Query 020132
Match_columns 330
No_of_seqs 201 out of 1966
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 12:16:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tvi_A Aspartokinase; structur 100.0 5.6E-54 1.9E-58 424.3 16.2 263 34-307 107-440 (446)
2 2cdq_A Aspartokinase; aspartat 100.0 1.4E-54 4.9E-59 434.9 10.1 288 16-306 115-484 (510)
3 2j0w_A Lysine-sensitive aspart 100.0 1.2E-52 4.2E-57 415.9 12.2 268 32-305 107-448 (449)
4 3c1m_A Probable aspartokinase; 100.0 2E-52 6.7E-57 417.4 12.2 281 15-304 96-381 (473)
5 3l76_A Aspartokinase; alloster 100.0 1.3E-48 4.6E-53 399.2 11.5 270 32-307 62-419 (600)
6 3ab4_A Aspartokinase; aspartat 100.0 7.6E-47 2.6E-51 372.2 11.9 268 32-310 62-335 (421)
7 2jjx_A Uridylate kinase, UMP k 99.9 9E-23 3.1E-27 187.9 7.3 149 45-217 88-247 (255)
8 1ybd_A Uridylate kinase; alpha 99.9 4.6E-23 1.6E-27 187.7 5.1 156 37-216 75-239 (239)
9 2j4j_A Uridylate kinase; trans 99.9 7.6E-23 2.6E-27 184.9 6.3 148 34-216 62-225 (226)
10 2a1f_A Uridylate kinase; PYRH, 99.9 6.8E-23 2.3E-27 187.8 5.3 157 36-216 75-240 (247)
11 4a7w_A Uridylate kinase; trans 99.9 2.1E-22 7.1E-27 184.0 5.9 147 44-214 83-239 (240)
12 3ek6_A Uridylate kinase; UMPK 99.8 5.6E-22 1.9E-26 181.5 6.2 148 45-216 85-241 (243)
13 2j5v_A Glutamate 5-kinase; pro 99.8 6.6E-22 2.3E-26 191.0 6.7 168 36-218 72-259 (367)
14 3ll9_A Isopentenyl phosphate k 99.8 7.5E-22 2.6E-26 183.2 6.1 155 50-215 93-266 (269)
15 2ap9_A NAG kinase, acetylgluta 99.8 3.6E-22 1.2E-26 187.9 3.9 168 39-217 100-291 (299)
16 1z9d_A Uridylate kinase, UK, U 99.8 7.7E-22 2.6E-26 181.3 5.3 154 41-218 79-242 (252)
17 2ogx_A Molybdenum storage prot 99.8 1.6E-21 5.3E-26 181.7 5.9 126 88-217 133-272 (276)
18 2brx_A Uridylate kinase; UMP k 99.8 2.6E-21 8.9E-26 177.0 4.6 148 34-216 82-244 (244)
19 2va1_A Uridylate kinase; UMPK, 99.8 2.3E-20 7.8E-25 171.9 8.7 147 45-215 99-255 (256)
20 2ako_A Glutamate 5-kinase; str 99.8 3.6E-21 1.2E-25 176.6 2.0 158 37-207 66-232 (251)
21 3d40_A FOMA protein; fosfomyci 99.8 4.5E-21 1.5E-25 179.4 2.2 155 39-208 94-259 (286)
22 2egx_A Putative acetylglutamat 99.8 1.2E-20 4.2E-25 174.9 4.6 167 36-214 71-268 (269)
23 3nwy_A Uridylate kinase; allos 99.8 1.2E-20 4E-25 175.9 4.1 154 38-215 118-280 (281)
24 2ij9_A Uridylate kinase; struc 99.8 5.4E-20 1.8E-24 165.3 5.5 144 34-214 60-218 (219)
25 1gs5_A Acetylglutamate kinase; 99.8 3.9E-20 1.3E-24 170.4 4.1 155 43-215 81-257 (258)
26 2rd5_A Acetylglutamate kinase- 99.8 1.5E-19 5.2E-24 169.9 4.7 160 42-216 114-298 (298)
27 2ogx_B Molybdenum storage prot 99.8 5.2E-19 1.8E-23 164.1 7.6 124 90-216 132-269 (270)
28 2v5h_A Acetylglutamate kinase; 99.8 1.5E-19 5.2E-24 171.7 3.2 162 41-217 126-311 (321)
29 2bty_A Acetylglutamate kinase; 99.7 1E-18 3.4E-23 163.0 5.0 156 42-216 99-279 (282)
30 3ll5_A Gamma-glutamyl kinase r 99.7 1.2E-18 4.1E-23 159.8 5.1 144 46-207 84-232 (249)
31 2buf_A Acetylglutamate kinase; 99.7 4E-18 1.4E-22 160.4 4.6 163 40-217 102-297 (300)
32 3l86_A Acetylglutamate kinase; 99.7 1.9E-18 6.4E-23 160.9 2.3 148 49-216 117-278 (279)
33 1e19_A Carbamate kinase-like c 99.7 1.7E-17 5.9E-22 157.0 6.2 119 90-216 177-314 (314)
34 3k4o_A Isopentenyl phosphate k 99.7 6.3E-17 2.1E-21 149.8 7.9 145 50-217 102-265 (266)
35 2e9y_A Carbamate kinase; trans 99.6 1.5E-15 5.1E-20 143.8 5.6 119 90-216 177-315 (316)
36 3d2m_A Putative acetylglutamat 99.5 2.2E-15 7.5E-20 149.1 4.7 152 49-217 124-304 (456)
37 3zzh_A Acetylglutamate kinase; 99.5 2.9E-15 1E-19 141.0 5.3 158 42-217 123-302 (307)
38 2we5_A Carbamate kinase 1; arg 99.5 4.3E-15 1.5E-19 140.3 3.9 119 90-215 173-309 (310)
39 4ab7_A Protein Arg5,6, mitocho 99.5 1.6E-14 5.3E-19 142.8 7.8 155 48-218 127-303 (464)
40 4go7_X Aspartokinase; transfer 99.5 8.4E-15 2.9E-19 129.8 4.2 74 232-307 106-179 (200)
41 3s6g_A N-acetylglutamate kinas 99.5 4.5E-14 1.5E-18 139.7 6.5 157 42-217 133-311 (460)
42 3kzf_A Carbamate kinase; argin 99.4 2.9E-14 1E-18 133.9 3.6 123 90-216 179-316 (317)
43 3mah_A Aspartokinase; aspartat 99.4 7.5E-14 2.5E-18 119.1 5.6 74 232-307 79-152 (157)
44 3s1t_A Aspartokinase; ACT doma 99.4 3.1E-13 1E-17 118.1 4.4 73 232-306 87-159 (181)
45 3s6k_A Acetylglutamate kinase; 99.3 1E-13 3.5E-18 137.3 0.1 158 42-217 136-314 (467)
46 2dt9_A Aspartokinase; protein- 99.3 5.2E-13 1.8E-17 114.9 4.3 72 234-307 88-159 (167)
47 3c1m_A Probable aspartokinase; 99.3 2E-12 7E-17 128.6 6.0 75 232-306 395-469 (473)
48 2dtj_A Aspartokinase; protein- 99.3 1.4E-12 4.9E-17 113.4 4.3 74 232-307 86-159 (178)
49 3l76_A Aspartokinase; alloster 99.2 1.6E-11 5.6E-16 125.4 7.5 73 233-307 519-591 (600)
50 2re1_A Aspartokinase, alpha an 99.2 1.3E-11 4.5E-16 106.1 5.8 73 232-306 94-166 (167)
51 4axs_A Carbamate kinase; oxido 99.1 2.6E-11 8.9E-16 115.1 3.5 119 90-215 194-331 (332)
52 3ab4_A Aspartokinase; aspartat 99.1 4.9E-11 1.7E-15 117.0 5.4 73 232-306 335-407 (421)
53 4go7_X Aspartokinase; transfer 98.9 7.7E-10 2.6E-14 97.8 4.3 83 228-313 22-109 (200)
54 2dt9_A Aspartokinase; protein- 98.9 1.1E-09 3.8E-14 93.9 5.1 78 230-310 5-87 (167)
55 3s1t_A Aspartokinase; ACT doma 98.8 1.7E-09 5.9E-14 94.2 4.8 82 229-313 4-90 (181)
56 3mah_A Aspartokinase; aspartat 98.8 1.5E-09 5.2E-14 92.2 2.2 73 228-302 5-78 (157)
57 2re1_A Aspartokinase, alpha an 98.7 8.5E-09 2.9E-13 88.4 5.1 79 229-310 13-94 (167)
58 2dtj_A Aspartokinase; protein- 98.5 4.6E-08 1.6E-12 84.8 3.2 77 230-309 4-85 (178)
59 2cdq_A Aspartokinase; aspartat 98.1 2.7E-06 9.2E-11 85.2 6.6 62 230-293 330-391 (510)
60 2f06_A Conserved hypothetical 98.0 4.8E-06 1.6E-10 69.1 4.8 61 242-303 70-131 (144)
61 2j0w_A Lysine-sensitive aspart 97.8 2.5E-06 8.6E-11 84.1 0.0 62 230-293 297-358 (449)
62 3tvi_A Aspartokinase; structur 97.0 0.00031 1.1E-08 69.1 3.6 79 231-311 288-366 (446)
63 2f06_A Conserved hypothetical 95.8 0.0089 3.1E-07 49.0 4.8 50 251-302 13-64 (144)
64 1zhv_A Hypothetical protein AT 94.7 0.082 2.8E-06 43.3 7.0 67 234-303 55-121 (134)
65 1zvp_A Hypothetical protein VC 92.7 0.15 5.2E-06 41.6 5.2 64 236-302 66-129 (133)
66 2nyi_A Unknown protein; protei 92.2 0.099 3.4E-06 45.1 3.7 84 239-326 91-185 (195)
67 1zpv_A ACT domain protein; str 88.6 0.61 2.1E-05 34.4 4.9 59 241-302 5-68 (91)
68 1u8s_A Glycine cleavage system 85.2 1 3.6E-05 38.2 5.1 60 240-304 5-66 (192)
69 2pc6_A Probable acetolactate s 85.2 0.64 2.2E-05 39.2 3.6 52 251-304 11-66 (165)
70 3kbq_A Protein TA0487; structu 85.1 3.7 0.00013 34.7 8.4 79 36-140 5-91 (172)
71 2f1f_A Acetolactate synthase i 85.1 0.74 2.5E-05 38.8 3.9 51 251-301 10-66 (164)
72 2ko1_A CTR148A, GTP pyrophosph 82.2 2.3 7.9E-05 30.6 5.3 56 242-300 6-66 (88)
73 2fgc_A Acetolactate synthase, 81.8 1.3 4.3E-05 38.4 4.1 52 251-304 36-91 (193)
74 1u8s_A Glycine cleavage system 76.8 2.2 7.7E-05 36.1 4.2 37 240-279 92-128 (192)
75 1y7p_A Hypothetical protein AF 70.3 3.3 0.00011 36.5 3.6 52 251-302 11-69 (223)
76 3p96_A Phosphoserine phosphata 68.6 4.4 0.00015 38.4 4.5 38 240-280 11-48 (415)
77 3o1l_A Formyltetrahydrofolate 65.3 4.5 0.00015 37.3 3.6 36 241-279 22-57 (302)
78 2nyi_A Unknown protein; protei 63.4 5.2 0.00018 34.1 3.5 63 240-305 4-70 (195)
79 3lou_A Formyltetrahydrofolate 58.0 7.4 0.00025 35.6 3.7 36 240-278 9-44 (292)
80 3n0v_A Formyltetrahydrofolate 57.2 13 0.00043 33.9 5.1 35 241-278 8-42 (286)
81 1y5e_A Molybdenum cofactor bio 56.2 32 0.0011 28.3 7.1 79 36-138 15-99 (169)
82 3obi_A Formyltetrahydrofolate 55.8 5.8 0.0002 36.3 2.6 35 241-278 6-40 (288)
83 3nrb_A Formyltetrahydrofolate 55.6 10 0.00036 34.5 4.3 36 240-278 6-41 (287)
84 3iwt_A 178AA long hypothetical 46.8 44 0.0015 27.5 6.6 68 46-137 40-107 (178)
85 1mkz_A Molybdenum cofactor bio 46.3 41 0.0014 27.8 6.2 79 36-138 12-96 (172)
86 3rfq_A Pterin-4-alpha-carbinol 42.7 67 0.0023 27.1 7.1 79 35-138 31-116 (185)
87 2pjk_A 178AA long hypothetical 40.3 61 0.0021 27.0 6.4 68 47-138 41-108 (178)
88 1uz5_A MOEA protein, 402AA lon 40.2 84 0.0029 29.8 8.1 70 47-145 208-277 (402)
89 2fts_A Gephyrin; gephyrin, neu 40.1 49 0.0017 31.6 6.4 72 47-145 209-280 (419)
90 2is8_A Molybdopterin biosynthe 39.1 57 0.0019 26.6 6.0 68 47-138 22-89 (164)
91 3mtj_A Homoserine dehydrogenas 34.4 30 0.001 33.5 4.0 52 251-302 366-425 (444)
92 2jhe_A Transcription regulator 32.4 45 0.0015 26.6 4.3 41 252-293 8-48 (190)
93 1uuy_A CNX1, molybdopterin bio 28.6 1.6E+02 0.0055 23.8 7.1 67 48-138 27-98 (167)
94 2g2c_A Putative molybdenum cof 28.6 80 0.0027 25.8 5.2 67 47-138 26-96 (167)
95 1g8l_A Molybdopterin biosynthe 28.3 1.6E+02 0.0055 27.9 8.0 70 47-145 205-274 (411)
96 1jlj_A Gephyrin; globular alph 27.7 1.7E+02 0.0057 24.5 7.2 78 36-137 16-104 (189)
97 3pzy_A MOG; ssgcid, seattle st 25.8 1.3E+02 0.0046 24.4 6.1 77 36-138 9-93 (164)
98 1di6_A MOGA, molybdenum cofact 23.9 1.5E+02 0.0053 24.9 6.3 70 47-138 24-93 (195)
99 2pbq_A Molybdenum cofactor bio 23.5 2.3E+02 0.0079 23.2 7.2 78 36-138 7-95 (178)
100 3pdk_A Phosphoglucosamine muta 21.6 2.9E+02 0.0098 26.5 8.4 51 14-66 175-225 (469)
101 3cpr_A Dihydrodipicolinate syn 20.8 2.9E+02 0.01 24.7 7.9 79 48-146 39-119 (304)
102 2wkj_A N-acetylneuraminate lya 20.7 2.8E+02 0.0095 24.8 7.7 79 48-146 34-114 (303)
No 1
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=5.6e-54 Score=424.32 Aligned_cols=263 Identities=31% Similarity=0.450 Sum_probs=228.5
Q ss_pred cccceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecC
Q 020132 34 SFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIAST 113 (330)
Q Consensus 34 ~~~~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~ 113 (330)
+..|+++|+||+||+++|+.+| ++.++++++++++++ + ...+.+.+.+.++++++ .+.|||++||+|.+
T Consensus 107 ~~~D~lls~GE~lS~~lla~~l-----~a~~~~~~~~~~~~~---~-~~~~~~~~~~~l~~~l~--~~~v~Vv~Gf~g~~ 175 (446)
T 3tvi_A 107 ASSDYAASRGEYLNGVILAKYL-----NAEFIDAAEVIFFDK---S-GCFDEKKSYEKIKEKVL--SCNKAVIPGFYGSS 175 (446)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH-----TCEECCGGGTCBBCC------CBCHHHHHHHHHHHTT--TCSSEECCCSEEEC
T ss_pred ccHHHHHHhHHHHHHHHHHHHh-----cceeECHHHheeeCC---C-CceehHhhHHHHHHHHh--cCCeEEeeCceecC
Confidence 6789999999999999999996 588999999987765 2 23456667789999997 78999999999999
Q ss_pred CCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcccccccccccceee
Q 020132 114 PDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVM 193 (330)
Q Consensus 114 ~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~a~~~a~ 193 (330)
++|.++|+||||||++|+++|.+|+|+++++||||||||++||+++|+|+++++++|+|+.+|+++|+++|||+|+++|+
T Consensus 176 ~~g~~~tl~rGgsD~~Aa~lA~~l~A~~~~i~TDVdGvyt~dP~~~~~a~~i~~is~~e~~ela~~Ga~vl~~~a~~~a~ 255 (446)
T 3tvi_A 176 FNGDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTISKISYKELRELSYMGATVLHEEAIFPVK 255 (446)
T ss_dssp TTSCEEECSSSTTHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHTTTC----CCSTTTHHHH
T ss_pred CCCCeEEEccCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCcCCCCeEcceeCHHHHHHHHhCCCCcchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccceEEeeeccccCceeEeeCCCCC--C--------------------Cccc--------------------------
Q 020132 194 RYDIPIVIRNIFNLSVPGIMICRPPVD--E--------------------NEDE-------------------------- 225 (330)
Q Consensus 194 ~~~i~v~i~~~~~~~~~GT~I~~~~~~--~--------------------~~~~-------------------------- 225 (330)
++|||++|+|+++|+.+||+|.+.... . ..|.
T Consensus 256 ~~~ipi~i~~~~~p~~~GT~i~~~~~~~~~~~~v~gIa~~~~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~~~ 335 (446)
T 3tvi_A 256 DSGIPINIKNTNKPSDPGTLILSDTHKEINLGTITGIAGKKNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSG 335 (446)
T ss_dssp HSSCCEEEEETTBTTSCCEEEECTTTSCCCTTCCCEEEEEEEEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBCEE
T ss_pred HcCCeEEEecCCCCCCCCEEEecCCcccccCcceEEEEecCCEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEecC
Confidence 999999999999999999999754210 0 0000
Q ss_pred ----------cccc-------------CCcccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcc
Q 020132 226 ----------QIID-------------SPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEH 282 (330)
Q Consensus 226 ----------~~~~-------------~~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~ 282 (330)
.... -....+.+.+++|+|++||.||+++||+++|+|++|+++||||.||+|++|++
T Consensus 336 ~~~is~~V~~~d~~~~~~~~~~el~~~~~~~~v~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtSei 415 (446)
T 3tvi_A 336 VDSVSLVIEDCKLDGKCDKIIEEIKKQCNPDSIEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSSEI 415 (446)
T ss_dssp TTEEEEEEEHHHHTTTHHHHHHHHHHHSCCSEEEEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSCTT
T ss_pred CCEEEEEEecchHHHHHHHHHHHHHHhcCCCcEEEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCCCc
Confidence 0000 01234777899999999999999999999999999999999999999999999
Q ss_pred eeeeecchhhHHHHHHHHHHHHHHH
Q 020132 283 SVCFAVPEKEVKAVAEALESKFREA 307 (330)
Q Consensus 283 sIS~vv~~~d~~~av~~Lh~~f~~~ 307 (330)
+|||+|+++|.++|+++||+.||+.
T Consensus 416 ~Is~vV~~~d~~~Av~aLH~~ff~~ 440 (446)
T 3tvi_A 416 NVIVGVETVDFEKAVKSIYNAFNEG 440 (446)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHC--
T ss_pred eEEEEEcHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999864
No 2
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=100.00 E-value=1.4e-54 Score=434.95 Aligned_cols=288 Identities=28% Similarity=0.420 Sum_probs=246.5
Q ss_pred HHhhhcccccCCC-----CCccccccceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCc---hh
Q 020132 16 IRSTYNFLSNVDS-----GHATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDF---SE 87 (330)
Q Consensus 16 i~~~~~~l~~~~~-----~~~~~~~~~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~---~~ 87 (330)
+...++.|++++. .+.+++.+|.++|+||++|+.+++.+|+++|++|+++++.++.+++++.+++.+++. ..
T Consensus 115 i~~~~~~l~~~l~~~~~~~~~~~r~~d~l~s~GE~~s~~ll~~~L~~~Gi~A~~l~~~~~~l~t~~~~~~~~i~~~~~~~ 194 (510)
T 2cdq_A 115 ILTYLEELEQLLKGIAMMKELTLRTRDYLVSFGECLSTRIFAAYLNTIGVKARQYDAFEIGFITTDDFTNGDILEATYPA 194 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECGGGTTCEECSCSTTCCBCTTHHHH
T ss_pred HHHHHHHHHHHHhhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEhhHeeEEEecCCCccchhhHHHHH
Confidence 4444555555432 466789999999999999999999999999999999999998445656666655442 22
Q ss_pred hHHHHHH-hhccCCCccEEEeeeeecCC-CCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhh
Q 020132 88 SEKRLEK-WFSQSPSNTIIATGFIASTP-DNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVIL 165 (330)
Q Consensus 88 ~~~~i~~-~l~~~~~~VpVv~G~i~~~~-~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i 165 (330)
..+.+.+ +++ .+.|||++||+|.++ +|.++|+||||||++|+++|.+|+|+.+++||||||||++||+.+|+|+++
T Consensus 195 ~~~~l~~~Ll~--~g~IpVv~Gf~g~~~~~g~ittlgrGgsD~tAa~lA~~l~Ad~l~i~TDVdGVytaDPr~v~~A~~I 272 (510)
T 2cdq_A 195 VAKRLYDDWMH--DPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPV 272 (510)
T ss_dssp HHHHHHHHHHH--SCCEEEEESSEEEETTTCCEEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCCBC
T ss_pred HHHHHHHHHHh--CCcEEEEeCccccCCCCCceEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCcCCCCCCCCCCCEEe
Confidence 3455554 556 689999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHhhhhhhcccccccccccceeeecccceEEeeeccccCceeEeeCCCC-CC-------------------Ccc-
Q 020132 166 RTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIFNLSVPGIMICRPPV-DE-------------------NED- 224 (330)
Q Consensus 166 ~~is~~e~~~l~~~g~~v~~p~a~~~a~~~~i~v~i~~~~~~~~~GT~I~~~~~-~~-------------------~~~- 224 (330)
++++|+|+.+|+++|+++|||+|+++|.++|||++|+|+++|+.+||+|.+... +. ..|
T Consensus 273 ~~Is~~E~~ela~~Ga~vmh~~a~~~a~~~gIpv~I~n~~~p~~~GT~I~~~~~~~~~~v~gIa~~~~~~~I~i~~~~m~ 352 (510)
T 2cdq_A 273 PYLTFDEAAELAYFGAQVLHPQSMRPAREGEIPVRVKNSYNPKAPGTIITKTRDMTKSILTSIVLKRNVTMLDIASTRML 352 (510)
T ss_dssp CEEEHHHHHHHHHHHSSCCCHHHHHHHHHHTCCEEEEETTSTTSCCEEEESCCCCTTCCEEEEEEEEEEEEEEEECGGGT
T ss_pred cEeCHHHHHHHHhcCcchhHHHHHHHHHHCCCeEEEEccCcCCCCCeEEeccccccccccccccccCCeEEEEEEcCCCC
Confidence 999999999999999999999999999999999999999999999999986421 00 000
Q ss_pred ---------------------------------cc--c-c---------------cCCcccceeecceeEEeeecccccC
Q 020132 225 ---------------------------------EQ--I-I---------------DSPVKGFATIDNLALVNVEGTGMAG 253 (330)
Q Consensus 225 ---------------------------------~~--~-~---------------~~~~~~i~~~~nia~IsvvG~~~~~ 253 (330)
.. . . -+.+..+.+.+|+|+|++||. |+.
T Consensus 353 ~~~g~~~~if~~la~~~I~vd~I~sse~sis~~v~~~~~~~~~~~~~~l~~~~~el~~~~~v~~~~~~a~VsiVG~-m~~ 431 (510)
T 2cdq_A 353 GQVGFLAKVFSIFEELGISVDVVATSEVSISLTLDPSKLWSRELIQQELDHVVEELEKIAVVNLLKGRAIISLIGN-VQH 431 (510)
T ss_dssp TCTTHHHHHHHHHHHTTCCEEEEEEETTEEEEEECCGGGSSSCCCHHHHHHHHHHHTTTSEEEEEEEEEEEEEEEC-GGG
T ss_pred CcccHHHHHHHHHHHcCCcEEEEEeCCCeEEEEEechHhhhhhHHHHHHHHHHHHhCCCCeEEEeCCcEEEEEEEE-CCC
Confidence 00 0 0 011346778899999999999 999
Q ss_pred CCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHHHH
Q 020132 254 VPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFRE 306 (330)
Q Consensus 254 ~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f~~ 306 (330)
+||+++|+|++|+++||||.||+||+|+++|||+|+++|.++|+++||+.|+.
T Consensus 432 ~~Gvaa~~f~aL~~~~InI~mIsqGsSei~Is~vV~~~d~~~Av~aLH~~f~~ 484 (510)
T 2cdq_A 432 SSLILERAFHVLYTKGVNVQMISQGASKVNISFIVNEAEAEGCVQALHKSFFE 484 (510)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEECTTCSEEEEEEEHHHHHHHHHHHHHHHHS
T ss_pred ChhHHHHHHHHHHHCCCCEEEEEecCCcceEEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999985
No 3
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=100.00 E-value=1.2e-52 Score=415.86 Aligned_cols=268 Identities=32% Similarity=0.587 Sum_probs=234.5
Q ss_pred cccccceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHH----HHHHhhccCCCccEEEe
Q 020132 32 TESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEK----RLEKWFSQSPSNTIIAT 107 (330)
Q Consensus 32 ~~~~~~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~----~i~~~l~~~~~~VpVv~ 107 (330)
+++.+|.++|+||.+|+.+++.+|+++|++|+++++.++ +.+++.+++.+++...+.+ .++.+++ +.|||++
T Consensus 107 ~~~~~d~l~s~Ge~~s~~l~~~~L~~~Gi~a~~l~~~~~-l~t~~~~~~~~~~~~~~~~~~~~~l~~l~~---~~IpVv~ 182 (449)
T 2j0w_A 107 SPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKV-MRTNDRFGRAEPDIAALAELAALQLLPRLN---EGLVITQ 182 (449)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEECCGGGT-CBBCSCTTSCCBCHHHHHHHHHHHTHHHHH---HSEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEchHHh-eeecCCCCCccccHhHhHHHHHHHHHHHhc---CCEEEEe
Confidence 478899999999999999999999999999999999999 4566777776676544333 3344443 4599999
Q ss_pred eeeecCCCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhccccccccc
Q 020132 108 GFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPR 187 (330)
Q Consensus 108 G~i~~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~ 187 (330)
||+|.+++|.++++||||||++|+.+|.+|+|+++++||||||||++||+.+|+++++++++|+|+.+++++|+++|||+
T Consensus 183 Gf~g~~~~g~~ttl~rGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~DPr~~~~a~~i~~is~~e~~ela~~G~kvlh~~ 262 (449)
T 2j0w_A 183 GFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPA 262 (449)
T ss_dssp SSEEECTTSCEEECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEEEHHHHHHHHHTTCTTSCTT
T ss_pred CCeeeCCCCCEEEeCCCChHHHHHHHHHHCCCCEEEEccccCCcCcCCCCCCCCCEEccCccHHHHHHHHhcCCccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeecccceEEeeeccccCceeEeeCCCCCC-------------------Ccc------------------------
Q 020132 188 TIIPVMRYDIPIVIRNIFNLSVPGIMICRPPVDE-------------------NED------------------------ 224 (330)
Q Consensus 188 a~~~a~~~~i~v~i~~~~~~~~~GT~I~~~~~~~-------------------~~~------------------------ 224 (330)
|+++|.++|||++|+|+++|+.+||+|.+...+. ..|
T Consensus 263 a~~~a~~~gi~v~I~~~~~p~~~GT~I~~~~~~~~~v~gIa~~~~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i 342 (449)
T 2j0w_A 263 TLLPAVRSDIPVFVGSSKDPRAGGTLVCNKTENPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLI 342 (449)
T ss_dssp THHHHHHHTCCEEEEESSCTTSCCEEEESCCSSCCSEEEEEEEEEEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEE
T ss_pred HHHHHHHCCCeEEEEECCCCCCCeeEEecccccccccccceeeCCEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEE
Confidence 9999999999999999999999999998652100 000
Q ss_pred ----------cccc----c-------------CCcccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEec
Q 020132 225 ----------EQII----D-------------SPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQ 277 (330)
Q Consensus 225 ----------~~~~----~-------------~~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq 277 (330)
.... . +.+..+.+.+|+++|++||.+|+.+||+.+|+|++|++ |||.||+|
T Consensus 343 ~ss~~sis~~v~~~~~~~~~~~~~~~~~~~el~~~~~v~~~~~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mIsq 420 (449)
T 2j0w_A 343 TTSEVSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALVALIGNDLSKACGVGKEVFGVLEP--FNIRMICY 420 (449)
T ss_dssp EEETTEEEEEECCCCCSSTTCCSSCHHHHHHHHHHSCEEEEEEEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEEEE
T ss_pred EeCCCeEEEEEeccccchhhHHHHHHHHHHHhccCCeEEEeCCeEEEEEECCCccccccHHHHHHHHHhC--CCeEEEEe
Confidence 0000 0 00345778889999999999999999999999999976 99999999
Q ss_pred cCCcceeeeecchhhHHHHHHHHHHHHH
Q 020132 278 ASSEHSVCFAVPEKEVKAVAEALESKFR 305 (330)
Q Consensus 278 ~~se~sIS~vv~~~d~~~av~~Lh~~f~ 305 (330)
++|+++|||+|+++|.++|+++||+.|+
T Consensus 421 g~Se~~Is~vV~~~d~~~Av~~lh~~f~ 448 (449)
T 2j0w_A 421 GASSHNLCFLVPGEDAEQVVQKLHSNLF 448 (449)
T ss_dssp SSCTTEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEEeHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999997
No 4
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=100.00 E-value=2e-52 Score=417.37 Aligned_cols=281 Identities=40% Similarity=0.575 Sum_probs=255.5
Q ss_pred HHHhhhcccccCCC-----CCccccccceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhH
Q 020132 15 FIRSTYNFLSNVDS-----GHATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESE 89 (330)
Q Consensus 15 ~i~~~~~~l~~~~~-----~~~~~~~~~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~ 89 (330)
.|...++.|++++. ++++++.+|+++++||++|+++++.+|+++|++|+++++.++.+++++.+|+.+++.....
T Consensus 96 ~i~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~ge~~s~~l~~~~L~~~G~~a~~l~~~~~~i~t~~~~~~~~~~~~~~~ 175 (473)
T 3c1m_A 96 IIDSRIEELEKVLIGVAYLGELTPKSRDYILSFGERLSSPILSGAIRDLGEKSIALEGGEAGIITDNNFGSARVKRLEVK 175 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECHHHHTEEECSCTTSCCEEEECHH
T ss_pred HHHHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEchheeEEEccCCCCccccHhhhH
Confidence 45556666666543 4678889999999999999999999999999999999999994456666776666555566
Q ss_pred HHHHHhhccCCCccEEEeeeeecCCCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhh
Q 020132 90 KRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLS 169 (330)
Q Consensus 90 ~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is 169 (330)
+.++.+++ .+.|||++||+|.+++|.++++||||+|++|+.+|.+|+|+.+++||||||||++||+.+|+++++++++
T Consensus 176 ~~i~~ll~--~g~ipVv~G~~g~~~~g~~~~l~rg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dP~~~~~a~~i~~is 253 (473)
T 3c1m_A 176 ERLLPLLK--EGIIPVVTGFIGTTEEGYITTLGRGGSDYSAALIGYGLDADIIEIWTDVSGVYTTDPRLVPTARRIPKLS 253 (473)
T ss_dssp HHHHHHHH--TTCEEEEESSEEEETTSCEEECCTTTHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEE
T ss_pred HHHHHHHh--CCcEEEEeCCcccCCCCCEEEeCCCChHHHHHHHHHHcCCCEEEEeeCCCcceeCCCCCCCCCeEecccC
Confidence 88998887 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhhhhhcccccccccccceeeecccceEEeeeccccCceeEeeCCCCCCCcccccccCCcccceeecceeEEeeecc
Q 020132 170 YQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIFNLSVPGIMICRPPVDENEDEQIIDSPVKGFATIDNLALVNVEGT 249 (330)
Q Consensus 170 ~~e~~~l~~~g~~v~~p~a~~~a~~~~i~v~i~~~~~~~~~GT~I~~~~~~~~~~~~~~~~~~~~i~~~~nia~IsvvG~ 249 (330)
|+|+.+++.+|+++|||+|+++|.++|+|++|+|+++|+.+||+|.+... . ....+++|+.++|+++|+++|.
T Consensus 254 ~~e~~~l~~~g~~~m~~~a~~~a~~~gi~v~I~~~~~~~~~GT~i~~~~~-~------~~~~v~gIa~~~~~a~Isv~g~ 326 (473)
T 3c1m_A 254 YIEAMELAYFGAKVLHPRTIEPAMEKGIPILVKNTFEPESEGTLITNDME-M------SDSIVKAISTIKNVALINIFGA 326 (473)
T ss_dssp HHHHHHHHHTTCTTSCGGGHHHHHHHTCCEEEEETTSTTSCCEEEESCCC-C------CTTSCCEEEEEEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHcCCEEEEEecCCCCCceEEEecccc-c------cccccchhhccCCeEEEEEecC
Confidence 99999999999999999999999999999999999999999999987532 1 2346899999999999999999
Q ss_pred cccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHH
Q 020132 250 GMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKF 304 (330)
Q Consensus 250 ~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f 304 (330)
+|.+.+|+.+++|+.|+++||+|+||+|++|+.+|||+|++++.+++++.||+.|
T Consensus 327 ~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~~Is~~V~~~d~~~a~~~L~~~l 381 (473)
T 3c1m_A 327 GMVGVSGTAARIFKALGEEEVNVILISQGSSETNISLVVSEEDVDKALKALKREF 381 (473)
T ss_dssp SSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTCCEEEEEEGGGHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEechHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999887
No 5
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=100.00 E-value=1.3e-48 Score=399.25 Aligned_cols=270 Identities=29% Similarity=0.443 Sum_probs=228.8
Q ss_pred cccccceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeee
Q 020132 32 TESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIA 111 (330)
Q Consensus 32 ~~~~~~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~ 111 (330)
+++..|.++++||++|+.+++.+|+++|++|+++++.++.+++++.+++.++..... +.++++++ .+.|||++||+|
T Consensus 62 ~~~~~d~l~s~Ge~~s~~l~~~~l~~~G~~a~~l~~~~~~l~~~~~~~~~~~~~~~~-~~i~~ll~--~g~IpVv~Gf~g 138 (600)
T 3l76_A 62 CRREMDMLLSTGEQVSIALLSLALQEIDQPAISLTGAQVGIVTEAEHSRARILEIRP-DRLEHHLR--EGKVVVVAGFQG 138 (600)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTEEEEC-------CCEEEE-CCHHHHHT--TTCEEEEECEEE
T ss_pred CHHHHHHHHHHhHHHHHHHHHHHHHhCCCCeEEechhHcceEEecCCCCceeccccH-HHHHHHHh--CCCEEEEECCee
Confidence 456788999999999999999999999999999999998777776666544433211 56788887 789999999999
Q ss_pred cCCCC--CcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhccccccccccc
Q 020132 112 STPDN--IPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTI 189 (330)
Q Consensus 112 ~~~~g--~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~a~ 189 (330)
.+++| .+++|||||||++|+.+|.+|+|+++++||||||||++||+++|+|+++++++|+|+.+|+++|+++|||+|+
T Consensus 139 ~~~~g~~~~~tlgrGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~ela~~G~~vm~p~a~ 218 (600)
T 3l76_A 139 ISSVEHLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAV 218 (600)
T ss_dssp C----CEEEECCCTTHHHHHHHHHHHHHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHTGGGGTTTCCHHHH
T ss_pred cCCCCCEEEecCCCCChHHHHHHHHHHcCCCEEEEEECCCcCCCCCCCCCCCCeEeeEEcHHHHHHHHhCCCCccHHHHH
Confidence 99999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeecccceEEeeeccccCceeEeeCCCC---------CCC-----------------cc-------------------
Q 020132 190 IPVMRYDIPIVIRNIFNLSVPGIMICRPPV---------DEN-----------------ED------------------- 224 (330)
Q Consensus 190 ~~a~~~~i~v~i~~~~~~~~~GT~I~~~~~---------~~~-----------------~~------------------- 224 (330)
++|+++|||++|+|++++ .+||+|.+... ... .+
T Consensus 219 ~~a~~~gipv~I~n~~~~-~~GT~I~~~~~~~~~~~~~~~~~~v~gi~~~~~~~~i~i~~~~~~~g~~~~if~~La~~~I 297 (600)
T 3l76_A 219 EIARNYGIPLVVRSSWSD-EPGTKVVAPPVQNRSLVGLEIAKAVDGVEYDADQAKVALLRVPDRPGVASKLFRDIAQQQV 297 (600)
T ss_dssp HHHHHHTCCEEEEETTCC-SCCEEEECCCCCSCCCCCCBSSCSCCEEEEECCCEEEEEEEEECSTTHHHHHHHHHHHTTC
T ss_pred HHHHHCCCeEEEEECCCC-CCCeEEecCCccccccccccccCcceEEEeeCCEEEEEEeCCCCcccHHHHHHHHHHHcCC
Confidence 999999999999999984 68999975431 000 00
Q ss_pred -----cc---------------------------ccc---------CCcccceeecceeEEeeecccccCCCCchhhhhh
Q 020132 225 -----EQ---------------------------IID---------SPVKGFATIDNLALVNVEGTGMAGVPGTANAIFG 263 (330)
Q Consensus 225 -----~~---------------------------~~~---------~~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~ 263 (330)
.+ ... ..+..+.+.+++++|++||.+|+++||+++++|+
T Consensus 298 ~Vd~I~qs~~~~~~~~Isftv~~~~~~~a~~~l~~~~~el~~~~~~~~~~~v~~~~~~a~VsvVG~gm~~~~Gv~a~if~ 377 (600)
T 3l76_A 298 DIDLIIQSIHDGNSNDIAFTVVKDLLNTAEAVTSAIAPALRSYPEADQEAEIIVEKGIAKIAIAGAGMIGRPGIAAKMFK 377 (600)
T ss_dssp CCCCEEBCCCBTTEEEEEEEECGGGHHHHHHHHHHHGGGGSSSTTCSSSSEEEEECSEEEEEEECGGGTTCTTHHHHHHH
T ss_pred CEEEEEeeccCCCCceEEEEEeHHHHHHHHHHHHHHHHHhhccccccCcceeEecCCeEEEEEECCCcccCccHHHHHHH
Confidence 00 000 0345677889999999999999999999999999
Q ss_pred hhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHHHHH
Q 020132 264 AVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREA 307 (330)
Q Consensus 264 ~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f~~~ 307 (330)
+|++++|||.||+ +|+++|||+|+++|.++|+++||+.|+.+
T Consensus 378 aL~~~~Ini~~is--tSe~~Is~vI~~~d~~~Av~aLh~~f~~~ 419 (600)
T 3l76_A 378 TLADVGVNIEMIS--TSEVKVSCVIDQRDADRAIAALSNAFGVT 419 (600)
T ss_dssp HHHHTTCCCCEEE--ECSSEEEEEEEGGGHHHHHHHHHHHTTCC
T ss_pred HHHhCCCcEEEEe--cCCCEEEEEEcHHHHHHHHHHHHHhhccc
Confidence 9999999999999 77999999999999999999999999764
No 6
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=100.00 E-value=7.6e-47 Score=372.16 Aligned_cols=268 Identities=26% Similarity=0.381 Sum_probs=209.5
Q ss_pred cccccceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeee
Q 020132 32 TESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIA 111 (330)
Q Consensus 32 ~~~~~~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~ 111 (330)
+++..+.++++||.+++.+++.+|+++|++++++++.++.+.++..+++.++... ..+.++++++ .+.|||++||+|
T Consensus 62 ~~~~~d~~~a~Ge~~~~~ll~~~L~~~G~~a~~l~~~~~~~~t~~~~~~~~v~~~-~~~~i~~~l~--~g~ipVv~g~~g 138 (421)
T 3ab4_A 62 PAREMDMLLTAGERISNALVAMAIESLGAEAQSFTGSQAGVLTTERHGNARIVDV-TPGRVREALD--EGKICIVAGFQG 138 (421)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECCCC-----------------C-CHHHHHHHHH--TTCEEEC-----
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEehhhceEEeccCCCCeeechh-hHHHHHHHHh--CCCEEEEeCCcC
Confidence 4567888999999999999999999999999999999986666555554333321 2278888888 789999999999
Q ss_pred cCCC-CCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcccccccccccc
Q 020132 112 STPD-NIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTII 190 (330)
Q Consensus 112 ~~~~-g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~a~~ 190 (330)
.+++ |.++++||||||++|+.+|.+|+|+++++||||||||++||+.+|+++++++++|+|+.+|+++|++++||+|++
T Consensus 139 ~~~~~g~~~tlgrg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~el~~~Ga~v~~~~a~~ 218 (421)
T 3ab4_A 139 VNKETRDVTTLGRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVE 218 (421)
T ss_dssp -------------CCHHHHHHHHHHHHTCSEEEEEESCCSCBSSCTTTSTTCCBCSEECHHHHHHHHHTTCCSSCHHHHH
T ss_pred cCCCCCceEEeCCCCHHHHHHHHHHHCCCCEEEEEECCCccCcCCCCCCCCCeEccccCHHHHHHHHhcCCcCchHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecccceEEeeeccccCceeEeeCCCCCCCcccccccCCcccceeecceeEEeeecccccCCCCchhhhhhhhcccCc
Q 020132 191 PVMRYDIPIVIRNIFNLSVPGIMICRPPVDENEDEQIIDSPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGA 270 (330)
Q Consensus 191 ~a~~~~i~v~i~~~~~~~~~GT~I~~~~~~~~~~~~~~~~~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI 270 (330)
+|.++|||++|+|+++| .+||+|.+...+. + .....+++++.++|+++|++.| |.+.||+++++|+.|+++||
T Consensus 219 ~a~~~gi~v~I~n~~~~-~~GT~I~~~~~~~--~--~~~~~i~~i~~~~~~~~i~v~~--~~~~~g~~~~If~~La~~~I 291 (421)
T 3ab4_A 219 YARAFNVPLRVRSSYSN-DPGTLIAGSMEDI--P--VEEAVLTGVATDKSEAKVTVLG--ISDKPGEAAKVFRALADAEI 291 (421)
T ss_dssp HHHHTTCCEEEEESSSC-CCCEEECSCGGGS--C--TTTCCCCEEEEECSEEEEEEEE--EESSTTHHHHHHHHHHHTTC
T ss_pred HHHHcCCCEEEecCcCC-CCCeEEEecCccc--c--cccCccceEEeeCCEEEEEEec--cCCcccHHHHHHHHHHHcCC
Confidence 99999999999999998 6899997641100 0 0234689999999999999997 78889999999999999999
Q ss_pred cEEEEeccCCc-----ceeeeecchhhHHHHHHHHHHHHHHHhcc
Q 020132 271 NVIMISQASSE-----HSVCFAVPEKEVKAVAEALESKFREALNA 310 (330)
Q Consensus 271 ~I~~Isq~~se-----~sIS~vv~~~d~~~av~~Lh~~f~~~~~~ 310 (330)
+|+||+|++|+ .+|+|+|++++.+++.+.|++ +..+++.
T Consensus 292 ~vd~I~q~~s~~~~g~~~isf~v~~~~~~~a~~~l~~-~~~~~~~ 335 (421)
T 3ab4_A 292 NIDMVLQNVFSVEDGTTDITFTCPRSDGRRAMEILKK-LQVQGNW 335 (421)
T ss_dssp CCEEEEECCCC--CCEEEEEEEEETTTHHHHHHHHHH-HHTTTTC
T ss_pred cEEEEEccCccccCCcceEEEEEechhHHHHHHHHHH-HHHHcCC
Confidence 99999997774 789999999999999988877 5556654
No 7
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=99.87 E-value=9e-23 Score=187.88 Aligned_cols=149 Identities=17% Similarity=0.274 Sum_probs=122.7
Q ss_pred hhHHHHHHHHHHh-cCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccc
Q 020132 45 LWSAQMLAAVVRK-NGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKR 123 (330)
Q Consensus 45 ~~sa~~~~~~L~~-~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgr 123 (330)
.+++.+++..|.+ .|+++.++++.++...++ ..+. ..+..+++ .|.|||++| + ++++.++
T Consensus 88 ~~~~~ll~~~l~~~~Gi~a~~l~~~~~~~v~~------~~~~----~~~~~lL~--~g~IpVi~g--g-~g~~~vt---- 148 (255)
T 2jjx_A 88 IINSLMLRGVLTSKTNKEVRVMTSIPFNAVAE------PYIR----LRAVHHLD--NGYIVIFGG--G-NGQPFVT---- 148 (255)
T ss_dssp HHHHHHHHHHHHHHCSSCEEEEESSCCCSSSE------ECCH----HHHHHHHH--TTCEEEEES--T-TSCSSCC----
T ss_pred HHHHHHHHHHHHhhcCCceEEecHHHcCcccC------cccH----HHHHHHHh--CCcEEEEeC--C-CCCCccc----
Confidence 5677778999999 999999998887642221 1122 33447787 789999998 3 3333322
Q ss_pred cCcchhHHHHHHHHhhceeEEEe-ecccccccCccchhHhhhhhhhhhHHhhhhhhcccccccccccceeeecccceEEe
Q 020132 124 DGSDFSAAIMGALLRAHQVTIWT-DVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIR 202 (330)
Q Consensus 124 ggsD~~A~~lA~~l~A~~l~~~t-dv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~a~~~a~~~~i~v~i~ 202 (330)
+|++|+.+|.+|+|+++++|| ||||||++||+++|+++++++++++|+.++ |.++|+|.|+++|.++|+|++|.
T Consensus 149 --tD~~Aa~lA~~l~Ad~liilT~DVdGVy~~dP~~~p~a~~i~~is~~e~~~~---G~~~m~~~a~~~a~~~gi~v~I~ 223 (255)
T 2jjx_A 149 --TDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQ---NIQVMDQAALLLARDYNLPAHVF 223 (255)
T ss_dssp --SHHHHHHHHHHHTCSEEEEEESSCCSCBSSCTTTCSSCCBCSEEEHHHHHHT---TCCSSCHHHHHHHHHHTCCEEEE
T ss_pred --hHHHHHHHHHhcCCCEEEEEeCCcCeeECCCCCCCCCCeEeeEecHHHHHHc---CCccCHHHHHHHHHHcCCeEEEE
Confidence 499999999999999999999 999999999999999999999999988775 88999999999999999999999
Q ss_pred eecccc---------CceeEeeCC
Q 020132 203 NIFNLS---------VPGIMICRP 217 (330)
Q Consensus 203 ~~~~~~---------~~GT~I~~~ 217 (330)
|+++|+ ..||.|.++
T Consensus 224 ~~~~~~~l~~~l~g~~~GT~I~~~ 247 (255)
T 2jjx_A 224 NFDEPGVMRRICLGEHVGTLINDD 247 (255)
T ss_dssp ETTSTTHHHHHHBTCCCSEEEESS
T ss_pred eCCCchHHHHHhcCCCCceEEecC
Confidence 998763 579999874
No 8
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=99.87 E-value=4.6e-23 Score=187.66 Aligned_cols=156 Identities=20% Similarity=0.261 Sum_probs=125.8
Q ss_pred ceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCC
Q 020132 37 DFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDN 116 (330)
Q Consensus 37 ~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g 116 (330)
+.+.+.|+.++++++...|.+.|+++.++++.+...+.+ ++.. .+.+ ++++ .|.|||++|+. |
T Consensus 75 ~~~~~~~~~~~~~l~~~~l~~~G~~~~~~~~~~~~~~~~--------~~~~-~~~~-~ll~--~g~ipVv~g~~-----g 137 (239)
T 1ybd_A 75 DYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAE--------TYAR-PKAI-QYLE--EGKVVIFAAGT-----G 137 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEESSCBSSSCE--------ECCH-HHHH-HHHH--TTCEEEEESTT-----S
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeeccccccc--------chhH-HHHH-HHHh--CCcEEEEECCc-----c
Confidence 345566778888889999999999999988766422111 1111 1334 6777 78999998752 2
Q ss_pred CcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcccccccccccceeeecc
Q 020132 117 IPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYD 196 (330)
Q Consensus 117 ~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~a~~~a~~~~ 196 (330)
. .++++|++|+.+|.+|+|++++|||||||||++||+.+|+++++++++++|+.++ |.++|||+|+.+|.++|
T Consensus 138 ~----~~~~~D~~Aa~lA~~l~Ad~liilTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g~~~m~~~a~~~a~~~g 210 (239)
T 1ybd_A 138 N----PFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALLK---NLKVMDATAFALCRERK 210 (239)
T ss_dssp S----TTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHHT---TCCSSCHHHHHHHHHTT
T ss_pred C----CCCCcHHHHHHHHHhcCCCEEEEeeCCCccCCCCCCCCCCCeEccccCHHHHHHh---cccccCHHHHHHHHHcC
Confidence 2 1357899999999999999999999999999999999999999999999998775 78999999999999999
Q ss_pred cceEEeeecccc---------CceeEeeC
Q 020132 197 IPIVIRNIFNLS---------VPGIMICR 216 (330)
Q Consensus 197 i~v~i~~~~~~~---------~~GT~I~~ 216 (330)
+|++|.|+++|+ ..||.|.+
T Consensus 211 v~v~I~~~~~~~~l~~~l~g~~~GT~i~~ 239 (239)
T 1ybd_A 211 LNIVVFGIAKEGSLKRVITGEDEGTLVHC 239 (239)
T ss_dssp CCEEEECTTSTTHHHHHHHTCSCSEEEEC
T ss_pred CcEEEEeCCChhHHHHHHcCCCCCeEEcC
Confidence 999999987652 45888853
No 9
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A*
Probab=99.87 E-value=7.6e-23 Score=184.91 Aligned_cols=148 Identities=18% Similarity=0.226 Sum_probs=122.9
Q ss_pred cccceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecC
Q 020132 34 SFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIAST 113 (330)
Q Consensus 34 ~~~~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~ 113 (330)
...+.+.+.|+.+++.+++..|++.|+++ + .++. ++++++++ .+.|||++| + .
T Consensus 62 ~~~~~~~~~~~~~~~~l~~~~l~~~g~~~-----------~-------~~~~----~~i~~ll~--~g~ipVi~g--g-~ 114 (226)
T 2j4j_A 62 AYLDLLGIWASRLNAYLVMFSLQDLAYMH-----------V-------PQSL----EEFIQDWS--HGKVVVTGG--F-Q 114 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSBCSC-----------C-------CSSH----HHHHHHHT--TSSBEEECC--C-S
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCCCC-----------C-------cCCH----HHHHHHHH--CCCEEEEcC--C-C
Confidence 45667788899999999999999999965 1 1334 77888887 889999998 2 1
Q ss_pred CCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhc-ccc------cccc
Q 020132 114 PDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYF-GAN------VLHP 186 (330)
Q Consensus 114 ~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~-g~~------v~~p 186 (330)
. ++++|++|+.+|.+|+|+++++||||||||++||+.+|+++++++++++|+.+++.. |.. ++|+
T Consensus 115 -----~---~~~~D~~Aa~lA~~l~Ad~liilTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~l~~~~~~~~ggm~~~~k~ 186 (226)
T 2j4j_A 115 -----P---GQSTAAVAALVAEASSSKTLVVATNVDGVYEKDPRIYADVKLIPHLTTQDLRKILEGSQSVQAGTYELLDP 186 (226)
T ss_dssp -----T---TSCHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHHHC----------CCSCH
T ss_pred -----C---CCCcHHHHHHHHHhcCCCEEEEeeccceeeCCCCCCCCCCeEccccCHHHHHHHhhcCCCCcCCccccchH
Confidence 1 356899999999999999999999999999999999999999999999999999644 554 7788
Q ss_pred cccceeeecccceEEeeecccc---------CceeEeeC
Q 020132 187 RTIIPVMRYDIPIVIRNIFNLS---------VPGIMICR 216 (330)
Q Consensus 187 ~a~~~a~~~~i~v~i~~~~~~~---------~~GT~I~~ 216 (330)
+|+.+|.++|+|++|.|+++|+ ..||.|.+
T Consensus 187 ~a~~~a~~~gi~v~I~~~~~~~~l~~~~~g~~~GT~i~~ 225 (226)
T 2j4j_A 187 LAIKIVERSKIRVIVMNYRKLNRIIDILKGEEVSSIIEP 225 (226)
T ss_dssp HHHHHHHHTTCEEEEEEGGGGGGHHHHHTTCSSCEEEEC
T ss_pred HHHHHHHHCCCeEEEEeCCChhHHHHHHcCCCCceEEee
Confidence 9999999999999999987653 45898864
No 10
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=99.86 E-value=6.8e-23 Score=187.76 Aligned_cols=157 Identities=20% Similarity=0.221 Sum_probs=121.2
Q ss_pred cceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCC
Q 020132 36 TDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPD 115 (330)
Q Consensus 36 ~~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~ 115 (330)
.|.+.+.|++++++++...|.+.|+++.++++.+...+++ ......++++++ .|.|||++|+ .
T Consensus 75 ~d~~~~~~~~~~~~ll~~~l~~~G~~~~~~~~~~~~~~~~----------~~~~~~~~~ll~--~g~ipVi~~~-----~ 137 (247)
T 2a1f_A 75 GDHMGMLATVMNGLAMRDSLFRADVNAKLMSAFQLNGICD----------TYNWSEAIKMLR--EKRVVIFSAG-----T 137 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESSCCTTTSE----------ECCHHHHHHHHH--TTCEEEEEST-----T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeEEecccccccccc----------hhhHHHHHHHHh--CCCEEEEeCC-----c
Confidence 3455667788889989999999999999998876421111 012234577887 7899999983 2
Q ss_pred CCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcccccccccccceeeec
Q 020132 116 NIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRY 195 (330)
Q Consensus 116 g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~a~~~a~~~ 195 (330)
|. .++++|++|+.+|.+|+|++++|||||||||++||+.+|+++++++++++|+.++ |.++|+|+|+.+|.++
T Consensus 138 g~----~~~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~dP~~~p~a~~i~~i~~~e~~~~---g~~~m~~~aa~~a~~~ 210 (247)
T 2a1f_A 138 GN----PFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEVIDK---ELKVMDLSAFTLARDH 210 (247)
T ss_dssp SC----SSCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHHHHHHT---TCCSSCHHHHHHHHHH
T ss_pred CC----CCCCcHHHHHHHHHhCCCCEEEEEeCCCcccCCCCCCCCCCeEcccCCHHHHHHc---CccccCHHHHHHHHHc
Confidence 32 2357899999999999999999999999999999999999999999999999875 7899999999999999
Q ss_pred ccceEEeeeccc---------cCceeEeeC
Q 020132 196 DIPIVIRNIFNL---------SVPGIMICR 216 (330)
Q Consensus 196 ~i~v~i~~~~~~---------~~~GT~I~~ 216 (330)
|+|++|.|+++| +..||+|..
T Consensus 211 gv~v~I~~~~~~~~l~~~l~g~~~GT~~~~ 240 (247)
T 2a1f_A 211 GMPIRVFNMGKPGALRQVVTGTEEGTTICE 240 (247)
T ss_dssp TCCEEEEETTSTTHHHHHHTCSCSSEEECC
T ss_pred CCcEEEEeCCCchHHHHHHcCCCCceEEee
Confidence 999999998654 346888853
No 11
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=99.86 E-value=2.1e-22 Score=183.98 Aligned_cols=147 Identities=21% Similarity=0.267 Sum_probs=122.4
Q ss_pred chhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccc
Q 020132 44 ELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKR 123 (330)
Q Consensus 44 E~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgr 123 (330)
..+++.+++..|+++|++++.+++.++...+. ..+. +.+.++++ .+.|||++|+. |.. .
T Consensus 83 ~~~n~~l~~~~l~~~G~~av~lt~~d~~~~~~------~~~~----~~i~~lL~--~g~ipVi~~~~-----g~~----~ 141 (240)
T 4a7w_A 83 TVINAVAMQEALEHIGLDTRVQSAIEIKEICE------SYIY----RKAIRHLE--KGRVVIFGAGT-----GNP----F 141 (240)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESSCCTTTSE------ECCH----HHHHHHHH--TTCEEEEESTT-----SCT----T
T ss_pred HHHHHHHHHHHHHHCCCCEEEecHHHcCcccC------cCcH----HHHHHHHH--CCCEEEEeCCC-----CCC----C
Confidence 56788888899999999999998877632110 1233 66788888 88999999842 322 1
Q ss_pred cCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcccccccccccceeeecccceEEee
Q 020132 124 DGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRN 203 (330)
Q Consensus 124 ggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~a~~~a~~~~i~v~i~~ 203 (330)
+.+|++|+.+|.+|+|+++++||||||||++||+.+|+++++++++++|+.++ |.++|+++|+.+|.++|+|++|.|
T Consensus 142 ~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g~~~m~~~a~~~a~~~gv~v~I~~ 218 (240)
T 4a7w_A 142 FTTDTAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDALIG---DIEVMDDTAISLAKDNKLPIVVCN 218 (240)
T ss_dssp SCHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEECHHHHHHS---SCCSSCHHHHHHHHHTTCCEEEEE
T ss_pred CChHHHHHHHHHHcCCCEEEEccCCCceECCCCCCCCCCeEcceecHHHHHhc---CccccHHHHHHHHHHCCCeEEEEC
Confidence 35799999999999999999999999999999999999999999999998764 789999999999999999999999
Q ss_pred ecccc----------CceeEe
Q 020132 204 IFNLS----------VPGIMI 214 (330)
Q Consensus 204 ~~~~~----------~~GT~I 214 (330)
++.|+ ..||.|
T Consensus 219 g~~~~~l~~~l~g~~g~GT~i 239 (240)
T 4a7w_A 219 MFKKGNLLQVIKHQQGVFSMV 239 (240)
T ss_dssp SSSTTHHHHHHHHSCSSCEEE
T ss_pred CCCccHHHHHHCCCCCCceee
Confidence 97653 357876
No 12
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=99.85 E-value=5.6e-22 Score=181.46 Aligned_cols=148 Identities=23% Similarity=0.254 Sum_probs=122.4
Q ss_pred hhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCccccccc
Q 020132 45 LWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRD 124 (330)
Q Consensus 45 ~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrg 124 (330)
++++.++...|.+.|++++.+++.++...++ .+ ..+.+..+++ .|.|||++|+ .|.. ++
T Consensus 85 ~~N~~~l~~al~~~G~~a~~~~~~~~~~v~~------~~----~~~~~~~lL~--~g~IpVv~~~-----~g~~----~~ 143 (243)
T 3ek6_A 85 VINALAMQDALEKLGAKVRVMSAIKINDVCE------DF----IRRRAIRHLE--KGRIAIFAAG-----TGNP----FF 143 (243)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESSCBTTTBE------EC----CHHHHHHHHH--TTCEEEEEST-----TSST----TC
T ss_pred HHHHHHHHHHHHHcCCCeEEechhhcCcccC------cC----CHHHHHHHHH--CCcEEEEECC-----CCCC----cC
Confidence 3446679999999999999999887532111 12 2367788888 8999999984 2322 25
Q ss_pred CcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcccccccccccceeeecccceEEeee
Q 020132 125 GSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNI 204 (330)
Q Consensus 125 gsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~a~~~a~~~~i~v~i~~~ 204 (330)
++|++|+.+|.+|+|+++++||||||||++||+.+|+|+++++++++|+.+ .|.++|+++|++.|.++|+|++|.|+
T Consensus 144 ~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~---~g~~~~~~~a~~~a~~~gv~v~I~~g 220 (243)
T 3ek6_A 144 TTDSGAALRAIEIGADLLLKATKVDGVYDKDPKKHSDAVRYDSLTYDEVIM---QGLEVMDTAAFALARDSDLPLRIFGM 220 (243)
T ss_dssp CHHHHHHHHHHHHTCSEEEEECSSSSCBSSCGGGCTTCCBCSEECHHHHHH---HTCCSSCHHHHHHHHHTTCCEEEECC
T ss_pred ChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceecccccHHHHHh---CCchhHHHHHHHHHHHCCCeEEEEcC
Confidence 689999999999999999999999999999999999999999999998876 37889999999999999999999999
Q ss_pred ccc---------cCceeEeeC
Q 020132 205 FNL---------SVPGIMICR 216 (330)
Q Consensus 205 ~~~---------~~~GT~I~~ 216 (330)
++| +..||+|.+
T Consensus 221 ~~~~~l~~~l~g~~~GT~i~~ 241 (243)
T 3ek6_A 221 SEPGVLLRILHGAQIGTLVQG 241 (243)
T ss_dssp CSTTHHHHHHTTCCCSEEECC
T ss_pred CCccHHHHHHCCCCCceEEee
Confidence 754 346999875
No 13
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=99.85 E-value=6.6e-22 Score=191.02 Aligned_cols=168 Identities=16% Similarity=0.229 Sum_probs=102.2
Q ss_pred cceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCC
Q 020132 36 TDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPD 115 (330)
Q Consensus 36 ~~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~ 115 (330)
.+.+.+.|+..+++.+...|.+.|+++. ++.+ +.+.+.. +..+....+.++++++ .|.|||+.+.
T Consensus 72 ~qa~aavGq~~l~~~~~~~l~~~G~~~~-----qvll-t~~d~~~-~~r~~n~~~~i~~LL~--~g~IPIv~en------ 136 (367)
T 2j5v_A 72 KQLLAAVGQSRLIQLWEQLFSIYGIHVG-----QMLL-TRADMED-RERFLNARDTLRALLD--NNVVPVINEN------ 136 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCCEE-----EEEE-CGGGGSS-HHHHHHHHHHHHHHHH--TTCEEEEEEC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCceE-----EEEE-ecccccC-ceEEEhHHHHHHHHHH--CCCEEEECCC------
Confidence 3345678898899999999999999885 3433 3332321 1122233477888888 7999999642
Q ss_pred CCccc--ccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhh--HHhhhhhh-----cccccccc
Q 020132 116 NIPTT--LKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSY--QEAWEMSY-----FGANVLHP 186 (330)
Q Consensus 116 g~~~~--lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~--~e~~~l~~-----~g~~v~~p 186 (330)
+.+.+ +.+|++|++|+.+|.+++|+.++|||||||||++||+.+|++++++++++ +|+.+++. +|.++|+|
T Consensus 137 d~v~~~el~~gd~D~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~i~~~~~e~~~l~~~~~s~~gtGgM~~ 216 (367)
T 2j5v_A 137 DAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMST 216 (367)
T ss_dssp TTSCCGGGCCCSHHHHHHHHHHHHTCSEEEEEECC------------------------------------------CHH
T ss_pred CceecccccCCCHHHHHHHHHHhcCCCEEEEeecCCceECCCCCCCCCCeEeeeeCCCHHHHHHHhhccCCCcCcCccHH
Confidence 23333 66889999999999999999999999999999999999999999999999 89998875 47789999
Q ss_pred --cccceeeecccceEEeeecccc---------CceeEeeCCC
Q 020132 187 --RTIIPVMRYDIPIVIRNIFNLS---------VPGIMICRPP 218 (330)
Q Consensus 187 --~a~~~a~~~~i~v~i~~~~~~~---------~~GT~I~~~~ 218 (330)
.|+..|.++|+|++|.|+++|+ ..||+|.+..
T Consensus 217 Kl~Aa~~a~~~Gv~v~I~~g~~~~~L~~~l~g~~~GT~i~~~~ 259 (367)
T 2j5v_A 217 KLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQA 259 (367)
T ss_dssp HHHHHHHHHHTTCEEEEEETTSTTHHHHHHHTCCCSEEECCCS
T ss_pred HHHHHHHHHHcCCCEEEEcCCCchHHHHHhcCCCCcEEEEcCc
Confidence 6899999999999999998764 6799997653
No 14
>3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.84 E-value=7.5e-22 Score=183.18 Aligned_cols=155 Identities=16% Similarity=0.169 Sum_probs=119.5
Q ss_pred HHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCC--CCcccccccCcc
Q 020132 50 MLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPD--NIPTTLKRDGSD 127 (330)
Q Consensus 50 ~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~--g~~~~lgrggsD 127 (330)
.+++.|+++|++|+.+++.+..+++.++. ..++. +.++.+++ .+.|||++||++.+.+ |+++++ ++|
T Consensus 93 ~l~~~L~~~G~~a~~l~g~~~~~~~~g~v--~~v~~----~~i~~lL~--~g~ipVi~~~~~~~~~~~g~~~~~---~~D 161 (269)
T 3ll9_A 93 HVCDALLAEGIPAVSMQPSAFIRAHAGRI--SHADI----SLIRSYLE--EGMVPVVYGDVVLDSDRRLKFSVI---SGD 161 (269)
T ss_dssp HHHHHHHHTTCCEEECCGGGTEEEETTEE--EEECC----HHHHHHHH--TTCEEEEECEEEEBSCTTTSEEEE---CHH
T ss_pred HHHHHHHHCCCcEEEEcchHcCeEecCee--eeecH----HHHHHHHH--CCCEEEECCCEEecccccCcceec---chH
Confidence 47889999999999999998876654321 23455 88899998 8999999999998888 888776 589
Q ss_pred hhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhh-----ccccccccc--ccceeeecccceE
Q 020132 128 FSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSY-----FGANVLHPR--TIIPVMRYDIPIV 200 (330)
Q Consensus 128 ~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~-----~g~~v~~p~--a~~~a~~~~i~v~ 200 (330)
++|+.+|.+|+|+++++||||||||++||+.+|++++++++++.|+.++.. .+..+|.|+ ++..|.++|++++
T Consensus 162 ~~Aa~lA~~l~Ad~li~ltdv~Gv~~~dp~~~~~a~~i~~i~~~e~~~~l~~~~~~~~tgGM~~Kl~aa~~a~~~Gv~v~ 241 (269)
T 3ll9_A 162 QLINHFSLRLMPERVILGTDVDGVYTRNPKKHPDARLLDVIGSLDDLESLDGTLNTDVTGGMVGKIRELLLLAEKGVESE 241 (269)
T ss_dssp HHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCSBCCC-------------------SHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCCeEEEecCCCEEEcCCCCcCCcceEccccCHHHHHHHhcccCCCcCcCCcHHHHHHHHHHHhCCCeEE
Confidence 999999999999999999999999999999999999999999999977753 345788884 5666667899999
Q ss_pred Eeeeccc---------cCc-eeEee
Q 020132 201 IRNIFNL---------SVP-GIMIC 215 (330)
Q Consensus 201 i~~~~~~---------~~~-GT~I~ 215 (330)
|.|+..| +.. ||.|.
T Consensus 242 I~~g~~~~~l~~~~~g~~~~GT~i~ 266 (269)
T 3ll9_A 242 IINAAVPGNIERALLGEEVRGTRIT 266 (269)
T ss_dssp EEESSSTTHHHHHHHTCCCSSEEC-
T ss_pred EEeCCCchHHHHHHCCCCCCcEEEE
Confidence 9998654 344 88875
No 15
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=99.84 E-value=3.6e-22 Score=187.91 Aligned_cols=168 Identities=14% Similarity=0.198 Sum_probs=133.3
Q ss_pred eeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCC-C---CCCc-------hhhHHHHHHhhccCCCccEEEe
Q 020132 39 VVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQ-V---DPDF-------SESEKRLEKWFSQSPSNTIIAT 107 (330)
Q Consensus 39 v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~-~---~~~~-------~~~~~~i~~~l~~~~~~VpVv~ 107 (330)
.++.|+. +. .+...|.+.|++++++++.+..+++....+- . .+|+ ....+.++++++ .|.|||++
T Consensus 100 ~~~~G~l-~~-~l~~~L~~~g~~av~lt~~d~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~--~g~IpVv~ 175 (299)
T 2ap9_A 100 MVLFGQV-GR-ELVNLINAHGPYAVGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVA--AGRIPVVS 175 (299)
T ss_dssp HHHHHTH-HH-HHHHHHTTSSSCEEEEETTGGGCEEEEECCBCSSSCCBCCBSEEEEEEECHHHHHHHHH--TTCEEEEE
T ss_pred HHHhhHH-HH-HHHHHHHhCCCCceEechhHCCEEEEEecccccccccCCCCcceeEEEecHHHHHHHHh--CCCeEEEC
Confidence 3446874 33 4799999999999999988742222111110 0 0110 012378888998 89999999
Q ss_pred eeeecCCCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhccccccccc
Q 020132 108 GFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPR 187 (330)
Q Consensus 108 G~i~~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~ 187 (330)
|+ +.++.|+.+++ ++|++|+.+|.+|+|++++|||||||||++||+ +++++++++++|+.+++.++.++|+|+
T Consensus 176 ~v-~~~~~G~~~~l---~~D~~Aa~lA~~l~Ad~liilTDVdGV~~~dP~---~~~~i~~is~~e~~~l~~~~~ggM~~K 248 (299)
T 2ap9_A 176 TL-APDADGVVHNI---NADTAAAAVAEALGAEKLLMLTDIDGLYTRWPD---RDSLVSEIDTGTLAQLLPTLELGMVPK 248 (299)
T ss_dssp SE-EECTTCCEEEE---CHHHHHHHHHHHTTCSEEEEEESSSSEETTTTC---TTCEESEEEHHHHHHHGGGSCTTTHHH
T ss_pred Ce-eECCCCCEEEE---CHHHHHHHHHHHcCCCEEEEEeCChhhhcCCCC---CCcChhhcCHHHHHHHHHhhcCchHHH
Confidence 98 88888988877 589999999999999999999999999999998 478999999999999998899999996
Q ss_pred --ccceeeecccc-eEEeeecccc----------CceeEeeCC
Q 020132 188 --TIIPVMRYDIP-IVIRNIFNLS----------VPGIMICRP 217 (330)
Q Consensus 188 --a~~~a~~~~i~-v~i~~~~~~~----------~~GT~I~~~ 217 (330)
|+..|.++|+| ++|.|+..|+ ..||.|.+.
T Consensus 249 l~aa~~a~~~gv~~v~I~~g~~p~~ll~~l~~~~~~GT~i~~~ 291 (299)
T 2ap9_A 249 VEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRG 291 (299)
T ss_dssp HHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCcEEEecC
Confidence 88888899999 9999986553 358999764
No 16
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=99.84 E-value=7.7e-22 Score=181.29 Aligned_cols=154 Identities=21% Similarity=0.252 Sum_probs=124.9
Q ss_pred eccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCccc
Q 020132 41 GHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTT 120 (330)
Q Consensus 41 ~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~ 120 (330)
+.++.++++++...|.+.|++++.+.+.+...+.+ . + ....++++++ .|.|||++|+ .|.
T Consensus 79 ~~~~~~~~~ll~~al~~~G~~~~~~~~~~~~~~~~-----~---~--~~~~~~~lL~--~g~IpVi~~~-----~g~--- 138 (252)
T 1z9d_A 79 MLGTVMNALVMADSLQHYGVDTRVQTAIPMQNVAE-----P---Y--IRGRALRHLE--KNRIVVFGAG-----IGS--- 138 (252)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEESSCBTTTBE-----E---C--CHHHHHHHHH--TTCEEEEEST-----TSC---
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEeccccccccC-----c---c--hHHHHHHHHh--CCCEEEEeCC-----cCC---
Confidence 34556677779999999999999988765421111 0 1 2234477887 7899999983 132
Q ss_pred ccccCcchhHHHHHHHHhhceeEEEe-ecccccccCccchhHhhhhhhhhhHHhhhhhhcccccccccccceeeecccce
Q 020132 121 LKRDGSDFSAAIMGALLRAHQVTIWT-DVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPI 199 (330)
Q Consensus 121 lgrggsD~~A~~lA~~l~A~~l~~~t-dv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~a~~~a~~~~i~v 199 (330)
.++++|++|+.+|.+|+|++++||| ||||||++||+.+|+++++++++++|+.+ .|.++|+++|+..|.++|+|+
T Consensus 139 -~~~~~D~~Aa~lA~~l~Ad~LiilT~DVdGvy~~dP~~~~~a~~i~~i~~~e~~~---~~~~~mk~~aa~~a~~~gv~v 214 (252)
T 1z9d_A 139 -PYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIK---RGLKIMDATASTLSMDNDIDL 214 (252)
T ss_dssp -TTCCHHHHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHT---TTCCCSCHHHHHHHHHTTCEE
T ss_pred -CCCChHHHHHHHHHhcCCCEEEEecCCCCeeeCCCCCCCCCCeEeeEecHHHHHh---ccccccCHHHHHHHHHcCCeE
Confidence 2467999999999999999999999 99999999999999999999999999876 477899999999999999999
Q ss_pred EEeeecccc---------CceeEeeCCC
Q 020132 200 VIRNIFNLS---------VPGIMICRPP 218 (330)
Q Consensus 200 ~i~~~~~~~---------~~GT~I~~~~ 218 (330)
+|.|+.+|+ ..||+|.+..
T Consensus 215 ~I~~g~~~~~l~~~l~g~~~GT~i~~~~ 242 (252)
T 1z9d_A 215 VVFNMNEAGNIQRVVFGEHIGTTVSNKV 242 (252)
T ss_dssp EEEETTSTTHHHHHHTTCCCSEEEECC-
T ss_pred EEEeCCCchHHHHHHcCCCCceEEecCC
Confidence 999997663 5799998754
No 17
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=99.83 E-value=1.6e-21 Score=181.69 Aligned_cols=126 Identities=19% Similarity=0.246 Sum_probs=105.1
Q ss_pred hHHHHHHhhccCCCccEEEeeeeecCCCCCc-ccccccCcchhHHHHHHHHhhceeEEEeecccccccCcc--chhHhhh
Q 020132 88 SEKRLEKWFSQSPSNTIIATGFIASTPDNIP-TTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPR--KVSEAVI 164 (330)
Q Consensus 88 ~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~-~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~--~~~~a~~ 164 (330)
..+.++.+++ .|.|||++||.+.+.++.+ ..+.++++|++|+.+|.+|+|+++++||||||||++||+ .+|++++
T Consensus 133 ~~~~i~~lL~--~g~IpVi~~~~~~~~~e~~G~~~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGvy~~dP~~~~~~~a~~ 210 (276)
T 2ogx_A 133 VADQLAIHLS--ATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQARF 210 (276)
T ss_dssp HHHHHHHHHH--HSSEEEEESSCTTGGGCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCTTSTTGGGCCE
T ss_pred hHHHHHHHHh--CCCEEEEcCCcccccccccCCcCCCCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCccCCCCCeE
Confidence 3477888888 7899999998776632210 112346799999999999999999999999999999999 8999999
Q ss_pred hhhhhhHHhhhhhhcccccccccccceee--ecccceEEeeeccc---------cCceeEeeCC
Q 020132 165 LRTLSYQEAWEMSYFGANVLHPRTIIPVM--RYDIPIVIRNIFNL---------SVPGIMICRP 217 (330)
Q Consensus 165 i~~is~~e~~~l~~~g~~v~~p~a~~~a~--~~~i~v~i~~~~~~---------~~~GT~I~~~ 217 (330)
+++++++|+.+++ |.++|+|++...+. +++++++|.|+..| +..||.|.+.
T Consensus 211 i~~i~~~e~~~~~--g~ggM~~K~~~~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 272 (276)
T 2ogx_A 211 LPETSATDLAKSE--GPLPVDRALLDVMATARHIERVQVVNGLVPGRLTAALRGEHVGTLIRTG 272 (276)
T ss_dssp ESEEEHHHHHTSC--SCCSSCHHHHHHHHTCSSCCEEEEEETTSTTHHHHHHTTCCCSEEEECS
T ss_pred cceeCHHHHHHHh--CcCChHHHHHHHHHHhcCCCeEEEEECCCccHHHHHHcCCCCceEEccC
Confidence 9999999999987 88999999877777 56889999998766 4579999764
No 18
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=99.82 E-value=2.6e-21 Score=177.03 Aligned_cols=148 Identities=24% Similarity=0.286 Sum_probs=120.6
Q ss_pred cccceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecC
Q 020132 34 SFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIAST 113 (330)
Q Consensus 34 ~~~~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~ 113 (330)
...+.+.+.|+.+++.++...|.+.|+++ + .++. +.+.++++ .+.|||++|
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~l~~~g~~~------------~------~~~~----~~i~~lL~--~g~IpVi~g----- 132 (244)
T 2brx_A 82 TFKDFIGIQITRANAMLLIAALREKAYPV------------V------VEDF----WEAWKAVQ--LKKIPVMGG----- 132 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGBCSS------------C------BCSH----HHHHHHHH--TTCBCEECC-----
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCCCC------------C------cCCH----HHHHHHHh--CCCEEEEcC-----
Confidence 44556677788899999888999999754 0 1233 66788888 899999998
Q ss_pred CCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhc-cc-----cccccc
Q 020132 114 PDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYF-GA-----NVLHPR 187 (330)
Q Consensus 114 ~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~-g~-----~v~~p~ 187 (330)
|.. ++++|++|+.+|.+|+|++++|||||||||++||+++|+++++++++++|+.+++.. |. .++++.
T Consensus 133 --g~~----~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~a~~i~~i~~~e~~~~~~~~g~~~g~m~~~~~~ 206 (244)
T 2brx_A 133 --THP----GHTTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKGIEKAGSSSVIDPL 206 (244)
T ss_dssp --CST----TCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC--------CCSCHH
T ss_pred --CCC----CCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeeEECHHHHHHHHhccCCCCCCCcchHHH
Confidence 222 246799999999999999999999999999999999999999999999999998643 43 678889
Q ss_pred ccceeeecccceEEeeeccc---------cCceeEeeC
Q 020132 188 TIIPVMRYDIPIVIRNIFNL---------SVPGIMICR 216 (330)
Q Consensus 188 a~~~a~~~~i~v~i~~~~~~---------~~~GT~I~~ 216 (330)
|++.+.+.+++++|.|+++| +..||.|.+
T Consensus 207 A~~~~~~~~~~v~I~ng~~~~~l~~~l~g~~~GT~i~~ 244 (244)
T 2brx_A 207 AAKIIARSGIKTIVIGKEDAKDLFRVIKGDHNGTTIEP 244 (244)
T ss_dssp HHHHHHHHTCCEEEECHHHHTCHHHHHTTCSSSEEECC
T ss_pred HHHHHHHCCCeEEEEeCCChhHHHHHHcCCCCceEecC
Confidence 99999999999999998654 245888853
No 19
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=99.81 E-value=2.3e-20 Score=171.92 Aligned_cols=147 Identities=15% Similarity=0.183 Sum_probs=109.9
Q ss_pred hhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCccccccc
Q 020132 45 LWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRD 124 (330)
Q Consensus 45 ~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrg 124 (330)
.++++++...|.+.|++++.+.+.+. +.+.+. .....+..+++ .|.|||++|. .|. .++
T Consensus 99 ~~n~~l~~~~l~~~Gi~a~~~~~~t~-----~~~~~~-----~~~~~~~~lL~--~g~IpVi~~~-----~g~----~~~ 157 (256)
T 2va1_A 99 IINGLALENALNHLNVNTIVLSAIKC-----DKLVHE-----SSANNIKKAIE--KEQVMIFVAG-----TGF----PYF 157 (256)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEESSCC-----TTTCEE-----CCHHHHHHHHH--TTCEEEEEST-----TSS----SSC
T ss_pred HHHHHHHHHHHHHcCCCeEEEeeeec-----ccccch-----hhHHHHHHHHh--CCcEEEEECC-----CCC----CCC
Confidence 55566779999999999987765532 112111 12233467887 8999999982 232 246
Q ss_pred CcchhHHHHHHHHhhceeEEEee-cccccccCccchhHhhhhhhhhhHHhhhhhhcccccccccccceeeecccceEEee
Q 020132 125 GSDFSAAIMGALLRAHQVTIWTD-VDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRN 203 (330)
Q Consensus 125 gsD~~A~~lA~~l~A~~l~~~td-v~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~a~~~a~~~~i~v~i~~ 203 (330)
++|++|+.+|.+|+|++++++|| |||||++||+++|+++++++++++|+.++ +.++|+++|+..|.++|+|++|.|
T Consensus 158 ~~D~~Aa~lA~~l~Ad~LiilTD~VdGVy~~dP~~~p~a~~i~~is~~e~~~~---~~~~mk~~aa~~a~~~gv~v~I~~ 234 (256)
T 2va1_A 158 TTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQ---NLKVMDATALALCQENNINLLVFN 234 (256)
T ss_dssp CHHHHHHHHHHHHTCSEEEEEESSCCSBCSCC--------CBSEEEHHHHHHH---TCCSSCHHHHHHHHHTTCEEEEEE
T ss_pred ChhHHHHHHHHhCCCCEEEEeecccCeEEcCCCCCCCCCEEccEEcHHHHHHh---ccCCccHHHHHHHHHCCCeEEEEe
Confidence 78999999999999999999999 99999999999999999999999999887 457889999999999999999999
Q ss_pred eccc---------cCceeEee
Q 020132 204 IFNL---------SVPGIMIC 215 (330)
Q Consensus 204 ~~~~---------~~~GT~I~ 215 (330)
+.+| +..||.|.
T Consensus 235 g~~~~~l~~~l~g~~~GT~i~ 255 (256)
T 2va1_A 235 IDKPNAIVDVLEKKNKYTIVS 255 (256)
T ss_dssp SSSTTHHHHHHTTCSCEEEEE
T ss_pred CCCchHHHHHHcCCCCeEEEe
Confidence 8754 24588875
No 20
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3
Probab=99.81 E-value=3.6e-21 Score=176.57 Aligned_cols=158 Identities=13% Similarity=0.148 Sum_probs=117.5
Q ss_pred ceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCC
Q 020132 37 DFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDN 116 (330)
Q Consensus 37 ~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g 116 (330)
+.+.+.|+....+.+...|.+.|+++.. + ..+.+.+.. +..+....+.++.+++ .|.|||++|+-+.. .+
T Consensus 66 ~~l~~~~q~~l~~~~~~~l~~~G~~~~~-----i-~~~~~~~~~-~~~~~~~~~~i~~ll~--~g~ipVi~~~d~v~-~~ 135 (251)
T 2ako_A 66 QVLAAIGQPFLISVYNELLAKFNKLGGQ-----I-LLTGKDFDS-RKATKHAKNAIDMMIN--LGILPIINENDATA-IE 135 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCCEEE-----E-EECTGGGGC-HHHHHHHHHHHHHHHH--TTCEEEEEECTTTC-CH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcEEE-----E-EeccchhcC-cceEehHHHHHHHHHH--CCCEEEEeCCCcee-ec
Confidence 3455667778888899999999998763 3 233322211 0111123367888888 89999999751111 11
Q ss_pred CcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhH--Hhhhhhh-----cccccccc--c
Q 020132 117 IPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQ--EAWEMSY-----FGANVLHP--R 187 (330)
Q Consensus 117 ~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~--e~~~l~~-----~g~~v~~p--~ 187 (330)
+. .++++|++|+.+|.+|+|+++++||||||||++||+++|++++++++++. |+.+++. +|.++|.| +
T Consensus 136 ~~---~~~~~D~~Aa~lA~~l~Ad~liilTdVdGVy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~~~~~~~~ggm~~k~~ 212 (251)
T 2ako_A 136 EI---VFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLK 212 (251)
T ss_dssp HH---HBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC---------CBSCHHHHHHH
T ss_pred ce---eecCchHHHHHHHHhcCCCEEEEEeCCCceeeCCCCCCCCCeEeeEeccchHHHHHHhcccCCCCccCchHHHHH
Confidence 11 35789999999999999999999999999999999999999999999998 9999875 56787876 5
Q ss_pred ccceeeecccceEEeeeccc
Q 020132 188 TIIPVMRYDIPIVIRNIFNL 207 (330)
Q Consensus 188 a~~~a~~~~i~v~i~~~~~~ 207 (330)
|+..|.++|+|++|.|+.+|
T Consensus 213 aa~~a~~~gv~v~I~~g~~~ 232 (251)
T 2ako_A 213 AAKFLLEHNKKMFLASGFDL 232 (251)
T ss_dssp HHHHHHHTTCEEEEEESSSC
T ss_pred HHHHHHHCCCeEEEEeCCCh
Confidence 88999999999999987654
No 21
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=99.80 E-value=4.5e-21 Score=179.42 Aligned_cols=155 Identities=13% Similarity=0.040 Sum_probs=121.8
Q ss_pred eeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCc
Q 020132 39 VVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIP 118 (330)
Q Consensus 39 v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~ 118 (330)
.++.|+......+...|.++|+++..+.+.+..++.+ |...++. +.++.+++ .|.|||++||++.+.+|++
T Consensus 94 ~~~vt~g~l~~~l~~~l~~~G~~a~~l~~~~~~~t~d---g~~~~~~----~~i~~lL~--~g~IpVi~gd~~~~~~g~~ 164 (286)
T 3d40_A 94 GLTEATFEVKKRWAEKLRGIGVDAFPLQLAAMCTLRN---GIPQLRS----EVLRDVLD--HGALPVLAGDALFDEHGKL 164 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEECCGGGTEEEET---TEEEECC----SHHHHHHH--TTCEEEEECEEEEBTTSCE
T ss_pred cchhhHHHHHHHHHHHHHHcCCcEEEEEeecCCcccC---CeEEehH----HHHHHHHH--CcCEEEEcCCeEEcCCCCE
Confidence 3455555567788999999999999998866553222 1122334 67888888 8999999998898888874
Q ss_pred ccccccCcchhHHHHHHH-HhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhh--------cccccccc--c
Q 020132 119 TTLKRDGSDFSAAIMGAL-LRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSY--------FGANVLHP--R 187 (330)
Q Consensus 119 ~~lgrggsD~~A~~lA~~-l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~--------~g~~v~~p--~ 187 (330)
.++++|++|+.+|.+ |+|++++|+|||||||++||+ ++++++++++.|+.++.. ++.++|+| +
T Consensus 165 ---~~~~~D~~Aa~lA~~~l~Ad~LiilTDVdGVy~~dP~---~a~~i~~is~~e~~~l~~~~~~~~~~~~tggM~~Kl~ 238 (286)
T 3d40_A 165 ---WAFSSDRVPEVLLPMVEGRLRVVTLTDVDGIVTDGAG---GDTILPEVDARSPEQAYAALWGSSEWDATGAMHTKLD 238 (286)
T ss_dssp ---EEECGGGHHHHTTTTCCSCEEEEEEESSSSCEECC------CEECCEEETTSCHHHHHHHHHSCC----CHHHHHHH
T ss_pred ---EeeCHHHHHHHHHHhhCCCCEEEEecCCCeeEcCCCC---CCcCCcccCHHHHHHHHHhhccccCCcccCcHHHHHH
Confidence 456799999999999 999999999999999999999 799999999998777743 35689998 5
Q ss_pred ccceeeecccceEEeeecccc
Q 020132 188 TIIPVMRYDIPIVIRNIFNLS 208 (330)
Q Consensus 188 a~~~a~~~~i~v~i~~~~~~~ 208 (330)
|+..|.++|+|++|.|+..|+
T Consensus 239 Aa~~a~~~gv~v~I~~g~~p~ 259 (286)
T 3d40_A 239 ALVTCARRGAECFIMRGDPGS 259 (286)
T ss_dssp HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHCCCcEEEEeCCCCC
Confidence 888899999999999987654
No 22
>2egx_A Putative acetylglutamate kinase; struc genomics, NPPSFA, national project on protein structural AN functional analyses; 1.92A {Thermus thermophilus} PDB: 3u6u_A
Probab=99.80 E-value=1.2e-20 Score=174.86 Aligned_cols=167 Identities=13% Similarity=0.124 Sum_probs=125.8
Q ss_pred cceeeec--cchhHHHHHHHHHHhcCCccccccceeEEEECCCC----------------CCC-CCCCchhhHHHHHHhh
Q 020132 36 TDFVVGH--GELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTS----------------SNQ-VDPDFSESEKRLEKWF 96 (330)
Q Consensus 36 ~~~v~~~--GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~----------------~g~-~~~~~~~~~~~i~~~l 96 (330)
.+.+.+. |+. ...+...|.++|++++.+++.+..+++... +|. .++.... .+.++.++
T Consensus 71 l~~~~~~~~G~i--~~~l~~~l~~~G~~a~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~D~g~~g~i~~v~-~~~i~~ll 147 (269)
T 2egx_A 71 LEIFEMVYCGLV--NKRLVELLQKEGANAIGLSGLDGRLFVGRRKTAVKYVENGKVKVHRGDYTGTVEEVN-KALLDLLL 147 (269)
T ss_dssp HHHHHHHHHTHH--HHHHHHHHHHTTCCEEEEETTGGGCEEECBC----------------CCEECCCEEC-HHHHHHHH
T ss_pred HHHHHHHHHhHH--HHHHHHHHHHCCCCeEEeCCCCccceeeeecccccccccccccCCcCCCCCCceEEC-HHHHHHHH
Confidence 3444444 566 788899999999999999887732222111 111 1111111 37888889
Q ss_pred ccCCCccEEEeeeeecCCCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhh--
Q 020132 97 SQSPSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAW-- 174 (330)
Q Consensus 97 ~~~~~~VpVv~G~i~~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~-- 174 (330)
+ .|.|||+++ ++.+.+|+++ ++++|++|+.+|.+|+|+++++||||||||+ ||+ |+++++++++++|+.
T Consensus 148 ~--~g~ipVi~~-v~~~~~g~~~---~~~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~-dp~--~~a~~i~~i~~~e~~~~ 218 (269)
T 2egx_A 148 Q--AGYLPVLTP-PALSYENEAI---NTDGDQIAALLATLYGAEALVYLSNVPGLLA-RYP--DEASLVREIPVERIEDP 218 (269)
T ss_dssp H--TTCEEEEEC-CEEETTSCEE---EECHHHHHHHHHHHHTCSEEEEEESSSSCBC---------CBCCEECHHHHHCH
T ss_pred H--CCCEEEEcC-cEECCCCCEE---EeCHHHHHHHHHHHcCCCEEEEEeCchhhhc-CCC--CCccccccCCHHHhhHH
Confidence 8 899999996 5778888865 3579999999999999999999999999999 993 789999999999999
Q ss_pred hhhhcccccccc--cccceeeeccc-ceEEeeecccc-------CceeEe
Q 020132 175 EMSYFGANVLHP--RTIIPVMRYDI-PIVIRNIFNLS-------VPGIMI 214 (330)
Q Consensus 175 ~l~~~g~~v~~p--~a~~~a~~~~i-~v~i~~~~~~~-------~~GT~I 214 (330)
++..++.++|+| +|+..|.++|+ +++|.|+..|+ ..||.|
T Consensus 219 ~l~~~~~ggm~~Kl~aa~~a~~~gv~~v~I~~g~~~~~l~~~l~g~GT~i 268 (269)
T 2egx_A 219 EYLALAQGRMKRKVMGAVEAVKGGVKRVVFADGRVENPIRRALSGEGTVV 268 (269)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHTTCSCEEEEESSSSSHHHHHHTTCSEEE
T ss_pred HhcCCCCCchHHHHHHHHHHHHcCCCeEEEEeCCCchHHHHHhCCCCeEE
Confidence 997778899999 58889999999 89999987764 358877
No 23
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=99.80 E-value=1.2e-20 Score=175.92 Aligned_cols=154 Identities=21% Similarity=0.256 Sum_probs=116.9
Q ss_pred eeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCC
Q 020132 38 FVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNI 117 (330)
Q Consensus 38 ~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~ 117 (330)
++-..++.+++.++...|.+.|++++.+.+.+...+++ .| .+ .+.+ ++|+ .|.|||+.|+ .|.
T Consensus 118 ~~g~lat~~n~~~l~~~L~~~Gi~a~~~~~~~~~~~~~-~~----~~----~~~l-~lL~--~g~IpVv~g~-----~g~ 180 (281)
T 3nwy_A 118 YMGMLGTVMNSLALQDFLEKEGIVTRVQTAITMGQVAE-PY----LP----LRAV-RHLE--KGRVVIFGAG-----MGL 180 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEESSCCGGGSE-EC----CH----HHHH-HHHH--TTCEEEEEST-----TSS
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEeccccccccc-cc----ch----HHHH-HHHH--cCCeEEEECC-----CCC
Confidence 33345678888899999999999997665554322221 11 11 1334 6777 8999999984 232
Q ss_pred cccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcccccccccccceeeeccc
Q 020132 118 PTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDI 197 (330)
Q Consensus 118 ~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p~a~~~a~~~~i 197 (330)
. ++++|++|+++|.+|+|+.+++||||||||++||+++|+|+++++++++|+.+ .|..+|+++|+..|.++|+
T Consensus 181 ~----~~~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~A~~i~~is~~e~~~---~g~~v~k~~Aa~~a~~~Gi 253 (281)
T 3nwy_A 181 P----YFSTDTTAAQRALEIGADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHREVLD---RGLRVADATAFSLCMDNGM 253 (281)
T ss_dssp T----TCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-----CCCCBCSEECHHHHHT---TTCCSSCHHHHHHHHTTTC
T ss_pred C----CCCHHHHHHHHHHHcCCCEEEEeeccCccccCCCCcCCCCeEcccccHHHHHH---cCCCcHHHHHHHHHHHCCC
Confidence 2 25689999999999999999999999999999999999999999999998754 4788999999999999999
Q ss_pred ceEEeeeccc---------cCceeEee
Q 020132 198 PIVIRNIFNL---------SVPGIMIC 215 (330)
Q Consensus 198 ~v~i~~~~~~---------~~~GT~I~ 215 (330)
|++|.|+++| +..||+|.
T Consensus 254 ~v~I~~g~~p~~l~~~l~Ge~~GT~i~ 280 (281)
T 3nwy_A 254 PILVFNLLTDGNIARAVRGEKIGTLVT 280 (281)
T ss_dssp CEEEEETTSTTHHHHHHHTCCCSEEEC
T ss_pred eEEEecCCCchHHHHHHcCCCCceEEe
Confidence 9999998754 34688874
No 24
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=99.79 E-value=5.4e-20 Score=165.32 Aligned_cols=144 Identities=25% Similarity=0.295 Sum_probs=111.8
Q ss_pred cccceeeeccchhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecC
Q 020132 34 SFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIAST 113 (330)
Q Consensus 34 ~~~~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~ 113 (330)
...+.+.+.++.+++.++...|+.. + .. ..++. +.++++++ .|.|||++|
T Consensus 60 ~~l~~~~~~~~~~~~~l~~~~~~~~-~-------------~~-----~~~~~----~~i~~ll~--~g~ipVi~~----- 109 (219)
T 2ij9_A 60 TFCDYIGIAATRLNAMLLISAIPSA-A-------------KK-----VPVDF----MEAEELSK--LYRVVVMGG----- 109 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTB-C-------------SS-----CCSSH----HHHHHHHT--TCSEEEECC-----
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHh-c-------------CC-----CcCCH----HHHHHHHH--CCCEEEEeC-----
Confidence 3344555556666666666655432 1 00 11344 77888898 899999998
Q ss_pred CCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhc-cc-----cccccc
Q 020132 114 PDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYF-GA-----NVLHPR 187 (330)
Q Consensus 114 ~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~-g~-----~v~~p~ 187 (330)
|.. ++++|++|+.+|.+|+|+++++||||||||++||+++|+++++++++++|+.+++.. |. .++++.
T Consensus 110 --g~~----~~~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~~~~~~g~~~g~~~~~~~~ 183 (219)
T 2ij9_A 110 --TFP----GHTTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRSSAKAGTNVVIDLL 183 (219)
T ss_dssp --CSS----SSCTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC-----CCCCCSCHH
T ss_pred --CCC----CCCchHHHHHHHHHcCCCeEEEeeCCCceecCCCCCCCCCeEeeeeCHHHHHHHHhcCCCCCCCccchHHH
Confidence 222 246899999999999999999999999999999999999999999999999999765 44 678889
Q ss_pred ccceeeecccceEEeeeccc---------cCceeEe
Q 020132 188 TIIPVMRYDIPIVIRNIFNL---------SVPGIMI 214 (330)
Q Consensus 188 a~~~a~~~~i~v~i~~~~~~---------~~~GT~I 214 (330)
|++.+.+.++|++|.|+ +| +..||.|
T Consensus 184 a~~~~~~~~~~v~I~~g-~~~~l~~~~~g~~~GT~i 218 (219)
T 2ij9_A 184 AAKIIERSKIKTYVILG-TPENIMKAVKGEAVGTVI 218 (219)
T ss_dssp HHHHHHHHTCCEEEEEC-CHHHHHHHHTTCCCSEEE
T ss_pred HHHHHHHCCCeEEEEEC-CHhHHHHHHcCCCCCeEe
Confidence 99999999999999997 54 2458876
No 25
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=99.78 E-value=3.9e-20 Score=170.38 Aligned_cols=155 Identities=14% Similarity=0.089 Sum_probs=121.4
Q ss_pred cchhHHHHHHHHHHhcCCccccccceeEEEECC-------CCCCC-CCCCchhhHHHHHHhhccCCCccEEEeeeeecCC
Q 020132 43 GELWSAQMLAAVVRKNGIDCKWMDTREVLIVNP-------TSSNQ-VDPDFSESEKRLEKWFSQSPSNTIIATGFIASTP 114 (330)
Q Consensus 43 GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~-------~~~g~-~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~ 114 (330)
++.+++.++ +.|++.|++|+.+++.+..+++. +..|+ ..++. +.++.+++ .+.|||++|+ +.+.
T Consensus 81 ~~~~n~~l~-~~l~~~G~~a~~l~~~~~~~~~~~~~~~d~~~~g~~~~~~~----~~i~~ll~--~g~ipVi~~~-g~~~ 152 (258)
T 1gs5_A 81 AGTANKTLL-AWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSP----KLINSLLE--NGYLPVVSSI-GVTD 152 (258)
T ss_dssp HTHHHHHHH-HHHHHTTCCEEEECTTGGGCEEEEECCGGGBSBEEEEECCC----HHHHHHHH--TTCEEEECSE-EECT
T ss_pred hccchHHHH-HHHHHCCCCeEEEeecCCCEEEEEEcCCCCCCcCceeEECH----HHHHHHHH--CCCEEEEeCC-cCCC
Confidence 345555565 46799999999999887532222 11222 23555 77888898 8999999998 8888
Q ss_pred CCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcc-----ccccccccc
Q 020132 115 DNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFG-----ANVLHPRTI 189 (330)
Q Consensus 115 ~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g-----~~v~~p~a~ 189 (330)
.|+++++ ++|++|+.+|.+|+|+ +++||||||||++| ++++++++++|+.+++..| +...++.|+
T Consensus 153 ~g~~~~~---~~D~~Aa~lA~~l~Ad-li~ltdV~Gv~~~d------~~~i~~i~~~e~~~l~~~~~~~gGm~~k~~~a~ 222 (258)
T 1gs5_A 153 EGQLMNV---NADQAATALAATLGAD-LILLSDVSGILDGK------GQRIAEMTAAKAEQLIEQGIITDGMIVKVNAAL 222 (258)
T ss_dssp TSCEEEC---CHHHHHHHHHHHHTCE-EEEEESSSSCBCTT------SCBCCEECHHHHHHHHHTTCSCTHHHHHHHHHH
T ss_pred CCcEEEe---cHHHHHHHHHHHhCCc-EEEEeCCCceECCC------CCCCcccCHHHHHHHHhcCCCCCcHHHHHHHHH
Confidence 9998887 5899999999999999 99999999999976 5789999999999997543 345566788
Q ss_pred ceeeecccceEEeeeccc---------cCceeEee
Q 020132 190 IPVMRYDIPIVIRNIFNL---------SVPGIMIC 215 (330)
Q Consensus 190 ~~a~~~~i~v~i~~~~~~---------~~~GT~I~ 215 (330)
+++.+.++|++|.|+.+| +..||.|.
T Consensus 223 ~~~~~~~~~v~I~~~~~~~~l~~~~~~~~~GT~i~ 257 (258)
T 1gs5_A 223 DAARTLGRPVDIASWRHAEQLPALFNGMPMGTRIL 257 (258)
T ss_dssp HHHHHHTSCEEEEESSCGGGHHHHHTTCCSSEEEC
T ss_pred HHHHhCCCEEEEecCCCchHHHHHhcCCCCcEEEe
Confidence 888888999999998655 24588874
No 26
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=99.76 E-value=1.5e-19 Score=169.91 Aligned_cols=160 Identities=16% Similarity=0.206 Sum_probs=126.7
Q ss_pred ccchhHHHHHHHHHHhcCCcccccccee--EEEECCC----CCCC----CCCCchhhHHHHHHhhccCCCccEEEeeeee
Q 020132 42 HGELWSAQMLAAVVRKNGIDCKWMDTRE--VLIVNPT----SSNQ----VDPDFSESEKRLEKWFSQSPSNTIIATGFIA 111 (330)
Q Consensus 42 ~GE~~sa~~~~~~L~~~Gi~a~~l~~~~--~~~~~~~----~~g~----~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~ 111 (330)
.|+. ...++..|.+.|++++.+++.+ +...... .+|. ..++. +.++++++ .|.|||++|+ +
T Consensus 114 ~G~~--n~~l~~~l~~~g~~a~~l~~~~~~~l~~~~~~~~~d~g~~g~v~~v~~----~~i~~lL~--~g~IpVi~~v-~ 184 (298)
T 2rd5_A 114 VGKV--NKNLVSLINAAGATAVGLSGHDGRLLTARPVPNSAQLGFVGEVARVDP----SVLRPLVD--YGYIPVIASV-A 184 (298)
T ss_dssp HHTH--HHHHHHHHHHTTSCEEEEETTGGGCEEEEECTTHHHHBSEEEEEEECG----GGHHHHHH--TTCEEEEESE-E
T ss_pred hchH--HHHHHHHHHhCCCCccccChHHCCEEEEEeCCccccCCcceEEEEECH----HHHHHHHh--CCCEEEEcCe-e
Confidence 5666 4568899999999999998764 3322110 1221 11333 67888888 8999999998 8
Q ss_pred cCCCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcc--ccccccc--
Q 020132 112 STPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFG--ANVLHPR-- 187 (330)
Q Consensus 112 ~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g--~~v~~p~-- 187 (330)
.++.|+.+++ ++|++|+.+|.+|+|++++|||||||||++||+ | ++++++++++|+.+++..| .++|+|+
T Consensus 185 ~~~~G~~~~i---~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~~dp~--~-a~~i~~is~~e~~~~~~~g~~~gGM~~Kl~ 258 (298)
T 2rd5_A 185 ADDSGQAYNI---NADTVAGELAAALGAEKLILLTDVAGILENKED--P-SSLIKEIDIKGVKKMIEDGKVAGGMIPKVK 258 (298)
T ss_dssp ECTTSCEEEE---CHHHHHHHHHHHHTCSEEEEEESSSSEESSSSC--T-TSEECEEEHHHHHHHHHTTSSCTTHHHHHH
T ss_pred ECCCCCEEEE---CHHHHHHHHHHHcCCCEEEEEeCCcCeecCCCC--C-CCCcccCCHHHHHHHHHCCCCCCchHHHHH
Confidence 8888888776 589999999999999999999999999999998 4 8999999999999998654 5789984
Q ss_pred ccceeeecccc-eEEeeecccc----------CceeEeeC
Q 020132 188 TIIPVMRYDIP-IVIRNIFNLS----------VPGIMICR 216 (330)
Q Consensus 188 a~~~a~~~~i~-v~i~~~~~~~----------~~GT~I~~ 216 (330)
++..|.++|++ ++|.|+..|+ ..||.|.+
T Consensus 259 aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~GT~i~~ 298 (298)
T 2rd5_A 259 CCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEGAGTMITG 298 (298)
T ss_dssp HHHHHHHTTCSEEEEEETTSTTHHHHHHHSSSCSEEEEEC
T ss_pred HHHHHHHcCCCeEEEecCCCCchHHHHHhcCCCCceEEeC
Confidence 77888899998 9999986542 45888853
No 27
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=99.76 E-value=5.2e-19 Score=164.09 Aligned_cols=124 Identities=15% Similarity=0.166 Sum_probs=96.5
Q ss_pred HHHHHhhccCCCccEEEeeeeecCCCCCccccc---ccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhh
Q 020132 90 KRLEKWFSQSPSNTIIATGFIASTPDNIPTTLK---RDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILR 166 (330)
Q Consensus 90 ~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lg---rggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~ 166 (330)
..++.+++ .+.|||++|+.+.+.....+..| ++++|++|+.+|.+++|+++++||||||||++||+.+|++++++
T Consensus 132 ~~i~~lL~--~g~ipVi~g~~g~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~Li~lTDVdGvy~~dP~~~~~a~~i~ 209 (270)
T 2ogx_B 132 SAVPLSLA--EVNAVVFSGMPPYKLWMRPAAEGVIPPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTSKDATFIP 209 (270)
T ss_dssp CHHHHHCT--TCCEEEEECSCTTGGGCCCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCSSSCTTCCEES
T ss_pred HHHHHHHh--CCCEEEEeCCccccccccccccccCCCCCcHHHHHHHHHhcCCCEEEEEeCCCcccCCCCCCCCCCeEcc
Confidence 45888887 89999999997655321111222 36899999999999999999999999999999999999999999
Q ss_pred hhhhHHhhhhhhcccccccccccceeee--cccceEEeeecccc---------CceeEeeC
Q 020132 167 TLSYQEAWEMSYFGANVLHPRTIIPVMR--YDIPIVIRNIFNLS---------VPGIMICR 216 (330)
Q Consensus 167 ~is~~e~~~l~~~g~~v~~p~a~~~a~~--~~i~v~i~~~~~~~---------~~GT~I~~ 216 (330)
+++++|+.+++..| .++++.+...+.. .+++++|.|+..|+ ..||.|.+
T Consensus 210 ~i~~~e~~~~~~~g-~~~~ggm~~kl~aa~~~~~v~I~~g~~~~~l~~~l~g~~~GT~i~~ 269 (270)
T 2ogx_B 210 RISVDEMKAKGLHD-SILEFPVLDLLQSAQHVREVQVVNGLVPGNLTRALAGEHVGTIITA 269 (270)
T ss_dssp EEEHHHHHHTTCCC-TTSCHHHHHHHHHCSSCCEEEEEETTSTTHHHHHHTTCCCSEEEEC
T ss_pred eeCHHHHHHHhcCC-CcccHHHHHHHHHhhcCCcEEEEeCCCchHHHHHHcCCCCCeEecC
Confidence 99999999997644 4566543333222 46799999987653 56999864
No 28
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=99.76 E-value=1.5e-19 Score=171.67 Aligned_cols=162 Identities=15% Similarity=0.179 Sum_probs=126.7
Q ss_pred eccchhHHHHHHHHHHhcCCcccccccee--EEEECC---CCCCCC----CCCchhhHHHHHHhhccCCCccEEEeeeee
Q 020132 41 GHGELWSAQMLAAVVRKNGIDCKWMDTRE--VLIVNP---TSSNQV----DPDFSESEKRLEKWFSQSPSNTIIATGFIA 111 (330)
Q Consensus 41 ~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~--~~~~~~---~~~g~~----~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~ 111 (330)
+.|+. ...++..|.+.|++++.+++.+ +..... ..+|.. .++. +.++++++ .|.|||++++ +
T Consensus 126 ~~G~i--n~~l~~~L~~~g~~a~gl~~~~a~~l~a~~~~~~d~g~~g~v~~v~~----~~i~~lL~--~g~IpVi~~v-~ 196 (321)
T 2v5h_A 126 LVGRV--NKDIVSRINTTGGRAVGFCGTDGRLVLARPHDQEGIGFVGEVNSVNS----EVIEPLLE--RGYIPVISSV-A 196 (321)
T ss_dssp HHHTH--HHHHHHHHHHHTCCEEEECTTGGGSEEEEECSSCSSBSBEEEEEECG----GGTHHHHH--TTCEEEEESE-E
T ss_pred HhChH--HHHHHHHHHhCCCCeeeeChhhccEEEeecCCCccccccceeEEecH----HHHHHHHH--CCCeEEEeCc-e
Confidence 35655 4467889999999999887653 333221 022221 1333 67788888 8999999965 8
Q ss_pred cCCCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcc--cccccc--c
Q 020132 112 STPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFG--ANVLHP--R 187 (330)
Q Consensus 112 ~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g--~~v~~p--~ 187 (330)
.++.|...++ ++|++|+.+|.+|+|++++|+|||||||++||+ +++++++++++|+.+++..| .++|+| +
T Consensus 197 ~~~~G~~~~i---~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dp~---~a~~i~~is~~e~~~l~~~g~~~gGM~~Kl~ 270 (321)
T 2v5h_A 197 ADENGQSFNI---NADTVAGEIAAALNAEKLILLTDTRGILEDPKR---PESLIPRLNIPQSRELIAQGIVGGGMIPKVD 270 (321)
T ss_dssp ECTTSCEEEC---CHHHHHHHHHHHTTCSEEEEEESSSSCBSSTTC---TTCBCCEEEHHHHHHHHHTTSSCTTHHHHHH
T ss_pred ECCCCCEEEe---CHHHHHHHHHHHcCCCEEEEeeCCCceEcCCCC---CCeeeeEEcHHHHHHHHhCCCCcCcHHHHHH
Confidence 8888875543 589999999999999999999999999999998 48999999999999998754 678998 5
Q ss_pred ccceeeecccc-eEEeeeccc----------cCceeEeeCC
Q 020132 188 TIIPVMRYDIP-IVIRNIFNL----------SVPGIMICRP 217 (330)
Q Consensus 188 a~~~a~~~~i~-v~i~~~~~~----------~~~GT~I~~~ 217 (330)
|+..|.++|+| ++|.|+..+ +..||.|.+.
T Consensus 271 Aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~~~ 311 (321)
T 2v5h_A 271 CCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGS 311 (321)
T ss_dssp HHHHHHHTTCSEEEEEETTSTTHHHHHHHCCCCSEEEEECC
T ss_pred HHHHHHHcCCCEEEEEeCCCCchHHHHHhcCCCCceEEECC
Confidence 88889999998 999997543 3569999764
No 29
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=99.73 E-value=1e-18 Score=162.99 Aligned_cols=156 Identities=19% Similarity=0.174 Sum_probs=124.0
Q ss_pred ccchhHHHHHHHHHHhcCCcccccccee--EEEECC-C---CCCC----CCCCchhhHHHHHHhhccCCCccEEEeeeee
Q 020132 42 HGELWSAQMLAAVVRKNGIDCKWMDTRE--VLIVNP-T---SSNQ----VDPDFSESEKRLEKWFSQSPSNTIIATGFIA 111 (330)
Q Consensus 42 ~GE~~sa~~~~~~L~~~Gi~a~~l~~~~--~~~~~~-~---~~g~----~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~ 111 (330)
.|+. ...+...|.+.|++++.+++.+ +..... + .+|. ..++. +.++++++ .|.|||++|+ +
T Consensus 99 ~G~~--~~~l~~~l~~~g~~a~~l~~~~~~~l~~~~~~~~~d~g~~g~v~~~~~----~~i~~ll~--~g~IpVi~~v-~ 169 (282)
T 2bty_A 99 VGKI--NKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNP----EILHALIE--NDYIPVIAPV-G 169 (282)
T ss_dssp HHTH--HHHHHHHHHTTTCCEEEEETTGGGSEEEEECCTTCCCBSBEEEEEECT----HHHHHHHH--TTCEEEEESE-E
T ss_pred hhHH--HHHHHHHHHhCCCCceecChhhCCEEEEecCCcccCCCcceEEEEecH----HHHHHHHH--CCCEEEECCC-c
Confidence 5766 4568899999999999997654 332221 0 1222 12344 78888998 8999999998 8
Q ss_pred cCCCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcc--cccccc--c
Q 020132 112 STPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFG--ANVLHP--R 187 (330)
Q Consensus 112 ~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g--~~v~~p--~ 187 (330)
.++.|+.+++ ++|++|+.+|.+|+|+++++||||||||++ | +++++++++|+.+++..| .++|.| +
T Consensus 170 ~~~~G~~~~~---~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~-~------~~i~~i~~~e~~~~~~~g~~~gGM~~K~~ 239 (282)
T 2bty_A 170 IGEDGHSYNI---NADTAAAEIAKSLMAEKLILLTDVDGVLKD-G------KLISTLTPDEAEELIRDGTVTGGMIPKVE 239 (282)
T ss_dssp ECSSSCEEEC---CHHHHHHHHHHHHTCSEEEEEESSSSCEET-T------EECCEECHHHHHHHHTTTCSCTTHHHHHH
T ss_pred cCCCCCEEEE---CHHHHHHHHHHHcCCCEEEEEeCCCCeecC-c------hhhhhCCHHHHHHHHHcCCCCCcHHHHHH
Confidence 8888888776 589999999999999999999999999997 3 799999999999998755 367887 5
Q ss_pred ccceeeecccc-eEEeeecccc----------CceeEeeC
Q 020132 188 TIIPVMRYDIP-IVIRNIFNLS----------VPGIMICR 216 (330)
Q Consensus 188 a~~~a~~~~i~-v~i~~~~~~~----------~~GT~I~~ 216 (330)
|+..|.++|+| ++|.|+..|+ ..||.|.+
T Consensus 240 aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~ 279 (282)
T 2bty_A 240 CAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKE 279 (282)
T ss_dssp HHHHHHHTTCSCEEEEETTSTTHHHHHHSSSSCSSEEECC
T ss_pred HHHHHHHhCCCeEEEecCCCCchHHHHHhcCCCCceEEEe
Confidence 88889999998 9999976543 46999965
No 30
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A*
Probab=99.73 E-value=1.2e-18 Score=159.81 Aligned_cols=144 Identities=16% Similarity=0.174 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccccC
Q 020132 46 WSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDG 125 (330)
Q Consensus 46 ~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrgg 125 (330)
++..+ .+.|.+.|++++.+++.++.. . |+. +. +.++.+++ .|.|||++|+++.+.+|+.++ ++
T Consensus 84 ln~~~-v~~l~~~G~~a~~l~~~~~~~--~---g~v--~~----~~i~~ll~--~g~ipVi~~~~~~~~~~~~~~---~~ 146 (249)
T 3ll5_A 84 LDLMV-IDAMIEMGMRPISVPISALRY--D---GRF--DY----TPLIRYID--AGFVPVSYGDVYIKDEHSYGI---YS 146 (249)
T ss_dssp HHHHH-HHHHHHTTCCEEECCGGGSCB--S---SSB--CC----HHHHHHHH--TTCEEEEECEEEEEETTEEEE---EC
T ss_pred HHHHH-HHHHHHCCCcEEEEcHHHccc--c---cEE--cH----HHHHHHHH--CCCEEEECCCEEEcCCCceee---ec
Confidence 34444 488999999999999988753 1 223 55 88899998 899999999888776666544 46
Q ss_pred cchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhh--hccccccccc--cccee-eecccceE
Q 020132 126 SDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMS--YFGANVLHPR--TIIPV-MRYDIPIV 200 (330)
Q Consensus 126 sD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~--~~g~~v~~p~--a~~~a-~~~~i~v~ 200 (330)
+|++|+.+|.+|+|++++++|||||||++||+.+|+++++++++ +++.... ..+.++|.|+ ++..+ .++|++++
T Consensus 147 ~D~~Aa~lA~~l~Ad~li~ltdvdGv~~~dp~~~~~a~~i~~i~-~~~~~~~~~~~~tGgM~~Kl~aA~~a~~~~Gv~v~ 225 (249)
T 3ll5_A 147 GDDIMADMAELLKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDID-TNITFDRVQNDVTGGIGKKFESMVKMKSSVKNGVY 225 (249)
T ss_dssp HHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCCEEC-CCC-------------HHHHHHHHHHHTTCTTCEE
T ss_pred HHHHHHHHHHhcCCCEEEEEeCCCccCCCCCCCCCCcEEHHHHH-HHHhcccCCCeeECCHHHHHHHHHHHHHhcCCEEE
Confidence 89999999999999999999999999999999999999999994 2222222 1345788884 45555 88899999
Q ss_pred Eeeeccc
Q 020132 201 IRNIFNL 207 (330)
Q Consensus 201 i~~~~~~ 207 (330)
|.|+..+
T Consensus 226 I~~g~~~ 232 (249)
T 3ll5_A 226 LINGNHP 232 (249)
T ss_dssp EEETTSG
T ss_pred EEeCCCh
Confidence 9997654
No 31
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=99.70 E-value=4e-18 Score=160.40 Aligned_cols=163 Identities=13% Similarity=0.169 Sum_probs=126.1
Q ss_pred eeccchhHHHHHHHHHHhcCCcccccccee--EEEECC------C---------CCCCC-CCCchhhHHHHHHhhccCCC
Q 020132 40 VGHGELWSAQMLAAVVRKNGIDCKWMDTRE--VLIVNP------T---------SSNQV-DPDFSESEKRLEKWFSQSPS 101 (330)
Q Consensus 40 ~~~GE~~sa~~~~~~L~~~Gi~a~~l~~~~--~~~~~~------~---------~~g~~-~~~~~~~~~~i~~~l~~~~~ 101 (330)
++.|+. ...+...|.+.|++++.+++.+ +..... + .+|.. .+.... .+.++.+++ .|
T Consensus 102 ~~~G~~--~~~l~~~l~~~g~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~-~~~i~~lL~--~g 176 (300)
T 2buf_A 102 VLGGQV--NKDIVNLINRHGGSAIGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVN-VGLLNMLVK--GD 176 (300)
T ss_dssp HHHHTH--HHHHHHHHHHTTCCEEEEEETGGGCEEEEECCCCCC--------CCCCBSBEEEEEEC-HHHHHHHHH--TT
T ss_pred HHHHHH--HHHHHHHHHhCCCCEEEecCCCCCeeeeeeccccccchhhcccccccCCcceeEEEEC-HHHHHHHHH--CC
Confidence 346777 7888999999999999988663 332221 0 12211 011111 378888998 89
Q ss_pred ccEEEeeeeecCCCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcc-
Q 020132 102 NTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFG- 180 (330)
Q Consensus 102 ~VpVv~G~i~~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g- 180 (330)
.|||++++ +.++.|...++ ++|++|+.+|.+|+|++++++|||||||++ +++++++++++|+.+++..|
T Consensus 177 ~IpVi~~v-~~~~~G~~~~i---~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~------~a~~i~~i~~~e~~~~~~~~~ 246 (300)
T 2buf_A 177 FIPVIAPI-GVGSNGESYNI---NADLVAGKVAEALKAEKLMLLTNIAGLMDK------QGQVLTGLSTEQVNELIADGT 246 (300)
T ss_dssp CEEEEEEE-EECTTSCEEEC---CHHHHHHHHHHHHTCSEEEEEESSSCCBCT------TSCBCCEECHHHHHHHHHTTC
T ss_pred CEEEEcCc-eeCCCCCEEEE---CHHHHHHHHHHHcCCCEEEEEeCCCCeECC------CCcChhhCCHHHHHHHHHcCC
Confidence 99999965 88888887765 489999999999999999999999999987 37899999999999998654
Q ss_pred -cccccc--cccceeeecccc-eEEeeecccc----------CceeEeeCC
Q 020132 181 -ANVLHP--RTIIPVMRYDIP-IVIRNIFNLS----------VPGIMICRP 217 (330)
Q Consensus 181 -~~v~~p--~a~~~a~~~~i~-v~i~~~~~~~----------~~GT~I~~~ 217 (330)
.++|+| +++..|.++|++ ++|.|+..|+ ..||.|.+.
T Consensus 247 ~~ggM~~Kv~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~ 297 (300)
T 2buf_A 247 IYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNR 297 (300)
T ss_dssp SCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHSSTTCCSEEEECC
T ss_pred CCCccHHHHHHHHHHHHhCCCEEEEeeCCCCchHHHHHhcCCCCceEEEeC
Confidence 578999 588888899999 9999975442 469999763
No 32
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=99.70 E-value=1.9e-18 Score=160.89 Aligned_cols=148 Identities=14% Similarity=0.256 Sum_probs=122.2
Q ss_pred HHHHHHHHhcCCccccccceeEEEECCCC-----CCC----CCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcc
Q 020132 49 QMLAAVVRKNGIDCKWMDTREVLIVNPTS-----SNQ----VDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPT 119 (330)
Q Consensus 49 ~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~-----~g~----~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~ 119 (330)
+.+.+.|.+.|+++..+++.+..+++... |++ .+++. +.++.+++ .|.|||++| ++.+++|+.+
T Consensus 117 ~~i~~~L~~~G~~a~~l~g~dg~llta~~~~~~d~g~vG~i~~v~~----~~i~~lL~--~g~IPVi~~-v~~~~~G~~~ 189 (279)
T 3l86_A 117 KNLQEKLRQAGVSCQQLKSDIKHVVAADYLDKDTYGYVGDVTHINK----RVIEEFLE--NRQIPILAS-LGYSKEGDML 189 (279)
T ss_dssp HHHHHHHHHTTCCEEECSGGGGGTEEEEESCHHHHBSBEEEEEECH----HHHHHHHH--TTCEEEEES-EEECTTSCEE
T ss_pred HHHHHHHHhCCCCEEEEecCcCCEEEeeccCccccCcccccchhhH----HHHHHHHh--CCcEEEECC-cEECCCCCEe
Confidence 77899999999999999888743333221 221 12344 88999998 899999999 6888888887
Q ss_pred cccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcc--cccccc--cccceeeec
Q 020132 120 TLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFG--ANVLHP--RTIIPVMRY 195 (330)
Q Consensus 120 ~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g--~~v~~p--~a~~~a~~~ 195 (330)
++ ++|++|+.+|.+|+|++++|+|||||||+ +++++++++++|+.+++..| .++|.| +|+..|.++
T Consensus 190 ~i---~~D~~Aa~lA~~L~Ad~LiilTDVdGV~~-------d~~~I~~i~~~e~~~l~~~~~~tGGM~~Kl~aa~~a~~~ 259 (279)
T 3l86_A 190 NI---NADYLATAVAVALAADKLILMTNVKGVLE-------NGAVLEKITSHQVQEKIDTAVITAGMIPKIESAAKTVAA 259 (279)
T ss_dssp EC---CHHHHHHHHHHHTTCSEEEEECSSSSCEE-------TTEECCEEEGGGSHHHHHTTSSCTTHHHHHHHHHHHHHT
T ss_pred ec---CHHHHHHHHHHHcCCCEEEEEeCCCcccc-------CCEehhhccHHHHHHHHhCCCCcCcHHHHHHHHHHHHHc
Confidence 76 58999999999999999999999999994 36789999999999998644 578888 588888899
Q ss_pred ccc-eEEeeeccccCceeEeeC
Q 020132 196 DIP-IVIRNIFNLSVPGIMICR 216 (330)
Q Consensus 196 ~i~-v~i~~~~~~~~~GT~I~~ 216 (330)
|++ ++|.|+++. ||+|..
T Consensus 260 Gv~~v~I~~~~~~---GT~i~~ 278 (279)
T 3l86_A 260 GVGQVLIGDNLLT---GTLITA 278 (279)
T ss_dssp TCSEEEEESSSSC---SEEEEC
T ss_pred CCCEEEEeccCCC---CeEEec
Confidence 998 999998874 999964
No 33
>1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1
Probab=99.68 E-value=1.7e-17 Score=157.03 Aligned_cols=119 Identities=17% Similarity=0.154 Sum_probs=97.0
Q ss_pred HHHHHhhccCCCccEEEeee----eecCCCCCccccc---ccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHh
Q 020132 90 KRLEKWFSQSPSNTIIATGF----IASTPDNIPTTLK---RDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEA 162 (330)
Q Consensus 90 ~~i~~~l~~~~~~VpVv~G~----i~~~~~g~~~~lg---rggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a 162 (330)
+.++++++ .|.|||++|+ ++.+.++ ++| ++++|++|+.+|.+|+|++++++|||||||++||+ |++
T Consensus 177 ~~i~~lL~--~g~IpV~~Gg~giPi~~~~d~---~~g~~~~~d~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~~p~--~~a 249 (314)
T 1e19_A 177 ETIKKLVE--RGVIVIASGGGGVPVILEDGE---IKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGT--EKE 249 (314)
T ss_dssp HHHHHHHH--TTCEEECSGGGCEEEEEETTE---EEECCCCCCHHHHHHHHHHHTTCSEEEEEESSSSCEETTTS--TTC
T ss_pred HHHHHHHH--CCCEEEEeCCCccCeEECCCC---cceeEEeccHHHHHHHHHHHcCCCEEEEeccCCEEECCCCC--CCC
Confidence 78899998 8999999975 3334332 344 37899999999999999999999999999999994 889
Q ss_pred hhhhhhhhHHhhhhhhcc---ccccccc---ccceeeecccceEEeee------ccccCceeEeeC
Q 020132 163 VILRTLSYQEAWEMSYFG---ANVLHPR---TIIPVMRYDIPIVIRNI------FNLSVPGIMICR 216 (330)
Q Consensus 163 ~~i~~is~~e~~~l~~~g---~~v~~p~---a~~~a~~~~i~v~i~~~------~~~~~~GT~I~~ 216 (330)
+++++++++|+.+++..| .++|.|+ |++.+.+.+++++|.|. ++. ..||+|.+
T Consensus 250 ~~i~~i~~~e~~~~~~~g~~~~GgM~~Kv~aa~~~~~~~~~~v~I~~~~~l~~~~~g-~~GT~i~~ 314 (314)
T 1e19_A 250 QWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGGERAIIAHLEKAVEALEG-KTGTQVLP 314 (314)
T ss_dssp EECCEEEHHHHHHHHHTTCSCTTTHHHHHHHHHHHHHHTCSEEEEEEGGGHHHHHTT-SSSEEEEC
T ss_pred eECCEECHHHHHHHHhCCCcCCCChHHHHHHHHHHHHhCCCeEEEecHHHHHHHHcC-CCCeEEcC
Confidence 999999999999998654 3789996 66767778899999883 233 46998863
No 34
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A*
Probab=99.67 E-value=6.3e-17 Score=149.78 Aligned_cols=145 Identities=14% Similarity=0.079 Sum_probs=109.8
Q ss_pred HHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccccCcchh
Q 020132 50 MLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDFS 129 (330)
Q Consensus 50 ~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrggsD~~ 129 (330)
.+++.|.++|++++.+.+.++...+++ ..++. +.++.+++ .|.|||++||++.+.+|++. ++++|++
T Consensus 102 ~l~~~l~~~G~~a~~l~~~d~~~~~~g----~~v~~----~~i~~lL~--~g~ipVi~~~~~~~~~g~~~---~~~~D~~ 168 (266)
T 3k4o_A 102 IIIDTLQSYDIPAVSIQPSSFVVFGDK----LIFDT----SAIKEMLK--RNLVPVIHGDIVIDDKNGYR---IISGDDI 168 (266)
T ss_dssp HHHHHHHTTTCCEEEECGGGTCEESSS----CBCCC----HHHHHHHH--TTCEEEEECEEEEESSSCEE---EECHHHH
T ss_pred HHHHHHHHCCCcEEEeeHHHcCcccCc----eEecH----HHHHHHHH--CCCEEEEeCCEEEcCCCCee---eeCHHHH
Confidence 368899999999999999988766542 24566 88899998 89999999998888777654 3578999
Q ss_pred HHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhh--------ccccccccc--ccceeeecccce
Q 020132 130 AAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSY--------FGANVLHPR--TIIPVMRYDIPI 199 (330)
Q Consensus 130 A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~--------~g~~v~~p~--a~~~a~~~~i~v 199 (330)
|+.+|.+|+|++++++||||||| +||+.++ +++..|+.++.. .+.++|.|+ ++..|.+ ++
T Consensus 169 Aa~lA~~l~Ad~li~ltdvdGv~-~d~~~i~------~~~~~e~~~l~~~~~~~~~~~~tGGM~~Kv~aa~~a~~---~v 238 (266)
T 3k4o_A 169 VPYLANELKADLILYATDVDGVL-IDNKPIK------RIDKNNIYKILNYLSGSNSIDVTGGMKYKIEMIRKNKC---RG 238 (266)
T ss_dssp HHHHHHHHTCSEEEEEESSSSSB-SSSSBCS------EECTTTHHHHHHHHHSTTCSCCSSHHHHHHHHHHHTTC---EE
T ss_pred HHHHHHHcCCCEEEEEecCCeEE-eCCeecC------cCCHHHHHHHHHHhccccCCcccCCHHHHHHHHHHHhc---CE
Confidence 99999999999999999999999 8887554 444443333322 344678885 3333333 89
Q ss_pred EEeeeccc---------cCceeEeeCC
Q 020132 200 VIRNIFNL---------SVPGIMICRP 217 (330)
Q Consensus 200 ~i~~~~~~---------~~~GT~I~~~ 217 (330)
+|.|+..| +..||.|.+.
T Consensus 239 ~I~~g~~~~~l~~~l~g~~~GT~i~~~ 265 (266)
T 3k4o_A 239 FVFNGNKANNIYKALLGEVEGTEIDFS 265 (266)
T ss_dssp EEEETTSTTHHHHHHTTCCCSEEEECC
T ss_pred EEEeCCCccHHHHHhCCCCCceEEEeC
Confidence 99997644 3469999763
No 35
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=99.56 E-value=1.5e-15 Score=143.83 Aligned_cols=119 Identities=19% Similarity=0.255 Sum_probs=93.9
Q ss_pred HHHHHhhccCCCccEEEeee----eecCCCCC----cccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhH
Q 020132 90 KRLEKWFSQSPSNTIIATGF----IASTPDNI----PTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSE 161 (330)
Q Consensus 90 ~~i~~~l~~~~~~VpVv~G~----i~~~~~g~----~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~ 161 (330)
+.++.+|+ .|.|||++|+ ++.+++|. ..++ ++|.+|+.+|.+|+|++++|+|||||||+ ||+ .|+
T Consensus 177 ~~i~~lL~--~g~IpI~~g~~g~pv~~~~~g~~~g~~~~i---d~D~~Aa~lA~~l~Ad~LiilTdVdGVy~-dp~-~p~ 249 (316)
T 2e9y_A 177 DLIAEASA--ESPAVVALGGGGVPVVERPGGVLEPVEAVV---DKDLASSLLATQLNADLLVILTDVPGVAV-NYG-REG 249 (316)
T ss_dssp HHHHHHHH--HCSEEEECGGGCEEEEECTTSCEEECSCCC---CHHHHHHHHHHHTTCSEEEEEESSSSCEE-TTT-STT
T ss_pred HHHHHHHH--CCCEEEEECCCCCCeeECCCCCeecceeee---CHHHHHHHHHHHcCCCEEEEEeCchHhhC-CCC-CCC
Confidence 78899998 7899999864 34456663 2222 68999999999999999999999999999 885 689
Q ss_pred hhhhhhhhhHHhhhhhhc---cccccccc--ccceeeeccc-ceEEeeec------cccCceeEeeC
Q 020132 162 AVILRTLSYQEAWEMSYF---GANVLHPR--TIIPVMRYDI-PIVIRNIF------NLSVPGIMICR 216 (330)
Q Consensus 162 a~~i~~is~~e~~~l~~~---g~~v~~p~--a~~~a~~~~i-~v~i~~~~------~~~~~GT~I~~ 216 (330)
++++++++++|+.+++.. +.++|.|+ ++..+.++|+ +++|.|.. .. ..||.|.+
T Consensus 250 a~~i~~i~~~e~~~~~~~g~~~~GgM~~Kv~aa~~a~~~gv~~v~I~~~~~l~~~l~g-~~GT~i~~ 315 (316)
T 2e9y_A 250 ERWLRRAAASELKKYLREGHFPPGSMGPKVEAAISFVERTGKPAVIGSLEEARQVLSL-QAGTVVML 315 (316)
T ss_dssp CEECSEEEHHHHHHHHHTTCSCTTTHHHHHHHHHHHHHHHCSCEEEEESTTHHHHHTT-SSSEEEEC
T ss_pred CcCCcEEcHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCCCeEEECcHHHHHHHHcC-CCCeEEec
Confidence 999999999999999763 34678884 5666678899 78887631 22 46898864
No 36
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=99.54 E-value=2.2e-15 Score=149.14 Aligned_cols=152 Identities=15% Similarity=0.100 Sum_probs=116.0
Q ss_pred HHHHHHHHhcCCcc----ccccceeEEEECCCC--------CCC----CCCCchhhHHHHHHhhccCCCccEEEeeeeec
Q 020132 49 QMLAAVVRKNGIDC----KWMDTREVLIVNPTS--------SNQ----VDPDFSESEKRLEKWFSQSPSNTIIATGFIAS 112 (330)
Q Consensus 49 ~~~~~~L~~~Gi~a----~~l~~~~~~~~~~~~--------~g~----~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~ 112 (330)
..+.+.|. .|+++ +.+++.+..+.+... +|. ..++. +.++.+|+ .|.|||++++ +.
T Consensus 124 ~~l~~~l~-~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~----~~i~~lL~--~g~ipIi~~~-~~ 195 (456)
T 3d2m_A 124 SRFEAALC-GSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDT----AALRFQLD--AGNIVWMPPL-GH 195 (456)
T ss_dssp HHHHHHHH-TC--------CCCEECCSCEEEEECCEETTEECBTBEEEEEECH----HHHHHHHH--TTCEEEECSE-EE
T ss_pred HHHHHHHh-cccccCCCccceeeccCcEEEEEEcccccCcccCceeeEEEECH----HHHHHHHH--CCCeEEECCc-cc
Confidence 35577888 99998 777776632222111 111 12333 78899998 8999999997 77
Q ss_pred CCCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHHhhhhhhcccccccc--cccc
Q 020132 113 TPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHP--RTII 190 (330)
Q Consensus 113 ~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~v~~p--~a~~ 190 (330)
+..|+..++ ++|.+|+.+|.+|+|++++|+|||||||++ +++++++++++|+.+++..|.++|.| +|+.
T Consensus 196 ~~~g~~~~~---~~D~~Aa~lA~~l~Ad~li~lTdvdGv~~~------~~~~i~~i~~~e~~~~~~~g~ggm~~Kl~aa~ 266 (456)
T 3d2m_A 196 SYGGKTFNL---DMVQAAASVAVSLQAEKLVYLTLSDGISRP------DGTLAETLSAQEAQSLAEHAASETRRLISSAV 266 (456)
T ss_dssp CTTSCEEEC---CHHHHHHHHHHHHTCSEEEEEESSSSCBCT------TSCBCSEEEHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCCCEEEE---CHHHHHHHHHHHcCCCEEEEEECCccccCC------CCCccccCCHHHHHHHHhccCCChHHHHHHHH
Confidence 888888775 589999999999999999999999999986 47899999999999998777789999 5788
Q ss_pred eeeecccc-eEEeeeccc----------cCceeEeeCC
Q 020132 191 PVMRYDIP-IVIRNIFNL----------SVPGIMICRP 217 (330)
Q Consensus 191 ~a~~~~i~-v~i~~~~~~----------~~~GT~I~~~ 217 (330)
.|.++|++ ++|.|+..| +..||.|.+.
T Consensus 267 ~a~~~gv~~v~I~~~~~~~~ll~~l~~~~~~GT~i~~~ 304 (456)
T 3d2m_A 267 AALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKE 304 (456)
T ss_dssp HHHHTTCSEEEEEETTSTTHHHHHHHCSSCSSEEEECC
T ss_pred HHHHhCCCEEEEecCcCCchHHHHHHhhcCCceeeecc
Confidence 88889996 999987432 3469999765
No 37
>3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A*
Probab=99.54 E-value=2.9e-15 Score=141.01 Aligned_cols=158 Identities=13% Similarity=0.123 Sum_probs=117.4
Q ss_pred ccchhHHHHHHHHHHhcCCccccccceeEEEECC---CCCC---C-CCCCchhhHHHHHHhhccCCCccEEEeeeeecCC
Q 020132 42 HGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNP---TSSN---Q-VDPDFSESEKRLEKWFSQSPSNTIIATGFIASTP 114 (330)
Q Consensus 42 ~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~---~~~g---~-~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~ 114 (330)
.|+ + ...+++.|.+.|++|+++.+.-+ .... ..+| + .++|. +.++.+++ .|.|||++|+ +.+.
T Consensus 123 ~~~-v-n~~lv~~L~~~G~~Av~l~gg~~-~a~~~~~~d~g~~G~i~~v~~----~~i~~lL~--~g~IpVi~~~-g~~~ 192 (307)
T 3zzh_A 123 FLE-Q-NLKLVTALEQLGVRARPITSGVF-TADYLDKDKYKLVGNIKSVTK----EPIEASIK--AGALPILTSL-AETA 192 (307)
T ss_dssp HHH-H-HHHHHHHHHHTTCCEEEECSSSE-EEEESCHHHHBSBEEEEEECC----HHHHHHHH--HTCEEEECCC-EECT
T ss_pred HHH-H-HHHHHHHHHhCCCCeeEEcCCcE-EEEecCccccCccccccccCH----HHHHHHHH--CCCEEEEeCC-eECC
Confidence 454 3 45668999999999999987433 2221 0122 2 34666 88999998 7999999998 7788
Q ss_pred CCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHH-hhhhhhcc--ccccccc--cc
Q 020132 115 DNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQE-AWEMSYFG--ANVLHPR--TI 189 (330)
Q Consensus 115 ~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e-~~~l~~~g--~~v~~p~--a~ 189 (330)
+|+++++ ++|.+|+.+|.+|+|++++|+|||||||++ +++++++++++.| +.+++..| .++|.|+ ++
T Consensus 193 ~G~~~~i---~~D~~A~~lA~~L~Ad~Li~lTdV~GV~~~-----~~~~~i~~i~~~e~~~~l~~~~~~tGGM~~Kl~aa 264 (307)
T 3zzh_A 193 SGQMLNV---NADVAAGELARVFEPLKIVYLNEKGGIING-----STGEKISMINLDEEYDDLMKQSWVKYGTKLKIREI 264 (307)
T ss_dssp TCBEEBC---CHHHHHHHHHHHHCCSEEEEECSSCSCEET-----TTTEECCEEEHHHHHHHHHTSTTSCHHHHHHHHHH
T ss_pred CCcEEec---CHHHHHHHHHHhCCCCEEEEEeCCcceecC-----CCCcCCcccCHHHHHHHHHhCCCCCCcHHHHHHHH
Confidence 8888776 589999999999999999999999999986 4688999999975 56776543 5788886 22
Q ss_pred ceeee---cccceEEeeec-------cccCceeEeeCC
Q 020132 190 IPVMR---YDIPIVIRNIF-------NLSVPGIMICRP 217 (330)
Q Consensus 190 ~~a~~---~~i~v~i~~~~-------~~~~~GT~I~~~ 217 (330)
+.|.+ .+.++.|.+.. ..+..||.|.+.
T Consensus 265 ~~a~~~v~~g~~v~I~~~~~ll~elft~~g~GT~I~~~ 302 (307)
T 3zzh_A 265 KELLDYLPRSSSVAIINVQDLQKELFTDSGAGTMIRRG 302 (307)
T ss_dssp HHHHHHSCTTCCEEEECGGGHHHHHHSCCCCSEEEECC
T ss_pred HHHHHHhccCeEEEEeCccHHHHHHhcCCCCcEEEecC
Confidence 33333 37788888742 234569999764
No 38
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A*
Probab=99.51 E-value=4.3e-15 Score=140.27 Aligned_cols=119 Identities=16% Similarity=0.202 Sum_probs=93.8
Q ss_pred HHHHHhhccCCCccEEEeeeee-----cCCCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhh
Q 020132 90 KRLEKWFSQSPSNTIIATGFIA-----STPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVI 164 (330)
Q Consensus 90 ~~i~~~l~~~~~~VpVv~G~i~-----~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~ 164 (330)
+.++.+++ .|.|||++|+.| .+..|+..+ .++|++|+.+|.+|+|++++|+|||||||+ || ..|++++
T Consensus 173 ~~i~~lL~--~g~IpIi~Gg~Gipv~~~~~~g~~~~---~~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~-dp-~~~~a~~ 245 (310)
T 2we5_A 173 ETINTLIK--NDIITISCGGGGIPVVGQELKGVEAV---IDKDFASEKLAELVDADALVILTGVDYVCI-NY-GKPDEKQ 245 (310)
T ss_dssp HHHHHHHH--TTCEEECCGGGCEEEETTTTEECCCC---CCHHHHHHHHHHHTTCSEEEEECSCSSCEE-ST-TSTTCEE
T ss_pred HHHHHHHH--CCCEEEEECCCCCCCcCCCCCCcEee---cCHHHHHHHHHHHcCCCEEEEEeCchHhhC-CC-CCCCCeE
Confidence 88999998 899999997633 122344443 358999999999999999999999999999 78 4789999
Q ss_pred hhhhhhHHhhhhhhcc---ccccccc--ccceeeeccc--ceEEeee------ccccCceeEee
Q 020132 165 LRTLSYQEAWEMSYFG---ANVLHPR--TIIPVMRYDI--PIVIRNI------FNLSVPGIMIC 215 (330)
Q Consensus 165 i~~is~~e~~~l~~~g---~~v~~p~--a~~~a~~~~i--~v~i~~~------~~~~~~GT~I~ 215 (330)
+++++++|+.+++..| .++|.|+ |+..|.++|+ +++|.+. +..+..||.|.
T Consensus 246 i~~i~~~e~~~~~~~g~~~~GgM~~Kv~aa~~a~~~gv~~~v~I~~~~~l~~~l~g~~~GT~i~ 309 (310)
T 2we5_A 246 LTNVTVAELEEYKQAGHFAPGSMLPKIEAAIQFVESQPNKQAIITSLENLGSMSGDEIVGTVVT 309 (310)
T ss_dssp CCEEEHHHHHHHHHTTCSCTTTTHHHHHHHHHHHHHSTTCEEEEECSGGGGGCBTTBCCSEEEE
T ss_pred CCEEcHHHHHHHhhCCCCCCCChHHHHHHHHHHHHcCCCceEEECcHHHHHHHHcCCCCCeEEe
Confidence 9999999999997643 3678884 6667778898 8888752 22334688874
No 39
>4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A*
Probab=99.51 E-value=1.6e-14 Score=142.83 Aligned_cols=155 Identities=13% Similarity=0.121 Sum_probs=117.3
Q ss_pred HHHHHHHHHhcCCccccccceeEEEECC---CCCCC----CCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCccc
Q 020132 48 AQMLAAVVRKNGIDCKWMDTREVLIVNP---TSSNQ----VDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTT 120 (330)
Q Consensus 48 a~~~~~~L~~~Gi~a~~l~~~~~~~~~~---~~~g~----~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~ 120 (330)
...++..|.+.|++|+++.+.-+ .... ..+|. .+++. +.++.+|+ .|.|||++|+ +.+.+|++++
T Consensus 127 n~~lv~~L~~~G~~Avglsgg~~-~a~~~~~~d~g~vG~I~~v~~----~~I~~lL~--~G~IPVi~~~-g~~~~G~~~n 198 (464)
T 4ab7_A 127 NLKLVTALEQLGVRARPITSGVF-TADYLDKDKYKLVGNIKSVTK----EPIEASIK--AGALPILTSL-AETASGQMLN 198 (464)
T ss_dssp HHHHHHHHHHTTCCEEEECSSSE-EEEESCTTTTBSBEEEEEECC----HHHHHHHH--TTCEEEEESE-EECTTCBEEE
T ss_pred HHHHHHHHHhCCCCeEEECCCcE-EEEecCccccCCcCcccccCH----HHHHHHHH--CCcEEEEcCC-cCCCCCCEEE
Confidence 35678999999999999987433 2221 12331 24666 88999998 8999999998 8888898887
Q ss_pred ccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhHH-hhhhhhcc--ccccccc--ccceee--
Q 020132 121 LKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQE-AWEMSYFG--ANVLHPR--TIIPVM-- 193 (330)
Q Consensus 121 lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~e-~~~l~~~g--~~v~~p~--a~~~a~-- 193 (330)
+ ++|.+|+.+|.+|+|++++++|||+|||++ +++++++++++.| +.++...| .++|.|+ +++.|.
T Consensus 199 i---~~D~~Aa~lA~~L~Ad~Li~lTdV~GV~~~-----~~~~lI~~it~~e~~~~li~~~~~tgGM~pKl~aa~aa~~~ 270 (464)
T 4ab7_A 199 V---NADVAAGELARVFEPLKIVYLNEKGGIING-----STGEKISMINLDEEYDDLMKQSWVKYGTKLKIREIKELLDY 270 (464)
T ss_dssp C---CHHHHHHHHHHHHCCSEEEEEESSCSEECT-----TTCCEECEEEHHHHHHHHHTCSSCCHHHHHHHHHHHHHHTT
T ss_pred e---cHHHHHHHHHHHcCCCEEEEEecccccccC-----CCCcCCcccCHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHh
Confidence 6 589999999999999999999999999986 4578999999976 56666543 5679886 333333
Q ss_pred -ecccceEEeeec-------cccCceeEeeCCC
Q 020132 194 -RYDIPIVIRNIF-------NLSVPGIMICRPP 218 (330)
Q Consensus 194 -~~~i~v~i~~~~-------~~~~~GT~I~~~~ 218 (330)
+.+.++.|.+.. ..+..||.|.+..
T Consensus 271 v~~g~~v~I~~~~~ll~eLft~~g~GT~I~~~~ 303 (464)
T 4ab7_A 271 LPRSSSVAIINVQDLQKELFTDSGAGTMIRRGY 303 (464)
T ss_dssp SCTTCEEEEEESTTHHHHTTSSSTTSEEEECCC
T ss_pred cccCcEEEEecChHHHHHHhcCCCCceEEecCc
Confidence 347788888742 2345699998763
No 40
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=99.50 E-value=8.4e-15 Score=129.79 Aligned_cols=74 Identities=26% Similarity=0.384 Sum_probs=69.9
Q ss_pred cccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHHHHH
Q 020132 232 VKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREA 307 (330)
Q Consensus 232 ~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f~~~ 307 (330)
...+.+++++|+|++||.||+++||+++|+|++|+++||||.||+ +||++|||+|+++|.++|+++||+.|++.
T Consensus 106 ~~~v~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs--tSEi~IS~vV~~~d~~~Av~aLH~~F~L~ 179 (200)
T 4go7_X 106 FSQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TSEIRISVLCRDTELDKAVVALHEAFGLG 179 (200)
T ss_dssp CSEEEEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE--ECSSEEEEEEEGGGHHHHHHHHHHHHTC-
T ss_pred eeeEEEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE--ccCCEEEEEEeHHHHHHHHHHHHHHhCCC
Confidence 467888999999999999999999999999999999999999998 78999999999999999999999999753
No 41
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=99.46 E-value=4.5e-14 Score=139.67 Aligned_cols=157 Identities=14% Similarity=0.149 Sum_probs=117.8
Q ss_pred ccchhHHHHHHHHHHhcCCccccccceeEE--EECCCCCCC----CCCCchhhHHHHHHhhccCCCccEEEeeeeecCCC
Q 020132 42 HGELWSAQMLAAVVRKNGIDCKWMDTREVL--IVNPTSSNQ----VDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPD 115 (330)
Q Consensus 42 ~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~--~~~~~~~g~----~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~ 115 (330)
.| .++. .+++.|.+.|++|+++.+..+. ..+...+|. .+++. +.++.+|+ .|.|||++++ +.+..
T Consensus 133 lg-~vn~-~lv~aL~~~G~~Av~lsg~~~~a~~~~~~d~g~~G~I~~v~~----~~i~~lL~--~g~IpVi~p~-g~~~~ 203 (460)
T 3s6g_A 133 LT-QANL-ALVDAIRDAGGRAAAVPRGVFEADIVDADKLGRVGEPRHIHL----DLVGSAAR--AGQAAILACL-GETPD 203 (460)
T ss_dssp HH-HHHH-HHHHHHHHTTCCEEEECSSSEEEEESCTTTTBSEEEEEEECC----HHHHHHHH--TTCEEEEECE-EECTT
T ss_pred HH-HHHH-HHHHHHHhCCCCceEEecCeEEEEEecCcccCccCcceEEcH----HHHHHHHH--CCcEEEEECc-eECCC
Confidence 45 4554 4456999999999999985542 112223332 34666 88999998 8999999987 77888
Q ss_pred CCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhH-Hhhhhhhcc--ccccccc--ccc
Q 020132 116 NIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQ-EAWEMSYFG--ANVLHPR--TII 190 (330)
Q Consensus 116 g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~-e~~~l~~~g--~~v~~p~--a~~ 190 (330)
|+++++ ++|.+|+.+|.+|+|++++++|||+|||++ +++++++++.. |+.+++..+ .++|.|+ ++.
T Consensus 204 G~~~~i---~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~------~~~lI~~i~~~~e~~~l~~~~~~tGGM~~Kl~aa~ 274 (460)
T 3s6g_A 204 GTLVNI---NADVAVRALVHALQPYKVVFLTGTGGLLDE------DGDILSSINLATDFGDLMQADWVNGGMRLKLEEIK 274 (460)
T ss_dssp CCEEEE---CHHHHHHHHHHHHCCSEEEEECSSCSCBCT------TSSBCCEEEHHHHHHHHHHCSSSCHHHHHHHHHHH
T ss_pred CcEEec---CHHHHHHHHHHHcCCCEEEEEeCCccccCC------CCeecceeCcHHHHHHHHhcCCCCCcHHHHHHHHH
Confidence 988776 589999999999999999999999999985 36889999985 777777543 5788884 555
Q ss_pred eeeeccc-ceEEeeeccc----------cCceeEeeCC
Q 020132 191 PVMRYDI-PIVIRNIFNL----------SVPGIMICRP 217 (330)
Q Consensus 191 ~a~~~~i-~v~i~~~~~~----------~~~GT~I~~~ 217 (330)
.|.+ ++ ++.+.++..| +..||.|.+.
T Consensus 275 ~a~~-gv~~v~iv~g~~~~~Ll~eLft~~g~GT~i~~~ 311 (460)
T 3s6g_A 275 RLLD-DLPLSSSVSITRPSELARELFTHAGSGTLIRRG 311 (460)
T ss_dssp HHHH-TSCTTCEEEEECGGGHHHHHHSSCCSSEEEECC
T ss_pred HHHh-CCCcEEEEEeCCCcHHHHHHhcCCCCceEEEcC
Confidence 5554 55 4777776543 3469999875
No 42
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803}
Probab=99.44 E-value=2.9e-14 Score=133.87 Aligned_cols=123 Identities=14% Similarity=0.140 Sum_probs=92.1
Q ss_pred HHHHHhhccCCCccEEEeeeeec---CCCCCcc-cccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhh
Q 020132 90 KRLEKWFSQSPSNTIIATGFIAS---TPDNIPT-TLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVIL 165 (330)
Q Consensus 90 ~~i~~~l~~~~~~VpVv~G~i~~---~~~g~~~-~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i 165 (330)
+.|+.+|+ .|.|||++|+-|. ++++..+ +..++++|.+|+.+|.+|+|+.|+|+|||||||+ ||+ .|+++++
T Consensus 179 ~~I~~LL~--~G~IvI~aGGgGiPv~~~~~~~~G~~~~id~D~~Aa~lA~~L~AD~LIiLTDVdGVy~-dp~-~p~a~~I 254 (317)
T 3kzf_A 179 GVIKTLID--NNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACI-NYK-KPDERKL 254 (317)
T ss_dssp HHHHHHHH--TTCEEECCGGGCEEEEECSSCEEECSCCCCHHHHHHHHHHHHTCSCEEECCSSSSCEE-SSS-CSSCEEC
T ss_pred HHHHHHHH--CCCEEEEeCCCCCCcccCCCcccceEEeccHHHHHHHHHHHhCCCEEEEecCCCeeeC-CCC-CCCCeEC
Confidence 77888898 8899998865443 2233222 2235679999999999999999999999999999 999 5899999
Q ss_pred hhhhhHHhhhhhhcc---ccccccc--cccee-eecccceEEeeeccc-----cCceeEeeC
Q 020132 166 RTLSYQEAWEMSYFG---ANVLHPR--TIIPV-MRYDIPIVIRNIFNL-----SVPGIMICR 216 (330)
Q Consensus 166 ~~is~~e~~~l~~~g---~~v~~p~--a~~~a-~~~~i~v~i~~~~~~-----~~~GT~I~~ 216 (330)
++++++|+.+++..| .+.|.|+ ++..+ .+.+.+++|.|.... ...||+|.+
T Consensus 255 ~~it~~e~~~li~~g~~~~GGM~pKl~AA~~av~~gg~~v~I~s~~~l~~~l~G~~GT~I~~ 316 (317)
T 3kzf_A 255 EEIKLSEILALEKDGHFAAGSMGPKVRAAIEFTQATGKMSIITSLSTAVDALNGKCGTRIIK 316 (317)
T ss_dssp CEEEHHHHHHHHTTTSCC--CCHHHHHHHHHHHHHHCCCEEECCGGGHHHHHTTSSSEEEEC
T ss_pred cCcCHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCCCeEEEcchHHHHHHHCCCCCeEEec
Confidence 999999999987643 4688885 44444 434567999987422 126999875
No 43
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=99.44 E-value=7.5e-14 Score=119.08 Aligned_cols=74 Identities=23% Similarity=0.254 Sum_probs=64.3
Q ss_pred cccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHHHHH
Q 020132 232 VKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREA 307 (330)
Q Consensus 232 ~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f~~~ 307 (330)
...+++.+++++|+++|.+|+++||+++++|++|+ ||||.||+|++|+++|||+|+++|.++|++.||+.|+..
T Consensus 79 ~~~v~~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~Se~~is~vv~~~d~~~a~~~Lh~~f~~~ 152 (157)
T 3mah_A 79 IGDVTVDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGGSNYNVSVLVKAEDKKKALIALSNKLFNS 152 (157)
T ss_dssp TEEEEEEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECSSSSCEEEEEEGGGHHHHHHHHHHHHHC-
T ss_pred cCeEEEeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCCCCCEEEEEEcHHHHHHHHHHHHHHHhcc
Confidence 46788899999999999999999999999999999 999999999999999999999999999999999999864
No 44
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=99.36 E-value=3.1e-13 Score=118.09 Aligned_cols=73 Identities=26% Similarity=0.387 Sum_probs=69.4
Q ss_pred cccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHHHH
Q 020132 232 VKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFRE 306 (330)
Q Consensus 232 ~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f~~ 306 (330)
+..+.+++++++|++||.||+++||+++++|++|+++||||.||+ +|+.+|||+|+++|.++|+++||+.|+.
T Consensus 87 ~~~v~~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is--tSei~Is~vV~~~d~~~Av~aLH~~f~l 159 (181)
T 3s1t_A 87 FSQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TSEIRISVLCRDTELDKAVVALHEAFGL 159 (181)
T ss_dssp CSEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EETTEEEEEEEGGGHHHHHHHHHHHHTC
T ss_pred cceEEEeCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE--cCCCEEEEEEeHHHHHHHHHHHHHHHcC
Confidence 456888899999999999999999999999999999999999999 7899999999999999999999999964
No 45
>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV}
Probab=99.34 E-value=1e-13 Score=137.26 Aligned_cols=158 Identities=12% Similarity=0.133 Sum_probs=114.2
Q ss_pred ccchhHHHHHHHHHHhcCCccccccceeEE--EECCCCCC---C-CCCCchhhHHHHHHhhccCCCccEEEeeeeecCCC
Q 020132 42 HGELWSAQMLAAVVRKNGIDCKWMDTREVL--IVNPTSSN---Q-VDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPD 115 (330)
Q Consensus 42 ~GE~~sa~~~~~~L~~~Gi~a~~l~~~~~~--~~~~~~~g---~-~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~ 115 (330)
.| .++..+ ++.|++.|++|+++.+..+. ..++..+| + .+++. +.++.+|+ .|.|||+++. +.+..
T Consensus 136 ~g-~vn~~L-v~aL~~~G~~Av~lsg~~~~a~~~~~~d~g~~G~I~~v~~----~~i~~lL~--~g~IpVi~pv-g~~~~ 206 (467)
T 3s6k_A 136 FQ-ASNLKL-VEALQQNGARATSITGGVFEAEYLNRDTYGLVGEVKAVNL----APIEASLQ--AGSIPVITSL-GETPS 206 (467)
T ss_dssp HH-HHHHHH-HHHHHHHTCCBCCCCSSSBCCCBSCSSSSBSBBCCCCBCC----HHHHTHHH--HTCBCCCCSC-CCCSS
T ss_pred HH-HHHHHH-HHHHHhCCCCceEEcCccEEEEeccCcccCccceEEEEcH----HHHHHHHH--CCCEEEEECc-eECCC
Confidence 45 455544 55999999999999985441 11222333 2 34666 88999998 7999999953 44667
Q ss_pred CCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHhhhhhhhhhH-Hhhhhhhc--cccccccc--ccc
Q 020132 116 NIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQ-EAWEMSYF--GANVLHPR--TII 190 (330)
Q Consensus 116 g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a~~i~~is~~-e~~~l~~~--g~~v~~p~--a~~ 190 (330)
|+++++ ++|.+|+.+|.+|+|++++|+|||+|||++| ++++++++.. |+.+++.. +.++|.|+ ++.
T Consensus 207 G~~~~i---~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~~------~~lI~~i~~~~e~~~l~~~~~~tGGM~~Kl~aa~ 277 (467)
T 3s6k_A 207 GQILNV---NADFAANELVQELQPYKIIFLTGTGGLLDAE------GKLIDSINLSTEYDHLMQQPWINGGMRVKIEQIK 277 (467)
T ss_dssp SCCCBC---CHHHHHHHHHHHHCCSSCCCCCSSCSCCCSS------CCCCCCCCTTTTTHHHHTSSSCCSHHHHHHHHHH
T ss_pred CcEEec---CHHHHHHHHHHhcCCCEEEEEecccceeCCC------CCCccccChHHHHHHHHhcCCCCCchHHHHHHHH
Confidence 888776 5899999999999999999999999999854 6789999885 77777653 35788884 555
Q ss_pred eeeecccceEEeeeccc----------cCceeEeeCC
Q 020132 191 PVMRYDIPIVIRNIFNL----------SVPGIMICRP 217 (330)
Q Consensus 191 ~a~~~~i~v~i~~~~~~----------~~~GT~I~~~ 217 (330)
.|.+.+.++.+.++..| +..||.|.+.
T Consensus 278 ~a~~gv~~~~iv~g~~~~~Ll~eLft~~g~GT~i~~~ 314 (467)
T 3s6k_A 278 DLLDRLPLESSVSITRPADLAKELFTHKGSGTLVRRG 314 (467)
T ss_dssp HHHTTSCSSCCBCCCCTTTHHHHHHSSCTTSCCBCCC
T ss_pred HHHhCCCcEEEEEeCCchHHHHHHhcCCCcceEEeCC
Confidence 55553324666666443 3469999765
No 46
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=99.33 E-value=5.2e-13 Score=114.89 Aligned_cols=72 Identities=28% Similarity=0.433 Sum_probs=67.4
Q ss_pred cceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHHHHH
Q 020132 234 GFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREA 307 (330)
Q Consensus 234 ~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f~~~ 307 (330)
.+.+.+++++|++||.+|+++||+++++|++|+++||||.||+ +|+.+|||+|+++|.++|+++||+.|+..
T Consensus 88 ~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is--~Se~~is~vv~~~d~~~Av~~Lh~~f~~~ 159 (167)
T 2dt9_A 88 EAILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIA--TSEVRISVIIPAEYAEAALRAVHQAFELD 159 (167)
T ss_dssp EEEEECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEE--ECSSEEEEEEEGGGHHHHHHHHHHHTC--
T ss_pred cEEEeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEE--ccCCEEEEEEeHHHHHHHHHHHHHHHcCC
Confidence 6778899999999999999999999999999999999999998 78999999999999999999999998743
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=99.28 E-value=2e-12 Score=128.62 Aligned_cols=75 Identities=36% Similarity=0.605 Sum_probs=71.8
Q ss_pred cccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHHHH
Q 020132 232 VKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFRE 306 (330)
Q Consensus 232 ~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f~~ 306 (330)
+..+.+.+|+|+|++||.+|+++||+++++|++|+++||||.||+|++|+.+|||+|+++|.++|+++||+.|+.
T Consensus 395 ~~~v~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~misqgtSe~~Is~vV~~~d~~~Av~aLh~~f~~ 469 (473)
T 3c1m_A 395 IRDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIAQGSSEVNISFVIDEKDLLNCVRKLHEKFIE 469 (473)
T ss_dssp EEEEEEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEEEESSCSSEEEEEEEGGGHHHHHHHHHHHHTT
T ss_pred cceEEEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEEecCCCCceEEEEEcHHHHHHHHHHHHHHHhc
Confidence 456888899999999999999999999999999999999999999999999999999999999999999999974
No 48
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=99.28 E-value=1.4e-12 Score=113.42 Aligned_cols=74 Identities=28% Similarity=0.453 Sum_probs=69.7
Q ss_pred cccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHHHHH
Q 020132 232 VKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREA 307 (330)
Q Consensus 232 ~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f~~~ 307 (330)
+..+.+.+++++|+++|.+|++.||+++++|++|+++||||.||+ +|+.+|||+|+++|.++|+++||+.|+.+
T Consensus 86 ~~~v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is--tSe~~Is~vV~~~d~~~Av~~Lh~~F~l~ 159 (178)
T 2dtj_A 86 WTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS--TSEIRISVLIREDDLDAAARALHEQFQLG 159 (178)
T ss_dssp CSEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EETTEEEEEEEGGGHHHHHHHHHHHHTCC
T ss_pred CCeEEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE--cCCCeEEEEEeHHHHHHHHHHHHHHHccC
Confidence 456888999999999999999999999999999999999999998 78999999999999999999999999754
No 49
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=99.20 E-value=1.6e-11 Score=125.36 Aligned_cols=73 Identities=30% Similarity=0.441 Sum_probs=69.3
Q ss_pred ccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHHHHH
Q 020132 233 KGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREA 307 (330)
Q Consensus 233 ~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f~~~ 307 (330)
..+.+++++|+||+||.||+++||+++|+|++|+++||||.||+ +||++|||+|+++|.++|+++||+.|+..
T Consensus 519 ~~v~~~~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis--tSEi~Is~vV~~~~~~~Av~alh~~F~l~ 591 (600)
T 3l76_A 519 AAIVVNKAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA--TSEIKISCVVPQDRGVDALKAAHSAFNLA 591 (600)
T ss_dssp CEEEEECCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE--ECSSEEEEEEEGGGHHHHHHHHHHHTTTT
T ss_pred ceEEEeCCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE--cCCceEEEEEeHHHHHHHHHHHHHHhCCC
Confidence 45888899999999999999999999999999999999999999 89999999999999999999999999643
No 50
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=99.20 E-value=1.3e-11 Score=106.11 Aligned_cols=73 Identities=29% Similarity=0.384 Sum_probs=68.7
Q ss_pred cccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHHHH
Q 020132 232 VKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFRE 306 (330)
Q Consensus 232 ~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f~~ 306 (330)
+..++..+++++|+++|.+|.+.||+++++|++|+++||||.|++ +|+.++||+|+++|.+++++.||+.|+.
T Consensus 94 ~~~i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~is--tse~~is~vv~~~d~~~av~~Lh~~f~l 166 (167)
T 2re1_A 94 AASIDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIS--TSEIKVSVLIDEKYMELATRVLHKAFNL 166 (167)
T ss_dssp CSEEEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEE--ECSSEEEEEEEGGGHHHHHHHHHHHTTC
T ss_pred CceEEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEE--cccCEEEEEEeHHHHHHHHHHHHHHhcC
Confidence 456788899999999999999999999999999999999999998 7899999999999999999999999863
No 51
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans}
Probab=99.10 E-value=2.6e-11 Score=115.15 Aligned_cols=119 Identities=15% Similarity=0.177 Sum_probs=85.8
Q ss_pred HHHHHhhccCCCccEEEeee--eec-----CCCCCcccccccCcchhHHHHHHHHhhceeEEEeecccccccCccchhHh
Q 020132 90 KRLEKWFSQSPSNTIIATGF--IAS-----TPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEA 162 (330)
Q Consensus 90 ~~i~~~l~~~~~~VpVv~G~--i~~-----~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~~~tdv~Gv~~~dP~~~~~a 162 (330)
+.++.+++ .+.|||..|. ++. +..|...+ ++.|.+|+.+|.+++|+.|+|+|||||||+.+|+ |++
T Consensus 194 ~~I~~L~~--~g~Ivi~~ggggipv~~~~~~~~G~~~v---id~D~~Aa~lA~~l~Ad~LiiLTdV~gv~~~~~~--~~~ 266 (332)
T 4axs_A 194 DAIKQNVN--NGCVCIVGGGGGIPTIIQDNQYIGVDGV---IDKDFALAKIADAVNADIFVVLTAVDYVYVDFNK--PTQ 266 (332)
T ss_dssp HHHHHHHH--TTCEEECCGGGCEEEEESSSCEEECSSC---CCHHHHHHHHHHHTTCSEEEEECSCSSCEESTTS--TTC
T ss_pred HHHHHhhc--CCeEEEecccCCCCccccCCcccCceee---echHHHHHHHHHHhCCceEEEEecCCceEcCCCC--cch
Confidence 67788887 7888776442 111 11233333 4689999999999999999999999999998876 778
Q ss_pred hhhhhhhhHHhhhhhhcc---ccccccc--ccceeeeccc--ceEEeeeccc-----cCceeEee
Q 020132 163 VILRTLSYQEAWEMSYFG---ANVLHPR--TIIPVMRYDI--PIVIRNIFNL-----SVPGIMIC 215 (330)
Q Consensus 163 ~~i~~is~~e~~~l~~~g---~~v~~p~--a~~~a~~~~i--~v~i~~~~~~-----~~~GT~I~ 215 (330)
+++++++.+|+.++...| .+.|.|+ |+..+.+.+. .+.|.+..+. ...||+|.
T Consensus 267 ~~i~~it~~e~~~~~~~g~~~~GgM~pKv~Aa~~~v~~g~g~~~iI~~~~~~~~~l~g~~GT~Iv 331 (332)
T 4axs_A 267 KALKTVDVKALNNFINQDQFAKGSMLPKIKAAMGFVNGHPNRSAIIADLSKVEDALKGLSGTKII 331 (332)
T ss_dssp EECSSCBHHHHHHHHHTTCSCTTTTHHHHHHHHHHHTTCTTCEEEEECSTTHHHHTTTSSSEEEB
T ss_pred hhcccCCHHHHHHHHHCCCcCcCCcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHCCCCCcEEe
Confidence 999999999999998644 5779995 5555555554 4556543211 13589885
No 52
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=99.10 E-value=4.9e-11 Score=116.99 Aligned_cols=73 Identities=29% Similarity=0.457 Sum_probs=69.1
Q ss_pred cccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHHHH
Q 020132 232 VKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFRE 306 (330)
Q Consensus 232 ~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f~~ 306 (330)
+..+.+.+|+++|++||.+|+++||+++++|++|+++||||.||+ +|+.+|||+|+++|.++|+++||+.|+.
T Consensus 335 ~~~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is--~Se~~is~vV~~~d~~~Av~~Lh~~f~~ 407 (421)
T 3ab4_A 335 WTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS--TSEIRISVLIREDDLDAAARALHEQFQL 407 (421)
T ss_dssp CSEEEEECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEE--EETTEEEEEEEGGGHHHHHHHHHHHTTC
T ss_pred CceEEEeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEEE--cCCCeEEEEEeHHHHHHHHHHHHHHHhc
Confidence 346888999999999999999999999999999999999999998 7899999999999999999999999974
No 53
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=98.89 E-value=7.7e-10 Score=97.85 Aligned_cols=83 Identities=29% Similarity=0.421 Sum_probs=72.1
Q ss_pred ccCCcccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCc-----ceeeeecchhhHHHHHHHHHH
Q 020132 228 IDSPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSE-----HSVCFAVPEKEVKAVAEALES 302 (330)
Q Consensus 228 ~~~~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se-----~sIS~vv~~~d~~~av~~Lh~ 302 (330)
++..+++|++++|.++|++.| |.+.||+++++|+.|+++||+|+||+|+.|+ ..++|.++++|..++.+.|.+
T Consensus 22 E~~vVtGIa~~~~~a~Iti~g--~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d~~~~~~~l~~ 99 (200)
T 4go7_X 22 EDPILTGVAHDRSEAKVTIVG--LPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGPAAVEKLDS 99 (200)
T ss_dssp CSCEEEEEEEECSEEEEEEEE--EECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGGHHHHHHHHHT
T ss_pred ccCcEEEEEccCCEEEEEEec--CCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhhHHHHHHHHHH
Confidence 345789999999999999986 9999999999999999999999999998764 468999999999999999976
Q ss_pred HHHHHhccCcc
Q 020132 303 KFREALNAGRL 313 (330)
Q Consensus 303 ~f~~~~~~~~i 313 (330)
+..++....+
T Consensus 100 -~~~~~~~~~v 109 (200)
T 4go7_X 100 -LRNEIGFSQL 109 (200)
T ss_dssp -THHHHCCSEE
T ss_pred -HHhhhceeeE
Confidence 5566655544
No 54
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=98.89 E-value=1.1e-09 Score=93.93 Aligned_cols=78 Identities=27% Similarity=0.373 Sum_probs=70.4
Q ss_pred CCcccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCC-----cceeeeecchhhHHHHHHHHHHHH
Q 020132 230 SPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS-----EHSVCFAVPEKEVKAVAEALESKF 304 (330)
Q Consensus 230 ~~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~s-----e~sIS~vv~~~d~~~av~~Lh~~f 304 (330)
..+++|+.++|+++|+++| +.+.||+++++|+.|+++||+|+||+|+.+ +.+++|+++++|.+++.+.|++ +
T Consensus 5 ~~v~gIa~~~~~a~Itv~g--~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~~~a~~~L~~-~ 81 (167)
T 2dt9_A 5 KAVTGVALDLDHAQIGLIG--IPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFAQEALEALEP-V 81 (167)
T ss_dssp CCEEEEEEECSEEEEEEEE--EECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGHHHHHHHHHH-H
T ss_pred CceeEEEEeCCEEEEEEec--CCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHHHHHHHHHHH-H
Confidence 4589999999999999997 788899999999999999999999999876 7899999999999999999987 5
Q ss_pred HHHhcc
Q 020132 305 REALNA 310 (330)
Q Consensus 305 ~~~~~~ 310 (330)
..+++.
T Consensus 82 ~~~~~~ 87 (167)
T 2dt9_A 82 LAEIGG 87 (167)
T ss_dssp HHHHCC
T ss_pred HHHhCC
Confidence 566654
No 55
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=98.85 E-value=1.7e-09 Score=94.18 Aligned_cols=82 Identities=29% Similarity=0.437 Sum_probs=71.6
Q ss_pred cCCcccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCc-----ceeeeecchhhHHHHHHHHHHH
Q 020132 229 DSPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSE-----HSVCFAVPEKEVKAVAEALESK 303 (330)
Q Consensus 229 ~~~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se-----~sIS~vv~~~d~~~av~~Lh~~ 303 (330)
...+++|+.++|+++|+|.| |.+.||+++++|+.|+++||+|+||+|+.++ .+|+|++++++.+++.+.|++
T Consensus 4 ~~~V~gIa~~~~~~~Iti~~--~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~~~a~~~L~~- 80 (181)
T 3s1t_A 4 DPILTGVAHDRSEAKVTIVG--LPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGPAAVEKLDS- 80 (181)
T ss_dssp CCEEEEEEEECSEEEEEEEE--EESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTHHHHHHHHHH-
T ss_pred CCcEEEEEecCCEEEEEEec--CCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHHHHHHHHHHH-
Confidence 35689999999999999996 8999999999999999999999999997765 589999999999999998987
Q ss_pred HHHHhccCcc
Q 020132 304 FREALNAGRL 313 (330)
Q Consensus 304 f~~~~~~~~i 313 (330)
+..++....+
T Consensus 81 ~~~el~~~~v 90 (181)
T 3s1t_A 81 LRNEIGFSQL 90 (181)
T ss_dssp THHHHCCSEE
T ss_pred HHHhcCcceE
Confidence 5566654443
No 56
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=98.78 E-value=1.5e-09 Score=92.21 Aligned_cols=73 Identities=16% Similarity=0.201 Sum_probs=63.8
Q ss_pred ccCCcccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhh-HHHHHHHHHH
Q 020132 228 IDSPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKE-VKAVAEALES 302 (330)
Q Consensus 228 ~~~~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d-~~~av~~Lh~ 302 (330)
+...+++|+.++|+++|++.|.+|.+.||+.+++|+.|+++||+|+||+| |+.+|||++++.+ +.++++.|++
T Consensus 5 ~~~~v~gIa~~~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~~--s~~~Isf~v~~~~~~~~il~~l~~ 78 (157)
T 3mah_A 5 EKDCIKAVAAKDGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVAT--SEVGVSLTIDNDKNLPDIVRALSD 78 (157)
T ss_dssp --CCCCEEEEEEEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEEC--CSSEEEEEESCCTTHHHHHHHHTT
T ss_pred CCCceEEEEecCCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEEe--cCCEEEEEECChHHHHHHHHHHhc
Confidence 34678999999999999999999999999999999999999999999995 5789999999987 6666666654
No 57
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=98.72 E-value=8.5e-09 Score=88.44 Aligned_cols=79 Identities=34% Similarity=0.473 Sum_probs=67.5
Q ss_pred cCCcccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCC---cceeeeecchhhHHHHHHHHHHHHH
Q 020132 229 DSPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS---EHSVCFAVPEKEVKAVAEALESKFR 305 (330)
Q Consensus 229 ~~~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~s---e~sIS~vv~~~d~~~av~~Lh~~f~ 305 (330)
...+++|+.++|+++|++.| |.+.||+++++|+.|+++||+|+||+|+.+ +.+++|+|++++.+++.+.|++ +.
T Consensus 13 ~~~V~gIa~~~~~~~i~v~~--~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~~~~~a~~~l~~-~~ 89 (167)
T 2re1_A 13 RAAVTGIAFDKNQARINVRG--VPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSE-RQ 89 (167)
T ss_dssp --CCCEEEEECCCEEEEEEE--EECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGGGHHHHHHHHHH-SS
T ss_pred CCCeEEEEecCCEEEEEEec--CCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEechHHHHHHHHHHH-HH
Confidence 34699999999999999998 889999999999999999999999999866 7899999999999999988877 44
Q ss_pred HHhcc
Q 020132 306 EALNA 310 (330)
Q Consensus 306 ~~~~~ 310 (330)
.+++.
T Consensus 90 ~~l~~ 94 (167)
T 2re1_A 90 DSIGA 94 (167)
T ss_dssp TTTTC
T ss_pred HHcCC
Confidence 44443
No 58
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=98.49 E-value=4.6e-08 Score=84.75 Aligned_cols=77 Identities=29% Similarity=0.404 Sum_probs=67.2
Q ss_pred CCcccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCC-----cceeeeecchhhHHHHHHHHHHHH
Q 020132 230 SPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS-----EHSVCFAVPEKEVKAVAEALESKF 304 (330)
Q Consensus 230 ~~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~s-----e~sIS~vv~~~d~~~av~~Lh~~f 304 (330)
..+++|+.++|+++|+|.+ +.+.||+++++|+.|+++||+|+||+|+.+ +.+|+|+++.+|.+++.+.|++ +
T Consensus 4 ~~V~gIa~~~~~~~Itv~~--~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~d~~~a~~~l~~-~ 80 (178)
T 2dtj_A 4 AVLTGVATDKSEAKVTVLG--ISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDGRRAMEILKK-L 80 (178)
T ss_dssp CEEEEEEEECSEEEEEEEE--EECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHHHHHHHHHHHHT-T
T ss_pred CcEEEEEecCCEEEEEEec--CCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccccHHHHHHHHHH-H
Confidence 4589999999999999986 678899999999999999999999999855 7889999999999999888876 4
Q ss_pred HHHhc
Q 020132 305 REALN 309 (330)
Q Consensus 305 ~~~~~ 309 (330)
..++.
T Consensus 81 ~~~~~ 85 (178)
T 2dtj_A 81 QVQGN 85 (178)
T ss_dssp TTTTT
T ss_pred HHhcC
Confidence 44444
No 59
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=98.12 E-value=2.7e-06 Score=85.15 Aligned_cols=62 Identities=19% Similarity=0.374 Sum_probs=57.9
Q ss_pred CCcccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhH
Q 020132 230 SPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEV 293 (330)
Q Consensus 230 ~~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~ 293 (330)
..+++|+..+|+++|++.|.+|.+.+|+.+++|+.|+++||+|+||+| |+.+|||+|++++.
T Consensus 330 ~~v~gIa~~~~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~s--se~sis~~v~~~~~ 391 (510)
T 2cdq_A 330 SILTSIVLKRNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVAT--SEVSISLTLDPSKL 391 (510)
T ss_dssp CCEEEEEEEEEEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEE--ETTEEEEEECCGGG
T ss_pred cccccccccCCeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEEe--CCCeEEEEEechHh
Confidence 358999999999999999999999999999999999999999999985 59999999998874
No 60
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.00 E-value=4.8e-06 Score=69.06 Aligned_cols=61 Identities=21% Similarity=0.361 Sum_probs=53.4
Q ss_pred eEEeeecccccCCCCchhhhhhhhcccCccE-EEEeccCCcceeeeecchhhHHHHHHHHHHH
Q 020132 242 ALVNVEGTGMAGVPGTANAIFGAVKDVGANV-IMISQASSEHSVCFAVPEKEVKAVAEALESK 303 (330)
Q Consensus 242 a~IsvvG~~~~~~~gv~a~if~~L~~~gI~I-~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~ 303 (330)
...+++|.+|+++||+++++|+.|+++|||| .|++.. ++...+++++.+|.++|++.||+.
T Consensus 70 ~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~-~~~~~~~~i~~~d~~~A~~~L~~~ 131 (144)
T 2f06_A 70 NITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA-NNNVANVVIRPSNMDKCIEVLKEK 131 (144)
T ss_dssp EEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE-ETTEEEEEEEESCHHHHHHHHHHT
T ss_pred eeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc-cCCcEEEEEEeCCHHHHHHHHHHc
Confidence 3447888899999999999999999999999 566642 678899999999999999999985
No 61
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=97.82 E-value=2.5e-06 Score=84.14 Aligned_cols=62 Identities=21% Similarity=0.273 Sum_probs=57.3
Q ss_pred CCcccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhH
Q 020132 230 SPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEV 293 (330)
Q Consensus 230 ~~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~ 293 (330)
..+++|+.++|+++|++.|.+|...+|+.+++|+.|++++|+|+||+| |+.+|||++++++.
T Consensus 297 ~~v~gIa~~~~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~s--s~~sis~~v~~~~~ 358 (449)
T 2j0w_A 297 PLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITT--SEVSVALTLDTTGS 358 (449)
T ss_dssp CSEEEEEEEEEEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEEE--ETTEEEEEECCCCC
T ss_pred cccccceeeCCEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEEe--CCCeEEEEEecccc
Confidence 468999999999999999999999999999999999999999999995 58999999998653
No 62
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=97.02 E-value=0.00031 Score=69.09 Aligned_cols=79 Identities=13% Similarity=0.263 Sum_probs=67.4
Q ss_pred CcccceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHHHHHHhcc
Q 020132 231 PVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREALNA 310 (330)
Q Consensus 231 ~~~~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~f~~~~~~ 310 (330)
.+++|+..+|+++|++.|.+|.+.+|+.+++|+.|++++|+|+||+++ +.+|||++++++..+.++.+.+.+..++..
T Consensus 288 ~v~gIa~~~~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~~~--~~~is~~V~~~d~~~~~~~~~~el~~~~~~ 365 (446)
T 3tvi_A 288 TITGIAGKKNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSG--VDSVSLVIEDCKLDGKCDKIIEEIKKQCNP 365 (446)
T ss_dssp CCCEEEEEEEEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBCEE--TTEEEEEEEHHHHTTTHHHHHHHHHHHSCC
T ss_pred ceEEEEecCCEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEecC--CCEEEEEEecchHHHHHHHHHHHHHHhcCC
Confidence 689999999999999999999999999999999999999999999854 789999999999875555555556555543
Q ss_pred C
Q 020132 311 G 311 (330)
Q Consensus 311 ~ 311 (330)
.
T Consensus 366 ~ 366 (446)
T 3tvi_A 366 D 366 (446)
T ss_dssp S
T ss_pred C
Confidence 3
No 63
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=95.83 E-value=0.0089 Score=48.97 Aligned_cols=50 Identities=10% Similarity=0.122 Sum_probs=39.8
Q ss_pred ccCCCCchhhhhhhhcccCccEEEEeccCC-cce-eeeecchhhHHHHHHHHHH
Q 020132 251 MAGVPGTANAIFGAVKDVGANVIMISQASS-EHS-VCFAVPEKEVKAVAEALES 302 (330)
Q Consensus 251 ~~~~~gv~a~if~~L~~~gI~I~~Isq~~s-e~s-IS~vv~~~d~~~av~~Lh~ 302 (330)
+.+.||.++++|+.|+++||||++|+|+.+ +.. ++|. ..|.+++.+.|++
T Consensus 13 v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~--~~d~~~a~~~L~~ 64 (144)
T 2f06_A 13 LENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGI--VSDPDKAYKALKD 64 (144)
T ss_dssp ECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEE--ESCHHHHHHHHHH
T ss_pred ecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEE--eCCHHHHHHHHHH
Confidence 678899999999999999999999998643 323 4455 4677888888775
No 64
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=94.68 E-value=0.082 Score=43.27 Aligned_cols=67 Identities=10% Similarity=0.183 Sum_probs=56.2
Q ss_pred cceeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHHH
Q 020132 234 GFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESK 303 (330)
Q Consensus 234 ~i~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~~ 303 (330)
++........|+|.|..-.+..|+++.+-+.|+++||.+..|| +-.+.- ++|++++.++|+++|.+.
T Consensus 55 ~~~~~~~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~iS--ty~tD~-IlVp~~~~~~Ai~aL~~~ 121 (134)
T 1zhv_A 55 DVRVDPGWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVS--TFDGDH-LLVRSNDLEKTADLLANA 121 (134)
T ss_dssp TSEEEEEEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEE--CSSCEE-EEEEGGGHHHHHHHHHHT
T ss_pred CCccCCCeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEE--eccccE-EEEeHHHHHHHHHHHHHc
Confidence 3466778889999887566788999999999999999999998 434444 778999999999999875
No 65
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=92.73 E-value=0.15 Score=41.60 Aligned_cols=64 Identities=14% Similarity=0.173 Sum_probs=51.6
Q ss_pred eeecceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhHHHHHHHHHH
Q 020132 236 ATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALES 302 (330)
Q Consensus 236 ~~~~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~~~av~~Lh~ 302 (330)
........|++.|..-.+-.|+.+.+-+.|+++||.+..|| +-.+. -++|++++.++|+++|.+
T Consensus 66 ~~~~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~iS--ty~tD-hIlVp~~~~~~A~~~L~~ 129 (133)
T 1zvp_A 66 ESSALFSLITLTVHSSLEAVGLTAAFATKLAEHGISANVIA--GYYHD-HIFVQKEKAQQALQALGE 129 (133)
T ss_dssp CCCSCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEE--CSSCE-EEEEEGGGHHHHHHHHTT
T ss_pred ccCCCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEEE--ecccc-EEEEehhHHHHHHHHHHH
Confidence 44567888888886556788999999999999999999998 33444 477899999999999864
No 66
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=92.21 E-value=0.099 Score=45.13 Aligned_cols=84 Identities=19% Similarity=0.190 Sum_probs=46.5
Q ss_pred cceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCc----------ceeeeecchhhHHHHHHHHHHHHHHHh
Q 020132 239 DNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSE----------HSVCFAVPEKEVKAVAEALESKFREAL 308 (330)
Q Consensus 239 ~nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se----------~sIS~vv~~~d~~~av~~Lh~~f~~~~ 308 (330)
.+..+|+|.|. +.||+++++.+.|+++|+||.-+.|.+.. ..+.+-++...-....+.|... ..++
T Consensus 91 ~~~~iltv~g~---DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~~~~~~~l~~~l~~~-a~~l 166 (195)
T 2nyi_A 91 TREYELYVEGP---DSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFPFPLYQEVVTALSRV-EEEF 166 (195)
T ss_dssp EEEEEEEEEEE---CCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEEGGGHHHHHHHHHHH-HHHH
T ss_pred CcEEEEEEEeC---CCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcCCCccHHHHHHHHHH-HHHc
Confidence 35678999985 58999999999999999999999986432 2333333321112222222221 1222
Q ss_pred -ccCcccccCCCCCCCCCc
Q 020132 309 -NAGRLSQHSSSSWPENGE 326 (330)
Q Consensus 309 -~~~~i~~~~~~~~~~~~~ 326 (330)
-.-++++++..+.|++..
T Consensus 167 ~~di~~~~~~~~~~~~~~~ 185 (195)
T 2nyi_A 167 GVDIDLEEVVEGEDSEEDD 185 (195)
T ss_dssp TCEEEEEECC---------
T ss_pred CeEEEEEECcccccCcccC
Confidence 233678888887777654
No 67
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=88.59 E-value=0.61 Score=34.36 Aligned_cols=59 Identities=20% Similarity=0.309 Sum_probs=42.2
Q ss_pred eeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCC--c--ceeeeecch-hhHHHHHHHHHH
Q 020132 241 LALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS--E--HSVCFAVPE-KEVKAVAEALES 302 (330)
Q Consensus 241 ia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~s--e--~sIS~vv~~-~d~~~av~~Lh~ 302 (330)
...|++.|. +.||+++++.+.|+++|+||..+.|... . ..+.+-++. .+.+++.+.|.+
T Consensus 5 ~~~l~v~~~---DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~~~~~l~~l~~~L~~ 68 (91)
T 1zpv_A 5 KAIITVVGK---DKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSDEKQDFTYLRNEFEA 68 (91)
T ss_dssp EEEEEEEES---CCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHH
T ss_pred eEEEEEEEC---CCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeCCCCCHHHHHHHHHH
Confidence 466788764 6899999999999999999999987542 2 333333343 456666666654
No 68
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=85.23 E-value=1 Score=38.22 Aligned_cols=60 Identities=20% Similarity=0.310 Sum_probs=42.3
Q ss_pred ceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCC--cceeeeecchhhHHHHHHHHHHHH
Q 020132 240 NLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS--EHSVCFAVPEKEVKAVAEALESKF 304 (330)
Q Consensus 240 nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~s--e~sIS~vv~~~d~~~av~~Lh~~f 304 (330)
+...|+|.|. ++||+++++.+.|+++|+||.-+.|... ...+.+.+.... .....|.+.|
T Consensus 5 ~~~~itv~~~---DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~--~~~~~l~~~L 66 (192)
T 1u8s_A 5 QHLVITAVGT---DRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSP--SNITRVETTL 66 (192)
T ss_dssp EEEEEEEEEE---CCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECH--HHHHHHHHHH
T ss_pred cEEEEEEEcC---CCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCC--CCHHHHHHHH
Confidence 3567889874 6899999999999999999999988643 455555554332 2344444444
No 69
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=85.20 E-value=0.64 Score=39.24 Aligned_cols=52 Identities=17% Similarity=0.296 Sum_probs=36.7
Q ss_pred ccCCCCchhhhhhhhcccCccEEEEeccCCc----ceeeeecchhhHHHHHHHHHHHH
Q 020132 251 MAGVPGTANAIFGAVKDVGANVIMISQASSE----HSVCFAVPEKEVKAVAEALESKF 304 (330)
Q Consensus 251 ~~~~~gv~a~if~~L~~~gI~I~~Isq~~se----~sIS~vv~~~d~~~av~~Lh~~f 304 (330)
..+.||+++++...|+++|+||..++-+.++ ..+.++++.+ ++.++.|.+.+
T Consensus 11 veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d--~~~leql~kQL 66 (165)
T 2pc6_A 11 MENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGP--DEIVEQITKQL 66 (165)
T ss_dssp EECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEEC--HHHHHHHHHHH
T ss_pred EeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEecc--HHHHHHHHHHh
Confidence 4578999999999999999999987765443 4567777633 33444444433
No 70
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=85.14 E-value=3.7 Score=34.71 Aligned_cols=79 Identities=14% Similarity=0.182 Sum_probs=53.5
Q ss_pred cceeeeccch--------hHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEe
Q 020132 36 TDFVVGHGEL--------WSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIAT 107 (330)
Q Consensus 36 ~~~v~~~GE~--------~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~ 107 (330)
+..++++|.- -++..+++.|++.|+.... ..++.| |.+.+.+.++++++ ...+.|++
T Consensus 5 ~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~-----~~iv~D--------d~~~I~~~l~~a~~--~~DlVitt 69 (172)
T 3kbq_A 5 NASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRR-----GFVVMD--------DLDEIGWAFRVALE--VSDLVVSS 69 (172)
T ss_dssp EEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEE-----EEEECS--------CHHHHHHHHHHHHH--HCSEEEEE
T ss_pred EEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEE-----EEEeCC--------CHHHHHHHHHHHHh--cCCEEEEc
Confidence 3456666643 3677899999999987543 233333 34556677777776 45778888
Q ss_pred eeeecCCCCCcccccccCcchhHHHHHHHHhhc
Q 020132 108 GFIASTPDNIPTTLKRDGSDFSAAIMGALLRAH 140 (330)
Q Consensus 108 G~i~~~~~g~~~~lgrggsD~~A~~lA~~l~A~ 140 (330)
|-.+.+ -.|.+.-.+|.+++.+
T Consensus 70 GG~g~~-----------~~D~T~ea~a~~~~~~ 91 (172)
T 3kbq_A 70 GGLGPT-----------FDDMTVEGFAKCIGQD 91 (172)
T ss_dssp SCCSSS-----------TTCCHHHHHHHHHTCC
T ss_pred CCCcCC-----------cccchHHHHHHHcCCC
Confidence 854432 2499999999999954
No 71
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=85.05 E-value=0.74 Score=38.78 Aligned_cols=51 Identities=12% Similarity=0.279 Sum_probs=36.0
Q ss_pred ccCCCCchhhhhhhhcccCccEEEEeccCCc----ceeeeecchh--hHHHHHHHHH
Q 020132 251 MAGVPGTANAIFGAVKDVGANVIMISQASSE----HSVCFAVPEK--EVKAVAEALE 301 (330)
Q Consensus 251 ~~~~~gv~a~if~~L~~~gI~I~~Isq~~se----~sIS~vv~~~--d~~~av~~Lh 301 (330)
..+.||+++++...|++.|+||..++-+.++ ..+.+.+..+ .++++.+.|+
T Consensus 10 v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~d~~~leqI~kqL~ 66 (164)
T 2f1f_A 10 LENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLH 66 (164)
T ss_dssp EECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESCHHHHHHHHHHHH
T ss_pred EeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEeccHHHHHHHHHHHc
Confidence 4578999999999999999999887765443 4566777632 3344444443
No 72
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=82.16 E-value=2.3 Score=30.64 Aligned_cols=56 Identities=14% Similarity=0.232 Sum_probs=37.0
Q ss_pred eEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCCc--ceeeeecch---hhHHHHHHHH
Q 020132 242 ALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSE--HSVCFAVPE---KEVKAVAEAL 300 (330)
Q Consensus 242 a~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~se--~sIS~vv~~---~d~~~av~~L 300 (330)
..|.+. ..+.||+++++.+.|++.|+||..+.+.... ..+.+.+.- .+..++++.|
T Consensus 6 ~~l~v~---~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~~~~~l~~l~~~L 66 (88)
T 2ko1_A 6 AGIRIV---GEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVKNTDKLTTLMDKL 66 (88)
T ss_dssp EEEEEE---EECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHH
T ss_pred EEEEEE---EECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEECCHHHHHHHHHHH
Confidence 345555 3478999999999999999999988875432 234444433 3444444444
No 73
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=81.85 E-value=1.3 Score=38.37 Aligned_cols=52 Identities=19% Similarity=0.267 Sum_probs=37.2
Q ss_pred ccCCCCchhhhhhhhcccCccEEEEeccCCc----ceeeeecchhhHHHHHHHHHHHH
Q 020132 251 MAGVPGTANAIFGAVKDVGANVIMISQASSE----HSVCFAVPEKEVKAVAEALESKF 304 (330)
Q Consensus 251 ~~~~~gv~a~if~~L~~~gI~I~~Isq~~se----~sIS~vv~~~d~~~av~~Lh~~f 304 (330)
+.+.||+++|+...|++.|+||..++-+.++ ..++++++.. +++++.|.+.+
T Consensus 36 VeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~--e~~ieqL~kQL 91 (193)
T 2fgc_A 36 VHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD--DKTIEQIEKQA 91 (193)
T ss_dssp EECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC--TTHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC--HHHHHHHHHHh
Confidence 5689999999999999999999988765332 4566777633 33444444443
No 74
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=76.76 E-value=2.2 Score=36.07 Aligned_cols=37 Identities=14% Similarity=0.045 Sum_probs=31.6
Q ss_pred ceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccC
Q 020132 240 NLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQAS 279 (330)
Q Consensus 240 nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~ 279 (330)
...+|++.|. +.||+++++.+.|+++|+||..+.|.+
T Consensus 92 ~~~~l~v~~~---D~~Gil~~v~~~l~~~~~nI~~~~~~t 128 (192)
T 1u8s_A 92 YTVEVYVESD---DKLGLTEKFTQFFAQRQIGMASLSAQT 128 (192)
T ss_dssp EEEEEEEEES---CCTTHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ceEEEEEEeC---CCccHHHHHHHHHHHcCCcHHHhhhhc
Confidence 4567888874 689999999999999999999988764
No 75
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=70.32 E-value=3.3 Score=36.48 Aligned_cols=52 Identities=10% Similarity=0.212 Sum_probs=37.7
Q ss_pred ccCCCCchhhhhhhhcccCccEEEEeccCCc-------ceeeeecchhhHHHHHHHHHH
Q 020132 251 MAGVPGTANAIFGAVKDVGANVIMISQASSE-------HSVCFAVPEKEVKAVAEALES 302 (330)
Q Consensus 251 ~~~~~gv~a~if~~L~~~gI~I~~Isq~~se-------~sIS~vv~~~d~~~av~~Lh~ 302 (330)
..+.||+++++.+.|+++++||..++|.... -.+.+-+++.+.+++++.|.+
T Consensus 11 a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~~Le~LL~kLrk 69 (223)
T 1y7p_A 11 AENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGGDFEKILERVKT 69 (223)
T ss_dssp EECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSSCHHHHHHHHHT
T ss_pred EcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCCCHHHHHHHHhC
Confidence 4578999999999999999999999987653 355566666677777777754
No 76
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=68.60 E-value=4.4 Score=38.38 Aligned_cols=38 Identities=21% Similarity=0.431 Sum_probs=33.3
Q ss_pred ceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCC
Q 020132 240 NLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS 280 (330)
Q Consensus 240 nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~s 280 (330)
...+|+++|. ++||+.+++.+.|+++|.||.-++|...
T Consensus 11 ~~~~lt~~g~---Dr~Giv~~vs~~l~~~~~nI~d~~q~~~ 48 (415)
T 3p96_A 11 VSVLITVTGV---DQPGVTATLFEVLSRHGVELLNVEQVVI 48 (415)
T ss_dssp EEEEEEEEEE---CCTTHHHHHHHHHTTTTCEEEEEEEEEE
T ss_pred CeEEEEEEcC---CCCCHHHHHHHHHHHCCCCEEEeeeEEE
Confidence 4578999985 6899999999999999999999998653
No 77
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=65.28 E-value=4.5 Score=37.33 Aligned_cols=36 Identities=8% Similarity=-0.027 Sum_probs=32.1
Q ss_pred eeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccC
Q 020132 241 LALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQAS 279 (330)
Q Consensus 241 ia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~ 279 (330)
-.+++++|. ++||+.+++.+.|+++|+||.-++|..
T Consensus 22 ~~iLtv~c~---DrpGIVa~VS~~La~~g~NI~d~~q~~ 57 (302)
T 3o1l_A 22 TFRLVIACP---DRVGIVAKVSNFLASHNGWITEASHHS 57 (302)
T ss_dssp EEEEEEEEE---CCTTHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred eEEEEEECC---CCCCHHHHHHHHHHHCCCCEEEeeEEe
Confidence 367899985 789999999999999999999999873
No 78
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=63.44 E-value=5.2 Score=34.07 Aligned_cols=63 Identities=25% Similarity=0.259 Sum_probs=43.8
Q ss_pred ceeEEeeecccccCCCCchhhhhhhhcccCccEEEEeccCC--cceeeeecchhhH--HHHHHHHHHHHH
Q 020132 240 NLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS--EHSVCFAVPEKEV--KAVAEALESKFR 305 (330)
Q Consensus 240 nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~~s--e~sIS~vv~~~d~--~~av~~Lh~~f~ 305 (330)
+...|+|.|. ++||+++++...|+++|.||.-+.|... ...+.+.+..... ......|.+.|.
T Consensus 4 ~~~~ltv~~~---DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~~~~~~~~~~l~~~L~ 70 (195)
T 2nyi_A 4 QSFVVSVAGS---DRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAKDGKLIQSALESALP 70 (195)
T ss_dssp EEEEEEEEEE---CCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSSSSHHHHHHHHHHST
T ss_pred eEEEEEEEeC---CCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecCccchhHHHHHHHHHH
Confidence 4568889875 6899999999999999999999888653 3444555543221 122455666553
No 79
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=58.03 E-value=7.4 Score=35.63 Aligned_cols=36 Identities=11% Similarity=0.149 Sum_probs=32.0
Q ss_pred ceeEEeeecccccCCCCchhhhhhhhcccCccEEEEecc
Q 020132 240 NLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQA 278 (330)
Q Consensus 240 nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~ 278 (330)
+-..++++|. ++||+.+++.+.|+++|+||.-++|.
T Consensus 9 ~~~vLtv~c~---Dr~GIVa~Vs~~La~~g~NI~d~~q~ 44 (292)
T 3lou_A 9 HQFVLTLSCP---SAAGQVAAVVGLLDRHRCYVDELTVF 44 (292)
T ss_dssp CEEEEEEEEE---SCSCHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CcEEEEEEcC---CCCCHHHHHHHHHHHCCCCEEeeEEE
Confidence 3467889985 68999999999999999999999987
No 80
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=57.24 E-value=13 Score=33.94 Aligned_cols=35 Identities=9% Similarity=0.042 Sum_probs=31.6
Q ss_pred eeEEeeecccccCCCCchhhhhhhhcccCccEEEEecc
Q 020132 241 LALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQA 278 (330)
Q Consensus 241 ia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~ 278 (330)
-..++++|. ++||+.+++.+.|+++|+||.-++|.
T Consensus 8 ~~vLtv~c~---DrpGIVa~Vs~~La~~g~NI~d~~q~ 42 (286)
T 3n0v_A 8 TWILTADCP---SMLGTVDVVTRYLFEQRCYVTEHHSF 42 (286)
T ss_dssp CEEEEEEEE---CCTTHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cEEEEEEeC---CCCCHHHHHHHHHHHCCCCeeeeeee
Confidence 467889874 68999999999999999999999987
No 81
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=56.16 E-value=32 Score=28.34 Aligned_cols=79 Identities=18% Similarity=0.204 Sum_probs=49.3
Q ss_pred cceeeeccch------hHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeee
Q 020132 36 TDFVVGHGEL------WSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGF 109 (330)
Q Consensus 36 ~~~v~~~GE~------~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~ 109 (330)
+..|+++|.- -++..+++.|++.|+.... ..++.| |.+.+.+.++++++.....+.|++|-
T Consensus 15 rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~-----~~iv~D--------d~~~i~~~l~~~~~~~~~DlVittGG 81 (169)
T 1y5e_A 15 RCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTS-----YEIVKD--------DKESIQQAVLAGYHKEDVDVVLTNGG 81 (169)
T ss_dssp EEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEE-----EEEECS--------SHHHHHHHHHHHHTCTTCSEEEEECC
T ss_pred EEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeE-----EEEeCC--------CHHHHHHHHHHHHhcCCCCEEEEcCC
Confidence 3446666643 3778899999999987543 233333 34556677777775213467788885
Q ss_pred eecCCCCCcccccccCcchhHHHHHHHHh
Q 020132 110 IASTPDNIPTTLKRDGSDFSAAIMGALLR 138 (330)
Q Consensus 110 i~~~~~g~~~~lgrggsD~~A~~lA~~l~ 138 (330)
.+.+. -|++.-.++.+++
T Consensus 82 ~g~g~-----------~D~t~ea~~~~~~ 99 (169)
T 1y5e_A 82 TGITK-----------RDVTIEAVSALLD 99 (169)
T ss_dssp CSSST-----------TCCHHHHHHTTCS
T ss_pred CCCCC-----------CCCcHHHHHHHcC
Confidence 44332 3888777776654
No 82
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=55.76 E-value=5.8 Score=36.26 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=31.3
Q ss_pred eeEEeeecccccCCCCchhhhhhhhcccCccEEEEecc
Q 020132 241 LALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQA 278 (330)
Q Consensus 241 ia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~ 278 (330)
-..++++|. ++||+.+++.+.|+++|+||.-++|.
T Consensus 6 ~~iLtv~g~---DrpGIVa~Vs~~La~~g~NI~d~~q~ 40 (288)
T 3obi_A 6 QYVLTLSCP---DRAGIVSAVSTFLFENGQNILDAQQY 40 (288)
T ss_dssp EEEEEEEEE---CCTTHHHHHHHHHHHTTEEEEEEEEE
T ss_pred eEEEEEECC---CCCCHHHHHHHHHHHCCCcEEeeeee
Confidence 367889985 68999999999999999999999984
No 83
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=55.60 E-value=10 Score=34.49 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=32.1
Q ss_pred ceeEEeeecccccCCCCchhhhhhhhcccCccEEEEecc
Q 020132 240 NLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQA 278 (330)
Q Consensus 240 nia~IsvvG~~~~~~~gv~a~if~~L~~~gI~I~~Isq~ 278 (330)
+-.+++++|. ++||+.+++.+.|+++|+||.-++|.
T Consensus 6 ~~~vLtv~c~---Dr~GIVa~Vs~~La~~g~NI~d~~q~ 41 (287)
T 3nrb_A 6 NQYVLSLACQ---DAPGIVSEVSTFLFNNGANIVEAEQF 41 (287)
T ss_dssp TEEEEEEEEE---CCTTHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CeEEEEEECC---CCCCHHHHHHHHHHHCCCCEEeeeee
Confidence 4568899985 78999999999999999999999984
No 84
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=46.81 E-value=44 Score=27.51 Aligned_cols=68 Identities=21% Similarity=0.226 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccccC
Q 020132 46 WSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDG 125 (330)
Q Consensus 46 ~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrgg 125 (330)
-|+..+++.|++.|+++.. ..++.| |.+...+.++.+.......+.|++|-.+.+.
T Consensus 40 ~ng~~L~~~L~~~G~~v~~-----~~iV~D--------d~~~i~~al~~~~a~~~~DlVittGG~g~~~----------- 95 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIG-----YSLVPD--------DKIKILKAFTDALSIDEVDVIISTGGTGYSP----------- 95 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEE-----EEEECS--------CHHHHHHHHHHHHTCTTCCEEEEESCCSSST-----------
T ss_pred chHHHHHHHHHHCCCEEEE-----EEEeCC--------CHHHHHHHHHHHHhcCCCCEEEecCCcccCC-----------
Confidence 4678899999999987643 233333 3344556666555422346788888544333
Q ss_pred cchhHHHHHHHH
Q 020132 126 SDFSAAIMGALL 137 (330)
Q Consensus 126 sD~~A~~lA~~l 137 (330)
-|.+.-.++..+
T Consensus 96 ~D~t~ea~~~~~ 107 (178)
T 3iwt_A 96 TDITVETIRKLF 107 (178)
T ss_dssp TCCHHHHHGGGC
T ss_pred CCchHHHHHHhh
Confidence 377766655443
No 85
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=46.32 E-value=41 Score=27.82 Aligned_cols=79 Identities=14% Similarity=0.133 Sum_probs=50.1
Q ss_pred cceeeeccc------hhHHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeee
Q 020132 36 TDFVVGHGE------LWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGF 109 (330)
Q Consensus 36 ~~~v~~~GE------~~sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~ 109 (330)
+..|+++|. --++..+++.|++.|+.... ..++.| |.+.+.+.++++++.....+.|++|-
T Consensus 12 ~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~-----~~iv~D--------d~~~i~~~l~~a~~~~~~DlVittGG 78 (172)
T 1mkz_A 12 RIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVD-----KAIVKE--------NRYAIRAQVSAWIASDDVQVVLITGG 78 (172)
T ss_dssp EEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEE-----EEEECS--------CHHHHHHHHHHHHHSSSCCEEEEESC
T ss_pred EEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeE-----EEEeCC--------CHHHHHHHHHHHHhcCCCCEEEeCCC
Confidence 344566553 34678899999999987543 233333 34556677877776212467788885
Q ss_pred eecCCCCCcccccccCcchhHHHHHHHHh
Q 020132 110 IASTPDNIPTTLKRDGSDFSAAIMGALLR 138 (330)
Q Consensus 110 i~~~~~g~~~~lgrggsD~~A~~lA~~l~ 138 (330)
.+.+. .|++.-.++.+++
T Consensus 79 ~g~~~-----------~D~t~ea~~~~~~ 96 (172)
T 1mkz_A 79 TGLTE-----------GDQAPEALLPLFD 96 (172)
T ss_dssp CSSST-----------TCCHHHHHGGGCS
T ss_pred CCCCC-----------CCCHHHHHHHHhc
Confidence 44332 3888887777664
No 86
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=42.72 E-value=67 Score=27.07 Aligned_cols=79 Identities=15% Similarity=0.149 Sum_probs=50.5
Q ss_pred ccceeeeccchh-------HHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEe
Q 020132 35 FTDFVVGHGELW-------SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIAT 107 (330)
Q Consensus 35 ~~~~v~~~GE~~-------sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~ 107 (330)
.+..|+++|..+ ++..+++.|++.|..... ..++.| |.+.+.+.+++++. ....+.|++
T Consensus 31 ~rvaIistGdEl~~G~~Dsn~~~L~~~L~~~G~~v~~-----~~iv~D--------d~~~I~~al~~a~~-~~~DlVItt 96 (185)
T 3rfq_A 31 GRALVVVVDDRTAHGDEDHSGPLVTELLTEAGFVVDG-----VVAVEA--------DEVDIRNALNTAVI-GGVDLVVSV 96 (185)
T ss_dssp EEEEEEEECHHHHTTCCCSHHHHHHHHHHHTTEEEEE-----EEEECS--------CHHHHHHHHHHHHH-TTCSEEEEE
T ss_pred CEEEEEEECcccCCCCcCcHHHHHHHHHHHCCCEEEE-----EEEeCC--------CHHHHHHHHHHHHh-CCCCEEEEC
Confidence 345677877554 788999999999987543 233333 34556677777763 145778888
Q ss_pred eeeecCCCCCcccccccCcchhHHHHHHHHh
Q 020132 108 GFIASTPDNIPTTLKRDGSDFSAAIMGALLR 138 (330)
Q Consensus 108 G~i~~~~~g~~~~lgrggsD~~A~~lA~~l~ 138 (330)
|-.+.+ --|++.-.++..++
T Consensus 97 GGts~g-----------~~D~t~eal~~l~~ 116 (185)
T 3rfq_A 97 GGTGVT-----------PRDVTPESTREILD 116 (185)
T ss_dssp SCCSSS-----------TTCCHHHHHHTTCS
T ss_pred CCCCCC-----------CcccHHHHHHHHhc
Confidence 754432 23777777766544
No 87
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=40.27 E-value=61 Score=26.99 Aligned_cols=68 Identities=19% Similarity=0.201 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccccCc
Q 020132 47 SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (330)
Q Consensus 47 sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrggs 126 (330)
++..+++.|++.|..... ..++.| |.+.+.+.++++++.....+.|++|-.+.+ .-
T Consensus 41 n~~~L~~~l~~~G~~v~~-----~~iv~D--------d~~~I~~al~~a~~~~~~DlVittGG~s~g-----------~~ 96 (178)
T 2pjk_A 41 SGDIIKQLLIENGHKIIG-----YSLVPD--------DKIKILKAFTDALSIDEVDVIISTGGTGYS-----------PT 96 (178)
T ss_dssp HHHHHHHHHHHTTCEEEE-----EEEECS--------CHHHHHHHHHHHHTCTTCCEEEEESCCSSS-----------TT
T ss_pred HHHHHHHHHHHCCCEEEE-----EEEeCC--------CHHHHHHHHHHHHhcCCCCEEEECCCCCCC-----------CC
Confidence 567889999999987543 333333 345566778777762114778888753322 23
Q ss_pred chhHHHHHHHHh
Q 020132 127 DFSAAIMGALLR 138 (330)
Q Consensus 127 D~~A~~lA~~l~ 138 (330)
|++.-.++..++
T Consensus 97 D~t~eal~~~~~ 108 (178)
T 2pjk_A 97 DITVETIRKLFD 108 (178)
T ss_dssp CCHHHHHGGGCS
T ss_pred cchHHHHHHHhc
Confidence 888777776644
No 88
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=40.21 E-value=84 Score=29.80 Aligned_cols=70 Identities=14% Similarity=0.257 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccccCc
Q 020132 47 SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (330)
Q Consensus 47 sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrggs 126 (330)
++..+++.|++.|..... ..+..| |.+.+.+.+++.++ ...+.|++|-.+. |..
T Consensus 208 N~~~L~~~l~~~G~~v~~-----~~iv~D--------d~~~i~~~l~~a~~--~~DlVittGG~s~-----------g~~ 261 (402)
T 1uz5_A 208 NGRALCDAINELGGEGIF-----MGVARD--------DKESLKALIEKAVN--VGDVVVISGGASG-----------GTK 261 (402)
T ss_dssp HHHHHHHHHHHHTSEEEE-----EEEECS--------SHHHHHHHHHHHHH--HCSEEEEECCC----------------
T ss_pred hHHHHHHHHHhCCCeEEE-----EEEeCC--------CHHHHHHHHHHHhh--CCCEEEEcCCCCC-----------CCc
Confidence 678899999999986543 334443 34556677777776 3567788874332 234
Q ss_pred chhHHHHHHHHhhceeEEE
Q 020132 127 DFSAAIMGALLRAHQVTIW 145 (330)
Q Consensus 127 D~~A~~lA~~l~A~~l~~~ 145 (330)
|++-..++.. | ++.||
T Consensus 262 D~t~~al~~~-G--~~~f~ 277 (402)
T 1uz5_A 262 DLTASVIEEL-G--EVKVH 277 (402)
T ss_dssp CHHHHHHHHH-S--EEEEE
T ss_pred ccHHHHHHhh-C--CEEEe
Confidence 8888877765 5 67776
No 89
>2fts_A Gephyrin; gephyrin, neuroreceptor anchoring, structu protein; 2.41A {Rattus norvegicus} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 2fu3_A 1t3e_A
Probab=40.06 E-value=49 Score=31.64 Aligned_cols=72 Identities=19% Similarity=0.241 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccccCc
Q 020132 47 SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (330)
Q Consensus 47 sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrggs 126 (330)
++..+++.|++.|..+.. ..+..| |.+.+.+.+++.++ ...+.|++|-.+. |..
T Consensus 209 N~~~L~~~l~~~G~~v~~-----~~iv~D--------d~~~i~~~l~~a~~--~~DlVittGG~s~-----------g~~ 262 (419)
T 2fts_A 209 NRSTLLATIQEHGYPTIN-----LGIVGD--------NPDDLLNALNEGIS--RADVIITSGGVSM-----------GEK 262 (419)
T ss_dssp HHHHHHHHHHTTTCCEEE-----EEEECS--------SHHHHHHHHHHHHH--HCSEEEEESCCSS-----------SCC
T ss_pred chHHHHHHHHHCCCEEEE-----EeecCC--------CHHHHHHHHHHHHh--cCCEEEEcCCCcC-----------CCc
Confidence 567899999999987643 334443 34556677777776 3567788874332 234
Q ss_pred chhHHHHHHHHhhceeEEE
Q 020132 127 DFSAAIMGALLRAHQVTIW 145 (330)
Q Consensus 127 D~~A~~lA~~l~A~~l~~~ 145 (330)
|++-..++..++. ++.||
T Consensus 263 D~t~~al~~~lg~-~~~f~ 280 (419)
T 2fts_A 263 DYLKQVLDIDLHA-QIHFG 280 (419)
T ss_dssp HHHHHHHHTTTCC-EEEES
T ss_pred ccHHHHHHHHcCC-ceEEe
Confidence 9988888778876 35554
No 90
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=39.08 E-value=57 Score=26.63 Aligned_cols=68 Identities=16% Similarity=0.191 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccccCc
Q 020132 47 SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (330)
Q Consensus 47 sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrggs 126 (330)
++..+++.|++.|+.... ..++.| |.+.+.+.++++++.....+.|++|-.+.+. .
T Consensus 22 n~~~l~~~l~~~G~~v~~-----~~iv~D--------d~~~i~~~l~~~~~~~~~DlVittGG~g~g~-----------~ 77 (164)
T 2is8_A 22 THLAIREVLAGGPFEVAA-----YELVPD--------EPPMIKKVLRLWADREGLDLILTNGGTGLAP-----------R 77 (164)
T ss_dssp HHHHHHHHHTTSSEEEEE-----EEEECS--------CHHHHHHHHHHHHHTSCCSEEEEESCCSSST-----------T
T ss_pred hHHHHHHHHHHCCCeEeE-----EEEcCC--------CHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC-----------C
Confidence 567889999999976543 233333 3455667777777521246778887544322 3
Q ss_pred chhHHHHHHHHh
Q 020132 127 DFSAAIMGALLR 138 (330)
Q Consensus 127 D~~A~~lA~~l~ 138 (330)
|++.-.++.+++
T Consensus 78 D~t~ea~~~~~~ 89 (164)
T 2is8_A 78 DRTPEATRELLD 89 (164)
T ss_dssp CCHHHHHHTTCS
T ss_pred CChHHHHHHHhC
Confidence 888777776543
No 91
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=34.37 E-value=30 Score=33.45 Aligned_cols=52 Identities=19% Similarity=0.242 Sum_probs=37.8
Q ss_pred ccCCCCchhhhhhhhcccCccEEEEeccCC-----cceeeeec---chhhHHHHHHHHHH
Q 020132 251 MAGVPGTANAIFGAVKDVGANVIMISQASS-----EHSVCFAV---PEKEVKAVAEALES 302 (330)
Q Consensus 251 ~~~~~gv~a~if~~L~~~gI~I~~Isq~~s-----e~sIS~vv---~~~d~~~av~~Lh~ 302 (330)
..+.||+++++-..|.+++|+|..+.|-.. ...+.++. .+.++.++++.|.+
T Consensus 366 ~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th~~~e~~~~~~~~~~~~ 425 (444)
T 3mtj_A 366 AFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTHVTLEKNVNAAIAKIEA 425 (444)
T ss_dssp EC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEECSEEHHHHHHHHHHHTT
T ss_pred ecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEeccCCHHHHHHHHHHHhc
Confidence 457899999999999999999999998532 24555555 45666666666544
No 92
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=32.42 E-value=45 Score=26.63 Aligned_cols=41 Identities=12% Similarity=0.110 Sum_probs=31.8
Q ss_pred cCCCCchhhhhhhhcccCccEEEEeccCCcceeeeecchhhH
Q 020132 252 AGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEV 293 (330)
Q Consensus 252 ~~~~gv~a~if~~L~~~gI~I~~Isq~~se~sIS~vv~~~d~ 293 (330)
.+.+|+++.+.+.|+++++|+..+...... .+.+-++..+.
T Consensus 8 ~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g-~i~~~~~~~~~ 48 (190)
T 2jhe_A 8 EDRLGLTRELLDLLVLRGIDLRGIEIDPIG-RIYLNFAELEF 48 (190)
T ss_dssp CSCTTHHHHHHHHHHHTTCCEEEEEEETTT-EEEEEECCCCH
T ss_pred ecCCcHHHHHHHHHHHcCCCeEEEEEecCC-EEEEEEEeCCH
Confidence 367999999999999999999999865442 36666664443
No 93
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=28.63 E-value=1.6e+02 Score=23.82 Aligned_cols=67 Identities=16% Similarity=0.241 Sum_probs=41.4
Q ss_pred HHHHHHHHHhc-----CCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCccccc
Q 020132 48 AQMLAAVVRKN-----GIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLK 122 (330)
Q Consensus 48 a~~~~~~L~~~-----Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lg 122 (330)
+..+++.|+++ |.... ...++.| |.+.+.+.++++++.....+.|++|-.+.+
T Consensus 27 ~~~l~~~l~~~~~~~~G~~v~-----~~~iv~D--------d~~~i~~~l~~~~~~~~~DlVittGG~g~g--------- 84 (167)
T 1uuy_A 27 GPRAVSVVDSSSEKLGGAKVV-----ATAVVPD--------EVERIKDILQKWSDVDEMDLILTLGGTGFT--------- 84 (167)
T ss_dssp HHHHHHHHHHTTTTTTSEEEE-----EEEEECS--------CHHHHHHHHHHHHHTSCCSEEEEESCCSSS---------
T ss_pred HHHHHHHHHhccccCCCcEEe-----EEEEcCC--------CHHHHHHHHHHHHhcCCCCEEEECCCCCCC---------
Confidence 45677888877 65442 3334433 345566777777642134677888754422
Q ss_pred ccCcchhHHHHHHHHh
Q 020132 123 RDGSDFSAAIMGALLR 138 (330)
Q Consensus 123 rggsD~~A~~lA~~l~ 138 (330)
--|++.-.++.+++
T Consensus 85 --~~D~t~~a~~~~~~ 98 (167)
T 1uuy_A 85 --PRDVTPEATKKVIE 98 (167)
T ss_dssp --TTCCHHHHHHHHCS
T ss_pred --CCCchHHHHHHHhc
Confidence 23888888888775
No 94
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=28.60 E-value=80 Score=25.76 Aligned_cols=67 Identities=9% Similarity=0.158 Sum_probs=39.3
Q ss_pred HHHHHHHH----HHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCccccc
Q 020132 47 SAQMLAAV----VRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLK 122 (330)
Q Consensus 47 sa~~~~~~----L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lg 122 (330)
++..+++. |++.|+.... ..++.| |.+.+.+.++++++. ...+.|++|-.+.+.
T Consensus 26 n~~~l~~~~~~~l~~~G~~v~~-----~~iv~D--------d~~~I~~~l~~a~~~-~~DlVittGG~g~~~-------- 83 (167)
T 2g2c_A 26 ALPLLQRLMSDELQDYSYELIS-----EVVVPE--------GYDTVVEAIATALKQ-GARFIITAGGTGIRA-------- 83 (167)
T ss_dssp HHHHHHHHHCC----CEEEEEE-----EEEECS--------SHHHHHHHHHHHHHT-TCSEEEEESCCSSST--------
T ss_pred HHHHHHHhHHhHHHHCCCEEeE-----EEEeCC--------CHHHHHHHHHHHHhC-CCCEEEECCCCCCCC--------
Confidence 45788888 8888876533 233333 345666777777752 146778888544332
Q ss_pred ccCcchhHHHHHHHHh
Q 020132 123 RDGSDFSAAIMGALLR 138 (330)
Q Consensus 123 rggsD~~A~~lA~~l~ 138 (330)
-|++.-.++..++
T Consensus 84 ---~D~t~ea~~~~~~ 96 (167)
T 2g2c_A 84 ---KNQTPEATASFIH 96 (167)
T ss_dssp ---TCCHHHHHHTTCS
T ss_pred ---CcChHHHHHHHhC
Confidence 3888777776643
No 95
>1g8l_A Molybdopterin biosynthesis MOEA protein; molybdenum cofactor biosynthesis, metal binding protein; 1.95A {Escherichia coli} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1fc5_A 1g8r_A 2nqu_A 2nro_A 2nqq_A 2nqk_A 2nqr_A 2nqm_A 2nqs_A 2nrp_A 2nqv_A 2nrs_A 2nqn_A
Probab=28.35 E-value=1.6e+02 Score=27.87 Aligned_cols=70 Identities=14% Similarity=0.279 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccccCc
Q 020132 47 SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (330)
Q Consensus 47 sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrggs 126 (330)
++..+.+.|++.|..... ..+..| |.+.+.+.+++.++ ...+.|++|-.+. |..
T Consensus 205 n~~~L~~~l~~~G~~v~~-----~~iv~D--------d~~~i~~al~~a~~--~~DlvittGG~s~-----------g~~ 258 (411)
T 1g8l_A 205 NRLAVHLMLEQLGCEVIN-----LGIIRD--------DPHALRAAFIEADS--QADVVISSGGVSV-----------GEA 258 (411)
T ss_dssp HHHHHHHHHHHTTCEEEE-----EEEECS--------CHHHHHHHHHHHHH--HCSEEEECSSSCS-----------SSC
T ss_pred chHHHHHHHHHCCCEEEE-----EEEeCC--------CHHHHHHHHHHHhh--cCCEEEECCCCCC-----------CCc
Confidence 567899999999986543 334443 34556677777775 4567788774332 234
Q ss_pred chhHHHHHHHHhhceeEEE
Q 020132 127 DFSAAIMGALLRAHQVTIW 145 (330)
Q Consensus 127 D~~A~~lA~~l~A~~l~~~ 145 (330)
|++--.++.. | ++.||
T Consensus 259 D~t~~al~~~-G--~i~f~ 274 (411)
T 1g8l_A 259 DYTKTILEEL-G--EIAFW 274 (411)
T ss_dssp SHHHHHHHHH-S--EEEEE
T ss_pred ccHHHHHHhc-C--cEEEE
Confidence 8888877754 6 56666
No 96
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=27.72 E-value=1.7e+02 Score=24.46 Aligned_cols=78 Identities=19% Similarity=0.176 Sum_probs=47.2
Q ss_pred cceeeeccch--------hHHHHHHHHHHh---cCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccE
Q 020132 36 TDFVVGHGEL--------WSAQMLAAVVRK---NGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTI 104 (330)
Q Consensus 36 ~~~v~~~GE~--------~sa~~~~~~L~~---~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~Vp 104 (330)
+..|+++|.- -++..+++.|++ .|..... ..++.| |.+.+.+.++++++.....+.
T Consensus 16 rv~IistGdEl~~g~~~D~n~~~L~~~L~~~~~~G~~v~~-----~~iv~D--------d~~~I~~al~~a~~~~~~DlV 82 (189)
T 1jlj_A 16 RVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISA-----YKIVPD--------EIEEIKETLIDWCDEKELNLI 82 (189)
T ss_dssp EEEEEEECHHHHTTSSCCHHHHHHHHHHHCTTTTCCEEEE-----EEEECS--------CHHHHHHHHHHHHHTSCCSEE
T ss_pred EEEEEEECCccCCCcccchHHHHHHHHHhchhcCCcEEEE-----EEEeCC--------CHHHHHHHHHHHhhcCCCCEE
Confidence 3445565543 356788999988 6775433 233333 345566777777652234677
Q ss_pred EEeeeeecCCCCCcccccccCcchhHHHHHHHH
Q 020132 105 IATGFIASTPDNIPTTLKRDGSDFSAAIMGALL 137 (330)
Q Consensus 105 Vv~G~i~~~~~g~~~~lgrggsD~~A~~lA~~l 137 (330)
|++|-.+.+ --|++.-.++..+
T Consensus 83 IttGGtg~g-----------~~D~t~eal~~~~ 104 (189)
T 1jlj_A 83 LTTGGTGFA-----------PRDVTPEATKEVI 104 (189)
T ss_dssp EEESCCSSS-----------TTCCHHHHHHHHC
T ss_pred EEcCCCCCC-----------CcccHHHHHHHHh
Confidence 888754432 2388888887664
No 97
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=25.82 E-value=1.3e+02 Score=24.43 Aligned_cols=77 Identities=13% Similarity=0.113 Sum_probs=48.7
Q ss_pred cceeeeccchh--------HHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEe
Q 020132 36 TDFVVGHGELW--------SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIAT 107 (330)
Q Consensus 36 ~~~v~~~GE~~--------sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~ 107 (330)
+..|+++|..+ ++..+++.|++.|...... .++.| | +.+.+.++++++ ....+.|++
T Consensus 9 rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~-----~iv~D--------d-~~i~~al~~a~~-~~~DlVitt 73 (164)
T 3pzy_A 9 SARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQP-----EVVAD--------G-SPVGEALRKAID-DDVDVILTS 73 (164)
T ss_dssp EEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCC-----EEECS--------S-HHHHHHHHHHHH-TTCSEEEEE
T ss_pred EEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEE-----EEeCC--------H-HHHHHHHHHHHh-CCCCEEEEC
Confidence 34566666443 5678999999999875442 23333 4 566777887774 134777888
Q ss_pred eeeecCCCCCcccccccCcchhHHHHHHHHh
Q 020132 108 GFIASTPDNIPTTLKRDGSDFSAAIMGALLR 138 (330)
Q Consensus 108 G~i~~~~~g~~~~lgrggsD~~A~~lA~~l~ 138 (330)
|-.+.+ .-|++.-.++..++
T Consensus 74 GG~s~g-----------~~D~t~eal~~~~~ 93 (164)
T 3pzy_A 74 GGTGIA-----------PTDSTPDQTVAVVD 93 (164)
T ss_dssp SCCSSS-----------TTCCHHHHHHTTCS
T ss_pred CCCCCC-----------CCccHHHHHHHHhc
Confidence 753422 23888777776654
No 98
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=23.95 E-value=1.5e+02 Score=24.91 Aligned_cols=70 Identities=11% Similarity=0.036 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccccCc
Q 020132 47 SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (330)
Q Consensus 47 sa~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrggs 126 (330)
++..+++.|++.|..... ....++.| |.+.+.+.++++++.....+.|++|-.+.+. -
T Consensus 24 n~~~L~~~L~~~G~~~~v---~~~~iV~D--------d~~~I~~al~~a~~~~~~DlVitTGGtg~g~-----------~ 81 (195)
T 1di6_A 24 GIPALEEWLTSALTTPFE---LETRLIPD--------EQAIIEQTLCELVDEMSCHLVLTTGGTGPAR-----------R 81 (195)
T ss_dssp HHHHHHHHHHHHBCSCEE---EEEEEEES--------CHHHHHHHHHHHHHTSCCSEEEEESCCSSST-----------T
T ss_pred HHHHHHHHHHHcCCCCce---EEEEEeCC--------CHHHHHHHHHHHHhcCCCCEEEECCCCCCCC-----------C
Confidence 677899999999986311 12223333 3355667777777522346778888544332 3
Q ss_pred chhHHHHHHHHh
Q 020132 127 DFSAAIMGALLR 138 (330)
Q Consensus 127 D~~A~~lA~~l~ 138 (330)
|++--.++..++
T Consensus 82 D~T~ea~~~~~~ 93 (195)
T 1di6_A 82 DVTPDATLAVAD 93 (195)
T ss_dssp CCHHHHHHHTCS
T ss_pred ccHHHHHHHHhc
Confidence 777777776643
No 99
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=23.48 E-value=2.3e+02 Score=23.19 Aligned_cols=78 Identities=15% Similarity=0.117 Sum_probs=47.5
Q ss_pred cceeeeccchh--------HHHHHHHHHH---hcCCccccccceeEEEECCCCCCCCCCCchhhHHHHHHhhccCCCccE
Q 020132 36 TDFVVGHGELW--------SAQMLAAVVR---KNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTI 104 (330)
Q Consensus 36 ~~~v~~~GE~~--------sa~~~~~~L~---~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~Vp 104 (330)
+..|+++|.-+ ++..+++.|+ +.|+.. . ..++.| |.+.+.+.++++++.....+.
T Consensus 7 rv~IistGdE~~~G~i~Dsn~~~l~~~l~~l~~~G~~v-~-----~~iv~D--------d~~~I~~~l~~~~~~~~~DlV 72 (178)
T 2pbq_A 7 VIGVVTISDRASKGIYEDISGKAIIDYLKDVIITPFEV-E-----YRVIPD--------ERDLIEKTLIELADEKGCSLI 72 (178)
T ss_dssp EEEEEEECHHHHHTSSCCHHHHHHHHHHHHHBCSCCEE-E-----EEEECS--------CHHHHHHHHHHHHHTSCCSEE
T ss_pred EEEEEEeCCcCCCCCeecchHHHHHHHHHHHHhCCCEE-E-----EEEcCC--------CHHHHHHHHHHHHhcCCCCEE
Confidence 34566666543 5678888887 888865 2 223333 345566777777752134677
Q ss_pred EEeeeeecCCCCCcccccccCcchhHHHHHHHHh
Q 020132 105 IATGFIASTPDNIPTTLKRDGSDFSAAIMGALLR 138 (330)
Q Consensus 105 Vv~G~i~~~~~g~~~~lgrggsD~~A~~lA~~l~ 138 (330)
|++|-.+.+. -|++.-.++.+++
T Consensus 73 ittGG~g~g~-----------~D~t~ea~~~~~~ 95 (178)
T 2pbq_A 73 LTTGGTGPAP-----------RDVTPEATEAVCE 95 (178)
T ss_dssp EEESCCSSST-----------TCCHHHHHHHHCS
T ss_pred EECCCCCCCC-----------CCchHHHHHHHhC
Confidence 8888544332 3888877777653
No 100
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=21.56 E-value=2.9e+02 Score=26.50 Aligned_cols=51 Identities=8% Similarity=-0.059 Sum_probs=32.5
Q ss_pred HHHHhhhcccccCCCCCccccccceeeeccchhHHHHHHHHHHhcCCcccccc
Q 020132 14 EFIRSTYNFLSNVDSGHATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMD 66 (330)
Q Consensus 14 ~~i~~~~~~l~~~~~~~~~~~~~~~v~~~GE~~sa~~~~~~L~~~Gi~a~~l~ 66 (330)
+....|.+.+.+.++. ..+-...++-++.=-....+...|++.|++.+.++
T Consensus 175 d~~~~Y~~~l~~~~~~--~~~~lkivvD~~nG~~~~~~~~ll~~lG~~v~~l~ 225 (469)
T 3pdk_A 175 EGGQKYLQYIKQTVEE--DFSGLHIALDCAHGATSSLAPYLFADLEADISTMG 225 (469)
T ss_dssp HHHHHHHHHHHTTCSS--CCTTCEEEEECTTSTTTTHHHHHHHHTTCEEEEES
T ss_pred cHHHHHHHHHHHhcCc--ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEC
Confidence 4455566666666542 12234466666666667788888999999876553
No 101
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=20.81 E-value=2.9e+02 Score=24.70 Aligned_cols=79 Identities=15% Similarity=0.114 Sum_probs=45.2
Q ss_pred HHHHHHHHHhcCCccccccceeEEEECCCCCCC-CCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccccCc
Q 020132 48 AQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQ-VDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (330)
Q Consensus 48 a~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~-~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrggs 126 (330)
-+-++.++.+.|++...+.+. -|+ .....++-.+.++...+...+.+||+.|- +. ..+ .
T Consensus 39 l~~lv~~li~~Gv~gl~v~Gt---------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv-g~-----~st-----~ 98 (304)
T 3cpr_A 39 GREVAAYLVDKGLDSLVLAGT---------TGESPTTTAAEKLELLKAVREEVGDRAKLIAGV-GT-----NNT-----R 98 (304)
T ss_dssp HHHHHHHHHHTTCCEEEESST---------TTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC-CC-----SCH-----H
T ss_pred HHHHHHHHHHcCCCEEEECcc---------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC-CC-----CCH-----H
Confidence 345677778889975443322 122 23444444455565555446789999885 31 111 1
Q ss_pred chh-HHHHHHHHhhceeEEEe
Q 020132 127 DFS-AAIMGALLRAHQVTIWT 146 (330)
Q Consensus 127 D~~-A~~lA~~l~A~~l~~~t 146 (330)
|.. .+..|+.+||+.+.+.+
T Consensus 99 ~ai~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 99 TSVELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEECC
Confidence 322 35556778888877764
No 102
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=20.67 E-value=2.8e+02 Score=24.83 Aligned_cols=79 Identities=16% Similarity=0.146 Sum_probs=45.7
Q ss_pred HHHHHHHHHhcCCccccccceeEEEECCCCCCC-CCCCchhhHHHHHHhhccCCCccEEEeeeeecCCCCCcccccccCc
Q 020132 48 AQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQ-VDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (330)
Q Consensus 48 a~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~-~~~~~~~~~~~i~~~l~~~~~~VpVv~G~i~~~~~g~~~~lgrggs 126 (330)
-+-++.+|.+.|++...+.+. -|+ .....++-.+.++...+...+.+||+.|- +.+ .+ .
T Consensus 34 l~~lv~~li~~Gv~Gl~v~Gt---------TGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv-g~~-----~t-----~ 93 (303)
T 2wkj_A 34 LRRLVQFNIQQGIDGLYVGGS---------TGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV-GCV-----ST-----A 93 (303)
T ss_dssp HHHHHHHHHHTTCSEEEESST---------TTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC-CCS-----SH-----H
T ss_pred HHHHHHHHHHcCCCEEEECee---------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec-CCC-----CH-----H
Confidence 345677888889975443322 122 23444444455565555446789999884 311 11 1
Q ss_pred chh-HHHHHHHHhhceeEEEe
Q 020132 127 DFS-AAIMGALLRAHQVTIWT 146 (330)
Q Consensus 127 D~~-A~~lA~~l~A~~l~~~t 146 (330)
|.. .+..|+.+||+.+.+.+
T Consensus 94 ~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 94 ESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHhCCCCEEEecC
Confidence 322 35567778998887764
Done!