Query 020131
Match_columns 330
No_of_seqs 185 out of 288
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 12:15:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020131.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020131hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gmt_A Adenylate kinase; ssgci 97.4 0.00018 6E-09 66.2 5.9 63 17-100 131-193 (230)
2 1vd4_A Transcription initiatio 97.3 4.5E-05 1.5E-09 54.7 0.8 46 13-58 10-55 (62)
3 3sr0_A Adenylate kinase; phosp 96.4 0.0024 8E-08 57.0 4.5 56 17-100 124-179 (206)
4 4ayb_P DNA-directed RNA polyme 96.4 0.00043 1.5E-08 48.9 -0.5 33 17-54 3-35 (48)
5 1vq8_Z 50S ribosomal protein L 96.2 0.0014 4.7E-08 51.6 1.3 29 17-52 27-55 (83)
6 3dl0_A Adenylate kinase; phosp 96.2 0.0064 2.2E-07 52.7 5.7 63 17-100 127-189 (216)
7 3tlx_A Adenylate kinase 2; str 96.0 0.0062 2.1E-07 54.8 4.7 62 18-100 157-218 (243)
8 3fb4_A Adenylate kinase; psych 95.8 0.013 4.3E-07 50.7 5.9 63 17-100 127-189 (216)
9 6rxn_A Rubredoxin; electron tr 95.6 0.0052 1.8E-07 43.2 2.1 39 16-54 3-42 (46)
10 2e72_A POGO transposable eleme 95.3 0.0045 1.5E-07 43.9 0.9 34 14-54 9-42 (49)
11 1twf_L ABC10-alpha, DNA-direct 95.1 0.0066 2.3E-07 46.2 1.5 31 14-52 25-55 (70)
12 1pft_A TFIIB, PFTFIIBN; N-term 95.1 0.0095 3.3E-07 41.7 2.1 33 16-55 4-37 (50)
13 2kn9_A Rubredoxin; metalloprot 94.6 0.0093 3.2E-07 46.7 1.2 41 15-55 25-73 (81)
14 1e8j_A Rubredoxin; iron-sulfur 94.5 0.011 3.6E-07 42.5 1.2 36 17-52 3-46 (52)
15 2v3b_B Rubredoxin 2, rubredoxi 94.3 0.01 3.5E-07 43.1 0.6 38 17-54 3-48 (55)
16 2epr_A POZ-, at HOOK-, and zin 94.0 0.047 1.6E-06 36.1 3.5 37 14-50 9-48 (48)
17 1dx8_A Rubredoxin; electron tr 93.8 0.017 5.7E-07 44.0 1.0 42 15-56 5-54 (70)
18 2akl_A PHNA-like protein PA012 93.8 0.016 5.5E-07 49.1 0.9 30 17-54 27-56 (138)
19 1yk4_A Rubredoxin, RD; electro 93.7 0.015 5.1E-07 41.7 0.6 37 17-53 2-46 (52)
20 2epq_A POZ-, at HOOK-, and zin 93.7 0.035 1.2E-06 36.0 2.4 35 15-49 8-45 (45)
21 3a43_A HYPD, hydrogenase nicke 93.3 0.019 6.4E-07 48.7 0.7 41 13-53 66-118 (139)
22 1x5w_A Zinc finger protein 64, 92.9 0.095 3.2E-06 37.1 3.8 41 14-54 6-49 (70)
23 2adr_A ADR1; transcription reg 92.9 0.097 3.3E-06 35.7 3.7 37 17-53 2-41 (60)
24 1x6e_A Zinc finger protein 24; 92.9 0.083 2.8E-06 37.7 3.5 40 14-53 11-53 (72)
25 1s24_A Rubredoxin 2; electron 92.9 0.023 7.7E-07 45.0 0.5 41 15-55 33-81 (87)
26 3h0g_L DNA-directed RNA polyme 92.9 0.037 1.3E-06 41.4 1.6 32 15-54 19-50 (63)
27 2kdx_A HYPA, hydrogenase/ureas 92.9 0.038 1.3E-06 45.3 1.8 34 13-55 69-103 (119)
28 1bbo_A Human enhancer-binding 92.8 0.081 2.8E-06 35.6 3.2 37 17-53 1-40 (57)
29 2lv2_A Insulinoma-associated p 92.7 0.095 3.2E-06 40.3 3.8 41 14-54 25-68 (85)
30 4rxn_A Rubredoxin; electron tr 92.6 0.035 1.2E-06 40.2 1.1 39 17-55 3-49 (54)
31 2eps_A POZ-, at HOOK-, and zin 92.4 0.1 3.4E-06 35.5 3.2 39 14-52 9-51 (54)
32 2ene_A Zinc finger protein 347 92.3 0.14 4.7E-06 33.1 3.7 35 14-48 9-46 (46)
33 2lce_A B-cell lymphoma 6 prote 92.3 0.097 3.3E-06 37.4 3.2 42 12-53 12-56 (74)
34 2ysp_A Zinc finger protein 224 92.2 0.12 4.2E-06 33.4 3.3 35 14-48 9-46 (46)
35 2eme_A Zinc finger protein 473 92.1 0.13 4.5E-06 33.1 3.4 35 14-48 9-46 (46)
36 2epz_A Zinc finger protein 28 92.1 0.15 5.1E-06 32.9 3.7 35 14-48 9-46 (46)
37 2ct1_A Transcriptional repress 92.1 0.11 3.8E-06 37.4 3.3 40 14-53 12-56 (77)
38 3jyw_9 60S ribosomal protein L 92.0 0.13 4.5E-06 39.3 3.8 39 2-52 16-54 (72)
39 2ytn_A Zinc finger protein 347 92.0 0.16 5.4E-06 32.8 3.8 35 14-48 9-46 (46)
40 2eop_A Zinc finger protein 268 92.0 0.15 5.2E-06 32.8 3.6 35 14-48 9-46 (46)
41 2epx_A Zinc finger protein 28 91.9 0.11 3.8E-06 33.6 2.9 34 15-48 10-47 (47)
42 2em5_A ZFP-95, zinc finger pro 91.9 0.15 5.1E-06 33.0 3.5 35 14-48 9-46 (46)
43 2em7_A Zinc finger protein 224 91.9 0.15 5E-06 33.0 3.4 35 14-48 9-46 (46)
44 2el4_A Zinc finger protein 268 91.8 0.15 5.3E-06 32.8 3.5 35 14-48 9-46 (46)
45 2ytr_A Zinc finger protein 347 91.8 0.14 4.8E-06 33.0 3.3 35 14-48 9-46 (46)
46 2eml_A Zinc finger protein 28 91.8 0.15 5E-06 33.0 3.4 35 14-48 9-46 (46)
47 2elz_A Zinc finger protein 224 91.8 0.14 4.6E-06 33.2 3.2 35 14-48 9-46 (46)
48 2csh_A Zinc finger protein 297 91.7 0.27 9.3E-06 37.5 5.3 49 5-53 25-76 (110)
49 3uk3_C Zinc finger protein 217 91.6 0.081 2.8E-06 35.6 2.0 38 16-53 3-43 (57)
50 2eq0_A Zinc finger protein 347 91.6 0.19 6.5E-06 32.4 3.8 35 14-48 9-46 (46)
51 2eq4_A Zinc finger protein 224 91.6 0.15 5.1E-06 32.9 3.2 35 14-48 9-46 (46)
52 2drp_A Protein (tramtrack DNA- 91.6 0.093 3.2E-06 36.5 2.3 39 15-53 8-51 (66)
53 2en8_A Zinc finger protein 224 91.5 0.19 6.5E-06 32.3 3.7 35 14-48 9-46 (46)
54 2dmd_A Zinc finger protein 64, 91.5 0.21 7.2E-06 37.0 4.4 49 5-53 24-75 (96)
55 2em9_A Zinc finger protein 224 91.5 0.17 5.8E-06 32.6 3.4 35 14-48 9-46 (46)
56 2ytq_A Zinc finger protein 268 91.5 0.19 6.4E-06 32.5 3.6 35 14-48 9-46 (46)
57 2ep0_A Zinc finger protein 28 91.4 0.18 6E-06 32.6 3.4 34 15-48 10-46 (46)
58 2cot_A Zinc finger protein 435 91.4 0.2 7E-06 36.0 4.1 40 14-53 15-57 (77)
59 2en1_A Zinc finger protein 224 91.3 0.16 5.4E-06 32.8 3.1 35 14-48 9-46 (46)
60 2ep2_A Zinc finger protein 484 91.3 0.2 6.8E-06 32.3 3.6 35 14-48 9-46 (46)
61 2em0_A Zinc finger protein 224 91.3 0.17 5.8E-06 32.7 3.3 35 14-48 9-46 (46)
62 2epw_A Zinc finger protein 268 91.2 0.17 5.9E-06 32.5 3.2 34 15-48 10-46 (46)
63 2eoe_A Zinc finger protein 347 91.2 0.16 5.5E-06 32.7 3.1 35 14-48 9-46 (46)
64 2ee8_A Protein ODD-skipped-rel 91.2 0.29 1E-05 37.0 5.0 49 5-53 33-84 (106)
65 2emf_A Zinc finger protein 484 91.1 0.2 7E-06 32.3 3.6 35 14-48 9-46 (46)
66 2ctd_A Zinc finger protein 512 91.1 0.1 3.5E-06 40.3 2.4 38 15-53 32-73 (96)
67 2eoq_A Zinc finger protein 224 91.1 0.17 5.9E-06 32.6 3.1 35 14-48 9-46 (46)
68 4gzn_C ZFP-57, zinc finger pro 91.0 0.1 3.5E-06 37.6 2.1 39 16-54 3-44 (60)
69 2el6_A Zinc finger protein 268 91.0 0.19 6.5E-06 32.5 3.3 35 14-48 9-46 (46)
70 2ytg_A ZFP-95, zinc finger pro 90.9 0.15 5.1E-06 32.9 2.7 35 14-48 9-46 (46)
71 2eov_A Zinc finger protein 484 90.9 0.14 4.9E-06 32.9 2.6 34 15-48 10-46 (46)
72 2enc_A Zinc finger protein 224 90.9 0.19 6.5E-06 32.4 3.2 35 14-48 9-46 (46)
73 2ema_A Zinc finger protein 347 90.9 0.18 6.2E-06 32.5 3.1 35 14-48 9-46 (46)
74 2dlq_A GLI-kruppel family memb 90.8 0.28 9.4E-06 37.8 4.6 49 5-53 23-77 (124)
75 1dl6_A Transcription factor II 90.7 0.12 4.1E-06 37.6 2.2 33 17-55 11-43 (58)
76 2emy_A Zinc finger protein 268 90.6 0.16 5.5E-06 32.8 2.6 35 14-48 9-46 (46)
77 2yso_A ZFP-95, zinc finger pro 90.6 0.17 6E-06 32.6 2.8 34 15-48 10-46 (46)
78 2emx_A Zinc finger protein 268 90.5 0.16 5.5E-06 32.4 2.5 35 14-48 7-44 (44)
79 3cc2_Z 50S ribosomal protein L 90.5 0.11 3.7E-06 43.2 2.0 30 16-52 59-88 (116)
80 2ely_A Zinc finger protein 224 90.4 0.17 5.8E-06 32.7 2.6 35 14-48 9-46 (46)
81 2emm_A ZFP-95, zinc finger pro 90.4 0.16 5.6E-06 32.7 2.5 35 14-48 9-46 (46)
82 2en6_A Zinc finger protein 268 90.4 0.14 4.9E-06 33.0 2.2 35 14-48 9-46 (46)
83 2ytj_A Zinc finger protein 484 90.3 0.22 7.6E-06 32.1 3.1 34 15-48 10-46 (46)
84 2emk_A Zinc finger protein 28 90.2 0.17 5.9E-06 32.7 2.5 35 14-48 9-46 (46)
85 3be4_A Adenylate kinase; malar 90.2 0.33 1.1E-05 42.2 5.1 62 18-100 133-194 (217)
86 2ytd_A Zinc finger protein 473 90.0 0.2 6.8E-06 32.3 2.7 34 15-48 10-46 (46)
87 2ytk_A Zinc finger protein 347 90.0 0.18 6E-06 32.6 2.4 35 14-48 9-46 (46)
88 2d9h_A Zinc finger protein 692 89.9 0.087 3E-06 38.0 0.9 39 15-53 5-49 (78)
89 2em8_A Zinc finger protein 224 89.6 0.16 5.3E-06 32.9 1.9 35 14-48 9-46 (46)
90 2kmk_A Zinc finger protein GFI 89.5 0.17 6E-06 36.1 2.3 45 9-53 21-68 (82)
91 1yc5_A NAD-dependent deacetyla 89.5 0.21 7.3E-06 45.6 3.4 38 17-55 121-158 (246)
92 2k5c_A Uncharacterized protein 89.4 0.19 6.3E-06 39.6 2.5 37 17-53 8-62 (95)
93 2eoo_A ZFP-95, zinc finger pro 89.3 0.17 5.9E-06 32.7 1.9 35 14-48 9-46 (46)
94 2yt9_A Zinc finger-containing 89.3 0.27 9.1E-06 36.3 3.3 48 5-52 23-75 (95)
95 1a1h_A QGSR zinc finger peptid 89.3 0.19 6.6E-06 36.6 2.4 45 9-53 26-73 (90)
96 2yu8_A Zinc finger protein 347 89.2 0.16 5.6E-06 32.7 1.8 35 14-48 9-46 (46)
97 1x6h_A Transcriptional repress 89.2 0.29 9.9E-06 35.3 3.3 40 14-53 12-58 (86)
98 2ytm_A Zinc finger protein 28 89.1 0.17 5.8E-06 32.8 1.8 35 14-48 9-46 (46)
99 2emh_A Zinc finger protein 484 89.0 0.18 6.2E-06 32.5 1.9 35 14-48 9-46 (46)
100 2ep3_A Zinc finger protein 484 88.8 0.42 1.4E-05 30.7 3.6 35 14-48 9-46 (46)
101 2emp_A Zinc finger protein 347 88.7 0.2 6.8E-06 32.3 1.9 35 14-48 9-46 (46)
102 2gqj_A Zinc finger protein KIA 88.6 0.063 2.2E-06 41.1 -0.7 41 13-53 20-65 (98)
103 3j21_i 50S ribosomal protein L 88.4 0.15 5.1E-06 40.0 1.3 29 17-52 35-63 (83)
104 2yt9_A Zinc finger-containing 87.9 0.47 1.6E-05 35.0 3.8 40 14-53 4-46 (95)
105 2dmd_A Zinc finger protein 64, 87.8 0.57 1.9E-05 34.6 4.2 40 14-53 5-47 (96)
106 1q1a_A HST2 protein; ternary c 87.7 0.31 1.1E-05 45.6 3.3 39 17-55 136-176 (289)
107 2ytt_A Zinc finger protein 473 87.6 0.16 5.6E-06 32.8 0.9 35 14-48 9-46 (46)
108 3iz5_m 60S ribosomal protein L 87.5 0.2 6.8E-06 40.0 1.6 29 17-52 36-64 (92)
109 1dxg_A Desulforedoxin; non-hem 87.3 0.075 2.6E-06 35.1 -0.9 31 15-53 4-34 (36)
110 2em2_A Zinc finger protein 28 87.2 0.4 1.4E-05 30.9 2.7 35 14-48 9-46 (46)
111 1e4v_A Adenylate kinase; trans 87.2 0.52 1.8E-05 40.7 4.2 61 18-99 124-184 (214)
112 2ghf_A ZHX1, zinc fingers and 87.1 0.36 1.2E-05 38.3 2.9 44 11-54 12-62 (102)
113 4a17_Y RPL37A, 60S ribosomal p 86.9 0.19 6.5E-06 40.9 1.1 29 17-52 36-64 (103)
114 1llm_C Chimera of ZIF23-GCN4; 86.4 0.33 1.1E-05 35.8 2.1 37 17-53 3-42 (88)
115 2xb4_A Adenylate kinase; ATP-b 86.0 0.33 1.1E-05 42.5 2.4 60 19-99 128-193 (223)
116 2ee8_A Protein ODD-skipped-rel 85.8 0.51 1.7E-05 35.6 3.0 40 14-53 14-56 (106)
117 1q14_A HST2 protein; histone d 85.8 0.42 1.4E-05 46.5 3.1 39 17-55 144-184 (361)
118 2dlq_A GLI-kruppel family memb 85.8 0.37 1.3E-05 37.1 2.2 40 14-53 4-46 (124)
119 3j21_g 50S ribosomal protein L 85.7 0.4 1.4E-05 34.3 2.1 26 16-52 13-38 (51)
120 1l8d_A DNA double-strand break 85.7 1.3 4.5E-05 35.2 5.6 13 42-54 47-59 (112)
121 2ctu_A Zinc finger protein 483 85.6 0.056 1.9E-06 37.9 -2.4 36 14-53 15-50 (73)
122 1f2i_G Fusion of N-terminal 17 85.4 0.42 1.4E-05 33.7 2.2 39 15-53 17-60 (73)
123 2wbt_A B-129; zinc finger; 2.7 85.3 0.19 6.6E-06 39.6 0.4 38 15-53 72-111 (129)
124 3izc_m 60S ribosomal protein R 85.3 0.16 5.5E-06 40.6 -0.1 29 17-52 36-64 (92)
125 1ak2_A Adenylate kinase isoenz 84.6 1.4 4.7E-05 38.6 5.7 61 18-99 144-204 (233)
126 3k7a_M Transcription initiatio 84.3 0.48 1.6E-05 45.3 2.7 35 16-54 20-54 (345)
127 2gmg_A Hypothetical protein PF 84.3 0.54 1.9E-05 38.3 2.6 32 15-54 65-96 (105)
128 2kmk_A Zinc finger protein GFI 84.3 0.33 1.1E-05 34.6 1.2 37 17-53 1-40 (82)
129 2dlk_A Novel protein; ZF-C2H2 83.4 0.96 3.3E-05 32.1 3.5 19 15-33 36-56 (79)
130 3o9x_A Uncharacterized HTH-typ 83.4 0.54 1.8E-05 38.0 2.3 14 42-55 36-49 (133)
131 2apo_B Ribosome biogenesis pro 83.2 0.4 1.4E-05 35.4 1.3 25 17-54 6-30 (60)
132 2k4x_A 30S ribosomal protein S 83.0 0.53 1.8E-05 33.9 1.9 33 13-52 14-46 (55)
133 1p7a_A BF3, BKLF, kruppel-like 83.0 0.56 1.9E-05 28.4 1.8 21 14-34 8-28 (37)
134 1nui_A DNA primase/helicase; z 82.7 0.24 8.3E-06 44.9 -0.1 32 14-51 11-42 (255)
135 4esj_A Type-2 restriction enzy 82.2 0.32 1.1E-05 45.1 0.5 36 18-57 35-71 (257)
136 2eod_A TNF receptor-associated 82.0 0.83 2.8E-05 31.9 2.6 39 14-54 7-49 (66)
137 1ma3_A SIR2-AF2, transcription 81.8 0.41 1.4E-05 43.9 1.1 37 17-54 123-160 (253)
138 2ent_A Krueppel-like factor 15 81.7 1.6 5.6E-05 27.8 3.8 34 15-48 10-48 (48)
139 3mjh_B Early endosome antigen 81.6 0.61 2.1E-05 30.6 1.6 19 15-33 3-21 (34)
140 2lt7_A Transcriptional regulat 81.6 0.55 1.9E-05 38.4 1.7 39 15-53 20-61 (133)
141 1znf_A 31ST zinc finger from X 81.5 0.53 1.8E-05 26.2 1.2 17 18-34 2-18 (27)
142 3flo_B DNA polymerase alpha ca 81.4 0.6 2.1E-05 42.1 2.0 38 15-52 20-59 (206)
143 2wbs_A Krueppel-like factor 4; 81.4 1.1 3.7E-05 32.4 3.1 49 5-53 23-76 (89)
144 2ebt_A Krueppel-like factor 5; 81.3 1.3 4.4E-05 32.7 3.6 49 5-53 33-86 (100)
145 2kvh_A Zinc finger and BTB dom 80.8 0.56 1.9E-05 26.4 1.1 17 17-33 3-19 (27)
146 1ffk_W Ribosomal protein L37AE 80.6 0.48 1.7E-05 36.2 1.0 42 2-52 14-55 (73)
147 1wjp_A Zinc finger protein 295 80.6 0.3 1E-05 37.3 -0.3 40 14-53 13-53 (107)
148 1x6h_A Transcriptional repress 80.4 1.8 6.3E-05 30.9 4.1 35 16-50 46-83 (86)
149 2kvf_A Zinc finger and BTB dom 80.4 0.58 2E-05 26.4 1.1 18 17-34 3-20 (28)
150 3k1f_M Transcription initiatio 80.2 0.49 1.7E-05 42.2 1.0 36 16-55 20-55 (197)
151 2elx_A Zinc finger protein 406 80.2 0.76 2.6E-05 27.2 1.6 19 16-34 6-24 (35)
152 2elr_A Zinc finger protein 406 80.0 0.82 2.8E-05 27.4 1.7 19 15-33 7-25 (36)
153 2i13_A AART; DNA binding, zinc 80.0 1.1 3.9E-05 37.4 3.2 39 14-52 130-171 (190)
154 2eoj_A Zinc finger protein 268 79.9 1.4 4.8E-05 27.7 3.0 20 15-34 10-29 (44)
155 2ytp_A Zinc finger protein 484 79.7 1.8 6.3E-05 27.6 3.5 33 14-46 9-44 (46)
156 2els_A Zinc finger protein 406 79.7 0.86 2.9E-05 27.4 1.8 19 15-33 7-25 (36)
157 4bbr_M Transcription initiatio 79.6 0.36 1.2E-05 46.4 -0.0 35 17-55 21-55 (345)
158 2dmi_A Teashirt homolog 3; zin 79.6 0.83 2.8E-05 35.0 2.0 37 16-52 49-90 (115)
159 1ard_A Yeast transcription fac 79.6 0.72 2.4E-05 25.9 1.3 17 17-33 2-18 (29)
160 2kvg_A Zinc finger and BTB dom 79.4 0.56 1.9E-05 26.6 0.8 17 17-33 3-19 (27)
161 2m0d_A Zinc finger and BTB dom 79.2 0.75 2.6E-05 25.9 1.3 17 17-33 3-19 (30)
162 2el5_A Zinc finger protein 268 79.1 1.8 6.2E-05 26.8 3.3 21 14-34 7-27 (42)
163 2m0e_A Zinc finger and BTB dom 78.9 0.69 2.3E-05 25.8 1.1 13 17-29 2-14 (29)
164 2yts_A Zinc finger protein 484 78.9 1.9 6.7E-05 27.3 3.4 33 14-46 9-44 (46)
165 1srk_A Zinc finger protein ZFP 78.8 0.92 3.2E-05 27.0 1.7 20 15-34 5-24 (35)
166 2enh_A Zinc finger protein 28 78.8 2.1 7.2E-05 27.3 3.6 33 14-46 9-44 (46)
167 2eof_A Zinc finger protein 268 78.8 1.6 5.6E-05 27.3 3.0 21 14-34 9-29 (44)
168 2elt_A Zinc finger protein 406 78.7 0.87 3E-05 27.2 1.6 19 15-33 7-25 (36)
169 2yti_A Zinc finger protein 347 78.7 1.7 5.8E-05 27.7 3.1 33 14-46 9-44 (46)
170 2elo_A Zinc finger protein 406 78.4 0.79 2.7E-05 27.7 1.3 20 15-34 7-26 (37)
171 2eq2_A Zinc finger protein 347 78.4 1.9 6.6E-05 27.4 3.3 33 14-46 9-44 (46)
172 1wjp_A Zinc finger protein 295 78.4 0.61 2.1E-05 35.5 0.9 37 17-53 42-80 (107)
173 2elq_A Zinc finger protein 406 78.2 0.89 3E-05 27.4 1.5 20 15-34 7-26 (36)
174 1rik_A E6APC1 peptide; E6-bind 78.1 0.68 2.3E-05 26.1 0.9 17 17-33 2-18 (29)
175 2yrj_A Zinc finger protein 473 78.1 2.2 7.4E-05 27.0 3.5 33 14-46 9-44 (46)
176 2lvu_A Zinc finger and BTB dom 79.6 0.44 1.5E-05 26.6 0.0 17 17-33 2-18 (26)
177 2elv_A Zinc finger protein 406 77.9 0.99 3.4E-05 27.1 1.7 20 15-34 7-26 (36)
178 2lt7_A Transcriptional regulat 77.8 1.5 5E-05 35.9 3.1 40 14-53 47-89 (133)
179 2m0f_A Zinc finger and BTB dom 77.8 0.79 2.7E-05 25.6 1.1 17 17-33 2-18 (29)
180 2i13_A AART; DNA binding, zinc 77.5 1.2 3.9E-05 37.3 2.5 38 15-52 103-143 (190)
181 2jrp_A Putative cytoplasmic pr 77.4 0.89 3E-05 35.4 1.6 27 16-54 17-43 (81)
182 2ytf_A Zinc finger protein 268 77.3 2.3 7.9E-05 26.9 3.4 33 14-46 9-44 (46)
183 1zd8_A GTP:AMP phosphotransfer 77.2 3.6 0.00012 35.6 5.7 61 18-99 129-189 (227)
184 2epu_A Zinc finger protein 32; 76.9 2.1 7.1E-05 27.2 3.1 32 15-46 10-44 (45)
185 2dmi_A Teashirt homolog 3; zin 76.9 1.5 5.1E-05 33.5 2.8 39 14-52 16-60 (115)
186 2ej4_A Zinc finger protein ZIC 76.7 1.3 4.6E-05 32.5 2.4 38 16-53 24-73 (95)
187 2elm_A Zinc finger protein 406 76.7 1 3.5E-05 27.6 1.5 19 15-33 7-25 (37)
188 2eoy_A Zinc finger protein 473 76.7 2.5 8.4E-05 26.9 3.4 33 14-46 9-45 (46)
189 1paa_A Yeast transcription fac 76.6 0.91 3.1E-05 25.8 1.1 17 17-33 2-18 (30)
190 2csh_A Zinc finger protein 297 76.4 1.3 4.4E-05 33.6 2.3 39 14-53 7-48 (110)
191 2elp_A Zinc finger protein 406 76.4 1 3.5E-05 27.2 1.4 15 16-30 8-22 (37)
192 1ubd_C Protein (YY1 zinc finge 76.3 1.4 4.6E-05 34.1 2.4 12 17-28 34-45 (124)
193 1klr_A Zinc finger Y-chromosom 76.1 0.81 2.8E-05 25.7 0.8 16 17-32 2-17 (30)
194 3nw0_A Non-structural maintena 75.7 2 6.8E-05 39.2 3.7 39 16-55 192-230 (238)
195 3na7_A HP0958; flagellar bioge 75.6 1.4 4.7E-05 40.3 2.6 40 17-57 198-237 (256)
196 2yte_A Zinc finger protein 473 75.4 1.3 4.3E-05 27.6 1.7 20 15-34 8-27 (42)
197 2epc_A Zinc finger protein 32; 75.1 1.3 4.3E-05 27.5 1.6 20 15-34 9-28 (42)
198 2i5o_A DNA polymerase ETA; zin 75.1 0.58 2E-05 31.6 -0.1 22 16-37 8-29 (39)
199 2ytb_A Zinc finger protein 32; 75.1 1.3 4.4E-05 27.5 1.7 21 15-35 9-29 (42)
200 2jp9_A Wilms tumor 1; DNA bind 74.9 2.1 7.2E-05 32.5 3.2 17 16-32 65-81 (119)
201 1rim_A E6APC2 peptide; E6-bind 74.7 1 3.5E-05 27.0 1.1 18 17-34 2-19 (33)
202 3glr_A NAD-dependent deacetyla 74.5 0.98 3.3E-05 42.5 1.3 38 17-55 139-176 (285)
203 2enf_A Zinc finger protein 347 74.3 1.4 4.6E-05 28.2 1.6 33 14-46 9-44 (46)
204 2lvt_A Zinc finger and BTB dom 76.3 0.64 2.2E-05 26.4 0.0 17 17-33 2-18 (29)
205 1ubd_C Protein (YY1 zinc finge 74.1 5.7 0.0002 30.4 5.6 37 16-52 4-44 (124)
206 2j7j_A Transcription factor II 73.9 0.97 3.3E-05 32.2 0.9 47 6-53 20-72 (85)
207 2en2_A B-cell lymphoma 6 prote 73.7 1.5 5.1E-05 27.3 1.7 21 14-34 8-28 (42)
208 2lvr_A Zinc finger and BTB dom 75.5 0.71 2.4E-05 26.2 0.0 17 17-33 3-19 (30)
209 2emi_A Zinc finger protein 484 73.1 1.5 5.1E-05 27.9 1.6 33 14-46 9-44 (46)
210 1njq_A Superman protein; zinc- 73.1 1.6 5.5E-05 26.8 1.7 19 16-34 5-23 (39)
211 2eos_A B-cell lymphoma 6 prote 73.1 1.6 5.4E-05 27.2 1.7 20 15-34 9-28 (42)
212 2jp9_A Wilms tumor 1; DNA bind 73.0 2 6.7E-05 32.7 2.5 41 13-53 32-77 (119)
213 1qyp_A RNA polymerase II; tran 72.7 0.37 1.3E-05 34.4 -1.6 38 17-54 15-55 (57)
214 1fv5_A First zinc finger of U- 72.7 1.2 4.2E-05 28.8 1.1 29 15-47 6-34 (36)
215 2pk7_A Uncharacterized protein 72.6 1.6 5.4E-05 32.8 1.8 28 17-51 8-35 (69)
216 2epv_A Zinc finger protein 268 72.6 1.6 5.4E-05 27.7 1.6 20 15-34 10-29 (44)
217 2eon_A ZFP-95, zinc finger pro 72.5 1.6 5.3E-05 28.0 1.6 33 14-46 9-44 (46)
218 2emg_A Zinc finger protein 484 72.5 1.6 5.5E-05 27.8 1.7 32 15-46 10-44 (46)
219 3iuf_A Zinc finger protein UBI 72.4 1.6 5.6E-05 28.6 1.7 21 15-35 5-25 (48)
220 1gh9_A 8.3 kDa protein (gene M 72.2 1.2 4.1E-05 33.8 1.1 31 17-56 4-34 (71)
221 1a1h_A QGSR zinc finger peptid 72.1 1.8 6.1E-05 31.3 2.0 38 16-53 3-45 (90)
222 2adr_A ADR1; transcription reg 72.1 2.9 0.0001 27.9 3.0 30 5-34 18-47 (60)
223 2kfq_A FP1; protein, de novo p 72.0 0.84 2.9E-05 27.1 0.2 18 17-34 2-19 (32)
224 2hf1_A Tetraacyldisaccharide-1 71.7 1.5 5.3E-05 32.8 1.6 27 17-50 8-34 (68)
225 2emb_A Zinc finger protein 473 71.5 1.7 6E-05 27.3 1.6 21 14-34 9-29 (44)
226 2em4_A Zinc finger protein 28 71.5 1.8 6E-05 27.7 1.7 33 14-46 9-44 (46)
227 1x6e_A Zinc finger protein 24; 71.4 3 0.0001 29.3 3.0 30 5-34 30-59 (72)
228 2yto_A Zinc finger protein 484 71.3 1.7 5.9E-05 27.7 1.6 20 15-34 10-29 (46)
229 2en7_A Zinc finger protein 268 71.3 1.7 5.9E-05 27.2 1.6 20 15-34 10-29 (44)
230 2eow_A Zinc finger protein 347 71.2 1.8 6.3E-05 27.4 1.7 33 14-46 9-44 (46)
231 3u50_C Telomerase-associated p 71.0 1.3 4.6E-05 38.8 1.3 28 16-51 41-68 (172)
232 1m2k_A Silent information regu 70.9 0.99 3.4E-05 41.2 0.4 35 17-55 121-155 (249)
233 2eor_A Zinc finger protein 224 70.8 1.9 6.5E-05 27.3 1.7 21 14-34 9-29 (46)
234 2eq1_A Zinc finger protein 347 70.7 1.9 6.4E-05 27.5 1.7 33 14-46 9-44 (46)
235 2en9_A Zinc finger protein 28 70.7 1.9 6.6E-05 27.5 1.7 33 14-46 9-44 (46)
236 2em6_A Zinc finger protein 224 70.7 1.9 6.4E-05 27.5 1.7 33 14-46 9-44 (46)
237 2emj_A Zinc finger protein 28 70.7 1.8 6.1E-05 27.6 1.6 32 15-46 10-44 (46)
238 2ept_A Zinc finger protein 32; 70.6 1.9 6.6E-05 26.7 1.7 20 15-34 8-27 (41)
239 2yth_A Zinc finger protein 224 70.5 1.9 6.6E-05 27.5 1.7 33 14-46 9-44 (46)
240 2jr6_A UPF0434 protein NMA0874 70.1 1.7 5.8E-05 32.5 1.5 29 16-51 7-35 (68)
241 1x5w_A Zinc finger protein 64, 70.0 3.5 0.00012 28.6 3.1 31 4-34 24-54 (70)
242 2emz_A ZFP-95, zinc finger pro 69.7 1.9 6.6E-05 27.5 1.6 21 14-34 9-29 (46)
243 2eq3_A Zinc finger protein 347 69.7 1.7 5.7E-05 27.6 1.2 33 14-46 9-44 (46)
244 1bbo_A Human enhancer-binding 69.6 3.4 0.00012 27.2 2.9 30 5-34 17-46 (57)
245 2eoz_A Zinc finger protein 473 69.5 1.7 5.9E-05 27.7 1.3 32 15-46 10-44 (46)
246 1vzi_A Desulfoferrodoxin; ferr 69.5 0.69 2.4E-05 38.5 -0.9 34 15-56 5-38 (126)
247 3u31_A SIR2A, transcriptional 69.4 1.4 4.8E-05 41.4 1.1 37 17-55 154-194 (290)
248 2eou_A Zinc finger protein 473 69.3 2.1 7.2E-05 27.0 1.7 20 15-34 10-29 (44)
249 2js4_A UPF0434 protein BB2007; 69.2 1.9 6.6E-05 32.4 1.6 29 16-51 7-35 (70)
250 2eoh_A Zinc finger protein 28 69.1 2 6.9E-05 27.4 1.6 33 14-46 9-44 (46)
251 2epa_A Krueppel-like factor 10 68.9 3.7 0.00013 28.6 3.1 41 13-53 13-60 (72)
252 2yu5_A Zinc finger protein 473 68.8 1.7 5.8E-05 27.4 1.1 20 15-34 10-29 (44)
253 2em3_A Zinc finger protein 28 68.7 2.1 7.2E-05 27.2 1.6 32 15-46 10-44 (46)
254 2rpc_A Zinc finger protein ZIC 68.5 3.1 0.00011 33.4 2.9 39 15-53 23-73 (155)
255 3uk3_C Zinc finger protein 217 68.5 2.9 9.9E-05 27.6 2.3 26 9-34 24-49 (57)
256 2aus_D NOP10, ribosome biogene 68.4 1.7 5.8E-05 32.0 1.1 25 17-54 5-29 (60)
257 2ep1_A Zinc finger protein 484 68.4 2.1 7E-05 27.2 1.5 33 14-46 9-44 (46)
258 2eom_A ZFP-95, zinc finger pro 68.0 2.2 7.5E-05 27.3 1.6 21 14-34 9-29 (46)
259 1f2i_G Fusion of N-terminal 17 67.8 3 0.0001 29.1 2.4 26 9-34 41-66 (73)
260 2kre_A Ubiquitin conjugation f 67.8 3.1 0.0001 32.7 2.6 38 14-54 26-75 (100)
261 2en3_A ZFP-95, zinc finger pro 67.4 1.9 6.5E-05 27.4 1.1 20 15-34 10-29 (46)
262 1yui_A GAGA-factor; complex (D 67.1 2.4 8.3E-05 28.2 1.7 19 15-33 22-40 (54)
263 2lv2_A Insulinoma-associated p 66.9 3.9 0.00013 31.0 3.0 32 4-35 43-74 (85)
264 2eps_A POZ-, at HOOK-, and zin 66.8 4 0.00014 27.2 2.7 25 5-29 28-53 (54)
265 2eox_A Zinc finger protein 473 66.7 1.8 6.1E-05 27.3 0.9 21 14-34 9-29 (44)
266 2yrm_A B-cell lymphoma 6 prote 66.4 2.6 9.1E-05 26.5 1.7 20 15-34 8-27 (43)
267 2d9k_A FLN29 gene product; zin 66.4 0.47 1.6E-05 35.0 -2.3 42 12-53 12-54 (75)
268 1tf6_A Protein (transcription 66.4 4.7 0.00016 33.5 3.7 19 15-33 132-152 (190)
269 2jny_A Uncharacterized BCR; st 66.3 2.5 8.5E-05 31.6 1.7 28 17-51 10-37 (67)
270 1x4s_A Protein FON, zinc finge 65.8 1.9 6.4E-05 31.7 0.9 21 15-35 24-44 (59)
271 2lce_A B-cell lymphoma 6 prote 65.3 4.3 0.00015 28.5 2.8 30 5-34 33-62 (74)
272 1j8f_A SIRT2, sirtuin 2, isofo 65.2 3.1 0.00011 39.6 2.6 39 17-56 159-199 (323)
273 3f2b_A DNA-directed DNA polyme 64.8 1.5 5.2E-05 48.1 0.4 39 16-57 501-542 (1041)
274 2cot_A Zinc finger protein 435 64.3 4.8 0.00016 28.4 2.9 30 5-34 34-63 (77)
275 1ovx_A ATP-dependent CLP prote 63.7 0.71 2.4E-05 34.8 -1.7 30 16-48 17-46 (67)
276 2jne_A Hypothetical protein YF 63.6 2.2 7.4E-05 34.5 1.0 12 42-53 61-72 (101)
277 3h0g_I DNA-directed RNA polyme 63.5 1.5 5.2E-05 35.6 0.1 38 16-53 71-111 (113)
278 2j7j_A Transcription factor II 62.9 3.5 0.00012 29.1 2.0 37 17-53 1-44 (85)
279 3ir9_A Peptide chain release f 62.9 1.1 3.9E-05 38.7 -0.8 36 15-55 76-116 (166)
280 1kl7_A Threonine synthase; thr 62.6 4.3 0.00015 41.0 3.2 35 14-56 4-40 (514)
281 1qxf_A GR2, 30S ribosomal prot 62.4 3 0.0001 31.3 1.5 31 18-54 8-38 (66)
282 2drp_A Protein (tramtrack DNA- 62.1 3.3 0.00011 28.2 1.6 22 13-34 36-57 (66)
283 3j20_Y 30S ribosomal protein S 61.6 3.3 0.00011 29.1 1.6 33 12-52 14-47 (50)
284 2zjr_Z 50S ribosomal protein L 61.5 2.9 0.0001 30.5 1.3 26 13-50 26-51 (60)
285 2dkt_A Ring finger and CHY zin 61.1 1.3 4.3E-05 38.0 -0.9 31 19-49 73-105 (143)
286 4gzn_C ZFP-57, zinc finger pro 59.8 5.3 0.00018 28.3 2.4 26 9-34 24-49 (60)
287 1aky_A Adenylate kinase; ATP:A 59.7 9.6 0.00033 32.6 4.5 60 18-99 133-193 (220)
288 1l1o_C Replication protein A 7 59.4 3.3 0.00011 36.0 1.5 29 16-52 42-72 (181)
289 3lqh_A Histone-lysine N-methyl 59.2 6 0.0002 34.8 3.1 14 18-31 3-16 (183)
290 1y07_A Desulfoferrodoxin (RBO) 58.7 1 3.6E-05 37.5 -1.8 35 14-56 4-39 (128)
291 1sp2_A SP1F2; zinc finger, tra 58.6 3.9 0.00013 23.4 1.3 18 17-34 2-21 (31)
292 2kr4_A Ubiquitin conjugation f 58.4 3.7 0.00013 31.1 1.4 37 15-54 12-60 (85)
293 1wgm_A Ubiquitin conjugation f 57.9 6.6 0.00022 30.7 2.9 37 15-54 20-69 (98)
294 3j20_W 30S ribosomal protein S 57.9 3.9 0.00013 30.4 1.4 30 19-54 17-46 (63)
295 2yqq_A Zinc finger HIT domain- 57.8 3.5 0.00012 29.9 1.2 21 15-35 21-41 (56)
296 2ghf_A ZHX1, zinc fingers and 57.7 5 0.00017 31.5 2.2 36 15-50 48-87 (102)
297 1qyp_A RNA polymerase II; tran 57.4 2.9 9.8E-05 29.7 0.6 17 13-29 39-55 (57)
298 2f42_A STIP1 homology and U-bo 56.9 4.9 0.00017 35.3 2.1 42 11-54 100-153 (179)
299 3v2d_5 50S ribosomal protein L 56.4 5.1 0.00017 29.3 1.8 25 13-49 26-50 (60)
300 2eod_A TNF receptor-associated 55.8 8.4 0.00029 26.5 2.9 25 5-30 25-50 (66)
301 2rpc_A Zinc finger protein ZIC 55.5 13 0.00044 29.6 4.4 38 15-52 88-132 (155)
302 2fiy_A Protein FDHE homolog; F 55.2 3.6 0.00012 39.1 1.1 7 20-26 185-191 (309)
303 1twf_I B12.6, DNA-directed RNA 55.0 2 7E-05 35.3 -0.6 41 16-56 71-114 (122)
304 2gli_A Protein (five-finger GL 54.8 8.3 0.00028 30.6 3.1 40 13-52 93-140 (155)
305 2ds5_A CLPX, ATP-dependent CLP 54.2 1.4 4.8E-05 31.3 -1.4 29 17-48 11-39 (51)
306 2wbs_A Krueppel-like factor 4; 54.1 13 0.00045 26.3 3.9 39 15-53 3-48 (89)
307 2ebt_A Krueppel-like factor 5; 54.0 8.2 0.00028 28.2 2.7 30 5-34 63-92 (100)
308 2dlk_A Novel protein; ZF-C2H2 53.2 9.2 0.00032 26.7 2.8 40 14-53 4-51 (79)
309 2ct7_A Ring finger protein 31; 53.0 9.8 0.00033 29.0 3.1 33 14-53 22-54 (86)
310 2ab3_A ZNF29; zinc finger prot 52.7 4.6 0.00016 22.3 0.9 17 17-33 2-20 (29)
311 2avu_E Flagellar transcription 52.0 4.2 0.00014 36.3 0.9 30 16-50 133-162 (192)
312 3qt1_I DNA-directed RNA polyme 51.0 3.2 0.00011 34.8 0.0 38 17-54 92-132 (133)
313 2epp_A POZ-, at HOOK-, and zin 50.4 6.5 0.00022 28.6 1.6 37 15-51 11-49 (66)
314 1tf6_A Protein (transcription 50.4 12 0.00042 30.9 3.6 17 16-32 71-89 (190)
315 1zfd_A SWI5; DNA binding motif 50.3 5.1 0.00017 23.0 0.8 17 17-33 3-21 (32)
316 2ct1_A Transcriptional repress 50.0 5.4 0.00018 28.2 1.1 19 16-34 44-62 (77)
317 3ga8_A HTH-type transcriptiona 49.7 10 0.00035 28.3 2.7 13 42-54 36-48 (78)
318 2d9h_A Zinc finger protein 692 49.6 7.2 0.00025 27.5 1.7 20 15-34 36-55 (78)
319 3pih_A Uvrabc system protein A 49.4 4.9 0.00017 43.5 1.1 34 16-50 248-281 (916)
320 2xzm_6 RPS27E; ribosome, trans 49.2 6.4 0.00022 30.6 1.4 30 19-54 34-63 (81)
321 1u5k_A Hypothetical protein; O 49.2 5.5 0.00019 35.6 1.3 30 17-51 150-179 (244)
322 1h7b_A Anaerobic ribonucleotid 49.1 3.8 0.00013 42.4 0.2 33 12-51 535-567 (605)
323 2kpi_A Uncharacterized protein 48.9 3.8 0.00013 29.4 0.1 27 16-51 9-37 (56)
324 1llm_C Chimera of ZIF23-GCN4; 48.8 9.9 0.00034 27.5 2.4 40 13-52 27-68 (88)
325 2gli_A Protein (five-finger GL 48.8 14 0.00048 29.2 3.5 50 5-54 55-111 (155)
326 2kwq_A Protein MCM10 homolog; 48.2 4.2 0.00015 32.3 0.3 30 15-52 46-75 (92)
327 2ct0_A Non-SMC element 1 homol 48.1 14 0.00047 27.8 3.1 42 16-58 27-68 (74)
328 1s5p_A NAD-dependent deacetyla 48.0 4.4 0.00015 36.5 0.4 36 17-56 113-148 (235)
329 1bhi_A CRE-BP1, ATF-2; CRE bin 47.7 8.9 0.0003 22.9 1.7 19 16-34 5-25 (38)
330 3u5c_b RP61, YS20, 40S ribosom 47.4 6.6 0.00023 30.6 1.2 30 19-54 36-65 (82)
331 3vth_A Hydrogenase maturation 47.1 3.8 0.00013 43.5 -0.2 38 17-54 133-195 (761)
332 3qt1_I DNA-directed RNA polyme 46.8 3.6 0.00012 34.5 -0.3 35 17-54 24-58 (133)
333 1t1h_A Gspef-atpub14, armadill 46.7 12 0.0004 27.1 2.5 30 23-54 26-55 (78)
334 3iz6_X 40S ribosomal protein S 46.1 7.3 0.00025 30.6 1.4 32 18-55 37-68 (86)
335 2c2l_A CHIP, carboxy terminus 45.9 5.3 0.00018 35.5 0.6 39 14-54 205-255 (281)
336 4g9i_A Hydrogenase maturation 45.5 4.1 0.00014 43.2 -0.2 39 17-55 128-191 (772)
337 2ctd_A Zinc finger protein 512 45.2 13 0.00044 28.2 2.6 21 14-34 59-79 (96)
338 1ltl_A DNA replication initiat 45.0 3.8 0.00013 37.8 -0.5 33 15-51 132-165 (279)
339 2au3_A DNA primase; zinc ribbo 44.8 6 0.0002 38.4 0.8 28 18-50 35-63 (407)
340 1joc_A EEA1, early endosomal a 44.8 7.9 0.00027 31.8 1.4 32 17-57 69-100 (125)
341 2eln_A Zinc finger protein 406 44.4 10 0.00035 24.4 1.7 19 15-33 7-27 (38)
342 3e20_C Eukaryotic peptide chai 44.1 4.3 0.00015 40.3 -0.3 31 17-53 337-374 (441)
343 2k5c_A Uncharacterized protein 43.6 7.2 0.00025 30.6 0.9 11 17-27 51-61 (95)
344 1d0q_A DNA primase; zinc-bindi 43.6 7 0.00024 30.8 0.9 29 17-50 37-66 (103)
345 1yop_A KTI11P; zinc finger, me 43.3 7.4 0.00025 30.3 1.0 34 17-53 23-56 (83)
346 1vfy_A Phosphatidylinositol-3- 43.2 9.6 0.00033 28.2 1.6 29 19-56 13-41 (73)
347 1p91_A Ribosomal RNA large sub 42.8 6.7 0.00023 34.4 0.7 25 17-50 2-26 (269)
348 1tfi_A Transcriptional elongat 42.8 5.3 0.00018 28.0 0.1 30 17-52 9-47 (50)
349 1dvp_A HRS, hepatocyte growth 42.1 10 0.00035 33.6 1.8 31 18-57 162-192 (220)
350 1vq8_Z 50S ribosomal protein L 41.9 9 0.00031 29.7 1.3 25 27-56 17-41 (83)
351 2gqj_A Zinc finger protein KIA 41.8 7.2 0.00024 29.2 0.7 20 16-35 53-72 (98)
352 1zbd_B Rabphilin-3A; G protein 41.8 16 0.00055 30.5 2.9 38 15-52 53-90 (134)
353 1ncs_A Peptide M30F, transcrip 41.6 10 0.00035 24.3 1.3 15 15-29 16-32 (47)
354 1va1_A Transcription factor SP 41.5 12 0.00042 22.4 1.7 19 15-33 6-26 (37)
355 3bvo_A CO-chaperone protein HS 40.7 13 0.00045 33.0 2.3 30 16-53 9-38 (207)
356 3h0g_I DNA-directed RNA polyme 40.5 4.3 0.00015 32.8 -0.8 34 18-54 5-38 (113)
357 2f9y_B Acetyl-coenzyme A carbo 40.3 9.8 0.00033 35.8 1.5 32 16-53 23-54 (304)
358 3ztg_A E3 ubiquitin-protein li 39.9 22 0.00076 26.3 3.2 30 23-53 32-61 (92)
359 1z2q_A LM5-1; membrane protein 39.5 15 0.0005 27.9 2.1 33 16-57 20-52 (84)
360 3zyq_A Hepatocyte growth facto 38.9 11 0.00036 33.9 1.4 30 19-57 166-195 (226)
361 2co8_A NEDD9 interacting prote 38.7 8.6 0.00029 28.6 0.7 38 17-54 15-54 (82)
362 1x6f_A Zinc finger protein 462 38.5 13 0.00044 28.1 1.7 35 15-49 23-60 (88)
363 1twf_I B12.6, DNA-directed RNA 38.5 4.7 0.00016 33.0 -0.9 35 17-54 4-38 (122)
364 2l6l_A DNAJ homolog subfamily 38.2 8.5 0.00029 32.2 0.7 32 17-52 112-143 (155)
365 2ysl_A Tripartite motif-contai 36.8 26 0.00089 24.6 3.0 39 16-54 19-69 (73)
366 3axs_A Probable N(2),N(2)-dime 36.7 12 0.0004 36.4 1.5 31 17-53 244-274 (392)
367 2jr7_A DPH3 homolog; DESR1, CS 36.7 14 0.00048 29.1 1.6 34 17-53 23-56 (89)
368 3cng_A Nudix hydrolase; struct 36.7 6.2 0.00021 33.4 -0.4 29 18-50 4-33 (189)
369 1wii_A Hypothetical UPF0222 pr 36.6 14 0.00046 28.8 1.5 12 40-51 21-32 (85)
370 3t7l_A Zinc finger FYVE domain 35.9 20 0.00067 27.6 2.4 32 17-57 20-51 (90)
371 3a1b_A DNA (cytosine-5)-methyl 35.0 28 0.00097 30.1 3.5 48 2-49 21-86 (159)
372 2epa_A Krueppel-like factor 10 34.2 29 0.001 23.7 2.9 30 5-34 35-66 (72)
373 4gop_C Putative uncharacterize 34.0 12 0.0004 36.6 1.0 29 16-52 307-337 (444)
374 2r6f_A Excinuclease ABC subuni 33.9 12 0.00039 41.0 1.0 34 16-50 266-299 (972)
375 2f9i_B Acetyl-coenzyme A carbo 33.5 20 0.00067 33.5 2.4 33 15-53 28-60 (285)
376 2yw8_A RUN and FYVE domain-con 33.4 27 0.00093 26.3 2.8 33 16-57 18-50 (82)
377 1vk6_A NADH pyrophosphatase; 1 32.8 7.3 0.00025 35.8 -0.7 30 17-53 107-136 (269)
378 1wge_A Hypothetical protein 26 32.3 15 0.00052 28.5 1.2 34 17-53 30-63 (83)
379 2zkr_2 60S ribosomal protein L 32.0 25 0.00087 28.1 2.4 28 14-51 13-40 (97)
380 1wfk_A Zinc finger, FYVE domai 31.7 16 0.00054 28.2 1.2 33 16-57 8-40 (88)
381 1x4u_A Zinc finger, FYVE domai 31.7 19 0.00065 27.2 1.6 32 17-57 14-45 (84)
382 3q87_A Putative uncharacterize 31.3 13 0.00044 31.0 0.7 13 17-29 99-111 (125)
383 2fiy_A Protein FDHE homolog; F 29.9 12 0.00039 35.6 0.1 11 43-53 254-264 (309)
384 3irb_A Uncharacterized protein 29.7 16 0.00054 30.6 0.9 28 15-53 45-72 (145)
385 2cor_A Pinch protein; LIM doma 29.5 20 0.00068 26.3 1.4 38 16-54 14-53 (79)
386 2wbt_A B-129; zinc finger; 2.7 29.4 18 0.00063 27.8 1.2 20 15-34 98-117 (129)
387 1y02_A CARP2, FYVE-ring finger 29.3 21 0.00073 29.3 1.7 32 17-57 19-50 (120)
388 1jm7_A BRCA1, breast cancer ty 28.4 20 0.00068 27.5 1.2 38 17-54 21-70 (112)
389 2ckl_B Ubiquitin ligase protei 27.9 32 0.0011 28.5 2.6 14 41-54 89-102 (165)
390 2dj7_A Actin-binding LIM prote 27.7 11 0.00039 27.9 -0.3 37 17-53 15-53 (80)
391 2y43_A E3 ubiquitin-protein li 27.4 46 0.0016 25.0 3.2 30 22-54 40-69 (99)
392 2yww_A Aspartate carbamoyltran 27.2 8.6 0.00029 33.1 -1.2 14 41-54 132-145 (149)
393 2gnr_A Conserved hypothetical 26.7 21 0.00073 30.0 1.2 26 15-51 45-70 (145)
394 2cu8_A Cysteine-rich protein 2 26.4 12 0.00041 27.0 -0.3 38 17-54 9-48 (76)
395 2vl6_A SSO MCM N-TER, minichro 26.3 15 0.0005 33.4 0.2 33 15-50 139-176 (268)
396 4ap4_A E3 ubiquitin ligase RNF 25.9 15 0.00052 28.6 0.2 36 18-54 49-84 (133)
397 1nyp_A Pinch protein; LIM doma 25.9 13 0.00044 26.0 -0.3 37 17-54 5-43 (66)
398 3ttc_A HYPF, transcriptional r 25.8 13 0.00044 38.8 -0.4 36 17-52 39-99 (657)
399 1e4u_A Transcriptional repress 25.4 58 0.002 24.1 3.4 14 41-54 49-62 (78)
400 3pki_A NAD-dependent deacetyla 25.3 13 0.00043 36.2 -0.5 39 16-54 137-183 (355)
401 3lrq_A E3 ubiquitin-protein li 25.2 28 0.00096 26.6 1.6 33 20-54 38-70 (100)
402 1wg2_A Zinc finger (AN1-like) 25.0 28 0.00097 25.8 1.5 24 17-52 15-38 (64)
403 2ygr_A Uvrabc system protein A 24.9 22 0.00074 39.0 1.1 34 16-50 274-308 (993)
404 2akl_A PHNA-like protein PA012 24.7 23 0.00079 29.9 1.0 18 14-31 41-58 (138)
405 3k35_A NAD-dependent deacetyla 24.6 13 0.00044 35.5 -0.6 39 16-54 137-183 (318)
406 3riy_A NAD-dependent deacetyla 24.6 12 0.00041 34.5 -0.8 12 17-28 134-145 (273)
407 3mhs_C SAGA-associated factor 24.5 30 0.001 27.8 1.6 12 42-53 70-81 (99)
408 3htk_C E3 SUMO-protein ligase 24.5 55 0.0019 30.5 3.7 41 13-54 177-232 (267)
409 1iml_A CRIP, cysteine rich int 24.4 16 0.00055 26.3 0.0 36 19-54 2-39 (76)
410 1zr9_A Zinc finger protein 593 24.4 21 0.00072 29.6 0.7 21 15-35 48-68 (124)
411 2lk0_A RNA-binding protein 5; 24.3 35 0.0012 21.5 1.6 24 17-52 5-29 (32)
412 3f6q_B LIM and senescent cell 24.3 11 0.00039 26.4 -0.8 37 18-54 12-51 (72)
413 1wig_A KIAA1808 protein; LIM d 24.2 19 0.00066 25.9 0.4 35 18-53 6-42 (73)
414 2ecy_A TNF receptor-associated 24.0 50 0.0017 22.8 2.6 37 16-54 14-62 (66)
415 1wfh_A Zinc finger (AN1-like) 23.7 33 0.0011 25.4 1.6 25 16-52 14-38 (64)
416 1x6a_A LIMK-2, LIM domain kina 23.7 25 0.00086 25.5 1.0 35 19-54 17-53 (81)
417 2hjh_A NAD-dependent histone d 23.7 19 0.00065 34.5 0.4 34 17-51 161-194 (354)
418 3cw1_L U1 small nuclear ribonu 23.3 2.4E+02 0.0084 21.3 6.5 14 42-55 3-16 (77)
419 2jvx_A NF-kappa-B essential mo 23.1 35 0.0012 21.2 1.4 10 43-52 4-13 (28)
420 3alr_A Nanos protein; zinc-fin 22.8 25 0.00084 28.6 0.8 10 17-26 71-80 (106)
421 2d8y_A Eplin protein; LIM doma 22.7 18 0.00062 27.1 0.0 38 17-54 15-54 (91)
422 1a7i_A QCRP2 (LIM1); LIM domai 22.6 14 0.00049 26.9 -0.6 38 17-54 7-46 (81)
423 1x3c_A Zinc finger protein 292 22.4 38 0.0013 25.7 1.8 21 15-35 25-47 (73)
424 1wyh_A SLIM 2, skeletal muscle 22.4 20 0.00068 25.3 0.2 38 17-54 5-45 (72)
425 2l4z_A DNA endonuclease RBBP8, 22.3 13 0.00045 30.0 -0.9 37 17-53 61-99 (123)
426 1x64_A Alpha-actinin-2 associa 22.3 24 0.00083 26.3 0.7 38 16-54 24-63 (89)
427 3f9v_A Minichromosome maintena 22.1 18 0.00062 36.7 -0.1 34 15-50 133-170 (595)
428 2be7_D Aspartate carbamoyltran 22.1 9.9 0.00034 32.8 -1.8 13 41-53 133-145 (153)
429 2jsp_A Transcriptional regulat 21.8 24 0.00082 27.6 0.6 21 11-31 15-35 (87)
430 3mpx_A FYVE, rhogef and PH dom 21.8 19 0.00066 34.3 0.0 32 17-57 375-406 (434)
431 2k16_A Transcription initiatio 21.7 54 0.0018 23.9 2.5 17 12-28 13-29 (75)
432 1wfp_A Zinc finger (AN1-like) 21.3 38 0.0013 25.8 1.6 24 17-52 25-48 (74)
433 2zet_C Melanophilin; complex, 21.2 44 0.0015 28.5 2.1 29 17-53 68-96 (153)
434 2iyb_E Testin, TESS, TES; LIM 21.2 18 0.00062 25.4 -0.2 36 18-53 3-43 (65)
435 1x61_A Thyroid receptor intera 21.1 23 0.00078 25.1 0.3 37 17-53 5-44 (72)
436 4ddu_A Reverse gyrase; topoiso 20.4 38 0.0013 37.1 2.0 27 18-51 9-35 (1104)
437 4arc_A Leucine--tRNA ligase; l 20.4 15 0.00051 39.6 -1.2 37 12-56 171-207 (880)
438 4iao_A NAD-dependent histone d 20.0 28 0.00095 35.2 0.7 34 16-50 298-331 (492)
No 1
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=97.40 E-value=0.00018 Score=66.16 Aligned_cols=63 Identities=21% Similarity=0.211 Sum_probs=53.1
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccchhhhhhcCCCCChhHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQ 96 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~~~~~~e~~~g~~na~r~~~e~~k~~l~r~n~QlkpI~~~ 96 (330)
..+||.||+.|.. .++|....-+|+.||.+|+...++. .+.++.+|..|..|+.||+++
T Consensus 131 R~~~~~~G~~Yh~-----~~~pp~~~~~~d~~g~~L~~R~DD~----------------~e~i~~Rl~~y~~~t~pl~~~ 189 (230)
T 3gmt_A 131 RRTHPASGRTYHV-----KFNPPKVEGKDDVTGEPLVQRDDDK----------------EETVKKRLDVYEAQTKPLITY 189 (230)
T ss_dssp EEEETTTTEEEET-----TTBCCSSTTBCTTTCCBCBCCGGGS----------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccCCcccc-----cCCCCCccCcCCCccCccccCCCCC----------------HHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999986 5778777789999999998876642 256788999999999999999
Q ss_pred HHhh
Q 020131 97 INRV 100 (330)
Q Consensus 97 Lk~i 100 (330)
+++.
T Consensus 190 Y~~~ 193 (230)
T 3gmt_A 190 YGDW 193 (230)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 9874
No 2
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=97.32 E-value=4.5e-05 Score=54.67 Aligned_cols=46 Identities=22% Similarity=0.573 Sum_probs=37.0
Q ss_pred CCCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccchh
Q 020131 13 NTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDK 58 (330)
Q Consensus 13 ~~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~~ 58 (330)
+....|.|+.|++.|+....+..+-.....|.|+.||.......+.
T Consensus 10 ~~~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~~~~ 55 (62)
T 1vd4_A 10 TNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESA 55 (62)
T ss_dssp CSSSEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEECTTC
T ss_pred CCCCCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccccCccc
Confidence 4456899999999999998887655545679999999988766553
No 3
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=96.43 E-value=0.0024 Score=57.01 Aligned_cols=56 Identities=18% Similarity=0.271 Sum_probs=47.2
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccchhhhhhcCCCCChhHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQ 96 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~~~~~~e~~~g~~na~r~~~e~~k~~l~r~n~QlkpI~~~ 96 (330)
..+||.||..|.. .|.||.||..|+...++. .+.++.+|..|++|+.||+++
T Consensus 124 R~~~~~~g~~y~~------------~~~pp~~g~~l~~r~DD~----------------~e~i~~Rl~~Y~~~t~pl~~~ 175 (206)
T 3sr0_A 124 RRINPETGEVYHV------------KYNPPPPGVKVIQREDDK----------------PEVIKKRLEVYREQTAPLIEY 175 (206)
T ss_dssp EEECTTTCCEEET------------TTBCCCTTCCCBCCGGGS----------------HHHHHHHHHHHHHHTTHHHHH
T ss_pred CccccCCCceeee------------eccCCCCCceecccCCCC----------------HHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999975 689999999998876642 246688899999999999999
Q ss_pred HHhh
Q 020131 97 INRV 100 (330)
Q Consensus 97 Lk~i 100 (330)
+++-
T Consensus 176 Y~~~ 179 (206)
T 3sr0_A 176 YKKK 179 (206)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9874
No 4
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=96.38 E-value=0.00043 Score=48.91 Aligned_cols=33 Identities=18% Similarity=0.509 Sum_probs=26.2
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
-|+|-+||+.|+..|-..| -+-+||+||..+..
T Consensus 3 iY~C~rCg~~fs~~el~~l-----P~IrCpyCGyrii~ 35 (48)
T 4ayb_P 3 VYRCGKCWKTFTDEQLKVL-----PGVRCPYCGYKIIF 35 (48)
T ss_dssp --CCCCTTTTCCCCCSCCC-----SSSCCTTTCCSCEE
T ss_pred EEEeeccCCCccHHHHhhC-----CCcccCccCcEEEE
Confidence 6999999999998776655 26899999998765
No 5
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=96.17 E-value=0.0014 Score=51.55 Aligned_cols=29 Identities=21% Similarity=0.621 Sum_probs=24.2
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
.|.||+||+.. ++++..+.+.|+.||...
T Consensus 27 ~y~Cp~CG~~~-------v~r~atGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 27 DHACPNCGEDR-------VDRQGTGIWQCSYCDYKF 55 (83)
T ss_dssp CEECSSSCCEE-------EEEEETTEEEETTTCCEE
T ss_pred cCcCCCCCCcc-------eeccCCCeEECCCCCCEe
Confidence 69999999854 456677899999999875
No 6
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=96.16 E-value=0.0064 Score=52.73 Aligned_cols=63 Identities=21% Similarity=0.363 Sum_probs=50.1
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccchhhhhhcCCCCChhHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQ 96 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~~~~~~e~~~g~~na~r~~~e~~k~~l~r~n~QlkpI~~~ 96 (330)
..+||.||..|.. .++|......|+.||..|....+.. .+.++.++..+..++.|++++
T Consensus 127 R~~~~~~g~~y~~-----~~~pp~~~~~~~~~~~~l~~r~~d~----------------~e~i~~rl~~~~~~~~~~~~~ 185 (216)
T 3dl0_A 127 RRICSVCGTTYHL-----VFNPPKTPGICDKDGGELYQRADDN----------------EETVTKRLEVNMKQTAPLLDF 185 (216)
T ss_dssp EEEETTTCCEEET-----TTBCCSSTTBCTTTCCBEECCTTCS----------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCccCCcccc-----ccCCCcccCccccccccccCCCCCC----------------HHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999986 4677777789999999997654421 245677889999999999999
Q ss_pred HHhh
Q 020131 97 INRV 100 (330)
Q Consensus 97 Lk~i 100 (330)
++..
T Consensus 186 ~~~~ 189 (216)
T 3dl0_A 186 YDEK 189 (216)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8864
No 7
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=95.96 E-value=0.0062 Score=54.79 Aligned_cols=62 Identities=19% Similarity=0.263 Sum_probs=50.9
Q ss_pred eecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccchhhhhhcCCCCChhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 020131 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQI 97 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~~~~~~e~~~g~~na~r~~~e~~k~~l~r~n~QlkpI~~~L 97 (330)
..||.||+.|.. .++|......|+.||.+|+...+.. .+.++.+|..+..++.||+++.
T Consensus 157 ~~~~~~g~~y~~-----~~~pp~~~~~~~~~~~~l~~r~dd~----------------~e~i~~Rl~~~~~~~~~l~~~y 215 (243)
T 3tlx_A 157 LIHKPSGRIYHK-----IFNPPKVPFRDDVTNEPLIQREDDN----------------EDVLKKRLTVFKSETSPLISYY 215 (243)
T ss_dssp EEETTTTEEEET-----TTBCCSSTTBCTTTCCBCBCCGGGS----------------HHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCCcccCccccc-----ccCCCcccCccccccccccCCCCCC----------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999986 4778777889999999998765532 2456788999999999999998
Q ss_pred Hhh
Q 020131 98 NRV 100 (330)
Q Consensus 98 k~i 100 (330)
+..
T Consensus 216 ~~~ 218 (243)
T 3tlx_A 216 KNK 218 (243)
T ss_dssp HHT
T ss_pred Hhc
Confidence 864
No 8
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=95.81 E-value=0.013 Score=50.73 Aligned_cols=63 Identities=22% Similarity=0.407 Sum_probs=49.4
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccchhhhhhcCCCCChhHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQ 96 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~~~~~~e~~~g~~na~r~~~e~~k~~l~r~n~QlkpI~~~ 96 (330)
..+||.||..|.. .++|......|+.||..|....+.. .+.++.++..+..++.|+++.
T Consensus 127 R~~~~~~g~~y~~-----~~~pp~~~~~~~~~~~~l~~r~~d~----------------~e~i~~rl~~~~~~~~~~~~~ 185 (216)
T 3fb4_A 127 RWICKTCGATYHT-----IFNPPAVEGICDKDGGELYQRIDDK----------------PETVKNRLDVNMKQTQPLLDF 185 (216)
T ss_dssp EEEETTTCCEEET-----TTBCCSSTTBCTTTCCBEECCGGGS----------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccCCcccc-----ccCCCCcccccccccCccccCCCCC----------------HHHHHHHHHHHHHhHHHHHHH
Confidence 3689999999985 4567667789999999997654431 235567889999999999998
Q ss_pred HHhh
Q 020131 97 INRV 100 (330)
Q Consensus 97 Lk~i 100 (330)
+...
T Consensus 186 ~~~~ 189 (216)
T 3fb4_A 186 YSQK 189 (216)
T ss_dssp HHHT
T ss_pred HHcC
Confidence 8764
No 9
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=95.59 E-value=0.0052 Score=43.18 Aligned_cols=39 Identities=21% Similarity=0.432 Sum_probs=25.4
Q ss_pred CeeecCCCCccccHHHHH-hhcCCCCCCeeccCCCccccc
Q 020131 16 QEYICPNCQRRYNALDAL-RLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~-~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
+.|+|+.||..|....-. ..|+-....|+||.||..-..
T Consensus 3 ~~y~C~vCGyvyd~~~Gd~t~f~~lP~dw~CP~Cg~~k~~ 42 (46)
T 6rxn_A 3 QKYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVSKDQ 42 (46)
T ss_dssp CCEEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCCBGGG
T ss_pred CEEECCCCCeEEeCCcCCCcchhhCCCCCcCcCCCCcHHH
Confidence 369999999999753222 111111236999999987544
No 10
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.31 E-value=0.0045 Score=43.90 Aligned_cols=34 Identities=26% Similarity=0.542 Sum_probs=27.7
Q ss_pred CCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 14 TVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
+...|.||+|++.|+.+++++. ..|.-|+..+.+
T Consensus 9 ~~~~~~CPrCn~~f~~~~sLr~-------HmkycCp~~v~~ 42 (49)
T 2e72_A 9 DGGRKICPRCNAQFRVTEALRG-------HMCYCCPEMVEY 42 (49)
T ss_dssp CSSCCCCTTTCCCCSSHHHHHH-------HHHHHCTTTCCC
T ss_pred cCCceeCCcccccccchHHHHh-------hhhhcCcchhhh
Confidence 3468999999999999999987 667777777644
No 11
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=95.13 E-value=0.0066 Score=46.21 Aligned_cols=31 Identities=23% Similarity=0.768 Sum_probs=24.2
Q ss_pred CCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 14 TVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
....|+|+.||..|... + ...-+|+.||..+
T Consensus 25 ~~v~Y~C~~CG~~~e~~------~--~d~irCp~CG~RI 55 (70)
T 1twf_L 25 ATLKYICAECSSKLSLS------R--TDAVRCKDCGHRI 55 (70)
T ss_dssp CCCCEECSSSCCEECCC------T--TSTTCCSSSCCCC
T ss_pred ceEEEECCCCCCcceeC------C--CCCccCCCCCceE
Confidence 56789999999999864 1 1356899999944
No 12
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=95.07 E-value=0.0095 Score=41.70 Aligned_cols=33 Identities=18% Similarity=0.596 Sum_probs=25.6
Q ss_pred CeeecCCCCc-cccHHHHHhhcCCCCCCeeccCCCcccccc
Q 020131 16 QEYICPNCQR-RYNALDALRLVSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 16 ~~Y~CP~C~~-~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~ 55 (330)
..++||.|+. .. .+|+..+.++|..||..+.+.
T Consensus 4 ~~~~CP~C~~~~l-------~~d~~~gelvC~~CG~v~~e~ 37 (50)
T 1pft_A 4 KQKVCPACESAEL-------IYDPERGEIVCAKCGYVIEEN 37 (50)
T ss_dssp SCCSCTTTSCCCE-------EEETTTTEEEESSSCCBCCCC
T ss_pred ccEeCcCCCCcce-------EEcCCCCeEECcccCCccccc
Confidence 4689999988 32 346777899999999988543
No 13
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=94.64 E-value=0.0093 Score=46.69 Aligned_cols=41 Identities=15% Similarity=0.284 Sum_probs=26.6
Q ss_pred CCeeecCCCCccccHHH--HHh------hcCCCCCCeeccCCCcccccc
Q 020131 15 VQEYICPNCQRRYNALD--ALR------LVSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lD--A~~------Lld~~~~~F~C~~Cg~eL~~~ 55 (330)
...|+|+.||..|.... ... .|+.....|+||.||..=..+
T Consensus 25 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~K~~F 73 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDF 73 (81)
T ss_dssp CCEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCCGGGE
T ss_pred cceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCCHHHc
Confidence 35799999999997532 111 112123479999999875444
No 14
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=94.53 E-value=0.011 Score=42.53 Aligned_cols=36 Identities=19% Similarity=0.446 Sum_probs=24.0
Q ss_pred eeecCCCCccccHHH--HHhh------cCCCCCCeeccCCCccc
Q 020131 17 EYICPNCQRRYNALD--ALRL------VSLEDDSFHCENCNGEL 52 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lD--A~~L------ld~~~~~F~C~~Cg~eL 52 (330)
.|+|+.||..|.... ...- |.-....|+||.||..=
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~K 46 (52)
T 1e8j_A 3 IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASK 46 (52)
T ss_dssp CEECSSSCCCCCTTTCCTTTTCCSSCCTTSSCTTCCCSSSCCCT
T ss_pred cEEeCCCCeEEcCCcCCcccCcCCCCchHHCCCCCcCCCCCCcH
Confidence 599999999997532 1111 11123479999999864
No 15
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=94.26 E-value=0.01 Score=43.06 Aligned_cols=38 Identities=13% Similarity=0.246 Sum_probs=24.6
Q ss_pred eeecCCCCccccHHH--HHhh------cCCCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALD--ALRL------VSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lD--A~~L------ld~~~~~F~C~~Cg~eL~~ 54 (330)
.|+|+.||..|.... ...- |.-....|+||.||..=..
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cga~K~~ 48 (55)
T 2v3b_B 3 KWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVGKID 48 (55)
T ss_dssp EEEETTTCCEEETTTCBTTTTBCTTCCGGGSCTTCCCTTTCCCGGG
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCCCCCCCHHH
Confidence 699999999997532 1111 1112347999999986543
No 16
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.03 E-value=0.047 Score=36.07 Aligned_cols=37 Identities=14% Similarity=0.331 Sum_probs=26.1
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNG 50 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~ 50 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|+.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k 48 (48)
T 2epr_A 9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG 48 (48)
T ss_dssp CCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred CCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence 4457999999999986666542 212234699999983
No 17
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=93.79 E-value=0.017 Score=43.96 Aligned_cols=42 Identities=21% Similarity=0.368 Sum_probs=26.5
Q ss_pred CCeeecCCCCccccHHH--HHhhc------CCCCCCeeccCCCccccccc
Q 020131 15 VQEYICPNCQRRYNALD--ALRLV------SLEDDSFHCENCNGELVAES 56 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lD--A~~Ll------d~~~~~F~C~~Cg~eL~~~~ 56 (330)
-..|+|+.||..|.... ...-| .-....|+||.||..=..+.
T Consensus 5 m~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~K~~F~ 54 (70)
T 1dx8_A 5 EGKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSPKNQFK 54 (70)
T ss_dssp SSCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCBGGGEE
T ss_pred CceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCCHHHce
Confidence 35799999999997532 11111 11124799999998754443
No 18
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=93.76 E-value=0.016 Score=49.14 Aligned_cols=30 Identities=27% Similarity=0.593 Sum_probs=24.4
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
.-.||.|+..||+.| ...|.||.|+.++..
T Consensus 27 lP~CP~C~seytYeD--------g~l~vCPeC~hEW~~ 56 (138)
T 2akl_A 27 LPPCPQCNSEYTYED--------GALLVCPECAHEWSP 56 (138)
T ss_dssp SCCCTTTCCCCCEEC--------SSSEEETTTTEEECT
T ss_pred CCCCCCCCCcceEec--------CCeEECCccccccCC
Confidence 467999999999743 246999999999953
No 19
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=93.73 E-value=0.015 Score=41.73 Aligned_cols=37 Identities=19% Similarity=0.327 Sum_probs=24.0
Q ss_pred eeecCCCCccccHHH--HHhhcC------CCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALD--ALRLVS------LEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lD--A~~Lld------~~~~~F~C~~Cg~eL~ 53 (330)
.|+|+.||..|.... ...-+. -....|+||.||..=.
T Consensus 2 ~~~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~K~ 46 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAPKS 46 (52)
T ss_dssp EEEESSSSCEEETTTCBGGGTBCTTCCGGGSCTTCBCTTTCCBGG
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCCHhHCCCCCcCCCCCCCHH
Confidence 599999999997532 111111 1134799999998643
No 20
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=93.72 E-value=0.035 Score=35.99 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=24.8
Q ss_pred CCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCC
Q 020131 15 VQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCN 49 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg 49 (330)
...|.|+.|++.|.....+.. +-...-.|.|+.||
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg 45 (45)
T 2epq_A 8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG 45 (45)
T ss_dssp CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence 357999999999986555432 11223479999997
No 21
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=93.33 E-value=0.019 Score=48.73 Aligned_cols=41 Identities=12% Similarity=0.310 Sum_probs=27.7
Q ss_pred CCCCeeecCCCCccccHHHHHhhcCCCC------------CCeeccCCCcccc
Q 020131 13 NTVQEYICPNCQRRYNALDALRLVSLED------------DSFHCENCNGELV 53 (330)
Q Consensus 13 ~~~~~Y~CP~C~~~YT~lDA~~Lld~~~------------~~F~C~~Cg~eL~ 53 (330)
.....++|++||..|+..++..-|+-.. ..+.||.||++-.
T Consensus 66 ~~p~~~~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~~~ 118 (139)
T 3a43_A 66 EEEAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHDF 118 (139)
T ss_dssp EECCEEEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCCCE
T ss_pred ecCCcEECCCCCCEEecccccccccccccccccccccccccCCcCccccCCcc
Confidence 3456899999999999876322222111 1478999998854
No 22
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.92 E-value=0.095 Score=37.08 Aligned_cols=41 Identities=22% Similarity=0.497 Sum_probs=29.0
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCccccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~~ 54 (330)
....|.|+.|++.|+....+.. +-.....|.|+.|+.....
T Consensus 6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~ 49 (70)
T 1x5w_A 6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQ 49 (70)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESS
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCC
Confidence 3467999999999996655532 2122345999999987743
No 23
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=92.90 E-value=0.097 Score=35.68 Aligned_cols=37 Identities=19% Similarity=0.647 Sum_probs=26.6
Q ss_pred eeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
.|.|+.|++.|+....+.. .-.....|.|+.|+....
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 41 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFT 41 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEES
T ss_pred cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccC
Confidence 5999999999986655542 212234699999998764
No 24
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.89 E-value=0.083 Score=37.71 Aligned_cols=40 Identities=18% Similarity=0.498 Sum_probs=28.6
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
....|.|+.|++.|+....+.. .-.....|.|+.|+....
T Consensus 11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~ 53 (72)
T 1x6e_A 11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFS 53 (72)
T ss_dssp TCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEES
T ss_pred CCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccC
Confidence 3457999999999986665542 112234699999998764
No 25
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=92.88 E-value=0.023 Score=45.05 Aligned_cols=41 Identities=17% Similarity=0.353 Sum_probs=25.7
Q ss_pred CCeeecCCCCccccHHH--HHhh------cCCCCCCeeccCCCcccccc
Q 020131 15 VQEYICPNCQRRYNALD--ALRL------VSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lD--A~~L------ld~~~~~F~C~~Cg~eL~~~ 55 (330)
...|+|+.||..|.... ...- |+-....|+||.||..=..+
T Consensus 33 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~K~~F 81 (87)
T 1s24_A 33 YLKWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGATKEDY 81 (87)
T ss_dssp CCEEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCCCGGGE
T ss_pred CceEECCCCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCCCHHHh
Confidence 35799999999997531 0100 11112479999999865443
No 26
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=92.87 E-value=0.037 Score=41.35 Aligned_cols=32 Identities=19% Similarity=0.622 Sum_probs=25.5
Q ss_pred CCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 15 VQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
...|+|..||..++.. + ....+|++||..+..
T Consensus 19 ~v~Y~C~~Cg~~~~l~-------~-~~~iRC~~CG~RILy 50 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQ-------A-KEVIRCRECGHRVMY 50 (63)
T ss_dssp CCCCBCSSSCCBCCCC-------S-SSCCCCSSSCCCCCB
T ss_pred CeEEECCCCCCeeecC-------C-CCceECCCCCcEEEE
Confidence 5689999999999832 2 246999999998865
No 27
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=92.87 E-value=0.038 Score=45.28 Aligned_cols=34 Identities=21% Similarity=0.518 Sum_probs=25.9
Q ss_pred CCCCeeecCCCCccccHHHHHhhcCCCCCCe-eccCCCcccccc
Q 020131 13 NTVQEYICPNCQRRYNALDALRLVSLEDDSF-HCENCNGELVAE 55 (330)
Q Consensus 13 ~~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F-~C~~Cg~eL~~~ 55 (330)
.....|+|..||..|... ...+ .||.||++....
T Consensus 69 ~~p~~~~C~~CG~~~e~~---------~~~~~~CP~Cgs~~~~i 103 (119)
T 2kdx_A 69 DEKVELECKDCSHVFKPN---------ALDYGVCEKCHSKNVII 103 (119)
T ss_dssp EECCEEECSSSSCEECSC---------CSTTCCCSSSSSCCCEE
T ss_pred eccceEEcCCCCCEEeCC---------CCCCCcCccccCCCcEE
Confidence 345689999999999862 1257 899999986543
No 28
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=92.84 E-value=0.081 Score=35.61 Aligned_cols=37 Identities=27% Similarity=0.635 Sum_probs=26.3
Q ss_pred eeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
.|.|+.|++.|+....+.. .-.....|.|+.|+....
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 40 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFK 40 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEES
T ss_pred CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhc
Confidence 3899999999986555532 222234699999998764
No 29
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=92.74 E-value=0.095 Score=40.32 Aligned_cols=41 Identities=17% Similarity=0.481 Sum_probs=29.2
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCccccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~~ 54 (330)
....|+|+.|++.|+....+.. +=...-.|.|+.|+.....
T Consensus 25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~ 68 (85)
T 2lv2_A 25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYS 68 (85)
T ss_dssp CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESS
T ss_pred CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCC
Confidence 3457999999999997666642 1112346999999987743
No 30
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=92.62 E-value=0.035 Score=40.18 Aligned_cols=39 Identities=23% Similarity=0.345 Sum_probs=25.4
Q ss_pred eeecCCCCccccHHH--HHhhcCC------CCCCeeccCCCcccccc
Q 020131 17 EYICPNCQRRYNALD--ALRLVSL------EDDSFHCENCNGELVAE 55 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lD--A~~Lld~------~~~~F~C~~Cg~eL~~~ 55 (330)
.|+|+.||..|.... ...-|-| ....|+||.||..-..+
T Consensus 3 ~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~dw~CP~Cg~~K~~F 49 (54)
T 4rxn_A 3 KYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVGKDEF 49 (54)
T ss_dssp CEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCBGGGE
T ss_pred ceECCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCcCCCCcHHHc
Confidence 599999999997532 1111111 23479999999875443
No 31
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=92.40 E-value=0.1 Score=35.47 Aligned_cols=39 Identities=21% Similarity=0.439 Sum_probs=27.7
Q ss_pred CCCeeecCCCCccccHHHHHhh----cCCCCCCeeccCCCccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL----VSLEDDSFHCENCNGEL 52 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L----ld~~~~~F~C~~Cg~eL 52 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|+...
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F 51 (54)
T 2eps_A 9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51 (54)
T ss_dssp SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSS
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCC
Confidence 3457999999999986665542 22233469999999754
No 32
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.26 E-value=0.14 Score=33.10 Aligned_cols=35 Identities=11% Similarity=0.231 Sum_probs=24.8
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ene_A 9 GEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp CSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred CCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence 3457999999999997666643 2112346999988
No 33
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=92.26 E-value=0.097 Score=37.44 Aligned_cols=42 Identities=19% Similarity=0.534 Sum_probs=29.4
Q ss_pred cCCCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 12 KNTVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 12 ~~~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
......|.|+.|++.|+....+.. .-.....|.|+.|+....
T Consensus 12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~ 56 (74)
T 2lce_A 12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFN 56 (74)
T ss_dssp CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEES
T ss_pred cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhC
Confidence 344568999999999986555432 111234699999998774
No 34
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.16 E-value=0.12 Score=33.38 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=24.7
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-.....|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ysp_A 9 GEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG 46 (46)
T ss_dssp SCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred CCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence 3457999999999997666542 2122346999988
No 35
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.12 E-value=0.13 Score=33.13 Aligned_cols=35 Identities=11% Similarity=0.276 Sum_probs=24.6
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eme_A 9 GEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred CCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 3457999999999997666542 2222346999988
No 36
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.10 E-value=0.15 Score=32.93 Aligned_cols=35 Identities=9% Similarity=0.215 Sum_probs=24.7
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2epz_A 9 GEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG 46 (46)
T ss_dssp CCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred CCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 3457999999999997666642 1112346999988
No 37
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.08 E-value=0.11 Score=37.44 Aligned_cols=40 Identities=20% Similarity=0.669 Sum_probs=28.3
Q ss_pred CCCeeecCCCCccccHHHHHhh-c--CCCC--CCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL-V--SLED--DSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L-l--d~~~--~~F~C~~Cg~eL~ 53 (330)
....|.|+.|++.|.....+.. + -... ..|.|+.|+....
T Consensus 12 ~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~ 56 (77)
T 2ct1_A 12 GEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIA 56 (77)
T ss_dssp CCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEES
T ss_pred CCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccC
Confidence 3457999999999997666532 1 1221 3699999998764
No 38
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=92.04 E-value=0.13 Score=39.30 Aligned_cols=39 Identities=21% Similarity=0.459 Sum_probs=26.5
Q ss_pred hhHHHHHHhhcCCCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 2 RKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 2 rk~Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
.++|+..... .|.||.|++.- +--...|.+.|..|+..+
T Consensus 16 vkkie~~q~~-----ky~C~fCgk~~-------vkR~a~GIW~C~~C~~~~ 54 (72)
T 3jyw_9 16 VKKLEIQQHA-----RYDCSFCGKKT-------VKRGAAGIWTCSCCKKTV 54 (72)
T ss_dssp THHHHHHHHS-----CBCCSSCCSSC-------BSBCSSSCBCCSSSCCCC
T ss_pred HHHHHHHhcc-----CccCCCCCCce-------eEecCCCeEECCCCCCEE
Confidence 4455554444 59999999773 112345789999999776
No 39
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.03 E-value=0.16 Score=32.80 Aligned_cols=35 Identities=11% Similarity=0.250 Sum_probs=24.9
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytn_A 9 GKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG 46 (46)
T ss_dssp CCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred CCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence 3457999999999997766643 1112346999988
No 40
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.99 E-value=0.15 Score=32.80 Aligned_cols=35 Identities=9% Similarity=0.191 Sum_probs=24.9
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-.....|.|+.|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2eop_A 9 GEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG 46 (46)
T ss_dssp CCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred CCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3457999999999997766643 1112346999988
No 41
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.90 E-value=0.11 Score=33.56 Aligned_cols=34 Identities=12% Similarity=0.182 Sum_probs=24.4
Q ss_pred CCeeecCCCCccccHHHHHhh----cCCCCCCeeccCC
Q 020131 15 VQEYICPNCQRRYNALDALRL----VSLEDDSFHCENC 48 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L----ld~~~~~F~C~~C 48 (330)
...|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C 47 (47)
T 2epx_A 10 KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG 47 (47)
T ss_dssp CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred CCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence 457999999999997766643 1122345999988
No 42
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.90 E-value=0.15 Score=33.03 Aligned_cols=35 Identities=11% Similarity=0.180 Sum_probs=24.6
Q ss_pred CCCeeecCCCCccccHHHHHhh-c-CC-CCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL-V-SL-EDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L-l-d~-~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. + .. ..-.|.|+.|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em5_A 9 STKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp CSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred CCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 3457999999999997666642 1 11 2235999988
No 43
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.87 E-value=0.15 Score=32.99 Aligned_cols=35 Identities=14% Similarity=0.242 Sum_probs=24.8
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2em7_A 9 GEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred CCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 3457999999999997666643 1122346999988
No 44
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=91.85 E-value=0.15 Score=32.77 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=24.9
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2el4_A 9 GVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred CCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 3457999999999997776643 1112346999988
No 45
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.82 E-value=0.14 Score=32.97 Aligned_cols=35 Identities=11% Similarity=0.285 Sum_probs=24.7
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ytr_A 9 GEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp SCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred CCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 3457999999999997666643 1112346999988
No 46
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.79 E-value=0.15 Score=32.99 Aligned_cols=35 Identities=11% Similarity=0.280 Sum_probs=24.7
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eml_A 9 GEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG 46 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred CCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence 3457999999999997766642 1112346999988
No 47
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.76 E-value=0.14 Score=33.24 Aligned_cols=35 Identities=20% Similarity=0.410 Sum_probs=24.8
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-.....|.|+.|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2elz_A 9 VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG 46 (46)
T ss_dssp CCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred CCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 3457999999999997666642 1112346999988
No 48
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.67 E-value=0.27 Score=37.52 Aligned_cols=49 Identities=12% Similarity=0.369 Sum_probs=32.3
Q ss_pred HHHHHhhcCCCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 5 LKDELECKNTVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
|..-++.-.....|.|+.|++.|.....+.. +-.....|.|+.|+....
T Consensus 25 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 76 (110)
T 2csh_A 25 RDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFM 76 (110)
T ss_dssp HHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEES
T ss_pred HHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhc
Confidence 4444444445567999999999986555432 222234699999998764
No 49
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=91.64 E-value=0.081 Score=35.61 Aligned_cols=38 Identities=16% Similarity=0.425 Sum_probs=25.9
Q ss_pred CeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 16 QEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
..|.|+.|++.|+....+.. +-.....|.|+.|+....
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 43 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAA 43 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEES
T ss_pred CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhC
Confidence 46999999999986665532 111223699999998764
No 50
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.60 E-value=0.19 Score=32.42 Aligned_cols=35 Identities=11% Similarity=0.208 Sum_probs=24.8
Q ss_pred CCCeeecCCCCccccHHHHHhh--cCC-CCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL--VSL-EDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L--ld~-~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. ... ..-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2eq0_A 9 GEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG 46 (46)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3457999999999997766642 111 2346999988
No 51
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.58 E-value=0.15 Score=32.86 Aligned_cols=35 Identities=11% Similarity=0.224 Sum_probs=24.6
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eq4_A 9 GEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG 46 (46)
T ss_dssp CCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred CCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence 3457999999999997666542 1122346999988
No 52
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=91.57 E-value=0.093 Score=36.51 Aligned_cols=39 Identities=21% Similarity=0.477 Sum_probs=28.3
Q ss_pred CCeeecCCCCccccHHHHHhh---c-C-CCCCCeeccCCCcccc
Q 020131 15 VQEYICPNCQRRYNALDALRL---V-S-LEDDSFHCENCNGELV 53 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---l-d-~~~~~F~C~~Cg~eL~ 53 (330)
...|.|+.|++.|+....+.. . - .....|.|+.|+....
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~ 51 (66)
T 2drp_A 8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFT 51 (66)
T ss_dssp TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEES
T ss_pred CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccC
Confidence 457999999999996665532 1 1 2335699999998764
No 53
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.54 E-value=0.19 Score=32.32 Aligned_cols=35 Identities=17% Similarity=0.379 Sum_probs=24.5
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2en8_A 9 GEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG 46 (46)
T ss_dssp CCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred CCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 3457999999999997666542 1112346999988
No 54
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=91.53 E-value=0.21 Score=37.01 Aligned_cols=49 Identities=22% Similarity=0.541 Sum_probs=29.3
Q ss_pred HHHHHhhcCCCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 5 LKDELECKNTVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
|..-++.-.....|.|+.|++.|.....+.. .-.....|.|+.|+....
T Consensus 24 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 75 (96)
T 2dmd_A 24 LKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASR 75 (96)
T ss_dssp HHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEES
T ss_pred HHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccC
Confidence 4444444445567888888888875554432 112233588888887663
No 55
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=91.48 E-value=0.17 Score=32.57 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=24.7
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em9_A 9 GEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred CCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence 3457999999999997666642 1122346999988
No 56
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.47 E-value=0.19 Score=32.53 Aligned_cols=35 Identities=11% Similarity=0.256 Sum_probs=24.6
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytq_A 9 GEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG 46 (46)
T ss_dssp CCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred CCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence 3456999999999997666642 2112346999988
No 57
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.41 E-value=0.18 Score=32.58 Aligned_cols=34 Identities=12% Similarity=0.303 Sum_probs=24.4
Q ss_pred CCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 15 VQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
...|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ep0_A 10 EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred CCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence 457999999999997766643 1112245999988
No 58
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.36 E-value=0.2 Score=35.98 Aligned_cols=40 Identities=15% Similarity=0.610 Sum_probs=28.3
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
....|.|+.|++.|.....+.. +-.....|.|+.|+....
T Consensus 15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 57 (77)
T 2cot_A 15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFI 57 (77)
T ss_dssp CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEES
T ss_pred CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccC
Confidence 3467999999999986555532 212234699999998764
No 59
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.35 E-value=0.16 Score=32.84 Aligned_cols=35 Identities=14% Similarity=0.311 Sum_probs=24.8
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-.....|.|+.|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2en1_A 9 GEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp CCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3457999999999997666642 1122346999988
No 60
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.28 E-value=0.2 Score=32.31 Aligned_cols=35 Identities=11% Similarity=0.299 Sum_probs=24.9
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2ep2_A 9 GEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred CCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 3457999999999997776643 1112346999988
No 61
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=91.28 E-value=0.17 Score=32.66 Aligned_cols=35 Identities=17% Similarity=0.372 Sum_probs=24.7
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em0_A 9 GEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG 46 (46)
T ss_dssp CCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred CCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence 3457999999999997666643 1112346999988
No 62
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.20 E-value=0.17 Score=32.55 Aligned_cols=34 Identities=12% Similarity=0.247 Sum_probs=23.9
Q ss_pred CCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 15 VQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
...|.|+.|++.|+....+.. +-.....|.|+.|
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2epw_A 10 EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG 46 (46)
T ss_dssp CCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred CCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 456999999999997666542 2122346999988
No 63
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.20 E-value=0.16 Score=32.70 Aligned_cols=35 Identities=11% Similarity=0.188 Sum_probs=25.0
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eoe_A 9 GEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG 46 (46)
T ss_dssp CCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred CCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3457999999999997766643 1122346999988
No 64
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=91.17 E-value=0.29 Score=36.97 Aligned_cols=49 Identities=20% Similarity=0.524 Sum_probs=29.2
Q ss_pred HHHHHhhcCCCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 5 LKDELECKNTVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
|..-++.-.....|.|+.|++.|.....+.. +-.....|.|+.|+....
T Consensus 33 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 84 (106)
T 2ee8_A 33 LLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFC 84 (106)
T ss_dssp HHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCS
T ss_pred HHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCccc
Confidence 3333444444567888888888875555432 112233588888887653
No 65
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.13 E-value=0.2 Score=32.34 Aligned_cols=35 Identities=9% Similarity=0.304 Sum_probs=24.5
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-.....|.|+.|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2emf_A 9 GGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp SSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred CCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 3457999999999997666642 1112346999987
No 66
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.13 E-value=0.1 Score=40.33 Aligned_cols=38 Identities=24% Similarity=0.603 Sum_probs=26.5
Q ss_pred CCeeecCCCCccc-cHHHHHh---hcCCCCCCeeccCCCcccc
Q 020131 15 VQEYICPNCQRRY-NALDALR---LVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 15 ~~~Y~CP~C~~~Y-T~lDA~~---Lld~~~~~F~C~~Cg~eL~ 53 (330)
...|.|+.|++.| +....+. .+- ....|.|..||....
T Consensus 32 ~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~ 73 (96)
T 2ctd_A 32 KGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLR 73 (96)
T ss_dssp TSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCS
T ss_pred CCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeC
Confidence 3579999999999 6433332 111 334799999998774
No 67
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.10 E-value=0.17 Score=32.64 Aligned_cols=35 Identities=11% Similarity=0.220 Sum_probs=24.7
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-.....|.|+.|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2eoq_A 9 GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG 46 (46)
T ss_dssp SSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred CCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3457999999999997666542 1122346999988
No 68
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=91.04 E-value=0.1 Score=37.55 Aligned_cols=39 Identities=18% Similarity=0.456 Sum_probs=27.6
Q ss_pred CeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCccccc
Q 020131 16 QEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~~ 54 (330)
..|.|+.|++.|+..-.+.. +=...-.|.|+.||.....
T Consensus 3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~ 44 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRD 44 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESS
T ss_pred CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCC
Confidence 36999999999996555532 1112336999999988754
No 69
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=91.04 E-value=0.19 Score=32.50 Aligned_cols=35 Identities=14% Similarity=0.342 Sum_probs=24.5
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2el6_A 9 GVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3456999999999997666642 1112346999988
No 70
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.95 E-value=0.15 Score=32.94 Aligned_cols=35 Identities=17% Similarity=0.278 Sum_probs=24.8
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytg_A 9 GEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp SCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3457999999999997666643 1112346999988
No 71
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.92 E-value=0.14 Score=32.92 Aligned_cols=34 Identities=15% Similarity=0.343 Sum_probs=23.9
Q ss_pred CCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 15 VQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
...|.|+.|++.|+....+.. +-.....|.|+.|
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eov_A 10 EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG 46 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred CCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 456999999999997666542 1112246999988
No 72
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.87 E-value=0.19 Score=32.43 Aligned_cols=35 Identities=6% Similarity=0.122 Sum_probs=24.6
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-.....|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2enc_A 9 GEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred CCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence 3457999999999997666642 1122346999988
No 73
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=90.85 E-value=0.18 Score=32.50 Aligned_cols=35 Identities=11% Similarity=0.272 Sum_probs=24.6
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2ema_A 9 GEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp TSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred CCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 3457999999999997666642 1112346999988
No 74
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=90.80 E-value=0.28 Score=37.82 Aligned_cols=49 Identities=20% Similarity=0.448 Sum_probs=30.2
Q ss_pred HHHHHhhcCCCCeeecCCCCccccHHHHHhh------cCCCCCCeeccCCCcccc
Q 020131 5 LKDELECKNTVQEYICPNCQRRYNALDALRL------VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~L------ld~~~~~F~C~~Cg~eL~ 53 (330)
|..-++.-.....|.|+.|++.|.....+.. +......|.|+.|+....
T Consensus 23 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~ 77 (124)
T 2dlq_A 23 LKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFR 77 (124)
T ss_dssp HHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEES
T ss_pred HHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccC
Confidence 3333333344457888888888876555532 123345688888887763
No 75
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=90.66 E-value=0.12 Score=37.56 Aligned_cols=33 Identities=15% Similarity=0.334 Sum_probs=25.3
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~ 55 (330)
..+||.|+..= -.+|+..+..+|..||..|.+.
T Consensus 11 ~~~Cp~C~~~~------lv~D~~~ge~vC~~CGlVl~e~ 43 (58)
T 1dl6_A 11 RVTCPNHPDAI------LVEDYRAGDMICPECGLVVGDR 43 (58)
T ss_dssp CCSBTTBSSSC------CEECSSSCCEECTTTCCEECCS
T ss_pred cccCcCCCCCc------eeEeCCCCeEEeCCCCCEEecc
Confidence 45899998731 1357788999999999998654
No 76
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.57 E-value=0.16 Score=32.79 Aligned_cols=35 Identities=11% Similarity=0.185 Sum_probs=24.4
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emy_A 9 GENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG 46 (46)
T ss_dssp SSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred CCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence 3457999999999997666542 1112346999988
No 77
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.56 E-value=0.17 Score=32.60 Aligned_cols=34 Identities=9% Similarity=0.122 Sum_probs=23.8
Q ss_pred CCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 15 VQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
...|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2yso_A 10 EKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG 46 (46)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred CCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 457999999999997665542 1112236999988
No 78
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.48 E-value=0.16 Score=32.44 Aligned_cols=35 Identities=11% Similarity=0.273 Sum_probs=24.6
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-.....|.|+.|
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 44 (44)
T 2emx_A 7 GEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG 44 (44)
T ss_dssp SCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred CCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 3457999999999997666642 1112346999988
No 79
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=90.48 E-value=0.11 Score=43.20 Aligned_cols=30 Identities=23% Similarity=0.666 Sum_probs=21.1
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
..|.||.|++. + +... ..+.+.|..|+..+
T Consensus 59 akytCPfCGk~-~---vKR~---avGIW~C~~Cgk~f 88 (116)
T 3cc2_Z 59 EDHACPNCGED-R---VDRQ---GTGIWQCSYCDYKF 88 (116)
T ss_dssp SCEECSSSCCE-E---EEEE---ETTEEEETTTCCEE
T ss_pred cCCcCCCCCCc-e---eEec---CceeEECCCCCCEE
Confidence 36999999982 1 1111 23789999999885
No 80
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=90.43 E-value=0.17 Score=32.74 Aligned_cols=35 Identities=11% Similarity=0.296 Sum_probs=23.9
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ely_A 9 GEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG 46 (46)
T ss_dssp CCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred CCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3457999999999996555532 1112246999988
No 81
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.39 E-value=0.16 Score=32.66 Aligned_cols=35 Identities=9% Similarity=0.129 Sum_probs=24.5
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emm_A 9 GERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred CCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 3457999999999997666542 1112346999988
No 82
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.37 E-value=0.14 Score=33.01 Aligned_cols=35 Identities=11% Similarity=0.239 Sum_probs=24.7
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2en6_A 9 GEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG 46 (46)
T ss_dssp SSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred CCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence 3457999999999997666643 1112346999988
No 83
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.34 E-value=0.22 Score=32.08 Aligned_cols=34 Identities=15% Similarity=0.343 Sum_probs=24.2
Q ss_pred CCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 15 VQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
...|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2ytj_A 10 EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG 46 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred CcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 457999999999997766643 1122346999987
No 84
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=90.24 E-value=0.17 Score=32.71 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=24.4
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emk_A 9 GEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp SSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred CCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3456999999999997666642 1112346999988
No 85
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=90.22 E-value=0.33 Score=42.24 Aligned_cols=62 Identities=18% Similarity=0.164 Sum_probs=46.8
Q ss_pred eecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccchhhhhhcCCCCChhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 020131 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQI 97 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~~~~~~e~~~g~~na~r~~~e~~k~~l~r~n~QlkpI~~~L 97 (330)
-.||.||+.|.. .++|....-.|+.|+.+|+...+. .++.++.++..|..+..||++.+
T Consensus 133 ~~~~~~g~~y~~-----~~~pp~~~~~~~~~~~~l~~~~dd----------------~~e~v~~r~~~~~~~~~~l~~~y 191 (217)
T 3be4_A 133 CTHPASGRIYHV-----KYNPPKQPGIDDVTGEPLVWRDDD----------------NAEAVKVRLDVFHKQTAPLVKFY 191 (217)
T ss_dssp EECTTTCCEEET-----TTBCCSSTTBCTTTCCBCBCCGGG----------------SHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCCccccCcccc-----ccCCCCccccccccccccccCCCC----------------CHHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999976 356665566899999999765432 12456778888999999999888
Q ss_pred Hhh
Q 020131 98 NRV 100 (330)
Q Consensus 98 k~i 100 (330)
++.
T Consensus 192 ~~~ 194 (217)
T 3be4_A 192 EDL 194 (217)
T ss_dssp HTT
T ss_pred HhC
Confidence 753
No 86
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.01 E-value=0.2 Score=32.33 Aligned_cols=34 Identities=12% Similarity=0.243 Sum_probs=24.1
Q ss_pred CCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 15 VQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
...|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ytd_A 10 EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG 46 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred CcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence 457999999999997666542 1112346999988
No 87
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.99 E-value=0.18 Score=32.58 Aligned_cols=35 Identities=11% Similarity=0.245 Sum_probs=24.3
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c 46 (46)
T 2ytk_A 9 GEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG 46 (46)
T ss_dssp SSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred CCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence 3457999999999997666542 1112246999988
No 88
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.92 E-value=0.087 Score=38.02 Aligned_cols=39 Identities=18% Similarity=0.299 Sum_probs=27.6
Q ss_pred CCeeecCCCCccccHHHHHhh-cC-C----CCCCeeccCCCcccc
Q 020131 15 VQEYICPNCQRRYNALDALRL-VS-L----EDDSFHCENCNGELV 53 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L-ld-~----~~~~F~C~~Cg~eL~ 53 (330)
...|.|+.|++.|+....+.. +. . ....|.|+.|+....
T Consensus 5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~ 49 (78)
T 2d9h_A 5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFE 49 (78)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEES
T ss_pred CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhC
Confidence 457999999999986655532 10 1 124699999998764
No 89
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.64 E-value=0.16 Score=32.93 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=24.2
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em8_A 9 GEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG 46 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred CCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence 3457999999999997666542 1112235999988
No 90
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=89.55 E-value=0.17 Score=36.12 Aligned_cols=45 Identities=16% Similarity=0.526 Sum_probs=29.5
Q ss_pred HhhcCCCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 9 LECKNTVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 9 l~~~~~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
++.-.....|.|+.|++.|+....+.. .-.....|.|+.|+....
T Consensus 21 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 68 (82)
T 2kmk_A 21 LLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFS 68 (82)
T ss_dssp HHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEES
T ss_pred HHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhC
Confidence 333334567999999999986655532 111234699999997663
No 91
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=89.49 E-value=0.21 Score=45.56 Aligned_cols=38 Identities=26% Similarity=0.724 Sum_probs=28.8
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~ 55 (330)
...|..|++.|...++...++.. ..-+|+.||+.|..+
T Consensus 121 ~~~C~~C~~~~~~~~~~~~~~~~-~~p~C~~Cgg~lrP~ 158 (246)
T 1yc5_A 121 EYYCVRCEKKYTVEDVIKKLESS-DVPLCDDCNSLIRPN 158 (246)
T ss_dssp EEEETTTCCEEEHHHHHHHTTTC-SSCBCTTTCCBEEEE
T ss_pred eeEcCCCCCCCcHHHHHHHhccC-CCCCCCCCCCccCcc
Confidence 46799999999987777655421 246999999998654
No 92
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=89.43 E-value=0.19 Score=39.59 Aligned_cols=37 Identities=22% Similarity=0.513 Sum_probs=24.2
Q ss_pred eeecCCCCccccHHHHHh-hcCC-----------------CCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALR-LVSL-----------------EDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~-Lld~-----------------~~~~F~C~~Cg~eL~ 53 (330)
.-+||.||+...-.|-.. .|.. ..-.|+||.||.+.-
T Consensus 8 ~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFy 62 (95)
T 2k5c_A 8 MAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFY 62 (95)
T ss_dssp CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEE
T ss_pred cccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHh
Confidence 358999999776444332 1211 134699999999874
No 93
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.30 E-value=0.17 Score=32.72 Aligned_cols=35 Identities=14% Similarity=0.242 Sum_probs=24.4
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2eoo_A 9 GERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG 46 (46)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred CCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence 3457999999999997666642 1112246999988
No 94
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=89.28 E-value=0.27 Score=36.34 Aligned_cols=48 Identities=19% Similarity=0.492 Sum_probs=29.7
Q ss_pred HHHHHhhcCCCCeeecCCCCccccHHHHHhh---c-CCC-CCCeeccCCCccc
Q 020131 5 LKDELECKNTVQEYICPNCQRRYNALDALRL---V-SLE-DDSFHCENCNGEL 52 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~L---l-d~~-~~~F~C~~Cg~eL 52 (330)
|..-++.-.....|.|+.|++.|.....+.. . ... ...|.|+.|+...
T Consensus 23 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f 75 (95)
T 2yt9_A 23 LNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGF 75 (95)
T ss_dssp HHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCB
T ss_pred HHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchh
Confidence 3344444445567999999999986555532 1 111 1469999998765
No 95
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=89.26 E-value=0.19 Score=36.63 Aligned_cols=45 Identities=18% Similarity=0.526 Sum_probs=28.8
Q ss_pred HhhcCCCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 9 LECKNTVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 9 l~~~~~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
++.-.....|.|+.|++.|+....+.. .-.....|.|+.|+....
T Consensus 26 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 73 (90)
T 1a1h_A 26 IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA 73 (90)
T ss_dssp HHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred HHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhC
Confidence 333334557999999999986655532 111224599999997764
No 96
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.23 E-value=0.16 Score=32.73 Aligned_cols=35 Identities=11% Similarity=0.175 Sum_probs=24.4
Q ss_pred CCCeeecCCCCccccHHHHHhhc---CCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRLV---SLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~Ll---d~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+..- -...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2yu8_A 9 GEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG 46 (46)
T ss_dssp CCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred CCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 34579999999999976665431 112246999988
No 97
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=89.15 E-value=0.29 Score=35.35 Aligned_cols=40 Identities=18% Similarity=0.597 Sum_probs=28.0
Q ss_pred CCCeeecCCCCccccHHHHHhh-c--CCCC----CCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL-V--SLED----DSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L-l--d~~~----~~F~C~~Cg~eL~ 53 (330)
....|.|+.|++.|.....+.. + -... ..|.|+.|+....
T Consensus 12 ~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~ 58 (86)
T 1x6h_A 12 GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFT 58 (86)
T ss_dssp CCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEES
T ss_pred CCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhC
Confidence 3457999999999987665532 1 1111 3599999998774
No 98
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.08 E-value=0.17 Score=32.83 Aligned_cols=35 Identities=9% Similarity=0.184 Sum_probs=24.2
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ytm_A 9 GEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG 46 (46)
T ss_dssp SCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred CCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3457999999999997666542 1111236999988
No 99
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.04 E-value=0.18 Score=32.53 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=24.4
Q ss_pred CCCeeecCCCCccccHHHHHhhc---CCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRLV---SLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~Ll---d~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+..- -...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2emh_A 9 GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred CCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 34579999999999977666431 112236999988
No 100
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.81 E-value=0.42 Score=30.70 Aligned_cols=35 Identities=11% Similarity=0.201 Sum_probs=24.1
Q ss_pred CCCeeecCCCCccccHHHHHhh-c-CC-CCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL-V-SL-EDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L-l-d~-~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. + .. ..-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~ 46 (46)
T 2ep3_A 9 GEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3457999999999997766643 1 11 2235899876
No 101
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.72 E-value=0.2 Score=32.33 Aligned_cols=35 Identities=14% Similarity=0.421 Sum_probs=24.3
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emp_A 9 GVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred CCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 3457999999999997666642 1112236999988
No 102
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.60 E-value=0.063 Score=41.08 Aligned_cols=41 Identities=24% Similarity=0.611 Sum_probs=26.6
Q ss_pred CCCCeeecCCCCcccc-HHHHHhh---cCCC-CCCeeccCCCcccc
Q 020131 13 NTVQEYICPNCQRRYN-ALDALRL---VSLE-DDSFHCENCNGELV 53 (330)
Q Consensus 13 ~~~~~Y~CP~C~~~YT-~lDA~~L---ld~~-~~~F~C~~Cg~eL~ 53 (330)
.....|.|+.|++.|. ....+.. +-.. ...|.|+.|+....
T Consensus 20 ~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~ 65 (98)
T 2gqj_A 20 HERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFK 65 (98)
T ss_dssp TTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCS
T ss_pred ccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccC
Confidence 3456799999999998 4333321 1000 12599999998764
No 103
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=88.39 E-value=0.15 Score=40.02 Aligned_cols=29 Identities=21% Similarity=0.778 Sum_probs=21.6
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
-|.||.|++.- +.- ...|.+.|..|+..+
T Consensus 35 ky~CpfCGk~~-----vkR--~a~GIW~C~kCg~~~ 63 (83)
T 3j21_i 35 KHTCPVCGRKA-----VKR--ISTGIWQCQKCGATF 63 (83)
T ss_dssp CBCCSSSCSSC-----EEE--EETTEEEETTTCCEE
T ss_pred ccCCCCCCCce-----eEe--cCcCeEEcCCCCCEE
Confidence 59999999873 111 234789999999876
No 104
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=87.90 E-value=0.47 Score=34.97 Aligned_cols=40 Identities=13% Similarity=0.345 Sum_probs=28.2
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
....|.|+.|++.|.....+.. .-.....|.|+.|+....
T Consensus 4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 46 (95)
T 2yt9_A 4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFK 46 (95)
T ss_dssp CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEES
T ss_pred CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccC
Confidence 4467999999999985554432 222234699999998774
No 105
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=87.80 E-value=0.57 Score=34.57 Aligned_cols=40 Identities=15% Similarity=0.424 Sum_probs=28.6
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
....|.|+.|++.|.....+.. .-.....|.|+.|+....
T Consensus 5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 47 (96)
T 2dmd_A 5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAA 47 (96)
T ss_dssp CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEES
T ss_pred CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccC
Confidence 3457999999999986665532 112234699999998774
No 106
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=87.69 E-value=0.31 Score=45.57 Aligned_cols=39 Identities=15% Similarity=0.304 Sum_probs=28.0
Q ss_pred eeecCCCCccccHHHHHhhcCC--CCCCeeccCCCcccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSL--EDDSFHCENCNGELVAE 55 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~--~~~~F~C~~Cg~eL~~~ 55 (330)
...|..|++.|...+....+.. ....-+|+.||+.|..+
T Consensus 136 ~~~C~~C~~~~~~~~~~~~~~~~~~~~~P~C~~Cgg~lrP~ 176 (289)
T 1q1a_A 136 HCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPA 176 (289)
T ss_dssp EEEETTTCCEECHHHHHHHHTCSSCCSCCBCTTTCCBEEEE
T ss_pred ceEECCCCCCCcHHHHHHHHhhccCCCCccCCCCCCEECCC
Confidence 4679999999998776654432 11235999999998654
No 107
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.60 E-value=0.16 Score=32.84 Aligned_cols=35 Identities=11% Similarity=0.226 Sum_probs=24.2
Q ss_pred CCCeeecCCCCccccHHHHHhhc-C--CCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRLV-S--LEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~Ll-d--~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+..- - ...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytt_A 9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG 46 (46)
T ss_dssp CCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 34569999999999976666431 1 11235999988
No 108
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=87.51 E-value=0.2 Score=40.00 Aligned_cols=29 Identities=21% Similarity=0.525 Sum_probs=21.5
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
-|.||.|++.- +-+ ...|.+.|..|+..+
T Consensus 36 ky~CpfCgk~~----vkR---~a~GIW~C~~Cg~~~ 64 (92)
T 3iz5_m 36 KYFCEFCGKFA----VKR---KAVGIWGCKDCGKVK 64 (92)
T ss_dssp CBCCTTTCSSC----BEE---EETTEEECSSSCCEE
T ss_pred cccCcccCCCe----eEe---cCcceEEcCCCCCEE
Confidence 59999999873 111 234789999999776
No 109
>1dxg_A Desulforedoxin; non-heme iron protein, rubredoxin type metal center, electron transport; 1.80A {Desulfovibrio gigas} SCOP: g.41.5.2 PDB: 1dcd_A 1dhg_A 1cfw_A 2lk5_A 2lk6_A
Probab=87.32 E-value=0.075 Score=35.05 Aligned_cols=31 Identities=23% Similarity=0.570 Sum_probs=21.8
Q ss_pred CCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 15 VQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
.++|+|+.||.....+ ..-.+.+.| ||.+|.
T Consensus 4 ~~fY~C~~CGnivev~------~~g~~~l~C--CG~~M~ 34 (36)
T 1dxg_A 4 GDVYKCELCGQVVKVL------EEGGGTLVC--CGEDMV 34 (36)
T ss_dssp TCEEECTTTCCEEEEE------ECCSSCEEE--TTEECE
T ss_pred ccEEEcCCCCcEEEEE------eCCCcCEEe--CCcccC
Confidence 4699999999877642 223357788 888775
No 110
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.24 E-value=0.4 Score=30.91 Aligned_cols=35 Identities=9% Similarity=0.197 Sum_probs=23.6
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
....|.|+.|++.|+....+.. +-...-.|.|+.|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~ 46 (46)
T 2em2_A 9 GEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred CCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 3457999999999997665542 1112235899876
No 111
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=87.20 E-value=0.52 Score=40.68 Aligned_cols=61 Identities=15% Similarity=0.162 Sum_probs=45.4
Q ss_pred eecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccchhhhhhcCCCCChhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 020131 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQI 97 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~~~~~~e~~~g~~na~r~~~e~~k~~l~r~n~QlkpI~~~L 97 (330)
-.||.|+..|.. .+.|....-.|+.|+.+|....+.. .+.++.++..+..+..||++..
T Consensus 124 ~~~~~~g~~~~~-----~~~pp~~~~~~~~~~~~l~~r~dd~----------------~~~~~~rl~~y~~~~~~l~~~~ 182 (214)
T 1e4v_A 124 RVHAPSGRVYHV-----KFNPPKVEGKDDVTGEELTTRKDDQ----------------EETVRKRLVEYHQMTAPLIGYY 182 (214)
T ss_dssp EEETTTTEEEET-----TTBCCSSTTBCTTTCCBCBCCTTCS----------------HHHHHHHHHHHHHHTTHHHHHH
T ss_pred cccCCcCCcccc-----cCCCCCccccccccccccccCCCCC----------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 359999999986 4566655668999999997654421 1345677788999999999988
Q ss_pred Hh
Q 020131 98 NR 99 (330)
Q Consensus 98 k~ 99 (330)
++
T Consensus 183 ~~ 184 (214)
T 1e4v_A 183 SK 184 (214)
T ss_dssp HH
T ss_pred Hh
Confidence 74
No 112
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=87.09 E-value=0.36 Score=38.26 Aligned_cols=44 Identities=25% Similarity=0.397 Sum_probs=30.2
Q ss_pred hcCCCCeeecCCCCccccHHHHHhh-c-C-C----CCCCeeccCCCccccc
Q 020131 11 CKNTVQEYICPNCQRRYNALDALRL-V-S-L----EDDSFHCENCNGELVA 54 (330)
Q Consensus 11 ~~~~~~~Y~CP~C~~~YT~lDA~~L-l-d-~----~~~~F~C~~Cg~eL~~ 54 (330)
+.+....|.|+.|++.|+....+.. + . . ..-.|.|+.||.....
T Consensus 12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~ 62 (102)
T 2ghf_A 12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62 (102)
T ss_dssp CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESS
T ss_pred cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCC
Confidence 3455678999999999986555432 1 1 1 1236999999987743
No 113
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=86.90 E-value=0.19 Score=40.89 Aligned_cols=29 Identities=24% Similarity=0.618 Sum_probs=21.3
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
.|.||.|++.- +-+ ...|.+.|..|+..+
T Consensus 36 ky~CpfCgk~~----vKR---~a~GIW~C~kCg~~~ 64 (103)
T 4a17_Y 36 KYGCPFCGKVA----VKR---AAVGIWKCKPCKKII 64 (103)
T ss_dssp CEECTTTCCEE----EEE---EETTEEEETTTTEEE
T ss_pred CCCCCCCCCce----eee---cCcceEEcCCCCCEE
Confidence 69999999763 111 124789999999776
No 114
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=86.38 E-value=0.33 Score=35.80 Aligned_cols=37 Identities=22% Similarity=0.620 Sum_probs=25.8
Q ss_pred eeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
.|.|+.|++.|+....+.. .-.....|.|+.|+....
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~ 42 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA 42 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred CCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccC
Confidence 5999999999986555432 111224699999998764
No 115
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=86.05 E-value=0.33 Score=42.52 Aligned_cols=60 Identities=18% Similarity=0.273 Sum_probs=42.2
Q ss_pred ecCC-CCccccHHHHHhhcCCCCCCe-eccCCCccccccchhhhhhcCCCCChhHHHHHHH-HHHHHHHHHHHhHHHHHH
Q 020131 19 ICPN-CQRRYNALDALRLVSLEDDSF-HCENCNGELVAESDKLAAQEGGDGDDNARRRRRE-KLKDLLQKLEVHLKPLME 95 (330)
Q Consensus 19 ~CP~-C~~~YT~lDA~~Lld~~~~~F-~C~~Cg~eL~~~~~~~~~~e~~~g~~na~r~~~e-~~k~~l~r~n~QlkpI~~ 95 (330)
.||. ||..|... ++|....- .|+.||.+|+...++. .+ .++.+|..|..++.||++
T Consensus 128 ~~~~~~g~~y~~~-----~~~p~~~~~~~~~~~~~l~~r~dd~----------------~e~~i~~rl~~~~~~~~p~~~ 186 (223)
T 2xb4_A 128 ICKNNPNHPNNIF-----IDAIKPNGDVCRVCGGALSARADDQ----------------DEGAINKRHDIYYNTVDGTLA 186 (223)
T ss_dssp EESSCTTSCCBTT-----CGGGCCBTTBCTTTCCBEECCGGGG----------------CHHHHHHHHHHHTCTTTSHHH
T ss_pred CCccccCCccccc-----cCCCccccccccccccccccCCCCC----------------HHHHHHHHHHHHHHhHHHHHh
Confidence 5887 99999862 44433333 8999999998654321 13 456778889999988888
Q ss_pred ---HHHh
Q 020131 96 ---QINR 99 (330)
Q Consensus 96 ---~Lk~ 99 (330)
.+.+
T Consensus 187 ~~~~y~~ 193 (223)
T 2xb4_A 187 AAYYYKN 193 (223)
T ss_dssp HHHHHHT
T ss_pred hHHHHhh
Confidence 7665
No 116
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=85.82 E-value=0.51 Score=35.61 Aligned_cols=40 Identities=23% Similarity=0.625 Sum_probs=28.3
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
....|.|+.|++.|.....+.. .-.....|.|+.|+....
T Consensus 14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 56 (106)
T 2ee8_A 14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFR 56 (106)
T ss_dssp CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCS
T ss_pred CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhC
Confidence 4567999999999986555532 112234699999998774
No 117
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=85.77 E-value=0.42 Score=46.47 Aligned_cols=39 Identities=15% Similarity=0.330 Sum_probs=27.8
Q ss_pred eeecCCCCccccHHHHHhhcCCC--CCCeeccCCCcccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLE--DDSFHCENCNGELVAE 55 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~--~~~F~C~~Cg~eL~~~ 55 (330)
...|..|++.|...+....+... ...-+|+.||+.|..+
T Consensus 144 ~~~C~~C~~~~~~~~~~~~~~~~~~~~~P~Cp~Cgg~lrP~ 184 (361)
T 1q14_A 144 HCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPA 184 (361)
T ss_dssp EEEETTTCCEECTHHHHHHTTSSSCSCCCBCTTTCCBEEEE
T ss_pred ccCcCCCCccCcHHHHHHHHhhcccCCCCCCcCCCCEeCCC
Confidence 46799999999976665544331 1135999999998654
No 118
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=85.76 E-value=0.37 Score=37.09 Aligned_cols=40 Identities=18% Similarity=0.522 Sum_probs=28.7
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
....|.|+.|++.|.....+.. .-.....|.|+.|+....
T Consensus 4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 46 (124)
T 2dlq_A 4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYF 46 (124)
T ss_dssp CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCS
T ss_pred CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhc
Confidence 4567999999999986665542 112234699999998763
No 119
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=85.66 E-value=0.4 Score=34.28 Aligned_cols=26 Identities=19% Similarity=0.552 Sum_probs=21.2
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
..++||.|+++ + .++...|..||...
T Consensus 13 ~k~iCpkC~a~---------~--~~gaw~CrKCG~~~ 38 (51)
T 3j21_g 13 KKYVCLRCGAT---------N--PWGAKKCRKCGYKR 38 (51)
T ss_dssp SEEECTTTCCE---------E--CTTCSSCSSSSSCC
T ss_pred CCccCCCCCCc---------C--CCCceecCCCCCcc
Confidence 46999999998 1 23689999999884
No 120
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=85.65 E-value=1.3 Score=35.15 Aligned_cols=13 Identities=31% Similarity=0.577 Sum_probs=10.7
Q ss_pred CeeccCCCccccc
Q 020131 42 SFHCENCNGELVA 54 (330)
Q Consensus 42 ~F~C~~Cg~eL~~ 54 (330)
+-.||.||.+|..
T Consensus 47 g~~CPvCgs~l~~ 59 (112)
T 1l8d_A 47 KGKCPVCGRELTD 59 (112)
T ss_dssp SEECTTTCCEECH
T ss_pred CCCCCCCCCcCCH
Confidence 5689999999964
No 121
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.63 E-value=0.056 Score=37.93 Aligned_cols=36 Identities=17% Similarity=0.356 Sum_probs=26.9
Q ss_pred CCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
....|.|+.|++.|.....+.. ...|.|+.||....
T Consensus 15 ~~~~~~C~~C~k~f~~~~~l~~----~~~~~C~~C~~~f~ 50 (73)
T 2ctu_A 15 GDRSQKCSKCGIIFIRRSTLSR----RKTPMCEKCRKDSC 50 (73)
T ss_dssp CCSEEECSSSCCEEECCCCCCC----SSSCCCHHHHHTCS
T ss_pred CCCCeeCCcccchhCCHHHhCc----CCCCCCCCCChhhc
Confidence 4467999999999986544443 34799999987653
No 122
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=85.41 E-value=0.42 Score=33.70 Aligned_cols=39 Identities=28% Similarity=0.778 Sum_probs=26.9
Q ss_pred CCeeecC--CCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 15 VQEYICP--NCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 15 ~~~Y~CP--~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
...|.|+ .|++.|+....+.. .-.....|.|+.||....
T Consensus 17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 60 (73)
T 1f2i_G 17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60 (73)
T ss_dssp CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhC
Confidence 4579998 69999986555532 111234699999998764
No 123
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=85.31 E-value=0.19 Score=39.62 Aligned_cols=38 Identities=18% Similarity=0.567 Sum_probs=27.4
Q ss_pred CCeeecCCCCccccHHHHHhh--cCCCCCCeeccCCCcccc
Q 020131 15 VQEYICPNCQRRYNALDALRL--VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L--ld~~~~~F~C~~Cg~eL~ 53 (330)
...|.|+.|++.|.....+.. ... ...|.|+.||....
T Consensus 72 ~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~ 111 (129)
T 2wbt_A 72 ISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFT 111 (129)
T ss_dssp HCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCS
T ss_pred CCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccC
Confidence 356999999999986655532 111 34699999998764
No 124
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=85.25 E-value=0.16 Score=40.56 Aligned_cols=29 Identities=21% Similarity=0.571 Sum_probs=21.2
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
-|.||.|++.- +-+ ...|.+.|..|+..+
T Consensus 36 ky~CpfCgk~~----vkR---~a~GIW~C~~C~~~~ 64 (92)
T 3izc_m 36 RYDCSFCGKKT----VKR---GAAGIWTCSCCKKTV 64 (92)
T ss_dssp CCCCSSSCSSC----CEE---EETTEEECTTTCCEE
T ss_pred CCcCCCCCCce----eee---cccceEEcCCCCCEE
Confidence 59999999763 111 134789999999776
No 125
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=84.58 E-value=1.4 Score=38.61 Aligned_cols=61 Identities=21% Similarity=0.328 Sum_probs=43.3
Q ss_pred eecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccchhhhhhcCCCCChhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 020131 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQI 97 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~~~~~~e~~~g~~na~r~~~e~~k~~l~r~n~QlkpI~~~L 97 (330)
..||.||..|.. .+.|....-.|..||.+|....+.. .+.++.++..|..+..||++..
T Consensus 144 ~~~~~~g~~y~~-----~~~pp~~~~~~~~~~~~l~~r~d~~----------------~~~~~~r~~~y~~~~~~~~~~y 202 (233)
T 1ak2_A 144 LIHPQSGRSYHE-----EFNPPKEPMKDDITGEPLIRRSDDN----------------KKALKIRLEAYHTQTTPLVEYY 202 (233)
T ss_dssp EECTTTCCEEBT-----TTBCCSSTTBCTTTCCBCEECCCCC----------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCccCCcccc-----ccCCCccccccccccccccCCCCCC----------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999985 3556555567999999886543311 1234566788888899998887
Q ss_pred Hh
Q 020131 98 NR 99 (330)
Q Consensus 98 k~ 99 (330)
..
T Consensus 203 ~~ 204 (233)
T 1ak2_A 203 SK 204 (233)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 126
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=84.28 E-value=0.48 Score=45.30 Aligned_cols=35 Identities=17% Similarity=0.364 Sum_probs=25.6
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
...+||.|+..=+. -.+|+..|...|..||..|.+
T Consensus 20 ~~~~Cp~Cg~~~~~----iv~D~~~G~~vC~~CG~Vl~e 54 (345)
T 3k7a_M 20 IVLTCPECKVYPPK----IVERFSEGDVVCALCGLVLSD 54 (345)
T ss_dssp CCCCCSTTCCSCCC----CCCCSSSCSCCCSSSCCCCCC
T ss_pred CCCcCcCCCCCCCc----eEEECCCCCEecCCCCeEccc
Confidence 35689999985110 134677899999999998863
No 127
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=84.26 E-value=0.54 Score=38.33 Aligned_cols=32 Identities=16% Similarity=0.447 Sum_probs=23.9
Q ss_pred CCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 15 VQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
...|+|-.||..| .+.....=+||.|+.+.+.
T Consensus 65 v~p~~C~~CG~~F--------~~~~~kPsrCP~CkSe~Ie 96 (105)
T 2gmg_A 65 IKPAQCRKCGFVF--------KAEINIPSRCPKCKSEWIE 96 (105)
T ss_dssp ECCCBBTTTCCBC--------CCCSSCCSSCSSSCCCCBC
T ss_pred EECcChhhCcCee--------cccCCCCCCCcCCCCCccC
Confidence 4579999999999 1222235799999998765
No 128
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=84.25 E-value=0.33 Score=34.59 Aligned_cols=37 Identities=14% Similarity=0.541 Sum_probs=26.4
Q ss_pred eeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
.|.|+.|++.|.....+.. .-.....|.|+.|+....
T Consensus 1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 40 (82)
T 2kmk_A 1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFH 40 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEES
T ss_pred CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhC
Confidence 3899999999986655532 111234699999998774
No 129
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=83.40 E-value=0.96 Score=32.09 Aligned_cols=19 Identities=26% Similarity=0.784 Sum_probs=10.2
Q ss_pred CCeeecCC--CCccccHHHHH
Q 020131 15 VQEYICPN--CQRRYNALDAL 33 (330)
Q Consensus 15 ~~~Y~CP~--C~~~YT~lDA~ 33 (330)
...|.|+. |++.|+....+
T Consensus 36 ~~~~~C~~~~C~k~f~~~~~L 56 (79)
T 2dlk_A 36 QKSFSCPEPACGKSFNFKKHL 56 (79)
T ss_dssp CCCEECSCTTTCCEESSHHHH
T ss_pred CCCeECCCCCCcCccCCHHHH
Confidence 34566655 66666544433
No 130
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=83.38 E-value=0.54 Score=38.00 Aligned_cols=14 Identities=14% Similarity=0.669 Sum_probs=11.8
Q ss_pred CeeccCCCcccccc
Q 020131 42 SFHCENCNGELVAE 55 (330)
Q Consensus 42 ~F~C~~Cg~eL~~~ 55 (330)
.+.|+.||..+...
T Consensus 36 ~~~C~~CGE~~~d~ 49 (133)
T 3o9x_A 36 GLYCVHCEESIMNK 49 (133)
T ss_dssp EEEESSSSCEECCH
T ss_pred eeECCCCCCEeecH
Confidence 68999999998653
No 131
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=83.21 E-value=0.4 Score=35.36 Aligned_cols=25 Identities=28% Similarity=0.647 Sum_probs=19.1
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
.-+||+|+ .||. .-.||.||+++.-
T Consensus 6 mr~C~~Cg-vYTL------------k~~CP~CG~~T~~ 30 (60)
T 2apo_B 6 MKKCPKCG-LYTL------------KEICPKCGEKTVI 30 (60)
T ss_dssp CEECTTTC-CEES------------SSBCSSSCSBCBC
T ss_pred ceeCCCCC-CEec------------cccCcCCCCcCCC
Confidence 46899995 4665 4679999998853
No 132
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=82.99 E-value=0.53 Score=33.89 Aligned_cols=33 Identities=18% Similarity=0.512 Sum_probs=22.7
Q ss_pred CCCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 13 NTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 13 ~~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
..+..+.||.||..- ++....+.|.|..||...
T Consensus 14 i~~~~~fCPkCG~~~-------~ma~~~dr~~C~kCgyt~ 46 (55)
T 2k4x_A 14 LVRKHRFCPRCGPGV-------FLAEHADRYSCGRCGYTE 46 (55)
T ss_dssp CCCSSCCCTTTTTTC-------CCEECSSEEECTTTCCCE
T ss_pred EEEccccCcCCCCce-------eEeccCCEEECCCCCCEE
Confidence 345578999999844 112223489999999875
No 133
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=82.99 E-value=0.56 Score=28.40 Aligned_cols=21 Identities=29% Similarity=0.872 Sum_probs=15.7
Q ss_pred CCCeeecCCCCccccHHHHHh
Q 020131 14 TVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
....|.|+.|++.|+....+.
T Consensus 8 ~~k~~~C~~C~k~f~~~~~l~ 28 (37)
T 1p7a_A 8 GIKPFQCPDCDRSFSRSDHLA 28 (37)
T ss_dssp CSSSBCCTTTCCCBSSHHHHH
T ss_pred CCCCccCCCCCcccCcHHHHH
Confidence 345799999999998655443
No 134
>1nui_A DNA primase/helicase; zinc-biding domain, toprim fold, DNA replication, DNA-direct polymerase, primosome, late protein, ATP-binding; HET: DNA; 2.90A {Enterobacteria phage T7} SCOP: e.13.1.2 g.41.3.2
Probab=82.66 E-value=0.24 Score=44.87 Aligned_cols=32 Identities=25% Similarity=0.438 Sum_probs=22.7
Q ss_pred CCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcc
Q 020131 14 TVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~e 51 (330)
......||.||.+ +++.++ .++.+.|.+||.-
T Consensus 11 ~~~~~~CP~Cg~~----d~~~~~--~dg~~~C~~Cg~~ 42 (255)
T 1nui_A 11 FLYHIPCDNCGSS----DGNSLF--SDGHTFCYVCEKW 42 (255)
T ss_dssp EEEEECCSSSCCS----SCEEEE--TTSCEEETTTCCE
T ss_pred eecCCcCCCCCCC----CCceEe--CCCCeecccCCCc
Confidence 3446789999986 234443 2467999999975
No 135
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=82.19 E-value=0.32 Score=45.09 Aligned_cols=36 Identities=33% Similarity=0.724 Sum_probs=22.9
Q ss_pred eecCCCCcc-ccHHHHHhhcCCCCCCeeccCCCccccccch
Q 020131 18 YICPNCQRR-YNALDALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 18 Y~CP~C~~~-YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
..||+||.. -+..++..=+ ..|.|+.|+.+.+--..
T Consensus 35 ~yCPnCG~~~l~~f~nN~PV----aDF~C~~C~EeyELKSk 71 (257)
T 4esj_A 35 SYCPNCGNNPLNHFENNRPV----ADFYCNHCSEEFELKSK 71 (257)
T ss_dssp CCCTTTCCSSCEEC----CC----CEEECTTTCCEEEEEEE
T ss_pred CcCCCCCChhhhhccCCCcc----cccccCCcchhheeccc
Confidence 459999995 4455555432 37999999988765433
No 136
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.96 E-value=0.83 Score=31.85 Aligned_cols=39 Identities=18% Similarity=0.406 Sum_probs=27.4
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc-CCCccccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE-NCNGELVA 54 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~-~Cg~eL~~ 54 (330)
....|.|+.|++.|+ ...+.. . ...-.|.|+ .||.....
T Consensus 7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~ 49 (66)
T 2eod_A 7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVA 49 (66)
T ss_dssp CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEE
T ss_pred CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCccccc
Confidence 345799999999998 444422 2 223469999 99987643
No 137
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=81.79 E-value=0.41 Score=43.91 Aligned_cols=37 Identities=14% Similarity=0.389 Sum_probs=26.0
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCc-cccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNG-ELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~-eL~~ 54 (330)
...|..|+..|...++...+... ..-+|+.||+ .|..
T Consensus 123 ~~~C~~C~~~~~~~~~~~~~~~~-~~p~C~~Cgg~~lrP 160 (253)
T 1ma3_A 123 KLDCLDCHETYDWSEFVEDFNKG-EIPRCRKCGSYYVKP 160 (253)
T ss_dssp EEEETTTCCEEEGGGTHHHHHTT-CCCCCTTTCCSCEEE
T ss_pred eeeeCCCCCcCcHHHHHHHhccC-CCCCCCCCCCccccc
Confidence 46799999999876655433221 1358999999 7754
No 138
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.69 E-value=1.6 Score=27.84 Aligned_cols=34 Identities=15% Similarity=0.240 Sum_probs=23.7
Q ss_pred CCeeecC--CCCccccHHHHHhh---cCCCCCCeeccCC
Q 020131 15 VQEYICP--NCQRRYNALDALRL---VSLEDDSFHCENC 48 (330)
Q Consensus 15 ~~~Y~CP--~C~~~YT~lDA~~L---ld~~~~~F~C~~C 48 (330)
...|.|+ .|++.|+....+.. +-...-.|.|..|
T Consensus 10 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 48 (48)
T 2ent_A 10 EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG 48 (48)
T ss_dssp CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 4579997 89999997666542 1122346999988
No 139
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=81.61 E-value=0.61 Score=30.63 Aligned_cols=19 Identities=32% Similarity=0.891 Sum_probs=13.1
Q ss_pred CCeeecCCCCccccHHHHH
Q 020131 15 VQEYICPNCQRRYNALDAL 33 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~ 33 (330)
..+|+||.|.+.++..+.+
T Consensus 3 ~EGFiCP~C~~~l~s~~~L 21 (34)
T 3mjh_B 3 SEGFICPQCMKSLGSADEL 21 (34)
T ss_dssp SEEEECTTTCCEESSHHHH
T ss_pred CcccCCcHHHHHcCCHHHH
Confidence 4578888888887755444
No 140
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=81.60 E-value=0.55 Score=38.43 Aligned_cols=39 Identities=28% Similarity=0.595 Sum_probs=26.5
Q ss_pred CCeeecCCCCccccHHHHHhh-cC--CCCCCeeccCCCcccc
Q 020131 15 VQEYICPNCQRRYNALDALRL-VS--LEDDSFHCENCNGELV 53 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L-ld--~~~~~F~C~~Cg~eL~ 53 (330)
...|+|+.|++.|+....+.. +. ...-.|.|+.||....
T Consensus 20 ek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~ 61 (133)
T 2lt7_A 20 RVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFP 61 (133)
T ss_dssp EEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEES
T ss_pred CcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecc
Confidence 346999999999986666542 11 1123599999997763
No 141
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=81.46 E-value=0.53 Score=26.20 Aligned_cols=17 Identities=35% Similarity=0.741 Sum_probs=13.5
Q ss_pred eecCCCCccccHHHHHh
Q 020131 18 YICPNCQRRYNALDALR 34 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~ 34 (330)
|.|+.|++.|.....+.
T Consensus 2 ~~C~~C~k~f~~~~~l~ 18 (27)
T 1znf_A 2 YKCGLCERSFVEKSALS 18 (27)
T ss_dssp CBCSSSCCBCSSHHHHH
T ss_pred ccCCCCCCcCCCHHHHH
Confidence 89999999998655543
No 142
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=81.44 E-value=0.6 Score=42.11 Aligned_cols=38 Identities=18% Similarity=0.542 Sum_probs=25.9
Q ss_pred CCeeecCCCCccccHHHHHhhcC--CCCCCeeccCCCccc
Q 020131 15 VQEYICPNCQRRYNALDALRLVS--LEDDSFHCENCNGEL 52 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~Lld--~~~~~F~C~~Cg~eL 52 (330)
+=.+.||.|+..|.|--+....+ ....++.|+.|+..+
T Consensus 20 ~l~l~Cp~C~~~~~F~gv~~~~~~~~~~sg~~C~~C~~~~ 59 (206)
T 3flo_B 20 TLELSCPSCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLF 59 (206)
T ss_dssp CEEEECTTTCCEEEECSSSCCSSEEEETTEEEETTTCCBC
T ss_pred eeEEECCCCCCccCCCCcccCCCcccccccccCCCCCCcC
Confidence 44689999999887654432211 122478999999987
No 143
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=81.39 E-value=1.1 Score=32.43 Aligned_cols=49 Identities=22% Similarity=0.542 Sum_probs=29.2
Q ss_pred HHHHHhhcCCCCeeecC--CCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 5 LKDELECKNTVQEYICP--NCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP--~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
|..-++.-.....|.|+ .|++.|.....+.. .-.....|.|+.|+....
T Consensus 23 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 76 (89)
T 2wbs_A 23 LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFS 76 (89)
T ss_dssp HHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEES
T ss_pred HHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccC
Confidence 34444444455678887 58888876555432 111223588998887653
No 144
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=81.33 E-value=1.3 Score=32.73 Aligned_cols=49 Identities=27% Similarity=0.550 Sum_probs=30.4
Q ss_pred HHHHHhhcCCCCeeecC--CCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 5 LKDELECKNTVQEYICP--NCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP--~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
|..-++.-.....|.|+ .|++.|.....+.. .-.....|.|+.|+....
T Consensus 33 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 86 (100)
T 2ebt_A 33 LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFS 86 (100)
T ss_dssp HHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCS
T ss_pred HHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccC
Confidence 33444444455679997 69999986655532 111224699999998663
No 145
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=80.76 E-value=0.56 Score=26.36 Aligned_cols=17 Identities=24% Similarity=0.686 Sum_probs=13.6
Q ss_pred eeecCCCCccccHHHHH
Q 020131 17 EYICPNCQRRYNALDAL 33 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~ 33 (330)
.|.|+.|++.|.....+
T Consensus 3 ~~~C~~C~k~f~~~~~l 19 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAM 19 (27)
T ss_dssp CEECSSSSCEESSHHHH
T ss_pred CccCCCcChhhCCHHHH
Confidence 59999999999865544
No 146
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=80.60 E-value=0.48 Score=36.22 Aligned_cols=42 Identities=21% Similarity=0.452 Sum_probs=25.7
Q ss_pred hhHHHHHHhhcCCCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 2 RKKLKDELECKNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 2 rk~Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
||++++=+.. -+..|.||.|++.- +.+. ..|.+.|..|+..+
T Consensus 14 RK~vkkie~~--q~~ky~C~fCgk~~----vkR~---a~GIW~C~~C~~~~ 55 (73)
T 1ffk_W 14 RVRVRDVEIK--HKKKYKCPVCGFPK----LKRA---STSIWVCGHCGYKI 55 (73)
T ss_pred HHHHHHHHHh--cccCccCCCCCCce----eEEE---EeEEEECCCCCcEE
Confidence 4444443322 23579999999731 1111 24679999999775
No 147
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=80.59 E-value=0.3 Score=37.29 Aligned_cols=40 Identities=18% Similarity=0.346 Sum_probs=27.2
Q ss_pred CCCeeecCCCCccccHHHHHhh-cCCCCCCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL-VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L-ld~~~~~F~C~~Cg~eL~ 53 (330)
....|.|+.|++.|.....+.. +..-...|.|+.|+....
T Consensus 13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~ 53 (107)
T 1wjp_A 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFF 53 (107)
T ss_dssp CCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBS
T ss_pred CCcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccC
Confidence 4457999999999986555532 110123699999998774
No 148
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=80.40 E-value=1.8 Score=30.90 Aligned_cols=35 Identities=14% Similarity=0.424 Sum_probs=25.7
Q ss_pred CeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCc
Q 020131 16 QEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNG 50 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~ 50 (330)
..|.|+.|++.|+....+.. +-.....|.|..|+.
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~ 83 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP 83 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCC
T ss_pred cceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCC
Confidence 57999999999987666542 222345799999985
No 149
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=80.36 E-value=0.58 Score=26.36 Aligned_cols=18 Identities=22% Similarity=0.726 Sum_probs=14.2
Q ss_pred eeecCCCCccccHHHHHh
Q 020131 17 EYICPNCQRRYNALDALR 34 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~ 34 (330)
.|.|+.|++.|+....+.
T Consensus 3 ~~~C~~C~k~f~~~~~l~ 20 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQME 20 (28)
T ss_dssp SEECSSSCCEESCHHHHH
T ss_pred CccCCCCCcccCCHHHHH
Confidence 599999999998655443
No 150
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=80.22 E-value=0.49 Score=42.19 Aligned_cols=36 Identities=17% Similarity=0.413 Sum_probs=25.8
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~ 55 (330)
...+||.|+..=+.+ ..|+..|..+|..||..|.+.
T Consensus 20 ~~~~CPECGs~~t~I----V~D~erGE~VCsdCGLVLEEr 55 (197)
T 3k1f_M 20 IVLTCPECKVYPPKI----VERFSEGDVVCALCGLVLSDK 55 (197)
T ss_dssp CCCCCTTTCCSSCCE----EEEGGGTEEEETTTCBBCCCC
T ss_pred cCeECcCCCCcCCeE----EEeCCCCEEEEcCCCCCcCCc
Confidence 346899999831110 346677899999999999654
No 151
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=80.18 E-value=0.76 Score=27.24 Aligned_cols=19 Identities=26% Similarity=0.712 Sum_probs=14.3
Q ss_pred CeeecCCCCccccHHHHHh
Q 020131 16 QEYICPNCQRRYNALDALR 34 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~ 34 (330)
..|.|+.|++.|+....+.
T Consensus 6 k~~~C~~C~k~f~~~~~L~ 24 (35)
T 2elx_A 6 SGYVCALCLKKFVSSIRLR 24 (35)
T ss_dssp CSEECSSSCCEESSHHHHH
T ss_pred CCeECCCCcchhCCHHHHH
Confidence 4699999999998655543
No 152
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.99 E-value=0.82 Score=27.36 Aligned_cols=19 Identities=16% Similarity=0.576 Sum_probs=14.3
Q ss_pred CCeeecCCCCccccHHHHH
Q 020131 15 VQEYICPNCQRRYNALDAL 33 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~ 33 (330)
...|.|+.|++.|+....+
T Consensus 7 ~~~~~C~~C~k~f~~~~~l 25 (36)
T 2elr_A 7 GKTHLCDMCGKKFKSKGTL 25 (36)
T ss_dssp CSSCBCTTTCCBCSSHHHH
T ss_pred CCCeecCcCCCCcCchHHH
Confidence 3569999999999865544
No 153
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=79.97 E-value=1.1 Score=37.37 Aligned_cols=39 Identities=21% Similarity=0.675 Sum_probs=20.6
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGEL 52 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL 52 (330)
....|.|+.|++.|+....+.. .-.....|.|+.|+...
T Consensus 130 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f 171 (190)
T 2i13_A 130 GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSF 171 (190)
T ss_dssp CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCcc
Confidence 3345777777777765444321 00112347777777655
No 154
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.88 E-value=1.4 Score=27.69 Aligned_cols=20 Identities=25% Similarity=0.562 Sum_probs=16.3
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eoj_A 10 ENPYECCECGKVFSRKDQLV 29 (44)
T ss_dssp CCSCEETTTTEECSSHHHHH
T ss_pred CcCeeCCCCCCccCCHHHHH
Confidence 45799999999999766664
No 155
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.68 E-value=1.8 Score=27.58 Aligned_cols=33 Identities=12% Similarity=0.348 Sum_probs=21.9
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytp_A 9 GERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44 (46)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred CCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 3457999999999997666643 11122357776
No 156
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.66 E-value=0.86 Score=27.43 Aligned_cols=19 Identities=16% Similarity=0.518 Sum_probs=14.3
Q ss_pred CCeeecCCCCccccHHHHH
Q 020131 15 VQEYICPNCQRRYNALDAL 33 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~ 33 (330)
...|.|+.|++.|.....+
T Consensus 7 ~k~~~C~~C~k~f~~~~~l 25 (36)
T 2els_A 7 GKIFTCEYCNKVFKFKHSL 25 (36)
T ss_dssp CCCEECTTTCCEESSHHHH
T ss_pred CCCEECCCCCceeCCHHHH
Confidence 4579999999998865544
No 157
>4bbr_M Transcription initiation factor IIB; RNA polymerase, TFIIB; 3.40A {Saccharomyces cerevisiae} PDB: 3k7a_M 4bbs_M
Probab=79.62 E-value=0.36 Score=46.35 Aligned_cols=35 Identities=17% Similarity=0.443 Sum_probs=23.9
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~ 55 (330)
.++||.|+.-=+.+ .+|+..|...|..||..|.+.
T Consensus 21 ~~~Cp~C~~~~~~l----v~D~~~G~~vC~~CGlVl~e~ 55 (345)
T 4bbr_M 21 VLTCPECKVYPPKI----VERFSEGDVVCALCGLVLSDK 55 (345)
T ss_dssp -CCCSSCCCSSCCE----EEEGGGTEEEETTTCBEEESC
T ss_pred CCcCCCCCCCCCce----eEECCCCcEEeCCCCCCccCc
Confidence 56899999611110 345667899999999888643
No 158
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.57 E-value=0.83 Score=35.01 Aligned_cols=37 Identities=14% Similarity=0.314 Sum_probs=18.8
Q ss_pred CeeecCCCCccccHHHHHhhcCC-----CCCCeeccCCCccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSL-----EDDSFHCENCNGEL 52 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~-----~~~~F~C~~Cg~eL 52 (330)
..|.|+.|++.|++.....|... ..-.|.|+.|+...
T Consensus 49 ~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f 90 (115)
T 2dmi_A 49 NHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSF 90 (115)
T ss_dssp CCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBC
T ss_pred CCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCcc
Confidence 34557777777732222222111 12357777777655
No 159
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=79.57 E-value=0.72 Score=25.93 Aligned_cols=17 Identities=24% Similarity=0.809 Sum_probs=13.3
Q ss_pred eeecCCCCccccHHHHH
Q 020131 17 EYICPNCQRRYNALDAL 33 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~ 33 (330)
.|.|+.|++.|+....+
T Consensus 2 ~~~C~~C~~~f~~~~~l 18 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHL 18 (29)
T ss_dssp CCBCTTTCCBCSSHHHH
T ss_pred CeECCCCCcccCCHHHH
Confidence 48999999999865544
No 160
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=79.37 E-value=0.56 Score=26.61 Aligned_cols=17 Identities=29% Similarity=0.778 Sum_probs=13.7
Q ss_pred eeecCCCCccccHHHHH
Q 020131 17 EYICPNCQRRYNALDAL 33 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~ 33 (330)
.|.|+.|++.|+....+
T Consensus 3 ~~~C~~C~k~f~~~~~l 19 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASM 19 (27)
T ss_dssp TEEETTTTEEESCHHHH
T ss_pred CcCCCCCCcccCCHHHH
Confidence 59999999999865544
No 161
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=79.18 E-value=0.75 Score=25.89 Aligned_cols=17 Identities=24% Similarity=0.632 Sum_probs=13.3
Q ss_pred eeecCCCCccccHHHHH
Q 020131 17 EYICPNCQRRYNALDAL 33 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~ 33 (330)
.|.|+.|++.|+....+
T Consensus 3 ~~~C~~C~~~f~~~~~l 19 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSK 19 (30)
T ss_dssp CEECTTTCCEESCHHHH
T ss_pred CccCCCCCcccCCHHHH
Confidence 58999999999865544
No 162
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=79.12 E-value=1.8 Score=26.84 Aligned_cols=21 Identities=29% Similarity=0.635 Sum_probs=16.5
Q ss_pred CCCeeecCCCCccccHHHHHh
Q 020131 14 TVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
....|.|+.|++.|+....+.
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~ 27 (42)
T 2el5_A 7 GENPYECSECGKAFNRKDQLI 27 (42)
T ss_dssp SCCSEECSSSCCEESSHHHHH
T ss_pred CCCCccCCCcChhhCCHHHHH
Confidence 345799999999999766654
No 163
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=78.93 E-value=0.69 Score=25.83 Aligned_cols=13 Identities=38% Similarity=1.180 Sum_probs=9.2
Q ss_pred eeecCCCCccccH
Q 020131 17 EYICPNCQRRYNA 29 (330)
Q Consensus 17 ~Y~CP~C~~~YT~ 29 (330)
.|.|+.|++.|+.
T Consensus 2 ~~~C~~C~~~f~~ 14 (29)
T 2m0e_A 2 EHKCPHCDKKFNQ 14 (29)
T ss_dssp CCCCSSCCCCCCT
T ss_pred CCcCCCCCcccCC
Confidence 4777777777764
No 164
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.89 E-value=1.9 Score=27.28 Aligned_cols=33 Identities=15% Similarity=0.339 Sum_probs=21.7
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~ 44 (46)
T 2yts_A 9 GEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred CCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence 3457999999999997666643 11122357775
No 165
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=78.84 E-value=0.92 Score=27.01 Aligned_cols=20 Identities=10% Similarity=0.431 Sum_probs=14.9
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 5 ~k~~~C~~C~k~f~~~~~l~ 24 (35)
T 1srk_A 5 KRPFVCRICLSAFTTKANCA 24 (35)
T ss_dssp CSCEECSSSCCEESSHHHHH
T ss_pred CcCeeCCCCCcccCCHHHHH
Confidence 34699999999998655543
No 166
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.83 E-value=2.1 Score=27.26 Aligned_cols=33 Identities=15% Similarity=0.303 Sum_probs=21.3
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2enh_A 9 GEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44 (46)
T ss_dssp CSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred CCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 3457999999999997665542 11122357775
No 167
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.76 E-value=1.6 Score=27.29 Aligned_cols=21 Identities=29% Similarity=0.648 Sum_probs=16.4
Q ss_pred CCCeeecCCCCccccHHHHHh
Q 020131 14 TVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
....|.|+.|++.|+....+.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eof_A 9 GEKPYECNECQKAFNTKSNLM 29 (44)
T ss_dssp CCCSEECTTTCCEESCHHHHH
T ss_pred CCCCeECCCCCcccCCHhHHH
Confidence 345799999999999766654
No 168
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.72 E-value=0.87 Score=27.23 Aligned_cols=19 Identities=26% Similarity=0.541 Sum_probs=14.0
Q ss_pred CCeeecCCCCccccHHHHH
Q 020131 15 VQEYICPNCQRRYNALDAL 33 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~ 33 (330)
...|.|+.|++.|+....+
T Consensus 7 ~k~~~C~~C~k~f~~~~~l 25 (36)
T 2elt_A 7 GKPYKCPQCSYASAIKANL 25 (36)
T ss_dssp CCSEECSSSSCEESSHHHH
T ss_pred CCCCCCCCCCcccCCHHHH
Confidence 3468999999998865444
No 169
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.68 E-value=1.7 Score=27.66 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=21.8
Q ss_pred CCCeeecCCCCccccHHHHHhh-c-CC-CCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL-V-SL-EDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L-l-d~-~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. + .. ..-.|.|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yti_A 9 GEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44 (46)
T ss_dssp CCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred CCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence 3457999999999997766643 1 11 12347775
No 170
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.45 E-value=0.79 Score=27.70 Aligned_cols=20 Identities=20% Similarity=0.717 Sum_probs=15.1
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~ 26 (37)
T 2elo_A 7 GRSYSCPVCEKSFSEDRLIK 26 (37)
T ss_dssp CCCCEETTTTEECSSHHHHH
T ss_pred CCCcCCCCCCCccCCHHHHH
Confidence 35699999999998765543
No 171
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.37 E-value=1.9 Score=27.37 Aligned_cols=33 Identities=15% Similarity=0.304 Sum_probs=21.7
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eq2_A 9 GGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44 (46)
T ss_dssp SSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 3457999999999997666543 11122357775
No 172
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=78.36 E-value=0.61 Score=35.47 Aligned_cols=37 Identities=19% Similarity=0.456 Sum_probs=26.3
Q ss_pred eeecCCCCccccHHHHHhh--cCCCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRL--VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~L--ld~~~~~F~C~~Cg~eL~ 53 (330)
.|.|+.|++.|.....+.. .-.....|.|+.|+....
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~ 80 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFK 80 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECS
T ss_pred CccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhC
Confidence 6999999999986655532 111223599999997763
No 173
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.21 E-value=0.89 Score=27.36 Aligned_cols=20 Identities=15% Similarity=0.413 Sum_probs=14.8
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|.....+.
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~ 26 (36)
T 2elq_A 7 GKPFKCSLCEYATRSKSNLK 26 (36)
T ss_dssp CCSEECSSSSCEESCHHHHH
T ss_pred CCCccCCCCCchhCCHHHHH
Confidence 45699999999998655543
No 174
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=78.12 E-value=0.68 Score=26.11 Aligned_cols=17 Identities=35% Similarity=1.025 Sum_probs=12.9
Q ss_pred eeecCCCCccccHHHHH
Q 020131 17 EYICPNCQRRYNALDAL 33 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~ 33 (330)
.|.|+.|++.|+....+
T Consensus 2 ~~~C~~C~k~f~~~~~l 18 (29)
T 1rik_A 2 KFACPECPKRFMRSDHL 18 (29)
T ss_dssp CEECSSSSCEESCSHHH
T ss_pred CccCCCCCchhCCHHHH
Confidence 48999999998754444
No 175
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.11 E-value=2.2 Score=27.05 Aligned_cols=33 Identities=12% Similarity=0.218 Sum_probs=21.7
Q ss_pred CCCeeecCCCCccccHHHHHhh-c-CC-CCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL-V-SL-EDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L-l-d~-~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. + .. ..-.|.|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yrj_A 9 GEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44 (46)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence 3457999999999997666642 1 11 22357775
No 176
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=79.57 E-value=0.44 Score=26.58 Aligned_cols=17 Identities=29% Similarity=0.872 Sum_probs=13.3
Q ss_pred eeecCCCCccccHHHHH
Q 020131 17 EYICPNCQRRYNALDAL 33 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~ 33 (330)
.|.|+.|++.|+....+
T Consensus 2 p~~C~~C~k~f~~~~~l 18 (26)
T 2lvu_A 2 PYVCERCGKRFVQSSQL 18 (26)
Confidence 48999999999865443
No 177
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.92 E-value=0.99 Score=27.13 Aligned_cols=20 Identities=20% Similarity=0.343 Sum_probs=15.3
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~ 26 (36)
T 2elv_A 7 GLLYDCHICERKFKNELDRD 26 (36)
T ss_dssp CCCEECSSSCCEESSHHHHH
T ss_pred CCCeECCCCCCccCCHHHHH
Confidence 45799999999998765543
No 178
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=77.82 E-value=1.5 Score=35.86 Aligned_cols=40 Identities=13% Similarity=0.430 Sum_probs=27.5
Q ss_pred CCCeeecCCCCccccHHHHHhhc--CC-CCCCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRLV--SL-EDDSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~Ll--d~-~~~~F~C~~Cg~eL~ 53 (330)
....|.|+.|++.|+....+..- .. ..-.|.|+.||....
T Consensus 47 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~ 89 (133)
T 2lt7_A 47 WEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFI 89 (133)
T ss_dssp CCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEES
T ss_pred CCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcC
Confidence 34579999999999876665421 11 123599999998764
No 179
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=77.78 E-value=0.79 Score=25.64 Aligned_cols=17 Identities=18% Similarity=0.618 Sum_probs=12.9
Q ss_pred eeecCCCCccccHHHHH
Q 020131 17 EYICPNCQRRYNALDAL 33 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~ 33 (330)
.|.|+.|++.|+....+
T Consensus 2 ~~~C~~C~k~f~~~~~l 18 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNL 18 (29)
T ss_dssp CEECTTTSCEESCHHHH
T ss_pred CccCCCCCCccCChhHH
Confidence 58999999999754443
No 180
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=77.53 E-value=1.2 Score=37.35 Aligned_cols=38 Identities=24% Similarity=0.765 Sum_probs=21.6
Q ss_pred CCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCccc
Q 020131 15 VQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGEL 52 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL 52 (330)
...|.|+.|++.|.....+.. .-.....|.|+.|+...
T Consensus 103 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 143 (190)
T 2i13_A 103 EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSF 143 (190)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCccc
Confidence 345777777777765444432 00112357788887655
No 181
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=77.39 E-value=0.89 Score=35.44 Aligned_cols=27 Identities=19% Similarity=0.599 Sum_probs=21.0
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
..|.|+.|++.|.. .-.||.||.+|..
T Consensus 17 ~~~~C~~C~~~~~~------------~afCPeCgq~Le~ 43 (81)
T 2jrp_A 17 DTAHCETCAKDFSL------------QALCPDCRQPLQV 43 (81)
T ss_dssp SEEECTTTCCEEEE------------EEECSSSCSCCCE
T ss_pred CceECccccccCCC------------cccCcchhhHHHH
Confidence 36779999998765 3489999999853
No 182
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.26 E-value=2.3 Score=26.92 Aligned_cols=33 Identities=15% Similarity=0.352 Sum_probs=21.6
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytf_A 9 GEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred CCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 3457999999999997666643 11112347775
No 183
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=77.24 E-value=3.6 Score=35.59 Aligned_cols=61 Identities=21% Similarity=0.255 Sum_probs=43.8
Q ss_pred eecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccchhhhhhcCCCCChhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 020131 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQI 97 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~~~~~~e~~~g~~na~r~~~e~~k~~l~r~n~QlkpI~~~L 97 (330)
..||.|++.|.. .+.|....-.|..|+.+|....+.. .+.++.++..+..++.||++..
T Consensus 129 ~~~~~~~~~y~~-----~~~pp~~~~~~~~~~~~l~~r~~~~----------------~e~~~~r~~~y~~~~~~l~~~y 187 (227)
T 1zd8_A 129 WIHPASGRVYNI-----EFNPPKTVGIDDLTGEPLIQREDDK----------------PETVIKRLKAYEDQTKPVLEYY 187 (227)
T ss_dssp EEETTTTEEEET-----TTBCCSSTTBCTTTCCBCBCCGGGS----------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccCCcccc-----ccCCCCcccccccccccccCCCCCC----------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 568999988865 3556555568999999997643321 1345667788999999999887
Q ss_pred Hh
Q 020131 98 NR 99 (330)
Q Consensus 98 k~ 99 (330)
..
T Consensus 188 ~~ 189 (227)
T 1zd8_A 188 QK 189 (227)
T ss_dssp HH
T ss_pred Hc
Confidence 64
No 184
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.94 E-value=2.1 Score=27.18 Aligned_cols=32 Identities=16% Similarity=0.286 Sum_probs=21.1
Q ss_pred CCeeecCCCCccccHHHHHhh-c-CC-CCCCeecc
Q 020131 15 VQEYICPNCQRRYNALDALRL-V-SL-EDDSFHCE 46 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L-l-d~-~~~~F~C~ 46 (330)
...|.|+.|++.|.....+.. + .. ..-.|.|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (45)
T 2epu_A 10 QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44 (45)
T ss_dssp CCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred CcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence 457999999999997666542 1 11 22357775
No 185
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.90 E-value=1.5 Score=33.51 Aligned_cols=39 Identities=18% Similarity=0.382 Sum_probs=25.9
Q ss_pred CCCeeecCCCCccccHHHHHhh---c--CC-CCCCeeccCCCccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---V--SL-EDDSFHCENCNGEL 52 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---l--d~-~~~~F~C~~Cg~eL 52 (330)
....|.|+.|++.|.....+.. . -. ....|.|+.|+...
T Consensus 16 ~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f 60 (115)
T 2dmi_A 16 GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW 60 (115)
T ss_dssp CCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCC
T ss_pred CCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCccc
Confidence 3457999999999997665542 1 11 11235599999765
No 186
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.74 E-value=1.3 Score=32.47 Aligned_cols=38 Identities=11% Similarity=0.196 Sum_probs=26.0
Q ss_pred CeeecCCCCccccHHHHHhh---cCCCCC-C--------eeccCCCcccc
Q 020131 16 QEYICPNCQRRYNALDALRL---VSLEDD-S--------FHCENCNGELV 53 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~L---ld~~~~-~--------F~C~~Cg~eL~ 53 (330)
..|.|+.|++.|+....+.. ...... . |.|+.|+....
T Consensus 24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~ 73 (95)
T 2ej4_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFK 73 (95)
T ss_dssp SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCS
T ss_pred CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccC
Confidence 45789999999986655532 112211 2 89999998774
No 187
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.72 E-value=1 Score=27.56 Aligned_cols=19 Identities=21% Similarity=0.457 Sum_probs=14.5
Q ss_pred CCeeecCCCCccccHHHHH
Q 020131 15 VQEYICPNCQRRYNALDAL 33 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~ 33 (330)
...|.|+.|++.|+....+
T Consensus 7 ~k~~~C~~C~k~f~~~~~L 25 (37)
T 2elm_A 7 GHLYYCSQCHYSSITKNCL 25 (37)
T ss_dssp SCEEECSSSSCEEECHHHH
T ss_pred CcCeECCCCCcccCCHHHH
Confidence 4579999999999865444
No 188
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.70 E-value=2.5 Score=26.93 Aligned_cols=33 Identities=12% Similarity=0.206 Sum_probs=21.4
Q ss_pred CCCeeecCCCCccccHHHHHhh--cCC-C-CCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL--VSL-E-DDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L--ld~-~-~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. ... . .-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~ 45 (46)
T 2eoy_A 9 KEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS 45 (46)
T ss_dssp CSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred CCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence 3457999999999997666542 111 1 2357775
No 189
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=76.61 E-value=0.91 Score=25.78 Aligned_cols=17 Identities=35% Similarity=0.794 Sum_probs=12.3
Q ss_pred eeecCCCCccccHHHHH
Q 020131 17 EYICPNCQRRYNALDAL 33 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~ 33 (330)
.|.|+.|++.|+....+
T Consensus 2 ~~~C~~C~k~f~~~~~l 18 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLL 18 (30)
T ss_dssp CSBCTTTCCBCSSSHHH
T ss_pred CcCCcccCcccCChHHH
Confidence 48888888888754443
No 190
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=76.41 E-value=1.3 Score=33.61 Aligned_cols=39 Identities=15% Similarity=0.416 Sum_probs=27.2
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
....|.| .|++.|.....+.. .-.....|.|+.|+....
T Consensus 7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 48 (110)
T 2csh_A 7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFK 48 (110)
T ss_dssp CCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEES
T ss_pred CCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccC
Confidence 3457999 99999986665542 111224699999998774
No 191
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.36 E-value=1 Score=27.23 Aligned_cols=15 Identities=20% Similarity=0.529 Sum_probs=10.9
Q ss_pred CeeecCCCCccccHH
Q 020131 16 QEYICPNCQRRYNAL 30 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~l 30 (330)
..|.|+.|++.|+..
T Consensus 8 k~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 8 RAMKCPYCDFYFMKN 22 (37)
T ss_dssp CCEECSSSSCEECSS
T ss_pred CCeECCCCChhhccC
Confidence 458888888887654
No 192
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=76.30 E-value=1.4 Score=34.05 Aligned_cols=12 Identities=17% Similarity=0.755 Sum_probs=6.0
Q ss_pred eeecCCCCcccc
Q 020131 17 EYICPNCQRRYN 28 (330)
Q Consensus 17 ~Y~CP~C~~~YT 28 (330)
.|.|+.|++.|.
T Consensus 34 ~~~C~~C~~~f~ 45 (124)
T 1ubd_C 34 VHVCAECGKAFV 45 (124)
T ss_dssp CEECTTTCCEES
T ss_pred CeECCCCCchhC
Confidence 355555555554
No 193
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=76.14 E-value=0.81 Score=25.73 Aligned_cols=16 Identities=25% Similarity=0.542 Sum_probs=11.8
Q ss_pred eeecCCCCccccHHHH
Q 020131 17 EYICPNCQRRYNALDA 32 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA 32 (330)
.|.|+.|++.|.....
T Consensus 2 ~~~C~~C~k~f~~~~~ 17 (30)
T 1klr_A 2 TYQCQYCEFRSADSSN 17 (30)
T ss_dssp CCCCSSSSCCCSCSHH
T ss_pred CccCCCCCCccCCHHH
Confidence 4889999998875433
No 194
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=75.72 E-value=2 Score=39.21 Aligned_cols=39 Identities=21% Similarity=0.351 Sum_probs=31.1
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~ 55 (330)
.+..||+|+.+|...=+...+.. .+...||.|+.++...
T Consensus 192 ~g~~C~~C~~~~H~~C~~~~~~~-~~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 192 QGQSCETCGIRMHLPCVAKYFQS-NAEPRCPHCNDYWPHE 230 (238)
T ss_dssp SCEECSSSCCEECHHHHHHHTTT-CSSCBCTTTCCBCCSC
T ss_pred CCcccCccChHHHHHHHHHHHHh-CCCCCCCCCCCCCCCC
Confidence 57899999999998777776643 3468999999998654
No 195
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=75.56 E-value=1.4 Score=40.30 Aligned_cols=40 Identities=25% Similarity=0.406 Sum_probs=32.3
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccch
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
.-.|-.|+...++-....+... +....||+||-.|+....
T Consensus 198 ~~~C~GC~~~lppq~~~~i~~~-~~Iv~Cp~CgRIL~~~~~ 237 (256)
T 3na7_A 198 KQACGGCFIRLNDKIYTEVLTS-GDMITCPYCGRILYAEGA 237 (256)
T ss_dssp TTBCTTTCCBCCHHHHHHHHHS-SSCEECTTTCCEEECSCC
T ss_pred CCccCCCCeeeCHHHHHHHHCC-CCEEECCCCCeeEEeCcc
Confidence 4479999999998888877653 357999999999987643
No 196
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.36 E-value=1.3 Score=27.55 Aligned_cols=20 Identities=20% Similarity=0.622 Sum_probs=16.0
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~ 27 (42)
T 2yte_A 8 EKPYSCAECKETFSDNNRLV 27 (42)
T ss_dssp CCSCBCTTTCCBCSSHHHHH
T ss_pred CCCeECCCCCCccCCHHHHH
Confidence 45699999999999766654
No 197
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=75.15 E-value=1.3 Score=27.54 Aligned_cols=20 Identities=20% Similarity=0.660 Sum_probs=15.8
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 9 ~~~~~C~~C~k~f~~~~~l~ 28 (42)
T 2epc_A 9 ETPYLCGQCGKSFTQRGSLA 28 (42)
T ss_dssp SCCEECSSSCCEESSHHHHH
T ss_pred CCCeECCCCCcccCCHHHHH
Confidence 45699999999998766554
No 198
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=75.07 E-value=0.58 Score=31.61 Aligned_cols=22 Identities=14% Similarity=0.282 Sum_probs=15.7
Q ss_pred CeeecCCCCccccHHHHHhhcC
Q 020131 16 QEYICPNCQRRYNALDALRLVS 37 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld 37 (330)
..|.||+|+..+...+.....|
T Consensus 8 ~~~~C~~C~~~i~~~~~~EH~D 29 (39)
T 2i5o_A 8 DQVPCEKCGSLVPVWDMPEHMD 29 (39)
T ss_dssp CEEECTTTCCEEEGGGHHHHHH
T ss_pred CCcccccccCcCCcccccchhh
Confidence 4688999999888766555433
No 199
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.06 E-value=1.3 Score=27.49 Aligned_cols=21 Identities=19% Similarity=0.586 Sum_probs=16.7
Q ss_pred CCeeecCCCCccccHHHHHhh
Q 020131 15 VQEYICPNCQRRYNALDALRL 35 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L 35 (330)
...|.|+.|++.|+....+..
T Consensus 9 ~k~~~C~~C~k~f~~~~~L~~ 29 (42)
T 2ytb_A 9 EKPYRCDQCGKAFSQKGSLIV 29 (42)
T ss_dssp CCSBCCTTTTCCBSSHHHHHT
T ss_pred CCCeeCCCccchhCCHHHHHH
Confidence 457999999999997766643
No 200
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=74.93 E-value=2.1 Score=32.48 Aligned_cols=17 Identities=29% Similarity=0.870 Sum_probs=9.1
Q ss_pred CeeecCCCCccccHHHH
Q 020131 16 QEYICPNCQRRYNALDA 32 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA 32 (330)
..|.|+.|++.|.....
T Consensus 65 ~~~~C~~C~~~f~~~~~ 81 (119)
T 2jp9_A 65 KPFQCKTCQRKFSRSDH 81 (119)
T ss_dssp CCEECTTTCCEESCHHH
T ss_pred CCccCCccCchhCCHHH
Confidence 34666666666654333
No 201
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=74.65 E-value=1 Score=26.95 Aligned_cols=18 Identities=33% Similarity=0.964 Sum_probs=14.1
Q ss_pred eeecCCCCccccHHHHHh
Q 020131 17 EYICPNCQRRYNALDALR 34 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~ 34 (330)
.|.|+.|++.|+....+.
T Consensus 2 p~~C~~C~k~F~~~~~L~ 19 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLS 19 (33)
T ss_dssp CCCCSSSCCCCSSHHHHH
T ss_pred cccCCCCCchhCCHHHHH
Confidence 489999999998655543
No 202
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=74.48 E-value=0.98 Score=42.50 Aligned_cols=38 Identities=26% Similarity=0.469 Sum_probs=25.3
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~ 55 (330)
...|..|++.|...+....+.. ...-+|+.||+.|..+
T Consensus 139 ~~~C~~C~~~~~~~~~~~~i~~-~~~P~C~~Cgg~lrP~ 176 (285)
T 3glr_A 139 SATCTVCQRPFPGEDIRADVMA-DRVPRCPVCTGVVKPD 176 (285)
T ss_dssp EEEETTTCCEEEGGGGHHHHHT-TCCCBCTTTCCBEEEE
T ss_pred eEEECCCCCcCCHHHHHHHhhc-CCCCCCCCCCCccCCc
Confidence 4589999999986543322111 1246899999998654
No 203
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.28 E-value=1.4 Score=28.15 Aligned_cols=33 Identities=12% Similarity=0.187 Sum_probs=21.9
Q ss_pred CCCeeecCCCCccccHHHHHhh-c-CC-CCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL-V-SL-EDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L-l-d~-~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. + .. ..-.|.|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2enf_A 9 GEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44 (46)
T ss_dssp CCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred CCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence 3457999999999997766643 1 11 12347776
No 204
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=76.35 E-value=0.64 Score=26.40 Aligned_cols=17 Identities=18% Similarity=0.530 Sum_probs=13.4
Q ss_pred eeecCCCCccccHHHHH
Q 020131 17 EYICPNCQRRYNALDAL 33 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~ 33 (330)
.|.|+.|++.|+....+
T Consensus 2 ~~~C~~C~k~f~~~~~l 18 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSL 18 (29)
Confidence 48999999999875444
No 205
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=74.12 E-value=5.7 Score=30.37 Aligned_cols=37 Identities=19% Similarity=0.577 Sum_probs=19.9
Q ss_pred CeeecC--CCCccccHHHHHhh-c-CCCCCCeeccCCCccc
Q 020131 16 QEYICP--NCQRRYNALDALRL-V-SLEDDSFHCENCNGEL 52 (330)
Q Consensus 16 ~~Y~CP--~C~~~YT~lDA~~L-l-d~~~~~F~C~~Cg~eL 52 (330)
..|.|| .|++.|.....+.. + ......|.|+.|+...
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f 44 (124)
T 1ubd_C 4 RTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAF 44 (124)
T ss_dssp -CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEE
T ss_pred CcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchh
Confidence 357777 67777765444421 1 1122357777777544
No 206
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=73.91 E-value=0.97 Score=32.18 Aligned_cols=47 Identities=19% Similarity=0.439 Sum_probs=28.2
Q ss_pred HHHHhhcCCCCeeecCC--CCccccHHHHHhh-cCCCCCCeeccC---CCcccc
Q 020131 6 KDELECKNTVQEYICPN--CQRRYNALDALRL-VSLEDDSFHCEN---CNGELV 53 (330)
Q Consensus 6 e~~l~~~~~~~~Y~CP~--C~~~YT~lDA~~L-ld~~~~~F~C~~---Cg~eL~ 53 (330)
..-++.-.....|.|+. |++.|+....+.. +..-.+ |.|+. |+....
T Consensus 20 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~C~~~~~C~~~f~ 72 (85)
T 2j7j_A 20 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDDSCSFVGK 72 (85)
T ss_dssp HHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-EECCSCSSCCCEES
T ss_pred HHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CCCCCCCCCCCccC
Confidence 33333333445799987 9999986555432 111122 99998 887663
No 207
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.66 E-value=1.5 Score=27.30 Aligned_cols=21 Identities=29% Similarity=0.665 Sum_probs=16.2
Q ss_pred CCCeeecCCCCccccHHHHHh
Q 020131 14 TVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
....|.|+.|++.|+....+.
T Consensus 8 ~~k~~~C~~C~k~f~~~~~L~ 28 (42)
T 2en2_A 8 GEKPYKCETCGARFVQVAHLR 28 (42)
T ss_dssp SSCSEECTTTCCEESSHHHHH
T ss_pred CCCCEeCCCcChhhCCHHHHH
Confidence 345799999999998766554
No 208
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=75.46 E-value=0.71 Score=26.17 Aligned_cols=17 Identities=41% Similarity=0.972 Sum_probs=13.6
Q ss_pred eeecCCCCccccHHHHH
Q 020131 17 EYICPNCQRRYNALDAL 33 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~ 33 (330)
.|.|+.|++.|+....+
T Consensus 3 ~~~C~~C~k~f~~~~~l 19 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGAL 19 (30)
Confidence 59999999999875444
No 209
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.11 E-value=1.5 Score=27.93 Aligned_cols=33 Identities=12% Similarity=0.340 Sum_probs=21.5
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 9 ~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emi_A 9 GERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44 (46)
T ss_dssp SCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred CCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence 3457999999999997666642 11122357775
No 210
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=73.10 E-value=1.6 Score=26.79 Aligned_cols=19 Identities=32% Similarity=0.831 Sum_probs=14.8
Q ss_pred CeeecCCCCccccHHHHHh
Q 020131 16 QEYICPNCQRRYNALDALR 34 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~ 34 (330)
..|.|+.|++.|+....+.
T Consensus 5 k~~~C~~C~k~f~~~~~L~ 23 (39)
T 1njq_A 5 RSYTCSFCKREFRSAQALG 23 (39)
T ss_dssp SSEECTTTCCEESSHHHHH
T ss_pred CceECCCCCcccCCHHHHH
Confidence 4699999999998655553
No 211
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.07 E-value=1.6 Score=27.24 Aligned_cols=20 Identities=30% Similarity=0.738 Sum_probs=16.4
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 9 ~k~~~C~~C~k~f~~~~~L~ 28 (42)
T 2eos_A 9 EKPYPCEICGTRFRHLQTLK 28 (42)
T ss_dssp SCCBCCSSSCCCBSSHHHHH
T ss_pred CCCEECCCCCCccCCHHHHH
Confidence 45799999999999776664
No 212
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=72.96 E-value=2 Score=32.68 Aligned_cols=41 Identities=24% Similarity=0.657 Sum_probs=27.2
Q ss_pred CCCCeeecC--CCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 13 NTVQEYICP--NCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 13 ~~~~~Y~CP--~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
.....|.|+ .|++.|+....+.. .-.....|.|+.|+....
T Consensus 32 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 77 (119)
T 2jp9_A 32 TGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFS 77 (119)
T ss_dssp HTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred CCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhC
Confidence 344579998 79999986555532 111234699999998764
No 213
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=72.69 E-value=0.37 Score=34.42 Aligned_cols=38 Identities=13% Similarity=0.345 Sum_probs=23.9
Q ss_pred eeecCCCCccccHHHHHhhc---CCCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALDALRLV---SLEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Ll---d~~~~~F~C~~Cg~eL~~ 54 (330)
...||.||..=...--+++- .|++--|.|..||..+.+
T Consensus 15 ~~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~w~~ 55 (57)
T 1qyp_A 15 KITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWRS 55 (57)
T ss_dssp ECCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEEEC
T ss_pred EeECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCEecc
Confidence 57899999743322222221 244556899999998754
No 214
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=72.66 E-value=1.2 Score=28.76 Aligned_cols=29 Identities=14% Similarity=0.529 Sum_probs=20.2
Q ss_pred CCeeecCCCCccccHHHHHhhcCCCCCCeeccC
Q 020131 15 VQEYICPNCQRRYNALDALRLVSLEDDSFHCEN 47 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~ 47 (330)
...|.|+.|++.|+..-.+..-- .|.|..
T Consensus 6 ekp~~C~~CgK~F~~~s~L~~H~----py~C~~ 34 (36)
T 1fv5_A 6 PARFMCLPCGIAFSSPSTLEAHQ----AYYCSH 34 (36)
T ss_dssp CCCCEETTTTEECSCHHHHHHHH----HHTSTT
T ss_pred ccCeECCCCCCccCCHhHccCcC----CeECcC
Confidence 45799999999999766554321 466653
No 215
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=72.63 E-value=1.6 Score=32.84 Aligned_cols=28 Identities=14% Similarity=0.310 Sum_probs=20.6
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~e 51 (330)
...||.|+..... +...+.++|+.||..
T Consensus 8 iL~CP~ck~~L~~-------~~~~~~LiC~~cg~~ 35 (69)
T 2pk7_A 8 ILACPICKGPLKL-------SADKTELISKGAGLA 35 (69)
T ss_dssp TCCCTTTCCCCEE-------CTTSSEEEETTTTEE
T ss_pred heeCCCCCCcCeE-------eCCCCEEEcCCCCcE
Confidence 5789999976543 334578999999843
No 216
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.57 E-value=1.6 Score=27.71 Aligned_cols=20 Identities=20% Similarity=0.431 Sum_probs=15.8
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~ 29 (44)
T 2epv_A 10 EKPYECNECGKAFIWKSLLI 29 (44)
T ss_dssp CCSEECSSSCCEESSHHHHH
T ss_pred CcCeECCCCCcccCchHHHH
Confidence 45799999999998766554
No 217
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.51 E-value=1.6 Score=28.01 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=22.3
Q ss_pred CCCeeecCCCCccccHHHHHhh-cC-C-CCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL-VS-L-EDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L-ld-~-~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +- . ..-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eon_A 9 GEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44 (46)
T ss_dssp SCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred CCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence 3457999999999998777643 11 1 12357776
No 218
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.50 E-value=1.6 Score=27.78 Aligned_cols=32 Identities=13% Similarity=0.363 Sum_probs=21.3
Q ss_pred CCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 15 VQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
...|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2emg_A 10 ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44 (46)
T ss_dssp CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred CCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 456999999999997666643 11122357775
No 219
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=72.42 E-value=1.6 Score=28.62 Aligned_cols=21 Identities=29% Similarity=0.646 Sum_probs=16.1
Q ss_pred CCeeecCCCCccccHHHHHhh
Q 020131 15 VQEYICPNCQRRYNALDALRL 35 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L 35 (330)
...|.|+.|++.|+....+..
T Consensus 5 ~kp~~C~~C~k~F~~~~~L~~ 25 (48)
T 3iuf_A 5 DKPYACDICGKRYKNRPGLSY 25 (48)
T ss_dssp TSCEECTTTCCEESSHHHHHH
T ss_pred CcCEECCCcCcccCCHHHHHH
Confidence 356999999999987666543
No 220
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=72.15 E-value=1.2 Score=33.78 Aligned_cols=31 Identities=16% Similarity=0.447 Sum_probs=21.5
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAES 56 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~ 56 (330)
.+.|| |++-+ +++...-.-.|+ ||..+....
T Consensus 4 vv~C~-C~~~~-------~~~~~~kT~~C~-CG~~~~~~k 34 (71)
T 1gh9_A 4 IFRCD-CGRAL-------YSREGAKTRKCV-CGRTVNVKD 34 (71)
T ss_dssp EEEET-TSCCE-------EEETTCSEEEET-TTEEEECCS
T ss_pred EEECC-CCCEE-------EEcCCCcEEECC-CCCeeeece
Confidence 47899 99875 333334468999 999885543
No 221
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=72.09 E-value=1.8 Score=31.28 Aligned_cols=38 Identities=26% Similarity=0.758 Sum_probs=26.5
Q ss_pred CeeecC--CCCccccHHHHHhh---cCCCCCCeeccCCCcccc
Q 020131 16 QEYICP--NCQRRYNALDALRL---VSLEDDSFHCENCNGELV 53 (330)
Q Consensus 16 ~~Y~CP--~C~~~YT~lDA~~L---ld~~~~~F~C~~Cg~eL~ 53 (330)
..|.|+ .|++.|+....+.. .-.....|.|+.|+....
T Consensus 3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 45 (90)
T 1a1h_A 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFS 45 (90)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccC
Confidence 369998 69999986655532 111234699999998764
No 222
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=72.08 E-value=2.9 Score=27.94 Aligned_cols=30 Identities=27% Similarity=0.498 Sum_probs=21.2
Q ss_pred HHHHHhhcCCCCeeecCCCCccccHHHHHh
Q 020131 5 LKDELECKNTVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
|..-++.-.....|.|+.|++.|+....+.
T Consensus 18 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~ 47 (60)
T 2adr_A 18 LKRHYRSHTNEKPYPCGLCNRAFTRRDLLI 47 (60)
T ss_dssp HHHHHHTTTSSCSEECTTTCCEESSHHHHH
T ss_pred HHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence 444444445556799999999999766654
No 223
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=72.05 E-value=0.84 Score=27.10 Aligned_cols=18 Identities=39% Similarity=0.979 Sum_probs=14.2
Q ss_pred eeecCCCCccccHHHHHh
Q 020131 17 EYICPNCQRRYNALDALR 34 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~ 34 (330)
.|.|+.|++.|+....+.
T Consensus 2 p~~C~~C~k~f~~~~~L~ 19 (32)
T 2kfq_A 2 AFACPACPKRFMRSDALS 19 (32)
T ss_dssp CSSSSSSCTTHHHHHTTS
T ss_pred CCCCCCCCcccCCHHHHH
Confidence 489999999998755443
No 224
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=71.70 E-value=1.5 Score=32.79 Aligned_cols=27 Identities=19% Similarity=0.405 Sum_probs=20.2
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNG 50 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~ 50 (330)
...||.|+..... +...+.++|+.||.
T Consensus 8 iL~CP~ck~~L~~-------~~~~~~LiC~~cg~ 34 (68)
T 2hf1_A 8 ILVCPLCKGPLVF-------DKSKDELICKGDRL 34 (68)
T ss_dssp ECBCTTTCCBCEE-------ETTTTEEEETTTTE
T ss_pred heECCCCCCcCeE-------eCCCCEEEcCCCCc
Confidence 5789999986543 23357899999994
No 225
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.54 E-value=1.7 Score=27.32 Aligned_cols=21 Identities=33% Similarity=0.642 Sum_probs=16.4
Q ss_pred CCCeeecCCCCccccHHHHHh
Q 020131 14 TVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
....|.|+.|++.|+....+.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2emb_A 9 TRKRYECSKCQATFNLRKHLI 29 (44)
T ss_dssp CCSSEECTTTCCEESCHHHHH
T ss_pred CCCCeECCCCCCccCCHHHHH
Confidence 345799999999999766554
No 226
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.46 E-value=1.8 Score=27.68 Aligned_cols=33 Identities=12% Similarity=0.256 Sum_probs=21.2
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2em4_A 9 GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44 (46)
T ss_dssp CSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred CCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence 3457999999999997665542 11112347776
No 227
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=71.41 E-value=3 Score=29.25 Aligned_cols=30 Identities=17% Similarity=0.393 Sum_probs=21.3
Q ss_pred HHHHHhhcCCCCeeecCCCCccccHHHHHh
Q 020131 5 LKDELECKNTVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
|..-++.-.....|.|+.|++.|.....+.
T Consensus 30 L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~ 59 (72)
T 1x6e_A 30 LVQHQRVHTGEKPYKCLECGKAFSQNSGLI 59 (72)
T ss_dssp HHHHHHGGGCSCCEECSSSCCEESSHHHHH
T ss_pred HHHHHHhcCCCCCeECCCCCcccCCHHHHH
Confidence 444444445566899999999998766554
No 228
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.30 E-value=1.7 Score=27.70 Aligned_cols=20 Identities=20% Similarity=0.667 Sum_probs=16.1
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yto_A 10 EKPYKCSDCGKAFTRKSGLH 29 (46)
T ss_dssp CCCEECSSSCCEESSHHHHH
T ss_pred CCCEECcccCCccCCHhHHH
Confidence 45799999999999766654
No 229
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.30 E-value=1.7 Score=27.16 Aligned_cols=20 Identities=20% Similarity=0.698 Sum_probs=16.3
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2en7_A 10 MKPYVCNECGKAFRSKSYLI 29 (44)
T ss_dssp SSSSCCTTTCCCCSSHHHHH
T ss_pred CcCeECCCCCCccCCHHHHH
Confidence 45699999999999776664
No 230
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.21 E-value=1.8 Score=27.41 Aligned_cols=33 Identities=15% Similarity=0.351 Sum_probs=21.4
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eow_A 9 GEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44 (46)
T ss_dssp CCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred CCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence 3457999999999997666542 11112347776
No 231
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=70.99 E-value=1.3 Score=38.77 Aligned_cols=28 Identities=29% Similarity=0.513 Sum_probs=21.9
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~e 51 (330)
-+.-||.|+++-+. ..++.|+|+.|+..
T Consensus 41 ~Y~ACp~CnKKV~~--------~~~g~~~CekC~~~ 68 (172)
T 3u50_C 41 YYYRCTCQGKSVLK--------YHGDSFFCESCQQF 68 (172)
T ss_dssp EEEECTTSCCCEEE--------ETTTEEEETTTTEE
T ss_pred EehhchhhCCEeee--------CCCCeEECCCCCCC
Confidence 35579999999762 23478999999987
No 232
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=70.88 E-value=0.99 Score=41.21 Aligned_cols=35 Identities=17% Similarity=0.439 Sum_probs=24.1
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~ 55 (330)
...|..|++.|...+. ++. ...-+|+.||+.|..+
T Consensus 121 ~~~C~~C~~~~~~~~~---~~~-~~~p~C~~Cgg~lrP~ 155 (249)
T 1m2k_A 121 VVRCTSCNNSFEVESA---PKI-PPLPKCDKCGSLLRPG 155 (249)
T ss_dssp EEEESSSSCEEECSSC---CCS-SSCCBCSSSSSBEEEE
T ss_pred eeEeCCCCCcccchhh---ccC-CCCCCCCCCCCCcCCe
Confidence 4679999999875432 221 1146999999998654
No 233
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.78 E-value=1.9 Score=27.33 Aligned_cols=21 Identities=19% Similarity=0.490 Sum_probs=16.4
Q ss_pred CCCeeecCCCCccccHHHHHh
Q 020131 14 TVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
....|.|+.|++.|+....+.
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eor_A 9 GEKPYNCEECGKAFIHDSQLQ 29 (46)
T ss_dssp CCCSEECTTTCCEESSHHHHH
T ss_pred CCcCccCCCCCCCcCCHHHHH
Confidence 345799999999999766654
No 234
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.74 E-value=1.9 Score=27.46 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=21.5
Q ss_pred CCCeeecCCCCccccHHHHHhh-c-CC-CCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL-V-SL-EDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L-l-d~-~~~~F~C~ 46 (330)
....|.|+.|++.|.....+.. + .. ..-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eq1_A 9 GEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44 (46)
T ss_dssp CSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred CCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 3457999999999997666643 1 11 12347775
No 235
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.69 E-value=1.9 Score=27.47 Aligned_cols=33 Identities=9% Similarity=0.342 Sum_probs=21.4
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2en9_A 9 GKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44 (46)
T ss_dssp SSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred CCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 3457999999999997666542 11112357776
No 236
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.68 E-value=1.9 Score=27.52 Aligned_cols=33 Identities=12% Similarity=0.222 Sum_probs=21.8
Q ss_pred CCCeeecCCCCccccHHHHHhh--cCC-CCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL--VSL-EDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L--ld~-~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. ... ..-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2em6_A 9 GEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44 (46)
T ss_dssp CCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 3457999999999997666643 111 12357776
No 237
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=70.65 E-value=1.8 Score=27.63 Aligned_cols=32 Identities=9% Similarity=0.314 Sum_probs=20.9
Q ss_pred CCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 15 VQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
...|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emj_A 10 EKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44 (46)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred CCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 457999999999997666542 11112357775
No 238
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.56 E-value=1.9 Score=26.67 Aligned_cols=20 Identities=20% Similarity=0.609 Sum_probs=16.0
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~ 27 (41)
T 2ept_A 8 QRVYECQECGKSFRQKGSLT 27 (41)
T ss_dssp CCCEECSSSCCEESSHHHHH
T ss_pred CCCeECCCCCCCcCCHHHHH
Confidence 45799999999999766654
No 239
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.53 E-value=1.9 Score=27.47 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=21.6
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yth_A 9 GEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44 (46)
T ss_dssp CSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred CCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence 3457999999999997666543 11122357775
No 240
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=70.05 E-value=1.7 Score=32.55 Aligned_cols=29 Identities=10% Similarity=0.271 Sum_probs=20.9
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~e 51 (330)
....||.|+..... +...+.++|+.||..
T Consensus 7 ~iL~CP~ck~~L~~-------~~~~~~LiC~~cg~~ 35 (68)
T 2jr6_A 7 DILVCPVTKGRLEY-------HQDKQELWSRQAKLA 35 (68)
T ss_dssp CCCBCSSSCCBCEE-------ETTTTEEEETTTTEE
T ss_pred hheECCCCCCcCeE-------eCCCCEEEcCCCCcE
Confidence 35789999976543 234578999999843
No 241
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=69.95 E-value=3.5 Score=28.64 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=21.9
Q ss_pred HHHHHHhhcCCCCeeecCCCCccccHHHHHh
Q 020131 4 KLKDELECKNTVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 4 ~Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
.|..-++.-.....|.|+.|++.|.....+.
T Consensus 24 ~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~ 54 (70)
T 1x5w_A 24 ALRIHERIHCTDRPFKCNYCSFDTKQPSNLS 54 (70)
T ss_dssp HHHHHHGGGCCSCSEECSSSSCEESSHHHHH
T ss_pred HHHHHHHHcCCCCCEeCCCCCCccCCHHHHH
Confidence 3444455545556799999999999766654
No 242
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.71 E-value=1.9 Score=27.47 Aligned_cols=21 Identities=14% Similarity=0.485 Sum_probs=16.5
Q ss_pred CCCeeecCCCCccccHHHHHh
Q 020131 14 TVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
....|.|+.|++.|+....+.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emz_A 9 GERPFKCNECGKGFGRRSHLA 29 (46)
T ss_dssp CCCSCCCSSSCCCCSSHHHHH
T ss_pred CCCCeECCCCCcccCCHHHHH
Confidence 345699999999999776654
No 243
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.70 E-value=1.7 Score=27.64 Aligned_cols=33 Identities=12% Similarity=0.237 Sum_probs=21.8
Q ss_pred CCCeeecCCCCccccHHHHHhh-c-CC-CCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL-V-SL-EDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L-l-d~-~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. + .. ..-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eq3_A 9 GEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44 (46)
T ss_dssp CCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred CCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 3457999999999997776643 1 11 22357775
No 244
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=69.59 E-value=3.4 Score=27.18 Aligned_cols=30 Identities=23% Similarity=0.544 Sum_probs=20.8
Q ss_pred HHHHHhhcCCCCeeecCCCCccccHHHHHh
Q 020131 5 LKDELECKNTVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
|..-++.-.....|.|+.|++.|.....+.
T Consensus 17 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~ 46 (57)
T 1bbo_A 17 LKKHIRTHTDVRPYHCTYCNFSFKTKGNLT 46 (57)
T ss_dssp HHHHHHHTSSCCCEECSSSSCEESSHHHHH
T ss_pred HHHHHHhcCCCCCccCCCCCchhcCHHHHH
Confidence 444444445556799999999998765553
No 245
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.52 E-value=1.7 Score=27.71 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=21.1
Q ss_pred CCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 15 VQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
...|.|+.|++.|.....+.. +-.....|.|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eoz_A 10 EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44 (46)
T ss_dssp CCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred CCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 456999999999997666642 11112357776
No 246
>1vzi_A Desulfoferrodoxin; ferrocyanide, microspectrophotometry, redox states, photoreduction, dinuclear iron cluster, oxidoreductase; 1.15A {Desulfovibrio baarsii} SCOP: b.1.13.1 g.41.5.2 PDB: 1vzh_A* 1vzg_A 2ji1_A 2ji2_A 2ji3_A 1dfx_A
Probab=69.48 E-value=0.69 Score=38.49 Aligned_cols=34 Identities=24% Similarity=0.471 Sum_probs=23.9
Q ss_pred CCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccc
Q 020131 15 VQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAES 56 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~ 56 (330)
.++|+|+.||..... +....+.+.| ||.+|..-.
T Consensus 5 ~~fYkC~~CGnivev------~~~g~~~l~C--CG~~m~~l~ 38 (126)
T 1vzi_A 5 LQVYKCEVCGNIVEV------LNGGIGELVC--CNQDMKLMS 38 (126)
T ss_dssp TCEEECTTTCCEEEE------EECCSSCEEE--TTEECEECC
T ss_pred CcEEEcCCCCeEEEE------EcCCCcceec--CCccccccc
Confidence 569999999998853 2223345677 999886643
No 247
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=69.39 E-value=1.4 Score=41.44 Aligned_cols=37 Identities=16% Similarity=0.371 Sum_probs=24.0
Q ss_pred eeecCCCCccccHHHHHh----hcCCCCCCeeccCCCcccccc
Q 020131 17 EYICPNCQRRYNALDALR----LVSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~----Lld~~~~~F~C~~Cg~eL~~~ 55 (330)
...|..|++.|...+.+. .+. ....-+|+ ||+.|..+
T Consensus 154 ~~~C~~C~~~~~~~~~~~~~~~~~~-~~~~P~C~-Cgg~lrPd 194 (290)
T 3u31_A 154 EAVCCTCNKIVKLNKIMLQKTSHFM-HQLPPECP-CGGIFKPN 194 (290)
T ss_dssp EEEETTTCCEEECCTGGGSTTSSTT-TSSSCBCT-TSCBEEEE
T ss_pred cceeCCCCCcCChhHhhhccccccc-ccCCCCCC-CCCEECCe
Confidence 468999999997544431 111 11246899 99988653
No 248
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.34 E-value=2.1 Score=27.01 Aligned_cols=20 Identities=15% Similarity=0.335 Sum_probs=15.7
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eou_A 10 KTTSECQECGKIFRHSSLLI 29 (44)
T ss_dssp SCCCCCTTTCCCCSSHHHHH
T ss_pred CcCeECCCCCcccCCHHHHH
Confidence 45799999999999765554
No 249
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=69.20 E-value=1.9 Score=32.44 Aligned_cols=29 Identities=17% Similarity=0.427 Sum_probs=21.0
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~e 51 (330)
....||.|+....+ +...+.++|+.||..
T Consensus 7 ~iL~CP~ck~~L~~-------~~~~~~LiC~~cg~~ 35 (70)
T 2js4_A 7 DILVCPVCKGRLEF-------QRAQAELVCNADRLA 35 (70)
T ss_dssp CCCBCTTTCCBEEE-------ETTTTEEEETTTTEE
T ss_pred hheECCCCCCcCEE-------eCCCCEEEcCCCCce
Confidence 35789999996543 233578999999843
No 250
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.14 E-value=2 Score=27.37 Aligned_cols=33 Identities=18% Similarity=0.366 Sum_probs=21.4
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eoh_A 9 GKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44 (46)
T ss_dssp CSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred CCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 3457999999999997665542 11122357775
No 251
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=68.89 E-value=3.7 Score=28.60 Aligned_cols=41 Identities=20% Similarity=0.577 Sum_probs=27.3
Q ss_pred CCCCeeecCC--CCccccHHHHHhh---cCCCCCCeeccC--CCcccc
Q 020131 13 NTVQEYICPN--CQRRYNALDALRL---VSLEDDSFHCEN--CNGELV 53 (330)
Q Consensus 13 ~~~~~Y~CP~--C~~~YT~lDA~~L---ld~~~~~F~C~~--Cg~eL~ 53 (330)
.....|+|+. |++.|.....+.. +-...-.|.|+. |+....
T Consensus 13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~ 60 (72)
T 2epa_A 13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFA 60 (72)
T ss_dssp CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEES
T ss_pred cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccC
Confidence 3456799988 9999985544432 112234699975 998764
No 252
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.82 E-value=1.7 Score=27.38 Aligned_cols=20 Identities=20% Similarity=0.572 Sum_probs=15.7
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2yu5_A 10 ENPFKCSKCDRVFTQRNYLV 29 (44)
T ss_dssp CCSEECSSSSCEESSSHHHH
T ss_pred CCCeECCCCCchhCCHHHHH
Confidence 35699999999999765553
No 253
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.75 E-value=2.1 Score=27.20 Aligned_cols=32 Identities=13% Similarity=0.261 Sum_probs=21.0
Q ss_pred CCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 15 VQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
...|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em3_A 10 EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred CcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 456999999999997666542 11122357775
No 254
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=68.52 E-value=3.1 Score=33.38 Aligned_cols=39 Identities=13% Similarity=0.206 Sum_probs=25.0
Q ss_pred CCeeecCCCCccccHHHHHhh-cC--CCCCC---------eeccCCCcccc
Q 020131 15 VQEYICPNCQRRYNALDALRL-VS--LEDDS---------FHCENCNGELV 53 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L-ld--~~~~~---------F~C~~Cg~eL~ 53 (330)
...|.|+.|++.|.....+.. +. ..... |.|+.|+....
T Consensus 23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~ 73 (155)
T 2rpc_A 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFK 73 (155)
T ss_dssp CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCS
T ss_pred hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccC
Confidence 456889999999986665542 11 11111 78999987763
No 255
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=68.47 E-value=2.9 Score=27.57 Aligned_cols=26 Identities=23% Similarity=0.416 Sum_probs=18.3
Q ss_pred HhhcCCCCeeecCCCCccccHHHHHh
Q 020131 9 LECKNTVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 9 l~~~~~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
++.-.....|.|+.|++.|+....+.
T Consensus 24 ~~~h~~~~~~~C~~C~~~f~~~~~l~ 49 (57)
T 3uk3_C 24 LRTHTGEKPYKCEFCEYAAAQKTSLR 49 (57)
T ss_dssp HHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred HHHcCCCCCcCCCCCcchhCCHHHHH
Confidence 33334455799999999998766553
No 256
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=68.45 E-value=1.7 Score=32.03 Aligned_cols=25 Identities=28% Similarity=0.663 Sum_probs=18.8
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
.-+||.||. ||. .-.||.||.+..-
T Consensus 5 mr~C~~Cg~-YTL------------k~~CP~CG~~t~~ 29 (60)
T 2aus_D 5 IRKCPKCGR-YTL------------KETCPVCGEKTKV 29 (60)
T ss_dssp CEECTTTCC-EES------------SSBCTTTCSBCEE
T ss_pred ceECCCCCC-EEc------------cccCcCCCCccCC
Confidence 468999964 654 4579999998853
No 257
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.36 E-value=2.1 Score=27.17 Aligned_cols=33 Identities=12% Similarity=0.362 Sum_probs=21.4
Q ss_pred CCCeeecCCCCccccHHHHHhh---cCCCCCCeecc
Q 020131 14 TVQEYICPNCQRRYNALDALRL---VSLEDDSFHCE 46 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~L---ld~~~~~F~C~ 46 (330)
....|.|+.|++.|+....+.. +-...-.|.|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ep1_A 9 GEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44 (46)
T ss_dssp SCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred CCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 3456999999999997666542 11112357776
No 258
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.96 E-value=2.2 Score=27.26 Aligned_cols=21 Identities=10% Similarity=0.282 Sum_probs=16.4
Q ss_pred CCCeeecCCCCccccHHHHHh
Q 020131 14 TVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
....|.|+.|++.|+....+.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eom_A 9 GERGHRCSDCGKFFLQASNFI 29 (46)
T ss_dssp CCSSCCCSSSCCCCSSHHHHH
T ss_pred CCCCcCCCCCCCeeCChHHHH
Confidence 345699999999999766654
No 259
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=67.84 E-value=3 Score=29.09 Aligned_cols=26 Identities=19% Similarity=0.502 Sum_probs=18.2
Q ss_pred HhhcCCCCeeecCCCCccccHHHHHh
Q 020131 9 LECKNTVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 9 l~~~~~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
++.-.....|.|+.|++.|+....+.
T Consensus 41 ~~~h~~~~~~~C~~C~~~f~~~~~l~ 66 (73)
T 1f2i_G 41 IRIHTGQKPFQCRICMRNFSRSDHLT 66 (73)
T ss_dssp HHHHHCCCCEECTTTCCEESCHHHHH
T ss_pred HHhhCCCCCeECCCCCchhCCHHHHH
Confidence 33333445799999999998765553
No 260
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=67.81 E-value=3.1 Score=32.75 Aligned_cols=38 Identities=16% Similarity=0.002 Sum_probs=27.8
Q ss_pred CCCeeecCC------------CCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 14 TVQEYICPN------------CQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 14 ~~~~Y~CP~------------C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
-...|.||. ||..|--.=....+. +.+.||.|+.+|..
T Consensus 26 ~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~---~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 26 APDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLL---NSPTDPFNRQTLTE 75 (100)
T ss_dssp CSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTT---SCSBCSSSCCBCCT
T ss_pred CcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHH---cCCCCCCCCCCCCh
Confidence 355789986 677777655556655 36899999999965
No 261
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.44 E-value=1.9 Score=27.42 Aligned_cols=20 Identities=15% Similarity=0.371 Sum_probs=15.3
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2en3_A 10 EKPFQCKECGMNFSWSCSLF 29 (46)
T ss_dssp CCSEECSSSCCEESSSHHHH
T ss_pred CCCeeCcccChhhCCHHHHH
Confidence 45699999999998655543
No 262
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=67.13 E-value=2.4 Score=28.19 Aligned_cols=19 Identities=26% Similarity=0.382 Sum_probs=14.3
Q ss_pred CCeeecCCCCccccHHHHH
Q 020131 15 VQEYICPNCQRRYNALDAL 33 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~ 33 (330)
...|.|+.|++.|+....+
T Consensus 22 ~k~~~C~~C~k~f~~~~~L 40 (54)
T 1yui_A 22 EQPATCPICYAVIRQSRNL 40 (54)
T ss_dssp SCCEECTTTCCEESSHHHH
T ss_pred CCCccCCCCCcccCCHHHH
Confidence 4569999999999865544
No 263
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=66.92 E-value=3.9 Score=31.03 Aligned_cols=32 Identities=16% Similarity=0.308 Sum_probs=23.3
Q ss_pred HHHHHHhhcCCCCeeecCCCCccccHHHHHhh
Q 020131 4 KLKDELECKNTVQEYICPNCQRRYNALDALRL 35 (330)
Q Consensus 4 ~Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~L 35 (330)
.|+.-++.-.....|.|+.|++.|+....+..
T Consensus 43 ~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~ 74 (85)
T 2lv2_A 43 AQERHLRLLHAAQVFPCKYCPATFYSSPGLTR 74 (85)
T ss_dssp HHHHHHHTTSCSSSEECTTSSCEESSHHHHHH
T ss_pred HHhhhhhhccCCCccCCCCCCCEeCCHHHHHH
Confidence 45555555556678999999999997776643
No 264
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=66.78 E-value=4 Score=27.16 Aligned_cols=25 Identities=8% Similarity=0.149 Sum_probs=17.1
Q ss_pred HHHHHh-hcCCCCeeecCCCCccccH
Q 020131 5 LKDELE-CKNTVQEYICPNCQRRYNA 29 (330)
Q Consensus 5 Le~~l~-~~~~~~~Y~CP~C~~~YT~ 29 (330)
|..-++ .-.....|.|+.|++.|+.
T Consensus 28 L~~H~~~~H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 28 LNGHIKQVHTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp HHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred HHHHHHHhcCCCCCccCCCCCCCCCC
Confidence 444443 3344567999999999973
No 265
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.75 E-value=1.8 Score=27.28 Aligned_cols=21 Identities=19% Similarity=0.573 Sum_probs=16.3
Q ss_pred CCCeeecCCCCccccHHHHHh
Q 020131 14 TVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
....|.|+.|++.|+....+.
T Consensus 9 ~~~~~~C~~C~k~F~~~~~L~ 29 (44)
T 2eox_A 9 DSKSYNCNECGKAFTRIFHLT 29 (44)
T ss_dssp CCCCEEETTTTEEESSSHHHH
T ss_pred CCCCeECcccCcccCCHHHHH
Confidence 345799999999998766654
No 266
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.41 E-value=2.6 Score=26.51 Aligned_cols=20 Identities=20% Similarity=0.667 Sum_probs=15.9
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|.....+.
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~ 27 (43)
T 2yrm_A 8 NGAFFCNECDCRFSEEASLK 27 (43)
T ss_dssp SCCBCCSSSCCCBSSHHHHH
T ss_pred CCCEECCCCCCeeCChHHHH
Confidence 45699999999999766654
No 267
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.39 E-value=0.47 Score=34.95 Aligned_cols=42 Identities=14% Similarity=0.371 Sum_probs=29.1
Q ss_pred cCCCCeeecCCCCccccHHHHHhhcCC-CCCCeeccCCCcccc
Q 020131 12 KNTVQEYICPNCQRRYNALDALRLVSL-EDDSFHCENCNGELV 53 (330)
Q Consensus 12 ~~~~~~Y~CP~C~~~YT~lDA~~Lld~-~~~~F~C~~Cg~eL~ 53 (330)
......|.|+.|+..|...+....... ..-.|.|+.|+..+.
T Consensus 12 ~c~~r~~~C~~C~~~~~~~~L~~H~~~c~~~~~~C~~C~~~~~ 54 (75)
T 2d9k_A 12 ECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVL 54 (75)
T ss_dssp CCCCCCEECSSSCCEECHHHHHHHHHHHHHCEEECSSSCCEEE
T ss_pred cCCCcccCCcccChHhhHHHHHHHHhHcCCCceEcccCCCcCc
Confidence 344567999999999986665544311 123599999998754
No 268
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=66.35 E-value=4.7 Score=33.52 Aligned_cols=19 Identities=32% Similarity=0.842 Sum_probs=9.7
Q ss_pred CCeeecCC--CCccccHHHHH
Q 020131 15 VQEYICPN--CQRRYNALDAL 33 (330)
Q Consensus 15 ~~~Y~CP~--C~~~YT~lDA~ 33 (330)
...|.|+. |+++|+....+
T Consensus 132 ~~~~~C~~~~C~k~F~~~~~L 152 (190)
T 1tf6_A 132 QLPYECPHEGCDKRFSLPSRL 152 (190)
T ss_dssp SCSSBCCSSSCCCBCSSHHHH
T ss_pred CCCccCCCCCCCchhcCHHHH
Confidence 34455655 66655544433
No 269
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=66.34 E-value=2.5 Score=31.60 Aligned_cols=28 Identities=14% Similarity=0.103 Sum_probs=20.5
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~e 51 (330)
...||.|+....+ +...+.+.|+.||..
T Consensus 10 iL~CP~ck~~L~~-------~~~~g~LvC~~c~~~ 37 (67)
T 2jny_A 10 VLACPKDKGPLRY-------LESEQLLVNERLNLA 37 (67)
T ss_dssp CCBCTTTCCBCEE-------ETTTTEEEETTTTEE
T ss_pred HhCCCCCCCcCeE-------eCCCCEEEcCCCCcc
Confidence 5789999986543 334578999999843
No 270
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=65.81 E-value=1.9 Score=31.68 Aligned_cols=21 Identities=33% Similarity=0.800 Sum_probs=16.9
Q ss_pred CCeeecCCCCccccHHHHHhh
Q 020131 15 VQEYICPNCQRRYNALDALRL 35 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L 35 (330)
...|.||+|+.+|=.|.-...
T Consensus 24 ~akY~CPrC~~rYCSl~C~k~ 44 (59)
T 1x4s_A 24 PARYTCPRCNAPYCSLRCYRT 44 (59)
T ss_dssp EECEECTTTCCEESSHHHHHH
T ss_pred CccccCcCCCCCccChHHHHH
Confidence 457999999999987766654
No 271
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=65.26 E-value=4.3 Score=28.49 Aligned_cols=30 Identities=20% Similarity=0.424 Sum_probs=20.6
Q ss_pred HHHHHhhcCCCCeeecCCCCccccHHHHHh
Q 020131 5 LKDELECKNTVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
|..-++.-.....|.|+.|++.|.....+.
T Consensus 33 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~ 62 (74)
T 2lce_A 33 LASHKTVHTGEKPYRCNICGAQFNRPANLK 62 (74)
T ss_dssp HHHHHHHHCCCCSEECTTTCCEESCHHHHH
T ss_pred HHHHHHHcCCCCCEECCCCCchhCCHHHHH
Confidence 444444444556799999999998765553
No 272
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=65.20 E-value=3.1 Score=39.59 Aligned_cols=39 Identities=15% Similarity=0.335 Sum_probs=26.4
Q ss_pred eeecCC--CCccccHHHHHhhcCCCCCCeeccCCCccccccc
Q 020131 17 EYICPN--CQRRYNALDALRLVSLEDDSFHCENCNGELVAES 56 (330)
Q Consensus 17 ~Y~CP~--C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~ 56 (330)
...|.. |++.|........+.. ...-+|+.||+.|..+.
T Consensus 159 ~~~C~~~~C~~~~~~~~~~~~i~~-~~~P~C~~Cgg~lrP~V 199 (323)
T 1j8f_A 159 TSHCVSASCRHEYPLSWMKEKIFS-EVTPKCEDCQSLVKPDI 199 (323)
T ss_dssp EEEESCTTTCCEECHHHHHHHHHT-TCCCBCTTTCCBEEEEE
T ss_pred eeecCCCccCccccHHHHHHhhcc-CCCCCCcCCCCccCCCE
Confidence 467999 9999986554432221 12469999999986543
No 273
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=64.76 E-value=1.5 Score=48.13 Aligned_cols=39 Identities=21% Similarity=0.586 Sum_probs=22.8
Q ss_pred CeeecCCCCccccHHH---HHhhcCCCCCCeeccCCCccccccch
Q 020131 16 QEYICPNCQRRYNALD---ALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lD---A~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
..|+||+|+.. .|.+ +..=+|.. .=.||.||++|.-+.-
T Consensus 501 phy~c~~c~~~-ef~~~~~~~~g~dlp--~k~cp~cg~~~~~dg~ 542 (1041)
T 3f2b_A 501 PHYVCPNCKHS-EFFNDGSVGSGFDLP--DKNCPRCGTKYKKDGH 542 (1041)
T ss_dssp SEEECTTTCCE-EECCSSCCSCGGGSC--CCBCTTTCCBCEEECC
T ss_pred ccccCcccccc-ccccccccccccCCc--cccCccccccccccCC
Confidence 36999999862 1111 11112222 3589999998765443
No 274
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=64.26 E-value=4.8 Score=28.45 Aligned_cols=30 Identities=17% Similarity=0.368 Sum_probs=21.6
Q ss_pred HHHHHhhcCCCCeeecCCCCccccHHHHHh
Q 020131 5 LKDELECKNTVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
|..-++.-.....|.|+.|++.|.....+.
T Consensus 34 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~ 63 (77)
T 2cot_A 34 LSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63 (77)
T ss_dssp HHHHHTTTCCSCSEECSSSCCEESSHHHHH
T ss_pred HHHHHHHcCCCcCeeCCCCCCccCCHHHHH
Confidence 444444445556799999999999776664
No 275
>1ovx_A ATP-dependent CLP protease ATP-binding subunit CL; treble CLEF zinc finger, homodimer, metal binding protein; NMR {Escherichia coli} SCOP: g.39.1.11
Probab=63.68 E-value=0.71 Score=34.78 Aligned_cols=30 Identities=17% Similarity=0.610 Sum_probs=22.1
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCC
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENC 48 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~C 48 (330)
..+.|..||+.-+ ++..|+.-. +.|+|..|
T Consensus 17 ~~~~CSFCGK~e~--eV~~LIaGp-gvyICdeC 46 (67)
T 1ovx_A 17 KLLYCSFCGKSQH--EVRKLIAGP-SVYICDEC 46 (67)
T ss_dssp -CCCCTTTCCCTT--TSSSEEECS-SCEEEHHH
T ss_pred CCcEecCCCCCHH--HHcccCCCC-CCChhHHH
Confidence 3478999999554 677777542 57999988
No 276
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=63.59 E-value=2.2 Score=34.45 Aligned_cols=12 Identities=25% Similarity=0.634 Sum_probs=8.0
Q ss_pred CeeccCCCcccc
Q 020131 42 SFHCENCNGELV 53 (330)
Q Consensus 42 ~F~C~~Cg~eL~ 53 (330)
.-.||.|+.+|+
T Consensus 61 ~a~CPdC~q~Le 72 (101)
T 2jne_A 61 KALCPDCHQPLQ 72 (101)
T ss_dssp EEECTTTCSBCE
T ss_pred cccCcchhhHHH
Confidence 346777777774
No 277
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=63.50 E-value=1.5 Score=35.56 Aligned_cols=38 Identities=16% Similarity=0.426 Sum_probs=23.9
Q ss_pred CeeecCCCCcc---ccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 16 QEYICPNCQRR---YNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 16 ~~Y~CP~C~~~---YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
....||+||.. |..+..-.-=.+++--|.|..||..+.
T Consensus 71 ~~~~Cp~C~~~~a~~~q~q~rsade~mt~fy~C~~C~~~w~ 111 (113)
T 3h0g_I 71 SDKECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFE 111 (113)
T ss_dssp CCSCCSSSCCSCEEEECCCCSSCCCCCCCEEEESSSCCCCC
T ss_pred cccCCCCCCCceEEEEEEecccCCCCCeeEEEcCCCCCEEe
Confidence 34889999875 222221111224556799999999874
No 278
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=62.94 E-value=3.5 Score=29.09 Aligned_cols=37 Identities=19% Similarity=0.708 Sum_probs=25.5
Q ss_pred eeec--CCCCccccHHHHHhh---cCCCCCCeeccC--CCcccc
Q 020131 17 EYIC--PNCQRRYNALDALRL---VSLEDDSFHCEN--CNGELV 53 (330)
Q Consensus 17 ~Y~C--P~C~~~YT~lDA~~L---ld~~~~~F~C~~--Cg~eL~ 53 (330)
.|.| +.|++.|.....+.. .-.....|.|+. |+....
T Consensus 1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~ 44 (85)
T 2j7j_A 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFS 44 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEES
T ss_pred CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccC
Confidence 3899 999999986555432 111234699988 997764
No 279
>3ir9_A Peptide chain release factor subunit 1; structural genomics, APC36528.1, C-terminal domain, PSI-2, protein structure initiative; 2.21A {Methanosarcina mazei}
Probab=62.90 E-value=1.1 Score=38.74 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=22.0
Q ss_pred CCeeecCCCCcc-----ccHHHHHhhcCCCCCCeeccCCCcccccc
Q 020131 15 VQEYICPNCQRR-----YNALDALRLVSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 15 ~~~Y~CP~C~~~-----YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~ 55 (330)
+-.|+||+|+.. +...+. .....|.||.||.+|...
T Consensus 76 r~~~~c~~~~~~~~~~~~~~~~~-----~~~~~~~c~~~g~~~~~~ 116 (166)
T 3ir9_A 76 RVTTKCSVCGYENKWTRRWKPGE-----PAPAAGNCPKCGSSLEVT 116 (166)
T ss_dssp EEEEEESSSSCEEEEEECCCC-------CCCCCCBCTTTCCBEEEE
T ss_pred EEEEECCCCCceeEEEeecChhh-----cccccccccccCccchhh
Confidence 447999999952 111110 111368999999998653
No 280
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=62.58 E-value=4.3 Score=40.99 Aligned_cols=35 Identities=11% Similarity=0.127 Sum_probs=27.3
Q ss_pred CCCeeecCC-CC-ccccHHHHHhhcCCCCCCeeccCCCccccccc
Q 020131 14 TVQEYICPN-CQ-RRYNALDALRLVSLEDDSFHCENCNGELVAES 56 (330)
Q Consensus 14 ~~~~Y~CP~-C~-~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~ 56 (330)
..+.|+|.+ |+ .+|++.+|.-. -|..||+.++...
T Consensus 4 ~~M~y~str~~~~~~~~~~~a~l~--------g~a~dGGl~~p~~ 40 (514)
T 1kl7_A 4 ASQVYRSTRSSSPKTISFEEAIIQ--------GLATDGGLFIPPT 40 (514)
T ss_dssp TTSCBEETTCCSSCCBCHHHHHHH--------CSCTTSCCEECSS
T ss_pred cCeEEEecCCCCCCccCHHHHHHh--------CCcCCCCeeeccc
Confidence 346799998 99 99999888543 4777998887654
No 281
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=62.41 E-value=3 Score=31.26 Aligned_cols=31 Identities=16% Similarity=0.511 Sum_probs=25.6
Q ss_pred eecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
-+||.|++.=+ .||.....-.|..||..|..
T Consensus 8 VKCp~C~niq~------VFShA~tvV~C~~Cg~~L~~ 38 (66)
T 1qxf_A 8 VKCPDCEHEQV------IFDHPSTIVKCIICGRTVAE 38 (66)
T ss_dssp EECTTTCCEEE------EESSCSSCEECSSSCCEEEE
T ss_pred EECCCCCCceE------EEecCceEEEcccCCCEEee
Confidence 47999998765 46777778999999999965
No 282
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=62.06 E-value=3.3 Score=28.24 Aligned_cols=22 Identities=27% Similarity=0.711 Sum_probs=17.0
Q ss_pred CCCCeeecCCCCccccHHHHHh
Q 020131 13 NTVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 13 ~~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
.....|.|+.|++.|+....+.
T Consensus 36 ~~~~~~~C~~C~k~f~~~~~L~ 57 (66)
T 2drp_A 36 RNVKVYPCPFCFKEFTRKDNMT 57 (66)
T ss_dssp SSCCCEECTTTCCEESCHHHHH
T ss_pred CCCcCeECCCCCCccCCHHHHH
Confidence 3556899999999998765543
No 283
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=61.63 E-value=3.3 Score=29.09 Aligned_cols=33 Identities=24% Similarity=0.539 Sum_probs=21.8
Q ss_pred cCCCCeeecCCCCcc-ccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 12 KNTVQEYICPNCQRR-YNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 12 ~~~~~~Y~CP~C~~~-YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
...+..=.||.||.. |.. +....+.|+.||...
T Consensus 14 kv~~~~k~CP~CG~~~fm~--------~~~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 14 KVIRKNKFCPRCGPGVFMA--------DHGDRWACGKCGYTE 47 (50)
T ss_dssp CEECSSEECSSSCSSCEEE--------ECSSEEECSSSCCEE
T ss_pred EEEEecccCCCCCCceEEe--------cCCCeEECCCCCCEE
Confidence 344556789999984 211 123579999999754
No 284
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=61.54 E-value=2.9 Score=30.55 Aligned_cols=26 Identities=23% Similarity=0.552 Sum_probs=19.1
Q ss_pred CCCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCc
Q 020131 13 NTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNG 50 (330)
Q Consensus 13 ~~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~ 50 (330)
.....-.||.||.-.-. .++|+.||.
T Consensus 26 ~~p~l~~c~~cG~~~~p------------H~vc~~CG~ 51 (60)
T 2zjr_Z 26 TAPNLTECPQCHGKKLS------------HHICPNCGY 51 (60)
T ss_dssp CCCCCEECTTTCCEECT------------TBCCTTTCB
T ss_pred cCCCceECCCCCCEeCC------------ceEcCCCCc
Confidence 34556789999986322 699999993
No 285
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=61.14 E-value=1.3 Score=38.00 Aligned_cols=31 Identities=23% Similarity=0.745 Sum_probs=16.1
Q ss_pred ecCCCCccccH--HHHHhhcCCCCCCeeccCCC
Q 020131 19 ICPNCQRRYNA--LDALRLVSLEDDSFHCENCN 49 (330)
Q Consensus 19 ~CP~C~~~YT~--lDA~~Lld~~~~~F~C~~Cg 49 (330)
.||.|+..|.. =.+=.|+|+....|+|+.||
T Consensus 73 ~C~~Cg~~f~~Y~C~~C~l~d~~k~~yHC~~Cg 105 (143)
T 2dkt_A 73 TCEDCSTLFGEYYCSICHLFDKDKRQYHCESCG 105 (143)
T ss_dssp BCSSSCCBSCSEECSSSCCEECSSSEEEETTTT
T ss_pred cCCCCCccceeeEeceeecccCCCceecCCCCC
Confidence 35555554442 12223445555667777776
No 286
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=59.76 E-value=5.3 Score=28.26 Aligned_cols=26 Identities=12% Similarity=0.368 Sum_probs=18.8
Q ss_pred HhhcCCCCeeecCCCCccccHHHHHh
Q 020131 9 LECKNTVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 9 l~~~~~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
++-=+....|.|+.|++.|+....+.
T Consensus 24 ~~~Ht~ekp~~C~~C~k~F~~~~~L~ 49 (60)
T 4gzn_C 24 RRAHLGYRPRSCPECGKCFRDQSEVN 49 (60)
T ss_dssp HHHHHTCCCEECTTTCCEESSHHHHH
T ss_pred HHHhCCCcCeECCCCCCCcCCHHHHH
Confidence 33334456899999999999766554
No 287
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=59.69 E-value=9.6 Score=32.57 Aligned_cols=60 Identities=22% Similarity=0.412 Sum_probs=39.0
Q ss_pred eecCCCCccccHHHHHhhcCCCCCCeeccCCCc-cccccchhhhhhcCCCCChhHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 020131 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNG-ELVAESDKLAAQEGGDGDDNARRRRREKLKDLLQKLEVHLKPLMEQ 96 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~-eL~~~~~~~~~~e~~~g~~na~r~~~e~~k~~l~r~n~QlkpI~~~ 96 (330)
-.||.|+..|.. .+.|.... .|+.|+. +|....+.. .+.++.++..|..+..||+++
T Consensus 133 ~~~~~~g~~y~~-----~~~pp~~~-~~d~~~~~~l~~r~dd~----------------~~~~~~rl~~~~~~~~~l~~~ 190 (220)
T 1aky_A 133 LIHPASGRSYHK-----IFNPPKED-MKDDVTGEALVQRSDDN----------------ADALKKRLAAYHAQTEPIVDF 190 (220)
T ss_dssp EECTTTCCEEET-----TTBCCSST-TBCTTTCCBCBCCTTCS----------------HHHHHHHHHHHHHHTTHHHHH
T ss_pred CccCccCCcccc-----ccCCCccc-ccccccccccccCCCCC----------------HHHHHHHHHHHHHHHHHHHHH
Confidence 459999999985 24554333 5887764 665432211 123456678899999998888
Q ss_pred HHh
Q 020131 97 INR 99 (330)
Q Consensus 97 Lk~ 99 (330)
.++
T Consensus 191 y~~ 193 (220)
T 1aky_A 191 YKK 193 (220)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 288
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=59.39 E-value=3.3 Score=35.96 Aligned_cols=29 Identities=24% Similarity=0.769 Sum_probs=21.7
Q ss_pred CeeecCC--CCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 16 QEYICPN--CQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 16 ~~Y~CP~--C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
-+.-||. |+++-+. ..++.|+|+.|+...
T Consensus 42 ~Y~aC~~~~CnKKv~~--------~~~g~~~CekC~~~~ 72 (181)
T 1l1o_C 42 MYQACPTQDCNKKVID--------QQNGLYRCEKCDTEF 72 (181)
T ss_dssp EEEBCCSTTCCCBCEE--------ETTTEEEETTTTEEE
T ss_pred EECCCCchhcCCcccc--------CCCCeEECCCCCCcC
Confidence 3567999 9998762 234679999999763
No 289
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=59.17 E-value=6 Score=34.82 Aligned_cols=14 Identities=36% Similarity=0.928 Sum_probs=10.6
Q ss_pred eecCCCCccccHHH
Q 020131 18 YICPNCQRRYNALD 31 (330)
Q Consensus 18 Y~CP~C~~~YT~lD 31 (330)
-.||.|++.|...+
T Consensus 3 ~~CpiC~k~Y~~~~ 16 (183)
T 3lqh_A 3 NFCPLCDKCYDDDD 16 (183)
T ss_dssp CBCTTTCCBCTTCC
T ss_pred CcCCCCcCccCCcc
Confidence 35999998887655
No 290
>1y07_A Desulfoferrodoxin (RBO); beta-sheet, iron binding, oxidoreductase; 1.55A {Treponema pallidum subsp}
Probab=58.69 E-value=1 Score=37.54 Aligned_cols=35 Identities=11% Similarity=0.052 Sum_probs=20.1
Q ss_pred CCCeeecCC-CCccccHHHHHhhcCCCCCCeeccCCCccccccc
Q 020131 14 TVQEYICPN-CQRRYNALDALRLVSLEDDSFHCENCNGELVAES 56 (330)
Q Consensus 14 ~~~~Y~CP~-C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~ 56 (330)
..++|+|+. ||..+.. +....+.+.| ||.+|..-.
T Consensus 4 ~~~fYkC~~~CGnivev------~~~g~~~l~C--CG~~m~~l~ 39 (128)
T 1y07_A 4 ELSFFLQKESAGFFLGM------DAPAGSSVAC--GSEVLRAVP 39 (128)
T ss_dssp CEEEECC-----CEEEE------SCCTTCEEEE--TTEEEECCC
T ss_pred cCcEEECCCCCCCEEEE------EcCCCcceee--cCccccccc
Confidence 346999999 9998854 2223345667 999886533
No 291
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=58.60 E-value=3.9 Score=23.43 Aligned_cols=18 Identities=28% Similarity=0.894 Sum_probs=13.9
Q ss_pred eeecC--CCCccccHHHHHh
Q 020131 17 EYICP--NCQRRYNALDALR 34 (330)
Q Consensus 17 ~Y~CP--~C~~~YT~lDA~~ 34 (330)
.|.|+ .|++.|+....+.
T Consensus 2 p~~C~~~~C~k~f~~~~~L~ 21 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQ 21 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHH
T ss_pred CcCCcCCCCCcccCCHhHHH
Confidence 48998 9999998655543
No 292
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=58.44 E-value=3.7 Score=31.11 Aligned_cols=37 Identities=16% Similarity=-0.016 Sum_probs=25.4
Q ss_pred CCeeecCC------------CCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 15 VQEYICPN------------CQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 15 ~~~Y~CP~------------C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
...|.||. ||..|--.=....+. +.+.||.|+.+|..
T Consensus 12 p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~---~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLL---NSPTDPFNRQMLTE 60 (85)
T ss_dssp CTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHH---HCSBCTTTCCBCCG
T ss_pred chheECcccCchhcCCeECCCCCEECHHHHHHHHh---cCCCCCCCcCCCCh
Confidence 45788886 666666544444443 25899999999965
No 293
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=57.88 E-value=6.6 Score=30.66 Aligned_cols=37 Identities=11% Similarity=0.015 Sum_probs=27.0
Q ss_pred CCeeecCC------------CC-ccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 15 VQEYICPN------------CQ-RRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 15 ~~~Y~CP~------------C~-~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
...|.||. || ..|--.=+...+.. .+.||.|+.+|..
T Consensus 20 p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~---~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS---DQTDPFNRSPLTM 69 (98)
T ss_dssp CTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT---SCBCTTTCSBCCT
T ss_pred cHhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh---CCCCCCCCCCCCh
Confidence 45788986 66 77776555566553 5799999999964
No 294
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=57.88 E-value=3.9 Score=30.38 Aligned_cols=30 Identities=23% Similarity=0.484 Sum_probs=25.3
Q ss_pred ecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 19 ICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 19 ~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
+||.|++.=+ .||.....-.|..||+.|..
T Consensus 17 kCp~C~~~q~------VFSha~t~V~C~~Cgt~L~~ 46 (63)
T 3j20_W 17 KCIDCGNEQI------VFSHPATKVRCLICGATLVE 46 (63)
T ss_dssp ECSSSCCEEE------EESSCSSCEECSSSCCEEEE
T ss_pred ECCCCCCeeE------EEecCCeEEEccCcCCEEec
Confidence 6999998755 47777778999999999965
No 295
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.78 E-value=3.5 Score=29.85 Aligned_cols=21 Identities=29% Similarity=0.710 Sum_probs=14.5
Q ss_pred CCeeecCCCCccccHHHHHhh
Q 020131 15 VQEYICPNCQRRYNALDALRL 35 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L 35 (330)
...|.||+|+.+|=.+.=...
T Consensus 21 ~~kY~CPrC~~~yCSl~C~k~ 41 (56)
T 2yqq_A 21 KPKYRCPACRVPYCSVVCFRK 41 (56)
T ss_dssp CCSEECTTTCCEESSHHHHHH
T ss_pred CCeeeCCCCCCCeeCHHHHHH
Confidence 356888888888866655443
No 296
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=57.71 E-value=5 Score=31.49 Aligned_cols=36 Identities=19% Similarity=0.357 Sum_probs=24.8
Q ss_pred CCeeecCCCCccccHHHHHhh----cCCCCCCeeccCCCc
Q 020131 15 VQEYICPNCQRRYNALDALRL----VSLEDDSFHCENCNG 50 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L----ld~~~~~F~C~~Cg~ 50 (330)
...|.|+.|++.|+....+.. +-...-.|.|..|..
T Consensus 48 ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~ 87 (102)
T 2ghf_A 48 NSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR 87 (102)
T ss_dssp SCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred CCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence 457999999999986655532 222234699998653
No 297
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=57.44 E-value=2.9 Score=29.65 Aligned_cols=17 Identities=18% Similarity=0.575 Sum_probs=13.4
Q ss_pred CCCCeeecCCCCccccH
Q 020131 13 NTVQEYICPNCQRRYNA 29 (330)
Q Consensus 13 ~~~~~Y~CP~C~~~YT~ 29 (330)
....+|+|+.|+.+|..
T Consensus 39 p~T~fy~C~~Cg~~w~~ 55 (57)
T 1qyp_A 39 PSTIFYKCTKCGHTWRS 55 (57)
T ss_dssp SSEEEEEESSSCCEEEC
T ss_pred CCcEEEEcCCCCCEecc
Confidence 34469999999999863
No 298
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=56.88 E-value=4.9 Score=35.29 Aligned_cols=42 Identities=7% Similarity=-0.091 Sum_probs=26.9
Q ss_pred hcCCCCeeecCC------------CCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 11 CKNTVQEYICPN------------CQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 11 ~~~~~~~Y~CP~------------C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
...-+..|.||. ||..|.-.=....+.. ++..||.|+.+|..
T Consensus 100 ~~~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~--~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 100 KREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQR--VGHFDPVTRSPLTQ 153 (179)
T ss_dssp CCCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH--TCSBCTTTCCBCCG
T ss_pred ccCCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHh--CCCCCCCCcCCCCh
Confidence 344567899997 5666665444444432 13369999999964
No 299
>3v2d_5 50S ribosomal protein L32; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_4 2hgj_4 2hgu_4 2j03_5 2jl6_5 2jl8_5 2v47_5 2v49_5 2wdi_5 2wdj_5 2wdl_5 2wdn_5 2wh2_5 2wh4_5 2wrj_5 2wrl_5 2wro_5 2wrr_5 2x9s_5 2x9u_5 ...
Probab=56.36 E-value=5.1 Score=29.28 Aligned_cols=25 Identities=20% Similarity=0.530 Sum_probs=18.4
Q ss_pred CCCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCC
Q 020131 13 NTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCN 49 (330)
Q Consensus 13 ~~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg 49 (330)
.....-.||.||.---. -+.|+.||
T Consensus 26 ~~p~l~~c~~cGe~~~~------------H~vc~~CG 50 (60)
T 3v2d_5 26 TPPTLVPCPECKAMKPP------------HTVCPECG 50 (60)
T ss_dssp CCCCCEECTTTCCEECT------------TSCCTTTC
T ss_pred cCCceeECCCCCCeecc------------eEEcCCCC
Confidence 34557789999984322 68999999
No 300
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.85 E-value=8.4 Score=26.46 Aligned_cols=25 Identities=16% Similarity=0.191 Sum_probs=18.0
Q ss_pred HHHHHhhcCCCCeeecC-CCCccccHH
Q 020131 5 LKDELECKNTVQEYICP-NCQRRYNAL 30 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP-~C~~~YT~l 30 (330)
|..-++. .....|.|+ .|++.|+..
T Consensus 25 L~~H~~~-~~~~p~~C~~~C~k~f~~~ 50 (66)
T 2eod_A 25 IQSHQYQ-CPRLPVACPNQCGVGTVAR 50 (66)
T ss_dssp HHHHHHH-CSSSEEECTTCCSCCEEET
T ss_pred HHHHHHH-cCCcCccCCcccCcccccH
Confidence 4444444 566789999 999999753
No 301
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=55.47 E-value=13 Score=29.56 Aligned_cols=38 Identities=21% Similarity=0.673 Sum_probs=19.1
Q ss_pred CCeeecCC--CCccccHHHHHhh-c--CCCCCCeeccC--CCccc
Q 020131 15 VQEYICPN--CQRRYNALDALRL-V--SLEDDSFHCEN--CNGEL 52 (330)
Q Consensus 15 ~~~Y~CP~--C~~~YT~lDA~~L-l--d~~~~~F~C~~--Cg~eL 52 (330)
...|.|+. |++.|.....+.. + -.....|.|+. |+...
T Consensus 88 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f 132 (155)
T 2rpc_A 88 EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRF 132 (155)
T ss_dssp CCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCB
T ss_pred CCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCcc
Confidence 34566765 7766664443321 1 11122467765 66554
No 302
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=55.17 E-value=3.6 Score=39.07 Aligned_cols=7 Identities=43% Similarity=1.341 Sum_probs=2.9
Q ss_pred cCCCCcc
Q 020131 20 CPNCQRR 26 (330)
Q Consensus 20 CP~C~~~ 26 (330)
||.||..
T Consensus 185 CPvCGs~ 191 (309)
T 2fiy_A 185 CPACGSP 191 (309)
T ss_dssp CTTTCCC
T ss_pred CCCCCCc
Confidence 4444443
No 303
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=54.96 E-value=2 Score=35.27 Aligned_cols=41 Identities=20% Similarity=0.408 Sum_probs=25.6
Q ss_pred CeeecCCCCcc---ccHHHHHhhcCCCCCCeeccCCCccccccc
Q 020131 16 QEYICPNCQRR---YNALDALRLVSLEDDSFHCENCNGELVAES 56 (330)
Q Consensus 16 ~~Y~CP~C~~~---YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~ 56 (330)
....||.||.. |..+..-.-=.|++--|.|..||..+..+.
T Consensus 71 t~~~Cp~C~~~~a~~~q~q~rsade~~t~fy~C~~C~~~w~~nn 114 (122)
T 1twf_I 71 SDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQ 114 (122)
T ss_dssp CCCCCTTTCCCCEEEEECSSCCTTCCCCEEEEETTTCCEEECCT
T ss_pred cCCCCCCCCCCEEEEEEecCccCCCCceEEEEeCCCCCEeccCC
Confidence 35889999986 222111111124455689999999997654
No 304
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=54.85 E-value=8.3 Score=30.57 Aligned_cols=40 Identities=13% Similarity=0.508 Sum_probs=19.5
Q ss_pred CCCCeeecCC--CCccccHHHHHhh----cCCCCCCeeccC--CCccc
Q 020131 13 NTVQEYICPN--CQRRYNALDALRL----VSLEDDSFHCEN--CNGEL 52 (330)
Q Consensus 13 ~~~~~Y~CP~--C~~~YT~lDA~~L----ld~~~~~F~C~~--Cg~eL 52 (330)
.....|.|+. |++.|+....+.. +-.....|.|+. |+...
T Consensus 93 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f 140 (155)
T 2gli_A 93 TGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRY 140 (155)
T ss_dssp TTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEE
T ss_pred CCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCcccc
Confidence 3344566665 6666654333221 111223466766 66554
No 305
>2ds5_A CLPX, ATP-dependent CLP protease ATP-binding subunit CLPX; treble cleft zinc finger, metal binding protein, protein binding; HET: PG4; 1.50A {Escherichia coli} SCOP: g.39.1.11 PDB: 2ds6_A 2ds8_A 2ds7_A
Probab=54.17 E-value=1.4 Score=31.32 Aligned_cols=29 Identities=17% Similarity=0.614 Sum_probs=21.8
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCC
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENC 48 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~C 48 (330)
.+.|..||+.-+ ++..|+.-. +.|+|..|
T Consensus 11 ~~~CSFCGk~~~--ev~~LIaGp-gv~IC~eC 39 (51)
T 2ds5_A 11 LLYCSFCGKSQH--EVRKLIAGP-SVYICDEC 39 (51)
T ss_dssp CCBCTTTCCBTT--TSSCEEECS-SCEEEHHH
T ss_pred CcEecCCCCCHH--HhcccCCCC-CCEehHHH
Confidence 468999999654 577776542 57999988
No 306
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=54.13 E-value=13 Score=26.35 Aligned_cols=39 Identities=18% Similarity=0.586 Sum_probs=27.0
Q ss_pred CCeeecCC--CCccccHHHHHhh---cCCCCCCeecc--CCCcccc
Q 020131 15 VQEYICPN--CQRRYNALDALRL---VSLEDDSFHCE--NCNGELV 53 (330)
Q Consensus 15 ~~~Y~CP~--C~~~YT~lDA~~L---ld~~~~~F~C~--~Cg~eL~ 53 (330)
...|.|+. |++.|.....+.. .-.....|.|+ .|+....
T Consensus 3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~ 48 (89)
T 2wbs_A 3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFA 48 (89)
T ss_dssp CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEES
T ss_pred CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccC
Confidence 35799999 9999986655532 11223469997 5998764
No 307
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=53.98 E-value=8.2 Score=28.17 Aligned_cols=30 Identities=20% Similarity=0.458 Sum_probs=20.1
Q ss_pred HHHHHhhcCCCCeeecCCCCccccHHHHHh
Q 020131 5 LKDELECKNTVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
|..-++.-.....|.|+.|++.|.....+.
T Consensus 63 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~ 92 (100)
T 2ebt_A 63 LTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92 (100)
T ss_dssp HHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred HHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence 333344444456799999999998765553
No 308
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=53.22 E-value=9.2 Score=26.72 Aligned_cols=40 Identities=20% Similarity=0.453 Sum_probs=27.7
Q ss_pred CCCeeecCC--CCccccHHHHHhh----cCCCCCCeeccC--CCcccc
Q 020131 14 TVQEYICPN--CQRRYNALDALRL----VSLEDDSFHCEN--CNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~--C~~~YT~lDA~~L----ld~~~~~F~C~~--Cg~eL~ 53 (330)
....|.|+. |++.|+....+.. .-.....|.|+. |+....
T Consensus 4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~ 51 (79)
T 2dlk_A 4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFN 51 (79)
T ss_dssp CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEES
T ss_pred CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccC
Confidence 345799986 9999986555532 122334699999 998774
No 309
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=53.02 E-value=9.8 Score=28.98 Aligned_cols=33 Identities=15% Similarity=0.330 Sum_probs=20.2
Q ss_pred CCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 14 TVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
+..++.||.|+..+... +....+.|+.|+...-
T Consensus 22 ~~~~~wCP~C~~~~~~~-------~~~~~v~C~~C~~~FC 54 (86)
T 2ct7_A 22 DPKFLWCAQCSFGFIYE-------REQLEATCPQCHQTFC 54 (86)
T ss_dssp CCCEECCSSSCCCEECC-------CSCSCEECTTTCCEEC
T ss_pred CCCEeECcCCCchheec-------CCCCceEeCCCCCccc
Confidence 34455699999877432 2223477887776553
No 310
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=52.71 E-value=4.6 Score=22.29 Aligned_cols=17 Identities=41% Similarity=0.938 Sum_probs=13.1
Q ss_pred eeecC--CCCccccHHHHH
Q 020131 17 EYICP--NCQRRYNALDAL 33 (330)
Q Consensus 17 ~Y~CP--~C~~~YT~lDA~ 33 (330)
.|.|+ .|++.|+....+
T Consensus 2 ~~~C~~~~C~k~f~~~~~l 20 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKL 20 (29)
T ss_dssp CEEECSTTTCEEESSHHHH
T ss_pred CCCCcCCcCcCccCCHHHH
Confidence 48999 999999865443
No 311
>2avu_E Flagellar transcriptional activator FLHC; C4-type zinc finger, transcription activator; 3.00A {Escherichia coli} SCOP: e.64.1.1
Probab=51.99 E-value=4.2 Score=36.31 Aligned_cols=30 Identities=23% Similarity=0.429 Sum_probs=19.3
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNG 50 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~ 50 (330)
+.-.|..|+..|-. ...-....|.|+.|..
T Consensus 133 ~l~~C~~Cgg~fv~-----~~~~~~~~f~Cp~C~~ 162 (192)
T 2avu_E 133 QLSSCNCCGGNFIT-----HAHQPVGSFACSLCQP 162 (192)
T ss_dssp EEEECTTTCCEEEE-----ESSCCSSCCCCTTC--
T ss_pred eeCcCCCCCCCeeC-----ccCCCCCCCcCCCCCC
Confidence 45679999999853 1111235899999993
No 312
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=50.97 E-value=3.2 Score=34.84 Aligned_cols=38 Identities=24% Similarity=0.479 Sum_probs=0.0
Q ss_pred eeecCCCCcccc---HHHHHhhcCCCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYN---ALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT---~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
...||.|+..=. ++..-.-=.|++--|+|..||..+.+
T Consensus 92 ~~~CpkCg~~~a~f~q~Q~RsaDE~mT~fy~C~~C~~~w~e 132 (133)
T 3qt1_I 92 DRECPKCHSRENVFFQLQIRSADEPMTTFYKCVNCGHRWKE 132 (133)
T ss_dssp -----------------------------------------
T ss_pred cCCCCCCCCceEEEEEEeeecCCCCCcEEEEcCCCCCEeCc
Confidence 478999986432 22221222245567999999998753
No 313
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=50.41 E-value=6.5 Score=28.64 Aligned_cols=37 Identities=14% Similarity=0.158 Sum_probs=23.6
Q ss_pred CCeeecCCCCccccHHHHHhh--cCCCCCCeeccCCCcc
Q 020131 15 VQEYICPNCQRRYNALDALRL--VSLEDDSFHCENCNGE 51 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L--ld~~~~~F~C~~Cg~e 51 (330)
...|.|+.|++.|+....+.. .....+.+.|..|...
T Consensus 11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~~~ 49 (66)
T 2epp_A 11 AGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDLP 49 (66)
T ss_dssp CCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCCCC
T ss_pred ccCcCCCCCCCccCCHHHHHhhhhhhCCCccccccccCC
Confidence 357999999999986555432 1234455666666643
No 314
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=50.36 E-value=12 Score=30.88 Aligned_cols=17 Identities=18% Similarity=0.716 Sum_probs=8.5
Q ss_pred CeeecC--CCCccccHHHH
Q 020131 16 QEYICP--NCQRRYNALDA 32 (330)
Q Consensus 16 ~~Y~CP--~C~~~YT~lDA 32 (330)
..|.|+ .|++.|.....
T Consensus 71 ~~~~C~~~~C~~~f~~~~~ 89 (190)
T 1tf6_A 71 KNFTCDSDGCDLRFTTKAN 89 (190)
T ss_dssp CCEECCSSSCCCEESCHHH
T ss_pred CceeCCCCCCCCccCCHHH
Confidence 345555 55555554333
No 315
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=50.29 E-value=5.1 Score=22.98 Aligned_cols=17 Identities=24% Similarity=0.679 Sum_probs=13.4
Q ss_pred eeecC--CCCccccHHHHH
Q 020131 17 EYICP--NCQRRYNALDAL 33 (330)
Q Consensus 17 ~Y~CP--~C~~~YT~lDA~ 33 (330)
.|.|+ .|++.|+....+
T Consensus 3 ~~~C~~~~C~k~f~~~~~L 21 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDL 21 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHH
T ss_pred CCcCcCCCCCCccCCHHHH
Confidence 59999 899999865444
No 316
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=49.96 E-value=5.4 Score=28.17 Aligned_cols=19 Identities=21% Similarity=0.595 Sum_probs=15.6
Q ss_pred CeeecCCCCccccHHHHHh
Q 020131 16 QEYICPNCQRRYNALDALR 34 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~ 34 (330)
..|.|+.|++.|.....+.
T Consensus 44 ~~~~C~~C~~~f~~~~~L~ 62 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKSDLG 62 (77)
T ss_dssp SSEECSSSSCEESSHHHHH
T ss_pred CccCCCCCCCccCCHHHHH
Confidence 5799999999998766554
No 317
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=49.71 E-value=10 Score=28.29 Aligned_cols=13 Identities=15% Similarity=0.690 Sum_probs=11.3
Q ss_pred CeeccCCCccccc
Q 020131 42 SFHCENCNGELVA 54 (330)
Q Consensus 42 ~F~C~~Cg~eL~~ 54 (330)
.+.|+.||..+..
T Consensus 36 ~~~C~~CGE~~~~ 48 (78)
T 3ga8_A 36 GLYCVHCEESIMN 48 (78)
T ss_dssp EEEETTTCCEECC
T ss_pred eEECCCCCCEEEC
Confidence 6899999999865
No 318
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.58 E-value=7.2 Score=27.48 Aligned_cols=20 Identities=20% Similarity=0.625 Sum_probs=16.3
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|.....+.
T Consensus 36 ~~~~~C~~C~k~f~~~~~L~ 55 (78)
T 2d9h_A 36 ALRFPCEFCGKRFEKPDSVA 55 (78)
T ss_dssp TCCEECTTTCCEESSHHHHH
T ss_pred CcccCCCCCCchhCCHHHHH
Confidence 35799999999999766664
No 319
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=49.45 E-value=4.9 Score=43.46 Aligned_cols=34 Identities=26% Similarity=0.728 Sum_probs=25.6
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNG 50 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~ 50 (330)
..|.||.||..|..++. ++||+..-.=.||.|.+
T Consensus 248 ~~~~c~~~~~~~~~~~~-~~fsfn~p~g~C~~C~G 281 (916)
T 3pih_A 248 ENLMCPVCGIGFPEITP-KLFSFNSPYGACPNCHG 281 (916)
T ss_dssp SSCBCTTTCCCCCCCSG-GGGCTTSTTTBCTTTTT
T ss_pred ccccCcccCCccCCCCH-hhcCCCCCCCcCCeeec
Confidence 46889999999876654 35666554568999985
No 320
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=49.24 E-value=6.4 Score=30.60 Aligned_cols=30 Identities=27% Similarity=0.579 Sum_probs=25.2
Q ss_pred ecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 19 ICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 19 ~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
+||.|+..=+ .||.....-.|..||+.|..
T Consensus 34 kCp~C~n~q~------VFShA~t~V~C~~Cg~~L~~ 63 (81)
T 2xzm_6 34 KCAQCQNIQM------IFSNAQSTIICEKCSAILCK 63 (81)
T ss_dssp ECSSSCCEEE------EETTCSSCEECSSSCCEEEE
T ss_pred ECCCCCCeeE------EEecCccEEEccCCCCEEee
Confidence 8999998765 46777778999999999965
No 321
>1u5k_A Hypothetical protein; OBD-fold, Zn-binding, recombination,replication; 2.00A {Deinococcus radiodurans} SCOP: b.40.4.13 g.45.1.2 PDB: 1w3s_A 2v1c_C
Probab=49.19 E-value=5.5 Score=35.60 Aligned_cols=30 Identities=13% Similarity=0.310 Sum_probs=24.0
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~e 51 (330)
.-.|..||.. ..-.|++..|.|.|+.|...
T Consensus 150 l~~C~~cg~~-----~~~~fs~~~Gg~~c~~~~~~ 179 (244)
T 1u5k_A 150 TARCARCGAP-----DPEHPDPLGGQLLCSKCAAL 179 (244)
T ss_dssp CSBCTTTCCB-----SCCEECTTTSSEECTTTCSS
T ss_pred cCccccCCCC-----CCCcEecccCEEECcccCCC
Confidence 4479999986 23468999999999999764
No 322
>1h7b_A Anaerobic ribonucleotide-triphosphate reductase large chain; oxidoreductase, allosteric regulation, substrate specificity; 2.45A {Bacteriophage T4} SCOP: c.7.1.3 PDB: 1h79_A* 1h7a_A* 1h78_A 1hk8_A*
Probab=49.13 E-value=3.8 Score=42.36 Aligned_cols=33 Identities=15% Similarity=0.402 Sum_probs=6.6
Q ss_pred cCCCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcc
Q 020131 12 KNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 12 ~~~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~e 51 (330)
..+..+=+||.||..-. +..+...+.||.||..
T Consensus 535 ~~n~~~~~C~~CGy~~~-------~~~~~~~~~CP~Cg~~ 567 (605)
T 1h7b_A 535 GVNMPVDKCFTCGSTHE-------MTPTENGFVCSICGET 567 (605)
T ss_dssp EEECCEEET-------------------------------
T ss_pred EeCCCCccCcccCCcCc-------cCccccCCcCCCCCCC
Confidence 44677889999995221 1111125899999963
No 323
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=48.88 E-value=3.8 Score=29.40 Aligned_cols=27 Identities=22% Similarity=0.647 Sum_probs=19.6
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeecc--CCCcc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCE--NCNGE 51 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~--~Cg~e 51 (330)
....||.|+......+ +.++|+ .||..
T Consensus 9 ~iL~CP~c~~~L~~~~---------~~L~C~~~~c~~~ 37 (56)
T 2kpi_A 9 EILACPACHAPLEERD---------AELICTGQDCGLA 37 (56)
T ss_dssp TSCCCSSSCSCEEEET---------TEEEECSSSCCCE
T ss_pred hheeCCCCCCcceecC---------CEEEcCCcCCCcE
Confidence 3578999998654322 679999 89844
No 324
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=48.79 E-value=9.9 Score=27.45 Aligned_cols=40 Identities=13% Similarity=0.188 Sum_probs=26.9
Q ss_pred CCCCeeecCCCCccccHHHHHhhc--CCCCCCeeccCCCccc
Q 020131 13 NTVQEYICPNCQRRYNALDALRLV--SLEDDSFHCENCNGEL 52 (330)
Q Consensus 13 ~~~~~Y~CP~C~~~YT~lDA~~Ll--d~~~~~F~C~~Cg~eL 52 (330)
.....|.|+.|++.|+....+..- ......|.|+.|+...
T Consensus 27 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f 68 (88)
T 1llm_C 27 TGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELL 68 (88)
T ss_dssp HCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 344579999999999876665421 1112358999997654
No 325
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=48.78 E-value=14 Score=29.21 Aligned_cols=50 Identities=18% Similarity=0.480 Sum_probs=30.3
Q ss_pred HHHHHhhcCCCCeeecCC--CCccccHHHHHhh---cCCCCCCeeccC--CCccccc
Q 020131 5 LKDELECKNTVQEYICPN--CQRRYNALDALRL---VSLEDDSFHCEN--CNGELVA 54 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP~--C~~~YT~lDA~~L---ld~~~~~F~C~~--Cg~eL~~ 54 (330)
|..-++.-.....|.|+. |++.|.....+.. .-.....|.|+. |+.....
T Consensus 55 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~ 111 (155)
T 2gli_A 55 LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSN 111 (155)
T ss_dssp HHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESS
T ss_pred HHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCC
Confidence 333333334445799984 9999986555432 112234699998 9877643
No 326
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=48.24 E-value=4.2 Score=32.26 Aligned_cols=30 Identities=37% Similarity=0.683 Sum_probs=22.6
Q ss_pred CCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 15 VQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
.-||.|+ |+.+-+.++ .| | .-.|+.||..-
T Consensus 46 KRFFkC~-C~~Rt~sl~--r~--P---~~~C~~Cg~~~ 75 (92)
T 2kwq_A 46 KRFFKCP-CGNRTISLD--RL--P---KKHCSTCGLFK 75 (92)
T ss_dssp CEEEECT-TSCEEEESS--SS--C---CSCCTTTCSCC
T ss_pred EEEEECC-CCCceeEee--eC--C---CCCCCCCCCCc
Confidence 3589998 999998873 33 2 35899999875
No 327
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.10 E-value=14 Score=27.78 Aligned_cols=42 Identities=21% Similarity=0.321 Sum_probs=32.3
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccchh
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESDK 58 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~~ 58 (330)
....|+.|+.+|...=+...|... ..=.||.|+.++......
T Consensus 27 ~g~~C~~C~h~fH~~Ci~kWl~~~-~~~~CP~Cr~~w~~~~~~ 68 (74)
T 2ct0_A 27 QGQSCETCGIRMHLPCVAKYFQSN-AEPRCPHCNDYWPHEIPK 68 (74)
T ss_dssp SSEECSSSCCEECHHHHHHHSTTC-SSCCCTTTCSCCCSCCCC
T ss_pred cCCccCCCCchhhHHHHHHHHHhc-CCCCCCCCcCcCCCCCCC
Confidence 357899999999988888777532 236899999999765543
No 328
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=48.02 E-value=4.4 Score=36.51 Aligned_cols=36 Identities=17% Similarity=0.284 Sum_probs=17.1
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAES 56 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~ 56 (330)
...|..|++.|...+. +.. ...-.|+.||+.|..+.
T Consensus 113 ~~~C~~C~~~~~~~~~---~~~-~~~p~c~~Cgg~lrP~v 148 (235)
T 1s5p_A 113 KVRCSQSGQVLDWTGD---VTP-EDKCHCCQFPAPLRPHV 148 (235)
T ss_dssp EEEETTTCCEEECCSC---CCS-SCCC-------CEEEEE
T ss_pred EEEeCCCCCcccchhh---ccC-CCCCCCCCCCCeecCcE
Confidence 4679999999875331 111 11347888999886543
No 329
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=47.70 E-value=8.9 Score=22.91 Aligned_cols=19 Identities=26% Similarity=0.831 Sum_probs=13.6
Q ss_pred CeeecC--CCCccccHHHHHh
Q 020131 16 QEYICP--NCQRRYNALDALR 34 (330)
Q Consensus 16 ~~Y~CP--~C~~~YT~lDA~~ 34 (330)
..|.|+ .|++.|+....+.
T Consensus 5 k~~~C~~~~C~k~f~~~~~L~ 25 (38)
T 1bhi_A 5 KPFLCTAPGCGQRFTNEDHLA 25 (38)
T ss_dssp CCEECCCTTTCCEESSHHHHH
T ss_pred cceECCCCCCCcccCCHHHHH
Confidence 468898 5999888655543
No 330
>3u5c_b RP61, YS20, 40S ribosomal protein S27-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_X 3u5g_b
Probab=47.36 E-value=6.6 Score=30.59 Aligned_cols=30 Identities=27% Similarity=0.634 Sum_probs=25.2
Q ss_pred ecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 19 ICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 19 ~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
+||.|+..=+ .||.....-.|..||+.|..
T Consensus 36 kCp~C~~~q~------VFSha~t~V~C~~Cg~~L~~ 65 (82)
T 3u5c_b 36 KCPGCLNITT------VFSHAQTAVTCESCSTILCT 65 (82)
T ss_dssp ECTTSCSCEE------EESBCSSCCCCSSSCCCCEE
T ss_pred ECCCCCCeeE------EEecCCeEEEccccCCEEec
Confidence 6999998765 46777778999999999965
No 331
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=47.14 E-value=3.8 Score=43.51 Aligned_cols=38 Identities=26% Similarity=0.620 Sum_probs=27.8
Q ss_pred eeecCCCCccccHHHHH--------------------hhcCCCCCCee-----ccCCCccccc
Q 020131 17 EYICPNCQRRYNALDAL--------------------RLVSLEDDSFH-----CENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~--------------------~Lld~~~~~F~-----C~~Cg~eL~~ 54 (330)
|--|.+||-|||....+ ++-||.+-.|+ |+.||-.|..
T Consensus 133 F~nCt~CGPR~tii~~lPYDR~~TsM~~F~mC~~C~~EY~dp~~RRfhAqp~aC~~CGP~l~l 195 (761)
T 3vth_A 133 FINCTNCGPRFSIIEDIPYDRAKTSMKVFPMCEKCSREYHDPHDRRFHAQPVACFDCGPSLSF 195 (761)
T ss_dssp TCCBTTBBCSGGGBCSSSCCGGGBGGGGSCCCHHHHHHHTCTTSTTTTCTTCCCTTTSCCEEE
T ss_pred cccCCCCCcchhhhccCCCCCCCCccccCCCCHHHHHHhcCcccccccCCCCcCCccCCeeEE
Confidence 44699999999987643 35566555665 9999998854
No 332
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=46.76 E-value=3.6 Score=34.52 Aligned_cols=35 Identities=17% Similarity=0.304 Sum_probs=22.1
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
.-+||.|+.-.-..+.... ....|.|..|+.....
T Consensus 24 ~~FCPeCgNmL~pked~~~---~~l~~~CrtCgY~~~~ 58 (133)
T 3qt1_I 24 FRFCRDCNNMLYPREDKEN---NRLLFECRTCSYVEEA 58 (133)
T ss_dssp CCBCTTTCCBCBCCBCTTT---CCBCCBCSSSCCBCCC
T ss_pred CeeCCCCCCEeeECccCCC---ceeEEECCCCCCcEEc
Confidence 4679999987644321100 0126999999987643
No 333
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=46.75 E-value=12 Score=27.06 Aligned_cols=30 Identities=10% Similarity=0.234 Sum_probs=19.2
Q ss_pred CCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 23 CQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 23 C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
||..|-..=+...+. .+.+.||.|+.++..
T Consensus 26 CgH~fc~~Ci~~~~~--~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 26 TGQTYERSSIQKWLD--AGHKTCPKSQETLLH 55 (78)
T ss_dssp TTEEEEHHHHHHHHT--TTCCBCTTTCCBCSS
T ss_pred CCCeecHHHHHHHHH--HCcCCCCCCcCCCCh
Confidence 455555444444443 247899999999854
No 334
>3iz6_X 40S ribosomal protein S27 (S27E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=46.13 E-value=7.3 Score=30.58 Aligned_cols=32 Identities=19% Similarity=0.399 Sum_probs=25.9
Q ss_pred eecCCCCccccHHHHHhhcCCCCCCeeccCCCcccccc
Q 020131 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAE 55 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~ 55 (330)
-+||.|++.=+ .|+.....-.|..||+.|..-
T Consensus 37 VkCp~C~~~~~------VFShA~t~V~C~~CgtvL~~P 68 (86)
T 3iz6_X 37 VKCQGCFNITT------VFSHSQTVVVCPGCQTVLCQP 68 (86)
T ss_dssp EECTTTCCEEE------EETTCSSCCCCSSSCCCCSCC
T ss_pred EECCCCCCeeE------EEecCCcEEEccCCCCEeecC
Confidence 37999998765 467777789999999999753
No 335
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=45.93 E-value=5.3 Score=35.46 Aligned_cols=39 Identities=8% Similarity=-0.093 Sum_probs=23.1
Q ss_pred CCCeeecCCC------------CccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 14 TVQEYICPNC------------QRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 14 ~~~~Y~CP~C------------~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
....|.||.| |.+|--.=+...+.. +...||.|+.+|..
T Consensus 205 ~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~--~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 205 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQR--VGHFNPVTRSPLTQ 255 (281)
T ss_dssp CCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHH--TCSSCTTTCCCCCG
T ss_pred CCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHH--CCCCCcCCCCCCch
Confidence 3468999875 445543333333321 23449999999954
No 336
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=45.48 E-value=4.1 Score=43.24 Aligned_cols=39 Identities=21% Similarity=0.522 Sum_probs=27.6
Q ss_pred eeecCCCCccccHHHHHh--------------------hcCCCCCCee-----ccCCCcccccc
Q 020131 17 EYICPNCQRRYNALDALR--------------------LVSLEDDSFH-----CENCNGELVAE 55 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~--------------------Lld~~~~~F~-----C~~Cg~eL~~~ 55 (330)
|=-|.+||-|||...++= +-||.+-.|+ |+.||-.|...
T Consensus 128 F~nCt~CGPR~tii~~lPYDR~~TsM~~F~mC~~C~~EY~dp~dRRfhAqp~aC~~CGP~l~l~ 191 (772)
T 4g9i_A 128 FIVCTNCGPRFTIIEDLPYDRENTTMKEFPMCDFCRSEYEDPLNRRYHAEPTACPVCGPSYRLY 191 (772)
T ss_dssp TCCCTTSSCCGGGCCSSSCCGGGSGGGGSCCCHHHHHHHHCSSSTTTTCTTCCCTTTSCCEEEE
T ss_pred cccCCCCCchhhhhhcCCCCCCCCcCCCCCCChhHHHHhCCCCCCCCcCCCCCCccCCceEEEE
Confidence 345999999999876542 3455555564 99999888543
No 337
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=45.19 E-value=13 Score=28.20 Aligned_cols=21 Identities=14% Similarity=0.638 Sum_probs=16.1
Q ss_pred CCCeeecCCCCccccHHHHHh
Q 020131 14 TVQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~ 34 (330)
....|.|+.|++.|+....+.
T Consensus 59 ~~k~~~C~~Cgk~F~~~~~L~ 79 (96)
T 2ctd_A 59 KQEMFTCHHCGKQLRSLAGMK 79 (96)
T ss_dssp CCCCCCCSSSCCCCSSHHHHH
T ss_pred CCCCeECCCCCCeeCCHHHHH
Confidence 445799999999998655543
No 338
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=44.98 E-value=3.8 Score=37.80 Aligned_cols=33 Identities=18% Similarity=0.574 Sum_probs=20.4
Q ss_pred CCeeecCCCCccccHHHHH-hhcCCCCCCeeccCCCcc
Q 020131 15 VQEYICPNCQRRYNALDAL-RLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~-~Lld~~~~~F~C~~Cg~e 51 (330)
...|.|+.|+..... +.. .-+ +....|+.|+..
T Consensus 132 ~~~f~C~~C~~~~~v-~~~~~~~---~~P~~Cp~C~~~ 165 (279)
T 1ltl_A 132 KAVFECRGCMRHHAV-TQSTNMI---TEPSLCSECGGR 165 (279)
T ss_dssp EEEEEETTTCCEEEE-ECSSSSC---CCCSCCTTTCCC
T ss_pred EEEEEcCCCCCEEEE-EecCCcc---cCCCcCCCCCCC
Confidence 457999999976432 111 011 123589999975
No 339
>2au3_A DNA primase; zinc ribbon, toprim, RNA polymerase, DNA replication, transf; HET: DNA; 2.00A {Aquifex aeolicus}
Probab=44.81 E-value=6 Score=38.37 Aligned_cols=28 Identities=25% Similarity=0.382 Sum_probs=20.5
Q ss_pred eecCCCCcc-ccHHHHHhhcCCCCCCeeccCCCc
Q 020131 18 YICPNCQRR-YNALDALRLVSLEDDSFHCENCNG 50 (330)
Q Consensus 18 Y~CP~C~~~-YT~lDA~~Lld~~~~~F~C~~Cg~ 50 (330)
+.||.|+-+ -|+ .+++..+.|+|-.||.
T Consensus 35 ~~CPfh~ektpSf-----~V~~~k~~~~CFgCg~ 63 (407)
T 2au3_A 35 TNCPFHPDDTPSF-----YVSPSKQIFKCFGCGV 63 (407)
T ss_dssp ECCSSSCCSSCCE-----EEETTTTEEEETTTCC
T ss_pred eeCcCCCCCCCeE-----EEECCCCEEEECCCCC
Confidence 469999843 233 4677788899999983
No 340
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=44.77 E-value=7.9 Score=31.82 Aligned_cols=32 Identities=22% Similarity=0.549 Sum_probs=24.0
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccch
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
.-.|..|++.|+++ .-..+|..||..+-...+
T Consensus 69 ~~~C~~C~~~Fs~~---------~RrHHCR~CG~vfC~~Cs 100 (125)
T 1joc_A 69 VQNCMACGKGFSVT---------VRRHHCRQCGNIFCAECS 100 (125)
T ss_dssp CCBCTTTCCBCCSS---------SCCEECTTTCCEECGGGS
T ss_pred CCCCcCcCCccccc---------cccccCCCCCeEEChHHh
Confidence 34699999999852 236899999988765544
No 341
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.41 E-value=10 Score=24.35 Aligned_cols=19 Identities=21% Similarity=0.273 Sum_probs=14.2
Q ss_pred CCeeecCC--CCccccHHHHH
Q 020131 15 VQEYICPN--CQRRYNALDAL 33 (330)
Q Consensus 15 ~~~Y~CP~--C~~~YT~lDA~ 33 (330)
...|.|+. |++.|+....+
T Consensus 7 ekp~~C~~~~C~k~F~~~~~L 27 (38)
T 2eln_A 7 GILLKCPTDGCDYSTPDKYKL 27 (38)
T ss_dssp CCCEECSSSSCCCEESCHHHH
T ss_pred CCCCCCCCCCCCCccCCHHHH
Confidence 45699985 99999865544
No 342
>3e20_C Eukaryotic peptide chain release factor subunit 1; SUP35, SUP45, translation termination, peptide release, GTP- nucleotide-binding; 3.50A {Schizosaccharomyces pombe}
Probab=44.10 E-value=4.3 Score=40.28 Aligned_cols=31 Identities=10% Similarity=0.117 Sum_probs=1.6
Q ss_pred eeecCCCCccccHHHHHhhcCCC-------CCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLE-------DDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~-------~~~F~C~~Cg~eL~ 53 (330)
.|.||.|..+. -.+.|. ...|.||.||.+|+
T Consensus 337 ~~r~~~~~~~~------~~~~~~~~~~~~~~~~~~c~~~g~~~~ 374 (441)
T 3e20_C 337 EFKNSEGNPVI------TYMTKEQEEKDSTNSFLLDKDTGAEME 374 (441)
T ss_dssp ----------C------CEECSCTTTCCC---------------
T ss_pred EEECCCCceEE------EecCccccccccccccccCcccCccce
Confidence 47899995322 122222 34699999999985
No 343
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=43.59 E-value=7.2 Score=30.60 Aligned_cols=11 Identities=27% Similarity=1.041 Sum_probs=9.8
Q ss_pred eeecCCCCccc
Q 020131 17 EYICPNCQRRY 27 (330)
Q Consensus 17 ~Y~CP~C~~~Y 27 (330)
.|+||.||-.|
T Consensus 51 ~FkCP~CgEEF 61 (95)
T 2k5c_A 51 VFKCPVCGEEF 61 (95)
T ss_dssp EEECTTTCCEE
T ss_pred hhcCCCccHHH
Confidence 59999999877
No 344
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA; 1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Probab=43.58 E-value=7 Score=30.77 Aligned_cols=29 Identities=31% Similarity=0.532 Sum_probs=20.6
Q ss_pred eeecCCCCccc-cHHHHHhhcCCCCCCeeccCCCc
Q 020131 17 EYICPNCQRRY-NALDALRLVSLEDDSFHCENCNG 50 (330)
Q Consensus 17 ~Y~CP~C~~~Y-T~lDA~~Lld~~~~~F~C~~Cg~ 50 (330)
.+.||.|+-+= |+ .+++..+.|+|-.||.
T Consensus 37 ~~~CPfh~e~~pSf-----~V~~~k~~~~Cf~cg~ 66 (103)
T 1d0q_A 37 FGLCPFHGEKTPSF-----SVSPEKQIFHCFGCGA 66 (103)
T ss_dssp EECCSSSCCSSCCE-----EEETTTTEEEETTTCC
T ss_pred EEECCCCCCCCCcE-----EEEcCCCEEEECCCCC
Confidence 36799997532 22 3566778899999993
No 345
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=43.34 E-value=7.4 Score=30.26 Aligned_cols=34 Identities=21% Similarity=0.468 Sum_probs=22.1
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
+|-|| ||.+|...+..-. +- .....|+.|.-.+.
T Consensus 23 ~ypCr-CGd~F~it~edL~-~g-e~iv~C~sCSL~I~ 56 (83)
T 1yop_A 23 TYPCP-CGDRFQIYLDDMF-EG-EKVAVCPSCSLMID 56 (83)
T ss_dssp EEEET-TTEEEEEEHHHHH-TT-CCEEECSSSCCEEE
T ss_pred EEeCC-CCCeEEECHHHHh-CC-CEEEECCCCccEEE
Confidence 68898 9999984332221 11 12589999996653
No 346
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=43.22 E-value=9.6 Score=28.22 Aligned_cols=29 Identities=28% Similarity=0.849 Sum_probs=22.3
Q ss_pred ecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccc
Q 020131 19 ICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAES 56 (330)
Q Consensus 19 ~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~ 56 (330)
.|..|++.|+++ .-..+|..||..+=..-
T Consensus 13 ~C~~C~~~F~~~---------~RrHHCR~CG~v~C~~C 41 (73)
T 1vfy_A 13 ACMICSKKFSLL---------NRKHHCRSCGGVFCQEH 41 (73)
T ss_dssp BCTTTCCBCBTT---------BCCEECTTTCCEECGGG
T ss_pred cccCCCCccCCc---------cccccCCCCCEEEcccc
Confidence 699999999953 23689999998775443
No 347
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=42.82 E-value=6.7 Score=34.40 Aligned_cols=25 Identities=24% Similarity=0.724 Sum_probs=18.1
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNG 50 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~ 50 (330)
.|.||.|+...+. ....++|++|+.
T Consensus 2 ~~~Cp~C~~~~~~---------~~~~~~C~~~~~ 26 (269)
T 1p91_A 2 SFSCPLCHQPLSR---------EKNSYICPQRHQ 26 (269)
T ss_dssp CBBCTTTCCBCEE---------ETTEEECTTCCE
T ss_pred cccCCCCCcccee---------CCCEEECCCCCc
Confidence 3789999987644 123689999963
No 348
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=42.79 E-value=5.3 Score=28.00 Aligned_cols=30 Identities=17% Similarity=0.596 Sum_probs=20.6
Q ss_pred eeecCCCCccc---------cHHHHHhhcCCCCCCeeccCCCccc
Q 020131 17 EYICPNCQRRY---------NALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 17 ~Y~CP~C~~~Y---------T~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
...||.|+..= +..|-+-+ -|.|..||..+
T Consensus 9 ~~~Cp~Cg~~~a~f~q~Q~RsaDE~mT~------Fy~C~~Cg~~w 47 (50)
T 1tfi_A 9 LFTCGKCKKKNCTYTQVQTRSADEPMTT------FVVCNECGNRW 47 (50)
T ss_dssp CSCCSSSCSSCEEEEEECSSSSSSCCEE------EEEESSSCCEE
T ss_pred ccCCCCCCCCEEEEEEecCcCCCCCceE------EEEcCCCCCeE
Confidence 46788887642 36666666 58888888765
No 349
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=42.10 E-value=10 Score=33.60 Aligned_cols=31 Identities=19% Similarity=0.670 Sum_probs=23.5
Q ss_pred eecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccch
Q 020131 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
-.|+.|++.|+++ .-..+|..||..+-...+
T Consensus 162 ~~C~~C~~~F~~~---------~rrhhCr~CG~v~C~~Cs 192 (220)
T 1dvp_A 162 RVCHRCRVEFTFT---------NRKHHCRNCGQVFCGQCT 192 (220)
T ss_dssp SBCTTTCCBCCSS---------SCCEECTTTCCEECSTTS
T ss_pred CccCCCCCccCCc---------ccccccCCcCCEEChHHh
Confidence 4799999999851 236899999987755544
No 350
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=41.89 E-value=9 Score=29.67 Aligned_cols=25 Identities=16% Similarity=0.403 Sum_probs=17.8
Q ss_pred ccHHHHHhhcCCCCCCeeccCCCccccccc
Q 020131 27 YNALDALRLVSLEDDSFHCENCNGELVAES 56 (330)
Q Consensus 27 YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~ 56 (330)
+..+++.+. ..|.||+||..++...
T Consensus 17 vk~ie~~q~-----~~y~Cp~CG~~~v~r~ 41 (83)
T 1vq8_Z 17 VAEIESEMN-----EDHACPNCGEDRVDRQ 41 (83)
T ss_dssp HHHHHHHHH-----SCEECSSSCCEEEEEE
T ss_pred HHHHHHhcc-----ccCcCCCCCCcceecc
Confidence 344555555 3799999999887654
No 351
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.83 E-value=7.2 Score=29.24 Aligned_cols=20 Identities=15% Similarity=0.632 Sum_probs=16.2
Q ss_pred CeeecCCCCccccHHHHHhh
Q 020131 16 QEYICPNCQRRYNALDALRL 35 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~L 35 (330)
..|.|+.|++.|.....+..
T Consensus 53 ~~~~C~~C~k~F~~~~~L~~ 72 (98)
T 2gqj_A 53 DALKCQHCRKQFKSKAGLNY 72 (98)
T ss_dssp HHHSCSSSCCCCSCHHHHHH
T ss_pred CCEECCCCCCccCCHHHHHH
Confidence 46999999999997766653
No 352
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=41.81 E-value=16 Score=30.48 Aligned_cols=38 Identities=18% Similarity=0.289 Sum_probs=21.4
Q ss_pred CCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 15 VQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
.....|.+|++.|.++..-..+=..=..+.|..|+..+
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~ 90 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVET 90 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEEC
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCCcc
Confidence 35678999999998744322111111245555555544
No 353
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=41.62 E-value=10 Score=24.34 Aligned_cols=15 Identities=13% Similarity=0.662 Sum_probs=11.1
Q ss_pred CCeeecC--CCCccccH
Q 020131 15 VQEYICP--NCQRRYNA 29 (330)
Q Consensus 15 ~~~Y~CP--~C~~~YT~ 29 (330)
...|.|+ .|++.|+.
T Consensus 16 ~k~~~C~~~~C~k~F~~ 32 (47)
T 1ncs_A 16 DKTFECLFPGCTKTFKR 32 (47)
T ss_dssp TTEEECCCTTCCCEECS
T ss_pred CCCeECCCCCCCCccCC
Confidence 3568894 79988875
No 354
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=41.50 E-value=12 Score=22.36 Aligned_cols=19 Identities=26% Similarity=0.623 Sum_probs=13.3
Q ss_pred CCeeecC--CCCccccHHHHH
Q 020131 15 VQEYICP--NCQRRYNALDAL 33 (330)
Q Consensus 15 ~~~Y~CP--~C~~~YT~lDA~ 33 (330)
...|.|+ .|++.|+....+
T Consensus 6 ~k~~~C~~~~C~k~f~~~~~L 26 (37)
T 1va1_A 6 KKQHICHIQGCGKVYGKTSHL 26 (37)
T ss_dssp CCCEECCSTTCCCEESCHHHH
T ss_pred CCCCCCCCCCCCCccCCHHHH
Confidence 3468997 599998765443
No 355
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=40.69 E-value=13 Score=33.03 Aligned_cols=30 Identities=23% Similarity=0.524 Sum_probs=20.2
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
..-.|++|+..+.. + ....|.|+.|+....
T Consensus 9 ~~~~Cw~C~~~~~~------~--~~~~~fC~~c~~~q~ 38 (207)
T 3bvo_A 9 NYPRCWNCGGPWGP------G--REDRFFCPQCRALQA 38 (207)
T ss_dssp --CBCSSSCCBCCS------S--CSCCCBCTTTCCBCC
T ss_pred CCCCCCCCCCCccc------c--cccccccccccccCC
Confidence 35679999987641 1 234799999997553
No 356
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=40.46 E-value=4.3 Score=32.84 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=21.8
Q ss_pred eecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
..||.||.-....+... .....|.|..|+..-..
T Consensus 5 ~FCp~Cgn~L~~~~~~~---~~~~~~~C~~C~y~~~~ 38 (113)
T 3h0g_I 5 QYCIECNNMLYPREDKV---DRVLRLACRNCDYSEIA 38 (113)
T ss_dssp CCCSSSCCCCEECCCTT---TCCCCEECSSSCCEECC
T ss_pred eeCcCCCCEeeEcccCC---CCeeEEECCCCCCeEEc
Confidence 46999998765432110 01236999999987643
No 357
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=40.32 E-value=9.8 Score=35.82 Aligned_cols=32 Identities=16% Similarity=0.277 Sum_probs=22.2
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
-..+||.|+...-.-|...+ ..+|+.|++...
T Consensus 23 l~~kc~~~~~~~~~~~l~~~------~~v~~~~~~~~r 54 (304)
T 2f9y_B 23 VWTKCDSCGQVLYRAELERN------LEVCPKCDHHMR 54 (304)
T ss_dssp CEECCTTTCCCEETTHHHHT------TTBCTTTCCBCC
T ss_pred HHHhhhhccchhhHHHHHHH------hCCCCCCCCCCC
Confidence 35789999886554443333 579999998764
No 358
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=39.94 E-value=22 Score=26.33 Aligned_cols=30 Identities=20% Similarity=0.349 Sum_probs=17.2
Q ss_pred CCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 23 CQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 23 C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
||..|-..=+..++.. .+.+.||.|+.++.
T Consensus 32 CgH~fC~~Ci~~~~~~-~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 32 CGNSYCDECIRTALLE-SDEHTCPTCHQNDV 61 (92)
T ss_dssp TCCEECHHHHHHHHHH-CTTCCCTTTCCSSC
T ss_pred CCCHHHHHHHHHHHHh-cCCCcCcCCCCcCC
Confidence 5555543333333221 23589999999974
No 359
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=39.52 E-value=15 Score=27.93 Aligned_cols=33 Identities=21% Similarity=0.518 Sum_probs=24.5
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccch
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
..-.|..|++.|+++ .-..+|..||..+=...+
T Consensus 20 ~~~~C~~C~~~Fs~~---------~RrHHCR~CG~v~C~~Cs 52 (84)
T 1z2q_A 20 DAPACNGCGCVFTTT---------VRRHHCRNCGYVLCGDCS 52 (84)
T ss_dssp TCCBCTTTCCBCCTT---------SCCEECTTTCCEECTGGG
T ss_pred CCCCCcCcCCccccc---------hhcccccCCCcEEChHHh
Confidence 345799999999863 236899999987755443
No 360
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=38.86 E-value=11 Score=33.88 Aligned_cols=30 Identities=17% Similarity=0.652 Sum_probs=23.3
Q ss_pred ecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccch
Q 020131 19 ICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 19 ~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
.|..|++.|+++ .-..+|..||..+-...+
T Consensus 166 ~C~~C~~~F~~~---------~RrhHCR~CG~v~C~~Cs 195 (226)
T 3zyq_A 166 ECHRCRVQFGVM---------TRKHHCRACGQIFCGKCS 195 (226)
T ss_dssp BCTTTCCBCBTT---------BCCEECTTTCCEECTTTC
T ss_pred CCcCcCCCCCcc---------ccccccCCCcCEeChhhc
Confidence 799999999852 136899999988765554
No 361
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=38.68 E-value=8.6 Score=28.56 Aligned_cols=38 Identities=21% Similarity=0.556 Sum_probs=24.7
Q ss_pred eeecCCCCccccHHHHHhhcC--CCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALDALRLVS--LEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld--~~~~~F~C~~Cg~eL~~ 54 (330)
.-+|+.|++.....+.+..++ .-..=|+|..|+..|..
T Consensus 15 ~~~C~~C~~~I~~~e~v~a~~~~wH~~CF~C~~C~~~L~~ 54 (82)
T 2co8_A 15 GDLCALCGEHLYVLERLCVNGHFFHRSCFRCHTCEATLWP 54 (82)
T ss_dssp SCBCSSSCCBCCTTTBCCBTTBCCBTTTCBCSSSCCBCCT
T ss_pred CCCCcccCCCcccceEEEECCCeeCCCcCEEcCCCCCcCC
Confidence 457999999876443332221 12245999999999854
No 362
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=38.54 E-value=13 Score=28.06 Aligned_cols=35 Identities=14% Similarity=0.319 Sum_probs=20.0
Q ss_pred CCeeecCCCCccccHHHHHhh-cC-C-CCCCeeccCCC
Q 020131 15 VQEYICPNCQRRYNALDALRL-VS-L-EDDSFHCENCN 49 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L-ld-~-~~~~F~C~~Cg 49 (330)
...|.|+.|++.|+....+.. +- . ..-.|.|..|.
T Consensus 23 ~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~ 60 (88)
T 1x6f_A 23 NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE 60 (88)
T ss_dssp CSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh
Confidence 356888888888876544432 00 0 01136777665
No 363
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=38.46 E-value=4.7 Score=33.02 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=22.7
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
...||.||.-....+.. ......|.|..||..-..
T Consensus 4 ~~FCp~CgnlL~~~~~~---~~~~~~~~C~~C~y~~~~ 38 (122)
T 1twf_I 4 FRFCRDCNNMLYPREDK---ENNRLLFECRTCSYVEEA 38 (122)
T ss_dssp CCBCSSSCCBCEEEEET---TTTEEEEECSSSSCEEEC
T ss_pred CCcccccCccCcccccC---cCCCCEEECCcCCCeeec
Confidence 45799999876543210 012247999999987643
No 364
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=38.17 E-value=8.5 Score=32.16 Aligned_cols=32 Identities=16% Similarity=0.400 Sum_probs=20.7
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
.|.|| ||..|...+..-. . .....|+.|.-.+
T Consensus 112 ~~~Cr-CG~~f~i~~~~l~-~--~~~v~C~sCSl~~ 143 (155)
T 2l6l_A 112 YLSCR-CGGKYSVSKDEAE-E--VSLISCDTCSLII 143 (155)
T ss_dssp EEECS-SSCEEEEETTHHH-H--CCEEECSSSSCEE
T ss_pred EEcCC-CCCeEEecHHHhC-C--CCEEECCCCceEE
Confidence 58898 9999984322211 0 0258999998655
No 365
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.76 E-value=26 Score=24.61 Aligned_cols=39 Identities=21% Similarity=0.381 Sum_probs=24.1
Q ss_pred CeeecCCCCcccc------------HHHHHhhcCCCCCCeeccCCCccccc
Q 020131 16 QEYICPNCQRRYN------------ALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 16 ~~Y~CP~C~~~YT------------~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
..+.||.|...|. ..=+..++......+.||.|+.++..
T Consensus 19 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 19 EEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred cCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 4577777655544 33344444422357899999998854
No 366
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=36.70 E-value=12 Score=36.41 Aligned_cols=31 Identities=26% Similarity=0.415 Sum_probs=19.9
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
.|.|+.|+....... + .+ -.-.|+.||..+.
T Consensus 244 v~~C~~C~~~~~~~~---~-~~--~~~~C~~cg~~~~ 274 (392)
T 3axs_A 244 IQYCFNCMNREVVTD---L-YK--FKEKCPHCGSKFH 274 (392)
T ss_dssp EEECTTTCCEEEECC---G-GG--CCSBCTTTCSBCE
T ss_pred EEECCCCCCeEeecC---C-CC--CCCcCCCCCCccc
Confidence 567999998755211 1 11 2468999997653
No 367
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=36.70 E-value=14 Score=29.08 Aligned_cols=34 Identities=21% Similarity=0.441 Sum_probs=21.8
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
+|-|| ||-+|...+..-. +- .....|+.|.-.+.
T Consensus 23 ~ypCr-CGd~F~IteedLe-~g-e~iv~C~sCSL~Ik 56 (89)
T 2jr7_A 23 FYPCP-CGDNFSITKEDLE-NG-EDVATCPSCSLIIK 56 (89)
T ss_dssp EEECT-TSSEEEEEHHHHH-HT-CCEEECTTTCCEEE
T ss_pred EEcCC-CCCEEEECHHHHh-CC-CEEEECCCCccEEE
Confidence 68898 9999984332211 11 12589999996653
No 368
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=36.65 E-value=6.2 Score=33.37 Aligned_cols=29 Identities=17% Similarity=0.450 Sum_probs=18.9
Q ss_pred eecCCCCccccHHHHHhhcCC-CCCCeeccCCCc
Q 020131 18 YICPNCQRRYNALDALRLVSL-EDDSFHCENCNG 50 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~-~~~~F~C~~Cg~ 50 (330)
=.||.||..... .+.+- ....+.|+.||.
T Consensus 4 ~~C~~CG~~~~~----~~~~G~~~~~~~~~~~~~ 33 (189)
T 3cng_A 4 KFCSQCGGEVIL----RIPEGDTLPRYICPKCHT 33 (189)
T ss_dssp CBCTTTCCBCEE----ECCTTCSSCEEEETTTTE
T ss_pred ccCchhCCcccc----ccccCCCCcceECCCCCC
Confidence 369999999874 11121 123589999993
No 369
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=36.58 E-value=14 Score=28.85 Aligned_cols=12 Identities=42% Similarity=0.971 Sum_probs=8.3
Q ss_pred CCCeeccCCCcc
Q 020131 40 DDSFHCENCNGE 51 (330)
Q Consensus 40 ~~~F~C~~Cg~e 51 (330)
...|.||+||++
T Consensus 21 ~t~F~CPfCnh~ 32 (85)
T 1wii_A 21 ETQFTCPFCNHE 32 (85)
T ss_dssp SSCCCCTTTCCS
T ss_pred CCeEcCCCCCCC
Confidence 346777777776
No 370
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=35.88 E-value=20 Score=27.64 Aligned_cols=32 Identities=22% Similarity=0.512 Sum_probs=23.9
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccch
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
.-.|..|++.|++ + .-..+|..||..+-....
T Consensus 20 ~~~C~~C~~~F~~------~---~RrhhCr~CG~v~C~~Cs 51 (90)
T 3t7l_A 20 APNCMNCQVKFTF------T---KRRHHCRACGKVFCGVCC 51 (90)
T ss_dssp CCBCTTTCCBCCS------S---SCCEECTTTCCEECGGGS
T ss_pred CCcCcCCCCcccc------h---hhCccccCCCCEECCccc
Confidence 4569999999984 1 236899999988765544
No 371
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=35.02 E-value=28 Score=30.08 Aligned_cols=48 Identities=23% Similarity=0.295 Sum_probs=35.5
Q ss_pred hhHHHHHHhhcCCCCeeecCCCCc------------------cccHHHHHhhcCCCCCCeeccCCC
Q 020131 2 RKKLKDELECKNTVQEYICPNCQR------------------RYNALDALRLVSLEDDSFHCENCN 49 (330)
Q Consensus 2 rk~Le~~l~~~~~~~~Y~CP~C~~------------------~YT~lDA~~Lld~~~~~F~C~~Cg 49 (330)
|.+|..+++...-...++|..||. ..-+++-+-.+|.+.....|..|+
T Consensus 21 r~~~~~~v~~~~~~~e~~Ct~CG~~~~~~~HPlf~v~lC~~Ck~~y~e~~f~~DeDG~~~yC~wC~ 86 (159)
T 3a1b_A 21 RERLVYEVRQKCRNIEDICISCGSLNVTLEHPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICC 86 (159)
T ss_dssp HHHHHHHHHTTSSCGGGSBTTTCCSCCCEECSSBSSEECHHHHHHHHHHTTCBCTTSSBSSCTTTS
T ss_pred HHhhhHHHHhccCCccCcccCCCCcCccccCCCccchhhHHHHHHHhhcccccCCCCCcceeeEec
Confidence 667778888877778999999998 444555555666666677788886
No 372
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=34.21 E-value=29 Score=23.70 Aligned_cols=30 Identities=27% Similarity=0.598 Sum_probs=19.7
Q ss_pred HHHHHhhcCCCCeeecC--CCCccccHHHHHh
Q 020131 5 LKDELECKNTVQEYICP--NCQRRYNALDALR 34 (330)
Q Consensus 5 Le~~l~~~~~~~~Y~CP--~C~~~YT~lDA~~ 34 (330)
|..-++.-.....|.|+ .|++.|.....+.
T Consensus 35 L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~ 66 (72)
T 2epa_A 35 LKAHTRTHTGEKPFSCSWKGCERRFARSDELS 66 (72)
T ss_dssp HHHHHHHHSSSCSEECCCTTCCCEESSHHHHH
T ss_pred HHHHHHhcCCCCCccCCCCCCCcccCCHHHHH
Confidence 33444444455679996 4999998766553
No 373
>4gop_C Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis}
Probab=33.99 E-value=12 Score=36.57 Aligned_cols=29 Identities=21% Similarity=0.689 Sum_probs=21.4
Q ss_pred CeeecCC--CCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 16 QEYICPN--CQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 16 ~~Y~CP~--C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
-+.-||. |+++-+. ..++.|.|+.|+...
T Consensus 307 ~Y~aC~~~~C~kkv~~--------~~~g~~~C~~C~~~~ 337 (444)
T 4gop_C 307 YYTACASEGCNKKVNL--------DHENNWRCEKCDRSY 337 (444)
T ss_dssp EEEECCSTTCCCBEEE--------CTTSCEEETTTTEEE
T ss_pred EEccCCcccCCCcccc--------CCCccEECCCCCCcC
Confidence 3567999 9998653 124679999999653
No 374
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=33.87 E-value=12 Score=40.99 Aligned_cols=34 Identities=29% Similarity=0.684 Sum_probs=24.9
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNG 50 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~ 50 (330)
..|.||.||..|..++. ++||+..-.=.||.|.+
T Consensus 266 ~~~~cp~~g~~~~~~~p-~~FSfN~p~GaCp~C~G 299 (972)
T 2r6f_A 266 EKHACPYCGFSIGELEP-RLFSFNSPFGACPDCDG 299 (972)
T ss_dssp SSEECTTTCCEEECCCG-GGGCSSSTTTBCTTTTS
T ss_pred ccccCCCCCCcCCCCCh-hhcCcCCCCCCCCCCcC
Confidence 45889999988875543 46676554568999984
No 375
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=33.54 E-value=20 Score=33.50 Aligned_cols=33 Identities=18% Similarity=0.369 Sum_probs=23.3
Q ss_pred CCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 15 VQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
.-..+||.|+...-.-+...+ ..+||.|+....
T Consensus 28 ~l~~kc~~~~~~~y~~~l~~~------~~v~p~~~~~~r 60 (285)
T 2f9i_B 28 GIMTKCPKCKKIMYTKELAEN------LNVCFNCDHHIA 60 (285)
T ss_dssp SSEEECTTTCCEEEHHHHHHT------TTBCTTTCCBCC
T ss_pred HHHHhhHhhCCccchhhhHHh------cCcCCCCCCCCC
Confidence 346799999987655444444 479999998653
No 376
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=33.42 E-value=27 Score=26.26 Aligned_cols=33 Identities=18% Similarity=0.612 Sum_probs=24.1
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccch
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
..-.|..|++.|++ + .-..+|..||..+=....
T Consensus 18 ~~~~C~~C~~~Fs~------~---~RrHHCR~CG~v~C~~Cs 50 (82)
T 2yw8_A 18 EATHCRQCEKEFSI------S---RRKHHCRNCGHIFCNTCS 50 (82)
T ss_dssp CCCBCTTTCCBCBT------T---BCCEECTTTCCEECSGGG
T ss_pred cCCcccCcCCcccC------c---cccccCCCCCCEEChHHh
Confidence 34579999999984 1 236899999988755443
No 377
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=32.79 E-value=7.3 Score=35.84 Aligned_cols=30 Identities=13% Similarity=0.374 Sum_probs=20.9
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
.-.||.||...... ...-...|+.||...-
T Consensus 107 ~~fC~~CG~~~~~~-------~~~~~~~C~~C~~~~y 136 (269)
T 1vk6_A 107 HKYCGYCGHEMYPS-------KTEWAMLCSHCRERYY 136 (269)
T ss_dssp TSBCTTTCCBEEEC-------SSSSCEEESSSSCEEC
T ss_pred CCccccCCCcCccC-------CCceeeeCCCCCCEec
Confidence 34699999887542 1233689999997653
No 378
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=32.34 E-value=15 Score=28.47 Aligned_cols=34 Identities=21% Similarity=0.429 Sum_probs=22.0
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
+|-|| ||-+|...+..-. +- .....|+-|.-.+.
T Consensus 30 ~y~Cr-CGd~F~it~edL~-~g-e~iv~C~sCSL~I~ 63 (83)
T 1wge_A 30 FYPCP-CGDNFAITKEDLE-NG-EDVATCPSCSLIIK 63 (83)
T ss_dssp EECCS-SSSCEEEEHHHHH-TT-CCEEECTTTCCEEE
T ss_pred EEeCC-CCCEEEECHHHHh-CC-CEEEECCCCceEEE
Confidence 57898 9999984333221 11 12589999997653
No 379
>2zkr_2 60S ribosomal protein L37E; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} SCOP: i.1.1.1
Probab=32.01 E-value=25 Score=28.09 Aligned_cols=28 Identities=14% Similarity=0.443 Sum_probs=21.0
Q ss_pred CCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcc
Q 020131 14 TVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~e 51 (330)
+...-.||+||...= .+ ....|-.||.+
T Consensus 13 ~KtH~lCrRCG~~sf------H~----qK~~CgkCGYp 40 (97)
T 2zkr_2 13 NKTHTLCRRCGSKAY------HL----QKSTCGKCGYP 40 (97)
T ss_dssp CCCEECCTTTCSSCE------ET----TSCCBTTTCTT
T ss_pred CCCCCcCCCCCCccC------cC----ccccCcccCCc
Confidence 456789999999732 22 36899999975
No 380
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=31.73 E-value=16 Score=28.19 Aligned_cols=33 Identities=18% Similarity=0.554 Sum_probs=24.6
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccch
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
..-.|..|++.|+++ .-..+|..||..+-....
T Consensus 8 ~~~~C~~C~~~F~~~---------~RrHHCR~CG~vfC~~Cs 40 (88)
T 1wfk_A 8 MESRCYGCAVKFTLF---------KKEYGCKNCGRAFCNGCL 40 (88)
T ss_dssp CCSBCTTTCCBCCSS---------SCEEECSSSCCEEETTTS
T ss_pred cCCCCcCcCCcccCc---------cccccCCCCCCEEChhHc
Confidence 345799999999963 236899999988765544
No 381
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.72 E-value=19 Score=27.23 Aligned_cols=32 Identities=19% Similarity=0.502 Sum_probs=23.7
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccch
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
.-.|..|++.|+++ .-..+|..||..+=....
T Consensus 14 ~~~C~~C~~~F~~~---------~RrHHCR~CG~vfC~~Cs 45 (84)
T 1x4u_A 14 FGNCTGCSATFSVL---------KKRRSCSNCGNSFCSRCC 45 (84)
T ss_dssp CSSCSSSCCCCCSS---------SCCEECSSSCCEECTTTS
T ss_pred CCcCcCcCCccccc---------hhhhhhcCCCcEEChhhc
Confidence 45799999999863 236899999987755443
No 382
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=31.31 E-value=13 Score=31.00 Aligned_cols=13 Identities=23% Similarity=0.473 Sum_probs=10.7
Q ss_pred eeecCCCCccccH
Q 020131 17 EYICPNCQRRYNA 29 (330)
Q Consensus 17 ~Y~CP~C~~~YT~ 29 (330)
..+||.||+.|-.
T Consensus 99 ~L~Cp~cgr~ypI 111 (125)
T 3q87_A 99 SLRCDMCGLIYPI 111 (125)
T ss_dssp EEEETTTCCEEEE
T ss_pred EEECCCCCCEeec
Confidence 4689999999954
No 383
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=29.91 E-value=12 Score=35.59 Aligned_cols=11 Identities=36% Similarity=0.791 Sum_probs=6.1
Q ss_pred eeccCCCcccc
Q 020131 43 FHCENCNGELV 53 (330)
Q Consensus 43 F~C~~Cg~eL~ 53 (330)
..|..|++=|.
T Consensus 254 e~C~~C~~YlK 264 (309)
T 2fiy_A 254 ETCPSCQGYLK 264 (309)
T ss_dssp EEETTTTEEEE
T ss_pred EEcccccchHh
Confidence 45666665553
No 384
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=29.70 E-value=16 Score=30.65 Aligned_cols=28 Identities=21% Similarity=0.503 Sum_probs=20.6
Q ss_pred CCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 15 VQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
-..-+|+.||+.|-. | .-.|+.|++.-.
T Consensus 45 L~~~rC~~CG~~~~P--------P---r~~Cp~C~s~~~ 72 (145)
T 3irb_A 45 IIGSKCSKCGRIFVP--------A---RSYCEHCFVKIE 72 (145)
T ss_dssp CEEEECTTTCCEEES--------C---CSEETTTTEECC
T ss_pred EEEEEeCCCCcEEcC--------c---hhhCcCCCCCce
Confidence 346789999998743 2 457999998643
No 385
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.47 E-value=20 Score=26.28 Aligned_cols=38 Identities=34% Similarity=0.711 Sum_probs=25.1
Q ss_pred CeeecCCCCccccHHHHHhhcCC--CCCCeeccCCCccccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSL--EDDSFHCENCNGELVA 54 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~--~~~~F~C~~Cg~eL~~ 54 (330)
...+|+.|+.... .+++..++- -..=|.|..|+.+|..
T Consensus 14 ~~~~C~~C~~~I~-~~~v~a~~~~~H~~CF~C~~C~~~L~~ 53 (79)
T 2cor_A 14 GKYICQKCHAIID-EQPLIFKNDPYHPDHFNCANCGKELTA 53 (79)
T ss_dssp CCCBCTTTCCBCC-SCCCCCSSSCCCTTTSBCSSSCCBCCT
T ss_pred CCCCCccCCCEec-ceEEEECcceeCCCCCEeCCCCCccCC
Confidence 3578999999777 233222221 2245999999999963
No 386
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=29.40 E-value=18 Score=27.83 Aligned_cols=20 Identities=20% Similarity=0.683 Sum_probs=16.0
Q ss_pred CCeeecCCCCccccHHHHHh
Q 020131 15 VQEYICPNCQRRYNALDALR 34 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~ 34 (330)
...|.|+.|++.|+....+.
T Consensus 98 ~~~~~C~~C~k~f~~~~~l~ 117 (129)
T 2wbt_A 98 EHTKVCPVCKKEFTSTDSAL 117 (129)
T ss_dssp CCCCBCTTTCCBCSSHHHHH
T ss_pred CCCCCCCCCCcccCCHHHHH
Confidence 45699999999998766554
No 387
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=29.33 E-value=21 Score=29.28 Aligned_cols=32 Identities=16% Similarity=0.473 Sum_probs=23.0
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccch
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
.-.|..|+..|+++ . -..+|..||..+-...+
T Consensus 19 ~~~C~~C~~~Fs~~---~------RkHHCR~CG~ifC~~Cs 50 (120)
T 1y02_A 19 EPSCKSCGAHFANT---A------RKQTCLDCKKNFCMTCS 50 (120)
T ss_dssp -CCCTTTCCCCSSG---G------GCEECTTTCCEECGGGE
T ss_pred cCcccCcCCccccc---c------ccccCCCCCCeeCHHHh
Confidence 45799999999863 1 26899999987655443
No 388
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=28.39 E-value=20 Score=27.46 Aligned_cols=38 Identities=18% Similarity=0.483 Sum_probs=22.5
Q ss_pred eeecCCCCcccc------------HHHHHhhcCCCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYN------------ALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT------------~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
.+.||.|...|. ..=+..++....+.+.||.|+.++..
T Consensus 21 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 21 ILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 466776655543 22233333323345899999999864
No 389
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=27.93 E-value=32 Score=28.52 Aligned_cols=14 Identities=29% Similarity=0.714 Sum_probs=11.4
Q ss_pred CCeeccCCCccccc
Q 020131 41 DSFHCENCNGELVA 54 (330)
Q Consensus 41 ~~F~C~~Cg~eL~~ 54 (330)
+.+.||.|+.++..
T Consensus 89 ~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 89 GNKECPTCRKKLVS 102 (165)
T ss_dssp TCCBCTTTCCBCCS
T ss_pred CcCCCCCCCCcCCC
Confidence 36789999999854
No 390
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.74 E-value=11 Score=27.86 Aligned_cols=37 Identities=19% Similarity=0.454 Sum_probs=24.5
Q ss_pred eeecCCCCccccHHHHHhhcC--CCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRLVS--LEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld--~~~~~F~C~~Cg~eL~ 53 (330)
.-+|+.|++.....+.+..++ ....=|.|..|+..|.
T Consensus 15 ~~~C~~C~~~I~~~~~v~a~~~~wH~~CF~C~~C~~~L~ 53 (80)
T 2dj7_A 15 PSHCAGCKEEIKHGQSLLALDKQWHVSCFKCQTCSVILT 53 (80)
T ss_dssp CSCCTTTCCCCSSSCCEEETTEEECTTTCBCSSSCCBCS
T ss_pred CCCCcCcCCeeCCCeEEEECCcccccccCCcCcCCCCcC
Confidence 468999999776433332222 1234699999999995
No 391
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=27.37 E-value=46 Score=25.02 Aligned_cols=30 Identities=20% Similarity=0.476 Sum_probs=18.4
Q ss_pred CCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 22 NCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 22 ~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
.||..|-..=+...+. ..+.||.|+..+..
T Consensus 40 ~CgH~fC~~Ci~~~~~---~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 40 QCSHNYCSLCIRKFLS---YKTQCPTCCVTVTE 69 (99)
T ss_dssp TTCCEEEHHHHHHHHT---TCCBCTTTCCBCCG
T ss_pred CCCCHhhHHHHHHHHH---CCCCCCCCCCcCCh
Confidence 4555554433334433 25799999999864
No 392
>2yww_A Aspartate carbamoyltransferase regulatory chain; ATP complex, structural genomics, NPPSFA; HET: ATP; 2.00A {Methanocaldococcus jannaschii}
Probab=27.16 E-value=8.6 Score=33.07 Aligned_cols=14 Identities=21% Similarity=0.342 Sum_probs=11.3
Q ss_pred CCeeccCCCccccc
Q 020131 41 DSFHCENCNGELVA 54 (330)
Q Consensus 41 ~~F~C~~Cg~eL~~ 54 (330)
..|+|.||+..+..
T Consensus 132 ~~lrC~YCe~~~~~ 145 (149)
T 2yww_A 132 LKIRCYYCEKFLNE 145 (149)
T ss_dssp EEEEETTTCCBCSS
T ss_pred CEEEeeCCCcChhh
Confidence 46999999998743
No 393
>2gnr_A Conserved hypothetical protein; 13815350, structural genomics, PSI, protein structure initiative; 1.80A {Sulfolobus solfataricus P2} PDB: 3irb_A
Probab=26.73 E-value=21 Score=30.00 Aligned_cols=26 Identities=23% Similarity=0.530 Sum_probs=19.8
Q ss_pred CCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCcc
Q 020131 15 VQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~e 51 (330)
-....|+.||+.|-. | .-.|+.|++.
T Consensus 45 L~~~rC~~CG~~~fP--------P---r~~Cp~C~s~ 70 (145)
T 2gnr_A 45 IIGSKCSKCGRIFVP--------A---RSYCEHCFVK 70 (145)
T ss_dssp CEEEECTTTCCEEES--------C---CSEETTTTEE
T ss_pred EEEEEECCCCcEEeC--------C---CCCCCCCCCC
Confidence 346789999998743 2 4579999986
No 394
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.42 E-value=12 Score=26.99 Aligned_cols=38 Identities=18% Similarity=0.510 Sum_probs=25.1
Q ss_pred eeecCCCCccccHHHHHhhcC--CCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALDALRLVS--LEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld--~~~~~F~C~~Cg~eL~~ 54 (330)
.-+|+.|++.....+.+..++ .-..=|.|..|+.+|..
T Consensus 9 ~~~C~~C~~~I~~~~~v~a~~~~~H~~CF~C~~C~~~L~~ 48 (76)
T 2cu8_A 9 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTP 48 (76)
T ss_dssp CCBCTTTCCBCCTTTEEEETTEEEETTTCBCSSSCCBCCT
T ss_pred CCCCcCCCCEeECCeEEEECCeEeeCCCCCCCCCCCccCC
Confidence 357999999877544332221 11235999999999963
No 395
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=26.27 E-value=15 Score=33.44 Aligned_cols=33 Identities=15% Similarity=0.473 Sum_probs=20.5
Q ss_pred CCeeec--CCCCccccHH---HHHhhcCCCCCCeeccCCCc
Q 020131 15 VQEYIC--PNCQRRYNAL---DALRLVSLEDDSFHCENCNG 50 (330)
Q Consensus 15 ~~~Y~C--P~C~~~YT~l---DA~~Lld~~~~~F~C~~Cg~ 50 (330)
...|.| +.|+..+... .-..-+ +....|+.|+.
T Consensus 139 ~~~f~C~~~~C~~~~~~~~~~~~~~~~---~~P~~Cp~C~~ 176 (268)
T 2vl6_A 139 KATYKHIHPDCMQEFEWPEDEEMPEVL---EMPTICPKCGK 176 (268)
T ss_dssp ECEEEEECTTCCCEEESSTTSCCCTTC---CCCSBCTTTCC
T ss_pred EEEEECCCCCCCCEEeeeecccCCCcc---cCCccCCCCCC
Confidence 457999 9999776432 101111 12467999997
No 396
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=25.91 E-value=15 Score=28.61 Aligned_cols=36 Identities=17% Similarity=0.444 Sum_probs=26.0
Q ss_pred eecCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
..||.|.+.++..+...++- ....+.|+.|...+..
T Consensus 49 ~~CP~Cr~~~~~~~l~~l~i-~~~~~~C~iC~~~~~~ 84 (133)
T 4ap4_A 49 NTCPTCRKKINHKRYHPIYI-GSGTVSCPICMDGYSE 84 (133)
T ss_dssp SBCTTTCCBCTTTCEEECBC-SSSSCBCTTTCCBHHH
T ss_pred CCCCCCCCcCcccccccccc-CCCCCCCCCCCCcccc
Confidence 48999999998766654432 2357899999888753
No 397
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=25.88 E-value=13 Score=26.00 Aligned_cols=37 Identities=19% Similarity=0.489 Sum_probs=23.5
Q ss_pred eeecCCCCccccHHHHHhhcCC--CCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSL--EDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~--~~~~F~C~~Cg~eL~~ 54 (330)
.-+|+.|+.... .+++..++- -..=|.|..|+.+|..
T Consensus 5 ~~~C~~C~~~I~-~~~~~a~~~~~H~~CF~C~~C~~~L~~ 43 (66)
T 1nyp_A 5 VPICGACRRPIE-GRVVNAMGKQWHVEHFVCAKCEKPFLG 43 (66)
T ss_dssp CCEETTTTEECC-SCEECCTTSBEETTTCBCTTTCCBCSS
T ss_pred CCCCcccCCEec-ceEEEECccccccCcCEECCCCCCCCC
Confidence 357999999876 332221110 1235899999999953
No 398
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=25.82 E-value=13 Score=38.84 Aligned_cols=36 Identities=25% Similarity=0.543 Sum_probs=24.9
Q ss_pred eeecCCCCccccHHHHHh--------------------hcCCCCCCe-----eccCCCccc
Q 020131 17 EYICPNCQRRYNALDALR--------------------LVSLEDDSF-----HCENCNGEL 52 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~--------------------Lld~~~~~F-----~C~~Cg~eL 52 (330)
|--|.+||-|||....+= +-||.+-.| -|+.||-.|
T Consensus 39 F~nCt~CGPR~tii~~lPYDR~~TsM~~F~mC~~C~~EY~dp~dRRfHAqp~aCp~CGP~l 99 (657)
T 3ttc_A 39 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPYL 99 (657)
T ss_dssp TCCBTTBBCSGGGBSSSSCSGGGBGGGGSCCCHHHHHHHHCTTSTTTTCTTCCCTTTSCCE
T ss_pred cccCcCCCchHHhcccCCCCCCCCcccCCCCChHHHHHhCCCCCCcCcCCCCcCcccCccc
Confidence 345899999999876542 334433334 799999988
No 399
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=25.39 E-value=58 Score=24.09 Aligned_cols=14 Identities=14% Similarity=0.373 Sum_probs=11.4
Q ss_pred CCeeccCCCccccc
Q 020131 41 DSFHCENCNGELVA 54 (330)
Q Consensus 41 ~~F~C~~Cg~eL~~ 54 (330)
+.+.||.|..++..
T Consensus 49 ~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 49 ENGLCPACRKPYPE 62 (78)
T ss_dssp SCSBCTTTCCBCSS
T ss_pred CCCCCCCCCCccCC
Confidence 46899999998854
No 400
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=25.27 E-value=13 Score=36.16 Aligned_cols=39 Identities=23% Similarity=0.472 Sum_probs=22.2
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeec--------cCCCccccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHC--------ENCNGELVA 54 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C--------~~Cg~eL~~ 54 (330)
....|..|++.|........+.+....-.| +.||+.|..
T Consensus 137 ~~~~C~~C~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~CgG~LRP 183 (355)
T 3pki_A 137 FVEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGELRD 183 (355)
T ss_dssp TEEEETTTCCEEEBSSCCSCCSSCEEEEECCCCCBTTBCCCCCEEEE
T ss_pred CceeeCCCCCccchHHhhhhcccCCCCCccccccccccccCCCccCC
Confidence 456899999999743322211111111355 479988754
No 401
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=25.22 E-value=28 Score=26.58 Aligned_cols=33 Identities=21% Similarity=0.496 Sum_probs=19.2
Q ss_pred cCCCCccccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 20 CPNCQRRYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 20 CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
|..||..|-..=....+.. ..+.||.|..++..
T Consensus 38 ~~~CgH~FC~~Ci~~~~~~--~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 38 CPHCSKLCCFSCIRRWLTE--QRAQCPHCRAPLQL 70 (100)
T ss_dssp CTTTCCEEEHHHHHHHHHH--TCSBCTTTCCBCCG
T ss_pred cCCCCChhhHHHHHHHHHH--CcCCCCCCCCcCCH
Confidence 3455555554333333332 13899999999854
No 402
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=25.03 E-value=28 Score=25.76 Aligned_cols=24 Identities=21% Similarity=0.753 Sum_probs=17.8
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
...|..|+++... ..|.| +||...
T Consensus 15 ~~rC~~C~kkvgl-----------~~f~C-rCg~~F 38 (64)
T 1wg2_A 15 NNRCFSCNKKVGV-----------MGFKC-KCGSTF 38 (64)
T ss_dssp SCSCTTTCCCCTT-----------SCEEC-TTSCEE
T ss_pred CCcChhhCCcccc-----------cCeEe-ecCCEe
Confidence 4689999998432 16999 899764
No 403
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=24.94 E-value=22 Score=38.96 Aligned_cols=34 Identities=26% Similarity=0.599 Sum_probs=24.2
Q ss_pred CeeecCCCC-ccccHHHHHhhcCCCCCCeeccCCCc
Q 020131 16 QEYICPNCQ-RRYNALDALRLVSLEDDSFHCENCNG 50 (330)
Q Consensus 16 ~~Y~CP~C~-~~YT~lDA~~Lld~~~~~F~C~~Cg~ 50 (330)
..|.||.|| ..|..++. ++||+..-.=.||.|.+
T Consensus 274 ~~~~c~~~g~~~~~~~~p-~~FSfN~p~GaCp~C~G 308 (993)
T 2ygr_A 274 EKLACPNGHALAVDDLEP-RSFSFNSPYGACPDCSG 308 (993)
T ss_dssp SSCBCTTCCCCSCSCCCG-GGGCTTSTTTBCTTTTT
T ss_pred ccccCCCCCCcccCCCCh-hhcCcCCCCCCCCCCcC
Confidence 458899999 77765443 45666554568999984
No 404
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=24.73 E-value=23 Score=29.92 Aligned_cols=18 Identities=17% Similarity=0.632 Sum_probs=14.1
Q ss_pred CCCeeecCCCCccccHHH
Q 020131 14 TVQEYICPNCQRRYNALD 31 (330)
Q Consensus 14 ~~~~Y~CP~C~~~YT~lD 31 (330)
+..-|+||.|+..|+..+
T Consensus 41 Dg~l~vCPeC~hEW~~~~ 58 (138)
T 2akl_A 41 DGALLVCPECAHEWSPNE 58 (138)
T ss_dssp CSSSEEETTTTEEECTTT
T ss_pred cCCeEECCccccccCCcc
Confidence 345799999999998544
No 405
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=24.59 E-value=13 Score=35.48 Aligned_cols=39 Identities=23% Similarity=0.472 Sum_probs=20.8
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeec--------cCCCccccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHC--------ENCNGELVA 54 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C--------~~Cg~eL~~ 54 (330)
....|..|++.|........+.+....-+| +.||+.|..
T Consensus 137 ~~~~C~~C~~~~~~~~~~~~~~~~p~~~~C~~~~~~~c~~CgG~LRP 183 (318)
T 3k35_A 137 FVEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGELRD 183 (318)
T ss_dssp TEEEETTTCCEEECSSCCSCCSSCEEEEECCC--------CCCEEEE
T ss_pred CeeEeCCCCCccchHHhhhhcccCCCCCcCcccccccccCcCCeeCC
Confidence 356899999999743222211111011246 479998755
No 406
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=24.56 E-value=12 Score=34.51 Aligned_cols=12 Identities=17% Similarity=0.407 Sum_probs=10.2
Q ss_pred eeecCCCCcccc
Q 020131 17 EYICPNCQRRYN 28 (330)
Q Consensus 17 ~Y~CP~C~~~YT 28 (330)
...|..|++.|.
T Consensus 134 ~~~C~~C~~~~~ 145 (273)
T 3riy_A 134 KTRCTSCGVVAE 145 (273)
T ss_dssp EEEETTTCCEEE
T ss_pred eeEcCCCCCccc
Confidence 468999999985
No 407
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=24.53 E-value=30 Score=27.77 Aligned_cols=12 Identities=42% Similarity=1.066 Sum_probs=9.2
Q ss_pred CeeccCCCcccc
Q 020131 42 SFHCENCNGELV 53 (330)
Q Consensus 42 ~F~C~~Cg~eL~ 53 (330)
.|.|++|+-.+.
T Consensus 70 ~~~C~nC~R~va 81 (99)
T 3mhs_C 70 YIHCENCGRDVS 81 (99)
T ss_dssp EEECTTTCCEEE
T ss_pred eEECCCCCCCch
Confidence 588888888774
No 408
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=24.45 E-value=55 Score=30.49 Aligned_cols=41 Identities=15% Similarity=0.337 Sum_probs=27.1
Q ss_pred CCCCeeecCC-------------CCccccHHHHHhhcCCCCCCeeccC--CCccccc
Q 020131 13 NTVQEYICPN-------------CQRRYNALDALRLVSLEDDSFHCEN--CNGELVA 54 (330)
Q Consensus 13 ~~~~~Y~CP~-------------C~~~YT~lDA~~Lld~~~~~F~C~~--Cg~eL~~ 54 (330)
.....++||. ||..|--.=...++.. .+.|.||. |+..+..
T Consensus 177 ~~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~-~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 177 GGKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQG-YTTRDCPQAACSQVVSM 232 (267)
T ss_dssp SSBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTT-CSCEECSGGGCSCEECG
T ss_pred CCceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHh-CCCCCCCcccccCcCch
Confidence 3456788886 5555655444555542 35699999 9998854
No 409
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=24.38 E-value=16 Score=26.31 Aligned_cols=36 Identities=19% Similarity=0.582 Sum_probs=23.3
Q ss_pred ecCCCCccccHHHHHhhcCC--CCCCeeccCCCccccc
Q 020131 19 ICPNCQRRYNALDALRLVSL--EDDSFHCENCNGELVA 54 (330)
Q Consensus 19 ~CP~C~~~YT~lDA~~Lld~--~~~~F~C~~Cg~eL~~ 54 (330)
+|+.|+......+.+..++- -..=|.|..|+.+|..
T Consensus 2 ~C~~C~~~I~~~~~v~a~~~~~H~~CF~C~~C~~~L~~ 39 (76)
T 1iml_A 2 KCPKCDKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTS 39 (76)
T ss_dssp BCTTTSSBCCGGGEEEETTEEEETTTCBCTTTCCBCCT
T ss_pred cCCCCCCEEECceEEEECCccccCCCCCccccCccCCC
Confidence 58899987765443322221 1235899999999854
No 410
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=24.37 E-value=21 Score=29.59 Aligned_cols=21 Identities=19% Similarity=0.262 Sum_probs=16.7
Q ss_pred CCeeecCCCCccccHHHHHhh
Q 020131 15 VQEYICPNCQRRYNALDALRL 35 (330)
Q Consensus 15 ~~~Y~CP~C~~~YT~lDA~~L 35 (330)
...|.|..|++.|+....+..
T Consensus 48 ekpfyC~~C~K~F~~~~~L~~ 68 (124)
T 1zr9_A 48 GGLHRCLACARYFIDSTNLKT 68 (124)
T ss_dssp GGCSEETTTTEECSSHHHHHH
T ss_pred CcceEcccCcchhCCHHHHHH
Confidence 356999999999988766655
No 411
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=24.29 E-value=35 Score=21.49 Aligned_cols=24 Identities=17% Similarity=0.785 Sum_probs=16.1
Q ss_pred eeecCCCCcc-ccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 17 EYICPNCQRR-YNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 17 ~Y~CP~C~~~-YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
-.+||.|+.. |.. ...|-.|+.+-
T Consensus 5 DW~C~~C~~~Nfa~------------r~~C~~C~~pr 29 (32)
T 2lk0_A 5 DWLCNKCCLNNFRK------------RLKCFRCGADK 29 (32)
T ss_dssp EEECTTTCCEEETT------------CCBCTTTCCBT
T ss_pred CCCcCcCcCCcChh------------cceecCCCCcC
Confidence 4788888753 322 56788888764
No 412
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=24.27 E-value=11 Score=26.38 Aligned_cols=37 Identities=14% Similarity=0.488 Sum_probs=24.5
Q ss_pred eecCCCCccccHHH-HHhhcC--CCCCCeeccCCCccccc
Q 020131 18 YICPNCQRRYNALD-ALRLVS--LEDDSFHCENCNGELVA 54 (330)
Q Consensus 18 Y~CP~C~~~YT~lD-A~~Lld--~~~~~F~C~~Cg~eL~~ 54 (330)
-+|..|+......+ ++...+ .-..=|.|..|+.+|..
T Consensus 12 ~~C~~C~~~i~~~e~~~~~~~~~~H~~CF~C~~C~~~L~~ 51 (72)
T 3f6q_B 12 ATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPE 51 (72)
T ss_dssp CBCTTTCCBCCTTCEEEEETTEEEETTTSSCTTTCCCCGG
T ss_pred ccchhcCccccCCceEEEeCcCeeCcCCCcccCCCCCCCC
Confidence 47999999877544 222111 12346999999999954
No 413
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.18 E-value=19 Score=25.94 Aligned_cols=35 Identities=14% Similarity=0.350 Sum_probs=22.2
Q ss_pred eecCCCCccccHHHHHhhcC--CCCCCeeccCCCcccc
Q 020131 18 YICPNCQRRYNALDALRLVS--LEDDSFHCENCNGELV 53 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld--~~~~~F~C~~Cg~eL~ 53 (330)
-+|+.|+...+. .++..++ .-..=|.|..|+.+|.
T Consensus 6 ~~C~~C~~~I~~-~~v~a~~~~wH~~CF~C~~C~~~L~ 42 (73)
T 1wig_A 6 SGCDSCEKYITG-RVLEAGEKHYHPSCALCVRCGQMFA 42 (73)
T ss_dssp CSCSSSCCCCSS-CCBCCSSCCBCTTTSCCSSSCCCCC
T ss_pred CCcccCCCEecC-eeEEeCCCCCCCCcCEeCCCCCCCC
Confidence 479999987764 2222111 1124589999999986
No 414
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.99 E-value=50 Score=22.81 Aligned_cols=37 Identities=27% Similarity=0.602 Sum_probs=22.7
Q ss_pred CeeecCCCCc------------cccHHHHHhhcCCCCCCeeccCCCccccc
Q 020131 16 QEYICPNCQR------------RYNALDALRLVSLEDDSFHCENCNGELVA 54 (330)
Q Consensus 16 ~~Y~CP~C~~------------~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~ 54 (330)
..|.||.|.. .|-..=+..++. .....||.|+.++..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~--~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQTECGHRFCESCMAALLS--SSSPKCTACQESIVK 62 (66)
T ss_dssp CCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHT--TSSCCCTTTCCCCCT
T ss_pred cCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHH--hCcCCCCCCCcCCCh
Confidence 4577876544 444333344432 246789999998854
No 415
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=23.67 E-value=33 Score=25.41 Aligned_cols=25 Identities=24% Similarity=0.743 Sum_probs=18.6
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
....|..|+++... ..|.| +||...
T Consensus 14 ~~~rC~~C~kkvgl-----------~~f~C-rCg~~F 38 (64)
T 1wfh_A 14 RPNRCTVCRKRVGL-----------TGFMC-RCGTTF 38 (64)
T ss_dssp SCCCCTTTCCCCCT-----------TCEEC-SSSCEE
T ss_pred cCCcChhhCCccCc-----------cCEEe-ecCCEe
Confidence 35789999998543 16999 799764
No 416
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.67 E-value=25 Score=25.49 Aligned_cols=35 Identities=14% Similarity=0.330 Sum_probs=22.9
Q ss_pred ecCCCCccccHHHHHhhcC--CCCCCeeccCCCccccc
Q 020131 19 ICPNCQRRYNALDALRLVS--LEDDSFHCENCNGELVA 54 (330)
Q Consensus 19 ~CP~C~~~YT~lDA~~Lld--~~~~~F~C~~Cg~eL~~ 54 (330)
+|+.|++... ..++..++ .-..=|.|..|+..|..
T Consensus 17 ~C~~C~~~I~-~~~~~a~~~~~H~~CF~C~~C~~~L~~ 53 (81)
T 1x6a_A 17 FCHGCSLLMT-GPFMVAGEFKYHPECFACMSCKVIIED 53 (81)
T ss_dssp BCTTTCCBCC-SCCBCCTTCCBCTTSCBCTTTCCBCCT
T ss_pred cCccCCCCcC-ceEEEECCceeccccCCccCCCCccCC
Confidence 7999999877 22222222 12345899999999953
No 417
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=23.65 E-value=19 Score=34.47 Aligned_cols=34 Identities=12% Similarity=0.260 Sum_probs=21.7
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~e 51 (330)
...|..|+..|...+....+... ..-+|+.|+..
T Consensus 161 ~~~C~~C~~~~~~~~~~~~~~~~-~~P~Cp~C~~~ 194 (354)
T 2hjh_A 161 TATCVTCHWNLPGERIFNKIRNL-ELPLCPYCYKK 194 (354)
T ss_dssp EEEETTTCCEEEGGGGHHHHHTT-CCCBCTTTHHH
T ss_pred ccccCCCCCcCCHHHHHHHhhcc-CCCcCcccccc
Confidence 46799999998754443332111 13589999854
No 418
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=23.27 E-value=2.4e+02 Score=21.33 Aligned_cols=14 Identities=29% Similarity=0.797 Sum_probs=11.9
Q ss_pred CeeccCCCcccccc
Q 020131 42 SFHCENCNGELVAE 55 (330)
Q Consensus 42 ~F~C~~Cg~eL~~~ 55 (330)
.|.|++|+.-|..+
T Consensus 3 kYyCdYCd~~lt~D 16 (77)
T 3cw1_L 3 KFYCDYCDTYLTHD 16 (77)
T ss_pred CcccccCCceecCC
Confidence 68999999999665
No 419
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=23.10 E-value=35 Score=21.24 Aligned_cols=10 Identities=30% Similarity=0.873 Sum_probs=5.0
Q ss_pred eeccCCCccc
Q 020131 43 FHCENCNGEL 52 (330)
Q Consensus 43 F~C~~Cg~eL 52 (330)
|.|+.|...+
T Consensus 4 ~~CpvCk~q~ 13 (28)
T 2jvx_A 4 FCCPKCQYQA 13 (28)
T ss_dssp EECTTSSCEE
T ss_pred ccCccccccC
Confidence 4555555444
No 420
>3alr_A Nanos protein; zinc-finger, translational repression, RNA, 3'-UTR, metal BI protein; 2.10A {Danio rerio}
Probab=22.76 E-value=25 Score=28.55 Aligned_cols=10 Identities=40% Similarity=1.105 Sum_probs=8.7
Q ss_pred eeecCCCCcc
Q 020131 17 EYICPNCQRR 26 (330)
Q Consensus 17 ~Y~CP~C~~~ 26 (330)
.|+||.||++
T Consensus 71 ~Y~CpiCGAT 80 (106)
T 3alr_A 71 QYKCPLCGAT 80 (106)
T ss_dssp GCCCTTTCCC
T ss_pred cccCCCCCCc
Confidence 5999999986
No 421
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.73 E-value=18 Score=27.08 Aligned_cols=38 Identities=24% Similarity=0.509 Sum_probs=25.0
Q ss_pred eeecCCCCccccHHHHHhhcCC--CCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALDALRLVSL--EDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~--~~~~F~C~~Cg~eL~~ 54 (330)
.-+|..|+......+.+..++- -..=|.|..|+.+|..
T Consensus 15 ~~~C~~C~~~I~~~~~v~a~~~~~H~~CF~C~~C~~~L~~ 54 (91)
T 2d8y_A 15 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSL 54 (91)
T ss_dssp SCBCTTTCCBCCTTSEEECSSSEEETTTCBCTTTCCBCCT
T ss_pred CCcCccCCCccCCceeEEECCCEECCCCCeeCCCCCCCCC
Confidence 3479999998875443322221 1235999999999964
No 422
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=22.65 E-value=14 Score=26.95 Aligned_cols=38 Identities=18% Similarity=0.378 Sum_probs=24.6
Q ss_pred eeecCCCCccccHHHHHhhcC--CCCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNALDALRLVS--LEDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld--~~~~~F~C~~Cg~eL~~ 54 (330)
.-+|+.|++.....+.+..++ .-..=|.|..|+.+|..
T Consensus 7 ~~~C~~C~~~I~~~~~~~a~~~~~H~~CF~C~~C~~~L~~ 46 (81)
T 1a7i_A 7 GNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDS 46 (81)
T ss_dssp -CBCSSSCCBCSSTTEEEETTEEEESSSEECSSSCCEECS
T ss_pred CCcCcCcCccccCceeEEeCCcccccccCccCCCCCCCCC
Confidence 357999999876444332222 11245999999999954
No 423
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=22.43 E-value=38 Score=25.71 Aligned_cols=21 Identities=24% Similarity=0.517 Sum_probs=16.0
Q ss_pred CCeeecC--CCCccccHHHHHhh
Q 020131 15 VQEYICP--NCQRRYNALDALRL 35 (330)
Q Consensus 15 ~~~Y~CP--~C~~~YT~lDA~~L 35 (330)
...|+|+ .|++.|+...-+..
T Consensus 25 EKPYkC~~~~CgKaFsr~s~L~~ 47 (73)
T 1x3c_A 25 YRPYRCVHQGCFAAFTIQQNLIL 47 (73)
T ss_dssp SCSCBCCSTTCCCBCSSHHHHHH
T ss_pred CCCeECCCCCcChhHcCHHHHHH
Confidence 4579996 49999997776643
No 424
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.37 E-value=20 Score=25.30 Aligned_cols=38 Identities=18% Similarity=0.364 Sum_probs=24.3
Q ss_pred eeecCCCCccccHH-HHHhhcCC--CCCCeeccCCCccccc
Q 020131 17 EYICPNCQRRYNAL-DALRLVSL--EDDSFHCENCNGELVA 54 (330)
Q Consensus 17 ~Y~CP~C~~~YT~l-DA~~Lld~--~~~~F~C~~Cg~eL~~ 54 (330)
.-+|+.|++..... .++..++- -..=|.|..|+.+|..
T Consensus 5 ~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~ 45 (72)
T 1wyh_A 5 SSGCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGS 45 (72)
T ss_dssp CCBCSSSCCBCCSSSCEECSTTCCEETTTCBCTTTCCBTTT
T ss_pred CCCCccCCCccccCccEEEECccccCcccCeECCCCCcCCC
Confidence 35799999987643 23222211 1235999999999964
No 425
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=22.25 E-value=13 Score=30.00 Aligned_cols=37 Identities=16% Similarity=0.360 Sum_probs=23.8
Q ss_pred eeecCCCCccccHHHHHhhcC--CCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRLVS--LEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld--~~~~~F~C~~Cg~eL~ 53 (330)
.-+|+.|++.-....++..++ ....=|+|..|+.+|.
T Consensus 61 ~~~C~~C~~~I~~~~~v~a~~~~wH~~CF~C~~C~~~L~ 99 (123)
T 2l4z_A 61 WKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLG 99 (123)
T ss_dssp CSBBSSSSSBCCSSSEEEETTEEEETTTSBCTTTCCBGG
T ss_pred CCcCcCCCCCcCCcEEEEeCCcEEcccccCcCcCCCccc
Confidence 468999998766332222111 1124599999999996
No 426
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=22.25 E-value=24 Score=26.26 Aligned_cols=38 Identities=18% Similarity=0.459 Sum_probs=24.7
Q ss_pred CeeecCCCCccccHHHHHhhcC--CCCCCeeccCCCccccc
Q 020131 16 QEYICPNCQRRYNALDALRLVS--LEDDSFHCENCNGELVA 54 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld--~~~~~F~C~~Cg~eL~~ 54 (330)
..-+|..|++.... .++..++ ....=|.|..|+..|..
T Consensus 24 ~~~~C~~C~~~I~~-~~~~a~~~~~H~~CF~C~~C~~~L~~ 63 (89)
T 1x64_A 24 RMPLCDKCGSGIVG-AVVKARDKYRHPECFVCADCNLNLKQ 63 (89)
T ss_dssp SCCBCTTTCCBCCS-CCEESSSCEECTTTCCCSSSCCCTTT
T ss_pred cCCCcccCCCEecc-cEEEECCceECccCCEecCCCCCCCC
Confidence 45689999987664 2222222 12245999999999964
No 427
>3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus}
Probab=22.08 E-value=18 Score=36.73 Aligned_cols=34 Identities=12% Similarity=0.350 Sum_probs=21.8
Q ss_pred CCeeecCC--CCccccHHH--HHhhcCCCCCCeeccCCCc
Q 020131 15 VQEYICPN--CQRRYNALD--ALRLVSLEDDSFHCENCNG 50 (330)
Q Consensus 15 ~~~Y~CP~--C~~~YT~lD--A~~Lld~~~~~F~C~~Cg~ 50 (330)
...|.|+. |+..+...+ ... ..-...+.|+.|+.
T Consensus 133 ~~~~~C~~~~C~~~~~~~~~~~~~--~~~~~p~~C~~C~~ 170 (595)
T 3f9v_A 133 KATYKHIHPDCMQEFEWPEDEEMP--EVLEMPTICPKCGK 170 (595)
T ss_dssp ECCCEEESSSCCCBCCSSCSSCCC--SSCCCCSSCTTTCC
T ss_pred EEEEEecCCCCCCEEEEEeccccC--CcccCCCcCCCCCC
Confidence 45799999 998886431 111 11123579999997
No 428
>2be7_D Aspartate carbamoyltransferase regulatory chain; atcase, psychrophilic, cold adaptation, alloste holoenzyme; 2.85A {Moritella profunda}
Probab=22.06 E-value=9.9 Score=32.81 Aligned_cols=13 Identities=15% Similarity=0.583 Sum_probs=10.9
Q ss_pred CCeeccCCCcccc
Q 020131 41 DSFHCENCNGELV 53 (330)
Q Consensus 41 ~~F~C~~Cg~eL~ 53 (330)
..|+|.||+..+.
T Consensus 133 ~~lrC~YCe~~~~ 145 (153)
T 2be7_D 133 IGLKCKYCEKTFS 145 (153)
T ss_dssp EEEEETTTCCEEE
T ss_pred CEEEeeCCCCEec
Confidence 3699999999874
No 429
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=21.84 E-value=24 Score=27.65 Aligned_cols=21 Identities=14% Similarity=0.426 Sum_probs=14.0
Q ss_pred hcCCCCeeecCCCCccccHHH
Q 020131 11 CKNTVQEYICPNCQRRYNALD 31 (330)
Q Consensus 11 ~~~~~~~Y~CP~C~~~YT~lD 31 (330)
......+-+|-.||+.|..|-
T Consensus 15 ksi~~d~iiClecGK~fK~Lk 35 (87)
T 2jsp_A 15 KSVQDDHIVCLECGGSFKSLK 35 (87)
T ss_dssp TTBCSSCEECTBTCCEESBHH
T ss_pred hccCCCceEecccchhhHHHH
Confidence 344556677777887777655
No 430
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=21.78 E-value=19 Score=34.30 Aligned_cols=32 Identities=19% Similarity=0.507 Sum_probs=0.0
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccch
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAESD 57 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~~ 57 (330)
.-.|+.|+..|+++ .-..+|..||..+-...+
T Consensus 375 ~~~c~~c~~~f~~~---------~r~h~Cr~Cg~~~C~~Cs 406 (434)
T 3mpx_A 375 VMMCMNCGCDFSLT---------LRRHHCHACGKIVCRNCS 406 (434)
T ss_dssp -----------------------------------------
T ss_pred CCcCCCcCCCCCCc---------chhhhcccCcCEeehhhC
Confidence 45799999999853 125899999998866554
No 431
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=21.68 E-value=54 Score=23.85 Aligned_cols=17 Identities=29% Similarity=0.692 Sum_probs=11.1
Q ss_pred cCCCCeeecCCCCcccc
Q 020131 12 KNTVQEYICPNCQRRYN 28 (330)
Q Consensus 12 ~~~~~~Y~CP~C~~~YT 28 (330)
+.....++|+.|++.+.
T Consensus 13 ~~~~~~~~C~~C~~~~~ 29 (75)
T 2k16_A 13 EWGNQIWICPGCNKPDD 29 (75)
T ss_dssp SSSCEEECBTTTTBCCS
T ss_pred ccCCCCcCCCCCCCCCC
Confidence 34445677888887753
No 432
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=21.29 E-value=38 Score=25.78 Aligned_cols=24 Identities=21% Similarity=0.789 Sum_probs=18.0
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGEL 52 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL 52 (330)
...|..|+++... ..|.| +||...
T Consensus 25 ~~RC~~C~kkvgL-----------~~f~C-rCg~~F 48 (74)
T 1wfp_A 25 ATRCLSCNKKVGV-----------TGFKC-RCGSTF 48 (74)
T ss_dssp CCBCSSSCCBCTT-----------TCEEC-TTSCEE
T ss_pred CccchhhcCcccc-----------cceEe-ccCCEe
Confidence 4679999988543 26999 799764
No 433
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=21.18 E-value=44 Score=28.46 Aligned_cols=29 Identities=24% Similarity=0.540 Sum_probs=19.5
Q ss_pred eeecCCCCccccHHHHHhhcCCCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~ 53 (330)
.-.|.+|+..|.++ ++. .-.|..|...+=
T Consensus 68 ~~~C~~C~~~fg~l-----~~~---g~~C~~C~~~VC 96 (153)
T 2zet_C 68 ETHCARCLQPYRLL-----LNS---RRQCLECSLFVC 96 (153)
T ss_dssp GTBCTTTCCBGGGC-----SSC---CEECTTTCCEEC
T ss_pred CccchhhcCccccc-----cCC---CCcCCCCCchhh
Confidence 56899999999984 332 455666655553
No 434
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=21.15 E-value=18 Score=25.36 Aligned_cols=36 Identities=17% Similarity=0.568 Sum_probs=23.8
Q ss_pred eecCCCCccccHH-HHHhhcCC--C--CCCeeccCCCcccc
Q 020131 18 YICPNCQRRYNAL-DALRLVSL--E--DDSFHCENCNGELV 53 (330)
Q Consensus 18 Y~CP~C~~~YT~l-DA~~Lld~--~--~~~F~C~~Cg~eL~ 53 (330)
-+|+.|+...... .++..++- - ..=|.|..|+.+|.
T Consensus 3 ~~C~~C~~~I~~~~~~v~a~~~~wH~~~~CF~C~~C~~~L~ 43 (65)
T 2iyb_E 3 VVCQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCLI 43 (65)
T ss_dssp EECTTTSSEECTTSCEEEETTEEEETTTTTSBCTTTCCBCT
T ss_pred CCCcCCCCeeccCceEEEECCCccCCCCCCEECCCCCCcCC
Confidence 3799999987752 33333221 1 34589999999995
No 435
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.14 E-value=23 Score=25.07 Aligned_cols=37 Identities=16% Similarity=0.382 Sum_probs=22.9
Q ss_pred eeecCCCCccccHHH-HHhhcC--CCCCCeeccCCCcccc
Q 020131 17 EYICPNCQRRYNALD-ALRLVS--LEDDSFHCENCNGELV 53 (330)
Q Consensus 17 ~Y~CP~C~~~YT~lD-A~~Lld--~~~~~F~C~~Cg~eL~ 53 (330)
.-+|..|+......+ ++..++ .-..=|.|..|+.+|.
T Consensus 5 ~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~ 44 (72)
T 1x61_A 5 SSGCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLR 44 (72)
T ss_dssp CCCCSSSCSCCCSSSCCEECSSSEECTTTCBCSSSCCBCT
T ss_pred CCCCccCCCccCCCceEEEECCCeEcccCCcccccCCcCC
Confidence 357999998655321 222111 1224699999999994
No 436
>4ddu_A Reverse gyrase; topoisomerase, DNA supercoiling, archaea, helicase, hydrolas; 3.00A {Thermotoga maritima} PDB: 4ddt_A 4ddv_A 4ddw_A 4ddx_A
Probab=20.44 E-value=38 Score=37.12 Aligned_cols=27 Identities=30% Similarity=0.470 Sum_probs=19.2
Q ss_pred eecCCCCccccHHHHHhhcCCCCCCeeccCCCcc
Q 020131 18 YICPNCQRRYNALDALRLVSLEDDSFHCENCNGE 51 (330)
Q Consensus 18 Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~e 51 (330)
..||+||...+...... .|.|..|+.+
T Consensus 9 ~~C~~Cg~~~~~~~l~~-------~l~c~~C~~~ 35 (1104)
T 4ddu_A 9 HSCINCGGLNTDERNER-------GLPCEVCLPE 35 (1104)
T ss_dssp TCCTTTSSCEEHHHHTT-------TCCCTTTCCC
T ss_pred hcCCCCcCcCchhHHhc-------CCCCcccCCc
Confidence 47999999776433221 5889999865
No 437
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A*
Probab=20.43 E-value=15 Score=39.56 Aligned_cols=37 Identities=22% Similarity=0.326 Sum_probs=3.6
Q ss_pred cCCCCeeecCCCCccccHHHHHhhcCCCCCCeeccCCCccccccc
Q 020131 12 KNTVQEYICPNCQRRYNALDALRLVSLEDDSFHCENCNGELVAES 56 (330)
Q Consensus 12 ~~~~~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~eL~~~~ 56 (330)
......|.||.|+.-++..++.+ -.|++||.+++..+
T Consensus 171 ~~~~~v~wcp~~~t~La~~ev~~--------g~~~~~g~~ve~~~ 207 (880)
T 4arc_A 171 KKTSAVNWCPNDQTVLANEQVID--------GCCWRCDTKVERKE 207 (880)
T ss_dssp EEEECC--------------------------------------C
T ss_pred EeceeEeecCCcCCEecchhhhc--------CcCcCCCCccEEEE
Confidence 44556788999999998877632 36999999986543
No 438
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=20.05 E-value=28 Score=35.21 Aligned_cols=34 Identities=12% Similarity=0.235 Sum_probs=20.8
Q ss_pred CeeecCCCCccccHHHHHhhcCCCCCCeeccCCCc
Q 020131 16 QEYICPNCQRRYNALDALRLVSLEDDSFHCENCNG 50 (330)
Q Consensus 16 ~~Y~CP~C~~~YT~lDA~~Lld~~~~~F~C~~Cg~ 50 (330)
....|..|+.+|...+....+.. ...-+|+.|+.
T Consensus 298 ~~~~C~~Cg~~~~~e~i~~~i~~-~~~P~Cp~Cg~ 331 (492)
T 4iao_A 298 ATATCVTCHWNLPGERIFNKIRN-LELPLCPYCYK 331 (492)
T ss_dssp TEEEETTTCCEEEGGGGHHHHHT-TCCCBCTTTHH
T ss_pred ceeecCCCCCcCCHHHHHHHHhc-cCCCCCccccc
Confidence 35689999999985443322111 12357999973
Done!