Your job contains 1 sequence.
>020135
MRKVNWAIALHLGALRQLESSSSISHRNPLLHQRWFVQRAAATPSLSNFRSYSTEMLSND
LIKIMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEI
DGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAG
TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFE
SGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANT
TNSAVRVTHIPTGMTISIQDERSQHMVKDS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020135
(330 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2041409 - symbol:AT2G47020 species:3702 "Arabi... 1096 5.3e-111 1
TIGR_CMR|NSE_0406 - symbol:NSE_0406 "peptide chain releas... 595 6.6e-58 1
TIGR_CMR|ECH_0597 - symbol:ECH_0597 "peptide chain releas... 586 5.9e-57 1
TIGR_CMR|APH_0420 - symbol:APH_0420 "peptide chain releas... 584 9.6e-57 1
UNIPROTKB|P0A7I0 - symbol:prfA "peptide chain release fac... 567 6.1e-55 1
DICTYBASE|DDB_G0283175 - symbol:prfA "peptide chain relea... 566 7.8e-55 1
UNIPROTKB|Q9KQ25 - symbol:prfA "Peptide chain release fac... 564 1.3e-54 1
TIGR_CMR|VC_2179 - symbol:VC_2179 "peptide chain release ... 564 1.3e-54 1
TIGR_CMR|CBU_1965 - symbol:CBU_1965 "peptide chain releas... 558 5.5e-54 1
TIGR_CMR|CHY_2563 - symbol:CHY_2563 "peptide chain releas... 557 7.0e-54 1
TIGR_CMR|GSU_3104 - symbol:GSU_3104 "peptide chain releas... 552 2.4e-53 1
TIGR_CMR|SPO_2461 - symbol:SPO_2461 "peptide chain releas... 550 3.8e-53 1
TIGR_CMR|BA_5572 - symbol:BA_5572 "peptide chain release ... 548 6.3e-53 1
TIGR_CMR|CPS_3552 - symbol:CPS_3552 "peptide chain releas... 541 3.5e-52 1
TIGR_CMR|SO_3833 - symbol:SO_3833 "peptide chain release ... 527 1.1e-50 1
TIGR_CMR|DET_1210 - symbol:DET_1210 "peptide chain releas... 508 1.1e-48 1
UNIPROTKB|F1NW58 - symbol:MTRF1L "Uncharacterized protein... 506 1.8e-48 1
ZFIN|ZDB-GENE-030131-8198 - symbol:mtrf1l "mitochondrial ... 505 2.3e-48 1
UNIPROTKB|Q9UGC7 - symbol:MTRF1L "Peptide chain release f... 504 2.9e-48 1
TIGR_CMR|CJE_1784 - symbol:CJE_1784 "peptide chain releas... 504 2.9e-48 1
UNIPROTKB|F1S7X5 - symbol:MTRF1L "Uncharacterized protein... 491 6.9e-47 1
RGD|1598312 - symbol:Mtrf1l "mitochondrial translational ... 489 1.1e-46 1
UNIPROTKB|F1MCM1 - symbol:MTRF1L "Peptide chain release f... 487 1.8e-46 1
MGI|MGI:1918830 - symbol:Mtrf1l "mitochondrial translatio... 485 3.0e-46 1
UNIPROTKB|Q2KI15 - symbol:MTRF1L "Peptide chain release f... 484 3.8e-46 1
TAIR|locus:2099137 - symbol:APG3 "AT3G62910" species:3702... 481 7.9e-46 1
UNIPROTKB|E2RAT2 - symbol:MTRF1 "Uncharacterized protein"... 476 2.7e-45 1
UNIPROTKB|F1RJ87 - symbol:MTRF1 "Uncharacterized protein"... 476 2.7e-45 1
UNIPROTKB|B4DG01 - symbol:MTRF1 "Peptide chain release fa... 474 4.4e-45 1
UNIPROTKB|O75570 - symbol:MTRF1 "Peptide chain release fa... 474 4.4e-45 1
UNIPROTKB|P66016 - symbol:prfA "Peptide chain release fac... 468 1.9e-44 1
MGI|MGI:2384815 - symbol:Mtrf1 "mitochondrial translation... 468 1.9e-44 1
UNIPROTKB|E2QTM1 - symbol:MTRF1L "Uncharacterized protein... 462 8.1e-44 1
UNIPROTKB|Q3MHI7 - symbol:MTRF1 "Peptide chain release fa... 461 1.0e-43 1
FB|FBgn0032486 - symbol:CG5705 species:7227 "Drosophila m... 447 3.2e-42 1
UNIPROTKB|E1BXF8 - symbol:MTRF1 "Uncharacterized protein"... 442 1.1e-41 1
POMBASE|SPAC2F7.17 - symbol:SPAC2F7.17 "mitochondrial pep... 424 8.7e-40 1
TIGR_CMR|CHY_0163 - symbol:CHY_0163 "peptide chain releas... 412 1.6e-38 1
TIGR_CMR|GSU_2278 - symbol:GSU_2278 "peptide chain releas... 409 3.4e-38 1
UNIPROTKB|P07012 - symbol:prfB species:83333 "Escherichia... 405 8.9e-38 1
CGD|CAL0003702 - symbol:orf19.1303 species:5476 "Candida ... 397 6.3e-37 1
SGD|S000003111 - symbol:MRF1 "Mitochondrial translation r... 387 7.2e-36 1
UNIPROTKB|F6V8L3 - symbol:MTRF1L "Uncharacterized protein... 384 1.5e-35 1
TIGR_CMR|SPO_2585 - symbol:SPO_2585 "peptide chain releas... 383 1.9e-35 1
TIGR_CMR|APH_0479 - symbol:APH_0479 "peptide chain releas... 366 1.2e-33 1
TIGR_CMR|ECH_0705 - symbol:ECH_0705 "peptide chain releas... 336 1.9e-33 2
TAIR|locus:2010748 - symbol:AT1G56350 species:3702 "Arabi... 362 3.2e-33 1
TIGR_CMR|CJE_1628 - symbol:CJE_1628 "peptide chain releas... 354 2.3e-32 1
ASPGD|ASPL0000035902 - symbol:AN3462 species:162425 "Emer... 353 2.9e-32 1
WB|WBGene00020993 - symbol:W03F8.3 species:6239 "Caenorha... 353 2.9e-32 1
TIGR_CMR|NSE_0604 - symbol:NSE_0604 "peptide chain releas... 351 4.7e-32 1
DICTYBASE|DDB_G0288835 - symbol:prfB "class I peptide cha... 345 2.0e-31 1
ZFIN|ZDB-GENE-050220-8 - symbol:zgc:113104 "zgc:113104" s... 332 4.9e-30 1
UNIPROTKB|Q5TF45 - symbol:MTRF1L "Peptide chain release f... 329 1.0e-29 1
UNIPROTKB|Q3Z8Y6 - symbol:prfB "Peptide chain release fac... 327 1.6e-29 1
TIGR_CMR|DET_0570 - symbol:DET_0570 "peptide chain releas... 327 1.6e-29 1
UNIPROTKB|P66026 - symbol:prfB "Peptide chain release fac... 316 2.4e-28 1
TAIR|locus:2158936 - symbol:HCF109 "high chlorophyll fluo... 300 1.8e-26 1
GENEDB_PFALCIPARUM|PF14_0265 - symbol:PF14_0265 "peptide ... 235 9.2e-20 1
UNIPROTKB|Q8ILH8 - symbol:PF14_0265 "Peptide chain releas... 235 9.2e-20 1
UNIPROTKB|Q74EJ1 - symbol:GSU0971 "Hydrolase, putative" s... 147 7.0e-10 1
TIGR_CMR|GSU_0971 - symbol:GSU_0971 "peptidyl-tRNA hydrol... 147 7.0e-10 1
TAIR|locus:2006897 - symbol:AT1G33330 species:3702 "Arabi... 123 7.5e-06 2
GENEDB_PFALCIPARUM|MAL7P1.20 - symbol:MAL7P1.20 "peptide ... 126 2.7e-05 1
UNIPROTKB|Q8IC21 - symbol:MAL7P1.20 "Peptide chain releas... 126 2.7e-05 1
CGD|CAL0005347 - symbol:orf19.5488 species:5476 "Candida ... 114 4.9e-05 1
UNIPROTKB|Q74FR0 - symbol:GSU0546 "Peptidyl-tRNA hydrolas... 100 0.00010 1
TIGR_CMR|GSU_0546 - symbol:GSU_0546 "peptidyl-tRNA hydrol... 100 0.00010 1
TAIR|locus:2082563 - symbol:PrfB3 "peptide chain release ... 115 0.00059 1
>TAIR|locus:2041409 [details] [associations]
symbol:AT2G47020 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006415
"translational termination" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.30.160.20 GO:GO:0016149
KO:K02835 OMA:EMPEINP TIGRFAMs:TIGR00019 EMBL:BT030058
IPI:IPI00517548 RefSeq:NP_182225.3 UniGene:At.43988
ProteinModelPortal:A2RVR7 SMR:A2RVR7 PRIDE:A2RVR7
EnsemblPlants:AT2G47020.1 GeneID:819316 KEGG:ath:AT2G47020
TAIR:At2g47020 PhylomeDB:A2RVR7 Genevestigator:Q3E6W0
Uniprot:A2RVR7
Length = 413
Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
Identities = 214/284 (75%), Positives = 246/284 (86%)
Query: 47 SNF-RSYSTEM---LSNDLIKIMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRK 102
SN R Y+T M LS DLIKIM+QR+ AIE R+A L+ L+NQPE SP E+S+ANKELRK
Sbjct: 34 SNMIRLYTTGMEPQLSPDLIKIMDQRLSAIEHRNAVLQKLINQPEYSPEEFSRANKELRK 93
Query: 103 LRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXX 162
LRDSM LI++LR KQKEIDGLKSL+ E S+DKDMLD+A EL A++EEKR
Sbjct: 94 LRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSL 153
Query: 163 XPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 222
PKD+ADERDCILEVRAGTGGEEASLFA+D+F+MYERYSQKKGWKF++V +TESD++GYK
Sbjct: 154 LPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYK 213
Query: 223 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 282
EASAAI G VYGKLKFESGIHRVQR+P+TEKSGR+HTSA+SVAILPQADEVDV+LRNED
Sbjct: 214 EASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNED 273
Query: 283 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHM 326
LRIDTYRSGGSGGQHANTTNSAVR+ H+PTGM +SIQDERSQHM
Sbjct: 274 LRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHM 317
>TIGR_CMR|NSE_0406 [details] [associations]
symbol:NSE_0406 "peptide chain release factor 1"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_506293.1 ProteinModelPortal:Q2GE03 SMR:Q2GE03
STRING:Q2GE03 GeneID:3931950 KEGG:nse:NSE_0406 PATRIC:22680869
ProtClustDB:CLSK2527657 BioCyc:NSEN222891:GHFU-429-MONOMER
Uniprot:Q2GE03
Length = 367
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 115/255 (45%), Positives = 174/255 (68%)
Query: 72 IERRSACLENLVNQPEA-SPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYEC 130
I R L + + PEA + E+SK +KE +L+ + LI+ + ++E L+ L+
Sbjct: 11 ILNRHTYLADRLRCPEAIASQEFSKLSKEYAELKPKVELIARYKKLKEEQAYLELLVKNP 70
Query: 131 SEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFA 190
ED+++ ++ +L D + PKD D + +LEVRAGTGG+EA+LFA
Sbjct: 71 LEDQEIREIGKSDLQAIQDVIPKLELEIKRMLLPKDKDDALNVMLEVRAGTGGDEAALFA 130
Query: 191 VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 250
+F MY++Y+++ W+FE++ ++ +++ GYKEA+A+ISG V+ KLKFESG+HRVQRVP
Sbjct: 131 ASLFHMYQKYAERMKWRFEIISISHNEIGGYKEANASISGSDVFAKLKFESGVHRVQRVP 190
Query: 251 LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 310
TE +GR+HTS +VA+LP+ ++VDV++ ++DLRID YRS G GGQ NTT+SAVR+THI
Sbjct: 191 ETESAGRIHTSTATVAVLPEPEDVDVKINDKDLRIDVYRSSGPGGQSVNTTDSAVRITHI 250
Query: 311 PTGMTISIQDERSQH 325
PTG+ + QDE+SQH
Sbjct: 251 PTGIVVIQQDEKSQH 265
>TIGR_CMR|ECH_0597 [details] [associations]
symbol:ECH_0597 "peptide chain release factor 1"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:YP_507408.1
ProteinModelPortal:Q2GGM5 SMR:Q2GGM5 STRING:Q2GGM5 GeneID:3927422
KEGG:ech:ECH_0597 PATRIC:20576648
BioCyc:ECHA205920:GJNR-599-MONOMER Uniprot:Q2GGM5
Length = 359
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 115/251 (45%), Positives = 166/251 (66%)
Query: 79 LENLVNQP-EASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDML 137
L++++ P + S + A+KE +L + +I + QK+I GL+ LI D ++
Sbjct: 17 LKSMLEDPSQLSVDSFVAASKEYSELLPVISVIDQYNILQKDIAGLEELINNPETDHELK 76
Query: 138 DMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMY 197
+A EE + + PKD D R+ ILE+RAGTGGEEA+LF D+++MY
Sbjct: 77 SLAKEEFYERQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGTGGEEAALFVTDLYRMY 136
Query: 198 ERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGR 257
+Y+++K WKFE + + + + G+KE S ISG V+ +LKFESG+HRVQRVP TE SGR
Sbjct: 137 TKYAEQKNWKFEQINSSSTGIGGHKEISLCISGSNVFARLKFESGVHRVQRVPETEASGR 196
Query: 258 VHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTIS 317
+HTSA +VA+LP+ +EVD+++ +DLRID YRS G GGQ NTT+SAVR+THIP+G+ +
Sbjct: 197 LHTSAATVAVLPEIEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVI 256
Query: 318 IQDERSQHMVK 328
QDE+SQH K
Sbjct: 257 QQDEKSQHKNK 267
>TIGR_CMR|APH_0420 [details] [associations]
symbol:APH_0420 "peptide chain release factor 1"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 RefSeq:YP_505023.1
ProteinModelPortal:Q2GKS8 STRING:Q2GKS8 GeneID:3929978
KEGG:aph:APH_0420 PATRIC:20949454 OMA:EMPEINP ProtClustDB:PRK00591
BioCyc:APHA212042:GHPM-447-MONOMER TIGRFAMs:TIGR00019
Uniprot:Q2GKS8
Length = 359
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 115/251 (45%), Positives = 167/251 (66%)
Query: 79 LENLVNQPEASPAE-YSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDML 137
L+ ++ PE + + A++E L M LI + ++ QKEI L+ L+ S D ++
Sbjct: 17 LKQQLSAPETLGTQAFVVASREYSDLLPIMSLIEKYKSTQKEIAELEELVNSASTDPELR 76
Query: 138 DMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMY 197
+A +E + + PKD D R+ ILE+RAGTGGEEA+LF ++++MY
Sbjct: 77 SLAKDESHIKQKLLPKLRHELQLSLLPKDRDDSRNAILEIRAGTGGEEAALFVGNLYRMY 136
Query: 198 ERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGR 257
+Y+++K WK E + ++ + + GYKEAS +I G V+ +LKFESG+HRVQRVP TE SGR
Sbjct: 137 LKYAERKNWKVETINISTTGIGGYKEASFSIGGKDVFARLKFESGVHRVQRVPETESSGR 196
Query: 258 VHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTIS 317
+HTSA +VA+LP+ +EVD+++ +DLRID YRS G GGQ NTT+SAVR+THIPTG+ +
Sbjct: 197 LHTSAATVAVLPEVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVI 256
Query: 318 IQDERSQHMVK 328
QDE+SQH K
Sbjct: 257 QQDEKSQHKNK 267
>UNIPROTKB|P0A7I0 [details] [associations]
symbol:prfA "peptide chain release factor RF1"
species:83333 "Escherichia coli K-12" [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA;IDA] [GO:0006415
"translational termination" evidence=IEA;IMP] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
Gene3D:3.30.160.20 GO:GO:0043022 GO:GO:0016149 EMBL:M25323
EMBL:U18555 EMBL:D28567 PDB:2B3T PDBsum:2B3T eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 EMBL:M11519 PIR:H64867 RefSeq:NP_415729.1
RefSeq:YP_489478.1 ProteinModelPortal:P0A7I0 SMR:P0A7I0
DIP:DIP-35936N IntAct:P0A7I0 MINT:MINT-1219241 PaxDb:P0A7I0
PRIDE:P0A7I0 EnsemblBacteria:EBESCT00000004821
EnsemblBacteria:EBESCT00000015260 GeneID:12931113 GeneID:949002
KEGG:ecj:Y75_p1183 KEGG:eco:b1211 PATRIC:32117674 EchoBASE:EB0754
EcoGene:EG10761 BioCyc:EcoCyc:EG10761-MONOMER
BioCyc:ECOL316407:JW1202-MONOMER EvolutionaryTrace:P0A7I0
Genevestigator:P0A7I0 Uniprot:P0A7I0
Length = 360
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 111/245 (45%), Positives = 163/245 (66%)
Query: 85 QPEASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEEL 144
Q A + ++E +L D ++ + Q++I+ + ++ +D +M +MA +EL
Sbjct: 27 QTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMML----DDPEMREMAQDEL 82
Query: 145 CLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKK 204
A ++ ++ PKD DER+ LEVRAGTGG+EA+LFA D+F+MY RY++ +
Sbjct: 83 REAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEAR 142
Query: 205 GWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVS 264
W+ E++ +E + GYKE A ISG GVYG+LKFESG HRVQRVP TE GR+HTSA +
Sbjct: 143 RWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACT 202
Query: 265 VAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERS 323
VA++P+ + ++ + DLRIDT+RS G+GGQH NTT+SA+R+TH+PTG+ + QDERS
Sbjct: 203 VAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERS 262
Query: 324 QHMVK 328
QH K
Sbjct: 263 QHKNK 267
>DICTYBASE|DDB_G0283175 [details] [associations]
symbol:prfA "peptide chain release factor 1"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
dictyBase:DDB_G0283175 GO:GO:0005737 GenomeReviews:CM000153_GR
Gene3D:3.30.160.20 EMBL:AAFI02000051 GO:GO:0016149 eggNOG:COG0216
KO:K02835 RefSeq:XP_639198.1 ProteinModelPortal:Q54RE7
STRING:Q54RE7 EnsemblProtists:DDB0237484 GeneID:8623973
KEGG:ddi:DDB_G0283175 InParanoid:Q54RE7 OMA:HAAICIN
ProtClustDB:CLSZ2430394 Uniprot:Q54RE7
Length = 430
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 114/261 (43%), Positives = 171/261 (65%)
Query: 68 RVLAIERRSACLENLVNQPEA-SPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKS- 125
R+ + ++S L N+++ +E K +KEL++ + + +L K KE+ L++
Sbjct: 78 RLNLMGKKSKELRNMIDSNMGLGQSEIKKISKELQETAEPLGYFGDLIEKLKELKELQTM 137
Query: 126 LIYECSED-KDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGE 184
L+ E ED K M+ +L E KDDA D ILE+RAGTGG
Sbjct: 138 LVEETDEDGKQMIKSDINKLKQEEIEPLEKQLLFSLLPGSKDDAG--DAILEIRAGTGGS 195
Query: 185 EASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIH 244
EA LF DV++MY Y +KGW FE + ++ +++ GY++ + ++SG GV+G LK+ESG+H
Sbjct: 196 EAQLFTQDVYEMYRSYCLQKGWTFEPLELSVTEVGGYRDVTVSVSGKGVFGFLKYESGVH 255
Query: 245 RVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSA 304
RVQRVPLTE GR+HTS ++VAILP+ +VD+++ + DL++D YRS G+GGQ NTT+SA
Sbjct: 256 RVQRVPLTETQGRIHTSTITVAILPEPKDVDIQIHDRDLKVDIYRSSGNGGQSVNTTDSA 315
Query: 305 VRVTHIPTGMTISIQDERSQH 325
VR+TH+PTG+T+++QDERSQH
Sbjct: 316 VRITHLPTGITVAMQDERSQH 336
>UNIPROTKB|Q9KQ25 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 109/260 (41%), Positives = 167/260 (64%)
Query: 72 IERRSACLENLVNQPEA--SPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYE 129
+ER +++L+ P ++ +KE +L + + ++++ + + E
Sbjct: 13 VERYEE-VQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEMAQE 71
Query: 130 CSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLF 189
+D +M +MA +E+ A +R PKD D+R+C LE+RAG GG+EA +F
Sbjct: 72 --DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIF 129
Query: 190 AVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRV 249
A D+F+MY R+++KKGW+ EV+ +E++ GYKE A ++G G YG LKFESG HRVQRV
Sbjct: 130 AGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRV 189
Query: 250 PLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 308
P TE GR+HTSA +VA++P+ E ++ ++ DL+IDT+RS G+GGQH NTT+SA+R+T
Sbjct: 190 PATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRIT 249
Query: 309 HIPTGMTISIQDERSQHMVK 328
H+PTG+ + QDERSQH K
Sbjct: 250 HLPTGIVVECQDERSQHKNK 269
>TIGR_CMR|VC_2179 [details] [associations]
symbol:VC_2179 "peptide chain release factor 1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 109/260 (41%), Positives = 167/260 (64%)
Query: 72 IERRSACLENLVNQPEA--SPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYE 129
+ER +++L+ P ++ +KE +L + + ++++ + + E
Sbjct: 13 VERYEE-VQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEMAQE 71
Query: 130 CSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLF 189
+D +M +MA +E+ A +R PKD D+R+C LE+RAG GG+EA +F
Sbjct: 72 --DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIF 129
Query: 190 AVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRV 249
A D+F+MY R+++KKGW+ EV+ +E++ GYKE A ++G G YG LKFESG HRVQRV
Sbjct: 130 AGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRV 189
Query: 250 PLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 308
P TE GR+HTSA +VA++P+ E ++ ++ DL+IDT+RS G+GGQH NTT+SA+R+T
Sbjct: 190 PATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRIT 249
Query: 309 HIPTGMTISIQDERSQHMVK 328
H+PTG+ + QDERSQH K
Sbjct: 250 HLPTGIVVECQDERSQHKNK 269
>TIGR_CMR|CBU_1965 [details] [associations]
symbol:CBU_1965 "peptide chain release factor 1"
species:227377 "Coxiella burnetii RSA 493" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0016149 EMBL:X78969 eggNOG:COG0216 HOGENOM:HOG000074815
KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
PIR:A61648 RefSeq:NP_820940.1 ProteinModelPortal:P47849 SMR:P47849
PRIDE:P47849 GeneID:1209878 KEGG:cbu:CBU_1965 PATRIC:17932673
BioCyc:CBUR227377:GJ7S-1939-MONOMER Uniprot:P47849
Length = 361
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 106/237 (44%), Positives = 155/237 (65%)
Query: 93 YSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEK 152
Y + KE +L + + + +K I+ + + E +D ++ +A EEL +++
Sbjct: 35 YRELGKEYAQLEPIVKCFQQFQQNEKAIESAEEMQQE--KDPELRKLAEEELEQLTLKKE 92
Query: 153 RXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVG 212
PKD DER+ LE+RAGTGG EA++FA D+F+MY RY++ KGW+ +V
Sbjct: 93 ELEDQLKLLLVPKDPNDERNVFLEIRAGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVS 152
Query: 213 VTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQAD 272
E + G+KE A + G GVY +LKFESG HRVQRVP+TE GR+HTSA +VAI+P+ D
Sbjct: 153 AHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQRVPVTESQGRIHTSACTVAIMPEVD 212
Query: 273 EVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
E+D +++ +LRIDT+R+ G+GGQH N T+SA+R+TH+PTG+ + QDERSQH K
Sbjct: 213 EIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIRITHLPTGVVVECQDERSQHKNK 269
>TIGR_CMR|CHY_2563 [details] [associations]
symbol:CHY_2563 "peptide chain release factor 1"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0
OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
RefSeq:YP_361356.1 ProteinModelPortal:Q3A928 SMR:Q3A928
STRING:Q3A928 GeneID:3727190 KEGG:chy:CHY_2563 PATRIC:21278175
BioCyc:CHYD246194:GJCN-2562-MONOMER Uniprot:Q3A928
Length = 358
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 111/263 (42%), Positives = 165/263 (62%)
Query: 72 IERRSACLENLVNQPEA-SPAE----YSKANKELRKLRDSMHLISELRTKQKEIDGLKSL 126
+E + L L++ PE + + Y KA+ E+ ++ + + E + KEI+ + +
Sbjct: 8 LEEKYEELSRLISDPEVIADTQRWQGYVKAHAEIEEI---VQVYREYKKTVKEIEDAERM 64
Query: 127 IYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEA 186
+ E D D ++ EL + + PKD DE++ I+E+RAG GGEEA
Sbjct: 65 LDE-KLDPDFRELVQSELHDLKERREELEAKLKILLLPKDPNDEKNVIMEIRAGAGGEEA 123
Query: 187 SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 246
+LFA D+F+MY +Y+ + GWK E++ +DL G+KE I G GVY ++KFESG+HRV
Sbjct: 124 ALFAGDLFRMYSKYADRMGWKVEIMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESGVHRV 183
Query: 247 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 306
QRVP TE GR+HTS +VA+LP+A+EV+V + DLRID + + G+GGQH N T SAVR
Sbjct: 184 QRVPTTESGGRIHTSTATVAVLPEAEEVEVEINPNDLRIDVFCASGAGGQHVNKTESAVR 243
Query: 307 VTHIPTGMTISIQDERSQHMVKD 329
+THIPTG+ ++ QDE+SQH K+
Sbjct: 244 ITHIPTGIVVTCQDEKSQHKNKE 266
>TIGR_CMR|GSU_3104 [details] [associations]
symbol:GSU_3104 "peptide chain release factor 1"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 OMA:SVMLEIR RefSeq:NP_954145.1
ProteinModelPortal:Q748B1 SMR:Q748B1 GeneID:2688463
KEGG:gsu:GSU3104 PATRIC:22029063
BioCyc:GSUL243231:GH27-3086-MONOMER Uniprot:Q748B1
Length = 355
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 114/262 (43%), Positives = 168/262 (64%)
Query: 65 MEQRVLAIERRSACLENLVNQPEA--SPAEYSKANKELRKLRDSMHLISELRTKQKEIDG 122
M +++ +E R LE+L+ P + E+ + ++E L LI RT +K ++
Sbjct: 1 MFEKIEELEVRYHELESLLADPAVLGNQPEFRRLSREHNDLTP---LIESYRTYKKVLEE 57
Query: 123 LKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTG 182
++ E D +M +MA EL ++ P+D D+R+ ILE+RAGTG
Sbjct: 58 MEGN-RELLADPEMKEMAQAELEELEQRQEELEGEIKLLLLPRDPNDDRNVILEIRAGTG 116
Query: 183 GEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESG 242
G+E++LFA D+F+MY R++++ WK EV+ +ES+ G+KE A I G GV+ KLK+ESG
Sbjct: 117 GDESALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALIEGQGVFAKLKYESG 176
Query: 243 IHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTN 302
HRVQRVP TE GR+HTSA +VA+LP+A++++V + DL+ID YR+ G+GGQH N T
Sbjct: 177 THRVQRVPETEAQGRIHTSACTVAVLPEAEDIEVDINPADLKIDVYRASGAGGQHVNKTE 236
Query: 303 SAVRVTHIPTGMTISIQDERSQ 324
SAVR+THIPTG+ + QDERSQ
Sbjct: 237 SAVRITHIPTGIVVECQDERSQ 258
>TIGR_CMR|SPO_2461 [details] [associations]
symbol:SPO_2461 "peptide chain release factor 1"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
HSSP:P0A7I0 ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_167678.1 ProteinModelPortal:Q5LQM7 GeneID:3194030
KEGG:sil:SPO2461 PATRIC:23378321 Uniprot:Q5LQM7
Length = 351
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 115/262 (43%), Positives = 168/262 (64%)
Query: 64 IMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGL 123
I E+R+ I +R LE + AS ++ + KE LR + I+ R ++D
Sbjct: 2 IPEERLDQITQRFQYLEAAMADG-ASGSDIAALAKEYSDLRPVVEQIAAWRQLCADMDEA 60
Query: 124 KSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGG 183
++++ D DM +A EEL L PKD AD R +LE+R GTGG
Sbjct: 61 RAML----SDPDMKALAEEELPLLKARLPEAEQALQLALLPKDAADARPAMLEIRPGTGG 116
Query: 184 EEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGI 243
+EA+LFA D+ +MY+RY++ +GWK E++ + E++L G KE A ISG V+ +LK+ESG+
Sbjct: 117 DEAALFAGDLLRMYQRYAEARGWKLELIELQETELGGIKEVVARISGENVFARLKYESGV 176
Query: 244 HRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNS 303
HRVQRVP TE GR+HTSA +VA+LP+A +VD+++ D+RIDT RS G+GGQH NTT+S
Sbjct: 177 HRVQRVPETESGGRIHTSAATVAVLPEAQDVDIQIDPGDIRIDTMRSSGAGGQHVNTTDS 236
Query: 304 AVRVTHIPTGMTISIQDERSQH 325
AVR+TH+P+G+ ++ E+SQH
Sbjct: 237 AVRITHLPSGIVVT-SSEKSQH 257
>TIGR_CMR|BA_5572 [details] [associations]
symbol:BA_5572 "peptide chain release factor 1"
species:198094 "Bacillus anthracis str. Ames" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:NP_847729.1
RefSeq:YP_022240.1 RefSeq:YP_031417.1 ProteinModelPortal:Q81JX1
SMR:Q81JX1 DNASU:1085262 EnsemblBacteria:EBBACT00000012375
EnsemblBacteria:EBBACT00000014683 EnsemblBacteria:EBBACT00000022198
GeneID:1085262 GeneID:2819896 GeneID:2852042 KEGG:ban:BA_5572
KEGG:bar:GBAA_5572 KEGG:bat:BAS5178
BioCyc:BANT260799:GJAJ-5253-MONOMER
BioCyc:BANT261594:GJ7F-5432-MONOMER Uniprot:Q81JX1
Length = 355
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 106/262 (40%), Positives = 169/262 (64%)
Query: 65 MEQRVLAIERRSACLENLVNQPE--ASPAEYSKANKELRKLRDSMHLISELRTKQKEIDG 122
M R+ A+E R L L++ P + + + +KE +++++ + E + ++++
Sbjct: 1 MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60
Query: 123 LKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTG 182
K+++ E D +M +M EE+ +EK PKD D+++ I+EVR G
Sbjct: 61 AKAML-EDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 119
Query: 183 GEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESG 242
G+EA+LFA D+++MY RY++ +GWK E++ + ++L GYKE I+G G + KLKFE+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179
Query: 243 IHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTN 302
HRVQRVP TE GR+HTS +VA+LP+A+EV++ + +D+R+DT+ S G GGQ NTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239
Query: 303 SAVRVTHIPTGMTISIQDERSQ 324
SAVR+TH+PTG+ +S QDE+SQ
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQ 261
>TIGR_CMR|CPS_3552 [details] [associations]
symbol:CPS_3552 "peptide chain release factor 1"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 OMA:EMPEINP
TIGRFAMs:TIGR00019 RefSeq:YP_270226.1 ProteinModelPortal:Q47Y94
SMR:Q47Y94 STRING:Q47Y94 GeneID:3522324 KEGG:cps:CPS_3552
PATRIC:21470035 BioCyc:CPSY167879:GI48-3580-MONOMER Uniprot:Q47Y94
Length = 362
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 106/262 (40%), Positives = 165/262 (62%)
Query: 67 QRVLAIERRSACLENLVNQPEA-SPAEYSKA-NKELRKLRDSMHLISELRTKQKEIDGLK 124
Q++ + R ++ L++ P S E +A +KE ++L + + ++ + + +
Sbjct: 7 QKLEVLVERFEEVQALLSDPATISDQEKFRALSKEFKQLDAVTSVFNNYKSAEDDFSTAE 66
Query: 125 SLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGE 184
++ + +D DM +MA EE A P+D D+ +C +E+RAG GG+
Sbjct: 67 LMLKD--DDPDMREMAQEEFKDAKKAVADIADELQILLLPRDPNDDNNCFVEIRAGAGGD 124
Query: 185 EASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIH 244
EA++FA D+F+MY RY++KKGWK EV+ ES+ GYKE ++G GV+G +KFESG H
Sbjct: 125 EAAIFAGDLFRMYSRYAEKKGWKIEVMNSNESEQGGYKELIMKVNGEGVFGHMKFESGGH 184
Query: 245 RVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNS 303
RVQRVP TE GRVHTSA +V ++P+ E D + + DL++DT+R+ G+GGQH N T+S
Sbjct: 185 RVQRVPATESQGRVHTSACTVVVMPEIPEADAIEINKADLKVDTFRASGAGGQHVNKTDS 244
Query: 304 AVRVTHIPTGMTISIQDERSQH 325
A+R+THIPTG+ + Q++RSQH
Sbjct: 245 AIRITHIPTGVVVECQEQRSQH 266
>TIGR_CMR|SO_3833 [details] [associations]
symbol:SO_3833 "peptide chain release factor 1"
species:211586 "Shewanella oneidensis MR-1" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:GEAGGYK ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:NP_719366.1 ProteinModelPortal:Q8EAR3
SMR:Q8EAR3 GeneID:1171478 KEGG:son:SO_3833 PATRIC:23527352
Uniprot:Q8EAR3
Length = 363
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 101/239 (42%), Positives = 151/239 (63%)
Query: 88 ASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLA 147
A + +KE +L + + + Q +++ K ++ E +D +M +MA EE+ A
Sbjct: 30 ADQDRFRALSKEYSQLEEVVAGFKAYQQAQADLESAKEMLEE--DDAEMREMAQEEIKAA 87
Query: 148 IDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWK 207
E +R PKD D+ + +E+RAG GG+EA++FA D+F+MY RY++ W+
Sbjct: 88 KVELERLEAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQ 147
Query: 208 FEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAI 267
E++ E + G+KE +SG G YGKLKFESG HRVQRVP TE GRVHTSAV+V +
Sbjct: 148 LEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVV 207
Query: 268 LPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQH 325
+ + E + + + DL++DT+RS G+GGQH N T+SA+R+THIPTG+ + QD+RSQH
Sbjct: 208 MHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQH 266
>TIGR_CMR|DET_1210 [details] [associations]
symbol:DET_1210 "peptide chain release factor 1"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_181923.1 ProteinModelPortal:Q3Z776
STRING:Q3Z776 GeneID:3229489 KEGG:det:DET1210 PATRIC:21609455
OMA:SVMLEIR BioCyc:DETH243164:GJNF-1211-MONOMER Uniprot:Q3Z776
Length = 355
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 102/262 (38%), Positives = 157/262 (59%)
Query: 65 MEQRVLAIERRSACLENLVNQPEA-SPAEYSKA-NKELRKLRDSMHLISELRTKQKEIDG 122
M +R+ E+R +E +++PE + A + +E L+ + + + KE++
Sbjct: 1 MLERLENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAISKELED 60
Query: 123 LKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTG 182
K+L+ E +D+DM DM E+ PKD D++ I+E+RAGTG
Sbjct: 61 TKNLL-EIEKDEDMKDMVRGEIASLEKSMADLYTQMTLELLPKDPNDDKSIIMEIRAGTG 119
Query: 183 GEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESG 242
G+EA LFA D++KMY RY+ K WK EV+ + + KE ++G G + +LK+E G
Sbjct: 120 GDEAGLFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERG 179
Query: 243 IHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTN 302
+HRVQRVP TE SGR+HTS +VA+LPQ +EVD+ + +D+R+D + S G+GGQ+
Sbjct: 180 VHRVQRVPQTEASGRIHTSTATVAVLPQVEEVDIDINMDDVRVDIFHSSGAGGQNVQKVA 239
Query: 303 SAVRVTHIPTGMTISIQDERSQ 324
+A+R+THIPTG+ + QDERSQ
Sbjct: 240 TAIRLTHIPTGLVVCCQDERSQ 261
>UNIPROTKB|F1NW58 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 OMA:YSMKLEE
GeneTree:ENSGT00390000011879 EMBL:AADN02025387 EMBL:AADN02025388
IPI:IPI00593690 Ensembl:ENSGALT00000022140 Uniprot:F1NW58
Length = 367
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 96/215 (44%), Positives = 139/215 (64%)
Query: 110 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDAD 169
I LR K++E+ + L + E +D+ +A E+ +E P ++ D
Sbjct: 53 IQRLRDKERELQDTRELALQ-DESEDLRKLAEREIVSCEEEIAELKHQIVLLLIPSEETD 111
Query: 170 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 229
D ++EV AG GG+EA LF ++F MY RY+ K WKFE++ S++ G + A A+I+
Sbjct: 112 NSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRHAVASIA 171
Query: 230 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 289
G+ Y +KFE G+HRVQRVP TEK GR+HTS ++VAILPQ E+++++ +DLRI+T R
Sbjct: 172 GLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEMELKINPKDLRIETKR 231
Query: 290 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
+ G+GGQH NTT+SAVR+ HIPTG+T Q ERSQ
Sbjct: 232 ASGAGGQHVNTTDSAVRIVHIPTGVTSECQQERSQ 266
>ZFIN|ZDB-GENE-030131-8198 [details] [associations]
symbol:mtrf1l "mitochondrial translational release
factor 1-like" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA] [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 ZFIN:ZDB-GENE-030131-8198 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
EMBL:CU651596 IPI:IPI00802409 Ensembl:ENSDART00000084094
Uniprot:F1QA94
Length = 339
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 106/237 (44%), Positives = 153/237 (64%)
Query: 97 NKELRKLRDSMHL-ISELRTKQKEIDGLKSLIYECSEDKDMLDMA-TE-ELCLAIDEEKR 153
N L S+ L I +L KQKE++ ++ L+ + D ++L++A TE E LA ++ R
Sbjct: 13 NSVLESRWPSLALNIKKLEVKQKEMEDMQDLLKD--NDPELLELAETEKEAVLADIQDLR 70
Query: 154 XXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGV 213
P++++D + +LEV AG GG+EA LF ++F+MY+ Y+ GW F+V+
Sbjct: 71 QKILSLLI--PEEESDMSELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEA 128
Query: 214 TESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE 273
S+L G + ASA++SG Y KLKFE+G+HRVQRVP TE GR HTS ++VAILPQ E
Sbjct: 129 NASELGGVRHASASVSGPLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTE 188
Query: 274 VDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVKDS 330
+ + +DL+I+T R+ G+GGQH NTT+SAVR+TH+PTG Q ERSQ KD+
Sbjct: 189 ISFTINPKDLKIETKRASGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDT 245
>UNIPROTKB|Q9UGC7 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005739 EMBL:CH471051 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:AL080276 CTD:54516 eggNOG:COG0216
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 EMBL:AK027684
EMBL:AK095240 EMBL:AK290662 EMBL:BC011873 EMBL:BC014428
EMBL:BC105973 IPI:IPI00295737 IPI:IPI00477207 IPI:IPI00513970
IPI:IPI00890825 RefSeq:NP_001107656.1 RefSeq:NP_061914.3
UniGene:Hs.225836 HSSP:Q9X183 ProteinModelPortal:Q9UGC7 SMR:Q9UGC7
STRING:Q9UGC7 PhosphoSite:Q9UGC7 DMDM:74753314 PRIDE:Q9UGC7
DNASU:54516 Ensembl:ENST00000367230 Ensembl:ENST00000367231
Ensembl:ENST00000367233 Ensembl:ENST00000414771 GeneID:54516
KEGG:hsa:54516 UCSC:uc003qpi.4 UCSC:uc003qpk.4 UCSC:uc003qpl.4
GeneCards:GC06M153308 H-InvDB:HIX0006308 HGNC:HGNC:21051
HPA:HPA036367 MIM:613542 neXtProt:NX_Q9UGC7 PharmGKB:PA134870441
InParanoid:Q9UGC7 OMA:YSMKLEE PhylomeDB:Q9UGC7 GenomeRNAi:54516
NextBio:56904 ArrayExpress:Q9UGC7 Bgee:Q9UGC7 CleanEx:HS_MTRF1L
Genevestigator:Q9UGC7 Uniprot:Q9UGC7
Length = 380
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 102/231 (44%), Positives = 150/231 (64%)
Query: 94 SKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKR 153
S+A+ ++R+ + + +I L K++E+ + L+++ E++D+ +A E+ L E +
Sbjct: 53 SEAHLKVRR-PELLAVIKLLNEKERELRETEHLLHD--ENEDLRKLAENEITLCQKEITQ 109
Query: 154 XXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGV 213
P ++ DE D ILEV AG GG+EA LF ++F MY++Y+ K W FE +
Sbjct: 110 LKHQIILLLVPSEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEY 169
Query: 214 TESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE 273
S+L G + ASA+I G Y +KFE G+HRVQRVP TEK GRVHTS ++VAILPQ E
Sbjct: 170 FPSELGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE 229
Query: 274 VDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
+++ + +DLRIDT R+ G+GGQH NTT+SAVR+ H+PTG+ Q ERSQ
Sbjct: 230 INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQ 280
>TIGR_CMR|CJE_1784 [details] [associations]
symbol:CJE_1784 "peptide chain release factor 1"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_179756.1 ProteinModelPortal:Q5HSH9
SMR:Q5HSH9 STRING:Q5HSH9 GeneID:3232411 KEGG:cjr:CJE1784
PATRIC:20045378 BioCyc:CJEJ195099:GJC0-1814-MONOMER Uniprot:Q5HSH9
Length = 355
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 99/234 (42%), Positives = 145/234 (61%)
Query: 97 NKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXX 156
+KE + L + E I+ K+L+ D ++ ++A EEL + + +
Sbjct: 36 SKEQKNLEPIVLKAKEYLKTLDNIEENKALL----NDPELGELAKEELKTLEELKPKLEE 91
Query: 157 XXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTES 216
PKD DER+ LE+RAG GG+EASLF D+ K Y RY++ +G+K E+V +E
Sbjct: 92 EIKILLLPKDPNDERNIFLEIRAGAGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEG 151
Query: 217 DLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDV 276
+ G+KE + G G Y +LK+E G HRVQRVP TE GRVHTSA++VA++P+ D++++
Sbjct: 152 SVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDDIEI 211
Query: 277 RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVKDS 330
+ DL++D RS G GGQ NTT+SAVR+THIPTG+ + QD +SQH K+S
Sbjct: 212 EINPNDLKVDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKES 265
>UNIPROTKB|F1S7X5 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:GEAGGYK EMBL:CU633523 Ensembl:ENSSSCT00000004505 Uniprot:F1S7X5
Length = 380
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 97/216 (44%), Positives = 142/216 (65%)
Query: 110 ISELRT-KQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDA 168
+++L T K++E+ + L+++ E +D+ +A E+ E + P ++A
Sbjct: 67 VAKLLTEKERELLETEHLLHD--ESEDLRKLAENEIISCQKEIAQLKHQIVLLLVPSEEA 124
Query: 169 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 228
DE D ILEV AG GG+EA LF ++F MY++Y+ K W FE++ S++ G + ASA+I
Sbjct: 125 DENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHASASI 184
Query: 229 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 288
G Y +KFE G+HRVQRVP TEK GR+HTS ++VAILPQ E+++ + +DLRIDT
Sbjct: 185 GGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLRIDTK 244
Query: 289 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
R+ G+GGQH NTT+SAVR+ H+PTG+ Q ERSQ
Sbjct: 245 RASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQ 280
>RGD|1598312 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 RGD:1598312 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0
HSSP:Q9X183 GeneTree:ENSGT00390000011879 OMA:GEAGGYK EMBL:BC097970
IPI:IPI00365406 RefSeq:NP_001020894.1 UniGene:Rn.205194
ProteinModelPortal:Q4V7E5 STRING:Q4V7E5 PRIDE:Q4V7E5
Ensembl:ENSRNOT00000025398 GeneID:361473 KEGG:rno:361473
UCSC:RGD:1598312 InParanoid:Q4V7E5 NextBio:676427
Genevestigator:Q4V7E5 Uniprot:Q4V7E5
Length = 373
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 97/212 (45%), Positives = 136/212 (64%)
Query: 113 LRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERD 172
L K++E+ +SL+++ E++D+ +A E+ L E P +D D D
Sbjct: 64 LNEKERELRDTESLLHD--ENEDLKKLAESEIALCQKEIAELKHRIISLLVPSEDMDGSD 121
Query: 173 CILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVG 232
ILEV AG GG+EA LF ++F MY++Y+ K W FE + S+L G + ASA+I G
Sbjct: 122 LILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGPE 181
Query: 233 VYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGG 292
Y +KFE G+HRVQRVP TE+ GR+HTS ++VAILPQ E+ + + +DLRIDT R+ G
Sbjct: 182 AYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTEIKLVINPKDLRIDTKRASG 241
Query: 293 SGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
+GGQH NTT+SAVR+ H+PTG+ Q ERSQ
Sbjct: 242 AGGQHVNTTDSAVRIVHLPTGIISECQQERSQ 273
>UNIPROTKB|F1MCM1 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 IPI:IPI00714066 UniGene:Bt.20306
GeneTree:ENSGT00390000011879 OMA:VEIHAND EMBL:DAAA02027199
Ensembl:ENSBTAT00000012219 Uniprot:F1MCM1
Length = 380
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 101/250 (40%), Positives = 151/250 (60%)
Query: 75 RSACLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDK 134
R L + + S A++ EL + L+S+ K++E+ + L+++ E++
Sbjct: 39 RGGALRTFLERQVGSEAQFQVRRPELVAVAK---LLSD---KEQELQETQHLLHD--ENE 90
Query: 135 DMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVF 194
D+ +A E+ E + P ++ D+ D ILEV AG GG+EA LF ++F
Sbjct: 91 DLRKLAENEITSCEKEIAQLKHQIILLLVPSEETDKNDLILEVTAGVGGQEAMLFTSEIF 150
Query: 195 KMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEK 254
MY++Y+ K W FE + S++ G + ASA+I G Y +KFE G+HRVQRVP TEK
Sbjct: 151 DMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGSEAYKHMKFEGGVHRVQRVPKTEK 210
Query: 255 SGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGM 314
GR+HTS ++VAILPQ E+++ + +DLRIDT R+ G+GGQH NTT+SAVR+ H+PTG+
Sbjct: 211 QGRIHTSTMTVAILPQPTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGI 270
Query: 315 TISIQDERSQ 324
Q ERSQ
Sbjct: 271 VSECQQERSQ 280
>MGI|MGI:1918830 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 MGI:MGI:1918830 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 CTD:54516 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 HSSP:Q9X183
EMBL:AK036424 EMBL:AK078897 IPI:IPI00222491 RefSeq:NP_780583.1
UniGene:Mm.55082 ProteinModelPortal:Q8BJU9 SMR:Q8BJU9 STRING:Q8BJU9
PhosphoSite:Q8BJU9 PRIDE:Q8BJU9 Ensembl:ENSMUST00000019908
GeneID:108853 KEGG:mmu:108853 UCSC:uc007egi.1
GeneTree:ENSGT00390000011879 InParanoid:Q8BJU9 OMA:GEAGGYK
NextBio:361387 Bgee:Q8BJU9 Genevestigator:Q8BJU9 Uniprot:Q8BJU9
Length = 373
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 98/223 (43%), Positives = 142/223 (63%)
Query: 102 KLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXX 161
+L + L+SE K++E+ +SL+++ E++D+ +A E+ L +
Sbjct: 56 QLAAAARLLSE---KERELRDTESLLHD--ENEDLKKLAESEIALCQKQITELKHQIISL 110
Query: 162 XXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 221
P ++ D D ILEV AG GG+EA LF ++F MY++Y+ K W FE + S+L G
Sbjct: 111 LVPSEEMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGL 170
Query: 222 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 281
+ ASA++ G Y +KFE G+HRVQRVP TEK GR+HTS ++VAILPQ E+ + + +
Sbjct: 171 RHASASVGGPEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEIKLVINPK 230
Query: 282 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
DLRIDT R+ G+GGQH NTT+SAVR+ H+PTG+ Q ERSQ
Sbjct: 231 DLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQ 273
>UNIPROTKB|Q2KI15 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:BC112806 IPI:IPI00714066 RefSeq:NP_001039843.1
UniGene:Bt.20306 ProteinModelPortal:Q2KI15 STRING:Q2KI15
PRIDE:Q2KI15 GeneID:534354 KEGG:bta:534354 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 InParanoid:Q2KI15 KO:K02835
OrthoDB:EOG49W2G0 NextBio:20876372 Uniprot:Q2KI15
Length = 380
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 96/230 (41%), Positives = 146/230 (63%)
Query: 96 ANKELRKLRDSMHLISELRT-KQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRX 154
A + + R + +++L + K++E+ + L+++ E++D+ +A E+ E +
Sbjct: 53 AEAQFQVRRPELVAVAKLLSDKEQELQETQHLLHD--ENEDLRKLAENEITSCEKEIAQL 110
Query: 155 XXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVT 214
P ++ D+ D ILEV AG GG+EA LF ++F MY++Y+ K W FE +
Sbjct: 111 KHQIILLLVPSEETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYF 170
Query: 215 ESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEV 274
S++ G + ASA+I G Y +KFE G+HRVQRVP TEK GR+HTS ++VAILPQ E+
Sbjct: 171 PSEIGGLRHASASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEI 230
Query: 275 DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
++ + +DLRIDT R+ G+GGQH NTT+SAVR+ H+PTG+ Q ERSQ
Sbjct: 231 NLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQ 280
>TAIR|locus:2099137 [details] [associations]
symbol:APG3 "AT3G62910" species:3702 "Arabidopsis
thaliana" [GO:0003747 "translation release factor activity"
evidence=IGI;ISS] [GO:0006415 "translational termination"
evidence=IGI;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009658 "chloroplast organization" evidence=IMP;NAS]
[GO:0010027 "thylakoid membrane organization" evidence=RCA;IMP]
[GO:0032544 "plastid translation" evidence=IGI] [GO:0006783 "heme
biosynthetic process" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
process" evidence=RCA] [GO:0034660 "ncRNA metabolic process"
evidence=RCA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:3.30.160.20
GO:GO:0009658 GO:GO:0010027 GO:GO:0003747 GO:GO:0032544
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
TIGRFAMs:TIGR00019 OMA:SVMLEIR HSSP:P07012 EMBL:AY090253
EMBL:AY125535 EMBL:AB109893 IPI:IPI00529197 RefSeq:NP_191850.2
UniGene:At.28015 ProteinModelPortal:Q8RX79 SMR:Q8RX79 STRING:Q8RX79
PaxDb:Q8RX79 PRIDE:Q8RX79 EnsemblPlants:AT3G62910.1 GeneID:825466
KEGG:ath:AT3G62910 TAIR:At3g62910 InParanoid:Q8RX79
PhylomeDB:Q8RX79 ProtClustDB:CLSN2690621 Genevestigator:Q8RX79
Uniprot:Q8RX79
Length = 422
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 108/302 (35%), Positives = 174/302 (57%)
Query: 31 LHQRWFVQRAAATPS---LSNF---RSYSTEMLSNDLIKIMEQRVLAIERRSACLENLVN 84
LH F R+ +PS L ++ RS T L + +++ ++E+ L +
Sbjct: 17 LHSSPFTLRSRKSPSGVCLVSWPPSRSRRTRRLVCMAEPYLIRKMESVEKTWKELSVKLA 76
Query: 85 QPE--ASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATE 142
P+ ++ +EY K + + +L + + + + +K++ K L E +D+DM +M
Sbjct: 77 DPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDMAEMIGS 136
Query: 143 ELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQ 202
E+ E + P D D R+ +LEVRAGTGG+EA+++ D+ +MY+RYS+
Sbjct: 137 EINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVRMYQRYSE 196
Query: 203 KKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSA 262
+ WKF +V +E++ GYK I G VY KLK+ESG+HRVQRVP TE GRVHTS
Sbjct: 197 RSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTST 256
Query: 263 VSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDER 322
+VAI+P+ADEV+V + +D+ + + RSGG+GGQ+ N +A+ + H P+G+ I +ER
Sbjct: 257 ATVAIMPEADEVEVVIDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIRIFCTEER 316
Query: 323 SQ 324
+Q
Sbjct: 317 TQ 318
>UNIPROTKB|E2RAT2 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:AAEX03013173
RefSeq:XP_848713.1 ProteinModelPortal:E2RAT2
Ensembl:ENSCAFT00000007724 GeneID:485465 KEGG:cfa:485465
NextBio:20859471 Uniprot:E2RAT2
Length = 444
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 109/271 (40%), Positives = 155/271 (57%)
Query: 61 LIKIMEQRVLAIERRSACLENL-VNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
L K ME CL++L VN E ++ + EL L I E +E
Sbjct: 74 LQKYMEDLNKEYRTLDQCLQHLSVN--EGDRKSLNRRHAELAPLAAIYQEIQEAEQAIEE 131
Query: 120 IDGL-KSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVR 178
+D + KSL + ++K + ++A EE ++ PK+ D+ D I+EV
Sbjct: 132 LDSMCKSLSKQ--DEKQLQELALEERQTIAEKINVLYSELFQSLVPKEKYDKNDVIIEVT 189
Query: 179 AG--TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 236
+G TGG+ F ++F MY+ YS K WKFE++ T +D G A+A ISG VY
Sbjct: 190 SGRTTGGDICQQFTREIFDMYQNYSSYKNWKFELLNYTPADYGGLHHAAARISGDNVYKH 249
Query: 237 LKFESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 293
LK+E G+HRVQR+P L+ + R+HT +SV +LPQ DEVDV++ +DLRIDT+R+ G+
Sbjct: 250 LKYEGGVHRVQRIPEVGLSARMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGA 309
Query: 294 GGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
GGQH NTT+SAVR+ HIPTG+ + Q ERSQ
Sbjct: 310 GGQHVNTTDSAVRLVHIPTGLVVECQQERSQ 340
>UNIPROTKB|F1RJ87 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:CU062515
RefSeq:NP_001230509.1 UniGene:Ssc.41357 Ensembl:ENSSSCT00000010343
GeneID:100155739 KEGG:ssc:100155739 Uniprot:F1RJ87
Length = 446
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 106/270 (39%), Positives = 154/270 (57%)
Query: 61 LIKIMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEI 120
L K ME + CL++ ++ PE ++ + EL L I E +E+
Sbjct: 76 LQKYMEDLSKEYQTLDRCLQH-ISAPEGDRRSLNRRHAELAPLAVIYKEIQEAEQAIEEL 134
Query: 121 DGL-KSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRA 179
+ + KSL + ++K + ++A EE + PK+ D+ D ILEV +
Sbjct: 135 ESMCKSLNKQ--DEKQLQELALEEKRTIAQKINMLYHELFQSLVPKEKYDKNDVILEVTS 192
Query: 180 G--TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 237
G TGG+ F ++F MY+ YS K W FE++ T +D G A+A ISG VY L
Sbjct: 193 GRTTGGDICQQFTREIFDMYQNYSSYKHWTFELLNYTPADYGGLHHAAARISGANVYKHL 252
Query: 238 KFESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 294
K+E GIHRVQR+P L+ + R+HT +SV +LPQ DEVDV++ +DLRIDT+R+ G+G
Sbjct: 253 KYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGAG 312
Query: 295 GQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
GQH NTT+SAVR+ H+PTG+ + Q ERSQ
Sbjct: 313 GQHVNTTDSAVRLVHVPTGLVVECQQERSQ 342
>UNIPROTKB|B4DG01 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
EMBL:AL354696 HOGENOM:HOG000074815 HOVERGEN:HBG017071 OMA:VWLFRHP
UniGene:Hs.382176 HGNC:HGNC:7469 EMBL:AK294343 IPI:IPI00909024
SMR:B4DG01 STRING:B4DG01 Ensembl:ENST00000430347 UCSC:uc010tff.2
Uniprot:B4DG01
Length = 468
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 115/281 (40%), Positives = 163/281 (58%)
Query: 54 TEML--SNDLIKIMEQRVLAIERRSACLENL-VNQPEASPAEYSKANKELRKLRDSMHLI 110
T+ML L K ME + CL+++ VN E + ++ + EL L I
Sbjct: 79 TKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVN--EENRRSLNRRHAELAPLAAIYQEI 136
Query: 111 SELRTKQKEIDGL-KSLIYECSEDKDMLDMATEELCLAIDEE-KRXXXXXXXXXXPKDDA 168
E +E++ + KSL + ++K + ++A EE ID++ PK+
Sbjct: 137 QETEQAIEELESMCKSLNKQ--DEKQLQELALEER-QTIDQKINMLYNELFQSLVPKEKY 193
Query: 169 DERDCILEVRAG--TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 226
D+ D ILEV AG TGG+ F ++F MY+ YS K W+FE++ T +D G A+A
Sbjct: 194 DKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAA 253
Query: 227 AISGVGVYGKLKFESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 283
ISG GVY LK+E GIHRVQR+P L+ + R+HT +SV +LPQ DEVDV+L +DL
Sbjct: 254 RISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDL 313
Query: 284 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
RIDT+R+ G+GGQH N T+SAVR+ HIPTG+ + Q ERSQ
Sbjct: 314 RIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQ 354
>UNIPROTKB|O75570 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=TAS] [GO:0006449 "regulation of
translational termination" evidence=TAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0006449 GO:GO:0016149 EMBL:AL354696
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
CTD:9617 OrthoDB:EOG48KRBQ EMBL:AF072934 EMBL:BC042196
IPI:IPI00026157 RefSeq:NP_004285.2 UniGene:Hs.382176
ProteinModelPortal:O75570 SMR:O75570 IntAct:O75570 STRING:O75570
PhosphoSite:O75570 PRIDE:O75570 Ensembl:ENST00000379477
Ensembl:ENST00000379480 Ensembl:ENST00000452359 GeneID:9617
KEGG:hsa:9617 UCSC:uc001uxx.3 GeneCards:GC13M041790 HGNC:HGNC:7469
HPA:HPA043316 MIM:604601 neXtProt:NX_O75570 PharmGKB:PA31273
InParanoid:O75570 PhylomeDB:O75570 GenomeRNAi:9617 NextBio:36079
ArrayExpress:O75570 Bgee:O75570 CleanEx:HS_MTRF1
Genevestigator:O75570 GermOnline:ENSG00000120662 Uniprot:O75570
Length = 445
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 115/281 (40%), Positives = 163/281 (58%)
Query: 54 TEML--SNDLIKIMEQRVLAIERRSACLENL-VNQPEASPAEYSKANKELRKLRDSMHLI 110
T+ML L K ME + CL+++ VN E + ++ + EL L I
Sbjct: 66 TKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVN--EENRRSLNRRHAELAPLAAIYQEI 123
Query: 111 SELRTKQKEIDGL-KSLIYECSEDKDMLDMATEELCLAIDEE-KRXXXXXXXXXXPKDDA 168
E +E++ + KSL + ++K + ++A EE ID++ PK+
Sbjct: 124 QETEQAIEELESMCKSLNKQ--DEKQLQELALEER-QTIDQKINMLYNELFQSLVPKEKY 180
Query: 169 DERDCILEVRAG--TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 226
D+ D ILEV AG TGG+ F ++F MY+ YS K W+FE++ T +D G A+A
Sbjct: 181 DKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAA 240
Query: 227 AISGVGVYGKLKFESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 283
ISG GVY LK+E GIHRVQR+P L+ + R+HT +SV +LPQ DEVDV+L +DL
Sbjct: 241 RISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDL 300
Query: 284 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
RIDT+R+ G+GGQH N T+SAVR+ HIPTG+ + Q ERSQ
Sbjct: 301 RIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQ 341
>UNIPROTKB|P66016 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842576 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 PIR:G70773 RefSeq:NP_215815.1 RefSeq:NP_335786.1
RefSeq:YP_006514676.1 ProteinModelPortal:P66016 SMR:P66016
PRIDE:P66016 EnsemblBacteria:EBMYCT00000003633
EnsemblBacteria:EBMYCT00000071350 GeneID:13319881 GeneID:886948
GeneID:924722 KEGG:mtc:MT1338 KEGG:mtu:Rv1299 KEGG:mtv:RVBD_1299
PATRIC:18124710 TubercuList:Rv1299 OMA:VEIHAND Uniprot:P66016
Length = 357
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 98/244 (40%), Positives = 152/244 (62%)
Query: 88 ASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLA 147
++PAE + + +L + +L + + +++ + L+ S++ ++A E +
Sbjct: 29 SNPAEARRVGRRFARLAPIVATHRKLTSARDDLETARELV--ASDESFAAEVAALEARVG 86
Query: 148 -IDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGW 206
+D + P+D D D +LEV++G GGEE++LFA D+ +MY RY+++ GW
Sbjct: 87 ELDAQ------LTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYIRYAERHGW 140
Query: 207 KFEVVGVTESDLRGYKEASAAISGV-----GVYGKLKFESGIHRVQRVPLTEKSGRVHTS 261
V+ T SDL GYK+A+ AI+ GV+ ++KFE G+HRVQRVP+TE GRVHTS
Sbjct: 141 AVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPVTESQGRVHTS 200
Query: 262 AVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQD 320
A V + P+ +EV V++ DLRID +RS G GGQ NTT+SAVR+TH+PTG+ ++ Q+
Sbjct: 201 AAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQN 260
Query: 321 ERSQ 324
ERSQ
Sbjct: 261 ERSQ 264
>MGI|MGI:2384815 [details] [associations]
symbol:Mtrf1 "mitochondrial translational release factor 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006415 "translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
MGI:MGI:2384815 GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP OrthoDB:EOG48KRBQ
EMBL:AK043981 EMBL:BC028898 IPI:IPI00169629 RefSeq:NP_666072.3
UniGene:Mm.35306 ProteinModelPortal:Q8K126 SMR:Q8K126 STRING:Q8K126
PhosphoSite:Q8K126 PRIDE:Q8K126 Ensembl:ENSMUST00000022600
GeneID:211253 KEGG:mmu:211253 UCSC:uc007usw.1 InParanoid:Q8K126
NextBio:373184 Bgee:Q8K126 CleanEx:MM_MTRF1 Genevestigator:Q8K126
GermOnline:ENSMUSG00000022022 Uniprot:Q8K126
Length = 446
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 108/271 (39%), Positives = 157/271 (57%)
Query: 61 LIKIMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEI 120
L K ME + CL+ +++ E + + +L L I E +E+
Sbjct: 76 LQKYMEDLNKEYQTLDQCLQG-ISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEEL 134
Query: 121 DGL-KSLIYECSEDKDMLDMATEELCLAIDEE-KRXXXXXXXXXXPKDDADERDCILEVR 178
+ L KSL + ++K + ++ +EE + ID++ R PK+ D D ILEV
Sbjct: 135 ESLCKSLNKQ--DEKQLQELVSEERQI-IDQKIHRLYSELLERLVPKEKYDWSDVILEVT 191
Query: 179 AG--TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 236
+G TGG+ F ++F MY+ YS K WKFE++ T +D G A+A ISG VY
Sbjct: 192 SGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKH 251
Query: 237 LKFESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 293
LK+E GIHRVQR+P L+ + R+HT +SV +LPQ DEVDV++ +DLR+DT+R+ G+
Sbjct: 252 LKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGA 311
Query: 294 GGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
GGQH NTT+SAVR+ HIPTG+ + Q ERSQ
Sbjct: 312 GGQHVNTTDSAVRLVHIPTGLVVECQQERSQ 342
>UNIPROTKB|E2QTM1 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
Ensembl:ENSCAFT00000000841 Uniprot:E2QTM1
Length = 381
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 97/227 (42%), Positives = 142/227 (62%)
Query: 102 KLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXX 161
+L + L+SE K++E+ + L+ + E++D+ +A E+ KR
Sbjct: 63 ELLAAAQLLSE---KERELQETEQLLRD--ENEDLRKLAENEMT---SSSKRGVIFLYLQ 114
Query: 162 XX----PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESD 217
P ++ D+ D ILEV AG GG+EA LF ++F MY++Y+ K W FE + S+
Sbjct: 115 IILLLVPSEETDKNDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSE 174
Query: 218 LRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR 277
+ G + ASA+I G+ Y +KFE G+HRVQRVP TEK GR+HTS ++VAILPQ E+++
Sbjct: 175 IGGLRHASASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLV 234
Query: 278 LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
+ +DLRI T R+ G+GGQH NTT+SAVR+ H+PTG+ Q ERSQ
Sbjct: 235 INPKDLRIHTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQ 281
>UNIPROTKB|Q3MHI7 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 GeneTree:ENSGT00390000011879
EMBL:BC105224 IPI:IPI00698094 RefSeq:NP_001030185.1
UniGene:Bt.37767 HSSP:P0A7I0 ProteinModelPortal:Q3MHI7
STRING:Q3MHI7 PRIDE:Q3MHI7 Ensembl:ENSBTAT00000016261 GeneID:504754
KEGG:bta:504754 CTD:9617 InParanoid:Q3MHI7 OMA:VWLFRHP
OrthoDB:EOG48KRBQ NextBio:20866812 Uniprot:Q3MHI7
Length = 447
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 98/269 (36%), Positives = 155/269 (57%)
Query: 63 KIMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEIDG 122
K +++ + + + L++ ++ AS + + +L + E++ ++ I+
Sbjct: 75 KALQKYMEDLNKEYQTLDHCLHHISASEGDRRSLTRRHAELAPLAVIYKEIQEAEQAIEE 134
Query: 123 LKSLIYECS--EDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAG 180
L+S+ + ++K + ++A EE + PK+ D+ D ILEV +G
Sbjct: 135 LESMCKSLNKQDEKQLQELALEERQTIAQKINMLYSELFQSLLPKEKYDKNDVILEVTSG 194
Query: 181 --TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 238
TGG+ F ++F MY+ YS K W+FE++ T +D G A+A ISG VY LK
Sbjct: 195 RTTGGDICQQFTREIFDMYQNYSSYKHWRFELLNYTPADYGGLHHAAARISGDNVYKHLK 254
Query: 239 FESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGG 295
+E GIHRVQR+P L+ + R+HT +SV +LP DEVDV++ +DLRIDT+R+ G+GG
Sbjct: 255 YEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPHPDEVDVKVDPKDLRIDTFRAKGAGG 314
Query: 296 QHANTTNSAVRVTHIPTGMTISIQDERSQ 324
QH NTT+SAVR+ HIPTG+ + Q ERSQ
Sbjct: 315 QHVNTTDSAVRLVHIPTGLVVECQQERSQ 343
>FB|FBgn0032486 [details] [associations]
symbol:CG5705 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=ISS]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE014134 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
KO:K02835 GeneTree:ENSGT00390000011879 HSSP:P07012 EMBL:AY061245
RefSeq:NP_609617.1 UniGene:Dm.3674 SMR:Q9VK20 IntAct:Q9VK20
MINT:MINT-821247 STRING:Q9VK20 EnsemblMetazoa:FBtr0080444
GeneID:34720 KEGG:dme:Dmel_CG5705 UCSC:CG5705-RA
FlyBase:FBgn0032486 InParanoid:Q9VK20 OMA:AEKDEDM OrthoDB:EOG46WWQX
GenomeRNAi:34720 NextBio:789875 Uniprot:Q9VK20
Length = 392
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 94/256 (36%), Positives = 150/256 (58%)
Query: 73 ERRSACLENLVNQPEA---SPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYE 129
E+ A LE+L + A + A SK+ L +L + + + R ++ I K + E
Sbjct: 29 EKLQAYLESLRQEYYAVRVNAAGNSKSYARLAQLEGVVSALEQRRVLERHITSAKDM--E 86
Query: 130 CSEDKDMLDMATEELCLAIDE-EKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASL 188
+D+DM ++ EE + +D K+ DD + I + AG GG+EA L
Sbjct: 87 AEKDEDMRELMREENEVYVDLLGKQDQALLQELLTLSDDEEYPALIFGLNAGAGGQEAML 146
Query: 189 FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 248
FA ++++MY Y + GW++E +D+ G + AS +SG + L++E+G+HRVQR
Sbjct: 147 FAQELYEMYTGYFEHMGWEWEEFASEGTDIGGLRHASLMVSGEDAFRWLRYEAGVHRVQR 206
Query: 249 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 308
VP TEKSGR+HTS S+ ++P+ ++ V + +DL+I+T R+ G+GGQH NTT+SAVR+
Sbjct: 207 VPATEKSGRMHTSTASITVIPRPADIQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIV 266
Query: 309 HIPTGMTISIQDERSQ 324
H+PTG+ + Q ERSQ
Sbjct: 267 HLPTGLAVEAQSERSQ 282
>UNIPROTKB|E1BXF8 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016149 "translation release factor activity, codon
specific" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:VWLFRHP EMBL:AADN02005497 IPI:IPI00591431
Ensembl:ENSGALT00000027399 Uniprot:E1BXF8
Length = 417
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 96/246 (39%), Positives = 145/246 (58%)
Query: 91 AEYSKANKELRKLRDSMHLISELRTKQKEIDGL--KSLIYECSEDKDMLDMATEELCLAI 148
A+ S +++R++ + EL T +E+D K L+ E+K+ LD LC +
Sbjct: 80 ADLSPVATAFQEIREAESELQELETMCRELDSRDEKQLLELALEEKETLDKKINTLCRKL 139
Query: 149 DEEKRXXXXXXXXXXPKDDADERDCILEVRAG--TGGEEASLFAVDVFKMYERYSQKKGW 206
+ PK+ D+ ILEV AG TGG+ F ++F+MY+ Y+ K W
Sbjct: 140 FQ----------LLVPKEKYDKSHVILEVTAGRTTGGDICQQFTKEMFEMYQNYADYKCW 189
Query: 207 KFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP---LTEKSGRVHTSAV 263
F+++ +++ G A+A ISG VY LK+E G HRVQR+P L+ + R+HT +
Sbjct: 190 TFDILNYVPAEIGGLHHAAAHISGDDVYRHLKYEGGTHRVQRIPETGLSSRMQRIHTGTM 249
Query: 264 SVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERS 323
SV +LPQ +EVDV++ +DLRIDT+R+ G+GGQH N T+SAVR+ H+PTG+ + Q ERS
Sbjct: 250 SVIVLPQPEEVDVKVDPKDLRIDTFRAKGAGGQHVNKTDSAVRIVHLPTGVVVECQQERS 309
Query: 324 QHMVKD 329
Q M K+
Sbjct: 310 QQMNKE 315
>POMBASE|SPAC2F7.17 [details] [associations]
symbol:SPAC2F7.17 "mitochondrial peptide chain release
factor (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=NAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 PomBase:SPAC2F7.17 GO:GO:0005739
EMBL:CU329670 Gene3D:3.30.160.20 GO:GO:0032543 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
PIR:S58161 RefSeq:NP_592987.1 ProteinModelPortal:Q09691
STRING:Q09691 EnsemblFungi:SPAC2F7.17.1 GeneID:2541478
KEGG:spo:SPAC2F7.17 OMA:QEANSIL OrthoDB:EOG4JWZP5 NextBio:20802577
Uniprot:Q09691
Length = 396
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 101/289 (34%), Positives = 158/289 (54%)
Query: 45 SLSNFRSYSTEMLSNDLIKIMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLR 104
S++ + YS +S LI+ + R L+ E + N+ +++ + K + +LR
Sbjct: 21 SIACKKGYSEHNVSRVLIE--KARSLSSEYLQ--FHQVNNKDQSAMTNDTDLAKRIARLR 76
Query: 105 DSMHLISELRTKQKEIDGLKSLIYECSE-DKDMLDMATEELCLAIDEEKRXXXXXXXXXX 163
+ S+ ++ ++I LK + E E D ++ MA E+ ++ +
Sbjct: 77 RVHNAYSKFKSLSEQISDLKQM--EAQESDAEVKMMAVTEINEISNKIPKSIEDLENTLL 134
Query: 164 PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTE-SDLRGYK 222
P+ D+ ++E+R G GG EA++FA ++ +MY +Y+ KGW + + + L
Sbjct: 135 PQADSYALPALIEIRPGVGGTEAAIFANELVEMYFQYANFKGWNCKFISKSAVQGLEAIT 194
Query: 223 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA--DEVDVRLRN 280
EA +I G G YG L E G+HRVQR P TE GRVHTS SV +LPQ DE +
Sbjct: 195 EAIFSIEGEGAYGHLMLEGGVHRVQRTPATETKGRVHTSTASVIVLPQVSNDESSSLYDS 254
Query: 281 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVKD 329
+++I+ RS G+GGQH N T SAVR+THIPTG+T+S+QD RSQH K+
Sbjct: 255 SEVKIEVMRSRGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQNKE 303
>TIGR_CMR|CHY_0163 [details] [associations]
symbol:CHY_0163 "peptide chain release factor 2,
programmed frameshift" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0003747 "translation release factor
activity" evidence=ISS] [GO:0006415 "translational termination"
evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR Gene3D:3.30.160.20
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_359035.1 ProteinModelPortal:Q3AFP9 STRING:Q3AFP9
GeneID:3727359 KEGG:chy:CHY_0163 PATRIC:21273511 Uniprot:Q3AFP9
Length = 371
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 98/272 (36%), Positives = 155/272 (56%)
Query: 63 KIMEQRV-LAIERRSACLENLVN---QPEA--SPAEYSKANKELRKLRDSMHLISELRTK 116
KI E RV L I + +E L +P+ + E K KEL +L+D + EL
Sbjct: 15 KIEEMRVSLDIPGKKELVEKLTAKTYEPDFWDNYTEAQKTLKELNRLKDDIEKYEELLKA 74
Query: 117 QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILE 176
Q+E+ L L+ E E+ + L + ++ + E+ P D + I+
Sbjct: 75 QEELTVLLQLLEE--EENEELAVEAQDKAKKLMEKLHRMEIELLLSGPYD---KNSAIVS 129
Query: 177 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 236
+ AG GG EA + +++MY R+++ KG+K E++ + G K + ++ G G YG
Sbjct: 130 LHAGAGGTEAQDWVEMLYRMYTRWAEDKGYKVELIDRLLGEEAGLKSVTFSVEGFGAYGY 189
Query: 237 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQ-ADEV-DVRLRNEDLRIDTYRSGGSG 294
LK E G+HR+ R+ + SGR HTS SV +LP+ A+++ ++ L+ E+L+I+T+RSGG+G
Sbjct: 190 LKAERGVHRLIRISPFDFSGRRHTSFASVDVLPEVAEDIPEIELKEEELKIETFRSGGAG 249
Query: 295 GQHANTTNSAVRVTHIPTGMTISIQDERSQHM 326
GQH N T SAVR+TH+PTG+T+ Q+ERSQ M
Sbjct: 250 GQHVNKTESAVRITHLPTGITVVCQNERSQLM 281
>TIGR_CMR|GSU_2278 [details] [associations]
symbol:GSU_2278 "peptide chain release factor 2,
programmed frameshift" species:243231 "Geobacter sulfurreducens
PCA" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:NP_953327.1
ProteinModelPortal:Q74AS3 SMR:Q74AS3 GeneID:2686956
KEGG:gsu:GSU2278 PATRIC:22027411 ProtClustDB:CLSK828793
Uniprot:Q74AS3
Length = 372
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 90/236 (38%), Positives = 133/236 (56%)
Query: 95 KANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMAT-EELCLAIDEEKR 153
+A K LR+ LI ++ D ++ LI E E+ D AT +E+ D +R
Sbjct: 50 EAQKVLRERTRIEKLIDLWDRLNRQADDIRVLI-ELGEEAQ--DEATLDEVRALNDSLER 106
Query: 154 XXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGV 213
D+ C + + AG GG EA +A + +MY RY ++KGWK E+
Sbjct: 107 EVEGAEFQRMLSGPHDKNSCFVSINAGAGGTEAQDWAEMLLRMYLRYCERKGWKTEITDF 166
Query: 214 TESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA-D 272
D G K A+ + G YG LK E+GIHR+ R+ + + R HTS SV + P+ D
Sbjct: 167 QAGDEAGVKSATFTVDGEYAYGYLKAEAGIHRLVRISPFDSNARRHTSFASVFVFPEIED 226
Query: 273 EVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
++++++ DLR+DTYRS G+GGQH NTT+SAVR+TH+PTG+ ++ Q ERSQH+ K
Sbjct: 227 DIEIKIAESDLRVDTYRSSGAGGQHVNTTDSAVRLTHLPTGIVVACQCERSQHLNK 282
>UNIPROTKB|P07012 [details] [associations]
symbol:prfB species:83333 "Escherichia coli K-12"
[GO:0015858 "nucleoside transport" evidence=IMP] [GO:0015864
"pyrimidine nucleoside transport" evidence=IMP] [GO:0015862
"uridine transport" evidence=IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA;IDA] [GO:0006415 "translational
termination" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR Gene3D:3.30.160.20 EMBL:U28375
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 EMBL:M11520 EMBL:J03795 PIR:C65073
RefSeq:NP_417367.1 RefSeq:YP_491092.1 PDB:1GQE PDB:1MI6 PDB:1ML5
PDBsum:1GQE PDBsum:1MI6 PDBsum:1ML5 ProteinModelPortal:P07012
SMR:P07012 DIP:DIP-10559N IntAct:P07012 MINT:MINT-1238444
PaxDb:P07012 PRIDE:P07012 EnsemblBacteria:EBESCT00000002308
EnsemblBacteria:EBESCT00000016130 GeneID:12930712 GeneID:947369
KEGG:ecj:Y75_p2823 KEGG:eco:b2891 PATRIC:32121192 EchoBASE:EB0755
EcoGene:EG10762 BioCyc:EcoCyc:EG10762-MONOMER
BioCyc:ECOL316407:JW5847-MONOMER EvolutionaryTrace:P07012
Genevestigator:P07012 GO:GO:0015862 Uniprot:P07012
Length = 365
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 93/261 (35%), Positives = 150/261 (57%)
Query: 72 IERRSACLE--NLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYE 129
+E +A LE ++ N+PE + A KE L + + +++ +++ GL L E
Sbjct: 34 LEEVNAELEQPDVWNEPERAQA----LGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVE 89
Query: 130 CSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLF 189
++D++ + A EL A++E+ D AD C L+++AG+GG EA +
Sbjct: 90 -ADDEETFNEAVAELD-ALEEKLAQLEFRRMFSGEYDSAD---CYLDIQAGSGGTEAQDW 144
Query: 190 AVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRV 249
A + +MY R+++ +G+K E++ +E ++ G K + ISG YG L+ E+G+HR+ R
Sbjct: 145 ASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRK 204
Query: 250 PLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 308
+ GR HTS S + P+ D+ +D+ + DLRID YR+ G+GGQH N T SAVR+T
Sbjct: 205 SPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQHVNRTESAVRIT 264
Query: 309 HIPTGMTISIQDERSQHMVKD 329
HIPTG+ Q++RSQH KD
Sbjct: 265 HIPTGIVTQCQNDRSQHKNKD 285
>CGD|CAL0003702 [details] [associations]
symbol:orf19.1303 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0070126 "mitochondrial
translational termination" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 CGD:CAL0003702 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 EMBL:AACQ01000138
HOGENOM:HOG000074815 KO:K02835 RefSeq:XP_709944.1
ProteinModelPortal:Q59TR5 STRING:Q59TR5 GeneID:3645356
KEGG:cal:CaO19.1303 Uniprot:Q59TR5
Length = 394
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 84/209 (40%), Positives = 125/209 (59%)
Query: 129 ECSEDKDMLDMATEEL-CLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEAS 187
E ++D D+ A EEL + I + ++ P ++ CI+E+R G GG EAS
Sbjct: 105 EITDDPDLYKEAQEELKSIVIPQIEKLVSELRVKLRPPVKYADKGCIIELRPGVGGNEAS 164
Query: 188 LFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQ 247
LF D+ MY ++ + WK++++ ++ EA +I +G Y ++ ESG+HRVQ
Sbjct: 165 LFTGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQ 224
Query: 248 RVPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNED-------LRIDTYRSGGSGGQHAN 299
R+P TE GRVHTS +V +LP+ E + L++++ +RIDT R+GG GGQH N
Sbjct: 225 RIPETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVN 284
Query: 300 TTNSAVRVTHIPTGMTISIQDERSQHMVK 328
TT+SAVR+ HIPTGM + QDERSQ + K
Sbjct: 285 TTDSAVRLLHIPTGMIVIQQDERSQPLNK 313
>SGD|S000003111 [details] [associations]
symbol:MRF1 "Mitochondrial translation release factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA;IMP] [GO:0070126 "mitochondrial translational
termination" evidence=IGI;IMP] [GO:0006415 "translational
termination" evidence=IEA;IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0032543 "mitochondrial translation" evidence=IMP]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 SGD:S000003111 InterPro:IPR014720
GO:GO:0005739 EMBL:BK006941 Gene3D:3.30.160.20 GO:GO:0003747
EMBL:X99960 GO:GO:0016149 RefSeq:NP_011376.3 GeneID:852738
KEGG:sce:YGL139W EMBL:X60381 GO:GO:0070126 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 GeneTree:ENSGT00390000011879
OrthoDB:EOG4JWZP5 EMBL:Z72665 PIR:S28602 RefSeq:NP_011372.3
ProteinModelPortal:P30775 SMR:P30775 DIP:DIP-2626N IntAct:P30775
MINT:MINT-427494 STRING:P30775 PaxDb:P30775 EnsemblFungi:YGL143C
GeneID:852734 KEGG:sce:YGL143C CYGD:YGL143c OMA:PPHPFAD
NextBio:972135 Genevestigator:P30775 GermOnline:YGL143C
Uniprot:P30775
Length = 413
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 101/299 (33%), Positives = 155/299 (51%)
Query: 44 PSLSNFRSYSTEMLSNDLI--KIMEQRVLAI---ERRSACLENLVNQPEASPAEYSKANK 98
P L S +T SN I + E L + E+ A L++L + S + NK
Sbjct: 24 PLLVRLTSTTTNSKSNGSIPTQYTELSPLLVKQAEKYEAELKDL--DKDLSCGIHFDVNK 81
Query: 99 ELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXX 158
+ + S + + K+K ++ LKSL D + A +E + + +
Sbjct: 82 QKHYAKLSALTDTFIEYKEK-LNELKSLQEMIVSDPSLRAEAEQEYAELVPQYETTSSRL 140
Query: 159 XXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDL 218
P ++ +LE+R G GG EA +F ++ MY Y+ + WK+ ++ E++
Sbjct: 141 VNKLLPPHPFADKPSLLELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENES 200
Query: 219 -RGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQ-ADE--- 273
G +A +I G Y +L+FE+G+HRVQR+P TE GR HTS +V +LPQ DE
Sbjct: 201 GSGIIDAILSIEEAGSYDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAK 260
Query: 274 -VDVRLRN---EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
+D R ++R+D R+ G GGQH NTT+SAVR+THIP+G+ +S+QDERSQH K
Sbjct: 261 SIDAYERTFKPGEIRVDIMRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNK 319
>UNIPROTKB|F6V8L3 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
GO:GO:0016149 GeneTree:ENSGT00390000011879
Ensembl:ENSCAFT00000000841 EMBL:AAEX03000279 OMA:DCTISIS
Uniprot:F6V8L3
Length = 238
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 71/137 (51%), Positives = 98/137 (71%)
Query: 188 LFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQ 247
LF ++F MY++Y+ K W FE + S++ G + ASA+I G+ Y +KFE G+HRVQ
Sbjct: 2 LFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGLEAYKHMKFEGGVHRVQ 61
Query: 248 RVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 307
RVP TEK GR+HTS ++VAILPQ E+++ + +DLRI T R+ G+GGQH NTT+SAVR+
Sbjct: 62 RVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLRIHTKRASGAGGQHVNTTDSAVRI 121
Query: 308 THIPTGMTISIQDERSQ 324
H+PTG+ Q ERSQ
Sbjct: 122 VHLPTGVVSECQQERSQ 138
>TIGR_CMR|SPO_2585 [details] [associations]
symbol:SPO_2585 "peptide chain release factor 2"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.160.20 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_167798.1
ProteinModelPortal:Q5LQA8 SMR:Q5LQA8 GeneID:3194310
KEGG:sil:SPO2585 PATRIC:23378573 Uniprot:Q5LQA8
Length = 375
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 88/243 (36%), Positives = 138/243 (56%)
Query: 89 SPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSL-IYECSEDKDMLDMATEELCLA 147
+P K +E + L D++ + + T D ++ + + E +D+D++ A E L
Sbjct: 47 NPENAQKLMRERQTLVDALDIYKGIETDLA--DNIELIELGEMEDDQDVIKDA--EAALK 102
Query: 148 IDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWK 207
E+ +AD D LE+ AG GG E+ +A + +MY R+++KKG+K
Sbjct: 103 ALRERAAEKELEALLD--GEADGNDTFLEINAGAGGTESCDWASMLARMYVRWAEKKGYK 160
Query: 208 FEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAI 267
E+ + D G K A+ ISG YG LK ESG+HR+ R+ + + + HTS SV +
Sbjct: 161 VELQSESAGDEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPYDAAAKRHTSFSSVWV 220
Query: 268 LPQADE-VDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHM 326
P D+ +++ + D+RIDTYRS G+GGQH NTT+SAVR+THIPTG+ ++ E+SQH
Sbjct: 221 YPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVT-SSEKSQHQ 279
Query: 327 VKD 329
+D
Sbjct: 280 NRD 282
>TIGR_CMR|APH_0479 [details] [associations]
symbol:APH_0479 "peptide chain release factor 2,
programmed frameshift" species:212042 "Anaplasma phagocytophilum
HZ" [GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1186 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 RefSeq:YP_505078.1 ProteinModelPortal:Q2GKM3
STRING:Q2GKM3 GeneID:3930254 KEGG:aph:APH_0479 PATRIC:20949594
ProtClustDB:CLSK747346 Uniprot:Q2GKM3
Length = 376
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 95/279 (34%), Positives = 145/279 (51%)
Query: 57 LSNDLIKIMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLRDSMHL---ISEL 113
+ DL I R L I + LE+L + +SP+ + A K L + + ++
Sbjct: 14 IGEDLASIA--RCLDIVGLESTLESL-DLECSSPSLWDDAEKAKSLLSERSRVSAVLTSF 70
Query: 114 RTKQKEIDGLKSL--IYECSEDKDMLDMATEELC---LAIDEEKRXXXXXXXXXXPKDDA 168
R +KE L L + S+D+D L EL L I ++K +A
Sbjct: 71 RVLEKEHKDLAELAEMISDSDDRDFLATINAELQSLKLRISQKKTECMFSH-------EA 123
Query: 169 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQK-KGWKFEVVGVTESDLRGYKEASAA 227
D C L +R+G GG E+S + + +MY ++++ + E V + + G K +
Sbjct: 124 DANSCFLTIRSGAGGTESSDWVCMLLRMYTKWAESFHEFTVETVDSVDGEETGLKAVTVK 183
Query: 228 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQAD-EVDVRLRNEDLRID 286
I G+G YG + ESGIHR+ R+ + + + HTS SV + P D E+D+++ +DLRID
Sbjct: 184 ICGIGAYGWARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVVDHEIDIKILEKDLRID 243
Query: 287 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQH 325
TYR+ G+GGQH N T SAVR+THIP+GM + Q RSQH
Sbjct: 244 TYRASGAGGQHVNKTESAVRITHIPSGMVVQCQTSRSQH 282
>TIGR_CMR|ECH_0705 [details] [associations]
symbol:ECH_0705 "peptide chain release factor 2,
programmed frameshift" species:205920 "Ehrlichia chaffeensis str.
Arkansas" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 eggNOG:COG1186
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_507510.1
ProteinModelPortal:Q2GGC3 STRING:Q2GGC3 GeneID:3927613
KEGG:ech:ECH_0705 PATRIC:20576858 ProtClustDB:CLSK748740
Uniprot:Q2GGC3
Length = 366
Score = 336 (123.3 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 64/162 (39%), Positives = 105/162 (64%)
Query: 166 DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQ-KKGWKFEVVGVTESDLRGYKEA 224
++AD DC +E+++G GG E++ ++ +F+MY R+++ +K E+V + + G K A
Sbjct: 120 NEADHNDCFIEIQSGAGGTESNDWSSMLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSA 179
Query: 225 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDL 283
+ + G YG K ESGIHR+ R+ + + HT+ S+ + P +E ++ + ++DL
Sbjct: 180 TIKVIGDNAYGWAKTESGIHRLVRISPFNSNAKRHTTFSSILVSPVINEDTNIEILDKDL 239
Query: 284 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQH 325
RIDTYR+ G+GGQH N T SAVR+THIP+G+ + Q+ RSQH
Sbjct: 240 RIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNNRSQH 281
Score = 44 (20.5 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 20 SSSSISHRNPLLHQRWFVQRAAATPSLSNFR------SYSTEMLS---NDLIKIMEQ 67
SS+S+ N L QR +RA + +L++F +Y TE+LS ND +++ +
Sbjct: 42 SSTSLWDDNSLA-QRILCERARISKTLNSFTELEEEYNYYTELLSVINNDTDELLNE 97
>TAIR|locus:2010748 [details] [associations]
symbol:AT1G56350 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0048825
"cotyledon development" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:SAVRITY
IPI:IPI00540527 RefSeq:NP_176032.2 UniGene:At.42791
ProteinModelPortal:F4I532 SMR:F4I532 PRIDE:F4I532
EnsemblPlants:AT1G56350.1 GeneID:842089 KEGG:ath:AT1G56350
Uniprot:F4I532
Length = 482
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 88/244 (36%), Positives = 132/244 (54%)
Query: 90 PAEYSKANKELRKLRDSMHLISELRTKQKE-IDGLKSLIYECSEDKDMLDMATEELCLAI 148
P K ++E L M + + E ID LK E+ D ++ +E L I
Sbjct: 158 PTHAGKISREHGSLTGKMKGVMTFERELLEHIDMLKL----AKEENDS-ELESETLKALI 212
Query: 149 DEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKF 208
D +R D D C +EV+AG GG E++ +A V +MY+ ++Q++ +
Sbjct: 213 DM-RRVSKEKELEALLSADNDPCSCYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSV 271
Query: 209 EVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAIL 268
VV ++ G K A+ ++G YG K E G+HR+ R+ + R HTS +VA++
Sbjct: 272 TVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 331
Query: 269 PQADEVDVR--LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHM 326
P + R + + DLRI+ +RSGG+GGQHANTT+SAVR+ HIPTG+T + Q+ERSQH
Sbjct: 332 PILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHS 391
Query: 327 VKDS 330
K S
Sbjct: 392 NKAS 395
>TIGR_CMR|CJE_1628 [details] [associations]
symbol:CJE_1628 "peptide chain release factor 2"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1186
GO:GO:0016149 RefSeq:YP_179609.1 ProteinModelPortal:Q5HSX6
STRING:Q5HSX6 GeneID:3232256 KEGG:cjr:CJE1628 PATRIC:20045053
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
BioCyc:CJEJ195099:GJC0-1658-MONOMER PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 Uniprot:Q5HSX6
Length = 365
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 65/161 (40%), Positives = 104/161 (64%)
Query: 169 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 228
D ++ I+ + G GG E++ +A +++MY R+ +++G+K E + E + G K+ S +
Sbjct: 123 DGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLV 182
Query: 229 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDT 287
G YG LK E+GIHR+ R + +GR HTS SV + P+ D+ +++ + +D+RID
Sbjct: 183 KGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDY 242
Query: 288 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
YR+ G+GGQH N T SAVR+TH PTG+ + Q++RSQH K
Sbjct: 243 YRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNK 283
>ASPGD|ASPL0000035902 [details] [associations]
symbol:AN3462 species:162425 "Emericella nidulans"
[GO:0070126 "mitochondrial translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:BN001306 GO:GO:0016149 HOGENOM:HOG000074815
OMA:QCQAGNA EnsemblFungi:CADANIAT00009571 Uniprot:C8VHA3
Length = 418
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 92/292 (31%), Positives = 144/292 (49%)
Query: 52 YSTEMLSNDLIKIMEQRVLAIERRSACLE-NLVNQPEAS-PAEYSKANKELRKLRDSMHL 109
Y L D K++ +L R A NL NQ S + ++ EL + +
Sbjct: 26 YQRRGLQTD--KLLSPALLTRARNLAAEHANLSNQLTTSFDPKIARRAGELGPVAKAW-- 81
Query: 110 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDAD 169
+E + + L S++ + + ++ +A EEL + P+
Sbjct: 82 -AEWSNANESMSELHSMLEDPDTEAELRSIAVEELQTTEAKLTAISDNLKRALVPRHPFA 140
Query: 170 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG--YKEASAA 227
+ C+LE+R G GG+EAS+FA ++ +MY + +G + ++ + D R EA
Sbjct: 141 DLSCLLEIRPGAGGDEASIFAFELLQMYVAFCAHQGLRSTLMKLERGDNRADALTEAVLE 200
Query: 228 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEV------------- 274
+ G Y L+ ESG+HRVQRVP TE GR HTSAVSV +LP +
Sbjct: 201 VEAEGAYDLLRTESGVHRVQRVPTTEAKGRTHTSAVSVMVLPSFPDTGGGDGAFNFDDPN 260
Query: 275 -DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQH 325
D + +++R + R+ G+GGQH N T SA+R+TH+PTG+ +S+QD RSQH
Sbjct: 261 SDYYIDPQEVRTEKMRASGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQH 312
>WB|WBGene00020993 [details] [associations]
symbol:W03F8.3 species:6239 "Caenorhabditis elegans"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
GeneTree:ENSGT00390000011879 EMBL:FO080652 PIR:T15102
RefSeq:NP_500737.1 ProteinModelPortal:O44568 SMR:O44568
STRING:O44568 PaxDb:O44568 EnsemblMetazoa:W03F8.3.1
EnsemblMetazoa:W03F8.3.2 GeneID:177294 KEGG:cel:CELE_W03F8.3
UCSC:W03F8.3 CTD:177294 WormBase:W03F8.3 InParanoid:O44568
OMA:QCQAGNA NextBio:896154 Uniprot:O44568
Length = 389
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 72/212 (33%), Positives = 127/212 (59%)
Query: 117 QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE-KRXXXXXXXXXXPKDDADERD-CI 174
+ E+ L+++I + E ++M +A ++ +I+E + P ++ D C
Sbjct: 81 RSELSQLRTIINDPKETEEMRKLAEVDV-ESIEENLETELQELAVKIVPLNNLDVLSKCQ 139
Query: 175 LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 234
+E+ G GG+EA LF ++ MY++ + WK++ + V L G + A A+SG VY
Sbjct: 140 IELSCGAGGQEAMLFTGELLDMYQKLAAVNSWKWDPLQVDNVPLGGVRSALIAVSGEKVY 199
Query: 235 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 294
K++FE+G+HRVQRVP+ + R+HTS S+++LP+ +EV V + ++ ++I+ R+ G G
Sbjct: 200 AKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVSVVVPSDSVKIEAMRASGPG 257
Query: 295 GQHANTTNSAVRVTHIPTGMTISIQDERSQHM 326
GQ+ N ++AVR+TH TG+ + DER QH+
Sbjct: 258 GQNVNKRSTAVRMTHKETGIAVHCMDERFQHL 289
>TIGR_CMR|NSE_0604 [details] [associations]
symbol:NSE_0604 "peptide chain release factor 2,
programmed frameshift" species:222891 "Neorickettsia sennetsu str.
Miyayama" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 eggNOG:COG1186 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 HOGENOM:HOG000074814
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020
RefSeq:YP_506484.1 ProteinModelPortal:Q2GDG2 STRING:Q2GDG2
GeneID:3931929 KEGG:nse:NSE_0604 PATRIC:22681243 OMA:SAVRITY
ProtClustDB:CLSK2527643 Uniprot:Q2GDG2
Length = 365
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 85/287 (29%), Positives = 158/287 (55%)
Query: 52 YSTEMLSNDLIKIME--QRVLAIERRSACLEN---LVNQPEASPAEYSKAN---KELRKL 103
+ T+++ ++L K +E +R L IE++ + LE LV+ P + S+A KE ++
Sbjct: 3 FETQVVLHNLKKSVEVIRRQLDIEKKHSRLEEIQALVDSPTLWE-DQSRAQLLLKEKSQI 61
Query: 104 RDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXX 163
S+ EL + ++ + L + E++ M D+ E L L +K+
Sbjct: 62 ETSLKEFKELSIQLDDLIEMIELASKDHEEETMKDLERELLLLKEKIQKKEIECLFSG-- 119
Query: 164 PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQ-KKGWKFEVVGVTESDLRGYK 222
+AD DC+LE+++G GG E++ +A+ + +MY R+++ ++ ++V E + G K
Sbjct: 120 ---EADGNDCLLEIQSGAGGTESNDWAMMLLRMYTRWAEIYHKFQVQIVDKVEGEETGIK 176
Query: 223 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQAD-EVDVRLRNE 281
+ + G YG + E+G+HR+ R+ + + + HTS + + P + E+++ + +
Sbjct: 177 SCTLKVMGKNAYGWARTETGVHRLVRISPFDANAKRHTSFAKIFVSPCIEGEINISIDEK 236
Query: 282 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
DL+IDTYR+ G+GGQH N T SA+R+TH+P+ + + Q RSQH K
Sbjct: 237 DLKIDTYRASGAGGQHVNKTESAIRITHLPSKIVVQSQSSRSQHQNK 283
>DICTYBASE|DDB_G0288835 [details] [associations]
symbol:prfB "class I peptide chain release factor"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 dictyBase:DDB_G0288835
GO:GO:0005737 Gene3D:3.30.160.20 GenomeReviews:CM000154_GR
eggNOG:COG1186 EMBL:AAFI02000125 GO:GO:0016149
PANTHER:PTHR11075:SF6 RefSeq:XP_636549.1 ProteinModelPortal:Q54IC8
STRING:Q54IC8 EnsemblProtists:DDB0237485 GeneID:8626834
KEGG:ddi:DDB_G0288835 InParanoid:Q54IC8 OMA:LINESHN Uniprot:Q54IC8
Length = 424
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 67/167 (40%), Positives = 104/167 (62%)
Query: 165 KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 224
KDD+ + C+LE++AG GG ++ + +F+MY ++ +KG+ E++ + + GY+ A
Sbjct: 179 KDDS--KGCLLEIQAGAGGNDSMDWTKILFEMYCKWGARKGYNVEIIDTADGEF-GYRHA 235
Query: 225 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDL 283
S I G YG L+ E GIHR+ R+ SG+ HTS SV + P +D+ + + + +DL
Sbjct: 236 SLKIDGHNAYGWLRTEMGIHRLIRISPFSSSGKRHTSFASVVVYPISDDSIKINIDPKDL 295
Query: 284 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVKDS 330
+T RS G+GGQH N T SAVR+ HIPTG+++ ERSQH K +
Sbjct: 296 HFETLRSSGAGGQHVNKTESAVRIVHIPTGISVLSSSERSQHQNKSN 342
>ZFIN|ZDB-GENE-050220-8 [details] [associations]
symbol:zgc:113104 "zgc:113104" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 ZFIN:ZDB-GENE-050220-8
GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149 HOGENOM:HOG000074815
KO:K02835 EMBL:BC090173 IPI:IPI00484442 RefSeq:NP_001012512.1
UniGene:Dr.77520 ProteinModelPortal:Q5EB09 GeneID:503530
KEGG:dre:503530 InParanoid:Q5EB09 NextBio:20866191 Uniprot:Q5EB09
Length = 235
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 64/135 (47%), Positives = 89/135 (65%)
Query: 193 VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP-- 250
+F MY+ ++ K W FE+ T ++ G AS +SG V+ LKFE G HRVQR+P
Sbjct: 1 MFDMYQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEGGTHRVQRIPEV 60
Query: 251 -LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 309
L+ + R+HT ++V +LPQ +EVD+ + +DLRIDT+RS G+GGQH NTT+SAVR+ H
Sbjct: 61 GLSSRMQRIHTGTMTVIVLPQMEEVDIDIAPKDLRIDTFRSRGAGGQHVNTTDSAVRLVH 120
Query: 310 IPTGMTISIQDERSQ 324
+PTG Q RSQ
Sbjct: 121 LPTGTVSECQQFRSQ 135
>UNIPROTKB|Q5TF45 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0003747 "translation
release factor activity" evidence=IEA] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003747 EMBL:AL080276 eggNOG:COG0216
HOGENOM:HOG000074815 UniGene:Hs.225836 HGNC:HGNC:21051
IPI:IPI00514520 SMR:Q5TF45 STRING:Q5TF45 Ensembl:ENST00000448966
Uniprot:Q5TF45
Length = 164
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 62/105 (59%), Positives = 79/105 (75%)
Query: 220 GYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLR 279
G + ASA+I G Y +KFE G+HRVQRVP TEK GRVHTS ++VAILPQ E+++ +
Sbjct: 40 GLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVIN 99
Query: 280 NEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
+DLRIDT R+ G+GGQH NTT+SAVR+ H+PTG+ Q ERSQ
Sbjct: 100 PKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQ 144
>UNIPROTKB|Q3Z8Y6 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG1186 GO:GO:0003747
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:YP_181313.1
ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6 GeneID:3230122
KEGG:det:DET0570 PATRIC:21608209 ProtClustDB:CLSK837416
Uniprot:Q3Z8Y6
Length = 362
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 87/280 (31%), Positives = 144/280 (51%)
Query: 60 DLIKIMEQRVLA--IERRSACLENLVNQPE---ASP---AEYSKANKELRKLRDSMHLIS 111
D++ ++ R+L+ + A E + + E ASP + A K ++KL + +
Sbjct: 3 DILSELKSRILSDMVRLDIAAKELEITELESASASPDFWQDQQNAQKAMKKLAANKRVSE 62
Query: 112 ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADER 171
R ++ ++ L L ED + + E+ E D R
Sbjct: 63 VWRGLEQRVNDLLELFALTHEDPSLGNEIEREVNTLTAEIDTLEVGLAFSG----QYDSR 118
Query: 172 DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 231
+ +L V AG GG E+ +A + +M+ R+++KKG+ EV+ + + G K A+ I G
Sbjct: 119 NALLTVHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGE 178
Query: 232 GVYGKLKFESGIHRVQRV-PLTEKSGRVHTSAVSVAILPQA-DEVDVRLRNEDLRIDTYR 289
YG LK E G+HR+ R+ P R HTS V ++P+A D VD+ ++ ED++ID +R
Sbjct: 179 YAYGFLKSEHGVHRLIRLSPFDADHAR-HTSFALVEVMPEAEDSVDIDIKPEDIKIDMFR 237
Query: 290 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVKD 329
S G GGQ+ ++AVRVTHIP+G+ ++ Q ERSQH ++
Sbjct: 238 SSGPGGQNVQKVSTAVRVTHIPSGIVVASQTERSQHQNRE 277
>TIGR_CMR|DET_0570 [details] [associations]
symbol:DET_0570 "peptide chain release factor 2,
programmed frameshift" species:243164 "Dehalococcoides ethenogenes
195" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG1186
GO:GO:0003747 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_181313.1 ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6
GeneID:3230122 KEGG:det:DET0570 PATRIC:21608209
ProtClustDB:CLSK837416 Uniprot:Q3Z8Y6
Length = 362
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 87/280 (31%), Positives = 144/280 (51%)
Query: 60 DLIKIMEQRVLA--IERRSACLENLVNQPE---ASP---AEYSKANKELRKLRDSMHLIS 111
D++ ++ R+L+ + A E + + E ASP + A K ++KL + +
Sbjct: 3 DILSELKSRILSDMVRLDIAAKELEITELESASASPDFWQDQQNAQKAMKKLAANKRVSE 62
Query: 112 ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADER 171
R ++ ++ L L ED + + E+ E D R
Sbjct: 63 VWRGLEQRVNDLLELFALTHEDPSLGNEIEREVNTLTAEIDTLEVGLAFSG----QYDSR 118
Query: 172 DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 231
+ +L V AG GG E+ +A + +M+ R+++KKG+ EV+ + + G K A+ I G
Sbjct: 119 NALLTVHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGE 178
Query: 232 GVYGKLKFESGIHRVQRV-PLTEKSGRVHTSAVSVAILPQA-DEVDVRLRNEDLRIDTYR 289
YG LK E G+HR+ R+ P R HTS V ++P+A D VD+ ++ ED++ID +R
Sbjct: 179 YAYGFLKSEHGVHRLIRLSPFDADHAR-HTSFALVEVMPEAEDSVDIDIKPEDIKIDMFR 237
Query: 290 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVKD 329
S G GGQ+ ++AVRVTHIP+G+ ++ Q ERSQH ++
Sbjct: 238 SSGPGGQNVQKVSTAVRVTHIPSGIVVASQTERSQHQNRE 277
>UNIPROTKB|P66026 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.30.160.20 EMBL:BX842582
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 PIR:H70919 RefSeq:NP_217621.1 RefSeq:NP_337713.1
RefSeq:YP_006516568.1 ProteinModelPortal:P66026 SMR:P66026
EnsemblBacteria:EBMYCT00000000199 EnsemblBacteria:EBMYCT00000071451
GeneID:13317912 GeneID:888820 GeneID:926714 KEGG:mtc:MT3188
KEGG:mtu:Rv3105c KEGG:mtv:RVBD_3105c PATRIC:18128778
TubercuList:Rv3105c Uniprot:P66026
Length = 371
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 81/267 (30%), Positives = 138/267 (51%)
Query: 67 QRVLAIERRSACLENLVNQPEAS-PAEYSKANKELRKLRDSMHLISELRTKQ---KEIDG 122
+RVL +E + +E L + EAS P + + R + H ELR + + +D
Sbjct: 20 ERVLDVEGLRSRIEKL--EHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRLDD 77
Query: 123 LKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKD----DADERDCILEVR 178
L ++YE + ++ A + D E + + + DER+ ++ +R
Sbjct: 78 LP-VLYELAAEE--AGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIR 134
Query: 179 AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 238
+G GG +A+ +A + +MY R++++ + EV + ++ G K A+ A+ YG L
Sbjct: 135 SGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 194
Query: 239 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQH 297
E G HR+ R+ + R TS V +LP + D + + D+R+D YRS G GGQ
Sbjct: 195 VEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQS 254
Query: 298 ANTTNSAVRVTHIPTGMTISIQDERSQ 324
NTT+SAVR+THIP+G+ ++ Q+E+SQ
Sbjct: 255 VNTTDSAVRLTHIPSGIVVTCQNEKSQ 281
>TAIR|locus:2158936 [details] [associations]
symbol:HCF109 "high chlorophyll fluorescent 109"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006415 "translational termination"
evidence=IEA;ISS;IMP] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006396 "RNA processing" evidence=IMP] [GO:0009657 "plastid
organization" evidence=IMP] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 EMBL:CP002688 GO:GO:0009570
Gene3D:3.30.160.20 GO:GO:0006396 GO:GO:0009657 GO:GO:0006415
GO:GO:0016149 EMBL:AB018112 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 HSSP:P07012
UniGene:At.9505 EMBL:AY056234 EMBL:AY117253 EMBL:AY084711
IPI:IPI00546331 RefSeq:NP_851096.1 ProteinModelPortal:Q9LVY0
SMR:Q9LVY0 STRING:Q9LVY0 PRIDE:Q9LVY0 EnsemblPlants:AT5G36170.1
GeneID:833614 KEGG:ath:AT5G36170 TAIR:At5g36170 InParanoid:Q9LVY0
OMA:MGWGSQI PhylomeDB:Q9LVY0 ProtClustDB:CLSN2680355
ArrayExpress:Q9LVY0 Genevestigator:Q9LVY0 Uniprot:Q9LVY0
Length = 456
Score = 300 (110.7 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 86/310 (27%), Positives = 147/310 (47%)
Query: 19 ESSSSISHRNPLLHQRWFVQRAAATPSLSNFRSYSTEML-SNDLIKIMEQRVLAIERRSA 77
ES+ S+S+ N W +Q S E + ++ ++ +EQ + +E ++
Sbjct: 62 ESNLSVSNENET--SEWLMQDFYTLRKDVEIASARVEEIRASANLQQLEQEITNLESKAT 119
Query: 78 CLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDML 137
++ +A S L L+D M L+SE +T ++ + + L +E+ D
Sbjct: 120 DTSFWDDRTKAQETLSS-----LNDLKDRMRLLSEFKTMVEDAETIVKL----TEEMDST 170
Query: 138 DMATEELCLAIDEE-KRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKM 196
D++ E + I +E + D+ ++ + AG GG +A +A + +M
Sbjct: 171 DVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDWADMLLRM 230
Query: 197 YERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSG 256
Y R+ +K+ +K +VV ++ + G K A+ I G YG + E G HR+ R G
Sbjct: 231 YMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQSPFNSKG 290
Query: 257 RVHTSAVSVAILPQADE--VDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGM 314
TS V ++P E V + + EDL I R+GG GGQ+ N +AVR+THIPTG+
Sbjct: 291 LRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPTGV 350
Query: 315 TISIQDERSQ 324
+ +ERSQ
Sbjct: 351 AVRCTEERSQ 360
>GENEDB_PFALCIPARUM|PF14_0265 [details] [associations]
symbol:PF14_0265 "peptide chain release factor
1, putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE014187 GO:GO:0016149 KO:K02835
RefSeq:XP_001348439.1 ProteinModelPortal:Q8ILH8
EnsemblProtists:PF14_0265:mRNA GeneID:811847 KEGG:pfa:PF14_0265
EuPathDB:PlasmoDB:PF3D7_1428600 HOGENOM:HOG000281260
ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 55/168 (32%), Positives = 93/168 (55%)
Query: 169 DERDCI-LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV-GVTESDLRGYKEASA 226
D ++ I +E R G GGEEA ++ ++ Y+ ++++ K E + +++S + KE
Sbjct: 61 DNKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENLR 120
Query: 227 AISG-----VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAIL-PQADEVDVRLRN 280
I + +Y K ESGIH+V+R+P + R+H+S +VAI + +E +
Sbjct: 121 IIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEINL 180
Query: 281 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
+DL+I T+RS GGQ+ N S V + H PTG+ Q+ER+Q + K
Sbjct: 181 KDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNK 228
>UNIPROTKB|Q8ILH8 [details] [associations]
symbol:PF14_0265 "Peptide chain release factor 1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AE014187 GO:GO:0016149 KO:K02835 RefSeq:XP_001348439.1
ProteinModelPortal:Q8ILH8 EnsemblProtists:PF14_0265:mRNA
GeneID:811847 KEGG:pfa:PF14_0265 EuPathDB:PlasmoDB:PF3D7_1428600
HOGENOM:HOG000281260 ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 55/168 (32%), Positives = 93/168 (55%)
Query: 169 DERDCI-LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV-GVTESDLRGYKEASA 226
D ++ I +E R G GGEEA ++ ++ Y+ ++++ K E + +++S + KE
Sbjct: 61 DNKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENLR 120
Query: 227 AISG-----VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAIL-PQADEVDVRLRN 280
I + +Y K ESGIH+V+R+P + R+H+S +VAI + +E +
Sbjct: 121 IIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEINL 180
Query: 281 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
+DL+I T+RS GGQ+ N S V + H PTG+ Q+ER+Q + K
Sbjct: 181 KDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNK 228
>UNIPROTKB|Q74EJ1 [details] [associations]
symbol:GSU0971 "Hydrolase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 147 (56.8 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 276 VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
V +R+ D++++ YR+ G GGQH NTT+SAVR+ H+PTG+ + + RSQ
Sbjct: 3 VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQ 51
>TIGR_CMR|GSU_0971 [details] [associations]
symbol:GSU_0971 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 147 (56.8 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 276 VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
V +R+ D++++ YR+ G GGQH NTT+SAVR+ H+PTG+ + + RSQ
Sbjct: 3 VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQ 51
>TAIR|locus:2006897 [details] [associations]
symbol:AT1G33330 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0006415 "translational termination" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=RCA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 EMBL:CP002684 GO:GO:0009507 Gene3D:3.30.160.20
GO:GO:0003747 EMBL:AC027035 EMBL:BT006129 EMBL:AK117494
IPI:IPI00545134 RefSeq:NP_174601.2 UniGene:At.28050
ProteinModelPortal:Q9C875 SMR:Q9C875 STRING:Q9C875 PRIDE:Q9C875
EnsemblPlants:AT1G33330.1 GeneID:840227 KEGG:ath:AT1G33330
TAIR:At1g33330 HOGENOM:HOG000152202 InParanoid:Q9C875 OMA:KSTIRTS
PhylomeDB:Q9C875 ProtClustDB:CLSN2680351 ArrayExpress:Q9C875
Genevestigator:Q9C875 Uniprot:Q9C875
Length = 257
Score = 123 (48.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 264 SVAILPQADEVD-VRLRNEDL----RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISI 318
SV+++ + ++ +E+L R++T+R G GGQH N +SAVR+ H+PTG+
Sbjct: 74 SVSVVSDVQSPNYLKFTDEELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQA 133
Query: 319 QDERSQH 325
++RSQH
Sbjct: 134 VEDRSQH 140
Score = 41 (19.5 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 22 SSISH-RNPLLHQRWFVQRAAATPSLSNFRSYSTEMLSNDLIKIM 65
+++ H R PLL +R +A T + N R+ ++ LS L I+
Sbjct: 7 AALFHARFPLLLRRSIPLLSAPTSVIYNHRTLLSDGLSTRLCSIL 51
>GENEDB_PFALCIPARUM|MAL7P1.20 [details] [associations]
symbol:MAL7P1.20 "peptide chain release factor,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 126 (49.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 39/140 (27%), Positives = 69/140 (49%)
Query: 170 ERDCILEVRAGTGGEEASLFAVDVFKMYERY----SQKKGWKFEVVGVTESDLRGYKEAS 225
+ C L + +GTGG EA F ++ MY +Y +K K+EV+ ++++++ G K+
Sbjct: 49 KNSCSLILSSGTGGTEACDFCNMLYNMYIKYLCRIKNRKNIKYEVIDISKNEV-GIKKVE 107
Query: 226 AAISGVGVYGKLKFESGIHR-VQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 284
I G + E GIHR V+ P ++ ++ TS V V ++P + D+ + N
Sbjct: 108 IKIDGEYSFYNFVSEKGIHRLVRNSPFNAQNKKM-TSFVKVDVIPTLNFNDLNVINF--- 163
Query: 285 IDTYRSGGSGGQHANTTNSA 304
++T GS T S+
Sbjct: 164 LNTAEGVGSSSSSKLTKESS 183
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 275 DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
D + DL I T RSGG GGQ+ N +AVR+ H PT +++ ER+Q + K
Sbjct: 218 DFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNK 271
>UNIPROTKB|Q8IC21 [details] [associations]
symbol:MAL7P1.20 "Peptide chain release factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 126 (49.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 39/140 (27%), Positives = 69/140 (49%)
Query: 170 ERDCILEVRAGTGGEEASLFAVDVFKMYERY----SQKKGWKFEVVGVTESDLRGYKEAS 225
+ C L + +GTGG EA F ++ MY +Y +K K+EV+ ++++++ G K+
Sbjct: 49 KNSCSLILSSGTGGTEACDFCNMLYNMYIKYLCRIKNRKNIKYEVIDISKNEV-GIKKVE 107
Query: 226 AAISGVGVYGKLKFESGIHR-VQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 284
I G + E GIHR V+ P ++ ++ TS V V ++P + D+ + N
Sbjct: 108 IKIDGEYSFYNFVSEKGIHRLVRNSPFNAQNKKM-TSFVKVDVIPTLNFNDLNVINF--- 163
Query: 285 IDTYRSGGSGGQHANTTNSA 304
++T GS T S+
Sbjct: 164 LNTAEGVGSSSSSKLTKESS 183
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 275 DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
D + DL I T RSGG GGQ+ N +AVR+ H PT +++ ER+Q + K
Sbjct: 218 DFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNK 271
>CGD|CAL0005347 [details] [associations]
symbol:orf19.5488 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 CGD:CAL0005347 Gene3D:3.30.160.20 GO:GO:0005622
eggNOG:COG1186 GO:GO:0003747 HOGENOM:HOG000217812 EMBL:AACQ01000196
EMBL:AACQ01000195 RefSeq:XP_711480.1 RefSeq:XP_711504.1
ProteinModelPortal:Q59P48 STRING:Q59P48 GeneID:3646889
GeneID:3646913 KEGG:cal:CaO19.12943 KEGG:cal:CaO19.5488
Uniprot:Q59P48
Length = 171
Score = 114 (45.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 24/48 (50%), Positives = 30/48 (62%)
Query: 278 LRNEDLRIDTYRSG-GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
++ ED+ G G GGQ N TNS V++THIPTGM +S Q RSQ
Sbjct: 35 IKEEDIEEKFLHGGRGPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQ 82
>UNIPROTKB|Q74FR0 [details] [associations]
symbol:GSU0546 "Peptidyl-tRNA hydrolase-related protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 100 (40.3 bits), Expect = 0.00010, P = 0.00010
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 282 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
DL RS G+GGQH N T + V++ H PTG+ + +RSQ
Sbjct: 29 DLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQ 71
>TIGR_CMR|GSU_0546 [details] [associations]
symbol:GSU_0546 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 100 (40.3 bits), Expect = 0.00010, P = 0.00010
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 282 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
DL RS G+GGQH N T + V++ H PTG+ + +RSQ
Sbjct: 29 DLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQ 71
>TAIR|locus:2082563 [details] [associations]
symbol:PrfB3 "peptide chain release factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA;ISS] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0043488 "regulation of mRNA
stability" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0009772 "photosynthetic electron transport in
photosystem II" evidence=IMP] [GO:0010190 "cytochrome b6f complex
assembly" evidence=IMP] [GO:0048255 "mRNA stabilization"
evidence=IMP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0009570 EMBL:CP002686
GO:GO:0043565 Gene3D:3.30.160.20 GO:GO:0009658 GO:GO:0048255
GO:GO:0003730 GO:GO:0009772 GO:GO:0016149 GO:GO:0010190
IPI:IPI00516531 RefSeq:NP_191278.2 UniGene:At.34857
ProteinModelPortal:F4J264 SMR:F4J264 EnsemblPlants:AT3G57190.1
GeneID:824886 KEGG:ath:AT3G57190 OMA:DIIPLFL Uniprot:F4J264
Length = 406
Score = 115 (45.5 bits), Expect = 0.00059, P = 0.00059
Identities = 52/230 (22%), Positives = 96/230 (41%)
Query: 106 SMHLISELRTKQKEIDGLKSLIYECSEDKDML---DMATEELCL---AIDEE---KRXXX 156
S ++ +L + K +D LK L Y+ E K ++ +M + L A D R
Sbjct: 95 SDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSSLDVSRSLH 154
Query: 157 XXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTE- 215
+D D + +++G+ G ++ ++ V MY +++++ G V
Sbjct: 155 HYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNARVAEKCSL 214
Query: 216 -SDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEV 274
S+ G A+ YG L E G+HR+ ++ S ++ V + L
Sbjct: 215 LSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI---ISSTSNEECSATVDIIPLFLRASP 271
Query: 275 DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
D ++ DL I +Y + H N V + HIP+G+T+ ER++
Sbjct: 272 DFEVKEGDL-IVSYPAKED---HKIAENM-VCIHHIPSGVTLQSSGERNR 316
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 330 320 0.00084 116 3 11 23 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 69
No. of states in DFA: 608 (65 KB)
Total size of DFA: 207 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.38u 0.12s 28.50t Elapsed: 00:00:01
Total cpu time: 28.39u 0.12s 28.51t Elapsed: 00:00:02
Start: Mon May 20 23:32:21 2013 End: Mon May 20 23:32:23 2013