BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020135
(330 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|C3PNN0|RF1_RICAE Peptide chain release factor 1 OS=Rickettsia africae (strain ESF-5)
GN=prfA PE=3 SV=1
Length = 355
Score = 267 bits (683), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 191/274 (69%), Gaps = 13/274 (4%)
Query: 57 LSNDLIKIMEQRVLAIERRSACLENLVNQPEAS--PAEYSKANKELRKLRDSMHLISELR 114
S++L KI+++ ENL N+ + E+ KA+KE +L D + I E
Sbjct: 3 FSDNLAKILDK-----------YENLGNKLSSGIMGDEFVKASKEYAELEDVVAKIKEYN 51
Query: 115 TKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCI 174
+ E++ + E D L+M +E+ + +L+ + +LLPKDDAD + I
Sbjct: 52 KAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAI 111
Query: 175 LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 234
+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I G V+
Sbjct: 112 IEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVF 171
Query: 235 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 294
KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR+ G+G
Sbjct: 172 SKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAG 231
Query: 295 GQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
GQH NTT+SAVR+THIPTG+T+++QDE+SQH K
Sbjct: 232 GQHVNTTDSAVRITHIPTGITVALQDEKSQHKNK 265
>sp|A8GSC7|RF1_RICRS Peptide chain release factor 1 OS=Rickettsia rickettsii (strain
Sheila Smith) GN=prfA PE=3 SV=1
Length = 355
Score = 267 bits (682), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 191/274 (69%), Gaps = 13/274 (4%)
Query: 57 LSNDLIKIMEQRVLAIERRSACLENLVNQPEAS--PAEYSKANKELRKLRDSMHLISELR 114
S++L KI+++ ENL N+ + E+ KA+KE +L D + I E
Sbjct: 3 FSDNLAKILDK-----------YENLGNKLSSGIMGDEFVKASKEYAELEDVVAKIKEYN 51
Query: 115 TKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCI 174
+ E++ + E D L+M +E+ + +L+ + +LLPKDDAD + I
Sbjct: 52 KAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAI 111
Query: 175 LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 234
+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I G V+
Sbjct: 112 IEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVF 171
Query: 235 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 294
KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR+ G+G
Sbjct: 172 SKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAG 231
Query: 295 GQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
GQH NTT+SAVR+THIPTG+T+++QDE+SQH K
Sbjct: 232 GQHVNTTDSAVRITHIPTGITVALQDEKSQHKNK 265
>sp|B0BXT9|RF1_RICRO Peptide chain release factor 1 OS=Rickettsia rickettsii (strain
Iowa) GN=prfA PE=3 SV=1
Length = 355
Score = 267 bits (682), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 191/274 (69%), Gaps = 13/274 (4%)
Query: 57 LSNDLIKIMEQRVLAIERRSACLENLVNQPEAS--PAEYSKANKELRKLRDSMHLISELR 114
S++L KI+++ ENL N+ + E+ KA+KE +L D + I E
Sbjct: 3 FSDNLAKILDK-----------YENLGNKLSSGIMGDEFVKASKEYAELEDVVAKIKEYN 51
Query: 115 TKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCI 174
+ E++ + E D L+M +E+ + +L+ + +LLPKDDAD + I
Sbjct: 52 KAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAI 111
Query: 175 LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 234
+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I G V+
Sbjct: 112 IEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVF 171
Query: 235 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 294
KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR+ G+G
Sbjct: 172 SKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAG 231
Query: 295 GQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
GQH NTT+SAVR+THIPTG+T+++QDE+SQH K
Sbjct: 232 GQHVNTTDSAVRITHIPTGITVALQDEKSQHKNK 265
>sp|C4K0C9|RF1_RICPU Peptide chain release factor 1 OS=Rickettsia peacockii (strain
Rustic) GN=prfA PE=3 SV=1
Length = 355
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 190/274 (69%), Gaps = 13/274 (4%)
Query: 57 LSNDLIKIMEQRVLAIERRSACLENLVNQPEAS--PAEYSKANKELRKLRDSMHLISELR 114
S++L KI+++ ENL N + E+ KA+KE +L D + I E
Sbjct: 3 FSDNLAKILDK-----------YENLGNTLSSGIMGDEFVKASKEYAELEDVVAKIKEYN 51
Query: 115 TKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCI 174
+ E++ + E D L+M +E+ + +L+ + +LLPKDDAD + I
Sbjct: 52 KAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAI 111
Query: 175 LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 234
+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I G V+
Sbjct: 112 IEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVF 171
Query: 235 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 294
KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR+ G+G
Sbjct: 172 SKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAG 231
Query: 295 GQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
GQH NTT+SAVR+THIPTG+T+++QDE+SQH K
Sbjct: 232 GQHVNTTDSAVRITHIPTGITVALQDEKSQHKNK 265
>sp|A8F1S1|RF1_RICM5 Peptide chain release factor 1 OS=Rickettsia massiliae (strain
Mtu5) GN=prfA PE=3 SV=1
Length = 361
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 191/274 (69%), Gaps = 13/274 (4%)
Query: 57 LSNDLIKIMEQRVLAIERRSACLENLVNQPEAS--PAEYSKANKELRKLRDSMHLISELR 114
S++L KI+++ ENL N+ + E+ KA+KE +L D + I E
Sbjct: 3 FSDNLAKILDK-----------YENLGNKLSSGIMGDEFVKASKEYAELEDVVAKIKEYN 51
Query: 115 TKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCI 174
+ E++ + E D L+M +E+ + +L+ + +LLPKDDAD + I
Sbjct: 52 KAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAI 111
Query: 175 LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 234
+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I G V+
Sbjct: 112 IEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVF 171
Query: 235 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 294
KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR+ G+G
Sbjct: 172 SKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIQIEDKDLRIDTYRASGAG 231
Query: 295 GQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
GQH NTT+SAVR+THIPTG+T+++QDE+SQH K
Sbjct: 232 GQHVNTTDSAVRITHIPTGITVALQDEKSQHKNK 265
>sp|Q92HK9|RF1_RICCN Peptide chain release factor 1 OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=prfA PE=3 SV=1
Length = 355
Score = 266 bits (679), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 190/274 (69%), Gaps = 13/274 (4%)
Query: 57 LSNDLIKIMEQRVLAIERRSACLENLVNQPEAS--PAEYSKANKELRKLRDSMHLISELR 114
S++L KI+++ ENL N+ + E+ KA+KE +L D + I E
Sbjct: 3 FSDNLAKILDK-----------YENLGNKLSSGIMGDEFVKASKEYAELEDVVAKIKEYN 51
Query: 115 TKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCI 174
+ E++ + E D L+M +E+ + +L+ + +LLPKDDAD + I
Sbjct: 52 KAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAI 111
Query: 175 LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 234
+EVRAG+GGEEA+LFA +F MY+RY++ KGW FE++ ++++ + GYKEASA+I G V+
Sbjct: 112 IEVRAGSGGEEAALFAAVLFNMYQRYAELKGWHFEILAISDTGIGGYKEASASIKGKDVF 171
Query: 235 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 294
KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR+ G+G
Sbjct: 172 SKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAG 231
Query: 295 GQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
GQH NTT+SAVR+THIPTG+T+++QDE+SQH K
Sbjct: 232 GQHVNTTDSAVRITHIPTGITVALQDEKSQHKNK 265
>sp|Q4ULG0|RF1_RICFE Peptide chain release factor 1 OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=prfA PE=3 SV=1
Length = 355
Score = 266 bits (679), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 176/237 (74%)
Query: 92 EYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE 151
E+ KA+KE +L D + I E + E++ + E D L+M +E+ +
Sbjct: 29 EFVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSL 88
Query: 152 KRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV 211
+L+ + +LLPKDDAD + I+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++
Sbjct: 89 PKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEIL 148
Query: 212 GVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA 271
++++ + GYKEASA+I G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A
Sbjct: 149 AISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEA 208
Query: 272 DEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
+EVD+++ ++DLRIDTYR+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH K
Sbjct: 209 EEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNK 265
>sp|A8GNQ4|RF1_RICAH Peptide chain release factor 1 OS=Rickettsia akari (strain
Hartford) GN=prfA PE=3 SV=1
Length = 355
Score = 265 bits (677), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 176/237 (74%)
Query: 92 EYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE 151
E+ KA+KE +L D + I E + E++ + E D L M +E+ + +
Sbjct: 29 EFVKASKEYAELEDVVVKIKEYNKAKSELEEANNFKLELGFDNATLAMIEDEIHILENSL 88
Query: 152 KRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV 211
+L+ + +LLPKDDAD + I+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++
Sbjct: 89 PKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEIL 148
Query: 212 GVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA 271
++++ + GYKEASA+I G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A
Sbjct: 149 AISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEA 208
Query: 272 DEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
+EVD+++ ++DLRIDTYR+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH K
Sbjct: 209 EEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNK 265
>sp|Q1RJT5|RF1_RICBR Peptide chain release factor 1 OS=Rickettsia bellii (strain
RML369-C) GN=prfA PE=3 SV=1
Length = 357
Score = 264 bits (675), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 172/237 (72%)
Query: 92 EYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE 151
E+ KA+KE L D + I E + E++ + E S DK L+M EE+ D
Sbjct: 32 EFVKASKEYADLEDIVQKIKEYNKAKAELEEANNFKQEPSLDKATLEMIEEEIRNLEDSL 91
Query: 152 KRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV 211
L+ + +LLPKD+AD + I+E+RAGTGGEEA+LFA +F MY+RY++ KGW+FE++
Sbjct: 92 PTLERSVKIALLPKDEADSKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEIL 151
Query: 212 GVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA 271
+ E+ + GYKE SA+I G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+
Sbjct: 152 SIDETGIGGYKEVSASIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEV 211
Query: 272 DEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
++VD++L +DLRIDTYR+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH K
Sbjct: 212 EDVDIKLEEKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNK 268
>sp|A8GXI1|RF1_RICB8 Peptide chain release factor 1 OS=Rickettsia bellii (strain OSU
85-389) GN=prfA PE=3 SV=1
Length = 357
Score = 264 bits (675), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 172/237 (72%)
Query: 92 EYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE 151
E+ KA+KE L D + I E + E++ + E S DK L+M EE+ D
Sbjct: 32 EFVKASKEYADLEDIVQKIKEYNKAKAELEEANNFKQEPSLDKATLEMIEEEIRNLEDSL 91
Query: 152 KRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV 211
L+ + +LLPKD+AD + I+E+RAGTGGEEA+LFA +F MY+RY++ KGW+FE++
Sbjct: 92 PTLERSVKIALLPKDEADSKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEIL 151
Query: 212 GVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA 271
+ E+ + GYKE SA+I G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+
Sbjct: 152 SIDETGIGGYKEVSASIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEV 211
Query: 272 DEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
++VD++L +DLRIDTYR+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH K
Sbjct: 212 EDVDIKLEEKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNK 268
>sp|Q68WK7|RF1_RICTY Peptide chain release factor 1 OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=prfA PE=3 SV=1
Length = 355
Score = 263 bits (672), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 176/237 (74%)
Query: 92 EYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE 151
E+ KA+KE +L D + I E + E++ +L E + D L+M E+ + +
Sbjct: 29 EFVKASKEYAELEDIVVKIKEYNKVKSELEEANNLRLEVALDNATLEMINNEIYILENLL 88
Query: 152 KRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV 211
+L+ + SLLPKD+AD + I+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++
Sbjct: 89 PKLERAVRISLLPKDEADSKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAEFKGWRFEIL 148
Query: 212 GVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA 271
++ + + GYKEASA+I G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A
Sbjct: 149 AISNTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEA 208
Query: 272 DEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
+ VD+++ ++DLRIDTYRS G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH K
Sbjct: 209 EGVDIKIEDKDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNK 265
>sp|Q2RWE1|RF1_RHORT Peptide chain release factor 1 OS=Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255) GN=prfA PE=3 SV=1
Length = 354
Score = 260 bits (665), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 126/236 (53%), Positives = 175/236 (74%), Gaps = 4/236 (1%)
Query: 93 YSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEK 152
+ + ++EL L + I L + E+ G ++L+ +D DM D+A EE+ E
Sbjct: 31 FVRMSRELADLAPVVEAIGRLDDAKAELAGARALL----DDPDMRDLAREEVLRLEAEIP 86
Query: 153 RLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVG 212
L+ + LLP+D+AD+R ILEVRAGTGG+EA+LFA D+ +MYERY+Q++GW+FEV+
Sbjct: 87 ALEHGVKLLLLPRDEADDRGVILEVRAGTGGDEAALFAGDLLRMYERYAQERGWRFEVME 146
Query: 213 VTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQAD 272
+++D+ G KEASAAISG GV+ +LKFESG+HRVQRVP+TE GR+HTSA +VA+LP+A+
Sbjct: 147 ASDTDIGGIKEASAAISGRGVFARLKFESGVHRVQRVPVTEGGGRIHTSAATVAVLPEAE 206
Query: 273 EVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
EVDV + +DLRIDTYRS G+GGQH NTT+SAVR+TH+P+G+ QDE+SQH K
Sbjct: 207 EVDVEIEEKDLRIDTYRSQGAGGQHVNTTDSAVRITHLPSGVVAQCQDEKSQHKNK 262
>sp|Q9ZD21|RF1_RICPR Peptide chain release factor 1 OS=Rickettsia prowazekii (strain
Madrid E) GN=prfA PE=3 SV=1
Length = 355
Score = 258 bits (660), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 175/237 (73%)
Query: 92 EYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE 151
E+ KA+KE +L D + I + + E++ + E + D L+M E+ +
Sbjct: 29 EFVKASKEYAELEDVVVKIKQYNKAKSELEEANNFRLEMALDNATLEMIDNEIHTLENLL 88
Query: 152 KRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV 211
+L+ + SLLPKD+AD + I+EVRAG+GGEEA+LFA +F MY+RYS+ KGW+FE++
Sbjct: 89 PKLERAVRISLLPKDEADSKSAIIEVRAGSGGEEAALFAAVLFNMYQRYSEFKGWRFEIL 148
Query: 212 GVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA 271
++++ + GYKEASA+I G V+ KLKFESG+HRVQR+P TE GR+HTSA +VA+LP+A
Sbjct: 149 AISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRIPETESQGRIHTSAATVAVLPEA 208
Query: 272 DEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
+ +D+++ ++DLRIDTYR+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH K
Sbjct: 209 EGIDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNK 265
>sp|A1URS5|RF1_BARBK Peptide chain release factor 1 OS=Bartonella bacilliformis (strain
ATCC 35685 / KC583) GN=prfA PE=3 SV=1
Length = 359
Score = 258 bits (658), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/266 (49%), Positives = 184/266 (69%), Gaps = 4/266 (1%)
Query: 61 LIKIMEQRVLAIERRSACLENLVNQ-PEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
++ + + R+ IE+R +E+ + Q P A Y K E +L+ + I L KE
Sbjct: 1 MVSLSQDRMKQIEKRFEIIESQMAQNPNAET--YVKLASEYAELQQIVTPIRTLNALYKE 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRA 179
+ L+++ D DM +A EEL L + ++L+ + LLPKD ADE+ I+E+RA
Sbjct: 59 VTELEAMANTTQIDADMYALAQEELVLLRQKIEQLEQEIQILLLPKDIADEKSAIIEIRA 118
Query: 180 GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKF 239
GTGG EA+LFA D+F+MYERY+ WK EVV +++S++ GYKE A ISG GV+ KLKF
Sbjct: 119 GTGGSEAALFAGDLFRMYERYANAHKWKVEVVSLSDSEVGGYKEIIATISGKGVFSKLKF 178
Query: 240 ESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHAN 299
ESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R+ G+GGQH N
Sbjct: 179 ESGVHRVQRVPETETSGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHVN 238
Query: 300 TTNSAVRVTHIPTGMTISIQDERSQH 325
TT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 239 TTDSAVRITHIPTGIMV-VQAEKSQH 263
>sp|A8EYR1|RF1_RICCK Peptide chain release factor 1 OS=Rickettsia canadensis (strain
McKiel) GN=prfA PE=3 SV=1
Length = 355
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 172/237 (72%)
Query: 92 EYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE 151
E+ KA+KE +L + + I E + E++ + E D L+M +E+ +
Sbjct: 29 EFVKASKEYAELEEVVEKIKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSL 88
Query: 152 KRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV 211
+L+ + +LLPKD+AD + I+EVRAG+GGEEA+LFA +F MY+RY++ KGW FE++
Sbjct: 89 PKLERAVKIALLPKDEADSKSAIIEVRAGSGGEEAALFAAILFNMYQRYAELKGWHFEIL 148
Query: 212 GVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA 271
+ ++ + GYKEASA+I G V+ KLK ESG+HRVQR+P TE GR+HTSA +VA+LP+
Sbjct: 149 AIVDTGIGGYKEASASIKGKDVFSKLKCESGVHRVQRIPETESHGRIHTSAATVAVLPEV 208
Query: 272 DEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
++VD++L ++DLRIDTYRS G+GGQH NTTNSAVR+THIPTG+T+++QDE+SQH K
Sbjct: 209 EDVDIKLEDKDLRIDTYRSSGAGGQHVNTTNSAVRITHIPTGITVALQDEKSQHKNK 265
>sp|B9JT13|RF1_AGRVS Peptide chain release factor 1 OS=Agrobacterium vitis (strain S4 /
ATCC BAA-846) GN=prfA PE=3 SV=1
Length = 359
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/259 (51%), Positives = 181/259 (69%), Gaps = 12/259 (4%)
Query: 72 IERRSACLENLVNQPEASPAE--YSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYE 129
+ERR +E ++ A PA Y K E +L+ + I EL +KE+ LK+L+ +
Sbjct: 12 LERRFGEIEARMS---AGPAADVYVKLASEYSELQPVVKAIRELGLAEKEVADLKALLAD 68
Query: 130 CSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILEVRAGTGGEEA 186
S D++M D+A EL D E RL+ L + LLPKD ADE+ ILE+RAGTGG EA
Sbjct: 69 KSTDREMRDLAEMELP---DVEARLEGLEKEIQIQLLPKDAADEKSAILEIRAGTGGSEA 125
Query: 187 SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 246
+LFA D+F+MYER++ KGWK EV+ +E D G+KE A ++G GV+ KLKFESG+HRV
Sbjct: 126 ALFAGDLFRMYERFAAGKGWKVEVLSSSEGDAGGFKEIIATVTGRGVFSKLKFESGVHRV 185
Query: 247 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 306
QRVP TE GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT RS G+GGQH NTT+SAVR
Sbjct: 186 QRVPDTETQGRIHTSAATVAVLPEAEEIDIEVRAEDIRIDTMRSSGAGGQHVNTTDSAVR 245
Query: 307 VTHIPTGMTISIQDERSQH 325
+TH+PTG+ ++ E+SQH
Sbjct: 246 ITHLPTGLVVT-SSEKSQH 263
>sp|Q2GBN7|RF1_NOVAD Peptide chain release factor 1 OS=Novosphingobium aromaticivorans
(strain DSM 12444) GN=prfA PE=3 SV=1
Length = 354
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/264 (46%), Positives = 180/264 (68%), Gaps = 5/264 (1%)
Query: 62 IKIMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEID 121
+ + + R+ I R A LE + A++ A+++ +L + E+R + E+
Sbjct: 1 MSVSDARLAQIAARFAELEARLASGTLEGADFIAASRDYAELEPVARVAEEVREMRGELV 60
Query: 122 GLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 181
L +L +D DM ++A EEL E + L ++LP+D AD R +LE+RAGT
Sbjct: 61 SLAAL-----DDPDMRELADEELARIRAELPEAEHRLAVAMLPRDSADARPAMLEIRAGT 115
Query: 182 GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 241
GG+EA+LFA D+F+MYERY+ ++GW+ E + V +DL GYKE A ++G GV+ KLKFES
Sbjct: 116 GGDEAALFAADLFRMYERYAAEQGWRVETISVNANDLGGYKEVVANVAGQGVFAKLKFES 175
Query: 242 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTT 301
G+HRVQRVP+TE GR+HTSA +VA+LP+ DEVDV + ++DL+ID YR+ G+GGQH NTT
Sbjct: 176 GVHRVQRVPVTESGGRIHTSAATVAVLPEPDEVDVAIEDKDLKIDIYRASGAGGQHVNTT 235
Query: 302 NSAVRVTHIPTGMTISIQDERSQH 325
+SAVR+TH+P+G+ ++ QDERSQH
Sbjct: 236 DSAVRITHLPSGLVVTCQDERSQH 259
>sp|B8EI32|RF1_METSB Peptide chain release factor 1 OS=Methylocella silvestris (strain
BL2 / DSM 15510 / NCIMB 13906) GN=prfA PE=3 SV=1
Length = 360
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 169/239 (70%), Gaps = 6/239 (2%)
Query: 90 PAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAID 149
PA Y + ++E L I + R++ +E++GL +++ + + D +M +A EEL D
Sbjct: 27 PALYVQLSREFAGLEQVAAAIRDYRSQMQEVEGLAAMLADPTTDSEMRGLAEEELR---D 83
Query: 150 EEKRLQSL---LLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGW 206
++RL++L L +LLPKD ADER ILEVRAGTGG+EA+LFA D+F+MY+RY++ KGW
Sbjct: 84 AKERLEALEHQLKIALLPKDAADERSAILEVRAGTGGDEAALFAGDLFRMYQRYAESKGW 143
Query: 207 KFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVA 266
E++ E G+KE A I+G GV+ KLKFESG HRVQRVP TE GR+HTSA +VA
Sbjct: 144 SVEIISANEGAAGGFKEIIAEIAGRGVFAKLKFESGAHRVQRVPDTETQGRIHTSAATVA 203
Query: 267 ILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQH 325
+LP+A EVDV + DL+IDT R+ G+GGQH N T SA+R+THIPTG + +QDERSQH
Sbjct: 204 VLPEAQEVDVEINEADLKIDTMRAQGAGGQHVNKTESAIRITHIPTGTIVFVQDERSQH 262
>sp|A7HTY3|RF1_PARL1 Peptide chain release factor 1 OS=Parvibaculum lavamentivorans
(strain DS-1 / DSM 13023 / NCIMB 13966) GN=prfA PE=3
SV=1
Length = 355
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 153/195 (78%)
Query: 134 KDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDV 193
+DM +MA EE+ +E RL+ + LLPKD AD+R+ ILEVRAGTGG+EA+LFA D+
Sbjct: 67 RDMAEMAKEEIARLNEELPRLEHEVQLMLLPKDAADDRNVILEVRAGTGGDEAALFAGDL 126
Query: 194 FKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTE 253
F+MYERY+ +GWK E++ +E ++ GYKE A ISG GVY KLKFESG+HRVQRVP+TE
Sbjct: 127 FRMYERYASNQGWKVELIAASEGEMGGYKEIIAGISGPGVYAKLKFESGVHRVQRVPVTE 186
Query: 254 KSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTG 313
GR+HTSA +VA+LP+A+EVDV + ++DLRID YR+ G+GGQH N T SAVR+TH+PTG
Sbjct: 187 GGGRIHTSAATVAVLPEAEEVDVEIEDKDLRIDVYRASGAGGQHVNKTESAVRITHLPTG 246
Query: 314 MTISIQDERSQHMVK 328
+ ++ QDE+SQH K
Sbjct: 247 IVVAQQDEKSQHKNK 261
>sp|A6WXQ3|RF1_OCHA4 Peptide chain release factor 1 OS=Ochrobactrum anthropi (strain
ATCC 49188 / DSM 6882 / NCTC 12168) GN=prfA PE=3 SV=1
Length = 357
Score = 256 bits (653), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/269 (49%), Positives = 189/269 (70%), Gaps = 10/269 (3%)
Query: 61 LIKIMEQRVLAIERRSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
+I + + R+ + +R + +E+ + N P++ Y K E +L++ + I EL +KE
Sbjct: 1 MIALPQDRMDQLLKRFSMIESQMANNPDSET--YVKLASEYSELQEVVGKIRELTDSRKE 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILE 176
L ++ + S D +M +A EEL EKR++ L + LLPKD ADE++ ILE
Sbjct: 59 AVDLAAMRDDASTDAEMRALALEELPGV---EKRIEGLEQEVQILLLPKDAADEKNAILE 115
Query: 177 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 236
+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A +SG GV+ K
Sbjct: 116 IRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSK 175
Query: 237 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 296
LKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RIDT R+ G+GGQ
Sbjct: 176 LKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQ 235
Query: 297 HANTTNSAVRVTHIPTGMTISIQDERSQH 325
H NTT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 236 HVNTTDSAVRITHIPTGIMV-VQAEKSQH 263
>sp|Q8YJ95|RF1_BRUME Peptide chain release factor 1 OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=prfA PE=3 SV=2
Length = 359
Score = 255 bits (651), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 188/269 (69%), Gaps = 10/269 (3%)
Query: 61 LIKIMEQRVLAIERRSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
+I + + R+ + +R + +E+ + N P++ Y K E +L+D + I EL + E
Sbjct: 1 MIALPQDRMDQLLKRFSMIESQMANNPDSDT--YVKLASEYSELQDVVGKIRELSDARME 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILE 176
L ++ + S D +M +A EEL + EKR+ L + LLPKD AD+++ ILE
Sbjct: 59 ASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKDAADDKNAILE 115
Query: 177 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 236
+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A +SG GV+ K
Sbjct: 116 IRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSK 175
Query: 237 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 296
LKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RIDT R+ G+GGQ
Sbjct: 176 LKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQ 235
Query: 297 HANTTNSAVRVTHIPTGMTISIQDERSQH 325
H NTT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 236 HVNTTDSAVRITHIPTGIMV-VQAEKSQH 263
>sp|C0RFB5|RF1_BRUMB Peptide chain release factor 1 OS=Brucella melitensis biotype 2
(strain ATCC 23457) GN=prfA PE=3 SV=1
Length = 359
Score = 255 bits (651), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 188/269 (69%), Gaps = 10/269 (3%)
Query: 61 LIKIMEQRVLAIERRSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
+I + + R+ + +R + +E+ + N P++ Y K E +L+D + I EL + E
Sbjct: 1 MIALPQDRMDQLLKRFSMIESQMANNPDSDT--YVKLASEYSELQDVVGKIRELSDARME 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILE 176
L ++ + S D +M +A EEL + EKR+ L + LLPKD AD+++ ILE
Sbjct: 59 ASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKDAADDKNAILE 115
Query: 177 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 236
+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A +SG GV+ K
Sbjct: 116 IRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSK 175
Query: 237 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 296
LKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RIDT R+ G+GGQ
Sbjct: 176 LKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQ 235
Query: 297 HANTTNSAVRVTHIPTGMTISIQDERSQH 325
H NTT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 236 HVNTTDSAVRITHIPTGIMV-VQAEKSQH 263
>sp|Q57B22|RF1_BRUAB Peptide chain release factor 1 OS=Brucella abortus biovar 1 (strain
9-941) GN=prfA PE=3 SV=1
Length = 359
Score = 255 bits (651), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 188/269 (69%), Gaps = 10/269 (3%)
Query: 61 LIKIMEQRVLAIERRSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
+I + + R+ + +R + +E+ + N P++ Y K E +L+D + I EL + E
Sbjct: 1 MIALPQDRMDQLLKRFSMIESQMANNPDSDT--YVKLASEYSELQDVVGKIRELSDARME 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILE 176
L ++ + S D +M +A EEL + EKR+ L + LLPKD AD+++ ILE
Sbjct: 59 ASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKDAADDKNAILE 115
Query: 177 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 236
+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A +SG GV+ K
Sbjct: 116 IRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSK 175
Query: 237 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 296
LKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RIDT R+ G+GGQ
Sbjct: 176 LKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQ 235
Query: 297 HANTTNSAVRVTHIPTGMTISIQDERSQH 325
H NTT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 236 HVNTTDSAVRITHIPTGIMV-VQAEKSQH 263
>sp|Q2YLN8|RF1_BRUA2 Peptide chain release factor 1 OS=Brucella abortus (strain 2308)
GN=prfA PE=3 SV=1
Length = 359
Score = 255 bits (651), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 188/269 (69%), Gaps = 10/269 (3%)
Query: 61 LIKIMEQRVLAIERRSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
+I + + R+ + +R + +E+ + N P++ Y K E +L+D + I EL + E
Sbjct: 1 MIALPQDRMDQLLKRFSMIESQMANNPDSDT--YVKLASEYSELQDVVGKIRELSDARME 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILE 176
L ++ + S D +M +A EEL + EKR+ L + LLPKD AD+++ ILE
Sbjct: 59 ASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKDAADDKNAILE 115
Query: 177 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 236
+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A +SG GV+ K
Sbjct: 116 IRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSK 175
Query: 237 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 296
LKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RIDT R+ G+GGQ
Sbjct: 176 LKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQ 235
Query: 297 HANTTNSAVRVTHIPTGMTISIQDERSQH 325
H NTT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 236 HVNTTDSAVRITHIPTGIMV-VQAEKSQH 263
>sp|B2S825|RF1_BRUA1 Peptide chain release factor 1 OS=Brucella abortus (strain S19)
GN=prfA PE=3 SV=1
Length = 359
Score = 255 bits (651), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 188/269 (69%), Gaps = 10/269 (3%)
Query: 61 LIKIMEQRVLAIERRSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
+I + + R+ + +R + +E+ + N P++ Y K E +L+D + I EL + E
Sbjct: 1 MIALPQDRMDQLLKRFSMIESQMANNPDSDT--YVKLASEYSELQDVVGKIRELSDARME 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILE 176
L ++ + S D +M +A EEL + EKR+ L + LLPKD AD+++ ILE
Sbjct: 59 ASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKDAADDKNAILE 115
Query: 177 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 236
+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A +SG GV+ K
Sbjct: 116 IRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSK 175
Query: 237 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 296
LKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RIDT R+ G+GGQ
Sbjct: 176 LKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQ 235
Query: 297 HANTTNSAVRVTHIPTGMTISIQDERSQH 325
H NTT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 236 HVNTTDSAVRITHIPTGIMV-VQAEKSQH 263
>sp|Q8FYK3|RF1_BRUSU Peptide chain release factor 1 OS=Brucella suis biovar 1 (strain
1330) GN=prfA PE=3 SV=1
Length = 359
Score = 254 bits (650), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 188/269 (69%), Gaps = 10/269 (3%)
Query: 61 LIKIMEQRVLAIERRSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
+I + + R+ + +R + +E+ + N P++ Y K E +L+D + I EL + E
Sbjct: 1 MIALPQDRMDQLLKRFSMIESQMANNPDSDT--YVKLASEYSELQDVVGKIRELSDARME 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILE 176
L ++ + S D +M +A EEL + EKR+ L + LLPKD AD+++ ILE
Sbjct: 59 ASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKDAADDKNAILE 115
Query: 177 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 236
+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A +SG GV+ K
Sbjct: 116 IRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSK 175
Query: 237 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 296
LKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RIDT R+ G+GGQ
Sbjct: 176 LKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQ 235
Query: 297 HANTTNSAVRVTHIPTGMTISIQDERSQH 325
H NTT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 236 HVNTTDSAVRITHIPTGIMV-VQAEKSQH 263
>sp|A9M8K5|RF1_BRUC2 Peptide chain release factor 1 OS=Brucella canis (strain ATCC 23365
/ NCTC 10854) GN=prfA PE=3 SV=1
Length = 359
Score = 254 bits (650), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 188/269 (69%), Gaps = 10/269 (3%)
Query: 61 LIKIMEQRVLAIERRSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
+I + + R+ + +R + +E+ + N P++ Y K E +L+D + I EL + E
Sbjct: 1 MIALPQDRMDQLLKRFSMIESQMANNPDSDT--YVKLASEYSELQDVVGKIRELSDARME 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILE 176
L ++ + S D +M +A EEL + EKR+ L + LLPKD AD+++ ILE
Sbjct: 59 ASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKDAADDKNAILE 115
Query: 177 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 236
+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A +SG GV+ K
Sbjct: 116 IRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSK 175
Query: 237 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 296
LKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RIDT R+ G+GGQ
Sbjct: 176 LKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQ 235
Query: 297 HANTTNSAVRVTHIPTGMTISIQDERSQH 325
H NTT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 236 HVNTTDSAVRITHIPTGIMV-VQAEKSQH 263
>sp|Q98G93|RF1_RHILO Peptide chain release factor 1 OS=Rhizobium loti (strain
MAFF303099) GN=prfA PE=3 SV=1
Length = 359
Score = 254 bits (648), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 126/252 (50%), Positives = 180/252 (71%), Gaps = 9/252 (3%)
Query: 79 LENLVNQPEASPAE--YSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDM 136
E L Q A PA Y K E +L+D + + +LR+ + E L++++ + D +M
Sbjct: 16 FEMLEAQMSAGPAPDAYVKMASEYAELQDMVAKVRQLRSAEHEQADLEAMLADKGTDAEM 75
Query: 137 LDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDV 193
+A +L D E+R+++L + LLPKD AD+++ ILE+RAGTGG+EA+LFA D+
Sbjct: 76 RALAEADLP---DVEERIEALQKDIQILLLPKDAADDKNAILEIRAGTGGDEAALFAGDL 132
Query: 194 FKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTE 253
F+MYERY+ ++GW+FE V ++ D G+KE A +SG GV+ LKFESG+HRVQRVP TE
Sbjct: 133 FRMYERYAAERGWRFETVSASDGDAGGFKEIIATVSGKGVFAHLKFESGVHRVQRVPATE 192
Query: 254 KSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTG 313
SGR+HTSA +VA+LP+A+EVD+ +R ED+RIDT R+ GSGGQH NTT+SAVR+TH+PTG
Sbjct: 193 ASGRIHTSAATVAVLPEAEEVDIEIRAEDIRIDTMRASGSGGQHVNTTDSAVRITHLPTG 252
Query: 314 MTISIQDERSQH 325
+ + +Q E+SQH
Sbjct: 253 IMV-VQAEKSQH 263
>sp|B3CL87|RF1_WOLPP Peptide chain release factor 1 OS=Wolbachia pipientis subsp. Culex
pipiens (strain wPip) GN=prfA PE=3 SV=1
Length = 363
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/252 (49%), Positives = 180/252 (71%), Gaps = 7/252 (2%)
Query: 81 NLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMA 140
NL N S E+ +KE +LR + +I E ++EI L+ ++ + + D D+ ++A
Sbjct: 20 NLENPTNLSQKEFVSFSKEYSELRPIIEIIDEYNILKEEISDLEEIMKDENSDGDIKELA 79
Query: 141 TEELCLAIDEEK----RLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKM 196
EEL ++++K ++++ L +LLPKD+ D R+ ILE+RAGTGGEEA+LFA +F+M
Sbjct: 80 KEEL---LEKQKIVLPKVKAKLKLALLPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRM 136
Query: 197 YERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSG 256
Y++Y++++ WKFE + ++ + + GYKEASA I+G V+ +LKFESG+HRVQRVP TE SG
Sbjct: 137 YQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFESGVHRVQRVPETESSG 196
Query: 257 RVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTI 316
R+HTSA +VAILP+ +EVD + +DLRID YRS G GGQ NTT+SAVRVTH+PTG+ +
Sbjct: 197 RLHTSAATVAILPEVEEVDFEIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVV 256
Query: 317 SIQDERSQHMVK 328
QDE+SQH K
Sbjct: 257 IQQDEKSQHKNK 268
>sp|B0CIC3|RF1_BRUSI Peptide chain release factor 1 OS=Brucella suis (strain ATCC 23445
/ NCTC 10510) GN=prfA PE=3 SV=1
Length = 359
Score = 253 bits (646), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/269 (48%), Positives = 187/269 (69%), Gaps = 10/269 (3%)
Query: 61 LIKIMEQRVLAIERRSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
+I + + R+ + +R + +E+ + N P++ Y K E +L+D + I EL + E
Sbjct: 1 MIALPQDRMDQLLKRFSMIESQMANNPDSDT--YVKLASEYSELQDVVGKIRELSDARME 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILE 176
L ++ + S D +M +A EEL + EKR+ L + LLPKD AD+++ ILE
Sbjct: 59 ASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKDAADDKNAILE 115
Query: 177 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 236
+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE +SG GV+ K
Sbjct: 116 IRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIITTVSGKGVFSK 175
Query: 237 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 296
LKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RIDT R+ G+GGQ
Sbjct: 176 LKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRIDTMRASGAGGQ 235
Query: 297 HANTTNSAVRVTHIPTGMTISIQDERSQH 325
H NTT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 236 HVNTTDSAVRITHIPTGIMV-VQAEKSQH 263
>sp|Q73IC2|RF1_WOLPM Peptide chain release factor 1 OS=Wolbachia pipientis wMel GN=prfA
PE=3 SV=1
Length = 359
Score = 253 bits (645), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/271 (46%), Positives = 187/271 (69%), Gaps = 12/271 (4%)
Query: 65 MEQRVLAIERRSACLE-NLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGL 123
ME + ++++ +E NL N S E+ +KE +LR + +I E T ++EI L
Sbjct: 3 MENNLQDLKKKFNDIERNLENPTNLSQKEFITLSKEYSELRPIIKIIDEYNTLKEEISDL 62
Query: 124 KSLIYECSEDKDMLDMATEELCLAIDEEK------RLQSLLLKSLLPKDDADERDCILEV 177
+ ++ + + + D+ ++A EE EK ++++ L +LLPKD+ D R+ ILE+
Sbjct: 63 EEIMKDENSEGDIKELAKEEFF-----EKHKVLLPKIKAKLKLALLPKDEDDSRNAILEI 117
Query: 178 RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 237
RAGTGGEEA+LFA +F+MY++Y++++ WKFE + ++ + + GYKEASA I+G V+ +L
Sbjct: 118 RAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARL 177
Query: 238 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 297
KFESG+HRVQRVP TE SGR+HTSA +VAILP+ +EVD ++ +DLRID YRS G GGQ
Sbjct: 178 KFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFKIEEKDLRIDVYRSSGPGGQS 237
Query: 298 ANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
NTT+SAVRVTH+PTG+ + QDE+SQH K
Sbjct: 238 VNTTDSAVRVTHLPTGIVVIQQDEKSQHKNK 268
>sp|A5CYC3|RF1_PELTS Peptide chain release factor 1 OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=prfA PE=3 SV=1
Length = 349
Score = 253 bits (645), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/270 (47%), Positives = 187/270 (69%), Gaps = 9/270 (3%)
Query: 65 MEQRVLAIERRSACLENLVNQPE-----ASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
M +++ +IE++ LENL+ PE A EY KA+ EL D + + + + KE
Sbjct: 1 MIEKLDSIEKKYEELENLIGNPEIIADIARWQEYVKAHAELA---DIVAVYRDYKKVVKE 57
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRA 179
I +L+ E D+D+ +MA EL +++ L++ L LLPKD DE++ ILE+RA
Sbjct: 58 IQDTIALMKE-EPDEDLREMAQAELDELTEKKDNLENRLKMLLLPKDPNDEKNVILEIRA 116
Query: 180 GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKF 239
GTGGEEA+LFA D+F+MY RY++++GW+ E++ +D+ G+KE + I G GVY ++KF
Sbjct: 117 GTGGEEAALFAADLFRMYSRYAERQGWRTEILDANYTDIGGFKEVISLIEGKGVYSRMKF 176
Query: 240 ESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHAN 299
ESG+HRVQR+P TE GR+HTSA +VA+LP+A+EVDV++ +DLRID + S G GGQ N
Sbjct: 177 ESGVHRVQRIPTTESGGRIHTSAATVAVLPEAEEVDVQIDPDDLRIDVFCSSGHGGQSVN 236
Query: 300 TTNSAVRVTHIPTGMTISIQDERSQHMVKD 329
TT SAVR+THIPTG+ +S+QDE+SQH K+
Sbjct: 237 TTQSAVRITHIPTGIVVSMQDEKSQHKNKE 266
>sp|A5V9C3|RF1_SPHWW Peptide chain release factor 1 OS=Sphingomonas wittichii (strain
RW1 / DSM 6014 / JCM 10273) GN=prfA PE=3 SV=1
Length = 360
Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/268 (46%), Positives = 186/268 (69%), Gaps = 6/268 (2%)
Query: 64 IMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGL 123
I R+ IE R L+ L+ + + ++ + +K+ ++ E+R + E+D L
Sbjct: 4 ITSARIAQIEARRDELQALMARGDLPSDQFVQLSKDYAEIEPVAQAAGEVRRLRAELDVL 63
Query: 124 KSLIYECSEDKDMLDMA---TEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAG 180
K + + + D ++ MA EE+ + E +R +L LK LLP+D ADER +LE+RAG
Sbjct: 64 KGMAEDEAGDAELRAMAIEEAEEIRARLPEAER--ALALK-LLPRDAADERSAMLEIRAG 120
Query: 181 TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFE 240
TGG+EA+LFA D+F+MY+RY++ +GW+ E++ + +DL GYKE A+++G GV+ +LKFE
Sbjct: 121 TGGDEAALFAGDLFRMYQRYAEDRGWRVELISASAADLGGYKEVVASVTGAGVFARLKFE 180
Query: 241 SGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANT 300
SG+HRVQRVP+TE GR+HTSA +VA+LP+A+EVDV + ++DLRID YRS G GGQ NT
Sbjct: 181 SGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDVHIDDKDLRIDVYRSSGPGGQSVNT 240
Query: 301 TNSAVRVTHIPTGMTISIQDERSQHMVK 328
T+SAVR+TH+PTG+ + QDE+SQH K
Sbjct: 241 TDSAVRITHLPTGLVVIQQDEKSQHKNK 268
>sp|Q1GPK3|RF1_SPHAL Peptide chain release factor 1 OS=Sphingopyxis alaskensis (strain
DSM 13593 / LMG 18877 / RB2256) GN=prfA PE=3 SV=1
Length = 355
Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/265 (45%), Positives = 177/265 (66%), Gaps = 4/265 (1%)
Query: 61 LIKIMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEI 120
+ + +++ AI R A L+ + + +PA++ A+KE +L E+ ++E+
Sbjct: 1 MTSVSARQIDAIIERHAALQARMATGDMAPADFVAASKEFAELEPVATAAREVVRLREEL 60
Query: 121 DGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAG 180
L ++ D +M MA EE+ + L LLPKD AD R +LE+RAG
Sbjct: 61 VALNEMLA----DPEMKAMAVEEIAAVEAALPAAEHDLALQLLPKDVADSRAAMLEIRAG 116
Query: 181 TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFE 240
TGG+EA+LFA D+ +MY RY+ +GWK E++ E+++ GYKE A++SG GV+ KLKFE
Sbjct: 117 TGGDEAALFAGDLLRMYSRYADTQGWKVEIISANEAEVGGYKEVVASVSGQGVFAKLKFE 176
Query: 241 SGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANT 300
SG+HRVQRVP+TE GR+HTSA +VA+LP+A+EVDV + + DL+ID YR+ G+GGQH NT
Sbjct: 177 SGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDVAINDSDLKIDIYRASGAGGQHVNT 236
Query: 301 TNSAVRVTHIPTGMTISIQDERSQH 325
T+SA+R+THIPTG+ + QD+RSQH
Sbjct: 237 TDSAIRITHIPTGLVVIQQDQRSQH 261
>sp|Q5PAH2|RF1_ANAMM Peptide chain release factor 1 OS=Anaplasma marginale (strain St.
Maries) GN=prfA PE=3 SV=1
Length = 359
Score = 252 bits (643), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 173/248 (69%), Gaps = 1/248 (0%)
Query: 79 LENLVNQPEASPAE-YSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDML 137
L+ ++ PE+ + + A++E L M LI E +T QKEI+ L+ LI D +++
Sbjct: 17 LKQQLSDPESLGVQAFVVASREYSDLLPIMSLIEEYQTAQKEIEELEGLINSTDTDAELV 76
Query: 138 DMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMY 197
+A EEL +L+ L SLLPKD D R ILE+RAGTGGEEA+LF D+++MY
Sbjct: 77 HLAREELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGTGGEEAALFVCDLYRMY 136
Query: 198 ERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGR 257
+Y+++K WK E +G++ + + GYKEAS I G V+ +LKFESG+HRVQRVP TE SGR
Sbjct: 137 IKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFESGVHRVQRVPETESSGR 196
Query: 258 VHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTIS 317
+HTSA +VA+LP+ +EVD+++ +DLRID YRS G GGQ NTT+SAVR+THIPTG+ +
Sbjct: 197 LHTSAATVAVLPEVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVI 256
Query: 318 IQDERSQH 325
QDE+SQH
Sbjct: 257 QQDEKSQH 264
>sp|B9KIV2|RF1_ANAMF Peptide chain release factor 1 OS=Anaplasma marginale (strain
Florida) GN=prfA PE=3 SV=1
Length = 359
Score = 252 bits (643), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 173/248 (69%), Gaps = 1/248 (0%)
Query: 79 LENLVNQPEASPAE-YSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDML 137
L+ ++ PE+ + + A++E L M LI E +T QKEI+ L+ LI D +++
Sbjct: 17 LKQQLSDPESLGVQAFVVASREYSDLLPIMSLIEEYQTAQKEIEELEGLINSTDTDAELV 76
Query: 138 DMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMY 197
+A EEL +L+ L SLLPKD D R ILE+RAGTGGEEA+LF D+++MY
Sbjct: 77 HLAREELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGTGGEEAALFVCDLYRMY 136
Query: 198 ERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGR 257
+Y+++K WK E +G++ + + GYKEAS I G V+ +LKFESG+HRVQRVP TE SGR
Sbjct: 137 IKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFESGVHRVQRVPETESSGR 196
Query: 258 VHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTIS 317
+HTSA +VA+LP+ +EVD+++ +DLRID YRS G GGQ NTT+SAVR+THIPTG+ +
Sbjct: 197 LHTSAATVAVLPEVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVI 256
Query: 318 IQDERSQH 325
QDE+SQH
Sbjct: 257 QQDEKSQH 264
>sp|Q6G5T7|RF1_BARHE Peptide chain release factor 1 OS=Bartonella henselae (strain ATCC
49882 / Houston 1) GN=prfA PE=3 SV=1
Length = 359
Score = 252 bits (643), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/266 (48%), Positives = 182/266 (68%), Gaps = 4/266 (1%)
Query: 61 LIKIMEQRVLAIERRSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
++ + + R+ +E+R +E+ + P A Y K E +L+ + I L E
Sbjct: 1 MVSLPQDRMRQLEKRFEIIESQMAKNPNAEI--YVKLASEYAELQPIVSSIRALNALYGE 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRA 179
I L+++I + D +M +A EEL L + ++L+ L LLPKD ADE+ I+E+RA
Sbjct: 59 ITDLETIISDKLTDVEMRTLAQEELPLLCQKMEQLEQKLQILLLPKDVADEKSAIVEIRA 118
Query: 180 GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKF 239
GTGG EA+LFA D+F+MYERY+ + WK EVV + E ++ GYKE A ISG GV+ KLKF
Sbjct: 119 GTGGSEAALFAGDLFRMYERYAASRNWKVEVVSLNEGEVGGYKEIIATISGRGVFSKLKF 178
Query: 240 ESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHAN 299
ESG+HRVQR+P TE GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R+ G+GGQH N
Sbjct: 179 ESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHVN 238
Query: 300 TTNSAVRVTHIPTGMTISIQDERSQH 325
TT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 239 TTDSAVRITHIPTGIMV-VQAEKSQH 263
>sp|Q5GSS8|RF1_WOLTR Peptide chain release factor 1 OS=Wolbachia sp. subsp. Brugia
malayi (strain TRS) GN=prfA PE=3 SV=1
Length = 359
Score = 251 bits (642), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/261 (49%), Positives = 185/261 (70%), Gaps = 13/261 (4%)
Query: 72 IERRSACLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECS 131
IER+ LEN N S E+ +KE +LR + +I+E T +KEI L+ +I + +
Sbjct: 17 IERK---LENPTN---LSQKEFINLSKEYSELRPIIKIINEYDTLKKEILDLEEIIKDEN 70
Query: 132 EDKDMLDMATEELCLAIDEEK----RLQSLLLKSLLPKDDADERDCILEVRAGTGGEEAS 187
+ D+ ++A EE +++K ++++ L +LLPKD+ D R+ ILE+RAGTGGEEA+
Sbjct: 71 SEYDIKELAKEEF---FEKQKVLLPQVKAKLKLALLPKDEDDSRNAILEIRAGTGGEEAA 127
Query: 188 LFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQ 247
LFA +F+MY++Y++++ WKFE + ++ + + GYKEASA I+G V+ +LKFESG+HRVQ
Sbjct: 128 LFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYKEASALINGTEVFARLKFESGVHRVQ 187
Query: 248 RVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 307
RVP TE SGR+HTSA +VAILP+ +EVD ++ +DLRID YRS G GGQ NTT+SAVRV
Sbjct: 188 RVPETESSGRLHTSAATVAILPEVEEVDFKIEEKDLRIDVYRSSGPGGQSVNTTDSAVRV 247
Query: 308 THIPTGMTISIQDERSQHMVK 328
TH+PT M + QDE+SQH K
Sbjct: 248 THLPTEMVVIQQDEKSQHKNK 268
>sp|B6JA06|RF1_OLICO Peptide chain release factor 1 OS=Oligotropha carboxidovorans
(strain ATCC 49405 / DSM 1227 / OM5) GN=prfA PE=3 SV=1
Length = 358
Score = 251 bits (640), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 122/252 (48%), Positives = 173/252 (68%), Gaps = 3/252 (1%)
Query: 75 RSACLE-NLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSED 133
R A LE L+ Q A Y +A +EL +L + + R E+ L ++I + + D
Sbjct: 13 RHAALEAELLGQLNAEA--YVRATRELAELTPVVDAVKAYRAGASELSDLDAMIDDPTTD 70
Query: 134 KDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDV 193
+M MA E + + ++ L+ + +LLPKD DER+ +LEVRAGTGG+EASLFA D+
Sbjct: 71 AEMRAMAESERPVLQERQENLEQQIRIALLPKDAMDERNVVLEVRAGTGGDEASLFAGDL 130
Query: 194 FKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTE 253
F+MYER++ +GWK EV+ +E + GYKE A + G G + KLKFESG+HRVQRVP TE
Sbjct: 131 FRMYERFAALQGWKVEVISASEGTVGGYKEIVAQVQGRGAFAKLKFESGVHRVQRVPDTE 190
Query: 254 KSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTG 313
SGR+HTSA +VA+LP+A+E+D+ +++ DLRI+T R+ G+GGQH N T SA+R+THIPTG
Sbjct: 191 ASGRIHTSAATVAVLPEAEEIDIDIKDTDLRIETMRAQGAGGQHVNKTESAIRITHIPTG 250
Query: 314 MTISIQDERSQH 325
+ + +QD RSQH
Sbjct: 251 IVVMMQDSRSQH 262
>sp|Q2N5U6|RF1_ERYLH Peptide chain release factor 1 OS=Erythrobacter litoralis (strain
HTCC2594) GN=prfA PE=3 SV=1
Length = 355
Score = 249 bits (636), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 185/267 (69%), Gaps = 10/267 (3%)
Query: 62 IKIMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEID 121
+ I R+ I R A LE + E+ +A+++ +L + +E++ ++EI
Sbjct: 1 MTIPATRLDQIANRFAELEARMASGTLEGEEFVQASRDYAELEPVAKVAAEVKAMREEIG 60
Query: 122 GLKSLIYECSEDKDMLDMATEELCL---AIDEEKRLQSLLLKSLLPKDDADERDCILEVR 178
GL+ ++ D +M MA EEL A+ E++R ++ ++LPKD AD + +LE+R
Sbjct: 61 GLEEMLA----DPEMKAMAQEELAAIREALPEKERQLAI---AMLPKDSADNKPAMLEIR 113
Query: 179 AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 238
AGTGG+EA+LFA D+++MYER++ ++GWK E V + S++ G+KE A +SG GV+ KLK
Sbjct: 114 AGTGGDEAALFAGDLYRMYERFAGEQGWKVEPVSMNASEVGGFKEIVANVSGTGVFAKLK 173
Query: 239 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 298
FESG+HRVQRVP TE GR+HTSA +VA+LP+ DEVDV++ ++DL+ID YR+ G+GGQH
Sbjct: 174 FESGVHRVQRVPETESGGRIHTSAATVAVLPEPDEVDVQIDDKDLKIDIYRASGAGGQHV 233
Query: 299 NTTNSAVRVTHIPTGMTISIQDERSQH 325
NTT+SAVR+TH+PTG+ + QDERSQH
Sbjct: 234 NTTDSAVRITHLPTGIVVQQQDERSQH 260
>sp|Q8U8B8|RF1_AGRT5 Peptide chain release factor 1 OS=Agrobacterium tumefaciens (strain
C58 / ATCC 33970) GN=prfA PE=3 SV=1
Length = 360
Score = 249 bits (636), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 184/271 (67%), Gaps = 14/271 (5%)
Query: 61 LIKIMEQRVLAIERRSACLENLVNQPEAS------PAEYSKANKELRKLRDSMHLISELR 114
+ K+ +++ +ERR +E ++ A+ +EYS+ ++K+RD ISE
Sbjct: 1 MAKLPVEKMRELERRFGEIEARMSAGPAADVYVKLASEYSELEPVVKKIRDYEKAISEAA 60
Query: 115 TKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCI 174
L++L+ + + DKDM D+A EL + L+ + LLPKD ADE+ I
Sbjct: 61 D-------LEALLADKTTDKDMRDLAEMELPEVETRIRELEKDMQVLLLPKDAADEKSAI 113
Query: 175 LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 234
LE+RAGTGG EA+LFA D+F+MYER++ KGWK EV+ +E + GYKE A I+G GV+
Sbjct: 114 LEIRAGTGGSEAALFAGDLFRMYERFAATKGWKVEVLSASEGEAGGYKEIIATITGRGVF 173
Query: 235 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 294
KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+++DV +R ED+RIDT R+ G+G
Sbjct: 174 SKLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEDIDVEIRPEDIRIDTMRASGAG 233
Query: 295 GQHANTTNSAVRVTHIPTGMTISIQDERSQH 325
GQH NTT+SAVR+TH+PTG+ ++ E+SQH
Sbjct: 234 GQHVNTTDSAVRITHLPTGLIVT-SSEKSQH 263
>sp|B9MR68|RF1_CALBD Peptide chain release factor 1 OS=Caldicellulosiruptor bescii
(strain ATCC BAA-1888 / DSM 6725 / Z-1320) GN=prfA PE=3
SV=1
Length = 355
Score = 249 bits (635), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 183/269 (68%), Gaps = 7/269 (2%)
Query: 65 MEQRVLAIERRSACLENLVNQPE--ASPAEYSKANKELRKLRDSMHLISELRTKQKEIDG 122
M +++ IE + LE ++ PE + P E+ K KE L+ ++ + R ++ +D
Sbjct: 1 MIEKLQVIEEKYLELEKKISDPEIISQPQEWQKLMKEHSNLQP---IVEKFREYKRILDT 57
Query: 123 LKSL--IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAG 180
+K + + D+D + EEL A ++++ +++ L LLPKD DE++ I+E+RAG
Sbjct: 58 IKEAEELLDTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAG 117
Query: 181 TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFE 240
GGEEA+LFA ++F+MY RY+++K WK EV+ +ESDL G+KE ISG G Y +LK+E
Sbjct: 118 AGGEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYE 177
Query: 241 SGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANT 300
SG+HRVQRVP+TE GR+HTS +VA+LP+ ++V+V +R EDL IDT+R+GG+GGQH N
Sbjct: 178 SGVHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNK 237
Query: 301 TNSAVRVTHIPTGMTISIQDERSQHMVKD 329
T SAVR+ H PTG+ ++ QDERSQH +D
Sbjct: 238 TESAVRIVHKPTGIVVTCQDERSQHANRD 266
>sp|Q1QQY7|RF1_NITHX Peptide chain release factor 1 OS=Nitrobacter hamburgensis (strain
X14 / DSM 10229) GN=prfA PE=3 SV=1
Length = 361
Score = 248 bits (634), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/252 (49%), Positives = 169/252 (67%), Gaps = 3/252 (1%)
Query: 75 RSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSED 133
R A LEN L++Q A Y + +EL +L + + R + EI G+ ++I + + D
Sbjct: 15 RHAALENELLSQISAE--RYVQMTRELSELNPVVEAVKNWRAVKTEIAGIDAMIADPATD 72
Query: 134 KDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDV 193
+M MA E L + +LLPKD DER+ +LE+RAGTGG+EASLFA D+
Sbjct: 73 AEMRAMAEAERPALGARGDELAQKIRVALLPKDAMDERNVMLEIRAGTGGDEASLFAGDL 132
Query: 194 FKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTE 253
F+MYER++ +GWK E + +E + GYKE A + G G Y KLKFESG+HRVQRVP TE
Sbjct: 133 FRMYERFAGLQGWKVEAISASEGTMGGYKEIVAEVRGRGAYAKLKFESGVHRVQRVPDTE 192
Query: 254 KSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTG 313
GRVHTSA +VA+LP+A+EVDV ++ +DLRI+T R+ G+GGQH N T SA+R+THIPTG
Sbjct: 193 TQGRVHTSAATVAVLPEAEEVDVDIKTDDLRIETMRAQGAGGQHVNKTESAIRITHIPTG 252
Query: 314 MTISIQDERSQH 325
+ + +QD RSQH
Sbjct: 253 IVVMMQDSRSQH 264
>sp|A7IIM2|RF1_XANP2 Peptide chain release factor 1 OS=Xanthobacter autotrophicus
(strain ATCC BAA-1158 / Py2) GN=prfA PE=3 SV=1
Length = 360
Score = 248 bits (634), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 164/237 (69%)
Query: 92 EYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE 151
EY + +E L + + L+ +++++G L+ E + D +M +MA E+ D
Sbjct: 31 EYVRLGREFSDLSPVVEQVRALKDAERDLEGANELLAESAADPEMREMAEAEVERLQDRI 90
Query: 152 KRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV 211
+ L + + +LLPKD DER ILEVRAGTGG+EA+LFA D+++MY RY+ +KGW E++
Sbjct: 91 EALATAVRLALLPKDAMDERGIILEVRAGTGGDEAALFAGDLYRMYTRYAAEKGWSVEIL 150
Query: 212 GVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA 271
+E + GYKE AA+ G G Y +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A
Sbjct: 151 SESEGTMGGYKEIVAALHGRGAYARLKFESGVHRVQRVPATETSGRIHTSAATVAVLPEA 210
Query: 272 DEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMVK 328
++VDV + DLRID YR+ G+GGQH N T SAVR+TH+PT +++QDERSQH K
Sbjct: 211 EDVDVDINEADLRIDVYRAQGAGGQHVNKTESAVRITHLPTNTVVAVQDERSQHRNK 267
>sp|Q3SVP7|RF1_NITWN Peptide chain release factor 1 OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=prfA PE=3 SV=1
Length = 358
Score = 248 bits (633), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/234 (50%), Positives = 165/234 (70%), Gaps = 2/234 (0%)
Query: 93 YSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMA-TEELCLAIDEE 151
Y + +EL +L + + R EI G+ ++I + + D +M MA E L +
Sbjct: 30 YVQMTRELAELNPIVDAVKNWRAVTAEIAGIDAMIADPATDAEMRAMAEAERPALEARND 89
Query: 152 KRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV 211
+ +Q + + +LLPKD DER+ +LEVRAGTGG+EASLFA D+F+MYER++ +GWK EV+
Sbjct: 90 ELMQKIRV-ALLPKDAMDERNVMLEVRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVI 148
Query: 212 GVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA 271
+E + GYKE A + G G Y ++KFESG+HRVQRVP TE GRVHTSA +VA+LP+A
Sbjct: 149 SASEGTMGGYKEIVAQVQGRGAYARMKFESGVHRVQRVPDTEAQGRVHTSAATVAVLPEA 208
Query: 272 DEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQH 325
+EVDV +R +DLRI+T R+ G+GGQH N T SA+R+THIPTG+ +S+QD RSQH
Sbjct: 209 EEVDVDIRPDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGIVVSMQDSRSQH 262
>sp|Q6G0R0|RF1_BARQU Peptide chain release factor 1 OS=Bartonella quintana (strain
Toulouse) GN=prfA PE=3 SV=1
Length = 359
Score = 248 bits (632), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 180/266 (67%), Gaps = 4/266 (1%)
Query: 61 LIKIMEQRVLAIERRSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
++ + + R+ +E+R +E+ + P++ Y K E L+ + I L E
Sbjct: 1 MVSLPKDRMRQLEKRFEIIESQMAKNPDS--GTYVKLASEYADLQPIVTSIRTLNALSIE 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRA 179
I L+++I + D +M ++A EEL + ++L+ L LLPKD DE+ I+E+RA
Sbjct: 59 ITELETIISDKLTDVEMRNLAQEELPPLFQKMEKLEKELQILLLPKDITDEKSAIIEIRA 118
Query: 180 GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKF 239
GTGG EA+LF D+F+MYERY+ WK EV+ + E ++ GYKE A ISG GV+ KLKF
Sbjct: 119 GTGGSEAALFVGDLFRMYERYANAYNWKVEVISLNEGEVGGYKEIIATISGKGVFSKLKF 178
Query: 240 ESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHAN 299
ESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R+ G+GGQH N
Sbjct: 179 ESGVHRVQRVPETETSGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHVN 238
Query: 300 TTNSAVRVTHIPTGMTISIQDERSQH 325
TT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 239 TTDSAVRITHIPTGIMV-VQAEKSQH 263
>sp|Q11E04|RF1_MESSB Peptide chain release factor 1 OS=Mesorhizobium sp. (strain BNC1)
GN=prfA PE=3 SV=1
Length = 359
Score = 246 bits (629), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 179/241 (74%), Gaps = 9/241 (3%)
Query: 89 SPAEYSKANKELRKLRDSMHLISELRTKQKEIDGLKSLIYECSEDKDMLDMAT---EELC 145
SP Y K E +L++ + I LR + E++ L +++ + S D+++ ++A EE+
Sbjct: 28 SPDAYVKLASEYSELQEVANSIRALRKAEAELEDLDTMLADKSIDREIRELAEIDREEVE 87
Query: 146 LAI-DEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKK 204
+ D +++LQ LLL PKD+ADE++ ILE+RAGTGG+EA+LFA D+F+MYERY+ ++
Sbjct: 88 SRVEDMQQKLQVLLL----PKDEADEKNAILEIRAGTGGDEAALFAGDLFRMYERYASER 143
Query: 205 GWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVS 264
GW+ EVV +E + GYKE A+++G GV+ +LKFESG+HRVQRVP TE GR+HTSA +
Sbjct: 144 GWRVEVVSASEGEAGGYKEIIASVTGRGVFSRLKFESGVHRVQRVPATEAQGRIHTSAAT 203
Query: 265 VAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQ 324
VA+LP+A+++DV ++ ED+RIDT R+ G+GGQH NTT+SAVR+TH+PTG+ + + E+SQ
Sbjct: 204 VAVLPEAEDIDVDIKPEDIRIDTMRASGAGGQHVNTTDSAVRITHLPTGIMV-VSAEKSQ 262
Query: 325 H 325
H
Sbjct: 263 H 263
>sp|Q2W6V3|RF1_MAGSA Peptide chain release factor 1 OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=prfA PE=3 SV=1
Length = 354
Score = 246 bits (628), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 150/200 (75%)
Query: 129 ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 188
E D DM D+A EE + L+ + LLPKD+ADE++ I+EVRAGTGGEEA+L
Sbjct: 64 EMMNDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGTGGEEAAL 123
Query: 189 FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 248
FA ++F+MYERY+ GW+FEV+ V ++ + G KEASA I+G V+ +LKFESG+HRVQR
Sbjct: 124 FAAELFRMYERYAGLHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQR 183
Query: 249 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 308
VP TE GR+HTSA +VAI+P+A+EVD++L + DLR D YRS GSGGQ NTT+SAVRVT
Sbjct: 184 VPATESQGRIHTSAATVAIMPEAEEVDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVT 243
Query: 309 HIPTGMTISIQDERSQHMVK 328
HIPTG+ ++ Q E+SQH K
Sbjct: 244 HIPTGLAVACQQEKSQHKNK 263
>sp|B5ZRR4|RF1_RHILW Peptide chain release factor 1 OS=Rhizobium leguminosarum bv.
trifolii (strain WSM2304) GN=prfA PE=3 SV=1
Length = 359
Score = 246 bits (628), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/270 (47%), Positives = 189/270 (70%), Gaps = 12/270 (4%)
Query: 61 LIKIMEQRVLAIERRSACLENLVNQPEASPAE--YSKANKELRKLRDSMHLISELRTKQK 118
+ K+ +++ +ERR +E ++ A PA Y K E +L+ +++++R +K
Sbjct: 1 MAKLPVEKMRELERRFGEIEARMS---AGPAADVYVKLASEYSELQP---VVTKIRAYEK 54
Query: 119 ---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCIL 175
E+ L++L+ + S D++M D+A EL ++ + L+ + LLPKD ADE+ IL
Sbjct: 55 AIAELADLETLLEDKSVDREMRDLAELELPEVKEQIEALEQEMQILLLPKDAADEKSAIL 114
Query: 176 EVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYG 235
E+RAGTGG EA+LFA D+F+MYER+S +KGWK EV+ +E + GYKE A I+G GV+
Sbjct: 115 EIRAGTGGSEAALFAGDLFRMYERFSAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFA 174
Query: 236 KLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGG 295
KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT RS G+GG
Sbjct: 175 KLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRSSGAGG 234
Query: 296 QHANTTNSAVRVTHIPTGMTISIQDERSQH 325
QH NTT+SAVR+TH+P+G+ ++ E+SQH
Sbjct: 235 QHVNTTDSAVRITHLPSGIVVT-SSEKSQH 263
>sp|A9IMM3|RF1_BART1 Peptide chain release factor 1 OS=Bartonella tribocorum (strain CIP
105476 / IBS 506) GN=prfA PE=3 SV=1
Length = 358
Score = 245 bits (626), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/266 (46%), Positives = 181/266 (68%), Gaps = 4/266 (1%)
Query: 61 LIKIMEQRVLAIERRSACLEN-LVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKE 119
++ + + R+ +E+R +E+ + P A Y K E +L+ + I L E
Sbjct: 1 MVSLPQDRIKQLEKRFEIIESQMTTNPNAET--YVKLASEYAELQPVIASIRALNALYGE 58
Query: 120 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRA 179
I L+++I + D +M +A EEL + ++L+ L LLPKD ADE+ I+E+RA
Sbjct: 59 ITELETIINDKQTDIEMRHLAQEELPSLHKKVEQLEKELQILLLPKDVADEKSAIVEIRA 118
Query: 180 GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKF 239
GTGG EA+LF+ D+F+MYERY+ WK EV+ ++E ++ GYKE A ISG GV+ KLK+
Sbjct: 119 GTGGSEAALFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIATISGKGVFSKLKY 178
Query: 240 ESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHAN 299
ESG+HRVQR+P TE GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R+ G+GGQH N
Sbjct: 179 ESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIDIRPEDIRIDTMRASGAGGQHVN 238
Query: 300 TTNSAVRVTHIPTGMTISIQDERSQH 325
TT+SAVR+THIPTG+ + +Q E+SQH
Sbjct: 239 TTDSAVRITHIPTGIMV-VQAEKSQH 263
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,400,423
Number of Sequences: 539616
Number of extensions: 4750551
Number of successful extensions: 16543
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 14832
Number of HSP's gapped (non-prelim): 1105
length of query: 330
length of database: 191,569,459
effective HSP length: 118
effective length of query: 212
effective length of database: 127,894,771
effective search space: 27113691452
effective search space used: 27113691452
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)