 -SAAGRAANGDSSSNDP--------NKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVK 169
SAA N + + N SS+ G L V+ A+ + + K
Sbjct: 212 NSAASYTLNPRTRRSKMFQPGESLDNASSRRAGARSQATLHVNITTVSDELAQRELQERK 271
Query: 170 SETDSTPQKVLPPWMIKQ--GMNLTKEQRGEVKQESKMDGSSATGGLSDD 217
+E + Q LP W K G +L + R + +Q + ++A GL D+
Sbjct: 272 AE-EKRKQNALPTWHEKSTIGKSLGRLDRDDWEQMEPTNNAAAENGLKDE 320
>gi|353241952|emb|CCA73731.1| related to TFA1-TFIIE subunit (transcription initiation factor), 66
kD [Piriformospora indica DSM 11827]
Length = 559
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MR +++D L+ + Y+CP C + + LDA RL + F C+ C E+V
Sbjct: 120 MRVQIEDSLKADLDNKGYVCPRCTKSFTTLDADRLFDPMLNIFACDICGTEVV------- 172
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
DN + + KD +Q+ V ++ + E + ++ + +P F + + A
Sbjct: 173 --------DNENSEKVQGSKDRMQRFNVQIRHIREALREIEGIVIPAFDVAR-YVREQMA 223
Query: 121 AGRAAN 126
A RA N
Sbjct: 224 AQRAMN 229
>gi|365991587|ref|XP_003672622.1| hypothetical protein NDAI_0K01880 [Naumovozyma dairenensis CBS 421]
gi|343771398|emb|CCD27379.1| hypothetical protein NDAI_0K01880 [Naumovozyma dairenensis CBS 421]
Length = 436
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 19/146 (13%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKNSAPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ R+ +EK +D L +L ++P+++ + R+ D + E T + AR
Sbjct: 158 -----EDDSGRKNKEK-QDKLNRLMDQIQPVIDYLKRIDDSRIEE-NTFEISLARLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY--GGTPM 146
++ + N P K S + G PM
Sbjct: 211 NQSHAAYTYN-PKKGSTMFRPGDAPM 235
>gi|296413427|ref|XP_002836415.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630233|emb|CAZ80606.1| unnamed protein product [Tuber melanosporum]
Length = 454
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 98/244 (40%), Gaps = 48/244 (19%)
Query: 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNAR-RRRR 76
Y+CP CQ+R++ LDA+ + E F C+ CN LV D DD+A + +
Sbjct: 118 YVCPYCQKRFSILDAMSVARDEMGLFVCDRCNTTLV------------DDDDSAEVKTSQ 165
Query: 77 EKLKDLLQKLEVHLKPLMEQINRVKDLDVP--EFGTLQAWEA----------RASAAGRA 124
E+L L+++ +K +++ + + ++ VP +F T A AG+
Sbjct: 166 ERLGRLMEQ----MKKIIDMLKMIDEIVVPVNDFETAIANSVPVPRDKNHLYSVPVAGKG 221
Query: 125 ANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVLPPWM 184
A SS P + T + E A A+ + + LP W
Sbjct: 222 ATSTRSSGAPASIEVSFTSTSEKTAAELASEQAMKQAQAE------------KNALPVWH 269
Query: 185 IKQGMNLTKEQRGEVKQESKMDGSSATG-GLS------DDKKSTVEDDKASLQDEYIRAY 237
K ++ K+ ++ + + G G++ + KK+ + +Q + I Y
Sbjct: 270 TKSTVDPGATTTAGAKEAAEREARALDGIGIAQKSKEEEGKKAAASNGANGIQADAIAEY 329
Query: 238 YAAL 241
YAAL
Sbjct: 330 YAAL 333
>gi|164658235|ref|XP_001730243.1| hypothetical protein MGL_2625 [Malassezia globosa CBS 7966]
gi|159104138|gb|EDP43029.1| hypothetical protein MGL_2625 [Malassezia globosa CBS 7966]
Length = 437
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 33/297 (11%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCE--NCNGELVAESDK 58
MR+ + +L + Y+CP C+ Y+ L+ L+ L + F CE C ELV
Sbjct: 130 MRRHIDTKLRNGLDNKGYVCPRCRHSYSTLEVAHLLDLTRNMFVCEVPGCGTELV----- 184
Query: 59 LAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
+ D +D KD L + L + + V+ + +P + AW A+
Sbjct: 185 ----DNEDAEDV------RNSKDTLTRFNEQLSVVQRSLRSVEGVALPSLD-IHAWLAKN 233
Query: 119 SAAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVE----VAFSGAEGKQVDVKSETDS 174
S + + ND + G TP P ++E VA E +++ E
Sbjct: 234 STSP-PWQHEMVRNDA-ALAPGSVSTPAPKAPAVRIEMEHDVAHEEVEKEKLRTLEEERQ 291
Query: 175 TPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYI 234
Q LP W + ++ E+ G ES + ++A+ DD K V+D + D+
Sbjct: 292 RVQNTLPSWHL--ASTVSGERTGLGASES-LRRANASSNEWDDVKEVVQDTGTAQDDDV- 347
Query: 235 RAYYAALLKKQQELDEAAKNQQESSNTPISDGLSGASSNRQVGMKSKREEV-EGDDD 290
YYA + Q EAA N + S+ I + + + SKR +GD D
Sbjct: 348 -DYYARYASQAQ---EAAVNAKTSTKREIDGSMGTVDVDDTNDLMSKRPRYDDGDKD 400
>gi|207343451|gb|EDZ70905.1| YKL028Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|365764632|gb|EHN06154.1| Tfa1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 475
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 57/286 (19%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + AR
Sbjct: 158 -----EDDSGKKNKEK-QDKLNRLMDQIQPIIDSLKKIDDSRIEE-NTFEIALARLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY---GGTPMPFLGDTKV---EVAFSGAEGK---QVDVKSETD 173
++ + N P K S + P+P L T + +GA + +++ + +D
Sbjct: 211 NQSHAAYTYN-PKKGSTMFRPGDSAPLPNLMGTALGNDSSRRAGAHSQATLHINITTASD 269
Query: 174 STPQKVL--------------PPWMIKQGMNLTKEQRGEVKQESKMD---GSSATGGLSD 216
Q+ L P W KQ + K G + E + D +SA ++
Sbjct: 270 EVAQRELQERQAEEKRKQNAVPEWH-KQS-TIGKTALGRLDNEEEFDPVVTASAMDSINP 327
Query: 217 D------------KKSTVEDDKASLQDEYIRAYYAALLKKQQELDE 250
D + T ++ + ++ + YYAAL KKQ +L++
Sbjct: 328 DNEPAQETSYQNNRTLTEQEMEERENEKTLNDYYAALAKKQAKLNK 373
>gi|190409793|gb|EDV13058.1| transcription initiation factor IIE alpha subunit [Saccharomyces
cerevisiae RM11-1a]
Length = 476
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 57/286 (19%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + AR
Sbjct: 158 -----EDDSGKKNKEK-QDKLNRLMDQIQPIIDSLKKIDDSRIEE-NTFEIALARLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY---GGTPMPFLGDTKV---EVAFSGAEGK---QVDVKSETD 173
++ + N P K S + P+P L T + +GA + +++ + +D
Sbjct: 211 NQSHAAYTYN-PKKGSTMFRPGDSAPLPNLMGTALGNDSSRRAGAHSQATLHINITTASD 269
Query: 174 STPQKVL--------------PPWMIKQGMNLTKEQRGEVKQESKMD---GSSATGGLSD 216
Q+ L P W KQ + K G + E + D +SA ++
Sbjct: 270 EVAQRELQERQAEEKRKQNAVPEWH-KQS-TIGKTALGRLDNEEEFDPVVTASAMDSINP 327
Query: 217 D------------KKSTVEDDKASLQDEYIRAYYAALLKKQQELDE 250
D + T ++ + ++ + YYAAL KKQ +L++
Sbjct: 328 DNEPAQETSYQNNRTLTEQEMEERENEKTLNDYYAALAKKQAKLNK 373
>gi|302309290|ref|NP_986599.2| AGL067Wp [Ashbya gossypii ATCC 10895]
gi|299788288|gb|AAS54423.2| AGL067Wp [Ashbya gossypii ATCC 10895]
gi|374109850|gb|AEY98755.1| FAGL067Wp [Ashbya gossypii FDAG1]
Length = 481
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 16/114 (14%)
Query: 4 KLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQE 63
K+KD+L+ + Q Y+CP C +Y+ L+A+ L++ E F C C L+
Sbjct: 125 KMKDDLDKNSAPQGYMCPVCHAKYSQLEAISLLNFEKTQFLCSLCEEPLIE--------- 175
Query: 64 GGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEAR 117
DD+ ++ + ++++ L +L ++P+++ + ++ D + E T + AR
Sbjct: 176 ----DDSGKKSKEKQMR--LNRLMDQVQPIIDYLKKIDDSMIEE-NTFETALAR 222
>gi|303287664|ref|XP_003063121.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455757|gb|EEH53060.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 379
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 19/167 (11%)
Query: 2 RKKLKDELECKNTVQEYICPN----CQRRYNALDALRLVSL---EDDSFHCENCNGELVA 54
R+ L+ +E Y C + C +RY +LDA RL+ + +F C+ C E+V
Sbjct: 145 RRNLRRNIERGPASVLYRCVSEDDVCGKRYTSLDAARLLGAFYAQSMTFRCQVCRCEVV- 203
Query: 55 ESDKLAAQEGGDGDDNA--RRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQ 112
Q GG G+D A + +E +K L E + + +Q++RVK P++GTL
Sbjct: 204 -------QLGG-GEDGAPPEPKTKEGMKKALADFEREVSIVQKQLDRVKGKTPPQYGTLN 255
Query: 113 AW-EARASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAF 158
W A A RA + D + +G G L DTK EV
Sbjct: 256 EWTRAMKIRAARAGDADGHHHHGGGGGRGGLGVQTDDLEDTKFEVTL 302
>gi|259147805|emb|CAY81055.1| Tfa1p [Saccharomyces cerevisiae EC1118]
Length = 474
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 57/286 (19%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + AR
Sbjct: 158 -----EDDSGKKNKEK-QDKLNRLMDQIQPIIDSLKKIDDSRIEE-NTFEIALARLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY---GGTPMPFLGDTKV---EVAFSGAEGK---QVDVKSETD 173
++ + N P K S + P+P L T + +GA + +++ + +D
Sbjct: 211 NQSHAAYTYN-PKKGSTMFRPGDSAPLPNLMGTALGNDSSRRAGANSQATLHINITTASD 269
Query: 174 STPQKVL--------------PPWMIKQGMNLTKEQRGEVKQESKMD---GSSATGGLSD 216
Q+ L P W KQ + K G + E + D +SA ++
Sbjct: 270 EVAQRELQERQAEEKRKQNAVPEWH-KQS-TIGKTALGRLDNEEEFDPVVTASAMDSINP 327
Query: 217 D------------KKSTVEDDKASLQDEYIRAYYAALLKKQQELDE 250
D + T ++ + ++ + YYAAL KKQ +L++
Sbjct: 328 DNEPAQETSYQNNRTLTEQEMEERENEKTLNDYYAALAKKQAKLNK 373
>gi|398364645|ref|NP_012897.3| Tfa1p [Saccharomyces cerevisiae S288c]
gi|549038|sp|P36100.1|T2EA_YEAST RecName: Full=Transcription initiation factor IIE subunit alpha;
Short=TFIIE-alpha; AltName: Full=Factor A 66 kDa
subunit; AltName: Full=Transcription factor A large
subunit
gi|486027|emb|CAA81863.1| TFA1 [Saccharomyces cerevisiae]
gi|607958|gb|AAA62665.1| transcription factor TFIIE, large subunit [Saccharomyces
cerevisiae]
gi|285813229|tpg|DAA09126.1| TPA: Tfa1p [Saccharomyces cerevisiae S288c]
gi|392298108|gb|EIW09206.1| Tfa1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 482
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 57/286 (19%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + AR
Sbjct: 158 -----EDDSGKKNKEK-QDKLNRLMDQIQPIIDSLKKIDDSRIEE-NTFEIALARLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY---GGTPMPFLGDTKV---EVAFSGAEGK---QVDVKSETD 173
++ + N P K S + P+P L T + +GA + +++ + +D
Sbjct: 211 NQSHAAYTYN-PKKGSTMFRPGDSAPLPNLMGTALGNDSSRRAGANSQATLHINITTASD 269
Query: 174 STPQKVL--------------PPWMIKQGMNLTKEQRGEVKQESKMD---GSSATGGLSD 216
Q+ L P W KQ + K G + E + D +SA ++
Sbjct: 270 EVAQRELQERQAEEKRKQNAVPEWH-KQS-TIGKTALGRLDNEEEFDPVVTASAMDSINP 327
Query: 217 D------------KKSTVEDDKASLQDEYIRAYYAALLKKQQELDE 250
D + T ++ + ++ + YYAAL KKQ +L++
Sbjct: 328 DNEPAQETSYQNNRTLTEQEMEERENEKTLNDYYAALAKKQAKLNK 373
>gi|349579532|dbj|GAA24694.1| K7_Tfa1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 482
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 57/286 (19%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + AR
Sbjct: 158 -----EDDSGKKNKEK-QDKLNRLMDQIQPIIDSLKKIDDSRIEE-NTFEIALARLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY---GGTPMPFLGDTKV---EVAFSGAEGK---QVDVKSETD 173
++ + N P K S + P+P L T + +GA + +++ + +D
Sbjct: 211 NQSHAAYTYN-PKKGSTMFRPGDSAPLPNLMGTALGNDSSRRAGANSQATLHINITTASD 269
Query: 174 STPQKVL--------------PPWMIKQGMNLTKEQRGEVKQESKMD---GSSATGGLSD 216
Q+ L P W KQ + K G + E + D +SA ++
Sbjct: 270 EVAQRELQERQAEEKRKQNAVPEWH-KQS-TIGKTALGRLDNEEEFDPVVTASAMDSINP 327
Query: 217 D------------KKSTVEDDKASLQDEYIRAYYAALLKKQQELDE 250
D + T ++ + ++ + YYAAL KKQ +L++
Sbjct: 328 DNEPAQETSYQNNRTLTEQEMEERENEKTLNDYYAALAKKQAKLNK 373
>gi|151941515|gb|EDN59878.1| transcription factor tfIIE large subunit [Saccharomyces cerevisiae
YJM789]
Length = 481
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 57/286 (19%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + AR
Sbjct: 158 -----EDDSGKKNKEK-QDKLNRLMDQIQPIIDSLKKIDDSRIEE-NTFEIALARLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY---GGTPMPFLGDTKV---EVAFSGAEGK---QVDVKSETD 173
++ + N P K S + P+P L T + +GA + +++ + +D
Sbjct: 211 NQSHAAYTYN-PKKGSTMFRPGDSAPLPNLMGTALGNDSSRRAGANSQATLHINITTASD 269
Query: 174 STPQKVL--------------PPWMIKQGMNLTKEQRGEVKQESKMD---GSSATGGLSD 216
Q+ L P W KQ + K G + E + D +SA ++
Sbjct: 270 EVAQRELQERQAEEKRKQNAVPEWH-KQS-TIGKTALGRLDNEEEFDPVVTASAMDSINP 327
Query: 217 D------------KKSTVEDDKASLQDEYIRAYYAALLKKQQELDE 250
D + T ++ + ++ + YYAAL KKQ +L++
Sbjct: 328 DNEPAQETSYQNNRTLTEQEMEERENEKTLNDYYAALAKKQAKLNK 373
>gi|256271539|gb|EEU06582.1| Tfa1p [Saccharomyces cerevisiae JAY291]
Length = 473
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 57/286 (19%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + AR
Sbjct: 158 -----EDDSGKKNKEK-QDKLNRLMDQIQPIIDSLKKIDDSRIEE-NTFEIALARLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY---GGTPMPFLGDTKV---EVAFSGAEGK---QVDVKSETD 173
++ + N P K S + P+P L T + +GA + +++ + +D
Sbjct: 211 NQSHAAYTYN-PKKGSTMFRPGDSAPLPNLMGTALGNDSSRRAGANSQATLHINITTASD 269
Query: 174 STPQKVL--------------PPWMIKQGMNLTKEQRGEVKQESKMD---GSSATGGLSD 216
Q+ L P W KQ + K G + E + D +SA ++
Sbjct: 270 EVAQRELQERQAEEKRKQNAVPEWH-KQS-TIGKTALGRLDNEEEFDPVVTASAMDSINP 327
Query: 217 D------------KKSTVEDDKASLQDEYIRAYYAALLKKQQELDE 250
D + T ++ + ++ + YYAAL KKQ +L++
Sbjct: 328 DNEPAQETSYQNNRTLTEQEMEERENEKTLNDYYAALAKKQAKLNK 373
>gi|149246936|ref|XP_001527893.1| hypothetical protein LELG_00413 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447847|gb|EDK42235.1| hypothetical protein LELG_00413 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 511
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
LK+E+ Q Y+CP C ++ + LDA+ L+S + F C+ C+G L+
Sbjct: 105 LKEEMSNYGNPQGYMCPRCGKKISQLDAISLLSEDKTEFVCDVCSGVLIE---------- 154
Query: 65 GDGDDNARR--RRREKLKDLLQKLEV---HLKPLMEQINRVKDLDVPEFGTLQAWEARAS 119
DD++++ ++EKL+DL+ +++ +LK + E +++D D E LQA A+++
Sbjct: 155 ---DDSSQQAIAKQEKLEDLMSQIDPIIKYLKIIDEIQYKIQDNDF-ESSLLQAIPAQSA 210
Query: 120 AAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFS--GAEGKQVDVKSETDSTPQ 177
+ + + S+ +Q V + + E +Q++ + Q
Sbjct: 211 STAQYTLSNRVSSKSRSYAQSLQNATARSQATLHVSITANDENYEREQLEKERRRQKLEQ 270
Query: 178 KVLPPW 183
LP W
Sbjct: 271 NALPSW 276
>gi|336375502|gb|EGO03838.1| hypothetical protein SERLA73DRAFT_175515 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388618|gb|EGO29762.1| hypothetical protein SERLADRAFT_458004 [Serpula lacrymans var.
lacrymans S7.9]
Length = 474
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 19/104 (18%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
L++EL+ K YICP C + Y+ L+A +L+ E F CE C+ ELV
Sbjct: 115 LRNELDNKG----YICPQCTKSYSPLEADKLIDFERGVFLCEICHAELV----------- 159
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEF 108
DN + +D +Q+ ++ + E + + + + +P F
Sbjct: 160 ----DNENAESVKGSQDRMQRFNKQMQFIREGLRKTESMVIPAF 199
>gi|366987321|ref|XP_003673427.1| hypothetical protein NCAS_0A04820 [Naumovozyma castellii CBS 4309]
gi|342299290|emb|CCC67040.1| hypothetical protein NCAS_0A04820 [Naumovozyma castellii CBS 4309]
Length = 471
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 72/146 (49%), Gaps = 19/146 (13%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ L+
Sbjct: 107 QRLKDDLDKNSAPNGYMCPICSTKYTQLEAVQLLNFDRTEFLCSLCDEPLI--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L +L ++P+++ + R+ D + E T + AR
Sbjct: 158 -----EDDSGKKNKEK-QDKLNRLMDQVQPIIDYLKRIDDSRIEE-NTFEIALARLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY--GGTPM 146
++ + N P K S + G P+
Sbjct: 211 NQSHAAYTFN-PKKGSNMFRPGDAPI 235
>gi|405119152|gb|AFR93925.1| transcription initiation factor TFIIE alpha subunit [Cryptococcus
neoformans var. grubii H99]
Length = 416
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 14/144 (9%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRK + + ++ + + Y CP R Y+ LD L +F CE+C EL+ E D
Sbjct: 137 MRKGIDERIKSEVGQRGYQCPQDGRVYDTLDVGHLFDPTTSTFRCEDCQAELI-EHDPTI 195
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
QE L+D++Q+ + P+ + + V+ + +P + AW A+
Sbjct: 196 DQENNSS-----------LQDMMQRFNIATAPIRDALKAVEVVTLPGTNVI-AWIAQNVK 243
Query: 121 AG-RAANGDSSSNDPNKSSQGYGG 143
G + +G D K GG
Sbjct: 244 TGVVSVDGQEGGEDSKKFEVVIGG 267
>gi|260949579|ref|XP_002619086.1| hypothetical protein CLUG_00245 [Clavispora lusitaniae ATCC 42720]
gi|238846658|gb|EEQ36122.1| hypothetical protein CLUG_00245 [Clavispora lusitaniae ATCC 42720]
Length = 363
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 38/235 (16%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
+K+E+ Y+CP C ++ + LDA+ L+S + SF C++C+G LV
Sbjct: 105 IKEEMSSYGNPHGYLCPRCGKKVSQLDAISLLSDDGASFICDSCSGVLVE---------- 154
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAW-EARASAAGR 123
DD++++ ++ K L+KL + L P++ + ++ + D+ + A +A + +G
Sbjct: 155 ---DDSSQQASIKQEK--LEKLMLQLDPIIGYLKKIDNSDIEDNNFEMALTKAIPAQSGS 209
Query: 124 AANGDSSSNDPNKS----SQGYGGTPMPFLGDTKVEVAFS--GAEGKQVDVKSETDSTPQ 177
A+ S+ P KS SQ V + S E +Q + +S Q
Sbjct: 210 TASYMMSNRVPGKSKSQISQSLQNAASKANATLHVSITASDENYEREQQEKESRRQKLEQ 269
Query: 178 KVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDE 232
LP W S + +S+ G DD TV+++K +++E
Sbjct: 270 NALPSW----------------HSASTVGQTSSFGVHDDDADVTVKEEKPVVKEE 308
>gi|403418071|emb|CCM04771.1| predicted protein [Fibroporia radiculosa]
Length = 495
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
L++EL+ K YICP C + ++ LDA +L+ F C+ C E+V
Sbjct: 118 LRNELDNKG----YICPQCGKSFSPLDADKLIDFTSGMFICDICRAEVVE---------- 163
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEF 108
++NA R +D +Q+ ++ L E + R +D+ +P F
Sbjct: 164 ---NENAESVRGS--QDRMQRFNRQMRFLREGLRRTEDMVLPAF 202
>gi|340380687|ref|XP_003388853.1| PREDICTED: general transcription factor IIE subunit 1-like
[Amphimedon queenslandica]
Length = 424
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 23/184 (12%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MR++++ E + Y CPNCQ Y+ LD RL+ + C CN L +++
Sbjct: 114 MRERIQAEERTVSNRTSYNCPNCQNTYSDLDVDRLIDPVEGVLKCFMCNTILTEDTE--- 170
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
EG D D ++ +L KL LKP++E + V ++ + E E +
Sbjct: 171 --EGLDVID---------VRSMLSKLNEQLKPVLEILREVDNISLAE----HILEPEPQS 215
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
+ D NKS QG G + D + S G + +++ + QK
Sbjct: 216 IKNLIQENKY--DKNKSQQGKGNWTTSKVDDIYGDQTISINIGTEEELRQKAT---QKDA 270
Query: 181 PPWM 184
P WM
Sbjct: 271 PQWM 274
>gi|429243487|ref|NP_594701.3| transcription factor TFIIE alpha subunit, TFIIEA, Tfa1
[Schizosaccharomyces pombe 972h-]
gi|391358180|sp|Q9P3W1.3|T2EA_SCHPO RecName: Full=Transcription initiation factor IIE subunit alpha;
Short=TFIIE-alpha
gi|18026870|gb|AAL55662.1|AF237419_1 large (alpha-) subunit of general transcription factor TFIIE
[Schizosaccharomyces pombe]
gi|13160455|emb|CAC32853.1| TFIIE large (alpha) subunit [Schizosaccharomyces pombe]
gi|56377911|dbj|BAD74158.1| general transcription factor spTFIIE alpha subunit
[Schizosaccharomyces pombe]
gi|347834206|emb|CAB93849.3| transcription factor TFIIE alpha subunit, TFIIEA, Tfa1
[Schizosaccharomyces pombe]
Length = 434
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 94/237 (39%), Gaps = 39/237 (16%)
Query: 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRRE 77
Y+CP C +++++LD L LV+ E +F C C EL D +++A +
Sbjct: 122 YVCPFCNKKFSSLDVLSLVTNE-GTFACNVCGTEL------------KDDEESAEMMSSQ 168
Query: 78 KLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPNKS 137
K L KL + +++ + RV ++ VP+ Q+ A S N +
Sbjct: 169 K---RLGKLMGQVNGIIDALKRVDEIVVPQ-NNFQSALEHAVPVSLDTQNLSQQNLSKSN 224
Query: 138 SQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDS-----TPQKVLPPWMIKQGMNLT 192
S T P + V FS K+ D K E + Q +LP W + T
Sbjct: 225 SDVRLSTSSP-----SITVDFSA--DKETDEKRERNCDKQVKAAQNILPEW------HAT 271
Query: 193 KEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDE--YIRAYYAALLKKQQE 247
G + + D A + + V+D K + E + AYYA L KQ+E
Sbjct: 272 STISGSITRAGAKDA--ALHSFRTETVNEVQDTKTDITSEKSALDAYYATLRAKQKE 326
>gi|403213854|emb|CCK68356.1| hypothetical protein KNAG_0A07020 [Kazachstania naganishii CBS
8797]
Length = 502
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C+ +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKNSAPNGYMCPICETKYTQLEAVQLLNYDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPE 107
+D++ ++ +EK +D L +L ++P+++ + ++ D + E
Sbjct: 158 -----EDDSGKKNKEK-QDKLNRLMDQIQPVIDYLKKIDDSRIEE 196
>gi|330804608|ref|XP_003290285.1| hypothetical protein DICPUDRAFT_56584 [Dictyostelium purpureum]
gi|325079611|gb|EGC33203.1| hypothetical protein DICPUDRAFT_56584 [Dictyostelium purpureum]
Length = 433
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 121/284 (42%), Gaps = 60/284 (21%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
+RKK++ K + Y C C + ALD +L+S+E + C+ C+G +
Sbjct: 108 IRKKMESIKLQKIDIPTYRCVQCNTSFTALDVPKLLSMETGALECDVCSGSI-------- 159
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
D ++ + + + DLL + LK +++Q+ + + ++P F AR A
Sbjct: 160 ---EEDQNNESLTQTAKHQSDLLGQ----LKKIIDQLRKTEGANIPLF-------ARDLA 205
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTP--MPFLGDTKVEVAFSGAEGKQVDV------KSET 172
A G S + + N SS G G P P ++++ ++ +D+ E
Sbjct: 206 DNTADQGPSYTINTN-SSAGVGPKPSAFPVAQNSQMPSINPTSDNVTLDIDILDSDNIEI 264
Query: 173 DSTPQKV----------LPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTV 222
+ T KV LPPW++ T +R ++Q LS + +STV
Sbjct: 265 NKTTVKVDNSKKTGLASLPPWLLP-----TANKRKILQQ------------LSTNTQSTV 307
Query: 223 EDDKASLQD--EYIRAYYAALLKKQQELDEAAKNQQESSNTPIS 264
+ +++D ++ +Y +K + E+++ ++E + P S
Sbjct: 308 SEQPTAIRDPLKFDSEFYINYIKNHYKEWESSQEEKEILSNPPS 351
>gi|294658517|ref|XP_460857.2| DEHA2F11330p [Debaryomyces hansenii CBS767]
gi|202953190|emb|CAG89202.2| DEHA2F11330p [Debaryomyces hansenii CBS767]
Length = 397
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 15/98 (15%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
+K+E+ Q Y+CP C ++ + LDA+ L+S + +F C+NC G L+
Sbjct: 105 IKEEMTHYGNPQGYVCPRCGKKVSQLDAISLLSDDKTNFECDNCGGVLIE---------- 154
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKD 102
DD++++ + K L+KL + P++ + ++ D
Sbjct: 155 ---DDSSKQASLRQAK--LEKLMNQVDPVISYLKKIDD 187
>gi|344229322|gb|EGV61208.1| hypothetical protein CANTEDRAFT_116666 [Candida tenuis ATCC 10573]
Length = 374
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 16/127 (12%)
Query: 4 KLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQE 63
K+K E+ YIC C ++++ LDA+ L+S + SF C+NC LV +
Sbjct: 104 KIKQEMNQFGNPHGYICKRCTKKFSQLDAIALLSSDRSSFVCDNCGFSLVED-------- 155
Query: 64 GGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGR 123
D ++ A ++ L+KL + P+++ + ++ D V E T +A A A
Sbjct: 156 --DSNEQASIKQES-----LEKLRTQIDPIIDFLKKI-DESVVEDNTFEAALVNAIPAQS 207
Query: 124 AANGDSS 130
++ G S
Sbjct: 208 SSLGSYS 214
>gi|321254848|ref|XP_003193219.1| transcription initiation factor TFIIE alpha subunit [Cryptococcus
gattii WM276]
gi|317459688|gb|ADV21432.1| transcription initiation factor TFIIE alpha subunit, putative
[Cryptococcus gattii WM276]
Length = 416
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 94/250 (37%), Gaps = 56/250 (22%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRK + + ++ + + Y CP Y+ LD L +F CE+C EL+ E D
Sbjct: 137 MRKGIDERIKSEVGQRGYQCPQDGSVYDTLDVGHLFDPTTSTFRCEDCQAELI-EHDPTI 195
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
QE L+D++Q+ + P+ + + V+ + +P + AW A+
Sbjct: 196 DQENNSS-----------LQDMMQRFNLATAPIRDALKAVEVVTLPSTNVI-AWIAQNVK 243
Query: 121 AG-RAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKV 179
G + +G + D K EV G EG++ K Q
Sbjct: 244 TGVVSVDGQEGAEDSK-----------------KFEVVI-GGEGEEDKEKLAQAQREQNA 285
Query: 180 LPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSD--------DKKSTVEDDKASLQD 231
LP W S + G + T G+SD ++ V D + ++D
Sbjct: 286 LPEWYT----------------HSTVTGDATTLGISDINQRAKVAERAKHVGDHETEVED 329
Query: 232 EYIRAYYAAL 241
+ + A+Y L
Sbjct: 330 QALAAHYELL 339
>gi|213401283|ref|XP_002171414.1| transcription initiation factor IIE subunit alpha
[Schizosaccharomyces japonicus yFS275]
gi|211999461|gb|EEB05121.1| transcription initiation factor IIE subunit alpha
[Schizosaccharomyces japonicus yFS275]
Length = 421
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52
YICP C+RRY++LD L LV++ +F C++C EL
Sbjct: 122 YICPLCKRRYSSLDVLSLVTMA-GTFACDDCGTEL 155
>gi|448509595|ref|XP_003866176.1| Tfa1 protein [Candida orthopsilosis Co 90-125]
gi|380350514|emb|CCG20736.1| Tfa1 protein [Candida orthopsilosis Co 90-125]
Length = 416
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 23/126 (18%)
Query: 4 KLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQE 63
+LK E+ Q Y+CP C ++ + LDA+ L+S + F C+ C G L+
Sbjct: 104 QLKQEMSSFGNPQGYVCPRCGKKVSQLDAISLLSEDKTEFICDVCQGVLIE--------- 154
Query: 64 GGDGDDNARR--RRREKLKDLLQKLEVHLKPLMEQINRVKDLDVP----EFGTLQAWEAR 117
DD++++ ++EKL+DL+ + + P+++ + + D + E LQA A+
Sbjct: 155 ----DDSSQQAILKQEKLEDLM----LQIDPIIKYLKIIDDSQIQDNDFESSLLQAIPAQ 206
Query: 118 ASAAGR 123
++ + +
Sbjct: 207 STTSAQ 212
>gi|365759686|gb|EHN01462.1| Tfa1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 484
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 17/139 (12%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + AR
Sbjct: 158 -----EDDSGKKNKEK-QDKLNRLMDQIQPIIDSLKKIDDSRIEE-NTFEIALARLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY 141
++ + N P K S +
Sbjct: 211 NQSHAAYTYN-PKKGSTMF 228
>gi|401842876|gb|EJT44898.1| TFA1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 484
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 17/139 (12%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + AR
Sbjct: 158 -----EDDSGKKNKEK-QDKLNRLMDQIQPIIDSLKKIDDSRIEE-NTFEIALARLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY 141
++ + N P K S +
Sbjct: 211 NQSHAAYTYN-PKKGSTMF 228
>gi|443896928|dbj|GAC74271.1| uroporphyrinogen III synthase UROS/HEM4 [Pseudozyma antarctica
T-34]
Length = 1015
Score = 47.4 bits (111), Expect = 0.010, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 25/214 (11%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCEN--CNGELVAESDK 58
+RKK+ L + + Y+CP C++ Y+ L+ L+ + + F CE C ELV
Sbjct: 126 IRKKIDTRLRNELDNKGYLCPRCKKSYSTLEVAHLLDIFRNVFVCETPGCTTELV----- 180
Query: 59 LAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEAR- 117
DN ++ KD L + L L+ + R + + +P + AW +
Sbjct: 181 ----------DNEEAEDVKRSKDSLMRFNEQLAALLGGLRRTEGIVLPPL-DVGAWLTKH 229
Query: 118 -ASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTP 176
AS AA D + + P+ SS T L + KQ K+E +
Sbjct: 230 AASQPWFAARSDEAGSLPSSSSVSAAPTLQVDLASNDPAAEAARRLAKQ---KAEDEQRK 286
Query: 177 QKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSA 210
Q LP W + ++ EQ +++ ++ SS
Sbjct: 287 QNALPAWHLAS--TVSGEQTALGRRQERLHSSSG 318
>gi|367008690|ref|XP_003678846.1| hypothetical protein TDEL_0A03030 [Torulaspora delbrueckii]
gi|359746503|emb|CCE89635.1| hypothetical protein TDEL_0A03030 [Torulaspora delbrueckii]
Length = 448
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 116/281 (41%), Gaps = 55/281 (19%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKNSAPNGYMCPICSTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + AR
Sbjct: 158 -----EDDSGKKNKEK-QDRLNRLMDQVQPIIDYLKKIDDSRIEE-NTFEIALARLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY--GGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVL 180
+ + N P K S + G D+ + V++ +++D Q+ L
Sbjct: 211 NQSRAAYTYN-PKKGSTMFRPGEDGSSLNNDSSRRAGANSQATLHVNITTQSDEMAQRAL 269
Query: 181 --------------PPWMIKQGMNLTKEQRGEVKQESKMDG-SSATGGLSDDKKSTVEDD 225
P W KQ + K G + ++ + D ++A +S ++ +
Sbjct: 270 QERQVEEKRKQNAVPEWH-KQS-TIGKSALGRLDEDEEFDPRTTAQANMSLEETGAANNQ 327
Query: 226 KASLQDEY-------------------IRAYYAALLKKQQE 247
+ + + Y + YYA+L KKQ E
Sbjct: 328 ETEMDEFYHKHRSLTDRDLEERENERTLNEYYASLAKKQAE 368
>gi|344229321|gb|EGV61207.1| hypothetical protein CANTEDRAFT_116666 [Candida tenuis ATCC 10573]
Length = 410
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 16/127 (12%)
Query: 4 KLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQE 63
K+K E+ YIC C ++++ LDA+ L+S + SF C+NC LV +
Sbjct: 140 KIKQEMNQFGNPHGYICKRCTKKFSQLDAIALLSSDRSSFVCDNCGFSLVED-------- 191
Query: 64 GGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGR 123
D ++ A ++ L+KL + P+++ + ++ D V E T +A A A
Sbjct: 192 --DSNEQASIKQES-----LEKLRTQIDPIIDFLKKI-DESVVEDNTFEAALVNAIPAQS 243
Query: 124 AANGDSS 130
++ G S
Sbjct: 244 SSLGSYS 250
>gi|444323363|ref|XP_004182322.1| hypothetical protein TBLA_0I01440 [Tetrapisispora blattae CBS 6284]
gi|387515369|emb|CCH62803.1| hypothetical protein TBLA_0I01440 [Tetrapisispora blattae CBS 6284]
Length = 479
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 17/139 (12%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C+ +Y L+A++L++ + F C C+ L+
Sbjct: 108 QRLKDDLDKNSAPNGYMCPICETKYTQLEAVQLLNYDRTEFLCSLCDEPLI--------- 158
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L KL ++P+++ + ++ D + E T + AR
Sbjct: 159 -----EDDSGKKNKEK-QDKLNKLMDQVQPIIDSLKKIDDSRIEE-NTFEIALARLIPPQ 211
Query: 123 RAANGDSSSNDPNKSSQGY 141
+ + N P K S +
Sbjct: 212 NQSRAAYTYN-PKKGSTMF 229
>gi|392561655|gb|EIW54836.1| hypothetical protein TRAVEDRAFT_30851 [Trametes versicolor
FP-101664 SS1]
Length = 481
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 27/126 (21%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
L++EL+ K YICP C + + L+ RL + +F+C+ C+ EL+
Sbjct: 118 LRNELDSKG----YICPQCHKSFLPLEVDRLFTPATMTFNCDICSAELI----------- 162
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAW-------EAR 117
DN +D +Q+ ++ ++E + + +D+ +P F + W + R
Sbjct: 163 ----DNENAENVVGSQDRMQRFNRQMRFILEGLRKTEDMVLPAFD-VALWIKNHLAEQER 217
Query: 118 ASAAGR 123
A AA R
Sbjct: 218 AKAASR 223
>gi|449544678|gb|EMD35651.1| hypothetical protein CERSUDRAFT_116392 [Ceriporiopsis subvermispora
B]
Length = 484
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 84/198 (42%), Gaps = 33/198 (16%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MR+++ L + + Y+CP CQ+ ++ LDA +L ++F+C+ C E++ E++
Sbjct: 109 MRRRIDSRLRNELDNKGYVCPQCQKTFSPLDADKLYDPFTNTFNCDICKAEVI-ENENTE 167
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEF--------GTLQ 112
+ G +D +Q+ ++ + E + + +D+ +P F +
Sbjct: 168 SVRGS--------------QDRMQRFNRQMRFIREGLRKTEDMVLPAFDVALWIKKHIID 213
Query: 113 AWEARASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSET 172
+A+A+A G +S + K +G L K E K+ K +
Sbjct: 214 VEKAKAAAQGGGLKIAGASGE-TKQEDAFGIV----LSVDKDEATQRAERDKEAAAKRQ- 267
Query: 173 DSTPQKVLPPWMIKQGMN 190
Q VLP W +K ++
Sbjct: 268 ----QNVLPAWHLKSTIS 281
>gi|425766522|gb|EKV05131.1| Transcription factor TFIIE complex alpha subunit, putative
[Penicillium digitatum Pd1]
gi|425775166|gb|EKV13448.1| Transcription factor TFIIE complex alpha subunit, putative
[Penicillium digitatum PHI26]
Length = 450
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 55/246 (22%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
EYIC C+ + LD L LV D+ F C+NC G ++ ++ + EG D R
Sbjct: 116 MEYICVRCKSEWTELDVLSLVG--DEGFECQNC-GAILERTEDVKGVEGMD------RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWE-------------ARASAAG 122
EK L+ +L+ LK L++QI+ V ++P AW+ RA+ A
Sbjct: 167 HEKNSKLMAQLDNMLK-LLKQIDSV---EIPPNDFETAWDHKVEVIRNQNTHPVRAAIAV 222
Query: 123 RAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGK----QVDVKSETDST-PQ 177
D + PN + +E++ + +E K Q D + + Q
Sbjct: 223 PPKTQDITR--PNAKTDAAA-----------LEISLTSSEEKSAAEQADEAARKAALEKQ 269
Query: 178 KVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQ--DEYIR 235
LP W +N + ++K E G+ L+D ED K S+ D+ +
Sbjct: 270 NALPVWHTHSTVNAAQIGSAQIKTEV---GTLVKPELAD------EDQKPSVDALDDKVA 320
Query: 236 AYYAAL 241
AYYA +
Sbjct: 321 AYYAEM 326
>gi|50292853|ref|XP_448859.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528172|emb|CAG61829.1| unnamed protein product [Candida glabrata]
Length = 466
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
+ +++K++L+ + Y+CP C +Y L+A++L++ E F C C+ L+
Sbjct: 105 LVQRMKEDLDKNSEPNGYMCPICLTKYTQLEAIQLLNYERTEFLCSLCDEPLI------- 157
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + AR
Sbjct: 158 -------EDDSGKKNKEK-QDKLNRLMDQIQPIIDYLKKIDDSRIEE-NTFELALARLIP 208
Query: 121 AGRAANGDSSSNDPNKSSQGY 141
N + N P K S +
Sbjct: 209 PQNQLNAAYTFN-PKKGSTMF 228
>gi|254578098|ref|XP_002495035.1| ZYRO0B01870p [Zygosaccharomyces rouxii]
gi|238937925|emb|CAR26102.1| ZYRO0B01870p [Zygosaccharomyces rouxii]
Length = 457
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+ + + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDFDKNSEPNGYMCPVCLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPE--FGTLQAWEARASA 120
+D++ ++ +EK +D L +L ++P+++ + ++ D + E F A
Sbjct: 158 -----EDDSGKKNKEK-QDRLNRLMDQVQPIIDYLKKIDDSRIEENTFDVALAKLIPPQN 211
Query: 121 AGRAANGDSSSNDPNKSSQGY--GGTPMPFLGDTKVEVAFSGAEGK-QVDVKSETDSTPQ 177
RAA + +P K S + G + LG+ A + ++ V++ + +D Q
Sbjct: 212 QSRAA----YTYNPKKGSTMFRPGDSDGNLLGNDSSRRAGANSQATLHVNITTASDEMAQ 267
Query: 178 KVL 180
K L
Sbjct: 268 KAL 270
>gi|255935683|ref|XP_002558868.1| Pc13g04320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583488|emb|CAP91501.1| Pc13g04320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 444
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 45/247 (18%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EYIC C+ + LD L LVS ++ F C+NC+ L D +G +G D+ +
Sbjct: 116 KEYICLRCKSEWTELDVLSLVS--EEGFECQNCSAILERTED----VKGAEGMDSTGHEK 169
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPN 135
K L+ +L+ LK L++QI+ V ++P AW+ + A + P
Sbjct: 170 NSK---LMAQLDNMLK-LLKQIDAV---EIPPNDFETAWDHKVEVA------RNQHTHPV 216
Query: 136 KSSQGYGGTPMPFLGD------TKVEVAFSGAEGK----QVDVKSETDST-PQKVLPPWM 184
+++ P +E++ + +E K Q D + + Q LP W
Sbjct: 217 RAAIAVPPKPQDITRPNAKTDAAALEISLTSSEEKSAAEQADEAARKAALEKQNALPVWH 276
Query: 185 IKQGMNLTKEQRGEVKQESKMD-GSSATGGLSDDKKSTVEDDKASLQ--DEYIRAYYAAL 241
+N T +V + K D G+ L+D ED K S+ D+ + AYYA
Sbjct: 277 THSTVNTT-----QVGSQIKTDVGTVVKPELAD------EDQKPSVDALDDKVAAYYAE- 324
Query: 242 LKKQQEL 248
+++++EL
Sbjct: 325 MEREKEL 331
>gi|121698282|ref|XP_001267771.1| transcription factor TFIIE complex alpha subunit, putative
[Aspergillus clavatus NRRL 1]
gi|119395913|gb|EAW06345.1| transcription factor TFIIE complex alpha subunit, putative
[Aspergillus clavatus NRRL 1]
Length = 452
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C + LD L L S D+ F C+NC G ++ ++ + EG D R
Sbjct: 116 KEYVCLRCGAEWTELDVLSLYS--DEGFECQNC-GAILERTEDVKGTEGID------RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L++ LK L++QI+ V ++P AW+ +
Sbjct: 167 HEKNSKLMAQLDIMLK-LLKQIDSV---EIPPNDFDTAWDHKV 205
>gi|343424758|emb|CBQ68296.1| related to TFA1-TFIIE subunit (transcription initiation factor), 66
kD [Sporisorium reilianum SRZ2]
Length = 441
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 31/193 (16%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCEN--CNGELVAESDK 58
+RKK+ L + + Y+CP C+ Y+ L+ L+ + + F CE C+ ELV
Sbjct: 125 IRKKIDTRLRNELDNKGYVCPRCKNSYSTLEVAHLLDIFRNVFVCETPGCSTELV----- 179
Query: 59 LAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEAR- 117
DN ++ KD L + L L+ + R + + +P + AW +
Sbjct: 180 ----------DNEEAEDVKRSKDSLMRFNEQLSTLLGGLRRTEGITLPPLD-VGAWLTKH 228
Query: 118 -ASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVA----FSGAEGKQVDVKSET 172
AS A D +S+ P+ S+ G P +V++A + A + K+E
Sbjct: 229 AASQPWFATRSDDASSAPSAST--VNGAPA-----LQVDLASNDPAAEAARRLAKQKAED 281
Query: 173 DSTPQKVLPPWMI 185
+ Q LP W +
Sbjct: 282 EQRKQNALPAWHL 294
>gi|367003777|ref|XP_003686622.1| hypothetical protein TPHA_0G03480 [Tetrapisispora phaffii CBS 4417]
gi|357524923|emb|CCE64188.1| hypothetical protein TPHA_0G03480 [Tetrapisispora phaffii CBS 4417]
Length = 488
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LK++L+ + Y+CP C +Y L+A++L++ + F C C+ L+
Sbjct: 107 QRLKNDLDKNSEPNGYMCPICLTKYTQLEAIQLLNFDRTEFMCSLCDEPLI--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEAR 117
+D++ ++ +EK +D L KL ++P+++ + ++ D + E T + AR
Sbjct: 158 -----EDDSNKKNKEK-QDKLNKLMDQVQPIIDYLKKIDDSRIEE-NTFEIALAR 205
>gi|237837409|ref|XP_002368002.1| hypothetical protein TGME49_031010 [Toxoplasma gondii ME49]
gi|211965666|gb|EEB00862.1| hypothetical protein TGME49_031010 [Toxoplasma gondii ME49]
gi|221509236|gb|EEE34805.1| transcription initiation factor iie, alpha subunit, putative
[Toxoplasma gondii VEG]
Length = 679
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 18 YICPNCQRRYNALDALRL-VSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRR 76
+ CP C +Y+AL+A L V D F C+ C+ +L E K+A Q+
Sbjct: 236 FFCPKCSTKYDALEAQLLDVDPRDAHFLCKFCDEKLEHEDSKVALQQA------------ 283
Query: 77 EKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPNK 136
L Q+ E L+ + + R +++VP F S A R+A+ + +++ K
Sbjct: 284 ---ISLQQRCEKQLQTIRTLVRRGWNMEVPSFPPY-------SRAERSAHRNRPADEAAK 333
Query: 137 SSQGYGGT 144
SS G G T
Sbjct: 334 SSVGAGST 341
>gi|448089808|ref|XP_004196906.1| Piso0_004135 [Millerozyma farinosa CBS 7064]
gi|448094146|ref|XP_004197937.1| Piso0_004135 [Millerozyma farinosa CBS 7064]
gi|359378328|emb|CCE84587.1| Piso0_004135 [Millerozyma farinosa CBS 7064]
gi|359379359|emb|CCE83556.1| Piso0_004135 [Millerozyma farinosa CBS 7064]
Length = 388
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 19/101 (18%)
Query: 4 KLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQE 63
K+K E+ Q Y+CP C ++ + LDA+ L+S + +F C+ C L+
Sbjct: 104 KIKQEMTHYGNPQGYMCPRCGKKVSQLDAISLLSDDKTTFVCDTCGASLIE--------- 154
Query: 64 GGDGDDNARR--RRREKLKDLLQKLEVHLKPLMEQINRVKD 102
DD+ ++ R+EK L++L + + P++ + ++ D
Sbjct: 155 ----DDSGKQASLRQEK----LERLMLQIDPIISYLKKIDD 187
>gi|392579624|gb|EIW72751.1| hypothetical protein TREMEDRAFT_25597 [Tremella mesenterica DSM
1558]
Length = 420
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 51/224 (22%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MR+ + D+++ + V+ Y+C +C R Y+ LD L + + F CE C+ ELV E D
Sbjct: 121 MRRSIDDKVKNEVGVRGYLCTSCGRTYDPLDLGHLFDPQTNVFRCETCSEELV-EHD--P 177
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
+Q+ GD D + + + P+ + + ++ + +P + AW A+
Sbjct: 178 SQDDTTGDK----------VDRMGQFNLATAPIRDALKSLEGMTLPSVNIV-AWMAQ--- 223
Query: 121 AGRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKV- 179
+ S+ P ++++G + KV++ G+ G++ +++E + Q+V
Sbjct: 224 -------NVKSDLPVQATEGRE-------EEKKVQIVL-GSGGERERLEAERAAEAQRVQ 268
Query: 180 --LPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKST 221
LP W +S + G S + GL+ ++K++
Sbjct: 269 TSLPVW----------------HTQSTITGQSTSLGLAAERKAS 296
>gi|392589083|gb|EIW78414.1| hypothetical protein CONPUDRAFT_138702 [Coniophora puteana
RWD-64-598 SS2]
Length = 471
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 20/110 (18%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
L++EL+ K YICP C + Y +L+ +L+ + CE+C+ E++
Sbjct: 115 LRNELDNKG----YICPQCNKSYTSLEVDKLMDFMQNKLVCEDCHAEVI----------- 159
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAW 114
DN + KD +Q+ ++ ++E + + + + +P + AW
Sbjct: 160 ----DNENAENVKGSKDRMQRFNRQIRFIIEGLRKTESMIIPSLD-VPAW 204
>gi|295660200|ref|XP_002790657.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281532|gb|EEH37098.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 440
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 37/244 (15%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C + L+ L + E F C C G + +D++ EGG G D R
Sbjct: 116 KEYVCTTCGAEWTQLEVLSRIGPE--GFECHRC-GATLERADEV---EGGTGAD---RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPN 135
EK L+ +L+ LK L++QI+ +DVPE AWE + + +P
Sbjct: 167 HEKNSKLMAQLDAMLK-LLKQID---SVDVPENDFETAWEHKIDVV------RNQYTNPT 216
Query: 136 KSSQGYGGTPMPFL-GDTK-----VEVAFSGAEGKQVDVKSETDST-----PQKVLPPWM 184
K Y + G +K +EV+ + + K ++E + Q LP W
Sbjct: 217 KPGVAYTSNRQAAVRGVSKTDAASLEVSLTSSAEKSATEQAEEAARKAALEKQNALPVW- 275
Query: 185 IKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQ--DEYIRAYYAALL 242
+ K + G + +++ +G+S +S K E+ KA + D+ + AYYA +
Sbjct: 276 --HTHSTVKTEPGNLPVKTETNGTSV--DVSAVKYELKEERKADVDALDDKVAAYYAEMA 331
Query: 243 KKQQ 246
++++
Sbjct: 332 REKE 335
>gi|358369796|dbj|GAA86409.1| transcription factor TFIIE complex alpha subunit [Aspergillus
kawachii IFO 4308]
Length = 453
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 45/259 (17%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EYIC C + LD L L S ++ F C+NC G ++ ++ + EG D R
Sbjct: 116 KEYICLRCGSEWTELDVLSLYS--EEGFECQNC-GAILERTEDVKGAEGID------RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSND-- 133
EK L+ +L+ LK L++QI+ V ++P AW+ + + +
Sbjct: 167 HEKNSKLMNQLDTMLK-LLKQIDSV---EIPPNDFDTAWDHKIDVVRNQQTHPTRAAVIV 222
Query: 134 PNKSSQGYGGTPMPFLGDTK-----VEVAFSGAEGKQVDVKSETDSTP-----QKVLPPW 183
P+K Q G+TK +E++ + +E K ++ + Q LP W
Sbjct: 223 PSKQQQE------AVRGNTKTDATALEISLTSSEEKSAAEQAAEAARKAAVEKQNALPVW 276
Query: 184 MIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVE--DDKASLQDEYIRAYYAAL 241
++ + +VK E+ +D G +D+K + DDK + AYYA
Sbjct: 277 HTHSTVSTSAAGGPQVKSETDVDIKPEIKGEDEDRKPEINGLDDK-------VAAYYA-- 327
Query: 242 LKKQQELDEAAKNQQESSN 260
+ E ++A + Q+++S+
Sbjct: 328 ---EMEREKALQAQEDASS 343
>gi|303312453|ref|XP_003066238.1| Transcription initiation factor IIE, alpha subunit, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240105900|gb|EER24093.1| Transcription initiation factor IIE, alpha subunit, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|320033683|gb|EFW15630.1| transcription factor TFIIE complex alpha subunit [Coccidioides
posadasii str. Silveira]
Length = 436
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EYIC CQ + L+ L V L D F C+ C G L++ +D++ EGG D R
Sbjct: 116 KEYICLRCQAEWTQLEVLSHVGL--DGFECQRC-GYLLSRADEV---EGGGAAD---RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L+ LK L++QI+ V +VP AW+ +
Sbjct: 167 HEKNSKLMAQLDPMLK-LLKQIDSV---EVPPNDFDTAWDHKV 205
>gi|119192944|ref|XP_001247078.1| hypothetical protein CIMG_00849 [Coccidioides immitis RS]
gi|392863686|gb|EAS35544.2| transcription factor TFIIE complex alpha subunit [Coccidioides
immitis RS]
Length = 436
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EYIC CQ + L+ L V L D F C+ C G L++ +D++ EGG D R
Sbjct: 116 KEYICLRCQAEWTQLEVLSHVGL--DGFECQRC-GYLLSRADEV---EGGGAAD---RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L+ LK L++QI+ V +VP AW+ +
Sbjct: 167 HEKNSKLMAQLDPMLK-LLKQIDSV---EVPPNDFDTAWDHKV 205
>gi|388582347|gb|EIM22652.1| hypothetical protein WALSEDRAFT_59870 [Wallemia sebi CBS 633.66]
Length = 380
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
+RK + D+L + + Y+CP CQ+ + LD L L + D+F C+ CN L ++D+
Sbjct: 111 IRKAIDDKLRNELDQKGYVCPGCQKTFTPLDVLHLEA-TTDTFICDTCNAPL-KDNDESD 168
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEF 108
+G +D++ +L + + ++ + +D+ +P F
Sbjct: 169 GVKGS--------------QDMMARLLMQCRHIIAGLKLTEDMTLPPF 202
>gi|115442994|ref|XP_001218304.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188173|gb|EAU29873.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 439
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EYIC C + LD L L S D+ F C+NC G ++ ++ + EG D R
Sbjct: 116 KEYICLRCGSEWTELDVLSLYS--DEGFECQNC-GAILERTEDVKGAEGID------RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L+ LK L++QI+ V ++P AW+ +
Sbjct: 167 HEKNSKLMAQLDSMLK-LLKQIDSV---EIPPNDFDTAWDHKV 205
>gi|388855892|emb|CCF50467.1| related to TFA1-TFIIE subunit (transcription initiation factor), 66
kD [Ustilago hordei]
Length = 428
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 23/184 (12%)
Query: 4 KLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCEN--CNGELVAESDKLAA 61
+L++EL+ K Y+CP C++ Y+ L+ L+ + + F CE C+ ELV
Sbjct: 132 RLRNELDNKG----YVCPRCKKSYSTLEVAHLLDMFRNLFVCETPGCSTELV-------- 179
Query: 62 QEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAA 121
DN ++ KD L + L L+ + R + + +P + AW + +A+
Sbjct: 180 -------DNEEAEDVKRSKDSLMRFNEQLSTLLGGLRRTEGITLPPLD-VAAWLTKHAAS 231
Query: 122 GRAANGDSSSNDPNKSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVLP 181
S SS G P D + + A + K+E + Q LP
Sbjct: 232 QPWFTTRSEDAASAPSSSTMNGAPA-LQVDLASDDPAAEAARRLAKQKAEEEQRKQNALP 290
Query: 182 PWMI 185
W +
Sbjct: 291 AWHL 294
>gi|395324368|gb|EJF56810.1| hypothetical protein DICSQDRAFT_112614 [Dichomitus squalens
LYAD-421 SS1]
Length = 484
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 19/104 (18%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
L++EL+ K Y+CP C++ + L+ RL + +F+C+ C E+V
Sbjct: 118 LRNELDSKG----YLCPQCRKTFQTLEVDRLFNPALGTFNCDVCGAEVV----------- 162
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEF 108
DN +D +Q+ ++ ++E + R +++ +P F
Sbjct: 163 ----DNENAENVVGSQDRMQRFNRQMRFILEGLRRTEEMVLPAF 202
>gi|71019193|ref|XP_759827.1| hypothetical protein UM03680.1 [Ustilago maydis 521]
gi|46099625|gb|EAK84858.1| hypothetical protein UM03680.1 [Ustilago maydis 521]
Length = 433
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 26/190 (13%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCEN--CNGELVAESDK 58
+RKK+ L + + Y+CP C++ Y+ L+ L+ + + F C+ C+ ELV
Sbjct: 125 IRKKIDTRLRNELDNKGYVCPRCKKSYSTLEVAHLLDMFRNVFVCDTPGCSTELV----- 179
Query: 59 LAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEAR- 117
DN ++ KD L + L L+ + R + + +P + AW +
Sbjct: 180 ----------DNEEAEDVKRSKDSLMRFNEQLSTLLGGLRRTEGITLPPLD-VGAWLTKH 228
Query: 118 -ASAAGRAANGDSSSNDPNKSSQGYGGTPMPFLG-DTKVEVAFSGAEGKQVDVKSETDST 175
AS AA + +S+ P + G + D E A A KQ K+E +
Sbjct: 229 AASQPWFAARSEDASSAPPSTVNGAPALQVDLASNDPAAEAARRLA--KQ---KAEDEQR 283
Query: 176 PQKVLPPWMI 185
Q LP W +
Sbjct: 284 KQNALPAWHL 293
>gi|126275543|ref|XP_001387097.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126212966|gb|EAZ63074.1| large subunit of transcription factor tfIIE [Scheffersomyces
stipitis CBS 6054]
Length = 391
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 23/125 (18%)
Query: 4 KLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQE 63
+LK E+ Q Y CP C ++ + LDA+ L+S + F C+ C G LV
Sbjct: 112 QLKQEMSHFGNPQGYACPRCGKKVSQLDAISLLSEDKTEFLCDVCGGTLVE--------- 162
Query: 64 GGDGDDNARR--RRREKLKDLLQKLEVHLKPLMEQINRVKDLDVP----EFGTLQAWEAR 117
DD++++ R+EK L+KL + P++ + ++ + ++ E +QA A+
Sbjct: 163 ----DDSSQQATLRQEK----LEKLMFQVDPIINYLKKIDESNIQDNDFETALIQAIPAQ 214
Query: 118 ASAAG 122
+++
Sbjct: 215 STSTA 219
>gi|258574225|ref|XP_002541294.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901560|gb|EEP75961.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 435
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C+ + L+ L V D F C+ C G L++ +D++ EGG G D +
Sbjct: 116 KEYVCLRCKAEWTQLEVLSHVG--PDGFECQRC-GNLLSRTDEV---EGGSGSDRTGHEK 169
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
KL L P+++ + ++ ++VP AW+ +
Sbjct: 170 NSKLM-------AQLDPMLKLLKQIDSVEVPPNDFETAWDHKV 205
>gi|325088486|gb|EGC41796.1| transcription factor spTFIIE alpha subunit [Ajellomyces capsulatus
H88]
Length = 424
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 51/242 (21%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C + L+ L + D F C C G + +D++ EGG G D R
Sbjct: 116 KEYVCTRCGAEWTQLEVLSRIG--PDGFECHRC-GATLERADEV---EGGTGAD---RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPN 135
EK L+ +L+ LK L++QI+ +DVPE AWE + D N
Sbjct: 167 HEKNSKLMAQLDKMLK-LLKQID---SVDVPENDFETAWEHKV---------DVIRNQ-- 211
Query: 136 KSSQGYGGTPMPFLGDTKVEVAFSGAEGKQVDVKSETDSTP-----------QKVLPPWM 184
+ T+ VA++ V S+TD++ Q LP W
Sbjct: 212 ------------YTNPTRPGVAYTSNRQAAVRGISKTDASSLEAARKAALEKQNALPVW- 258
Query: 185 IKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYAALLKK 244
+ K + G + + + +G + + + K + D +L D+ + AYYA + ++
Sbjct: 259 --HTHSTVKSEPGNLPVKHEPNGITDVFAIKSEVKEEQKPDIDALDDK-VAAYYAEMARE 315
Query: 245 QQ 246
++
Sbjct: 316 KE 317
>gi|328857844|gb|EGG06959.1| hypothetical protein MELLADRAFT_106301 [Melampsora larici-populina
98AG31]
Length = 478
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 17/101 (16%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
Q Y+CP C+ Y+ LD + +++ SF CE CN L DDN
Sbjct: 150 QGYVCPRCKTTYSTLD-ISGLAMTATSFLCEICNTPL---------------DDNDNDIE 193
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEA 116
+K KD +Q+L + + + + + VP F Q W A
Sbjct: 194 VQKNKDRMQRLNSQSTLIKKTLQKADKVTVPAFDIAQ-WVA 233
>gi|299742125|ref|XP_001832273.2| transcription initiation factor TFIIE alpha subunit [Coprinopsis
cinerea okayama7#130]
gi|298405041|gb|EAU89646.2| transcription initiation factor TFIIE alpha subunit [Coprinopsis
cinerea okayama7#130]
Length = 518
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MR K+ +L + + YICP C++ + L+A +L+ F C+ C+ ELV
Sbjct: 107 MRHKIDHKLRNEIDNKGYICPQCKQSFTPLEADKLMDFSRGIFACDICHHELV------- 159
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEF 108
DN + KD + + ++ + E + + + + +P+F
Sbjct: 160 --------DNENSASVQGSKDRMMRFNHQMRFIREGLQKSEAMKLPKF 199
>gi|225678875|gb|EEH17159.1| transcription initiation factor IIE subunit alpha [Paracoccidioides
brasiliensis Pb03]
Length = 432
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C + L+ L + E F C C G + +D++ EGG G D R
Sbjct: 108 KEYVCTTCGAEWTQLEVLSRIGPE--GFECHRC-GATLERADEV---EGGTGAD---RTG 158
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L+ LK L++QI+ +DVPE AWE +
Sbjct: 159 HEKNSKLMAQLDAMLK-LLKQID---SVDVPENDFETAWEHKV 197
>gi|344300680|gb|EGW31001.1| hypothetical protein SPAPADRAFT_62898 [Spathaspora passalidarum
NRRL Y-27907]
Length = 390
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 64/124 (51%), Gaps = 23/124 (18%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
LK E+ Q Y+CP C ++ + +DA+ L+S + F C+ C G L+
Sbjct: 105 LKQEMSTFGNPQGYVCPRCGKKVSQIDAISLLSEDKTEFVCDVCQGILIE---------- 154
Query: 65 GDGDDNARR--RRREKLKDLLQKLEVHLKPLMEQINRVKDLDVP----EFGTLQAWEARA 118
DD++++ ++EKL+ L+++++ P+++ + + D ++ E +Q+ A++
Sbjct: 155 ---DDSSQQATLKQEKLEKLMKQVD----PIIKYLKIIDDSNIQDNDFESALIQSIPAQS 207
Query: 119 SAAG 122
S+
Sbjct: 208 SSTA 211
>gi|226293712|gb|EEH49132.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 440
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C + L+ L + E F C C G + +D++ EGG G D R
Sbjct: 116 KEYVCTTCGAEWTQLEVLSRIGPE--GFECHRC-GATLERADEV---EGGTGAD---RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L+ LK L++QI+ +DVPE AWE +
Sbjct: 167 HEKNSKLMAQLDAMLK-LLKQID---SVDVPENDFETAWEHKV 205
>gi|71000996|ref|XP_755179.1| transcription factor TFIIE complex alpha subunit [Aspergillus
fumigatus Af293]
gi|66852817|gb|EAL93141.1| transcription factor TFIIE complex alpha subunit, putative
[Aspergillus fumigatus Af293]
gi|159129270|gb|EDP54384.1| transcription factor TFIIE complex alpha subunit, putative
[Aspergillus fumigatus A1163]
Length = 440
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C + LD L L S D+ F C+NC G ++ ++ + EG D R
Sbjct: 116 KEYVCLRCGAEWTELDVLSLYS--DEGFECQNC-GAILERTEDVKGAEGID------RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L+ LK L++QI+ V ++P AW+ +
Sbjct: 167 HEKNSKLMAQLDNMLK-LLKQIDSV---EIPPNDFETAWQHKV 205
>gi|119480649|ref|XP_001260353.1| transcription factor TFIIE complex alpha subunit, putative
[Neosartorya fischeri NRRL 181]
gi|119408507|gb|EAW18456.1| transcription factor TFIIE complex alpha subunit, putative
[Neosartorya fischeri NRRL 181]
Length = 440
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C + LD L L S D+ F C+NC G ++ ++ + EG D R
Sbjct: 116 KEYVCLRCGAEWTELDVLSLYS--DEGFECQNC-GAILERTEDVKGAEGID------RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L+ LK L++QI+ V ++P AW+ +
Sbjct: 167 HEKNSKLMAQLDNMLK-LLKQIDSV---EIPPNDFETAWQHKV 205
>gi|241949699|ref|XP_002417572.1| transcription factor a large subunit, putative; transcription
initiation factor IIe alpha subunit, putative [Candida
dubliniensis CD36]
gi|223640910|emb|CAX45227.1| transcription factor a large subunit, putative [Candida
dubliniensis CD36]
Length = 394
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
LK E+ Q Y+CP C + + LDA+ ++S + F C+ C G L+ + A
Sbjct: 105 LKQEMSSFGNPQGYVCPRCGNKVSQLDAISMLSEDKTEFICDVCQGVLIEDDSSQQA--- 161
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
++ R EKL L + LK + E +++D D E LQA A+++A
Sbjct: 162 -----TLKQERLEKLMKQLDPIIKFLKIIDE--TQIRDNDF-ESALLQAIPAQSAATA 211
>gi|154274159|ref|XP_001537931.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415539|gb|EDN10892.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 441
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C + L+ L + D F C C G + +D++ EGG G D R
Sbjct: 116 KEYVCTRCGAEWTQLEVLSRIG--PDGFECHRC-GATLERADEV---EGGTGAD---RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L+ LK L++QI+ +DVPE AWE +
Sbjct: 167 HEKNSKLMAQLDKMLK-LLKQID---SVDVPENDFETAWEHKV 205
>gi|225559413|gb|EEH07696.1| transcription factor spTFIIE alpha subunit [Ajellomyces capsulatus
G186AR]
Length = 441
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C + L+ L + D F C C G + +D++ EGG G D R
Sbjct: 116 KEYVCTRCGAEWTQLEVLSRIG--PDGFECHRC-GATLERADEV---EGGTGAD---RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L+ LK L++QI+ +DVPE AWE +
Sbjct: 167 HEKNSKLMAQLDKMLK-LLKQID---SVDVPENDFETAWEHKV 205
>gi|430811911|emb|CCJ30617.1| unnamed protein product [Pneumocystis jirovecii]
Length = 332
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52
YICP C R+Y +LDA+ LVS + SF C +C L
Sbjct: 123 YICPTCLRQYTSLDAVSLVSPDWMSFLCIDCGTAL 157
>gi|323336730|gb|EGA77994.1| Tfa1p [Saccharomyces cerevisiae Vin13]
Length = 360
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 57/269 (21%)
Query: 19 ICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRREK 78
+CP C +Y L+A++L++ + F C C+ LV +D++ ++ +EK
Sbjct: 1 MCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------------EDDSGKKNKEK 46
Query: 79 LKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPNKSS 138
+D L +L ++P+++ + ++ D + E T + AR ++ + N P K S
Sbjct: 47 -QDKLNRLMDQIQPIIDSLKKIDDSRIEE-NTFEIALARLIPPQNQSHAAYTYN-PKKGS 103
Query: 139 QGY---GGTPMPFLGDTKV---EVAFSGAEGK---QVDVKSETDSTPQKVL--------- 180
+ P+P L T + +GA + +++ + +D Q+ L
Sbjct: 104 TMFRPGDSAPLPNLMGTALGNDSSRRAGAXSQATLHINITTASDEVAQRELQERQAEEKR 163
Query: 181 -----PPWMIKQGMNLTKEQRGEVKQESKMD---GSSATGGLSDD------------KKS 220
P W KQ + K G + E + D +SA ++ D +
Sbjct: 164 KQNAVPEWH-KQST-IGKTALGRLDNEEEFDPVVTASAMDSINPDNEPAQETSYQNNRTL 221
Query: 221 TVEDDKASLQDEYIRAYYAALLKKQQELD 249
T ++ + ++ + YYAAL KKQ +L+
Sbjct: 222 TEQEMEERENEKTLNDYYAALAKKQAKLN 250
>gi|430811914|emb|CCJ30620.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 372
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52
YICP C R+Y +LDA+ LVS + SF C +C L
Sbjct: 123 YICPTCLRQYTSLDAVSLVSPDWMSFLCIDCGTAL 157
>gi|240282352|gb|EER45855.1| transcription factor spTFIIE alpha subunit [Ajellomyces capsulatus
H143]
Length = 446
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C + L+ L + D F C C G + +D++ EGG G D R
Sbjct: 121 KEYVCTRCGAEWTQLEVLSRIG--PDGFECHRC-GATLERADEV---EGGTGAD---RTG 171
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L+ LK L++QI+ +DVPE AWE +
Sbjct: 172 HEKNSKLMAQLDKMLK-LLKQID---SVDVPENDFETAWEHKV 210
>gi|409048186|gb|EKM57664.1| hypothetical protein PHACADRAFT_251430 [Phanerochaete carnosa
HHB-10118-sp]
Length = 491
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MR+++ L + + YIC CQ+ ++ L+ +L+ +F C+ C+ ELV
Sbjct: 110 MRRRIDSTLRNELDNKGYICSQCQKLFSPLEVDKLMDFAAGTFICDICHAELV------- 162
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
++NA R +D +Q+ ++ + E + + +D+ +P F + W +
Sbjct: 163 ------DNENAESVRGS--QDRMQRFNRQMRFIREGLRKTEDMVLPAFD-VAVWIKKNIE 213
Query: 121 AGRA 124
A RA
Sbjct: 214 AERA 217
>gi|68464919|ref|XP_723537.1| hypothetical protein CaO19.4851 [Candida albicans SC5314]
gi|68465296|ref|XP_723347.1| hypothetical protein CaO19.12314 [Candida albicans SC5314]
gi|46445374|gb|EAL04643.1| hypothetical protein CaO19.12314 [Candida albicans SC5314]
gi|46445571|gb|EAL04839.1| hypothetical protein CaO19.4851 [Candida albicans SC5314]
gi|238878603|gb|EEQ42241.1| hypothetical protein CAWG_00445 [Candida albicans WO-1]
Length = 394
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
LK E+ Q Y+CP C + + LDA+ ++S + F C+ C G L+ + A
Sbjct: 105 LKQEMSSFGNPQGYVCPRCGNKVSQLDAISMLSEDKTEFICDVCQGVLIEDDSSQQA--- 161
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
++ R EKL L + LK + E +++D D E LQA A+++
Sbjct: 162 -----TLKQERLEKLMKQLDPIIKFLKIIDE--TQIRDNDF-ESALLQAIPAQSATTA 211
>gi|255728303|ref|XP_002549077.1| hypothetical protein CTRG_03374 [Candida tropicalis MYA-3404]
gi|240133393|gb|EER32949.1| hypothetical protein CTRG_03374 [Candida tropicalis MYA-3404]
Length = 381
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 4 KLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQE 63
+LK E+ Q Y+CP C + + LDA+ ++S + F C+ C G LV + A
Sbjct: 104 QLKQEMSSFGNPQGYVCPRCGNKVSQLDAISMLSEDKTEFICDVCQGVLVEDDSSQQA-- 161
Query: 64 GGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGR 123
++ R EKL + + LK + E ++D D E LQA A+ SA
Sbjct: 162 ------TLKQERLEKLMKQVDPIIKFLKIIDE--THIQDNDF-ETALLQAIPAQ-SATTA 211
Query: 124 AANGDSSSNDPNKSSQGYGGTPM 146
+ + +N + + Q T +
Sbjct: 212 SYTVSNRANYKSSAPQSMNATTL 234
>gi|145246394|ref|XP_001395446.1| transcription factor TFIIE complex alpha subunit [Aspergillus niger
CBS 513.88]
gi|134080162|emb|CAK46142.1| unnamed protein product [Aspergillus niger]
gi|350636806|gb|EHA25164.1| transcription initiation factor TFIIE, alpha subunit [Aspergillus
niger ATCC 1015]
Length = 453
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 45/259 (17%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EYIC C + LD L L S ++ F C+NC G ++ ++ + EG D R
Sbjct: 116 KEYICLRCGSEWTELDVLSLYS--EEGFECQNC-GAILERTEDVKGAEGID------RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSND-- 133
EK L+ +L+ LK L++QI+ V ++P AW+ + + +
Sbjct: 167 HEKNSKLMNQLDTMLK-LLKQIDSV---EIPPNDFDTAWDHKIDVVRNQQTHPTRAAVIV 222
Query: 134 PNKSSQGYGGTPMPFLGDTK-----VEVAFSGAEGKQVDVKSETDSTP-----QKVLPPW 183
P+K Q G+TK +E++ + +E K ++ + Q LP W
Sbjct: 223 PSKQQQE------AVRGNTKTDATALEISLTSSEEKSAAEQAAEAARKAAVEKQNALPVW 276
Query: 184 MIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVE--DDKASLQDEYIRAYYAAL 241
++ + VK E+ +D +D+K + DDK + AYYA
Sbjct: 277 HTHSTVSTSAGNGPHVKSETDIDIKPEIKPEDEDRKPEINGLDDK-------VAAYYA-- 327
Query: 242 LKKQQELDEAAKNQQESSN 260
+ E ++A + Q+++S+
Sbjct: 328 ---EMEREKALQAQEDASS 343
>gi|288560619|ref|YP_003424105.1| hypothetical protein mru_1363 [Methanobrevibacter ruminantium M1]
gi|288543329|gb|ADC47213.1| hypothetical protein mru_1363 [Methanobrevibacter ruminantium M1]
Length = 139
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 15 VQEYICPNCQRRYNALDALRL-----VSLEDDSFHCENCNGELVAESDKLAAQEGGDGDD 69
+ E+ICP+C + L +R V+L+DD+ C+NC L + SD++ QE
Sbjct: 50 INEFICPSCGNKIEELKIIRTCPNCGVNLDDDAVFCDNCGANLSSTSDQI--QEFNKSLI 107
Query: 70 NARRRRREKLKDLLQKLEVHLKPLMEQINR 99
+ + +++ DLL K + L +
Sbjct: 108 ESNKSLMDQIADLLTKFGKFIDDLFSSFKK 137
>gi|390598809|gb|EIN08206.1| transcription initiation factor TFIIE alpha subunit [Punctularia
strigosozonata HHB-11173 SS5]
Length = 512
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 20/102 (19%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
L++EL+ K YIC C + + +DA +L+ F C++C GEL+ E+D+
Sbjct: 116 LRNELDQKG----YICNQCSKPFTTIDAAKLMDFSRGCFVCDDCQGELI-ENDR-----N 165
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVP 106
G D + DL+Q+ + + E + + + + +P
Sbjct: 166 GSSDTS----------DLMQRFNAAMFHIREGLRKTESMVLP 197
>gi|115484071|ref|NP_001065697.1| Os11g0137500 [Oryza sativa Japonica Group]
gi|108863969|gb|ABA91358.2| transcription initiation factor IIE, alpha subunit, putative,
expressed [Oryza sativa Japonica Group]
gi|113644401|dbj|BAF27542.1| Os11g0137500 [Oryza sativa Japonica Group]
gi|215697758|dbj|BAG91752.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 170
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRR 26
M+KKLKDEL+ +Q Y+CPNC+RR
Sbjct: 145 MKKKLKDELDGNYMIQNYVCPNCERR 170
>gi|406697537|gb|EKD00796.1| transcription initiation factor TFIIE alpha subunit [Trichosporon
asahii var. asahii CBS 8904]
Length = 384
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRK + ++L+ + + Y+C NC + Y+ L+ + F CE C GELV +
Sbjct: 106 MRKAIDEKLKQEVGKRGYVCSNCGKGYDPLEISNTFDPRTNLFLCELCGGELVEDD---P 162
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEAR 117
+ DG A D +Q+ + P+ + + +++ +P + AW A+
Sbjct: 163 STHTADGQAAA--------GDQMQRFNLATAPIRDALKQIEGQRLPTINMV-AWIAK 210
>gi|331217185|ref|XP_003321271.1| hypothetical protein PGTG_02313 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300261|gb|EFP76852.1| hypothetical protein PGTG_02313 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 484
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 16/93 (17%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
Q Y+CP C++ Y+ LD + +S+ SF CE C L +DN
Sbjct: 150 QGYVCPRCKKTYSTLD-ISGLSMTATSFLCEICGTPL---------------NDNENDIE 193
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEF 108
+K KD +Q+L + + + + + +P F
Sbjct: 194 VQKNKDRMQRLNSQTMTIKKNLQKADQIVIPPF 226
>gi|401885956|gb|EJT50035.1| transcription initiation factor TFIIE alpha subunit [Trichosporon
asahii var. asahii CBS 2479]
Length = 384
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRK + ++L+ + + Y+C NC + Y+ L+ + F CE C GELV +
Sbjct: 106 MRKAIDEKLKQEVGKRGYVCSNCGKGYDPLEISNTFDPRTNLFLCELCGGELVEDD---P 162
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEAR 117
+ DG A D +Q+ + P+ + + +++ +P + AW A+
Sbjct: 163 STHTADGQAAA--------GDQMQRFNLATAPIRDALKQIEGQRLPTINMV-AWIAK 210
>gi|261190140|ref|XP_002621480.1| transcription factor TFIIE complex alpha subunit [Ajellomyces
dermatitidis SLH14081]
gi|239591308|gb|EEQ73889.1| transcription factor TFIIE complex alpha subunit [Ajellomyces
dermatitidis SLH14081]
Length = 441
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C + L+ L + E F C C G + +D++ EGG G D R
Sbjct: 116 KEYVCIRCGAEWTQLEVLSRIGPE--GFECHRC-GATLERADEV---EGGAGAD---RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L+ LK L++QI+ +DVPE AWE +
Sbjct: 167 HEKNSKLMAQLDKMLK-LLKQID---SVDVPENDFETAWEHKV 205
>gi|239606368|gb|EEQ83355.1| transcription factor TFIIE complex alpha subunit [Ajellomyces
dermatitidis ER-3]
gi|327353056|gb|EGE81913.1| transcription factor spTFIIE alpha subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 441
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C + L+ L + E F C C G + +D++ EGG G D R
Sbjct: 116 KEYVCIRCGAEWTQLEVLSRIGPE--GFECHRC-GATLERADEV---EGGAGAD---RTG 166
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARA 118
EK L+ +L+ LK L++QI+ +DVPE AWE +
Sbjct: 167 HEKNSKLMAQLDKMLK-LLKQID---SVDVPENDFETAWEHKV 205
>gi|209878075|ref|XP_002140479.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209556085|gb|EEA06130.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 456
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 14 TVQEYICPNCQRRYNALDALRL-VSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNAR 72
++ E +C C +Y +LDAL L +S +D F C CN +L + GD
Sbjct: 166 SLDELVCKICNVKYTSLDALGLELSQDDGFFLCRYCNEKL----------QSGDSAS--- 212
Query: 73 RRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQ 112
R+ +D ++ L+ L + RVK++ +P F Q
Sbjct: 213 --FRQATRDKAERTRSQLQVLYNSLERVKNMYIPIFPLYQ 250
>gi|393232008|gb|EJD39595.1| hypothetical protein AURDEDRAFT_116120 [Auricularia delicata
TFB-10046 SS5]
Length = 489
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53
KKL++EL+ K YICP C Y L+A +L+ + C C E+V
Sbjct: 117 KKLRNELDNKG----YICPRCSHCYTPLEADQLLDFATQTLRCLICQHEVV 163
>gi|393212166|gb|EJC97668.1| hypothetical protein FOMMEDRAFT_115230 [Fomitiporia mediterranea
MF3/22]
Length = 522
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENC 48
L++EL+ K YICPNC+ + L+ RL+ + +F C+ C
Sbjct: 115 LRNELDNKG----YICPNCKATFQPLEVDRLMDFQRGAFLCDQC 154
>gi|221488743|gb|EEE26957.1| transcription initiation factor iie, alpha subunit, putative
[Toxoplasma gondii GT1]
Length = 688
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 31/136 (22%)
Query: 18 YICPNCQRRYNALDALRL-VSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRR 76
+ CP C +Y+AL+A L V D F C+ C+ +L E K+A Q+
Sbjct: 236 FFCPKCSTKYDALEAQLLDVDPRDAHFLCKFCDEKLEHEDSKVALQQA------------ 283
Query: 77 EKLKDLLQKLEVHLKPLMEQINR--------VKDLDVPEFGTLQAWEARASAAGRAANGD 128
L Q+ E L+ + + R + L VP F S A R+A+ +
Sbjct: 284 ---ISLQQRCEKQLQTIRTLVRRGWNMEASFLYFLQVPSFPPY-------SRAERSAHRN 333
Query: 129 SSSNDPNKSSQGYGGT 144
+++ KSS G G T
Sbjct: 334 RPADEAAKSSVGAGST 349
>gi|156837470|ref|XP_001642760.1| hypothetical protein Kpol_348p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156113325|gb|EDO14902.1| hypothetical protein Kpol_348p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 506
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 120/289 (41%), Gaps = 62/289 (21%)
Query: 3 KKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQ 62
++LKD+L+ + Y+CP C +Y L+A++L++ + F C C+ LV
Sbjct: 107 QRLKDDLDKFSEPNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------- 157
Query: 63 EGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAG 122
+D++ ++ +EK +D L +L ++P+++ + ++ D + E T + A+
Sbjct: 158 -----EDDSGKKNKEK-QDRLNRLMDQVQPIIDYLKKIDDSRIEE-NTFEISLAKLIPPQ 210
Query: 123 RAANGDSSSNDPNKSSQGY--GGTPM-----PFLGDTKVEVAFSGAEGK-QVDVKSETDS 174
+ + N P K S + G P+ LG+ A + ++ +++ + +D
Sbjct: 211 NQSKAAYTFN-PKKGSTMFRPGDAPLANVMGTALGNDSSRRAGANSQATLHINITTASDE 269
Query: 175 TPQKVL--------------PPWMIKQGMNLTKEQRGEVKQESKMD-------------- 206
Q+ L P W KQ + K G + ++ + D
Sbjct: 270 VVQRELQERKAEEKRKQNAVPEWH-KQS-TIGKADLGRLDEDEEFDPRTTAYAAQSLEES 327
Query: 207 -----GSSATGG--LSDDKKSTVEDDKASLQDEYIRAYYAALLKKQQEL 248
G++A G + T ++ + + + YYA L KKQ ++
Sbjct: 328 NGGMFGNNANGSNTYQHHRVLTEQELEERENERTLNEYYATLAKKQAQM 376
>gi|346322989|gb|EGX92587.1| cohesin complex subunit (Psm1), putative [Cordyceps militaris CM01]
Length = 2364
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 33/179 (18%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+EY+C C+ ++ L+ L S + F C C L E+D+ A G + + R
Sbjct: 1475 KEYVCSFCKAEWSPLEVLD--SHGPNGFLCHRCGHVLAFEADRNAG-----GHEQSTR-- 1525
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPN 135
L K + E + R+ ++ +PE +A A+A R A ++ P
Sbjct: 1526 ----------LNDQFKFISELLQRIDNVHIPECDFDRAL-AKARPVVRDATHQVAATMPM 1574
Query: 136 KSSQGYGGTPMPF-----LGDTKVEVAFSGAEG-----KQVDVKSETDSTPQKVLPPWM 184
SS PM G + V S EG K+ ++ Q LP WM
Sbjct: 1575 DSSM---NRPMAVKGLANTGPQSISVNISTVEGASEAEKEAEIARREKLAAQNALPAWM 1630
>gi|308464067|ref|XP_003094303.1| hypothetical protein CRE_12281 [Caenorhabditis remanei]
gi|308247949|gb|EFO91901.1| hypothetical protein CRE_12281 [Caenorhabditis remanei]
Length = 439
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAE 55
MR+KL+ + Y C CQ Y+ LD R++ +E C C+GE++A+
Sbjct: 124 MRQKLESREQMDTNRAHYKCNACQSTYDTLDITRILDIETGRLVCWRCHGEVLAD 178
>gi|281202707|gb|EFA76909.1| transcription factor IIE [Polysphondylium pallidum PN500]
Length = 454
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
+R+KL ++ K +Q Y C NC + + A D RL++ + + C+ C G
Sbjct: 105 IRQKLDEQKAKKLDLQSYRCTNCSKMFTAYDIPRLLNPMEGTLECDTCGG---------L 155
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASA 120
QE + + +R ++ V +K +++Q+ + L +P F A + +A+
Sbjct: 156 PQEVINAE--TQRANTDQF--------VQIKKIIDQLKKTDGLQIPLFARDLADDTQAAG 205
Query: 121 AGRAANGDSS 130
N +++
Sbjct: 206 PSLTINSNTN 215
>gi|291000108|ref|XP_002682621.1| hypothetical protein NAEGRDRAFT_61798 [Naegleria gruberi]
gi|284096249|gb|EFC49877.1| hypothetical protein NAEGRDRAFT_61798 [Naegleria gruberi]
Length = 459
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 9 LECKNTVQ---EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKL-AAQEG 64
LE K VQ Y C C Y A D RL+ + C+ C G++ + L +E
Sbjct: 119 LEVKKKVQADPTYTCTVCDEEYEAYDVTRLLDFATGTLICQTCGGQVDESRESLEKHEET 178
Query: 65 GDGDDNARRRRREKLKDLLQKL 86
G D+ R +L+ +++KL
Sbjct: 179 ISGSDSLEVRYNNQLQLIIEKL 200
>gi|401826867|ref|XP_003887526.1| transcription initiation factor IIE subunit alpha [Encephalitozoon
hellem ATCC 50504]
gi|392998532|gb|AFM98545.1| transcription initiation factor IIE subunit alpha [Encephalitozoon
hellem ATCC 50504]
Length = 288
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53
Y+C C R Y++LDA L +E+ F CE+C G+LV
Sbjct: 119 YMCMECGREYSSLDAQSL--MENYVFKCEDCKGDLV 152
>gi|426195399|gb|EKV45329.1| hypothetical protein AGABI2DRAFT_208287 [Agaricus bisporus var.
bisporus H97]
Length = 534
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
L++EL+ K Y+C C++ Y+ LD +L+ CE C+ E+V
Sbjct: 115 LRNELDNKG----YVCTLCKQSYSPLDVDKLMDFSRGIMVCEICHAEVV----------- 159
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAW 114
DN + KD +++ L+ + E + + + + +P F + AW
Sbjct: 160 ----DNENAESVQGSKDRMKRFHHQLRFIKEGLQKSEAMVLPAF-DVAAW 204
>gi|409077055|gb|EKM77423.1| hypothetical protein AGABI1DRAFT_130505 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 533
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 5 LKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEG 64
L++EL+ K Y+C C++ Y+ LD +L+ CE C+ E+V
Sbjct: 115 LRNELDNKG----YVCTLCKQSYSPLDVDKLMDFSRGIMVCEICHAEVV----------- 159
Query: 65 GDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAW 114
DN + KD +++ L+ + E + + + + +P F + AW
Sbjct: 160 ----DNENAESVQGSKDRMKRFHHQLRFIKEGLQKSEAMVLPAF-DVAAW 204
>gi|68070539|ref|XP_677181.1| transcription initiation factor iie, alpha subunit, [Plasmodium
berghei strain ANKA]
gi|56497195|emb|CAH96054.1| transcription initiation factor iie, alpha subunit, putative
[Plasmodium berghei]
Length = 381
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 35/264 (13%)
Query: 12 KNTVQEYICPNCQRRYNALDALRLVSLE--DDSFHCENCNGEL-VAESDKLAAQEGGDGD 68
KN YIC C Y+ LDA +++ L+ D F C CN ++ + E D ++ ++
Sbjct: 119 KNECDVYICKFCNATYSQLDA-QILPLDPYDAHFLCF-CNNKIELIEKDDVSTEKMY--- 173
Query: 69 DNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGD 128
N + LK+ ++KL+ + PL + + + + ++ S+ G N
Sbjct: 174 -NKYTKYLNILKEHIEKLKNYFIPLYTE-----KFNTNKLNSANSYVTDISSDGSVTNNS 227
Query: 129 SSSNDPNKSSQ-GYGGTPMPFLGDTKVEVAFSGAEGKQVDV-KSETDSTPQKVLPPWMIK 186
S + N SS T + + + VE + Q DV S T +K IK
Sbjct: 228 SEISQTNNSSLLSQSNTMIDIINNRIVENERKKKDEIQPDVCNSSIIRTDKK------IK 281
Query: 187 QGMNLTKEQRGEVKQESKMDGSSATGGLSDDKK---STVED--------DKASLQDEYIR 235
MN+ + + ++K+ D T ++D+K+ + D DK L++ I
Sbjct: 282 ICMNM--KGKNDLKETQNNDHIKLTNTVNDEKREKNKIINDIKNKNNSNDKHELEEPEIP 339
Query: 236 AYYAALLKKQQELDEAAKNQQESS 259
++ K+ L EA K QQ+ S
Sbjct: 340 LFFIQKFNKKFTLIEAQKLQQDMS 363
>gi|303389817|ref|XP_003073140.1| transcription initiation factor TFIIE subunit alpha
[Encephalitozoon intestinalis ATCC 50506]
gi|303302285|gb|ADM11780.1| transcription initiation factor TFIIE subunit alpha
[Encephalitozoon intestinalis ATCC 50506]
Length = 290
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52
YIC C R Y++LDA L +E+ F CE+C G+L
Sbjct: 119 YICMECGREYSSLDAQSL--MENYVFKCEDCKGDL 151
>gi|194746810|ref|XP_001955847.1| GF24895 [Drosophila ananassae]
gi|190623129|gb|EDV38653.1| GF24895 [Drosophila ananassae]
Length = 1098
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 20/84 (23%)
Query: 2 RKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDS----FHCENCNGELVAESD 57
RK L++ L CK ++ CP CQ + + +LRL L+ FHCE CN E
Sbjct: 921 RKTLREHL-CKERNEQLECPECQHVFGSKSSLRL-HLQSHQARKRFHCEECNYE------ 972
Query: 58 KLAAQEGGDGDDNARRRRREKLKD 81
D NA RR KD
Sbjct: 973 --------ASDHNAFRRHLATHKD 988
>gi|300708115|ref|XP_002996244.1| hypothetical protein NCER_100681 [Nosema ceranae BRL01]
gi|239605528|gb|EEQ82573.1| hypothetical protein NCER_100681 [Nosema ceranae BRL01]
Length = 288
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 12 KNTVQE-YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53
KN+++E Y C C +++++LDA +++ + F C++CNGELV
Sbjct: 112 KNSIKEGYYCTACDKQFSSLDAQIIMT--NYIFKCDDCNGELV 152
>gi|378731323|gb|EHY57782.1| transcription initiation factor TFIIE alpha subunit [Exophiala
dermatitidis NIH/UT8656]
Length = 483
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 17/100 (17%)
Query: 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRR 75
+++ CP C+ Y L+ L + D+ F+C+ C LV ++ AAQ+ G N + R
Sbjct: 118 KDWRCPRCKAEYEELEILDKIG--DEGFYCDRCGATLV--QNERAAQDRG----NHEKIR 169
Query: 76 REKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWE 115
R L D L+K + + I ++ DVP+ AWE
Sbjct: 170 R--LNDQLKKFD-------DMILKIDRKDVPQNDFESAWE 200
>gi|322695659|gb|EFY87463.1| transcription factor spTFIIE alpha subunit [Metarhizium acridum
CQMa 102]
Length = 437
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 87/226 (38%), Gaps = 49/226 (21%)
Query: 13 NTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNAR 72
N +EY C C+ + A++ L S+ + F C C+ L E+D+ + G + +
Sbjct: 121 NEKKEYFCSFCKAEWTAMEVLD--SVGPNGFLCHRCHHTLTFEADRTST-----GHEQST 173
Query: 73 RRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSN 132
R L K + E + ++ + +PE +A A+A R A ++
Sbjct: 174 R------------LNDQFKFISELLPKIDAVHIPECDFDRAL-AKARPVVRDATHQRAAT 220
Query: 133 DPNKSSQGYGGTPMPFLGDTK-----VEVAFSGAEGKQVDVKSETDSTPQKV-----LPP 182
P +S PM G T + V S ++G K + +K+ LP
Sbjct: 221 IPVESGLN---RPMAVKGLTNTGPQSIAVNISTSDGPSAAEKEAEKARKEKIAQQNALPS 277
Query: 183 WMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSDDKKSTVEDDKAS 228
WM S + G S +G LSD S +DD++S
Sbjct: 278 WM----------------SNSTVTGESFSGTLSDGLISLKQDDESS 307
>gi|238588643|ref|XP_002391788.1| hypothetical protein MPER_08733 [Moniliophthora perniciosa FA553]
gi|215456929|gb|EEB92718.1| hypothetical protein MPER_08733 [Moniliophthora perniciosa FA553]
Length = 496
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MR K+ L + + YIC C++ Y LD +L+ CE C E+V +
Sbjct: 60 MRHKIDSTLRNELDNKGYICTQCKQSYTPLDVDKLMDFTQGILICEICRAEVVDNENA-- 117
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLE 87
E G+++ R +L+ +L L+
Sbjct: 118 --ESTLGNNDRMSRFNHQLRFILAGLK 142
>gi|449273378|gb|EMC82872.1| General transcription factor IIE subunit 1 [Columba livia]
Length = 423
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
+R+K++ + T + CP+C Y L+ +L + ++F C CN E+ ++ L
Sbjct: 110 VRRKIEADERDSTTRSSFKCPSCSSTYTDLEVNQLFDVFTETFRCTYCNTEVEEDASALP 169
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDVP 106
++ + LL K ++P+ + +D+ +P
Sbjct: 170 KRDA---------------RTLLAKFNEQIEPIFALLRETEDIVLP 200
>gi|414881435|tpg|DAA58566.1| TPA: putative RNA-metabolising metallo-beta-lactamase [Zea mays]
Length = 558
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 174 STPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSD-DKKSTVEDDKASLQDE 232
+ P K L P+M++ +T QRGE KQ S D ++ D K TV+ DK D
Sbjct: 95 TYPTKALAPFMLEDYRKVTMGQRGEEKQYSYEDILRCMKKVTPMDLKQTVQVDK----DL 150
Query: 233 YIRAYYA 239
IRAYYA
Sbjct: 151 VIRAYYA 157
>gi|170073680|ref|XP_001870413.1| transcription initiation factor IIE subunit alpha [Culex
quinquefasciatus]
gi|167870342|gb|EDS33725.1| transcription initiation factor IIE subunit alpha [Culex
quinquefasciatus]
Length = 425
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRK+++ E + + CP+C + + L+A +L F C C G V E
Sbjct: 110 MRKRMETEERDATSRASFKCPSCNKTFTDLEADQLFDFATGEFRCTYC-GSAVEE----- 163
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDV-PEF 108
D +A ++ +L LL K L+PL + + +V+D+ + PE
Sbjct: 164 -------DSSALPKKDSRL--LLAKFNEQLQPLYDLLRQVEDIKLAPEI 203
>gi|19074444|ref|NP_585950.1| TRANSCRIPTION INITIATION FACTOR TFIIE ALPHA SUBUNIT
[Encephalitozoon cuniculi GB-M1]
gi|19069086|emb|CAD25554.1| TRANSCRIPTION INITIATION FACTOR TFIIE ALPHA SUBUNIT
[Encephalitozoon cuniculi GB-M1]
gi|449330109|gb|AGE96373.1| transcription initiation factor tfIIe alpha subunit
[Encephalitozoon cuniculi]
Length = 291
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 15 VQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53
V+ Y+C C + Y++LDA L +E+ F CE+C G+LV
Sbjct: 116 VEGYVCMECGKEYSSLDAQCL--MENYVFKCEDCKGDLV 152
>gi|357458105|ref|XP_003599333.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
gi|355488381|gb|AES69584.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
Length = 2156
Score = 37.7 bits (86), Expect = 6.7, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 3 KKLKDELECK------NTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGE---LV 53
++L+ +CK T+ ICP + L + LV LE + H ENC G +V
Sbjct: 761 ERLRSLFKCKLNLCNLKTIVLLICPMLVSLFQLLTSRSLVQLE--ALHIENCEGLENIIV 818
Query: 54 AESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQI 97
E +L ++E DGDDN + + L+ L + PL+E I
Sbjct: 819 DERRELESREDIDGDDNDNKSHGSMFQK-LKFLNIEGCPLLEYI 861
>gi|414881433|tpg|DAA58564.1| TPA: putative RNA-metabolising metallo-beta-lactamase [Zea mays]
Length = 400
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 174 STPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSD-DKKSTVEDDKASLQDE 232
+ P K L P+M++ +T QRGE KQ S D ++ D K TV+ DK D
Sbjct: 95 TYPTKALAPFMLEDYRKVTMGQRGEEKQYSYEDILRCMKKVTPMDLKQTVQVDK----DL 150
Query: 233 YIRAYYA 239
IRAYYA
Sbjct: 151 VIRAYYA 157
>gi|396081651|gb|AFN83266.1| transcription initiation factor TFIIE subunit alpha
[Encephalitozoon romaleae SJ-2008]
Length = 291
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53
M K L++ ++ T + Y+C C + Y++LDA L +E+ F CE+C G+LV
Sbjct: 103 MTKNLENSIKMAQT-EGYMCMECGKEYSSLDAQSL--MENYVFKCEDCKGDLV 152
>gi|312373741|gb|EFR21432.1| hypothetical protein AND_17055 [Anopheles darlingi]
Length = 435
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRK+++ E + + CP+C + + L+A +L D F C C G V E
Sbjct: 110 MRKRMETEERDATSRASFKCPSCNKTFTDLEADQLYDFSTDEFRCTYC-GSAVEE----- 163
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDV-PEF 108
D +A ++ +L LL K L+PL + + +V+ + + PE
Sbjct: 164 -------DSSALPKKDSRL--LLAKFNEQLQPLYDLLRQVEGIKLAPEI 203
>gi|156374954|ref|XP_001629848.1| predicted protein [Nematostella vectensis]
gi|156216857|gb|EDO37785.1| predicted protein [Nematostella vectensis]
Length = 421
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 1 MRKKLK-DELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKL 59
+RKK++ DE + KN ++C C +Y+ L+ RL+ + C C+G + E D
Sbjct: 117 VRKKIESDEKQAKNR-PSFVCSECHNKYSDLEVDRLIDMTTGLLKCTYCSG--IVEEDTS 173
Query: 60 AAQEGGD 66
QEG +
Sbjct: 174 EIQEGNN 180
>gi|414881434|tpg|DAA58565.1| TPA: putative RNA-metabolising metallo-beta-lactamase [Zea mays]
Length = 400
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 174 STPQKVLPPWMIKQGMNLTKEQRGEVKQESKMDGSSATGGLSD-DKKSTVEDDKASLQDE 232
+ P K L P+M++ +T QRGE KQ S D ++ D K TV+ DK D
Sbjct: 95 TYPTKALAPFMLEDYRKVTMGQRGEEKQYSYEDILRCMKKVTPMDLKQTVQVDK----DL 150
Query: 233 YIRAYYA 239
IRAYYA
Sbjct: 151 VIRAYYA 157
>gi|157131737|ref|XP_001662313.1| transcription initiation factor IIE, alpha subunit [Aedes aegypti]
gi|108871424|gb|EAT35649.1| AAEL012202-PA [Aedes aegypti]
Length = 423
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 1 MRKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLA 60
MRK+++ E + + CP C++ + L+A +L F C C G V E
Sbjct: 110 MRKRMETEERDATSRASFKCPACKKTFTDLEADQLFDFTTGEFRCTFC-GSTVEE----- 163
Query: 61 AQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQINRVKDLDV-PEF 108
D +A ++ +L LL K L+PL + + +V+D+ + PE
Sbjct: 164 -------DSSALPKKDSRL--LLAKFNEQLQPLYDLLRQVEDIKLAPEI 203
>gi|298207085|ref|YP_003715264.1| isoleucyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
gi|83849719|gb|EAP87587.1| isoleucyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
Length = 1134
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 88 VHLKPLMEQINRVKDLD--VPEFGTLQAWEARASAAGRAANGDSSSNDPNKSSQGYGGTP 145
+ PL +V D+ + E T W+ +A+ GR N +++ND N S Y G P
Sbjct: 464 ILYYPLDSWFIKVTDVKDRMHELNTTINWKPKATGEGRFGNWLANANDWNLSRSRYWGIP 523
Query: 146 MPFLG--DTKVEVAFSGAEGKQVDVKSETDS 174
+P D K E+ E ++++K ++
Sbjct: 524 LPIWRTEDGKEELMIGSVEDLKIEMKKSVEA 554
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.306 0.126 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,281,209,126
Number of Sequences: 23463169
Number of extensions: 226158257
Number of successful extensions: 777480
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 1304
Number of HSP's that attempted gapping in prelim test: 774957
Number of HSP's gapped (non-prelim): 3086
length of query: 330
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 188
effective length of database: 9,027,425,369
effective search space: 1697155969372
effective search space used: 1697155969372
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 77 (34.3 bits)