Query 020137
Match_columns 330
No_of_seqs 195 out of 716
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 07:18:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020137.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020137hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0027 Calmodulin and related 99.9 1.4E-21 2.9E-26 169.2 14.0 144 124-310 6-149 (151)
2 COG5126 FRQ1 Ca2+-binding prot 99.8 3.3E-20 7.1E-25 162.3 13.9 141 121-309 15-155 (160)
3 KOG0028 Ca2+-binding protein ( 99.7 5.6E-17 1.2E-21 140.5 13.7 140 124-310 31-170 (172)
4 PTZ00183 centrin; Provisional 99.7 1.9E-16 4.1E-21 135.2 14.9 138 126-310 17-154 (158)
5 PTZ00184 calmodulin; Provision 99.7 2E-16 4.3E-21 133.2 14.6 137 126-309 11-147 (149)
6 KOG0031 Myosin regulatory ligh 99.6 1.8E-14 4E-19 124.2 14.2 134 125-309 31-164 (171)
7 KOG0030 Myosin essential light 99.6 5.4E-14 1.2E-18 119.5 12.4 138 126-309 11-150 (152)
8 KOG0036 Predicted mitochondria 99.5 1.1E-13 2.5E-18 135.1 14.5 136 123-310 11-146 (463)
9 KOG0034 Ca2+/calmodulin-depend 99.5 2.3E-13 5E-18 122.4 14.7 141 127-311 34-176 (187)
10 KOG0037 Ca2+-binding protein, 99.5 9.2E-13 2E-17 119.6 14.4 132 126-310 57-188 (221)
11 KOG0044 Ca2+ sensor (EF-Hand s 99.4 4.7E-12 1E-16 114.3 14.5 163 108-309 8-174 (193)
12 PF13499 EF-hand_7: EF-hand do 99.2 3.7E-11 8.1E-16 89.1 7.4 65 238-308 2-66 (66)
13 KOG0027 Calmodulin and related 99.2 5.6E-11 1.2E-15 102.8 9.3 140 12-195 5-148 (151)
14 KOG0377 Protein serine/threoni 99.2 4.2E-10 9.2E-15 111.1 14.3 172 106-311 444-616 (631)
15 cd05022 S-100A13 S-100A13: S-1 99.1 3.6E-10 7.7E-15 90.2 9.4 72 238-318 10-83 (89)
16 PF13499 EF-hand_7: EF-hand do 99.1 2.4E-10 5.1E-15 84.7 5.1 66 127-194 1-66 (66)
17 cd05026 S-100Z S-100Z: S-100Z 99.1 9.2E-10 2E-14 88.2 8.9 69 238-312 12-83 (93)
18 cd05025 S-100A1 S-100A1: S-100 99.0 1.1E-09 2.3E-14 87.2 9.0 69 238-312 11-82 (92)
19 COG5126 FRQ1 Ca2+-binding prot 99.0 1.7E-09 3.7E-14 95.0 10.5 138 9-195 14-155 (160)
20 PLN02964 phosphatidylserine de 99.0 1.4E-09 3.1E-14 113.7 10.4 100 126-264 143-243 (644)
21 KOG4223 Reticulocalbin, calume 99.0 6.2E-10 1.3E-14 106.4 6.5 149 126-316 163-311 (325)
22 cd05027 S-100B S-100B: S-100B 99.0 2.3E-09 4.9E-14 85.3 8.6 65 238-312 10-81 (88)
23 cd05031 S-100A10_like S-100A10 99.0 1.9E-09 4.1E-14 86.2 8.1 68 238-311 10-80 (94)
24 cd05025 S-100A1 S-100A1: S-100 98.9 4E-09 8.7E-14 83.9 8.0 70 125-196 8-80 (92)
25 cd05026 S-100Z S-100Z: S-100Z 98.9 3.8E-09 8.3E-14 84.6 7.5 70 126-197 10-82 (93)
26 cd05022 S-100A13 S-100A13: S-1 98.9 9.7E-09 2.1E-13 82.0 9.2 67 126-197 8-76 (89)
27 PTZ00183 centrin; Provisional 98.9 1E-08 2.2E-13 87.3 9.9 136 12-195 14-153 (158)
28 KOG0044 Ca2+ sensor (EF-Hand s 98.9 7.8E-09 1.7E-13 93.5 9.6 153 76-264 20-175 (193)
29 PTZ00184 calmodulin; Provision 98.9 1.9E-08 4E-13 84.4 11.1 126 23-194 17-146 (149)
30 cd00213 S-100 S-100: S-100 dom 98.8 2E-08 4.4E-13 78.9 9.3 73 234-313 7-82 (88)
31 cd05029 S-100A6 S-100A6: S-100 98.8 1.8E-08 3.9E-13 80.1 8.9 72 234-313 9-82 (88)
32 cd05027 S-100B S-100B: S-100B 98.8 1.2E-08 2.7E-13 81.1 7.8 66 126-197 8-80 (88)
33 cd05031 S-100A10_like S-100A10 98.8 9.5E-09 2.1E-13 82.1 7.0 70 125-196 7-79 (94)
34 smart00027 EH Eps15 homology d 98.8 2.3E-08 5.1E-13 80.1 9.3 76 238-329 12-87 (96)
35 cd05023 S-100A11 S-100A11: S-1 98.8 2.4E-08 5.2E-13 79.6 8.5 69 238-311 11-81 (89)
36 KOG0038 Ca2+-binding kinase in 98.8 3.4E-08 7.3E-13 85.2 9.7 105 169-309 72-176 (189)
37 cd00052 EH Eps15 homology doma 98.8 3.1E-08 6.8E-13 72.8 7.9 63 239-313 2-64 (67)
38 KOG4223 Reticulocalbin, calume 98.7 8E-08 1.7E-12 92.1 11.5 150 124-309 75-227 (325)
39 KOG0037 Ca2+-binding protein, 98.7 2.1E-07 4.6E-12 84.9 13.2 146 21-256 61-210 (221)
40 cd05029 S-100A6 S-100A6: S-100 98.7 4.7E-08 1E-12 77.8 7.4 68 127-197 11-80 (88)
41 cd00052 EH Eps15 homology doma 98.7 8.3E-08 1.8E-12 70.5 7.7 62 128-197 1-62 (67)
42 cd00213 S-100 S-100: S-100 dom 98.7 8.4E-08 1.8E-12 75.3 7.8 69 126-196 8-79 (88)
43 PF13833 EF-hand_8: EF-hand do 98.6 6.1E-08 1.3E-12 69.2 5.5 52 249-310 1-53 (54)
44 KOG0034 Ca2+/calmodulin-depend 98.6 3.8E-07 8.1E-12 82.3 11.8 112 124-265 64-176 (187)
45 smart00027 EH Eps15 homology d 98.6 2.1E-07 4.5E-12 74.6 7.3 65 124-196 8-72 (96)
46 cd00051 EFh EF-hand, calcium b 98.5 3.1E-07 6.8E-12 64.5 6.6 61 238-308 2-62 (63)
47 cd00252 SPARC_EC SPARC_EC; ext 98.5 2.6E-07 5.7E-12 77.3 6.9 57 238-308 50-106 (116)
48 cd05023 S-100A11 S-100A11: S-1 98.5 6.3E-07 1.4E-11 71.4 8.4 71 126-197 9-81 (89)
49 KOG2643 Ca2+ binding protein, 98.5 6.5E-06 1.4E-10 81.8 16.4 206 22-312 238-455 (489)
50 cd05030 calgranulins Calgranul 98.5 6.9E-07 1.5E-11 70.8 7.8 73 234-313 7-82 (88)
51 cd00051 EFh EF-hand, calcium b 98.4 8.4E-07 1.8E-11 62.2 6.3 61 128-194 2-62 (63)
52 cd00252 SPARC_EC SPARC_EC; ext 98.4 4.1E-06 8.9E-11 70.1 10.5 63 122-194 44-106 (116)
53 PF13833 EF-hand_8: EF-hand do 98.4 7.7E-07 1.7E-11 63.5 5.2 52 139-196 1-53 (54)
54 PLN02964 phosphatidylserine de 98.2 6.2E-06 1.4E-10 86.7 10.9 185 74-310 42-243 (644)
55 KOG0041 Predicted Ca2+-binding 98.2 5.2E-06 1.1E-10 75.2 8.6 113 78-196 47-163 (244)
56 cd05030 calgranulins Calgranul 98.2 4E-06 8.7E-11 66.4 6.6 69 126-196 8-79 (88)
57 KOG0028 Ca2+-binding protein ( 98.2 5.3E-06 1.1E-10 72.6 7.1 122 29-196 48-170 (172)
58 PF14658 EF-hand_9: EF-hand do 98.1 5.8E-06 1.3E-10 62.4 5.4 63 240-311 2-65 (66)
59 KOG0040 Ca2+-binding actin-bun 98.1 2.7E-05 5.9E-10 86.2 12.5 139 126-308 2253-2396(2399)
60 KOG0377 Protein serine/threoni 98.1 1.6E-05 3.4E-10 79.3 9.7 155 8-196 446-615 (631)
61 PF00036 EF-hand_1: EF hand; 98.1 3.7E-06 8E-11 53.4 3.2 28 283-310 1-28 (29)
62 KOG0041 Predicted Ca2+-binding 98.1 1.6E-05 3.5E-10 72.0 8.4 64 238-311 101-164 (244)
63 cd05024 S-100A10 S-100A10: A s 98.0 2.8E-05 6E-10 62.4 8.5 70 235-312 8-78 (91)
64 KOG2643 Ca2+ binding protein, 98.0 6E-05 1.3E-09 75.1 12.5 140 126-309 233-383 (489)
65 KOG4251 Calcium binding protei 98.0 6.8E-06 1.5E-10 76.6 5.2 158 121-308 96-262 (362)
66 PF14658 EF-hand_9: EF-hand do 98.0 1.3E-05 2.8E-10 60.5 5.6 62 130-196 2-64 (66)
67 PF00036 EF-hand_1: EF hand; 98.0 8.4E-06 1.8E-10 51.7 3.4 29 127-155 1-29 (29)
68 KOG2562 Protein phosphatase 2 97.9 4.1E-05 8.8E-10 76.8 8.3 131 131-306 283-420 (493)
69 cd05024 S-100A10 S-100A10: A s 97.9 7E-05 1.5E-09 60.1 8.1 68 127-197 9-77 (91)
70 PRK12309 transaldolase/EF-hand 97.8 0.00012 2.6E-09 73.1 9.9 57 234-313 332-388 (391)
71 KOG0036 Predicted mitochondria 97.7 0.00026 5.7E-09 70.3 11.0 141 116-310 41-183 (463)
72 PF13405 EF-hand_6: EF-hand do 97.7 3.5E-05 7.6E-10 49.1 3.3 30 127-156 1-31 (31)
73 KOG0031 Myosin regulatory ligh 97.7 0.00017 3.6E-09 63.0 8.3 138 6-195 23-164 (171)
74 PF13405 EF-hand_6: EF-hand do 97.7 4.8E-05 1E-09 48.5 3.2 29 238-266 2-31 (31)
75 PF13202 EF-hand_5: EF hand; P 97.5 8.4E-05 1.8E-09 45.5 2.7 25 284-308 1-25 (25)
76 PF13202 EF-hand_5: EF hand; P 97.5 0.00012 2.6E-09 44.8 2.9 24 239-262 2-25 (25)
77 PF10591 SPARC_Ca_bdg: Secrete 97.5 9.2E-05 2E-09 61.6 3.1 105 80-192 8-112 (113)
78 KOG0038 Ca2+-binding kinase in 97.4 0.00015 3.3E-09 62.9 4.0 93 75-195 84-176 (189)
79 PRK12309 transaldolase/EF-hand 97.4 0.00047 1E-08 69.0 7.9 58 120-196 328-385 (391)
80 PF10591 SPARC_Ca_bdg: Secrete 97.4 0.00057 1.2E-08 56.8 6.7 61 234-306 52-112 (113)
81 KOG4065 Uncharacterized conser 97.3 0.00066 1.4E-08 56.7 6.1 68 240-307 71-142 (144)
82 KOG4666 Predicted phosphate ac 97.3 0.00052 1.1E-08 66.4 6.0 100 169-310 260-359 (412)
83 KOG0751 Mitochondrial aspartat 97.2 0.0051 1.1E-07 62.6 12.1 146 127-318 34-183 (694)
84 PF12763 EF-hand_4: Cytoskelet 97.1 0.0013 2.8E-08 54.1 6.5 63 126-197 10-72 (104)
85 KOG2562 Protein phosphatase 2 97.0 0.0082 1.8E-07 60.6 12.3 155 126-308 174-341 (493)
86 KOG0751 Mitochondrial aspartat 97.0 0.0071 1.5E-07 61.5 11.4 175 76-304 63-238 (694)
87 PF12763 EF-hand_4: Cytoskelet 96.9 0.004 8.6E-08 51.2 7.2 67 238-317 12-78 (104)
88 KOG4065 Uncharacterized conser 96.8 0.0026 5.6E-08 53.2 5.2 63 130-192 71-141 (144)
89 KOG4251 Calcium binding protei 96.8 0.0021 4.5E-08 60.3 5.1 63 238-308 103-166 (362)
90 KOG0030 Myosin essential light 96.6 0.02 4.3E-07 49.5 9.4 107 168-313 11-119 (152)
91 KOG1029 Endocytic adaptor prot 96.5 0.018 3.8E-07 61.4 10.7 157 129-311 19-258 (1118)
92 KOG0046 Ca2+-binding actin-bun 96.5 0.0079 1.7E-07 61.5 7.9 72 234-314 18-89 (627)
93 smart00054 EFh EF-hand, calciu 96.2 0.0048 1.1E-07 36.1 2.6 27 284-310 2-28 (29)
94 KOG0046 Ca2+-binding actin-bun 96.2 0.01 2.2E-07 60.8 6.2 68 126-197 19-86 (627)
95 PF14788 EF-hand_10: EF hand; 96.1 0.013 2.8E-07 42.1 5.0 49 252-310 1-49 (51)
96 KOG0040 Ca2+-binding actin-bun 96.1 0.036 7.9E-07 62.6 10.4 75 231-309 2249-2323(2399)
97 smart00054 EFh EF-hand, calciu 95.6 0.014 2.9E-07 34.1 2.8 27 128-154 2-28 (29)
98 PF14788 EF-hand_10: EF hand; 95.1 0.078 1.7E-06 38.1 5.8 49 142-196 1-49 (51)
99 KOG0169 Phosphoinositide-speci 94.7 0.18 3.9E-06 53.8 9.8 136 124-309 134-273 (746)
100 PF05042 Caleosin: Caleosin re 94.5 0.16 3.4E-06 45.4 7.4 110 127-263 8-165 (174)
101 KOG4666 Predicted phosphate ac 93.2 0.19 4.1E-06 49.1 5.8 103 126-266 259-361 (412)
102 KOG3555 Ca2+-binding proteogly 92.5 0.16 3.4E-06 49.9 4.4 103 124-266 209-312 (434)
103 PF09279 EF-hand_like: Phospho 91.2 0.49 1.1E-05 36.4 5.2 64 127-195 1-68 (83)
104 KOG1707 Predicted Ras related/ 89.7 2.9 6.3E-05 44.0 10.5 162 125-308 194-375 (625)
105 KOG3866 DNA-binding protein of 89.6 0.45 9.8E-06 46.3 4.3 62 130-193 248-321 (442)
106 KOG0035 Ca2+-binding actin-bun 89.5 1.3 2.8E-05 48.7 8.1 104 124-260 745-848 (890)
107 PF05099 TerB: Tellurite resis 89.0 0.32 6.9E-06 40.8 2.6 98 139-274 36-133 (140)
108 KOG3555 Ca2+-binding proteogly 87.9 0.46 1E-05 46.8 3.2 58 238-309 252-309 (434)
109 KOG4578 Uncharacterized conser 87.8 0.33 7.1E-06 47.5 2.1 64 237-309 334-397 (421)
110 COG4103 Uncharacterized protei 87.7 4.4 9.6E-05 35.2 8.7 114 118-273 24-137 (148)
111 PF09279 EF-hand_like: Phospho 87.2 1.3 2.9E-05 33.9 4.9 63 238-309 2-68 (83)
112 KOG1029 Endocytic adaptor prot 84.5 1 2.2E-05 48.6 3.8 148 23-195 22-256 (1118)
113 KOG3866 DNA-binding protein of 84.5 1.6 3.5E-05 42.5 5.0 68 240-308 248-322 (442)
114 cd07176 terB tellurite resista 84.0 4.9 0.00011 31.9 7.0 95 140-270 16-110 (111)
115 cd07313 terB_like_2 tellurium 80.6 8 0.00017 30.6 7.0 89 139-265 12-100 (104)
116 PRK09430 djlA Dna-J like membr 79.6 12 0.00027 35.6 9.0 98 139-273 68-165 (267)
117 KOG4578 Uncharacterized conser 79.4 1.5 3.2E-05 43.1 2.7 61 173-264 338-398 (421)
118 KOG2243 Ca2+ release channel ( 79.1 3.8 8.2E-05 47.0 5.8 60 240-310 4061-4120(5019)
119 KOG0035 Ca2+-binding actin-bun 77.8 5.9 0.00013 43.6 6.9 72 235-312 747-818 (890)
120 KOG2243 Ca2+ release channel ( 77.2 9.3 0.0002 44.2 8.0 59 130-195 4061-4119(5019)
121 PF09069 EF-hand_3: EF-hand; 75.0 24 0.00051 28.3 8.0 63 126-195 3-74 (90)
122 KOG0998 Synaptic vesicle prote 74.2 2.3 4.9E-05 47.0 2.7 253 23-314 17-349 (847)
123 KOG1955 Ral-GTPase effector RA 74.0 6.8 0.00015 40.6 5.7 65 234-310 229-293 (737)
124 KOG0169 Phosphoinositide-speci 73.8 30 0.00065 37.6 10.7 96 169-310 137-232 (746)
125 KOG0042 Glycerol-3-phosphate d 73.5 4.8 0.0001 42.3 4.6 64 127-196 594-657 (680)
126 cd07316 terB_like_DjlA N-termi 69.3 38 0.00082 26.6 8.2 90 140-266 13-102 (106)
127 KOG0042 Glycerol-3-phosphate d 68.1 8.3 0.00018 40.6 4.9 65 238-312 595-659 (680)
128 PF05517 p25-alpha: p25-alpha 62.5 43 0.00092 29.1 7.8 66 129-197 2-70 (154)
129 COG3793 TerB Tellurite resista 62.2 37 0.00081 29.6 7.1 99 139-273 37-139 (144)
130 PF05517 p25-alpha: p25-alpha 62.1 31 0.00067 30.0 6.8 61 246-313 12-72 (154)
131 PF09068 EF-hand_2: EF hand; 60.4 64 0.0014 27.3 8.2 81 169-264 42-125 (127)
132 cd07177 terB_like tellurium re 60.3 57 0.0012 25.0 7.5 28 235-265 73-100 (104)
133 KOG1955 Ral-GTPase effector RA 55.6 18 0.00038 37.7 4.6 65 124-196 229-293 (737)
134 PLN02952 phosphoinositide phos 55.4 86 0.0019 33.5 9.9 67 238-309 40-109 (599)
135 PF08726 EFhand_Ca_insen: Ca2+ 54.1 9.9 0.00021 29.0 2.0 24 238-262 8-31 (69)
136 PF14513 DAG_kinase_N: Diacylg 53.9 19 0.00041 31.1 4.0 30 284-313 27-63 (138)
137 cd07313 terB_like_2 tellurium 52.7 14 0.0003 29.3 2.8 53 250-310 13-65 (104)
138 KOG2768 Translation initiation 50.0 20 0.00044 33.3 3.7 41 53-94 135-180 (231)
139 PF00404 Dockerin_1: Dockerin 47.9 19 0.00042 21.1 2.1 14 136-149 1-14 (21)
140 COG0634 Hpt Hypoxanthine-guani 45.2 33 0.00072 30.9 4.2 38 76-113 9-47 (178)
141 PF14425 Imm3: Immunity protei 43.7 70 0.0015 26.9 5.7 82 113-196 16-98 (117)
142 PRK06464 phosphoenolpyruvate s 43.5 1.1E+02 0.0024 33.8 8.7 77 79-155 547-658 (795)
143 PF08726 EFhand_Ca_insen: Ca2+ 43.3 22 0.00048 27.1 2.4 26 126-152 6-31 (69)
144 PRK09279 pyruvate phosphate di 41.9 5.1E+02 0.011 29.2 13.5 135 50-198 38-189 (879)
145 KOG1707 Predicted Ras related/ 41.2 29 0.00062 36.8 3.6 67 119-193 308-374 (625)
146 KOG0998 Synaptic vesicle prote 39.9 24 0.00053 39.1 3.1 165 125-313 10-193 (847)
147 PF09069 EF-hand_3: EF-hand; 39.6 1.6E+02 0.0036 23.5 7.0 66 238-309 5-74 (90)
148 PF06892 Phage_CP76: Phage reg 38.6 2.5E+02 0.0055 24.7 8.8 90 171-265 35-129 (162)
149 PF04391 DUF533: Protein of un 38.1 1.1E+02 0.0023 27.9 6.4 32 236-273 146-177 (188)
150 KOG4347 GTPase-activating prot 37.4 67 0.0014 34.5 5.6 58 236-304 555-612 (671)
151 KOG4004 Matricellular protein 36.7 16 0.00035 33.7 0.9 55 242-308 193-248 (259)
152 PF04876 Tenui_NCP: Tenuivirus 36.2 3.1E+02 0.0067 24.3 9.0 26 171-196 86-111 (175)
153 KOG2871 Uncharacterized conser 34.7 31 0.00068 34.7 2.6 80 105-194 293-372 (449)
154 KOG2419 Phosphatidylserine dec 32.7 45 0.00098 35.9 3.5 83 238-321 439-544 (975)
155 COG3051 CitF Citrate lyase, al 32.5 20 0.00043 36.1 0.9 69 22-107 69-147 (513)
156 PRK09430 djlA Dna-J like membr 32.3 2.7E+02 0.0059 26.4 8.6 105 29-176 70-174 (267)
157 PRK13902 alaS alanyl-tRNA synt 32.0 4E+02 0.0086 30.0 10.9 47 251-313 428-475 (900)
158 KOG0039 Ferric reductase, NADH 32.0 80 0.0017 33.9 5.4 75 235-312 17-91 (646)
159 TIGR01828 pyru_phos_dikin pyru 30.9 8E+02 0.017 27.5 14.1 137 50-197 32-182 (856)
160 cd07311 terB_like_1 tellurium 30.3 3.2E+02 0.007 23.7 8.0 46 124-176 23-68 (150)
161 PF05042 Caleosin: Caleosin re 30.1 2E+02 0.0044 25.8 6.8 63 125-190 95-160 (174)
162 PF14425 Imm3: Immunity protei 30.0 3.4E+02 0.0073 22.9 8.5 84 235-325 28-112 (117)
163 TIGR01418 PEP_synth phosphoeno 30.0 2E+02 0.0042 31.8 8.0 75 81-155 542-651 (782)
164 KOG4347 GTPase-activating prot 29.7 70 0.0015 34.3 4.4 59 125-190 554-612 (671)
165 PF12631 GTPase_Cys_C: Catalyt 28.1 1E+02 0.0022 23.1 4.0 48 238-291 25-72 (73)
166 PLN02900 alanyl-tRNA synthetas 27.7 9.4E+02 0.02 27.3 12.8 60 238-313 396-455 (936)
167 PF13623 SurA_N_2: SurA N-term 26.8 4.1E+02 0.009 22.9 8.3 15 183-197 47-61 (145)
168 PRK00199 ihfB integration host 25.1 1E+02 0.0022 24.2 3.6 30 76-105 14-43 (94)
169 PF08414 NADPH_Ox: Respiratory 24.7 1.8E+02 0.0038 23.9 4.9 60 126-195 30-91 (100)
170 KOG1782 Small Nuclear ribonucl 24.7 94 0.002 26.4 3.4 34 94-128 13-46 (129)
171 TIGR03683 A-tRNA_syn_arch alan 24.3 5.9E+02 0.013 28.7 10.5 47 251-313 432-479 (902)
172 PLN02952 phosphoinositide phos 24.2 1.6E+02 0.0035 31.5 5.9 53 249-310 13-65 (599)
173 PF01411 tRNA-synt_2c: tRNA sy 23.7 3.9E+02 0.0084 28.2 8.6 128 137-311 294-424 (552)
174 PF12174 RST: RCD1-SRO-TAF4 (R 23.4 1.7E+02 0.0037 22.3 4.4 48 142-198 8-55 (70)
175 COG4103 Uncharacterized protei 23.2 2.1E+02 0.0045 25.1 5.3 60 240-309 34-93 (148)
176 PRK15423 hypoxanthine phosphor 23.0 1.4E+02 0.003 26.7 4.5 36 77-112 7-45 (178)
177 cd07176 terB tellurite resista 23.0 2.3E+02 0.005 22.0 5.4 12 283-294 80-91 (111)
178 PF02037 SAP: SAP domain; Int 22.8 2.1E+02 0.0045 18.4 4.2 24 252-279 3-26 (35)
179 KOG4004 Matricellular protein 22.0 33 0.00073 31.7 0.3 96 82-194 142-248 (259)
180 PF09851 SHOCT: Short C-termin 21.6 81 0.0018 19.9 2.0 17 296-312 14-30 (31)
181 PF05099 TerB: Tellurite resis 21.3 35 0.00077 28.2 0.3 16 250-265 37-52 (140)
182 PF05379 Peptidase_C23: Carlav 20.3 60 0.0013 25.8 1.4 47 91-137 6-57 (89)
183 PF07395 Mig-14: Mig-14; Inte 20.2 1.1E+02 0.0023 29.4 3.3 73 255-328 116-189 (264)
184 COG2511 GatE Archaeal Glu-tRNA 20.1 1.1E+03 0.023 25.3 12.6 96 139-265 533-628 (631)
No 1
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.87 E-value=1.4e-21 Score=169.15 Aligned_cols=144 Identities=15% Similarity=0.256 Sum_probs=119.2
Q ss_pred HHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHH
Q 020137 124 FAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIAD 203 (330)
Q Consensus 124 ~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~ 203 (330)
...+++++|..+|+|++|+|+..+|+.+++.+|. .|+.. ++..+++++|.|++|.|+++||+.+|.+.....
T Consensus 6 ~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~----~~t~~--el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~-- 77 (151)
T KOG0027|consen 6 QILELKEAFQLFDKDGDGKISVEELGAVLRSLGQ----NPTEE--ELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEK-- 77 (151)
T ss_pred HHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCC----CCCHH--HHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccc--
Confidence 4578999999999999999999999999999975 45544 899999999999999999999999887521100
Q ss_pred HHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHH
Q 020137 204 ALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLL 283 (330)
Q Consensus 204 ~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~ 283 (330)
. .......+ +++||+.||+|++|+||++||+.+|..+|... . +.+
T Consensus 78 ----------------~--------~~~~~~~e-l~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~----~------~~e 122 (151)
T KOG0027|consen 78 ----------------T--------DEEASSEE-LKEAFRVFDKDGDGFISASELKKVLTSLGEKL----T------DEE 122 (151)
T ss_pred ----------------c--------cccccHHH-HHHHHHHHccCCCCcCcHHHHHHHHHHhCCcC----C------HHH
Confidence 0 00001224 66999999999999999999999999997643 2 237
Q ss_pred HHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 284 YDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 284 i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
++++++.+|.|+||.|+|+||+++|..
T Consensus 123 ~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 123 CKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 999999999999999999999999863
No 2
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.84 E-value=3.3e-20 Score=162.28 Aligned_cols=141 Identities=15% Similarity=0.236 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHH
Q 020137 121 EDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQD 200 (330)
Q Consensus 121 ~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~ 200 (330)
+...-.+++++|..+|.|++|.|++.+|..+++.+|. +|+++ +|..|+..+|. +.+.|+|.+|+..|...+
T Consensus 15 t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~----~~s~~--ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~-- 85 (160)
T COG5126 15 TEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGF----NPSEA--EINKLFEEIDA-GNETVDFPEFLTVMSVKL-- 85 (160)
T ss_pred CHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCC----CCcHH--HHHHHHHhccC-CCCccCHHHHHHHHHHHh--
Confidence 3435578999999999999999999999999998764 55554 89999999999 999999999999886521
Q ss_pred HHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHH
Q 020137 201 IADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAV 280 (330)
Q Consensus 201 ~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~ 280 (330)
.. ....++ +..+|+.||+|++|+|+..||+.+++.+|..+ +
T Consensus 86 -----~~-----------------------~~~~Ee-l~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~--~-------- 126 (160)
T COG5126 86 -----KR-----------------------GDKEEE-LREAFKLFDKDHDGYISIGELRRVLKSLGERL--S-------- 126 (160)
T ss_pred -----cc-----------------------CCcHHH-HHHHHHHhCCCCCceecHHHHHHHHHhhcccC--C--------
Confidence 10 112345 55999999999999999999999999988643 1
Q ss_pred HHHHHHHHHhhcCCCCcccCHHHHHHHHH
Q 020137 281 VLLYDAVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 281 ~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
+++++.+|+.+|.|+||.|+|++|++++.
T Consensus 127 deev~~ll~~~d~d~dG~i~~~eF~~~~~ 155 (160)
T COG5126 127 DEEVEKLLKEYDEDGDGEIDYEEFKKLIK 155 (160)
T ss_pred HHHHHHHHHhcCCCCCceEeHHHHHHHHh
Confidence 24799999999999999999999999875
No 3
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=5.6e-17 Score=140.51 Aligned_cols=140 Identities=16% Similarity=0.231 Sum_probs=118.6
Q ss_pred HHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHH
Q 020137 124 FAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIAD 203 (330)
Q Consensus 124 ~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~ 203 (330)
-...++.+|+.||.+++|+|+.+||+.+++.+|. .|.+. ++..++..+|.++.|.|+|++|+..|...+..
T Consensus 31 q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGF----E~~k~--ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e--- 101 (172)
T KOG0028|consen 31 QKQEIKEAFELFDPDMAGKIDVEELKVAMRALGF----EPKKE--EILKLLADVDKEGSGKITFEDFRRVMTVKLGE--- 101 (172)
T ss_pred HHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCC----CcchH--HHHHHHHhhhhccCceechHHHHHHHHHHHhc---
Confidence 4578999999999999999999999999999975 34443 79999999999999999999999987653211
Q ss_pred HHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHH
Q 020137 204 ALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLL 283 (330)
Q Consensus 204 ~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~ 283 (330)
.+ ...+ +..+|+.+|-|++|+||..+|+.+...+|+.+ + |++
T Consensus 102 -------------------------~d--t~eE-i~~afrl~D~D~~Gkis~~~lkrvakeLgenl----t------D~E 143 (172)
T KOG0028|consen 102 -------------------------RD--TKEE-IKKAFRLFDDDKTGKISQRNLKRVAKELGENL----T------DEE 143 (172)
T ss_pred -------------------------cC--cHHH-HHHHHHcccccCCCCcCHHHHHHHHHHhCccc----c------HHH
Confidence 11 2344 55999999999999999999999999998643 2 347
Q ss_pred HHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 284 YDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 284 i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
+.+||.++|.|+||.|+.+||..+|+.
T Consensus 144 l~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 144 LMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHHHHhcccccccccHHHHHHHHhc
Confidence 999999999999999999999998864
No 4
>PTZ00183 centrin; Provisional
Probab=99.72 E-value=1.9e-16 Score=135.23 Aligned_cols=138 Identities=14% Similarity=0.249 Sum_probs=112.3
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADAL 205 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L 205 (330)
.++.++|..+|.+++|.|+..|++.+++.+| .++.. ..+..++..+|.+++|.|+++||+..+... .
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g----~~~~~--~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~-------~ 83 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLG----FEPKK--EEIKQMIADVDKDGSGKIDFEEFLDIMTKK-------L 83 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhC----CCCCH--HHHHHHHHHhCCCCCCcEeHHHHHHHHHHH-------h
Confidence 5789999999999999999999999999885 33433 378999999999999999999999876431 0
Q ss_pred hhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHH
Q 020137 206 AEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYD 285 (330)
Q Consensus 206 ~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~ 285 (330)
.. + .....++.+|+.+|+|++|+|+.+|++.++...|. +... ..+.
T Consensus 84 ~~-----------------------~-~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~----~l~~------~~~~ 129 (158)
T PTZ00183 84 GE-----------------------R-DPREEILKAFRLFDDDKTGKISLKNLKRVAKELGE----TITD------EELQ 129 (158)
T ss_pred cC-----------------------C-CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC----CCCH------HHHH
Confidence 00 0 01223678999999999999999999999988763 2222 3689
Q ss_pred HHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 286 AVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 286 ~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
.+|..+|.|++|.|+|+||+.+++.
T Consensus 130 ~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 130 EMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 9999999999999999999998865
No 5
>PTZ00184 calmodulin; Provisional
Probab=99.71 E-value=2e-16 Score=133.18 Aligned_cols=137 Identities=15% Similarity=0.245 Sum_probs=111.3
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADAL 205 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L 205 (330)
..+++.|..+|.+++|+|+.+++..++..++. ++.. ..+..+++.+|.+++|.|+|++|+.++...+
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~----~~~~--~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~------- 77 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ----NPTE--AELQDMINEVDADGNGTIDFPEFLTLMARKM------- 77 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCC----CCCH--HHHHHHHHhcCcCCCCcCcHHHHHHHHHHhc-------
Confidence 57889999999999999999999999988753 4443 3789999999999999999999998765310
Q ss_pred hhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHH
Q 020137 206 AEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYD 285 (330)
Q Consensus 206 ~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~ 285 (330)
.. ....+.+..+|+.+|.|++|+|+.++++.++..++. +... ..+.
T Consensus 78 ~~------------------------~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~----~~~~------~~~~ 123 (149)
T PTZ00184 78 KD------------------------TDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE----KLTD------EEVD 123 (149)
T ss_pred cC------------------------CcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC----CCCH------HHHH
Confidence 00 001123568999999999999999999999988753 2222 3688
Q ss_pred HHHHhhcCCCCcccCHHHHHHHHH
Q 020137 286 AVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 286 ~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
.+|+.+|.|++|.|+|+||+.++.
T Consensus 124 ~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 124 EMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHhcCCCCCCcCcHHHHHHHHh
Confidence 999999999999999999998874
No 6
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.60 E-value=1.8e-14 Score=124.25 Aligned_cols=134 Identities=14% Similarity=0.198 Sum_probs=112.1
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHH
Q 020137 125 AMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADA 204 (330)
Q Consensus 125 ~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~ 204 (330)
=.+++++|..+|.|+||.|++++|+..+.++|. +++. ++++.|+++ ..|+|+|.-|+.++.. +
T Consensus 31 IqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk----~~~d--~elDaM~~E----a~gPINft~FLTmfGe-------k 93 (171)
T KOG0031|consen 31 IQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGK----IASD--EELDAMMKE----APGPINFTVFLTMFGE-------K 93 (171)
T ss_pred HHHHHHHHHHHhccCCCcccHHHHHHHHHHcCC----CCCH--HHHHHHHHh----CCCCeeHHHHHHHHHH-------H
Confidence 468999999999999999999999999999986 3333 379999988 5789999999998864 3
Q ss_pred HhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHH
Q 020137 205 LAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLY 284 (330)
Q Consensus 205 L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i 284 (330)
|. |. + .++. +..||+.||.+++|+|..+.||.+|...|..+ + +++|
T Consensus 94 L~--------------gt-------d--pe~~-I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~----~------~eEV 139 (171)
T KOG0031|consen 94 LN--------------GT-------D--PEEV-ILNAFKTFDDEGSGKIDEDYLRELLTTMGDRF----T------DEEV 139 (171)
T ss_pred hc--------------CC-------C--HHHH-HHHHHHhcCccCCCccCHHHHHHHHHHhcccC----C------HHHH
Confidence 32 21 1 2334 55999999999999999999999999988643 2 2379
Q ss_pred HHHHHhhcCCCCcccCHHHHHHHHH
Q 020137 285 DAVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 285 ~~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
++|++.+-.|..|.++|.+|..+++
T Consensus 140 ~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 140 DEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHHHhCCcccCCceeHHHHHHHHH
Confidence 9999999999999999999999887
No 7
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.55 E-value=5.4e-14 Score=119.51 Aligned_cols=138 Identities=17% Similarity=0.224 Sum_probs=110.6
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCC--CCCccCHHHHHHHHHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAE--GEEELGQAQFAELLQQVLQDIAD 203 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d--~dG~I~~eEF~~~~~~il~~~a~ 203 (330)
++++++|..||+.+||+|+...+..+|+.+|. .|+.+ ++.+.+.+++.+ +-..++|++|+-++..+ |.
T Consensus 11 ~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~----nPT~a--eV~k~l~~~~~~~~~~~rl~FE~fLpm~q~v----ak 80 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTGDGKISGSQVGDVLRALGQ----NPTNA--EVLKVLGQPKRREMNVKRLDFEEFLPMYQQV----AK 80 (152)
T ss_pred HHHHHHHHHHhccCcccccHHHHHHHHHHhcC----CCcHH--HHHHHHcCcccchhhhhhhhHHHHHHHHHHH----Hh
Confidence 79999999999999999999999999999975 67765 788888888777 55789999999876542 22
Q ss_pred HHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHH
Q 020137 204 ALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLL 283 (330)
Q Consensus 204 ~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~ 283 (330)
.- ..-+.++.+ +.++.||++++|+|...|||++|.++|..++ + .+
T Consensus 81 nk------------------------~q~t~edfv-egLrvFDkeg~G~i~~aeLRhvLttlGekl~----e------eE 125 (152)
T KOG0030|consen 81 NK------------------------DQGTYEDFV-EGLRVFDKEGNGTIMGAELRHVLTTLGEKLT----E------EE 125 (152)
T ss_pred cc------------------------ccCcHHHHH-HHHHhhcccCCcceeHHHHHHHHHHHHhhcc----H------HH
Confidence 21 112345656 8899999999999999999999999997652 2 25
Q ss_pred HHHHHHhhcCCCCcccCHHHHHHHHH
Q 020137 284 YDAVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 284 i~~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
++++++.. .|.+|.|+|+.|++.+.
T Consensus 126 Ve~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 126 VEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred HHHHHccc-cccCCcCcHHHHHHHHh
Confidence 78887765 36789999999988763
No 8
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.53 E-value=1.1e-13 Score=135.11 Aligned_cols=136 Identities=14% Similarity=0.241 Sum_probs=114.8
Q ss_pred HHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHH
Q 020137 123 DFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIA 202 (330)
Q Consensus 123 ~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a 202 (330)
+-+.+++.+|+.||.+++|.++..+|.+++.++.. | .........+++..|.|.||.++|+||..|+..
T Consensus 11 er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~----~-~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~------ 79 (463)
T KOG0036|consen 11 ERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDH----P-KPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN------ 79 (463)
T ss_pred HHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCC----C-CCchHHHHHHHHhcccCcCCcccHHHHHHHHHH------
Confidence 36789999999999999999999999999999864 3 111225788999999999999999999998753
Q ss_pred HHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHH
Q 020137 203 DALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVL 282 (330)
Q Consensus 203 ~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~ 282 (330)
.+.+ +..+|..+|.|+||.|+.+|+...|+.+|..+ . +.
T Consensus 80 ------------------------------~E~~-l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l----~------de 118 (463)
T KOG0036|consen 80 ------------------------------KELE-LYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQL----S------DE 118 (463)
T ss_pred ------------------------------hHHH-HHHHHhhhccccCCccCHHHHHHHHHHhCCcc----C------HH
Confidence 1234 44899999999999999999999999987643 2 23
Q ss_pred HHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 283 LYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 283 ~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
.++.+|+.+|.|+++.|+++||.+.+.-
T Consensus 119 ~~~k~~e~~d~~g~~~I~~~e~rd~~ll 146 (463)
T KOG0036|consen 119 KAAKFFEHMDKDGKATIDLEEWRDHLLL 146 (463)
T ss_pred HHHHHHHHhccCCCeeeccHHHHhhhhc
Confidence 5788999999999999999999998763
No 9
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.52 E-value=2.3e-13 Score=122.43 Aligned_cols=141 Identities=15% Similarity=0.196 Sum_probs=111.3
Q ss_pred HHHHHhhhhcCC-CCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCc-cCHHHHHHHHHHHHHHHHHH
Q 020137 127 LAENLFTDLDTE-DKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEE-LGQAQFAELLQQVLQDIADA 204 (330)
Q Consensus 127 ~~~~~F~~lD~d-~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~-I~~eEF~~~~~~il~~~a~~ 204 (330)
.+...|..+|.+ ++|+|+++++..+.. +. ..| ..+.|+..++.+++|. |+|++|+..+.-
T Consensus 34 ~L~~rF~kl~~~~~~g~lt~eef~~i~~-~~----~Np-----~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~-------- 95 (187)
T KOG0034|consen 34 RLYERFKKLDRNNGDGYLTKEEFLSIPE-LA----LNP-----LADRIIDRFDTDGNGDPVDFEEFVRLLSV-------- 95 (187)
T ss_pred HHHHHHHHhccccccCccCHHHHHHHHH-Hh----cCc-----HHHHHHHHHhccCCCCccCHHHHHHHHhh--------
Confidence 467789999999 999999999998883 22 123 5789999999999998 999999987643
Q ss_pred HhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHH
Q 020137 205 LAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLY 284 (330)
Q Consensus 205 L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i 284 (330)
|.. +...+.-++-||+.+|.|++|+|+.+|+..++..+-.. +... ..++....+
T Consensus 96 --------------f~~---------~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~-~~~~--~~e~~~~i~ 149 (187)
T KOG0034|consen 96 --------------FSP---------KASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGE-NDDM--SDEQLEDIV 149 (187)
T ss_pred --------------hcC---------CccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHcc-CCcc--hHHHHHHHH
Confidence 110 11112226689999999999999999999999987421 1121 347788899
Q ss_pred HHHHHhhcCCCCcccCHHHHHHHHHHH
Q 020137 285 DAVFADTDNSKNVVETEDEFREHVKDI 311 (330)
Q Consensus 285 ~~~f~~~D~d~DG~I~~eEF~~lm~ei 311 (330)
+..|.++|.|+||.|+|+||++.+...
T Consensus 150 d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 150 DKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 999999999999999999999998643
No 10
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.47 E-value=9.2e-13 Score=119.60 Aligned_cols=132 Identities=16% Similarity=0.227 Sum_probs=112.0
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADAL 205 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L 205 (330)
+.+...|...|+|+.|.|+.+||..+|...+- .|-+. ..+.-|+..+|.+.+|.|.+.||.++-+.
T Consensus 57 ~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~----~~Fs~-~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~--------- 122 (221)
T KOG0037|consen 57 PQLAGWFQSVDRDRSGRILAKELQQALSNGTW----SPFSI-ETCRLMISMFDRDNSGTIGFKEFKALWKY--------- 122 (221)
T ss_pred HHHHHHHHhhCccccccccHHHHHHHhhcCCC----CCCCH-HHHHHHHHHhcCCCCCccCHHHHHHHHHH---------
Confidence 47899999999999999999999999986542 33332 36899999999999999999999987653
Q ss_pred hhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHH
Q 020137 206 AEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYD 285 (330)
Q Consensus 206 ~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~ 285 (330)
++. |+++|+.+|+|++|+|+..|||.+|..+|-. |+| ..++
T Consensus 123 ----------------------------i~~-Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~--Lsp--------q~~~ 163 (221)
T KOG0037|consen 123 ----------------------------INQ-WRNVFRTYDRDRSGTIDSSELRQALTQLGYR--LSP--------QFYN 163 (221)
T ss_pred ----------------------------HHH-HHHHHHhcccCCCCcccHHHHHHHHHHcCcC--CCH--------HHHH
Confidence 123 8899999999999999999999999999854 343 3689
Q ss_pred HHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 286 AVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 286 ~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
-++++.|.-++|.|+|++|++....
T Consensus 164 ~lv~kyd~~~~g~i~FD~FI~ccv~ 188 (221)
T KOG0037|consen 164 LLVRKYDRFGGGRIDFDDFIQCCVV 188 (221)
T ss_pred HHHHHhccccCCceeHHHHHHHHHH
Confidence 9999999888999999999887643
No 11
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.41 E-value=4.7e-12 Score=114.32 Aligned_cols=163 Identities=15% Similarity=0.170 Sum_probs=119.1
Q ss_pred EeechhHHHhhcChHHHHHHHHHHhhhhcCCC-CCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccC
Q 020137 108 VLDGNTLKLFLEDEDDFAMLAENLFTDLDTED-KGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELG 186 (330)
Q Consensus 108 ~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~-DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~ 186 (330)
.+..+.+...+..+.==..++..+++.|=.+. +|.++.++++.++.... |-..++...+.+++.+|.|+||.|+
T Consensus 8 ~~~~~~~e~l~~~t~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~f-----p~gd~~~y~~~vF~~fD~~~dg~i~ 82 (193)
T KOG0044|consen 8 KLQPESLEQLVQQTKFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFF-----PDGDASKYAELVFRTFDKNKDGTID 82 (193)
T ss_pred cCCcHHHHHHHHhcCCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHC-----CCCCHHHHHHHHHHHhcccCCCCcC
Confidence 34445566666565522478888888887776 89999999999999885 3222223678899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhc
Q 020137 187 QAQFAELLQQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNW 266 (330)
Q Consensus 187 ~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g 266 (330)
|.||+..+.-+ ..| ...+-++-+|+.+|.||||+|+++|+-.++..+.
T Consensus 83 F~Efi~als~~---------------------~rG-----------t~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~ 130 (193)
T KOG0044|consen 83 FLEFICALSLT---------------------SRG-----------TLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIY 130 (193)
T ss_pred HHHHHHHHHHH---------------------cCC-----------cHHHHhhhhheeecCCCCceEcHHHHHHHHHHHH
Confidence 99998765421 112 1223355689999999999999999877766654
Q ss_pred hhcC---CCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHH
Q 020137 267 KDIG---LPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 267 ~~~g---lp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
.-.| .| ...+.....++.+|+++|.|+||.|+++||....+
T Consensus 131 ~m~~~~~~~--~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~ 174 (193)
T KOG0044|consen 131 QMTGSKALP--EDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCK 174 (193)
T ss_pred HHcccccCC--cccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhh
Confidence 3222 22 11123345799999999999999999999988775
No 12
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.22 E-value=3.7e-11 Score=89.08 Aligned_cols=65 Identities=18% Similarity=0.235 Sum_probs=56.6
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHV 308 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm 308 (330)
++.+|+.+|+|++|+|+.+||+.++..++.... .++++..+..+|+.+|.|+||.|+|+||+++|
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~------~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMS------DEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHST------HHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhccccc------HHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 558999999999999999999999999874321 24567789999999999999999999999876
No 13
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.21 E-value=5.6e-11 Score=102.75 Aligned_cols=140 Identities=14% Similarity=0.167 Sum_probs=105.0
Q ss_pred hhhhhhhcCCCCCCCCC---CCcchHhhHH-HhhhcccccccCCCCCchhhHHHhhhhccCCCCccccccCCCHHHHHHH
Q 020137 12 TQLRSLSHPLALPISDG---STVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHIAGSDNDVTFRIKDFDRDHASRL 87 (330)
Q Consensus 12 s~~~~~~~~~~f~~ld~---g~~~~~e~~~-~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~ 87 (330)
..+.++- ..|...|. |++|..||.. +-.+|.. .+.---..+++++.. .+.+.++.++|..+
T Consensus 5 ~~~~el~--~~F~~fD~d~~G~i~~~el~~~lr~lg~~-------~t~~el~~~~~~~D~------dg~g~I~~~eF~~l 69 (151)
T KOG0027|consen 5 EQILELK--EAFQLFDKDGDGKISVEELGAVLRSLGQN-------PTEEELRDLIKEIDL------DGDGTIDFEEFLDL 69 (151)
T ss_pred HHHHHHH--HHHHHHCCCCCCcccHHHHHHHHHHcCCC-------CCHHHHHHHHHHhCC------CCCCeEcHHHHHHH
Confidence 3444444 34555666 9999999999 7666661 112233446666665 23789999999999
Q ss_pred HHHHHHHHHhHhccCCeEEEEeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCH
Q 020137 88 ASDYITAIADELKDDPLVVSVLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEF 167 (330)
Q Consensus 88 l~~~l~~~a~~L~~~pivi~~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~ 167 (330)
+..........- . -..+++++|+.||+|++|+|+.+||+.+|.++|.. .+ .
T Consensus 70 ~~~~~~~~~~~~-------------------~----~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~----~~--~ 120 (151)
T KOG0027|consen 70 MEKLGEEKTDEE-------------------A----SSEELKEAFRVFDKDGDGFISASELKKVLTSLGEK----LT--D 120 (151)
T ss_pred HHhhhccccccc-------------------c----cHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCc----CC--H
Confidence 987765433222 2 34599999999999999999999999999999753 33 3
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHHH
Q 020137 168 PQLNDILKKHGAEGEEELGQAQFAELLQ 195 (330)
Q Consensus 168 ~~i~~i~~~~D~d~dG~I~~eEF~~~~~ 195 (330)
+.+..+++.+|.|+||.|+|+||++.|.
T Consensus 121 ~e~~~mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 121 EECKEMIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred HHHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence 4799999999999999999999998874
No 14
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=99.17 E-value=4.2e-10 Score=111.06 Aligned_cols=172 Identities=13% Similarity=0.108 Sum_probs=128.9
Q ss_pred EEEeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHH-HhcCCCCCc
Q 020137 106 VSVLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILK-KHGAEGEEE 184 (330)
Q Consensus 106 i~~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~-~~D~d~dG~ 184 (330)
+.++.-|.|+++-+-=..+...+.+.|..+|.++.|+|+.+....++++... +|+| |..+-. .+..+.||.
T Consensus 444 ~~~vEeSAlk~Lrerl~s~~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~-L~LP-------Wr~L~~kla~~s~d~~ 515 (631)
T KOG0377|consen 444 MGIVEESALKELRERLRSHRSDLEDEFRKYDPKKSGKLSISHWAKCMENITG-LNLP-------WRLLRPKLANGSDDGK 515 (631)
T ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhc-CCCc-------HHHhhhhccCCCcCcc
Confidence 5677888888888777778899999999999999999999999999998853 4565 333322 234556788
Q ss_pred cCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHh
Q 020137 185 LGQAQFAELLQQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEK 264 (330)
Q Consensus 185 I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~ 264 (330)
+.|.+.+..++. +.++..++ -+-+..+-+++. -++.+|+.+|+|++|.||.+|++.+.+-
T Consensus 516 v~Y~~~~~~l~~----------e~~~~ea~------~slvetLYr~ks----~LetiF~~iD~D~SG~isldEF~~a~~l 575 (631)
T KOG0377|consen 516 VEYKSTLDNLDT----------EVILEEAG------SSLVETLYRNKS----SLETIFNIIDADNSGEISLDEFRTAWKL 575 (631)
T ss_pred eehHhHHHHhhh----------hhHHHHHH------hHHHHHHHhchh----hHHHHHHHhccCCCCceeHHHHHHHHHH
Confidence 999888876542 11111011 111234445433 2668999999999999999999999999
Q ss_pred hchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHH
Q 020137 265 NWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDI 311 (330)
Q Consensus 265 ~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ei 311 (330)
++..+..+.+.+ .+.++-+.+|.|+||.|++.||++..+-+
T Consensus 576 ~~sh~~~~i~~~------~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 576 LSSHMNGAISDD------EILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred HHhhcCCCcCHH------HHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 888776655543 68899999999999999999999887643
No 15
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.13 E-value=3.6e-10 Score=90.24 Aligned_cols=72 Identities=7% Similarity=0.093 Sum_probs=60.2
Q ss_pred HHHHHhhhcC-CCCCcccHHHHHHHHHh-hchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHHHH
Q 020137 238 IEKMLKEKKN-LEGDRMSTTIIRGFLEK-NWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDILEKF 315 (330)
Q Consensus 238 l~~aF~~~D~-D~dG~Is~~ELr~~l~~-~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil~~~ 315 (330)
+..+|+.||+ +++|+|+++||+.+|.. +|..+ +.. ..++++|+.+|.|+||.|+|+||+.+|..+.-+.
T Consensus 10 l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~l----s~~-----~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~~~ 80 (89)
T cd05022 10 LVSNFHKASVKGGKESLTASEFQELLTQQLPHLL----KDV-----EGLEEKMKNLDVNQDSKLSFEEFWELIGELAKAV 80 (89)
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhc----cCH-----HHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 5599999999 99999999999999998 76432 110 2689999999999999999999999998876655
Q ss_pred HHh
Q 020137 316 AEQ 318 (330)
Q Consensus 316 ~~q 318 (330)
-.+
T Consensus 81 ~~~ 83 (89)
T cd05022 81 KGE 83 (89)
T ss_pred HHH
Confidence 544
No 16
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.05 E-value=2.4e-10 Score=84.73 Aligned_cols=66 Identities=18% Similarity=0.444 Sum_probs=54.5
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHH
Q 020137 127 LAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELL 194 (330)
Q Consensus 127 ~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~ 194 (330)
.++++|..+|+|++|+|+.+|++.+++.++...+ +......++.+++.+|.|+||.|+++||..+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~--~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMS--DEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHST--HHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhccccc--HHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 3689999999999999999999999999975421 11111267888999999999999999999865
No 17
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=99.05 E-value=9.2e-10 Score=88.22 Aligned_cols=69 Identities=14% Similarity=0.207 Sum_probs=55.3
Q ss_pred HHHHHhhhc-CCCCC-cccHHHHHHHHHh-hchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHH
Q 020137 238 IEKMLKEKK-NLEGD-RMSTTIIRGFLEK-NWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDIL 312 (330)
Q Consensus 238 l~~aF~~~D-~D~dG-~Is~~ELr~~l~~-~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil 312 (330)
+..+|..|| +|++| +||++||+.+|.. .+..++-.+. +..++++++.+|.|+||.|+|+||+.+|..+.
T Consensus 12 ~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~------~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 12 LIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKD------PMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccC------HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 448899999 89999 5999999999977 3332222221 23699999999999999999999999998764
No 18
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=99.05 E-value=1.1e-09 Score=87.19 Aligned_cols=69 Identities=10% Similarity=0.116 Sum_probs=57.9
Q ss_pred HHHHHhhhc-CCCCC-cccHHHHHHHHHh-hchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHH
Q 020137 238 IEKMLKEKK-NLEGD-RMSTTIIRGFLEK-NWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDIL 312 (330)
Q Consensus 238 l~~aF~~~D-~D~dG-~Is~~ELr~~l~~-~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil 312 (330)
+.++|+.|| +|++| +|+.+||+.+|.. +|..++..|+. ..++++|+.+|.|++|.|+|+||+.++..+.
T Consensus 11 l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~------~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDA------DAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred HHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCH------HHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 669999997 99999 5999999999986 66555444433 2689999999999999999999999988664
No 19
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.03 E-value=1.7e-09 Score=94.97 Aligned_cols=138 Identities=17% Similarity=0.272 Sum_probs=107.9
Q ss_pred ecchhhhhhhcCCCCCCCCC---CCcchHhhHH-HhhhcccccccCCCCCchhhHHHhhhhccCCCCccccccCCCHHHH
Q 020137 9 VDGTQLRSLSHPLALPISDG---STVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHIAGSDNDVTFRIKDFDRDHA 84 (330)
Q Consensus 9 ldgs~~~~~~~~~~f~~ld~---g~~~~~e~~~-~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f 84 (330)
++-..|.++- -.|.-+|. |.|+..+|.. +.-. +-+.|.+.-..+++.+.. | .+.++-.+|
T Consensus 14 ~t~~qi~~lk--eaF~l~D~d~~G~I~~~el~~ilr~l-------g~~~s~~ei~~l~~~~d~-~------~~~idf~~F 77 (160)
T COG5126 14 LTEEQIQELK--EAFQLFDRDSDGLIDRNELGKILRSL-------GFNPSEAEINKLFEEIDA-G------NETVDFPEF 77 (160)
T ss_pred CCHHHHHHHH--HHHHHhCcCCCCCCcHHHHHHHHHHc-------CCCCcHHHHHHHHHhccC-C------CCccCHHHH
Confidence 4445555555 23666676 9999999999 5533 457778888888888875 4 478999999
Q ss_pred HHHHHHHHHHHHhHhccCCeEEEEeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCC
Q 020137 85 SRLASDYITAIADELKDDPLVVSVLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPF 164 (330)
Q Consensus 85 ~~~l~~~l~~~a~~L~~~pivi~~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~ 164 (330)
-.+++..+. + ..-+.+++.+|+.||.|+||+|+..+|+..+..+|...
T Consensus 78 l~~ms~~~~-------~--------------------~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~----- 125 (160)
T COG5126 78 LTVMSVKLK-------R--------------------GDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERL----- 125 (160)
T ss_pred HHHHHHHhc-------c--------------------CCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccC-----
Confidence 888776543 1 11456899999999999999999999999999987642
Q ss_pred CCHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Q 020137 165 SEFPQLNDILKKHGAEGEEELGQAQFAELLQ 195 (330)
Q Consensus 165 ~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~ 195 (330)
....++.+++.+|.|++|.|+|++|.+.+.
T Consensus 126 -~deev~~ll~~~d~d~dG~i~~~eF~~~~~ 155 (160)
T COG5126 126 -SDEEVEKLLKEYDEDGDGEIDYEEFKKLIK 155 (160)
T ss_pred -CHHHHHHHHHhcCCCCCceEeHHHHHHHHh
Confidence 123799999999999999999999998754
No 20
>PLN02964 phosphatidylserine decarboxylase
Probab=99.00 E-value=1.4e-09 Score=113.66 Aligned_cols=100 Identities=16% Similarity=0.199 Sum_probs=81.0
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCH-HHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEF-PQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADA 204 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~-~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~ 204 (330)
.+++++|+.+|.|+||++ +..+++.+|. ..|+++. ..++.+|+.+|.|++|.|+++||+.+|..
T Consensus 143 ~elkeaF~lfD~dgdG~i----Lg~ilrslG~---~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~-------- 207 (644)
T PLN02964 143 ESACESFDLLDPSSSNKV----VGSIFVSCSI---EDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKA-------- 207 (644)
T ss_pred HHHHHHHHHHCCCCCCcC----HHHHHHHhCC---CCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH--------
Confidence 678999999999999997 8888888863 2455431 24899999999999999999999998764
Q ss_pred HhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHh
Q 020137 205 LAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEK 264 (330)
Q Consensus 205 L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~ 264 (330)
+.. ....++ +..+|+.+|+|++|+|+.+||+.+|..
T Consensus 208 lg~-----------------------~~seEE-L~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 208 FGN-----------------------LVAANK-KEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred hcc-----------------------CCCHHH-HHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 110 012234 669999999999999999999999988
No 21
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.99 E-value=6.2e-10 Score=106.37 Aligned_cols=149 Identities=14% Similarity=0.179 Sum_probs=105.3
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADAL 205 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L 205 (330)
..=++.|..-|.|+||.++++|+..+|-== + .|..-.+++..-+..+|.|+||+|+++||+.=|.. .-
T Consensus 163 ~rDe~rFk~AD~d~dg~lt~EEF~aFLHPE--e---~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~-------~~ 230 (325)
T KOG4223|consen 163 ARDEERFKAADQDGDGSLTLEEFTAFLHPE--E---HPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYS-------HE 230 (325)
T ss_pred HHHHHHHhhcccCCCCcccHHHHHhccChh--h---cchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhh-------cc
Confidence 444678999999999999999999776311 0 12223347888999999999999999999876543 00
Q ss_pred hhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHH
Q 020137 206 AEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYD 285 (330)
Q Consensus 206 ~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~ 285 (330)
. + +.-..++.+ + .+..|...|+|+||+++.+|++.++- |...+ ....+..
T Consensus 231 ~-------------~-~~epeWv~~---E---re~F~~~~DknkDG~L~~dEl~~WI~--------P~~~d--~A~~EA~ 280 (325)
T KOG4223|consen 231 G-------------N-EEEPEWVLT---E---REQFFEFRDKNKDGKLDGDELLDWIL--------PSEQD--HAKAEAR 280 (325)
T ss_pred C-------------C-CCCcccccc---c---HHHHHHHhhcCCCCccCHHHHhcccC--------CCCcc--HHHHHHH
Confidence 0 0 001112221 1 22577778999999999999997653 32222 1234789
Q ss_pred HHHHhhcCCCCcccCHHHHHHHHHHHHHHHH
Q 020137 286 AVFADTDNSKNVVETEDEFREHVKDILEKFA 316 (330)
Q Consensus 286 ~~f~~~D~d~DG~I~~eEF~~lm~eil~~~~ 316 (330)
.++-+.|.|+||++|++|-+.----|.++.|
T Consensus 281 hL~~eaD~dkD~kLs~eEIl~~~d~FvgSqA 311 (325)
T KOG4223|consen 281 HLLHEADEDKDGKLSKEEILEHYDVFVGSQA 311 (325)
T ss_pred HHhhhhccCccccccHHHHhhCcceeeeeec
Confidence 9999999999999999998876666666554
No 22
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.99 E-value=2.3e-09 Score=85.32 Aligned_cols=65 Identities=9% Similarity=0.118 Sum_probs=55.2
Q ss_pred HHHHHhhhc-CCCCC-cccHHHHHHHHHh-----hchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 238 IEKMLKEKK-NLEGD-RMSTTIIRGFLEK-----NWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 238 l~~aF~~~D-~D~dG-~Is~~ELr~~l~~-----~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
+..+|+.+| +|++| +|+++||+.+|.. +|. ++.. ..++++++.+|.|+||.|+|+||+.++..
T Consensus 10 l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~----~~~~------~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 10 LIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEE----IKEQ------EVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcC----CCCH------HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 559999998 89999 5999999999998 542 3332 26899999999999999999999999877
Q ss_pred HH
Q 020137 311 IL 312 (330)
Q Consensus 311 il 312 (330)
+.
T Consensus 80 ~~ 81 (88)
T cd05027 80 VT 81 (88)
T ss_pred HH
Confidence 64
No 23
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.98 E-value=1.9e-09 Score=86.19 Aligned_cols=68 Identities=13% Similarity=0.131 Sum_probs=56.3
Q ss_pred HHHHHhhhcC-CC-CCcccHHHHHHHHHh-hchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHH
Q 020137 238 IEKMLKEKKN-LE-GDRMSTTIIRGFLEK-NWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDI 311 (330)
Q Consensus 238 l~~aF~~~D~-D~-dG~Is~~ELr~~l~~-~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ei 311 (330)
+..+|+.+|. |+ +|+|+.+||+.+|.. +|..+|..++.. .++.+|+.+|.|++|.|+|+||++++...
T Consensus 10 l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~------ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 10 LILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPM------AVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHH------HHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 5589999997 97 699999999999986 554445554432 68999999999999999999999988643
No 24
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.93 E-value=4e-09 Score=83.90 Aligned_cols=70 Identities=20% Similarity=0.290 Sum_probs=59.9
Q ss_pred HHHHHHHhhhhc-CCCCC-cccHHHHHHHHHh-hccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 125 AMLAENLFTDLD-TEDKG-KVCKGEISNALGH-MGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 125 ~~~~~~~F~~lD-~d~DG-~Is~~EL~~aL~~-lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
...++++|..|| .+++| +|+..|++.+|++ +|...+..|+.. .++.+++.+|.|++|.|+|+||+.++..
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~--~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDAD--AVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHH--HHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 467999999997 99999 5999999999986 775555445443 7999999999999999999999998865
No 25
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.91 E-value=3.8e-09 Score=84.61 Aligned_cols=70 Identities=17% Similarity=0.272 Sum_probs=55.4
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHh-hccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020137 126 MLAENLFTDLD-TEDKG-KVCKGEISNALGH-MGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQV 197 (330)
Q Consensus 126 ~~~~~~F~~lD-~d~DG-~Is~~EL~~aL~~-lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~i 197 (330)
..+.++|..|| .|+|| +|+..||+.+|++ ++..++..+ ....|+++++++|.|+||.|+|+||+.+|..+
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~--~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQK--DPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhccccc--CHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 35566699999 78998 5999999999987 432222222 22379999999999999999999999988763
No 26
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.90 E-value=9.7e-09 Score=81.99 Aligned_cols=67 Identities=15% Similarity=0.171 Sum_probs=57.6
Q ss_pred HHHHHHhhhhcC-CCCCcccHHHHHHHHHh-hccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020137 126 MLAENLFTDLDT-EDKGKVCKGEISNALGH-MGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQV 197 (330)
Q Consensus 126 ~~~~~~F~~lD~-d~DG~Is~~EL~~aL~~-lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~i 197 (330)
..+.++|..||. +++|+|+.+||+.+|++ +|.. .+. ...++++++.+|.|+||.|+|+||..+|.++
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~----ls~-~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHL----LKD-VEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhh----ccC-HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 468899999999 99999999999999999 7632 121 1379999999999999999999999998774
No 27
>PTZ00183 centrin; Provisional
Probab=98.89 E-value=1e-08 Score=87.32 Aligned_cols=136 Identities=12% Similarity=0.182 Sum_probs=98.6
Q ss_pred hhhhhhhcCCCCCCCCC---CCcchHhhHH-HhhhcccccccCCCCCchhhHHHhhhhccCCCCccccccCCCHHHHHHH
Q 020137 12 TQLRSLSHPLALPISDG---STVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHIAGSDNDVTFRIKDFDRDHASRL 87 (330)
Q Consensus 12 s~~~~~~~~~~f~~ld~---g~~~~~e~~~-~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~ 87 (330)
..++.+. -.|..+|. |++|..|++. +...| +.++......+++.+.. .+.+.++.++|...
T Consensus 14 ~~~~~~~--~~F~~~D~~~~G~i~~~e~~~~l~~~g-------~~~~~~~~~~l~~~~d~------~~~g~i~~~eF~~~ 78 (158)
T PTZ00183 14 DQKKEIR--EAFDLFDTDGSGTIDPKELKVAMRSLG-------FEPKKEEIKQMIADVDK------DGSGKIDFEEFLDI 78 (158)
T ss_pred HHHHHHH--HHHHHhCCCCCCcccHHHHHHHHHHhC-------CCCCHHHHHHHHHHhCC------CCCCcEeHHHHHHH
Confidence 3445555 23777776 9999999999 55443 23444444455566554 22677999999987
Q ss_pred HHHHHHHHHhHhccCCeEEEEeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCH
Q 020137 88 ASDYITAIADELKDDPLVVSVLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEF 167 (330)
Q Consensus 88 l~~~l~~~a~~L~~~pivi~~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~ 167 (330)
+.... ... .....++.+|..+|.+++|.|+..|++.++..+|. +.+ .
T Consensus 79 ~~~~~-------~~~--------------------~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~----~l~--~ 125 (158)
T PTZ00183 79 MTKKL-------GER--------------------DPREEILKAFRLFDDDKTGKISLKNLKRVAKELGE----TIT--D 125 (158)
T ss_pred HHHHh-------cCC--------------------CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC----CCC--H
Confidence 65432 110 12356899999999999999999999999998763 222 2
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHHH
Q 020137 168 PQLNDILKKHGAEGEEELGQAQFAELLQ 195 (330)
Q Consensus 168 ~~i~~i~~~~D~d~dG~I~~eEF~~~~~ 195 (330)
..+..++..+|.|++|.|++++|..+++
T Consensus 126 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 153 (158)
T PTZ00183 126 EELQEMIDEADRNGDGEISEEEFYRIMK 153 (158)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 3799999999999999999999998775
No 28
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.89 E-value=7.8e-09 Score=93.51 Aligned_cols=153 Identities=13% Similarity=0.137 Sum_probs=102.4
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhHhccCCeEEEEeechhHHHhhcChH---HHHHHHHHHhhhhcCCCCCcccHHHHHHHH
Q 020137 76 IKDFDRDHASRLASDYITAIADELKDDPLVVSVLDGNTLKLFLEDED---DFAMLAENLFTDLDTEDKGKVCKGEISNAL 152 (330)
Q Consensus 76 ~~~~~~~~f~~~l~~~l~~~a~~L~~~pivi~~~dGs~l~~fl~d~~---~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL 152 (330)
.+.+++.+..+.-+.... .-|.- +++++..+.+.+.-. +-+.-++.+|..+|+|+||.|+-.|+..++
T Consensus 20 ~t~f~~~ei~~~Yr~Fk~-------~cP~G--~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~al 90 (193)
T KOG0044|consen 20 QTKFSKKEIQQWYRGFKN-------ECPSG--RLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICAL 90 (193)
T ss_pred hcCCCHHHHHHHHHHhcc-------cCCCC--ccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 444555555554444433 34432 345555555543211 134567889999999999999999988888
Q ss_pred HhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhh
Q 020137 153 GHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADEL 232 (330)
Q Consensus 153 ~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~ 232 (330)
..+.. |-. ...++=.|+.+|.|+||.|+++|++.+++.|+..+.. ...| .++.
T Consensus 91 s~~~r--Gt~----eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~--~~~~-------------------~~~~ 143 (193)
T KOG0044|consen 91 SLTSR--GTL----EEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGS--KALP-------------------EDEE 143 (193)
T ss_pred HHHcC--CcH----HHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHccc--ccCC-------------------cccc
Confidence 87643 211 1133344999999999999999999998876544332 0000 1122
Q ss_pred hHHHHHHHHHhhhcCCCCCcccHHHHHHHHHh
Q 020137 233 QLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEK 264 (330)
Q Consensus 233 ~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~ 264 (330)
.-++....+|+.+|+|+||.||.+|+..+..+
T Consensus 144 ~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 144 TPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred cHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 33556779999999999999999999887654
No 29
>PTZ00184 calmodulin; Provisional
Probab=98.89 E-value=1.9e-08 Score=84.45 Aligned_cols=126 Identities=12% Similarity=0.248 Sum_probs=91.4
Q ss_pred CCCCCC---CCcchHhhHH-HhhhcccccccCCCCCchhhHHHhhhhccCCCCccccccCCCHHHHHHHHHHHHHHHHhH
Q 020137 23 LPISDG---STVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHIAGSDNDVTFRIKDFDRDHASRLASDYITAIADE 98 (330)
Q Consensus 23 f~~ld~---g~~~~~e~~~-~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~l~~~l~~~a~~ 98 (330)
|..+|. |.||..|+.. +..+|- ..++.....+++.+.. . +.+.++.++|...++..+..
T Consensus 17 F~~~D~~~~G~i~~~e~~~~l~~~~~-------~~~~~~~~~~~~~~d~-~-----~~g~i~~~ef~~~l~~~~~~---- 79 (149)
T PTZ00184 17 FSLFDKDGDGTITTKELGTVMRSLGQ-------NPTEAELQDMINEVDA-D-----GNGTIDFPEFLTLMARKMKD---- 79 (149)
T ss_pred HHHHcCCCCCcCCHHHHHHHHHHhCC-------CCCHHHHHHHHHhcCc-C-----CCCcCcHHHHHHHHHHhccC----
Confidence 667777 9999999999 433332 2233223334444444 2 26789999999887763210
Q ss_pred hccCCeEEEEeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhc
Q 020137 99 LKDDPLVVSVLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHG 178 (330)
Q Consensus 99 L~~~pivi~~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D 178 (330)
. .....+..+|..+|.+++|+|+..+++.+++.++. +.+. ..+..++..+|
T Consensus 80 ---~--------------------~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~----~~~~--~~~~~~~~~~d 130 (149)
T PTZ00184 80 ---T--------------------DSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE----KLTD--EEVDEMIREAD 130 (149)
T ss_pred ---C--------------------cHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC----CCCH--HHHHHHHHhcC
Confidence 0 12235789999999999999999999999998753 3332 37899999999
Q ss_pred CCCCCccCHHHHHHHH
Q 020137 179 AEGEEELGQAQFAELL 194 (330)
Q Consensus 179 ~d~dG~I~~eEF~~~~ 194 (330)
.+++|.|+++||..++
T Consensus 131 ~~~~g~i~~~ef~~~~ 146 (149)
T PTZ00184 131 VDGDGQINYEEFVKMM 146 (149)
T ss_pred CCCCCcCcHHHHHHHH
Confidence 9999999999998875
No 30
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.85 E-value=2e-08 Score=78.87 Aligned_cols=73 Identities=15% Similarity=0.113 Sum_probs=58.1
Q ss_pred HHHHHHHHHhhhcC--CCCCcccHHHHHHHHHh-hchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 234 LNGVIEKMLKEKKN--LEGDRMSTTIIRGFLEK-NWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 234 ~~~~l~~aF~~~D~--D~dG~Is~~ELr~~l~~-~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
.+. +..+|..+|+ |++|+|+.+||+.++.. +|...+.++. ...++.+++.+|.|++|.|+|+||+.++..
T Consensus 7 ~~~-l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~------~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 7 IET-IIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKD------PEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHH-HHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCC------HHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 344 6689999999 89999999999999986 4432222222 236899999999999999999999999987
Q ss_pred HHH
Q 020137 311 ILE 313 (330)
Q Consensus 311 il~ 313 (330)
..-
T Consensus 80 ~~~ 82 (88)
T cd00213 80 LAV 82 (88)
T ss_pred HHH
Confidence 644
No 31
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.84 E-value=1.8e-08 Score=80.12 Aligned_cols=72 Identities=11% Similarity=0.188 Sum_probs=56.6
Q ss_pred HHHHHHHHHhhhcC-CC-CCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHH
Q 020137 234 LNGVIEKMLKEKKN-LE-GDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDI 311 (330)
Q Consensus 234 ~~~~l~~aF~~~D~-D~-dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ei 311 (330)
...++ .+|..+|. |+ +|+|+++||+.+|.+. ..+|.+++. .+++++|+.+|.|++|.|+|+||..+|..+
T Consensus 9 ~~~~i-~~F~~y~~~~~~~g~Is~~EL~~~l~~~-~~lg~k~t~------~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 9 IGLLV-AIFHKYSGREGDKNTLSKKELKELIQKE-LTIGSKLQD------AEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHH-HHHHHHHccCCCCCEECHHHHHHHHHHH-HhcCCCCCH------HHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 34545 89999998 77 8999999999999741 012333332 368999999999999999999999998876
Q ss_pred HH
Q 020137 312 LE 313 (330)
Q Consensus 312 l~ 313 (330)
.-
T Consensus 81 ~~ 82 (88)
T cd05029 81 AL 82 (88)
T ss_pred HH
Confidence 43
No 32
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.83 E-value=1.2e-08 Score=81.08 Aligned_cols=66 Identities=14% Similarity=0.278 Sum_probs=56.5
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHh-----hccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020137 126 MLAENLFTDLD-TEDKG-KVCKGEISNALGH-----MGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQV 197 (330)
Q Consensus 126 ~~~~~~F~~lD-~d~DG-~Is~~EL~~aL~~-----lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~i 197 (330)
..++++|..|| .|+|| +|+..||+.+|++ +|. +++. ..++++++.+|.|++|.|+|+||+.++..+
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~----~~~~--~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEE----IKEQ--EVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcC----CCCH--HHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 46889999998 89999 6999999999998 553 3433 279999999999999999999999988653
No 33
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.83 E-value=9.5e-09 Score=82.12 Aligned_cols=70 Identities=11% Similarity=0.149 Sum_probs=58.9
Q ss_pred HHHHHHHhhhhcC-CC-CCcccHHHHHHHHHh-hccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 125 AMLAENLFTDLDT-ED-KGKVCKGEISNALGH-MGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 125 ~~~~~~~F~~lD~-d~-DG~Is~~EL~~aL~~-lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
...++++|..+|. |+ +|+|+..||+.+|++ +|...|.+++.+ .++.+++.+|.|++|.|+|+||+.++..
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~--ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPM--AVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHH--HHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4678999999997 97 699999999999986 544345555543 7999999999999999999999988764
No 34
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.83 E-value=2.3e-08 Score=80.09 Aligned_cols=76 Identities=18% Similarity=0.290 Sum_probs=61.6
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDILEKFAE 317 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil~~~~~ 317 (330)
+..+|+.+|+|++|+|+.+|++.+|... |++. .+++++|+.+|.+++|.|+|+||+.++..+ +.
T Consensus 12 l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~~--------~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~----~~ 75 (96)
T smart00027 12 YEQIFRSLDKNQDGTVTGAQAKPILLKS----GLPQ--------TLLAKIWNLADIDNDGELDKDEFALAMHLI----YR 75 (96)
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCCH--------HHHHHHHHHhcCCCCCCcCHHHHHHHHHHH----HH
Confidence 6699999999999999999999999875 3322 258999999999999999999999777654 44
Q ss_pred hhcCCCeeeecC
Q 020137 318 QLDANPVYHDFE 329 (330)
Q Consensus 318 ql~~~pi~~~~~ 329 (330)
-..|.||...++
T Consensus 76 ~~~g~~~~~~~~ 87 (96)
T smart00027 76 KLNGYPIPASLP 87 (96)
T ss_pred HHcCCCCCccCC
Confidence 444777766543
No 35
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.80 E-value=2.4e-08 Score=79.64 Aligned_cols=69 Identities=10% Similarity=0.126 Sum_probs=54.6
Q ss_pred HHHHHhh-hcCCCCC-cccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHH
Q 020137 238 IEKMLKE-KKNLEGD-RMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDI 311 (330)
Q Consensus 238 l~~aF~~-~D~D~dG-~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ei 311 (330)
+..+|+. +|+||+| +||++||+.++.+..+...-.... +.+++++++.+|.|+||.|+|+||+++|..+
T Consensus 11 l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~-----~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 11 LIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKD-----PGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCC-----HHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 4589999 8899986 999999999998864321100111 2368999999999999999999999998876
No 36
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=98.80 E-value=3.4e-08 Score=85.19 Aligned_cols=105 Identities=16% Similarity=0.193 Sum_probs=83.8
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCC
Q 020137 169 QLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNL 248 (330)
Q Consensus 169 ~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D 248 (330)
.-+.|.+.+-.||.|.++|+.|+.++.- +..+|.+ .++ +.-||+.+|-|
T Consensus 72 fk~ri~e~FSeDG~GnlsfddFlDmfSV-~sE~APr----------------------------dlK--~~YAFkIYDfd 120 (189)
T KOG0038|consen 72 FKRRICEVFSEDGRGNLSFDDFLDMFSV-FSEMAPR----------------------------DLK--AKYAFKIYDFD 120 (189)
T ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHH-HHhhChH----------------------------Hhh--hhheeEEeecC
Confidence 4466778889999999999999997753 3333321 122 44799999999
Q ss_pred CCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHH
Q 020137 249 EGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 249 ~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
+|++|...+|...+.++... ++. .+++..+++.++.++|.||||.+++.||-.++.
T Consensus 121 ~D~~i~~~DL~~~l~~lTr~-eLs----~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~ 176 (189)
T KOG0038|consen 121 GDEFIGHDDLEKTLTSLTRD-ELS----DEEVELICEKVIEEADLDGDGKLSFAEFEHVIL 176 (189)
T ss_pred CCCcccHHHHHHHHHHHhhc-cCC----HHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Confidence 99999999999999988653 332 267788999999999999999999999988775
No 37
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.78 E-value=3.1e-08 Score=72.82 Aligned_cols=63 Identities=19% Similarity=0.217 Sum_probs=54.1
Q ss_pred HHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHH
Q 020137 239 EKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDILE 313 (330)
Q Consensus 239 ~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil~ 313 (330)
+.+|+.+|+|++|+|+.+|++.++...| ++. ..+..+|+.+|.+++|.|+|+||+.++.-+.-
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g----~~~--------~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~~~ 64 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG----LPR--------SVLAQIWDLADTDKDGKLDKEEFAIAMHLIAL 64 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC----CCH--------HHHHHHHHHhcCCCCCcCCHHHHHHHHHHHHH
Confidence 3689999999999999999999998764 321 25899999999999999999999999877654
No 38
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.75 E-value=8e-08 Score=92.09 Aligned_cols=150 Identities=10% Similarity=0.085 Sum_probs=102.5
Q ss_pred HHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHH---HHHHHHHHhcCCCCCccCHHHHHHHHHHHHHH
Q 020137 124 FAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFP---QLNDILKKHGAEGEEELGQAQFAELLQQVLQD 200 (330)
Q Consensus 124 ~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~---~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~ 200 (330)
-...+..+|..+|.++||.++.+||+.-+.+... .+ ....-+..+|.|.||.|+++|++..+-..
T Consensus 75 ~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k---------~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~--- 142 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSDSDGFVTESELKAWIMQSQK---------KYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGR--- 142 (325)
T ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHH---------HHHHHHHHHHHHHhccCccceeeHHHhhhhhhhc---
Confidence 4568999999999999999999999987766532 12 23445778899999999999998865420
Q ss_pred HHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHH
Q 020137 201 IADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAV 280 (330)
Q Consensus 201 ~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~ 280 (330)
...|-...+.++ +..-++++. . -+.-|+..|.|+||.++.+|+-.+|.=- + -|...
T Consensus 143 -----~~~~~~~~d~e~---~~~~~km~~------r-De~rFk~AD~d~dg~lt~EEF~aFLHPE--e--~p~M~----- 198 (325)
T KOG4223|consen 143 -----VDLPDEFPDEED---NEEYKKMIA------R-DEERFKAADQDGDGSLTLEEFTAFLHPE--E--HPHMK----- 198 (325)
T ss_pred -----ccCccccccchh---cHHHHHHHH------H-HHHHHhhcccCCCCcccHHHHHhccChh--h--cchHH-----
Confidence 000100011111 111111111 1 3478999999999999999999887421 0 11111
Q ss_pred HHHHHHHHHhhcCCCCcccCHHHHHHHHH
Q 020137 281 VLLYDAVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 281 ~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
.=+|.+-+..+|.|+||.|+++||+.=|.
T Consensus 199 ~iVi~Etl~d~Dkn~DG~I~~eEfigd~~ 227 (325)
T KOG4223|consen 199 DIVIAETLEDIDKNGDGKISLEEFIGDLY 227 (325)
T ss_pred HHHHHHHHhhcccCCCCceeHHHHHhHHh
Confidence 12678999999999999999999987654
No 39
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.73 E-value=2.1e-07 Score=84.93 Aligned_cols=146 Identities=13% Similarity=0.171 Sum_probs=109.3
Q ss_pred CCCCCCCC---CCcchHhhHH-HhhhcccccccCCCCCchhhHHHhhhhccCCCCccccccCCCHHHHHHHHHHHHHHHH
Q 020137 21 LALPISDG---STVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHIAGSDNDVTFRIKDFDRDHASRLASDYITAIA 96 (330)
Q Consensus 21 ~~f~~ld~---g~~~~~e~~~-~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~l~~~l~~~a 96 (330)
..|...|+ |+|+-+||+. +...+= =+..+----.+++=|.. .. ...++..||+++-.-|
T Consensus 61 ~~f~~vD~d~sg~i~~~eLq~aLsn~~~------~~Fs~~TcrlmI~mfd~-~~-----~G~i~f~EF~~Lw~~i----- 123 (221)
T KOG0037|consen 61 GWFQSVDRDRSGRILAKELQQALSNGTW------SPFSIETCRLMISMFDR-DN-----SGTIGFKEFKALWKYI----- 123 (221)
T ss_pred HHHHhhCccccccccHHHHHHHhhcCCC------CCCCHHHHHHHHHHhcC-CC-----CCccCHHHHHHHHHHH-----
Confidence 45777787 9999999999 543333 11112112235566665 33 6779999999876432
Q ss_pred hHhccCCeEEEEeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 020137 97 DELKDDPLVVSVLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKK 176 (330)
Q Consensus 97 ~~L~~~pivi~~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~ 176 (330)
..-+++|..+|+|++|+|+..||+.||..+|.. ++|. .++-|+++
T Consensus 124 -----------------------------~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~--Lspq----~~~~lv~k 168 (221)
T KOG0037|consen 124 -----------------------------NQWRNVFRTYDRDRSGTIDSSELRQALTQLGYR--LSPQ----FYNLLVRK 168 (221)
T ss_pred -----------------------------HHHHHHHHhcccCCCCcccHHHHHHHHHHcCcC--CCHH----HHHHHHHH
Confidence 245789999999999999999999999999864 3432 78899999
Q ss_pred hcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHH
Q 020137 177 HGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTT 256 (330)
Q Consensus 177 ~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ 256 (330)
+|.-++|.|.|++|++.+-. +.. +-++|+..|++.+|.|+..
T Consensus 169 yd~~~~g~i~FD~FI~ccv~-------------------------------------L~~-lt~~Fr~~D~~q~G~i~~~ 210 (221)
T KOG0037|consen 169 YDRFGGGRIDFDDFIQCCVV-------------------------------------LQR-LTEAFRRRDTAQQGSITIS 210 (221)
T ss_pred hccccCCceeHHHHHHHHHH-------------------------------------HHH-HHHHHHHhccccceeEEEe
Confidence 99888999999999987643 122 4489999999999998764
No 40
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.71 E-value=4.7e-08 Score=77.76 Aligned_cols=68 Identities=13% Similarity=0.283 Sum_probs=55.6
Q ss_pred HHHHHhhhhcC-CC-CCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020137 127 LAENLFTDLDT-ED-KGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQV 197 (330)
Q Consensus 127 ~~~~~F~~lD~-d~-DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~i 197 (330)
.+.++|..||. || +|+|+.+||+.+|++.- .+|.+++. ..++++++.+|.|++|.|+|+||+.++.++
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~-~lg~k~t~--~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKEL-TIGSKLQD--AEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHH-hcCCCCCH--HHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 46789999998 77 89999999999997520 12444443 389999999999999999999999988764
No 41
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.69 E-value=8.3e-08 Score=70.53 Aligned_cols=62 Identities=23% Similarity=0.432 Sum_probs=53.9
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020137 128 AENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQV 197 (330)
Q Consensus 128 ~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~i 197 (330)
++++|..+|+|++|.|+.+|++.+++++| .+ .+.+..+++.+|.+++|.|+++||+.++..+
T Consensus 1 ~~~~F~~~D~~~~G~i~~~el~~~l~~~g----~~----~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 1 YDQIFRSLDPDGDGLISGDEARPFLGKSG----LP----RSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred ChHHHHHhCCCCCCcCcHHHHHHHHHHcC----CC----HHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 36799999999999999999999999874 32 2368999999999999999999999987653
No 42
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.67 E-value=8.4e-08 Score=75.32 Aligned_cols=69 Identities=16% Similarity=0.208 Sum_probs=56.8
Q ss_pred HHHHHHhhhhcC--CCCCcccHHHHHHHHHh-hccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 126 MLAENLFTDLDT--EDKGKVCKGEISNALGH-MGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 126 ~~~~~~F~~lD~--d~DG~Is~~EL~~aL~~-lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
..++++|..+|+ |++|+|+.++++.++++ +|...+.+++. ..++.++..+|.+++|.|+|++|+.++..
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~--~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDP--EAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCH--HHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 458889999999 89999999999999986 55322222222 37999999999999999999999998865
No 43
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.64 E-value=6.1e-08 Score=69.22 Aligned_cols=52 Identities=21% Similarity=0.173 Sum_probs=44.2
Q ss_pred CCCcccHHHHHHHHHhhchhcCCC-CCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 249 EGDRMSTTIIRGFLEKNWKDIGLP-PSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 249 ~dG~Is~~ELr~~l~~~g~~~glp-~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
++|+|++++|+.+|..+|. + ++. .+++.+|+.+|.|++|.|+|+||+.+|+.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~----~~~s~------~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGI----KDLSE------EEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTS----SSSCH------HHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCC----CCCCH------HHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 4799999999999977653 3 332 26999999999999999999999999874
No 44
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=98.63 E-value=3.8e-07 Score=82.33 Aligned_cols=112 Identities=19% Similarity=0.305 Sum_probs=87.0
Q ss_pred HHHHHHHHhhhhcCCCCCc-ccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHH
Q 020137 124 FAMLAENLFTDLDTEDKGK-VCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIA 202 (330)
Q Consensus 124 ~~~~~~~~F~~lD~d~DG~-Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a 202 (330)
.++...++|+.+|++++|. |+.+++...+.... |+......+.-.|+-+|.+++|.|+.+|+...+..++..
T Consensus 64 ~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~-----~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~-- 136 (187)
T KOG0034|consen 64 LNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFS-----PKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGE-- 136 (187)
T ss_pred cCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhc-----CCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHcc--
Confidence 4456788999999999998 99999888887763 444433367889999999999999999999988764221
Q ss_pred HHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhh
Q 020137 203 DALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKN 265 (330)
Q Consensus 203 ~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~ 265 (330)
+... .......+++.+|..+|.|+||+||.+|++.++.+.
T Consensus 137 --------------------~~~~---~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 137 --------------------NDDM---SDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred --------------------CCcc---hHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 0000 123446778899999999999999999999998874
No 45
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.56 E-value=2.1e-07 Score=74.58 Aligned_cols=65 Identities=23% Similarity=0.335 Sum_probs=56.7
Q ss_pred HHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 124 FAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 124 ~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
-...++++|..+|.|++|.|+.++++.+|+.++ ++. ..++.++..+|.+++|.|+|+||+.++..
T Consensus 8 ~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~----~~~----~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 8 DKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG----LPQ----TLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC----CCH----HHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 346899999999999999999999999999864 322 26899999999999999999999998765
No 46
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.53 E-value=3.1e-07 Score=64.49 Aligned_cols=61 Identities=15% Similarity=0.109 Sum_probs=51.9
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHV 308 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm 308 (330)
+..+|+.+|.|++|.|+.++++.++..++. ++.. ..+..+|+.+|.+++|.|+++||..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~----~~~~------~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGE----GLSE------EEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCC----CCCH------HHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 347899999999999999999999998752 3332 367889999999999999999998765
No 47
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.51 E-value=2.6e-07 Score=77.26 Aligned_cols=57 Identities=14% Similarity=0.073 Sum_probs=48.8
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHV 308 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm 308 (330)
+.-+|..+|+|+||+||.+||+.+. ++ +. ...+..+|+.+|.|+||.|+++||...+
T Consensus 50 l~w~F~~lD~d~DG~Ls~~EL~~~~--l~------~~------e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 50 VGWMFNQLDGNYDGKLSHHELAPIR--LD------PN------EHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHH--cc------ch------HHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 6689999999999999999999775 22 11 1257899999999999999999999887
No 48
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.50 E-value=6.3e-07 Score=71.43 Aligned_cols=71 Identities=13% Similarity=0.169 Sum_probs=55.5
Q ss_pred HHHHHHhhh-hcCCCCC-cccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020137 126 MLAENLFTD-LDTEDKG-KVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQV 197 (330)
Q Consensus 126 ~~~~~~F~~-lD~d~DG-~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~i 197 (330)
..+..+|.. +|.+++| +|+++||+.++.+....+. ....+...|+++++.+|.|+||.|+|+||+.+|..+
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~-~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFT-KNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhh-cCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 457889999 7888887 9999999999998632111 011122379999999999999999999999988763
No 49
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.47 E-value=6.5e-06 Score=81.83 Aligned_cols=206 Identities=14% Similarity=0.168 Sum_probs=139.3
Q ss_pred CCCCCCC---CCcchHhhHHHhhhcccccccCCCCCchh-----h----HHHhhhhccCCCCccccccCCCHHHHHHHHH
Q 020137 22 ALPISDG---STVTGAQLLDFAENEASSSLFGLSLPQNL-----K----STALKHIAGSDNDVTFRIKDFDRDHASRLAS 89 (330)
Q Consensus 22 ~f~~ld~---g~~~~~e~~~~~~~~~~~~~~~~~~p~~~-----~----~~~l~~~~~~~~~~~~~~~~~~~~~f~~~l~ 89 (330)
.|.=+|. |.+...|+-.|+.+=.|+.=.+++.-+|+ | ...|-...= |+ .+++.|+-++|.+-..
T Consensus 238 AFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFF-G~---rg~~kLs~deF~~F~e 313 (489)
T KOG2643|consen 238 AFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFF-GK---RGNGKLSIDEFLKFQE 313 (489)
T ss_pred eeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhh-cc---CCCccccHHHHHHHHH
Confidence 3444444 99999999999988888888888777662 1 112222223 44 3467777777654332
Q ss_pred HHHHHHHhHhccCCeEEEEeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHH
Q 020137 90 DYITAIADELKDDPLVVSVLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQ 169 (330)
Q Consensus 90 ~~l~~~a~~L~~~pivi~~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~ 169 (330)
.. + +..++-=|..+|....|.|+..++...|-.... .+...-...
T Consensus 314 ~L------------------------------q--~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~---~n~~~k~~~ 358 (489)
T KOG2643|consen 314 NL------------------------------Q--EEILELEFERFDKGDSGAISEVDFAELLLAYAG---VNSKKKHKY 358 (489)
T ss_pred HH------------------------------H--HHHHHHHHHHhCcccccccCHHHHHHHHHHHcc---cchHhHHHH
Confidence 21 1 223444588999998999999999998887752 232221125
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCC
Q 020137 170 LNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLE 249 (330)
Q Consensus 170 i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~ 249 (330)
+.++-++++.+ +..||++||.+.++= +++-...+-.+ ..|. ..
T Consensus 359 lkrvk~kf~~~-~~gISl~Ef~~Ff~F-------------------------------l~~l~dfd~Al-~fy~----~A 401 (489)
T KOG2643|consen 359 LKRVKEKFKDD-GKGISLQEFKAFFRF-------------------------------LNNLNDFDIAL-RFYH----MA 401 (489)
T ss_pred HHHHHHhccCC-CCCcCHHHHHHHHHH-------------------------------HhhhhHHHHHH-HHHH----Hc
Confidence 78888888877 567999999987642 12211122212 2332 24
Q ss_pred CCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHH
Q 020137 250 GDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDIL 312 (330)
Q Consensus 250 dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil 312 (330)
++.|+..+++++-..+. |.+.+. .+++-+|.-+|.|+||.++++||+..|+.-+
T Consensus 402 g~~i~~~~f~raa~~vt---GveLSd------hVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~Rm 455 (489)
T KOG2643|consen 402 GASIDEKTFQRAAKVVT---GVELSD------HVVDVVFTIFDENNDGTLSHKEFLAVMKRRM 455 (489)
T ss_pred CCCCCHHHHHHHHHHhc---Cccccc------ceeeeEEEEEccCCCCcccHHHHHHHHHHHh
Confidence 68899999999887763 555442 3789999999999999999999999998754
No 50
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.46 E-value=6.9e-07 Score=70.82 Aligned_cols=73 Identities=15% Similarity=0.149 Sum_probs=54.9
Q ss_pred HHHHHHHHHhhhcCC--CCCcccHHHHHHHHHh-hchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 234 LNGVIEKMLKEKKNL--EGDRMSTTIIRGFLEK-NWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 234 ~~~~l~~aF~~~D~D--~dG~Is~~ELr~~l~~-~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
...++ ..|..++.. ++|+|+++||+.+|.+ ++..+ +... .+..++.+|+.+|.|++|.|+|+||++++..
T Consensus 7 i~~~~-~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~--t~~~----~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 7 IETII-NVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFL--KKEK----NQKAIDKIFEDLDTNQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHH-HHHHHHhccCCCcccCCHHHHHHHHHHHhhHhh--ccCC----CHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 34434 889999865 5899999999999974 33211 1000 1236999999999999999999999999987
Q ss_pred HHH
Q 020137 311 ILE 313 (330)
Q Consensus 311 il~ 313 (330)
+.-
T Consensus 80 ~~~ 82 (88)
T cd05030 80 VGV 82 (88)
T ss_pred HHH
Confidence 643
No 51
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.41 E-value=8.4e-07 Score=62.24 Aligned_cols=61 Identities=18% Similarity=0.439 Sum_probs=52.8
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHH
Q 020137 128 AENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELL 194 (330)
Q Consensus 128 ~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~ 194 (330)
+..+|..+|.+++|.|+.++++.+++.++ .+++. ..+..+++.+|.+++|.|+++||..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~----~~~~~--~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG----EGLSE--EEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC----CCCCH--HHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 57889999999999999999999999986 23333 378899999999999999999998654
No 52
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.37 E-value=4.1e-06 Score=70.09 Aligned_cols=63 Identities=11% Similarity=0.198 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHH
Q 020137 122 DDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELL 194 (330)
Q Consensus 122 ~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~ 194 (330)
......+.-+|..+|+|+||+|+++||..+. ++ |+ + ..+..+++.+|.|+||.||++||...+
T Consensus 44 ~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~-----~~-e--~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 44 PMCKDPVGWMFNQLDGNYDGKLSHHELAPIR--LD-----PN-E--HCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH--cc-----ch-H--HHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 3377889999999999999999999999765 22 22 2 268899999999999999999998865
No 53
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.36 E-value=7.7e-07 Score=63.45 Aligned_cols=52 Identities=17% Similarity=0.484 Sum_probs=44.4
Q ss_pred CCCcccHHHHHHHHHhhccccCCC-CCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 139 DKGKVCKGEISNALGHMGVELGVP-PFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 139 ~DG~Is~~EL~~aL~~lg~~~G~p-p~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
++|.|+.++|+.+|+.+|. + ++. .+++.++..+|.|++|.|+|+||+.++++
T Consensus 1 ~~G~i~~~~~~~~l~~~g~----~~~s~--~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGI----KDLSE--EEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTS----SSSCH--HHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCC----CCCCH--HHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 4799999999999987754 4 333 37999999999999999999999998754
No 54
>PLN02964 phosphatidylserine decarboxylase
Probab=98.24 E-value=6.2e-06 Score=86.69 Aligned_cols=185 Identities=10% Similarity=0.055 Sum_probs=111.9
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHhHhccCCeEEEEeechh-----HHHhhcChHHHHH-----------HHHHHhhhhcC
Q 020137 74 FRIKDFDRDHASRLASDYITAIADELKDDPLVVSVLDGNT-----LKLFLEDEDDFAM-----------LAENLFTDLDT 137 (330)
Q Consensus 74 ~~~~~~~~~~f~~~l~~~l~~~a~~L~~~pivi~~~dGs~-----l~~fl~d~~~~~~-----------~~~~~F~~lD~ 137 (330)
..+.-|+.+.|+-+.+--|-.---.+| +|.-+.+.=|+. .++==.+|- |+. .+ .-|+.+|+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~f~t~~~~~~~~p~-~~~~~~~~~~~~~~~~-~~~~~~~~ 118 (644)
T PLN02964 42 VSQRAVSAEDFSGIALLTLVGAEMKFK-DKWLACVSFGEQTFRTETSDSTDKPV-WNSEKKLLLEKNGPHL-ARISVFET 118 (644)
T ss_pred ccccceecccccCeEEEEeehhhhccC-CcEEEEEEecceeeeeccccccCCcc-cchhhceEeccCCcce-EEEEEEec
Confidence 336778888887665543322223344 554443333432 111111121 221 22 26788887
Q ss_pred CCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHhh
Q 020137 138 EDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALA-EKHIIIIQNI 216 (330)
Q Consensus 138 d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~-~~pv~v~~~~ 216 (330)
+ +++++++.... .+... .+ ...+...+.+.|..+|.|++|.+ +...++. +. ..|
T Consensus 119 ~---~~s~n~lv~~~-e~~~t-~f-~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrs--------lG~~~p------- 173 (644)
T PLN02964 119 N---RLSKNTLVGYC-ELDLF-DF-VTQEPESACESFDLLDPSSSNKV----VGSIFVS--------CSIEDP------- 173 (644)
T ss_pred C---CCCHHHhhhhe-eecHh-hc-cHHHHHHHHHHHHHHCCCCCCcC----HHHHHHH--------hCCCCC-------
Confidence 6 56777776322 22000 00 01111257888999999999996 2222221 11 111
Q ss_pred hhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCC
Q 020137 217 KIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKN 296 (330)
Q Consensus 217 ~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~D 296 (330)
.......++.+|+.+|.|++|.|+.+|+..++..++. .+.. .++.++|+.+|.|++
T Consensus 174 --------------te~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~----~~se------EEL~eaFk~fDkDgd 229 (644)
T PLN02964 174 --------------VETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN----LVAA------NKKEELFKAADLNGD 229 (644)
T ss_pred --------------CHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc----CCCH------HHHHHHHHHhCCCCC
Confidence 1122234779999999999999999999999987753 1221 269999999999999
Q ss_pred cccCHHHHHHHHHH
Q 020137 297 VVETEDEFREHVKD 310 (330)
Q Consensus 297 G~I~~eEF~~lm~e 310 (330)
|.|+++||+++|+.
T Consensus 230 G~Is~dEL~~vL~~ 243 (644)
T PLN02964 230 GVVTIDELAALLAL 243 (644)
T ss_pred CcCCHHHHHHHHHh
Confidence 99999999999887
No 55
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.23 E-value=5.2e-06 Score=75.15 Aligned_cols=113 Identities=16% Similarity=0.207 Sum_probs=84.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhHhccCCeEEEEeechhHHHhhcChHHHH----HHHHHHhhhhcCCCCCcccHHHHHHHHH
Q 020137 78 DFDRDHASRLASDYITAIADELKDDPLVVSVLDGNTLKLFLEDEDDFA----MLAENLFTDLDTEDKGKVCKGEISNALG 153 (330)
Q Consensus 78 ~~~~~~f~~~l~~~l~~~a~~L~~~pivi~~~dGs~l~~fl~d~~~~~----~~~~~~F~~lD~d~DG~Is~~EL~~aL~ 153 (330)
...-....+.|...|....+-....|+.+-.=+|..+-..-..=..|+ ..+..+|.++|.+.||+|+..||+.+|+
T Consensus 47 ~~~~~s~~~el~~~l~rr~~ines~~~~~~~r~s~kv~n~yteF~eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmE 126 (244)
T KOG0041|consen 47 QAQEASADQELSANLIRRDDINESQGAGVPSRDSLKVFNVYTEFSEFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMME 126 (244)
T ss_pred HhhhcchHHHHHHHHHHHHHHhhccccCCcccccccccchhhhhhHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHH
Confidence 333334556677777777777778888777777744433222222343 4678899999999999999999999999
Q ss_pred hhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 154 HMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 154 ~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
+||. |.+- --+.++++++|.|.||+|+|-||+-.+++
T Consensus 127 KLga----pQTH--L~lK~mikeVded~dgklSfreflLIfrk 163 (244)
T KOG0041|consen 127 KLGA----PQTH--LGLKNMIKEVDEDFDGKLSFREFLLIFRK 163 (244)
T ss_pred HhCC----chhh--HHHHHHHHHhhcccccchhHHHHHHHHHH
Confidence 9963 4332 25899999999999999999999988876
No 56
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.20 E-value=4e-06 Score=66.45 Aligned_cols=69 Identities=12% Similarity=0.167 Sum_probs=53.5
Q ss_pred HHHHHHhhhhcCC--CCCcccHHHHHHHHHh-hccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 126 MLAENLFTDLDTE--DKGKVCKGEISNALGH-MGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 126 ~~~~~~F~~lD~d--~DG~Is~~EL~~aL~~-lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
..+...|..++.. ++|+|+.+||+.+|.+ ++.. ++.......|+.+++.+|.|++|.|+|+||+.++..
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~--~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNF--LKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHh--hccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 3567889999977 4789999999999974 3321 111112237999999999999999999999998865
No 57
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.17 E-value=5.3e-06 Score=72.63 Aligned_cols=122 Identities=11% Similarity=0.183 Sum_probs=85.3
Q ss_pred CCcchHhhHH-HhhhcccccccCCCCCchhhHHHhhhhccCCCCccccccCCCHHHHHHHHHHHHHHHHhHhccCCeEEE
Q 020137 29 STVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHIAGSDNDVTFRIKDFDRDHASRLASDYITAIADELKDDPLVVS 107 (330)
Q Consensus 29 g~~~~~e~~~-~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~l~~~l~~~a~~L~~~pivi~ 107 (330)
|++-+.||.- .-+.|- . .+..---.++.++.. ++...++.+.|.++....+. +
T Consensus 48 g~iD~~EL~vAmralGF-----E--~~k~ei~kll~d~dk------~~~g~i~fe~f~~~mt~k~~------e------- 101 (172)
T KOG0028|consen 48 GKIDVEELKVAMRALGF-----E--PKKEEILKLLADVDK------EGSGKITFEDFRRVMTVKLG------E------- 101 (172)
T ss_pred CcccHHHHHHHHHHcCC-----C--cchHHHHHHHHhhhh------ccCceechHHHHHHHHHHHh------c-------
Confidence 6777777754 444443 1 011111124444443 33567788888777665542 1
Q ss_pred EeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCH
Q 020137 108 VLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQ 187 (330)
Q Consensus 108 ~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~ 187 (330)
.|+ ..++..+|..+|-|++|+||..+|+..+..||.. -....+.+++.++|.|+||.|..
T Consensus 102 -----------~dt---~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgen------ltD~El~eMIeEAd~d~dgevne 161 (172)
T KOG0028|consen 102 -----------RDT---KEEIKKAFRLFDDDKTGKISQRNLKRVAKELGEN------LTDEELMEMIEEADRDGDGEVNE 161 (172)
T ss_pred -----------cCc---HHHHHHHHHcccccCCCCcCHHHHHHHHHHhCcc------ccHHHHHHHHHHhcccccccccH
Confidence 221 3489999999999999999999999999999742 22347999999999999999999
Q ss_pred HHHHHHHHH
Q 020137 188 AQFAELLQQ 196 (330)
Q Consensus 188 eEF~~~~~~ 196 (330)
+||..+|++
T Consensus 162 eEF~~imk~ 170 (172)
T KOG0028|consen 162 EEFIRIMKK 170 (172)
T ss_pred HHHHHHHhc
Confidence 999998864
No 58
>PF14658 EF-hand_9: EF-hand domain
Probab=98.11 E-value=5.8e-06 Score=62.38 Aligned_cols=63 Identities=13% Similarity=0.125 Sum_probs=54.5
Q ss_pred HHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCC-cccCHHHHHHHHHHH
Q 020137 240 KMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKN-VVETEDEFREHVKDI 311 (330)
Q Consensus 240 ~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~D-G~I~~eEF~~lm~ei 311 (330)
.+|..||.++.|.|....|+.+|+.++-. .|.+ ..++++.+++|+++. |.|+++.|+..|++-
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~---~p~e------~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~w 65 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGR---SPEE------SELQDLINELDPEGRDGSVNFDTFLAIMRDW 65 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCC---CCcH------HHHHHHHHHhCCCCCCceEeHHHHHHHHHHh
Confidence 58999999999999999999999998731 2332 369999999999999 999999999999863
No 59
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=98.10 E-value=2.7e-05 Score=86.21 Aligned_cols=139 Identities=13% Similarity=0.201 Sum_probs=99.8
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCC-CCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVP-PFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADA 204 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~p-p~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~ 204 (330)
.++.-+|+.||.+++|.++..+++.||+.+|.++.+- ...+.+.+..++..+|++.+|.|+..+|.++|-. .
T Consensus 2253 ~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~-------~ 2325 (2399)
T KOG0040|consen 2253 KEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMIS-------K 2325 (2399)
T ss_pred HHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHh-------c
Confidence 5677899999999999999999999999999876321 1222337999999999999999999999999843 0
Q ss_pred HhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHH
Q 020137 205 LAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLY 284 (330)
Q Consensus 205 L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i 284 (330)
-|+||.+ + .-++.||+.+|. +.-++++.++...| || ++.+--+
T Consensus 2326 ---------ETeNI~s---------~-----~eIE~AfraL~a-~~~yvtke~~~~~l---------tr----eqaefc~ 2368 (2399)
T KOG0040|consen 2326 ---------ETENILS---------S-----EEIEDAFRALDA-GKPYVTKEELYQNL---------TR----EQAEFCM 2368 (2399)
T ss_pred ---------ccccccc---------h-----HHHHHHHHHhhc-CCccccHHHHHhcC---------CH----HHHHHHH
Confidence 2344443 2 237799999999 78899999886443 33 2222234
Q ss_pred HHHHHhhcCC----CCcccCHHHHHHHH
Q 020137 285 DAVFADTDNS----KNVVETEDEFREHV 308 (330)
Q Consensus 285 ~~~f~~~D~d----~DG~I~~eEF~~lm 308 (330)
..|-+.+|+- .-+.++|.+|.+-+
T Consensus 2369 s~m~~~~e~~~~~s~q~~l~y~dfv~sl 2396 (2399)
T KOG0040|consen 2369 SKMKPYAETSSGRSDQVALDYKDFVNSL 2396 (2399)
T ss_pred HHhhhhcccccCCCccccccHHHHHHHH
Confidence 4454555653 33567888886643
No 60
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=98.10 E-value=1.6e-05 Score=79.33 Aligned_cols=155 Identities=17% Similarity=0.262 Sum_probs=105.8
Q ss_pred Eecchhhhhhh-----------cCCCCCCCCC---CCcchHhhHHHhhhcccccccCCCCCchhhHHHhhhhccCCCCcc
Q 020137 8 VVDGTQLRSLS-----------HPLALPISDG---STVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHIAGSDNDVT 73 (330)
Q Consensus 8 vldgs~~~~~~-----------~~~~f~~ld~---g~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~ 73 (330)
++--|.|++|- .+ |+..|. |+||.++--...+.-- +||||=-...+-|-..+.+|. +
T Consensus 446 ~vEeSAlk~Lrerl~s~~sdL~~e--F~~~D~~ksG~lsis~Wa~~mE~i~-----~L~LPWr~L~~kla~~s~d~~-v- 516 (631)
T KOG0377|consen 446 IVEESALKELRERLRSHRSDLEDE--FRKYDPKKSGKLSISHWAKCMENIT-----GLNLPWRLLRPKLANGSDDGK-V- 516 (631)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHH--HHhcChhhcCeeeHHHHHHHHHHHh-----cCCCcHHHhhhhccCCCcCcc-e-
Confidence 56667777765 34 666676 9999999888666666 999997666665555554232 1
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHhHhccCCeEEEEeechhHHHhh-cChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHH
Q 020137 74 FRIKDFDRDHASRLASDYITAIADELKDDPLVVSVLDGNTLKLFL-EDEDDFAMLAENLFTDLDTEDKGKVCKGEISNAL 152 (330)
Q Consensus 74 ~~~~~~~~~~f~~~l~~~l~~~a~~L~~~pivi~~~dGs~l~~fl-~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL 152 (330)
-=++.+.-+=-+.+.+=| |++|.+=| .+ ...++.+|..+|+|++|.||.+|++.+.
T Consensus 517 -----~Y~~~~~~l~~e~~~~ea--------------~~slvetLYr~----ks~LetiF~~iD~D~SG~isldEF~~a~ 573 (631)
T KOG0377|consen 517 -----EYKSTLDNLDTEVILEEA--------------GSSLVETLYRN----KSSLETIFNIIDADNSGEISLDEFRTAW 573 (631)
T ss_pred -----ehHhHHHHhhhhhHHHHH--------------HhHHHHHHHhc----hhhHHHHHHHhccCCCCceeHHHHHHHH
Confidence 112222111111111100 34443322 22 3578899999999999999999999999
Q ss_pred HhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 153 GHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 153 ~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
+-++..+..+-+. ..+.++-+.+|-|+||.|++.||++.++-
T Consensus 574 ~l~~sh~~~~i~~--~~i~~la~~mD~NkDG~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 574 KLLSSHMNGAISD--DEILELARSMDLNKDGKIDLNEFLEAFRL 615 (631)
T ss_pred HHHHhhcCCCcCH--HHHHHHHHhhccCCCCcccHHHHHHHHhh
Confidence 9988765544443 38899999999999999999999998863
No 61
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.07 E-value=3.7e-06 Score=53.36 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=25.8
Q ss_pred HHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 283 LYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 283 ~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
++.++|+.+|.|+||.|+++||+.+|++
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 3688999999999999999999999875
No 62
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.07 E-value=1.6e-05 Score=72.03 Aligned_cols=64 Identities=16% Similarity=0.147 Sum_probs=54.8
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDI 311 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ei 311 (330)
...+|+.+|.|.||+|+..||+.+|.++|. |-+. .-...|++++|.|.||.|+|.||.-+.+..
T Consensus 101 ~~~~Fk~yDe~rDgfIdl~ELK~mmEKLga----pQTH------L~lK~mikeVded~dgklSfreflLIfrka 164 (244)
T KOG0041|consen 101 AESMFKQYDEDRDGFIDLMELKRMMEKLGA----PQTH------LGLKNMIKEVDEDFDGKLSFREFLLIFRKA 164 (244)
T ss_pred HHHHHHHhcccccccccHHHHHHHHHHhCC----chhh------HHHHHHHHHhhcccccchhHHHHHHHHHHH
Confidence 668999999999999999999999999863 4332 247999999999999999999998776654
No 63
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.05 E-value=2.8e-05 Score=62.42 Aligned_cols=70 Identities=10% Similarity=0.205 Sum_probs=51.9
Q ss_pred HHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchh-cCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHH
Q 020137 235 NGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKD-IGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDIL 312 (330)
Q Consensus 235 ~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~-~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil 312 (330)
..++ .+|..+-.+ +|.+|+.||+..+.+--+. ++-+ .+ ...++++++.+|.|+||.|+|.||..++..+.
T Consensus 8 ~~lI-~~FhkYaG~-~~tLsk~Elk~Ll~~Elp~~l~~~--~d----~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 8 EKMM-LTFHKFAGE-KNYLNRDDLQKLMEKEFSEFLKNQ--ND----PMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLL 78 (91)
T ss_pred HHHH-HHHHHHcCC-CCcCCHHHHHHHHHHHhHHHHcCC--CC----HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 3434 788888643 5799999999999763222 2211 12 13699999999999999999999999997663
No 64
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.04 E-value=6e-05 Score=75.11 Aligned_cols=140 Identities=16% Similarity=0.169 Sum_probs=95.6
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhcc--ccCC-----CCCCCHH--HHHHHH--HHhcCCCCCccCHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGV--ELGV-----PPFSEFP--QLNDIL--KKHGAEGEEELGQAQFAELL 194 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~--~~G~-----pp~~~~~--~i~~i~--~~~D~d~dG~I~~eEF~~~~ 194 (330)
.-++=+|..||.|+||-|+++|+....+-... .+|+ +.+.... .++.-+ --++.++++.++++||++.+
T Consensus 233 ~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~ 312 (489)
T KOG2643|consen 233 RNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQ 312 (489)
T ss_pred ccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHH
Confidence 45667899999999999999999876632211 1122 1111111 233322 35699999999999999987
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCC
Q 020137 195 QQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPS 274 (330)
Q Consensus 195 ~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~ 274 (330)
+. |+ .++++.=|..+|+..+|.||..++..++=... +.+ .
T Consensus 313 e~--------Lq----------------------------~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a---~~n-~ 352 (489)
T KOG2643|consen 313 EN--------LQ----------------------------EEILELEFERFDKGDSGAISEVDFAELLLAYA---GVN-S 352 (489)
T ss_pred HH--------HH----------------------------HHHHHHHHHHhCcccccccCHHHHHHHHHHHc---ccc-h
Confidence 65 21 35566789999999999999999998877664 222 1
Q ss_pred chhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHH
Q 020137 275 EANEAVVLLYDAVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 275 ~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
.. -...+.++-++++.+ +..|+++||+.+.+
T Consensus 353 ~~---k~~~lkrvk~kf~~~-~~gISl~Ef~~Ff~ 383 (489)
T KOG2643|consen 353 KK---KHKYLKRVKEKFKDD-GKGISLQEFKAFFR 383 (489)
T ss_pred Hh---HHHHHHHHHHhccCC-CCCcCHHHHHHHHH
Confidence 11 123566777777776 67899999987653
No 65
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=98.02 E-value=6.8e-06 Score=76.55 Aligned_cols=158 Identities=12% Similarity=0.159 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHH
Q 020137 121 EDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQD 200 (330)
Q Consensus 121 ~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~ 200 (330)
|......+..+|+..|.|.||+|+..|+++-+..-..++ +. +.-..-...|+.+|.|+||.|+++||.--+...
T Consensus 96 prrsrrklmviFsKvDVNtDrkisAkEmqrwImektaEH-fq--eameeSkthFraVDpdgDGhvsWdEykvkFlas--- 169 (362)
T KOG4251|consen 96 PRRSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEH-FQ--EAMEESKTHFRAVDPDGDGHVSWDEYKVKFLAS--- 169 (362)
T ss_pred hhHHHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHH-HH--HHHhhhhhheeeeCCCCCCceehhhhhhHHHhh---
Confidence 556778899999999999999999999987766543321 00 100123446788999999999999997644320
Q ss_pred HHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccH---------HHHHHHHHhhchhcCC
Q 020137 201 IADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMST---------TIIRGFLEKNWKDIGL 271 (330)
Q Consensus 201 ~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~---------~ELr~~l~~~g~~~gl 271 (330)
..-..+.+. ..+. +..+-..++ -.+.|..-++++.|+.+. .|+..+|.--
T Consensus 170 --kghsekeva--dair----------lneelkVDe-EtqevlenlkdRwyqaDsppadlllteeEflsFLHPE------ 228 (362)
T KOG4251|consen 170 --KGHSEKEVA--DAIR----------LNEELKVDE-ETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPE------ 228 (362)
T ss_pred --cCcchHHHH--HHhh----------ccCcccccH-HHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChH------
Confidence 011111111 1000 011111111 114455556777777665 7776665421
Q ss_pred CCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHH
Q 020137 272 PPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHV 308 (330)
Q Consensus 272 p~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm 308 (330)
.++ .-....+.++...+|.|||..++-.||+.+.
T Consensus 229 --hSr-gmLrfmVkeivrdlDqdgDkqlSvpeFislp 262 (362)
T KOG4251|consen 229 --HSR-GMLRFMVKEIVRDLDQDGDKQLSVPEFISLP 262 (362)
T ss_pred --hhh-hhHHHHHHHHHHHhccCCCeeecchhhhcCC
Confidence 111 1123468899999999999999999998754
No 66
>PF14658 EF-hand_9: EF-hand domain
Probab=98.01 E-value=1.3e-05 Score=60.51 Aligned_cols=62 Identities=19% Similarity=0.384 Sum_probs=53.9
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCC-CccCHHHHHHHHHH
Q 020137 130 NLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGE-EELGQAQFAELLQQ 196 (330)
Q Consensus 130 ~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~d-G~I~~eEF~~~~~~ 196 (330)
.+|+.+|+++.|.+....|...|+.+|.. . |.+ +.++.+.+++|.++. |.|+++.|+..|++
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~--~-p~e--~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGR--S-PEE--SELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCC--C-CcH--HHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 47999999999999999999999999852 2 332 379999999999998 99999999998874
No 67
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.97 E-value=8.4e-06 Score=51.73 Aligned_cols=29 Identities=17% Similarity=0.370 Sum_probs=26.9
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHhh
Q 020137 127 LAENLFTDLDTEDKGKVCKGEISNALGHM 155 (330)
Q Consensus 127 ~~~~~F~~lD~d~DG~Is~~EL~~aL~~l 155 (330)
+++++|+.+|+|+||+|+.+|++.++++|
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 57899999999999999999999999875
No 68
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=97.88 E-value=4.1e-05 Score=76.75 Aligned_cols=131 Identities=13% Similarity=0.106 Sum_probs=91.9
Q ss_pred HhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHh----cCCCCCccCHHHHHHHHHHHHHHHHHHHh
Q 020137 131 LFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKH----GAEGEEELGQAQFAELLQQVLQDIADALA 206 (330)
Q Consensus 131 ~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~----D~d~dG~I~~eEF~~~~~~il~~~a~~L~ 206 (330)
-|..+|+|+||.|++++|..--..- -+ .-.++.||..+ -.-.+|.++|++|+-.+-. +
T Consensus 283 kFweLD~Dhd~lidk~~L~ry~d~t-------lt--~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA--------~- 344 (493)
T KOG2562|consen 283 KFWELDTDHDGLIDKEDLKRYGDHT-------LT--ERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILA--------E- 344 (493)
T ss_pred HHhhhccccccccCHHHHHHHhccc-------hh--hHHHHHHHhhccccceeeecCcccHHHHHHHHHH--------h-
Confidence 3899999999999999998432211 11 12688899843 3446899999999976532 1
Q ss_pred hhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhch---hcCCCCCchhHHHHHH
Q 020137 207 EKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWK---DIGLPPSEANEAVVLL 283 (330)
Q Consensus 207 ~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~---~~glp~~~~~~~~~~~ 283 (330)
.++.+... ++-.|+.+|-+++|.++..||+-+++..-. ..|..+.. +...
T Consensus 345 ----------------------e~k~t~~S-leYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~----fed~ 397 (493)
T KOG2562|consen 345 ----------------------EDKDTPAS-LEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALP----FEDA 397 (493)
T ss_pred ----------------------ccCCCccc-hhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCccc----HHHH
Confidence 12222222 668999999999999999999877654322 12222211 1236
Q ss_pred HHHHHHhhcCCCCcccCHHHHHH
Q 020137 284 YDAVFADTDNSKNVVETEDEFRE 306 (330)
Q Consensus 284 i~~~f~~~D~d~DG~I~~eEF~~ 306 (330)
..+++.++-.-..+.|+..+|+.
T Consensus 398 l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 398 LCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred HHHHHHHhCccCCCceeHHHHhh
Confidence 88999999988899999999976
No 69
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.88 E-value=7e-05 Score=60.08 Aligned_cols=68 Identities=13% Similarity=0.188 Sum_probs=53.2
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHh-hccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020137 127 LAENLFTDLDTEDKGKVCKGEISNALGH-MGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQV 197 (330)
Q Consensus 127 ~~~~~F~~lD~d~DG~Is~~EL~~aL~~-lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~i 197 (330)
.+..+|..|-.+ .|++++.||+..|++ ++.-. +...++..++++|+..|.|+||.|+|.||+.++..+
T Consensus 9 ~lI~~FhkYaG~-~~tLsk~Elk~Ll~~Elp~~l--~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 9 KMMLTFHKFAGE-KNYLNRDDLQKLMEKEFSEFL--KNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHcCC-CCcCCHHHHHHHHHHHhHHHH--cCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 466789999854 579999999999974 33221 223344589999999999999999999999988764
No 70
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.79 E-value=0.00012 Score=73.13 Aligned_cols=57 Identities=16% Similarity=0.101 Sum_probs=48.8
Q ss_pred HHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHH
Q 020137 234 LNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDILE 313 (330)
Q Consensus 234 ~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil~ 313 (330)
.+..+..+|+.+|.|+||+|+.+|+. + ++.+|+.+|.|+||.|+++||.+.+...+.
T Consensus 332 ~~~~l~~aF~~~D~dgdG~Is~~E~~------~-----------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~~~ 388 (391)
T PRK12309 332 FTHAAQEIFRLYDLDGDGFITREEWL------G-----------------SDAVFDALDLNHDGKITPEEMRAGLGAALR 388 (391)
T ss_pred hhHHHHHHHHHhCCCCCCcCcHHHHH------H-----------------HHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 34557799999999999999999983 1 366899999999999999999999887653
No 71
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=97.73 E-value=0.00026 Score=70.26 Aligned_cols=141 Identities=18% Similarity=0.174 Sum_probs=102.2
Q ss_pred HhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Q 020137 116 LFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQ 195 (330)
Q Consensus 116 ~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~ 195 (330)
..+..|.-....+..+|+..|.|+||.++.+|+++-+..-- ..+.++|+.+|.++||.|+.+|-..+++
T Consensus 41 ~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E-----------~~l~~~F~~iD~~hdG~i~~~Ei~~~l~ 109 (463)
T KOG0036|consen 41 EKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKE-----------LELYRIFQSIDLEHDGKIDPNEIWRYLK 109 (463)
T ss_pred HhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhH-----------HHHHHHHhhhccccCCccCHHHHHHHHH
Confidence 34445533456788999999999999999999998887531 1588999999999999999999988887
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCc
Q 020137 196 QVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSE 275 (330)
Q Consensus 196 ~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~ 275 (330)
+.. .. +++ .+ +.+.|+..|+++++.|+.+|.|..+--. |.+
T Consensus 110 ~~g----i~-----------------------l~d----e~-~~k~~e~~d~~g~~~I~~~e~rd~~ll~-------p~s 150 (463)
T KOG0036|consen 110 DLG----IQ-----------------------LSD----EK-AAKFFEHMDKDGKATIDLEEWRDHLLLY-------PES 150 (463)
T ss_pred HhC----Cc-----------------------cCH----HH-HHHHHHHhccCCCeeeccHHHHhhhhcC-------Chh
Confidence 621 00 122 23 4478999999999999999999887532 333
Q ss_pred hhHHHHHHHHHH--HHhhcCCCCcccCHHHHHHHHHH
Q 020137 276 ANEAVVLLYDAV--FADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 276 ~~~~~~~~i~~~--f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
..+. .++.+ +.-+|.+.+..|. |+|.+....
T Consensus 151 ~i~d---i~~~W~h~~~idigE~~~iP-dg~s~~e~~ 183 (463)
T KOG0036|consen 151 DLED---IYDFWRHVLLIDIGEDAVLP-DGDSKLEND 183 (463)
T ss_pred HHHH---HHHhhhhheEEEccccccCC-cchHHHHhc
Confidence 3222 22222 2246888899998 888766553
No 72
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.73 E-value=3.5e-05 Score=49.11 Aligned_cols=30 Identities=20% Similarity=0.305 Sum_probs=26.4
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHH-hhc
Q 020137 127 LAENLFTDLDTEDKGKVCKGEISNALG-HMG 156 (330)
Q Consensus 127 ~~~~~F~~lD~d~DG~Is~~EL~~aL~-~lg 156 (330)
+++++|..+|+|+||+|+.+|++.+|+ .+|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 478999999999999999999999999 564
No 73
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.71 E-value=0.00017 Score=63.02 Aligned_cols=138 Identities=14% Similarity=0.213 Sum_probs=105.9
Q ss_pred ceEecchhhhhhhcCCCCCCCCC---CCcchHhhHH-HhhhcccccccCCCCCchhhHHHhhhhccCCCCccccccCCCH
Q 020137 6 LTVVDGTQLRSLSHPLALPISDG---STVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHIAGSDNDVTFRIKDFDR 81 (330)
Q Consensus 6 ~~vldgs~~~~~~~~~~f~~ld~---g~~~~~e~~~-~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (330)
-+++|-++|.+|- -.|.-+|. |-+.+..|++ +|.+|- - .|+- -|+.+.. +..++++-
T Consensus 23 Famf~q~QIqEfK--EAF~~mDqnrDG~IdkeDL~d~~aSlGk-----~--~~d~----elDaM~~------Ea~gPINf 83 (171)
T KOG0031|consen 23 FAMFDQSQIQEFK--EAFNLMDQNRDGFIDKEDLRDMLASLGK-----I--ASDE----ELDAMMK------EAPGPINF 83 (171)
T ss_pred HHHhhHHHHHHHH--HHHHHHhccCCCcccHHHHHHHHHHcCC-----C--CCHH----HHHHHHH------hCCCCeeH
Confidence 4578899999998 45888887 9999999999 998887 1 3333 3334433 22457788
Q ss_pred HHHHHHHHHHHHHHHhHhccCCeEEEEeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCC
Q 020137 82 DHASRLASDYITAIADELKDDPLVVSVLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGV 161 (330)
Q Consensus 82 ~~f~~~l~~~l~~~a~~L~~~pivi~~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~ 161 (330)
+.|.+.+-.-| .|. || +..+.++|..||.+++|+|..+.||.+|...|--
T Consensus 84 t~FLTmfGekL-----------------~gt-------dp---e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr--- 133 (171)
T KOG0031|consen 84 TVFLTMFGEKL-----------------NGT-------DP---EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDR--- 133 (171)
T ss_pred HHHHHHHHHHh-----------------cCC-------CH---HHHHHHHHHhcCccCCCccCHHHHHHHHHHhccc---
Confidence 88877765433 232 33 6789999999999999999999999999998742
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Q 020137 162 PPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQ 195 (330)
Q Consensus 162 pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~ 195 (330)
-+ .++++.+++.+-.|..|.++|..|...++
T Consensus 134 -~~--~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 134 -FT--DEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred -CC--HHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 22 23899999999999999999999987764
No 74
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.66 E-value=4.8e-05 Score=48.48 Aligned_cols=29 Identities=10% Similarity=0.021 Sum_probs=24.9
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHH-hhc
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLE-KNW 266 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~-~~g 266 (330)
++.+|+.+|+|+||+|+.+||+.+|. .+|
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 45899999999999999999999998 454
No 75
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.52 E-value=8.4e-05 Score=45.47 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=22.4
Q ss_pred HHHHHHhhcCCCCcccCHHHHHHHH
Q 020137 284 YDAVFADTDNSKNVVETEDEFREHV 308 (330)
Q Consensus 284 i~~~f~~~D~d~DG~I~~eEF~~lm 308 (330)
+..+|+.+|.|+||.|+++||.+++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 3568999999999999999999875
No 76
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.46 E-value=0.00012 Score=44.79 Aligned_cols=24 Identities=4% Similarity=0.099 Sum_probs=21.6
Q ss_pred HHHHhhhcCCCCCcccHHHHHHHH
Q 020137 239 EKMLKEKKNLEGDRMSTTIIRGFL 262 (330)
Q Consensus 239 ~~aF~~~D~D~dG~Is~~ELr~~l 262 (330)
+++|+.+|+|+||+||.+|++.++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHHC
Confidence 479999999999999999998753
No 77
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.46 E-value=9.2e-05 Score=61.61 Aligned_cols=105 Identities=10% Similarity=0.132 Sum_probs=67.1
Q ss_pred CHHHHHHHHHHHHHHHHhHhccCCeEEEEeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhcccc
Q 020137 80 DRDHASRLASDYITAIADELKDDPLVVSVLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVEL 159 (330)
Q Consensus 80 ~~~~f~~~l~~~l~~~a~~L~~~pivi~~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~ 159 (330)
-.++|..-|.+.+..+...+...+.--.--.=...+..-.........+.=.|..+|.|+||.|++.||+.+...|
T Consensus 8 e~~~F~~RL~dWf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l---- 83 (113)
T PF10591_consen 8 ELSQFPRRLLDWFKNLMEQSKSRDELSDHYIELLKRDESSSYSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL---- 83 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCSS-HHHHHHHHHHTGGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT----
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH----
Confidence 3567888888888877666554443220000012333344555567888888999999999999999999655444
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHH
Q 020137 160 GVPPFSEFPQLNDILKKHGAEGEEELGQAQFAE 192 (330)
Q Consensus 160 G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~ 192 (330)
.|+.. =+..++...|.|+||.||+.||..
T Consensus 84 -~~~e~---C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 84 -MPPEH---CARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp -STTGG---GHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred -hhhHH---HHHHHHHHcCCCCCCCCCHHHHcc
Confidence 23322 478899999999999999999963
No 78
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=97.41 E-value=0.00015 Score=62.90 Aligned_cols=93 Identities=12% Similarity=0.174 Sum_probs=68.3
Q ss_pred cccCCCHHHHHHHHHHHHHHHHhHhccCCeEEEEeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHh
Q 020137 75 RIKDFDRDHASRLASDYITAIADELKDDPLVVSVLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGH 154 (330)
Q Consensus 75 ~~~~~~~~~f~~~l~~~l~~~a~~L~~~pivi~~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~ 154 (330)
+++.+|-+.|...+| ++..|| |. .-.+.=+|..+|-|+|+.|...+|...+.+
T Consensus 84 G~GnlsfddFlDmfS-V~sE~A------------------------Pr--dlK~~YAFkIYDfd~D~~i~~~DL~~~l~~ 136 (189)
T KOG0038|consen 84 GRGNLSFDDFLDMFS-VFSEMA------------------------PR--DLKAKYAFKIYDFDGDEFIGHDDLEKTLTS 136 (189)
T ss_pred CCCcccHHHHHHHHH-HHHhhC------------------------hH--HhhhhheeEEeecCCCCcccHHHHHHHHHH
Confidence 356778888777665 344444 12 223455899999999999999999999999
Q ss_pred hccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Q 020137 155 MGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQ 195 (330)
Q Consensus 155 lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~ 195 (330)
|+.. ++.+.+-...++.++++.|.||||++++.||-..+.
T Consensus 137 lTr~-eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~ 176 (189)
T KOG0038|consen 137 LTRD-ELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVIL 176 (189)
T ss_pred Hhhc-cCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Confidence 9864 222211111578999999999999999999987653
No 79
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.40 E-value=0.00047 Score=68.96 Aligned_cols=58 Identities=12% Similarity=0.227 Sum_probs=49.7
Q ss_pred ChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 120 DEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 120 d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
.-..+...++.+|..+|.|+||.|+.+|+.. .+.+|..+|.|+||.|+++||...++.
T Consensus 328 ~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~-------------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 328 GGEAFTHAAQEIFRLYDLDGDGFITREEWLG-------------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred ccChhhHHHHHHHHHhCCCCCCcCcHHHHHH-------------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 3344778889999999999999999999841 367899999999999999999998765
No 80
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.35 E-value=0.00057 Score=56.84 Aligned_cols=61 Identities=13% Similarity=0.169 Sum_probs=42.9
Q ss_pred HHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHH
Q 020137 234 LNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFRE 306 (330)
Q Consensus 234 ~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~ 306 (330)
....+.=.|..+|.|+||.+++.||+.+...+ .|+.. -+...|+.+|.|+||.|+..||..
T Consensus 52 ~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l-----~~~e~-------C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 52 CKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL-----MPPEH-------CARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp GHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT-----STTGG-------GHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH-----hhhHH-------HHHHHHHHcCCCCCCCCCHHHHcc
Confidence 34556678999999999999999998775543 23322 368899999999999999999975
No 81
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.28 E-value=0.00066 Score=56.74 Aligned_cols=68 Identities=18% Similarity=0.173 Sum_probs=53.6
Q ss_pred HHHhhhcCCCCCcccHHHHHHHHHhhch--hcCC--CCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHH
Q 020137 240 KMLKEKKNLEGDRMSTTIIRGFLEKNWK--DIGL--PPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREH 307 (330)
Q Consensus 240 ~aF~~~D~D~dG~Is~~ELr~~l~~~g~--~~gl--p~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~l 307 (330)
--|++.|-|+||+++--||.+++.-.-. +.|- +|.....+....|+.+++.-|.|+||.|+|.||.|.
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 6799999999999999999888765432 2232 334444566778999999999999999999999874
No 82
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=97.25 E-value=0.00052 Score=66.40 Aligned_cols=100 Identities=12% Similarity=0.095 Sum_probs=80.8
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCC
Q 020137 169 QLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNL 248 (330)
Q Consensus 169 ~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D 248 (330)
....+|..+|.+++|.++|-|.+..+. +|.++.....+++-+|+.|+.+
T Consensus 260 ~l~~~f~LFde~~tg~~D~re~v~~la-------------------------------vlc~p~~t~~iiq~afk~f~v~ 308 (412)
T KOG4666|consen 260 KLAPTFMLFDEGTTGNGDYRETVKTLA-------------------------------VLCGPPVTPVIIQYAFKRFSVA 308 (412)
T ss_pred hhhhhhheecCCCCCcccHHHHhhhhe-------------------------------eeeCCCCcHHHHHHHHHhcccc
Confidence 788999999999999999998875431 2233334456688999999999
Q ss_pred CCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 249 EGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 249 ~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
-||.+..++|-.+++.. +|++.. .+-.+|+.++...+|+|.|++|++++..
T Consensus 309 eDg~~ge~~ls~ilq~~---lgv~~l--------~v~~lf~~i~q~d~~ki~~~~f~~fa~~ 359 (412)
T KOG4666|consen 309 EDGISGEHILSLILQVV---LGVEVL--------RVPVLFPSIEQKDDPKIYASNFRKFAAT 359 (412)
T ss_pred cccccchHHHHHHHHHh---cCccee--------eccccchhhhcccCcceeHHHHHHHHHh
Confidence 99999999998888764 365543 3677999999999999999999999853
No 83
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=97.16 E-value=0.0051 Score=62.55 Aligned_cols=146 Identities=10% Similarity=0.149 Sum_probs=89.2
Q ss_pred HHHHHhhhh---cCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHH-HhcCCCCCccCHHHHHHHHHHHHHHHH
Q 020137 127 LAENLFTDL---DTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILK-KHGAEGEEELGQAQFAELLQQVLQDIA 202 (330)
Q Consensus 127 ~~~~~F~~l---D~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~-~~D~d~dG~I~~eEF~~~~~~il~~~a 202 (330)
+++.+|..+ +.++.-..+.+++.+..--|- +.+...+ .+..++. -.|.-+||.|||+||..+ +
T Consensus 34 eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~---~e~~~n~--~~v~Lla~iaD~tKDglisf~eF~af-e------- 100 (694)
T KOG0751|consen 34 ELRSIFLKYASIEKNGESYMTPEDFVRRYLGLY---NESNFND--KIVRLLASIADQTKDGLISFQEFRAF-E------- 100 (694)
T ss_pred HHHHHHHHHhHHhhccccccCHHHHHHHHHhhc---ccccCCh--HHHHHHHhhhhhcccccccHHHHHHH-H-------
Confidence 556665544 555555667777654433321 1122222 4444444 457788999999999763 1
Q ss_pred HHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHH
Q 020137 203 DALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVL 282 (330)
Q Consensus 203 ~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~ 282 (330)
.+ +..+ +.+...+|..||+.++|.+|-++...++.....+-.+|-.-+.+
T Consensus 101 -~~----------------------lC~p---Dal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~e---- 150 (694)
T KOG0751|consen 101 -SV----------------------LCAP---DALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSE---- 150 (694)
T ss_pred -hh----------------------ccCc---hHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcc----
Confidence 12 2222 22344799999999999999999999998876554444433321
Q ss_pred HHHHHHHhhcCCCCcccCHHHHHHHHHHHHHHHHHh
Q 020137 283 LYDAVFADTDNSKNVVETEDEFREHVKDILEKFAEQ 318 (330)
Q Consensus 283 ~i~~~f~~~D~d~DG~I~~eEF~~lm~eil~~~~~q 318 (330)
-|.. .+..+.--.++|.||.+++.++...=+.|
T Consensus 151 fI~~---~Fg~~~~r~~ny~~f~Q~lh~~~~E~~~q 183 (694)
T KOG0751|consen 151 FIKL---HFGDIRKRHLNYAEFTQFLHEFQLEHAEQ 183 (694)
T ss_pred hHHH---HhhhHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 1222 23334455689999999999887755544
No 84
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.15 E-value=0.0013 Score=54.08 Aligned_cols=63 Identities=19% Similarity=0.351 Sum_probs=53.5
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQV 197 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~i 197 (330)
..+.++|..+|. ++|.|+-+..+.++.+-+ +|. ..+..|....|.|++|.++++||.-.|.-|
T Consensus 10 ~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~----L~~----~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 10 QKYDQIFQSLDP-QDGKISGDQAREFFMKSG----LPR----DVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp HHHHHHHHCTSS-STTEEEHHHHHHHHHHTT----SSH----HHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC-CCCeEeHHHHHHHHHHcC----CCH----HHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 578999999995 689999999999999874 443 279999999999999999999999888654
No 85
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=97.04 E-value=0.0082 Score=60.59 Aligned_cols=155 Identities=10% Similarity=0.037 Sum_probs=91.0
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCC-----CCCCHH----HHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVP-----PFSEFP----QLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~p-----p~~~~~----~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
..+.+.++.++..+.|+|...+++..|+.+-..+.++ |.-... ++..||=-++.-+.|.|+..+-+.- .
T Consensus 174 t~~~~~v~~l~~~~~~yl~q~df~~~Lqeli~Thpl~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~tG~iti~el~~s--n 251 (493)
T KOG2562|consen 174 TRLEQFVNLLIQAGCSYLRQDDFKPYLQELIATHPLEFLDEEPEFQERYAETVIQRIFYYLNRSRTGRITIQELLRS--N 251 (493)
T ss_pred HHHHHHHHHHhccCccceeccccHHHHHHHHhcCCchhhccChhHHHHHHHHHhhhhheeeCCccCCceeHHHHHHh--H
Confidence 4567789999999999999999999999885543221 211100 3455666779999999987765541 1
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCch
Q 020137 197 VLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEA 276 (330)
Q Consensus 197 il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~ 276 (330)
.+..++.--.+. .+-|..+.|. . +.-.++..-|-.+|+||||.|++++|..+-.... +
T Consensus 252 ll~~l~~l~eEe--d~nq~~~~FS---------~--e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~tl-------t-- 309 (493)
T KOG2562|consen 252 LLDALLELDEEE--DINQVTRYFS---------Y--EHFYVIYCKFWELDTDHDGLIDKEDLKRYGDHTL-------T-- 309 (493)
T ss_pred HHHHHHHHHHHh--hhhhhhhhee---------H--HHHHHHHHHHhhhccccccccCHHHHHHHhccch-------h--
Confidence 122222211111 1222223332 2 1123344668999999999999999986533211 0
Q ss_pred hHHHHHHHHHHHHhh----cCCCCcccCHHHHHHHH
Q 020137 277 NEAVVLLYDAVFADT----DNSKNVVETEDEFREHV 308 (330)
Q Consensus 277 ~~~~~~~i~~~f~~~----D~d~DG~I~~eEF~~lm 308 (330)
...++.+|.++ -.-.+|.++|++|+-++
T Consensus 310 ----~~ivdRIFs~v~r~~~~~~eGrmdykdFv~Fi 341 (493)
T KOG2562|consen 310 ----ERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFI 341 (493)
T ss_pred ----hHHHHHHHhhccccceeeecCcccHHHHHHHH
Confidence 11456666522 23345556666666555
No 86
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=97.00 E-value=0.0071 Score=61.53 Aligned_cols=175 Identities=17% Similarity=0.234 Sum_probs=115.3
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhHhccCCeEEEEeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhh
Q 020137 76 IKDFDRDHASRLASDYITAIADELKDDPLVVSVLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHM 155 (330)
Q Consensus 76 ~~~~~~~~f~~~l~~~l~~~a~~L~~~pivi~~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~l 155 (330)
-.-++.++|.......|.++||.-|+.-| +.-+=..+..++-.| +..+..+|..||+.++|.+|.++....+++.
T Consensus 63 lgL~~e~~~n~~~v~Lla~iaD~tKDgli--sf~eF~afe~~lC~p---Dal~~~aFqlFDr~~~~~vs~~~~~~if~~t 137 (694)
T KOG0751|consen 63 LGLYNESNFNDKIVRLLASIADQTKDGLI--SFQEFRAFESVLCAP---DALFEVAFQLFDRLGNGEVSFEDVADIFGQT 137 (694)
T ss_pred HhhcccccCChHHHHHHHhhhhhcccccc--cHHHHHHHHhhccCc---hHHHHHHHHHhcccCCCceehHHHHHHHhcc
Confidence 34566778888888999999998777633 211222233334444 3567889999999999999999999999988
Q ss_pred ccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHH
Q 020137 156 GVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLN 235 (330)
Q Consensus 156 g~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~ 235 (330)
...+..|-.-+++.+.. -+..+.-..+.|.||.+++.++ .++
T Consensus 138 ~l~~~~~f~~d~efI~~---~Fg~~~~r~~ny~~f~Q~lh~~-----------------------------------~~E 179 (694)
T KOG0751|consen 138 NLHHHIPFNWDSEFIKL---HFGDIRKRHLNYAEFTQFLHEF-----------------------------------QLE 179 (694)
T ss_pred ccccCCCccCCcchHHH---HhhhHHHHhccHHHHHHHHHHH-----------------------------------HHH
Confidence 76655554333222322 3444455568999998876542 111
Q ss_pred HHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhc-CCCCcccCHHHH
Q 020137 236 GVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTD-NSKNVVETEDEF 304 (330)
Q Consensus 236 ~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D-~d~DG~I~~eEF 304 (330)
. .+++|+..|+.++|.||.=+++..+-.+-.++ +|| .+++.+-.+- .+..-++++.-|
T Consensus 180 ~-~~qafr~~d~~~ng~is~Ldfq~imvt~~~h~-lt~---------~v~~nlv~vagg~~~H~vSf~yf 238 (694)
T KOG0751|consen 180 H-AEQAFREKDKAKNGFISVLDFQDIMVTIRIHL-LTP---------FVEENLVSVAGGNDSHQVSFSYF 238 (694)
T ss_pred H-HHHHHHHhcccCCCeeeeechHhhhhhhhhhc-CCH---------HHhhhhhhhcCCCCccccchHHH
Confidence 2 34899999999999999988888877664443 233 2455554443 333345666655
No 87
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.88 E-value=0.004 Score=51.17 Aligned_cols=67 Identities=18% Similarity=0.260 Sum_probs=54.8
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDILEKFAE 317 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil~~~~~ 317 (330)
....|+..|. ++|+|+-+..+.+|.+- |||. ..+..+...+|.|+||.++++||.-.|.=|.....-
T Consensus 12 y~~~F~~l~~-~~g~isg~~a~~~f~~S----~L~~--------~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~~~~~~ 78 (104)
T PF12763_consen 12 YDQIFQSLDP-QDGKISGDQAREFFMKS----GLPR--------DVLAQIWNLADIDNDGKLDFEEFAIAMHLINRKLNG 78 (104)
T ss_dssp HHHHHHCTSS-STTEEEHHHHHHHHHHT----TSSH--------HHHHHHHHHH-SSSSSEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC-CCCeEeHHHHHHHHHHc----CCCH--------HHHHHHHhhhcCCCCCcCCHHHHHHHHHHHHHHhcC
Confidence 5589999985 68999999999999875 5553 258899999999999999999999998877655543
No 88
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.77 E-value=0.0026 Score=53.24 Aligned_cols=63 Identities=21% Similarity=0.322 Sum_probs=48.2
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHhhcc--ccCC-C-C-CCCHH---HHHHHHHHhcCCCCCccCHHHHHH
Q 020137 130 NLFTDLDTEDKGKVCKGEISNALGHMGV--ELGV-P-P-FSEFP---QLNDILKKHGAEGEEELGQAQFAE 192 (330)
Q Consensus 130 ~~F~~lD~d~DG~Is~~EL~~aL~~lg~--~~G~-p-p-~~~~~---~i~~i~~~~D~d~dG~I~~eEF~~ 192 (330)
.-|+..|-|++|+|+--||.+|+...-. +.|. | | +++.+ .++.+++.-|.|+||.|+|.||++
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK 141 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLK 141 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHh
Confidence 5699999999999999999999987643 3343 2 2 23222 466677788999999999999975
No 89
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=96.75 E-value=0.0021 Score=60.29 Aligned_cols=63 Identities=8% Similarity=0.124 Sum_probs=47.9
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHh-hchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEK-NWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHV 308 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~-~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm 308 (330)
+..+|+..|.|-||+||+.|++++..+ .+..+ ++.-++-...|+.+|+||||.|+++||+--.
T Consensus 103 lmviFsKvDVNtDrkisAkEmqrwImektaEHf--------qeameeSkthFraVDpdgDGhvsWdEykvkF 166 (362)
T KOG4251|consen 103 LMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHF--------QEAMEESKTHFRAVDPDGDGHVSWDEYKVKF 166 (362)
T ss_pred HHHHHhhcccCccccccHHHHHHHHHHHHHHHH--------HHHHhhhhhheeeeCCCCCCceehhhhhhHH
Confidence 668999999999999999999886654 33322 1112234668999999999999999996433
No 90
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=96.58 E-value=0.02 Score=49.49 Aligned_cols=107 Identities=14% Similarity=0.138 Sum_probs=78.0
Q ss_pred HHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcC
Q 020137 168 PQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKN 247 (330)
Q Consensus 168 ~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~ 247 (330)
.++.++|..+|..+||+|++.+--..+| .|.++|- ..+ +.++...+++
T Consensus 11 ~e~ke~F~lfD~~gD~ki~~~q~gdvlR--------alG~nPT-----------------------~ae-V~k~l~~~~~ 58 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTGDGKISGSQVGDVLR--------ALGQNPT-----------------------NAE-VLKVLGQPKR 58 (152)
T ss_pred HHHHHHHHHHhccCcccccHHHHHHHHH--------HhcCCCc-----------------------HHH-HHHHHcCccc
Confidence 3799999999999999999988766554 3666661 122 3355566655
Q ss_pred C--CCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHH
Q 020137 248 L--EGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDILE 313 (330)
Q Consensus 248 D--~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil~ 313 (330)
+ +--+|+-+++-.++..+++.- ..... ..+-+-++.+|.+++|.|...|++.+++..=+
T Consensus 59 ~~~~~~rl~FE~fLpm~q~vaknk---~q~t~----edfvegLrvFDkeg~G~i~~aeLRhvLttlGe 119 (152)
T KOG0030|consen 59 REMNVKRLDFEEFLPMYQQVAKNK---DQGTY----EDFVEGLRVFDKEGNGTIMGAELRHVLTTLGE 119 (152)
T ss_pred chhhhhhhhHHHHHHHHHHHHhcc---ccCcH----HHHHHHHHhhcccCCcceeHHHHHHHHHHHHh
Confidence 5 346799999999999887652 11221 24667788999999999999999999875433
No 91
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.55 E-value=0.018 Score=61.37 Aligned_cols=157 Identities=14% Similarity=0.196 Sum_probs=107.5
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhh
Q 020137 129 ENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEK 208 (330)
Q Consensus 129 ~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~ 208 (330)
.+.|..+- .+.|+|+-..-|.++-+-| +|+. ++..|....|.|+||+++..||.-.|+-|...+. ..
T Consensus 19 ~~qF~~Lk-p~~gfitg~qArnfflqS~----LP~~----VLaqIWALsDldkDGrmdi~EfSIAmkLi~lkLq----G~ 85 (1118)
T KOG1029|consen 19 DAQFGQLK-PGQGFITGDQARNFFLQSG----LPTP----VLAQIWALSDLDKDGRMDIREFSIAMKLIKLKLQ----GI 85 (1118)
T ss_pred HHHHhccC-CCCCccchHhhhhhHHhcC----CChH----HHHHHHHhhhcCccccchHHHHHHHHHHHHHHhc----CC
Confidence 34455554 4579999999999998764 5654 7999999999999999999999998887655432 22
Q ss_pred HHHHH---------------------------------------------------------------------------
Q 020137 209 HIIII--------------------------------------------------------------------------- 213 (330)
Q Consensus 209 pv~v~--------------------------------------------------------------------------- 213 (330)
++..+
T Consensus 86 ~lP~~LPPsll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~spl 165 (1118)
T KOG1029|consen 86 QLPPVLPPSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNSPL 165 (1118)
T ss_pred cCCCCCChHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCCCC
Confidence 21111
Q ss_pred -Hhhhhccchh-------hHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHH
Q 020137 214 -QNIKIINGSK-------LRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYD 285 (330)
Q Consensus 214 -~~~~~~dGs~-------~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~ 285 (330)
|+-+++.|.. +..+.-. ..-+--....|..+|+..+|++|-.--|.+|..- |||-. .+.
T Consensus 166 ~~~ss~se~~~~~~s~~q~~eWAVp-~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS----~Lpq~--------~LA 232 (1118)
T KOG1029|consen 166 PHDSSVSEGRPSIESVNQLEEWAVP-QHNKLKYRQLFNALDKTRSGYLSGQQARSALGQS----GLPQN--------QLA 232 (1118)
T ss_pred CCCcchhhcCccchhhhhhhhcccc-chhhhHHHHHhhhcccccccccccHHHHHHHHhc----CCchh--------hHh
Confidence 3333333322 1011100 0011114589999999999999999889888653 55532 466
Q ss_pred HHHHhhcCCCCcccCHHHHHHHHHHH
Q 020137 286 AVFADTDNSKNVVETEDEFREHVKDI 311 (330)
Q Consensus 286 ~~f~~~D~d~DG~I~~eEF~~lm~ei 311 (330)
.+-.--|.|+||.++-+||.-.|.-+
T Consensus 233 ~IW~LsDvd~DGkL~~dEfilam~li 258 (1118)
T KOG1029|consen 233 HIWTLSDVDGDGKLSADEFILAMHLI 258 (1118)
T ss_pred hheeeeccCCCCcccHHHHHHHHHHH
Confidence 77777899999999999998776433
No 92
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=96.54 E-value=0.0079 Score=61.54 Aligned_cols=72 Identities=10% Similarity=0.060 Sum_probs=59.3
Q ss_pred HHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHH
Q 020137 234 LNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDILE 313 (330)
Q Consensus 234 ~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil~ 313 (330)
+.. +++.|..+| |++|+++..++..+|.+.+.-.| -.+..++.+++...+.|.+|.|+||||..++.+..-
T Consensus 18 l~~-l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g-------~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~s 88 (627)
T KOG0046|consen 18 LRE-LKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLG-------YFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLKS 88 (627)
T ss_pred HHH-HHHHHHhhc-CCCCeeehHHhHHHHHHhccccc-------chhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhhh
Confidence 444 669999999 99999999999999998753222 123457999999999999999999999998877765
Q ss_pred H
Q 020137 314 K 314 (330)
Q Consensus 314 ~ 314 (330)
+
T Consensus 89 ~ 89 (627)
T KOG0046|consen 89 K 89 (627)
T ss_pred h
Confidence 4
No 93
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.17 E-value=0.0048 Score=36.11 Aligned_cols=27 Identities=19% Similarity=0.222 Sum_probs=24.6
Q ss_pred HHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 284 YDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 284 i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
+..+|+.+|.|++|.|++.||..+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 577999999999999999999999875
No 94
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=96.16 E-value=0.01 Score=60.83 Aligned_cols=68 Identities=21% Similarity=0.347 Sum_probs=56.7
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQV 197 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~i 197 (330)
.++++.|..+| |++|+++..++..++.+.+...|.-. .+++.+++...+.|.+|.|+|++|+..+..+
T Consensus 19 ~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~---~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l 86 (627)
T KOG0046|consen 19 RELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFV---REEIKEILGEVGVDADGRVEFEEFVGIFLNL 86 (627)
T ss_pred HHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchh---HHHHHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence 57889999999 89999999999999999876433221 2378999999999999999999999976553
No 95
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.14 E-value=0.013 Score=42.10 Aligned_cols=49 Identities=20% Similarity=0.241 Sum_probs=37.8
Q ss_pred cccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 252 RMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 252 ~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
++|-.|++.+|+.+..++ . +.-+..+|+++|.+++|.++.+||..+.+.
T Consensus 1 kmsf~Evk~lLk~~NI~~----~------~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEM----D------DEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp EBEHHHHHHHHHHTT--------------HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCc----C------HHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 468899999999986532 2 236788999999999999999999988764
No 96
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=96.08 E-value=0.036 Score=62.63 Aligned_cols=75 Identities=16% Similarity=0.195 Sum_probs=59.6
Q ss_pred hhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHH
Q 020137 231 ELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 231 ~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
++.+++ ..-+|+.||++++|+++..+++..|+.+|=. +|..+.. +-+-.+.+++.-+|++.+|+|+..+|+.+|.
T Consensus 2249 Ee~L~E-Fs~~fkhFDkek~G~Ldhq~F~sCLrslgY~--lpmvEe~-~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi 2323 (2399)
T KOG0040|consen 2249 EEQLKE-FSMMFKHFDKEKNGRLDHQHFKSCLRSLGYD--LPMVEEG-EPEPEFEEILDLVDPNRDGYVSLQDYMAFMI 2323 (2399)
T ss_pred HHHHHH-HHHHHHHhchhhccCCcHHHHHHHHHhcCCC--CcccccC-CCChhHHHHHHhcCCCCcCcccHHHHHHHHH
Confidence 345666 4489999999999999999999999998853 4443320 1112589999999999999999999999985
No 97
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.60 E-value=0.014 Score=34.10 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=24.7
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHh
Q 020137 128 AENLFTDLDTEDKGKVCKGEISNALGH 154 (330)
Q Consensus 128 ~~~~F~~lD~d~DG~Is~~EL~~aL~~ 154 (330)
++++|+.+|.+++|.|+..+++.+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 678999999999999999999998875
No 98
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=95.12 E-value=0.078 Score=38.11 Aligned_cols=49 Identities=16% Similarity=0.259 Sum_probs=37.7
Q ss_pred cccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 142 KVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 142 ~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
+++..|++..|+.+.++ . +......+|++.|.+++|.++.+||...++.
T Consensus 1 kmsf~Evk~lLk~~NI~----~--~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIE----M--DDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp EBEHHHHHHHHHHTT----------HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccC----c--CHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 36789999999998764 2 2236788999999999999999999987764
No 99
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=94.72 E-value=0.18 Score=53.85 Aligned_cols=136 Identities=14% Similarity=0.229 Sum_probs=97.8
Q ss_pred HHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHH
Q 020137 124 FAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIAD 203 (330)
Q Consensus 124 ~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~ 203 (330)
-...+..+|...|++++|.++..+...++..+....+ ......++++.+.-+++++..++|..+...
T Consensus 134 ~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~------~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~------- 200 (746)
T KOG0169|consen 134 REHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLS------ESKARRLFKESDNSQTGKLEEEEFVKFRKE------- 200 (746)
T ss_pred HHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhh------HHHHHHHHHHHHhhccceehHHHHHHHHHh-------
Confidence 4678999999999999999999999999999976432 125778899999999999999999887543
Q ss_pred HHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHH
Q 020137 204 ALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLL 283 (330)
Q Consensus 204 ~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~ 283 (330)
+...| + +...|..+=. +.+++|.++|+.+|......-+... ..
T Consensus 201 -~~~rp--------------------------e-v~~~f~~~s~-~~~~ls~~~L~~Fl~~~q~e~~~~~--------~~ 243 (746)
T KOG0169|consen 201 -LTKRP--------------------------E-VYFLFVQYSH-GKEYLSTDDLLRFLEEEQGEDGATL--------DE 243 (746)
T ss_pred -hccCc--------------------------h-HHHHHHHHhC-CCCccCHHHHHHHHHHhcccccccH--------HH
Confidence 21111 2 3356665543 3899999999999988743222211 24
Q ss_pred HHHHHHhhcC----CCCcccCHHHHHHHHH
Q 020137 284 YDAVFADTDN----SKNVVETEDEFREHVK 309 (330)
Q Consensus 284 i~~~f~~~D~----d~DG~I~~eEF~~lm~ 309 (330)
+.++++.+-. -..+.++.+-|.++|.
T Consensus 244 ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~ 273 (746)
T KOG0169|consen 244 AEEIIERYEPSKEFRRHGLLSLDGFTRYLF 273 (746)
T ss_pred HHHHHHHhhhhhhccccceecHHHHHHHhc
Confidence 5666665533 2445688888888774
No 100
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=94.47 E-value=0.16 Score=45.43 Aligned_cols=110 Identities=14% Similarity=0.176 Sum_probs=75.3
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHhhcccc--------------CCCCCCCHH------------------------
Q 020137 127 LAENLFTDLDTEDKGKVCKGEISNALGHMGVEL--------------GVPPFSEFP------------------------ 168 (330)
Q Consensus 127 ~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~--------------G~pp~~~~~------------------------ 168 (330)
.+.+--.-+|.|+||.|...|--..++++|... + +|+.+.|
T Consensus 8 ~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lS-y~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~ 86 (174)
T PF05042_consen 8 VLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALS-YPTQPSWIPDPFFRIYIKNIHKGKHGSDSGA 86 (174)
T ss_pred HHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccC-CccCCCCCCCCceeEEeecccccccCCCccc
Confidence 455666779999999999999888888886521 1 2333332
Q ss_pred ----------HHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHH
Q 020137 169 ----------QLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVI 238 (330)
Q Consensus 169 ----------~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l 238 (330)
..++||.+++..+.+.+++.|..++++. ++....|+- +.+. .-+ +
T Consensus 87 YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~------nr~~~D~~G---------------W~a~---~~E-W 141 (174)
T PF05042_consen 87 YDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKG------NRNANDPFG---------------WFAA---FFE-W 141 (174)
T ss_pred cccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHh------ccccCCcch---------------hhhh---hhH-H
Confidence 2688999999888889999999887753 333333321 2222 122 4
Q ss_pred HHHHhhhcCCCCCcccHHHHHHHHH
Q 020137 239 EKMLKEKKNLEGDRMSTTIIRGFLE 263 (330)
Q Consensus 239 ~~aF~~~D~D~dG~Is~~ELr~~l~ 263 (330)
..+|... +|++|+++++.+|.+++
T Consensus 142 ~~~y~L~-~d~dG~l~Ke~iR~vYD 165 (174)
T PF05042_consen 142 GALYILA-KDKDGFLSKEDIRGVYD 165 (174)
T ss_pred HHHHHHH-cCcCCcEeHHHHhhhcc
Confidence 4566655 67799999999998765
No 101
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=93.16 E-value=0.19 Score=49.13 Aligned_cols=103 Identities=16% Similarity=0.174 Sum_probs=76.1
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADAL 205 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L 205 (330)
..++..|..||.+++|.++..|.-.++.-++ | || .....++--|+.++.+.||.+.-.+|.-+++-+ .++
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavlc---~-p~-~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~-----lgv 328 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVLC---G-PP-VTPVIIQYAFKRFSVAEDGISGEHILSLILQVV-----LGV 328 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheeee---C-CC-CcHHHHHHHHHhcccccccccchHHHHHHHHHh-----cCc
Confidence 5788999999999999997777666555554 3 33 323367888999999999999998887665432 111
Q ss_pred hhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhc
Q 020137 206 AEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNW 266 (330)
Q Consensus 206 ~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g 266 (330)
. .+ . +--.|+.++...+|+|+.+++|++....+
T Consensus 329 ~--------------------------~l-~-v~~lf~~i~q~d~~ki~~~~f~~fa~~~p 361 (412)
T KOG4666|consen 329 E--------------------------VL-R-VPVLFPSIEQKDDPKIYASNFRKFAATEP 361 (412)
T ss_pred c--------------------------ee-e-ccccchhhhcccCcceeHHHHHHHHHhCc
Confidence 1 01 1 33689999999999999999999877653
No 102
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=92.49 E-value=0.16 Score=49.93 Aligned_cols=103 Identities=13% Similarity=0.170 Sum_probs=75.6
Q ss_pred HHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCC-CCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHH
Q 020137 124 FAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPP-FSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIA 202 (330)
Q Consensus 124 ~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp-~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a 202 (330)
+..+++..|..+-.+.++.....-+-.+-..+.. .++| -.+ .+-=||..+|.|.|+.+++.|...+-
T Consensus 209 lg~RL~dWF~~lhe~s~~~~~~ss~~~~~~~~d~--s~~p~CKd--s~gWMFnklD~N~Dl~Ld~sEl~~I~-------- 276 (434)
T KOG3555|consen 209 LGNRLRDWFKALHEDSSQNDKTSSLHSAASGFDT--SILPICKD--SLGWMFNKLDTNYDLLLDQSELRAIE-------- 276 (434)
T ss_pred HHHHHHHHHHHHHhhhhccCcchhhccccccccc--ccCcchhh--hhhhhhhccccccccccCHHHhhhhh--------
Confidence 4568999999998888877777666666555433 2333 332 45668999999999999999986542
Q ss_pred HHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhc
Q 020137 203 DALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNW 266 (330)
Q Consensus 203 ~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g 266 (330)
+ |+ | +.-++..|...|..+||+||.+|...-|.+-+
T Consensus 277 --l--------------dk--------n----E~CikpFfnsCD~~kDg~iS~~EWC~CF~k~~ 312 (434)
T KOG3555|consen 277 --L--------------DK--------N----EACIKPFFNSCDTYKDGSISTNEWCYCFQKSD 312 (434)
T ss_pred --c--------------cC--------c----hhHHHHHHhhhcccccCccccchhhhhhccCC
Confidence 1 11 1 23366899999999999999999998887753
No 103
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=91.22 E-value=0.49 Score=36.38 Aligned_cols=64 Identities=20% Similarity=0.305 Sum_probs=48.4
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCC----CCCccCHHHHHHHHH
Q 020137 127 LAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAE----GEEELGQAQFAELLQ 195 (330)
Q Consensus 127 ~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d----~dG~I~~eEF~~~~~ 195 (330)
++..+|..+-. +.+.++.++++.+|+.- +|.+.. ....+..++..+..+ ..+.++++.|..++.
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~e---Q~~~~~-~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~ 68 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREE---QGEPRL-TDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLF 68 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHT---SS-TTS-SHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHH
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHH---hccccC-cHHHHHHHHHHHccchhhcccCCcCHHHHHHHHC
Confidence 47889999954 68899999999999764 233322 334788888887554 468899999999873
No 104
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=89.66 E-value=2.9 Score=43.96 Aligned_cols=162 Identities=12% Similarity=0.158 Sum_probs=90.4
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCC--CCccCHHHHHHHHHHHHHHHH
Q 020137 125 AMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEG--EEELGQAQFAELLQQVLQDIA 202 (330)
Q Consensus 125 ~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~--dG~I~~eEF~~~~~~il~~~a 202 (330)
-+.+.++|...|.|.||.++-.|+- .+++......+.|... ..+..++++.=.+| +..++..-|+-+.+...+.-
T Consensus 194 v~al~RIFki~D~d~D~~Lsd~Eln-~fQ~~CF~~pl~p~~l-~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfierg- 270 (625)
T KOG1707|consen 194 VKALKRIFKISDSDNDGALSDAELN-DFQKKCFNTPLDPQEL-EDVKNVVQEICPDGVYERGLTLPGFLFLNTLFIERG- 270 (625)
T ss_pred HHHHHHHHhhhccccccccchhhhh-HHHHHhcCCCCCHHHH-HHHHHHHHhhcCchhhhccccccchHHHHHHHHHhc-
Confidence 3567889999999999999999997 5565554322222211 13444444443332 44567777887655432211
Q ss_pred HHHhhhHHHHHH-----------------hhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhh
Q 020137 203 DALAEKHIIIIQ-----------------NIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKN 265 (330)
Q Consensus 203 ~~L~~~pv~v~~-----------------~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~ 265 (330)
..+.--+|.+ ..++=.|+.+. |++ ..-+.+..+|..+|.|+||-++..|+...|...
T Consensus 271 --r~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~E--Ls~--~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~ 344 (625)
T KOG1707|consen 271 --RHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVE--LSP--KGYRFLVDVFEKFDRDNDGALSPEELKDLFSTA 344 (625)
T ss_pred --cccchhhhhhhcCCcchhhhhhhhcCccccCCCCccee--ccH--HHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhC
Confidence 0010000000 00001111111 111 123457799999999999999999999999887
Q ss_pred chh-cCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHH
Q 020137 266 WKD-IGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHV 308 (330)
Q Consensus 266 g~~-~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm 308 (330)
+.. +|-++... . .-.+..|.+++.-|....
T Consensus 345 P~~pW~~~~~~~---------~----t~~~~~G~ltl~g~l~~W 375 (625)
T KOG1707|consen 345 PGSPWTSSPYKD---------S----TVKNERGWLTLNGFLSQW 375 (625)
T ss_pred CCCCCCCCcccc---------c----ceecccceeehhhHHHHH
Confidence 421 22223222 0 112267999999997653
No 105
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=89.59 E-value=0.45 Score=46.28 Aligned_cols=62 Identities=13% Similarity=0.164 Sum_probs=45.1
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHh-hccccCCCCCCCHH-----------HHHHHHHHhcCCCCCccCHHHHHHH
Q 020137 130 NLFTDLDTEDKGKVCKGEISNALGH-MGVELGVPPFSEFP-----------QLNDILKKHGAEGEEELGQAQFAEL 193 (330)
Q Consensus 130 ~~F~~lD~d~DG~Is~~EL~~aL~~-lg~~~G~pp~~~~~-----------~i~~i~~~~D~d~dG~I~~eEF~~~ 193 (330)
-.|...|.|+||.++..||.+.+.. |-.- ..|..+.. .-+.+|+.+|.|.|..|+.+||+.-
T Consensus 248 TFF~LHD~NsDGfldeqELEaLFtkELEKv--YdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~ 321 (442)
T KOG3866|consen 248 TFFALHDLNSDGFLDEQELEALFTKELEKV--YDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLND 321 (442)
T ss_pred hheeeeccCCcccccHHHHHHHHHHHHHHh--cCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhh
Confidence 4588899999999999999977653 2111 23333222 1245789999999999999999864
No 106
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=89.50 E-value=1.3 Score=48.66 Aligned_cols=104 Identities=12% Similarity=0.056 Sum_probs=77.7
Q ss_pred HHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHH
Q 020137 124 FAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIAD 203 (330)
Q Consensus 124 ~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~ 203 (330)
.-.+++++|..+|..+.|.++.+++.++|-.+|...+-.... ..+|..++...|.+.-|.+++.+|...|.+-
T Consensus 745 v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~-~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~------ 817 (890)
T KOG0035|consen 745 VLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQG-IAEWFRLVNKKNPLIQGQVQLLEFEDDLERE------ 817 (890)
T ss_pred HHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHH-HHHHHHHHhccCcccccceeHHHHHhHhhhh------
Confidence 347899999999999999999999999999998653310000 1168888889999998999999999887651
Q ss_pred HHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHH
Q 020137 204 ALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRG 260 (330)
Q Consensus 204 ~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~ 260 (330)
. .+......++ .+|+.+=+++. +|..+||+.
T Consensus 818 -~-----------------------e~l~~~~r~i-~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 818 -Y-----------------------EDLDTELRAI-LAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred -h-----------------------hhhcHHHHHH-HHHHHHHcchh-HHHHHHHHh
Confidence 1 0112334545 78998877766 889999886
No 107
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=89.01 E-value=0.32 Score=40.79 Aligned_cols=98 Identities=13% Similarity=0.229 Sum_probs=60.0
Q ss_pred CCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhh
Q 020137 139 DKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKI 218 (330)
Q Consensus 139 ~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~ 218 (330)
-||.++.+|+..+.+.+....++++. ....++..++.-.....++.+|+..++.. +
T Consensus 36 aDG~v~~~E~~~i~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~l~~~-------~------------- 91 (140)
T PF05099_consen 36 ADGEVDPEEIEAIRQLLAERFGLSPE----EAEELIELADELKQEPIDLEELLRELRDS-------L------------- 91 (140)
T ss_dssp TTSS--CHHHHHHHHHHHHCGCGSCH----HHHHHHHHHCHHHHHCCHHHHHHHHHCTS---------------------
T ss_pred cCCCCCHHHHHHHHHHHHHhhCCCHH----HHHHHHHHHHHHHhccccHHHHHHHHHHh-------h-------------
Confidence 37999999999777766555555554 34555555544444467777887654321 0
Q ss_pred ccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCC
Q 020137 219 INGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPS 274 (330)
Q Consensus 219 ~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~ 274 (330)
+ +..-..++..+|...-. ||.++..|- .++.++...+|+++.
T Consensus 92 ----------~-~~~r~~ll~~l~~ia~A--DG~~~~~E~-~~l~~ia~~L~i~~~ 133 (140)
T PF05099_consen 92 ----------S-PEEREDLLRMLIAIAYA--DGEISPEEQ-EFLRRIAEALGISEE 133 (140)
T ss_dssp ------------HHHHHHHHHHHHHHCTC--TTC-SCCHH-HHHHHHHHHCTS-SS
T ss_pred ----------c-hHHHHHHHHHHHHHHhc--CCCCCHHHH-HHHHHHHHHcCCCHH
Confidence 0 11234567788888876 589998884 477788888888875
No 108
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=87.94 E-value=0.46 Score=46.77 Aligned_cols=58 Identities=14% Similarity=0.083 Sum_probs=46.7
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
+.=+|..+|.|.||.++..||+.+-. +. .+ .=|..+|..+|...||.|+-.||.-.+.
T Consensus 252 ~gWMFnklD~N~Dl~Ld~sEl~~I~l--dk------nE------~CikpFfnsCD~~kDg~iS~~EWC~CF~ 309 (434)
T KOG3555|consen 252 LGWMFNKLDTNYDLLLDQSELRAIEL--DK------NE------ACIKPFFNSCDTYKDGSISTNEWCYCFQ 309 (434)
T ss_pred hhhhhhccccccccccCHHHhhhhhc--cC------ch------hHHHHHHhhhcccccCccccchhhhhhc
Confidence 44699999999999999999997632 11 11 1589999999999999999999976543
No 109
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=87.77 E-value=0.33 Score=47.52 Aligned_cols=64 Identities=16% Similarity=0.123 Sum_probs=47.9
Q ss_pred HHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHH
Q 020137 237 VIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 237 ~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
++.--|..+|+|+++.|.+.|++.+=+-+-. ..-| ..=...+|+-+|.|+|..|+++||+..+.
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k-~s~~--------rkC~rk~~~yCDlNkDKkISl~Ew~~CL~ 397 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKRVLLK-KSKP--------RKCSRKFFKYCDLNKDKKISLDEWRGCLG 397 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHHHHHh-hccH--------HHHhhhcchhcccCCCceecHHHHhhhhc
Confidence 4545799999999999999997654333221 1111 23467899999999999999999998764
No 110
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.71 E-value=4.4 Score=35.21 Aligned_cols=114 Identities=18% Similarity=0.261 Sum_probs=78.6
Q ss_pred hcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020137 118 LEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQV 197 (330)
Q Consensus 118 l~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~i 197 (330)
-.||. +...+ -+|.....| |.++..|..+..+-+...+|+++. .++.++.....-+...+++-.|...+++
T Consensus 24 adDP~-lAa~~-Llf~Vm~AD--G~v~~~E~~a~r~il~~~f~i~~~----~l~ali~~~e~~~~Ea~d~y~fts~l~r- 94 (148)
T COG4103 24 ADDPR-LAAAA-LLFHVMEAD--GTVSESEREAFRAILKENFGIDGE----ELDALIEAGEEAGYEAIDLYSFTSVLKR- 94 (148)
T ss_pred CCCHH-HHHHH-HHHHHHhcc--cCcCHHHHHHHHHHHHHHcCCCHH----HHHHHHHHHHHhhHHHHHHHHHHHHHHH-
Confidence 45666 77777 899999876 889999998776666777888876 4777777666666777899999887764
Q ss_pred HHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCC
Q 020137 198 LQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPP 273 (330)
Q Consensus 198 l~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~ 273 (330)
+|... .-.+++..+|+..- .||.++.-|-..+. +++.-+|+.|
T Consensus 95 ------~Ld~e------------------------~R~eli~~mweIa~--ADg~l~e~Ed~vi~-RvAeLLgV~~ 137 (148)
T COG4103 95 ------HLDEE------------------------QRLELIGLMWEIAY--ADGELDESEDHVIW-RVAELLGVSP 137 (148)
T ss_pred ------hcCHH------------------------HHHHHHHHHHHHHH--ccccccHHHHHHHH-HHHHHhCCCH
Confidence 23221 12345666777764 47888888855433 3444456655
No 111
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=87.17 E-value=1.3 Score=33.93 Aligned_cols=63 Identities=16% Similarity=0.239 Sum_probs=45.9
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCC----CCcccCHHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNS----KNVVETEDEFREHVK 309 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d----~DG~I~~eEF~~lm~ 309 (330)
++.+|+.+-. +.+.+|.++|+.+|...- |.+.... ..+.++|.++..+ ..+.+++++|..+|.
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ---~~~~~~~-----~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~ 68 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQ---GEPRLTD-----EQAKELIEKFEPDERNRQKGQLTLEGFTRFLF 68 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTS---S-TTSSH-----HHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHh---ccccCcH-----HHHHHHHHHHccchhhcccCCcCHHHHHHHHC
Confidence 4478888844 789999999999997653 3232222 3577788777544 478999999999885
No 112
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=84.54 E-value=1 Score=48.63 Aligned_cols=148 Identities=22% Similarity=0.289 Sum_probs=102.1
Q ss_pred CCCCCC--CCcchHhhHH-HhhhcccccccCCCCCchhhHH--HhhhhccCCCCccccccCCCHHHHHHHHHHHHHHHHh
Q 020137 23 LPISDG--STVTGAQLLD-FAENEASSSLFGLSLPQNLKST--ALKHIAGSDNDVTFRIKDFDRDHASRLASDYITAIAD 97 (330)
Q Consensus 23 f~~ld~--g~~~~~e~~~-~~~~~~~~~~~~~~~p~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~f~~~l~~~l~~~a~ 97 (330)
|+.|.- |-+|+.+-|+ +.++| ||+.+..+ +|+++.. ++.+++-+|+=.++-|.+-++-
T Consensus 22 F~~Lkp~~gfitg~qArnfflqS~---------LP~~VLaqIWALsDldk--------DGrmdi~EfSIAmkLi~lkLqG 84 (1118)
T KOG1029|consen 22 FGQLKPGQGFITGDQARNFFLQSG---------LPTPVLAQIWALSDLDK--------DGRMDIREFSIAMKLIKLKLQG 84 (1118)
T ss_pred HhccCCCCCccchHhhhhhHHhcC---------CChHHHHHHHHhhhcCc--------cccchHHHHHHHHHHHHHHhcC
Confidence 666665 7888888888 66554 57777666 6777776 4457888888877777766542
Q ss_pred ----------HhccCC---------------------------------eE--------------EEEeec-------hh
Q 020137 98 ----------ELKDDP---------------------------------LV--------------VSVLDG-------NT 113 (330)
Q Consensus 98 ----------~L~~~p---------------------------------iv--------------i~~~dG-------s~ 113 (330)
-|+.-| || .++-+| ++
T Consensus 85 ~~lP~~LPPsll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~sp 164 (1118)
T KOG1029|consen 85 IQLPPVLPPSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNSP 164 (1118)
T ss_pred CcCCCCCChHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCCC
Confidence 233322 11 234566 33
Q ss_pred HHH---h-hcC--------------hHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 020137 114 LKL---F-LED--------------EDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILK 175 (330)
Q Consensus 114 l~~---f-l~d--------------~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~ 175 (330)
|.. | ..- |..-...++++|..+|+...|+|+-..-|.+|.+-+ +|.. ++..|..
T Consensus 165 l~~~ss~se~~~~~~s~~q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~----Lpq~----~LA~IW~ 236 (1118)
T KOG1029|consen 165 LPHDSSVSEGRPSIESVNQLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQSG----LPQN----QLAHIWT 236 (1118)
T ss_pred CCCCcchhhcCccchhhhhhhhccccchhhhHHHHHhhhcccccccccccHHHHHHHHhcC----Cchh----hHhhhee
Confidence 321 1 111 111235689999999999999999999999998764 4432 6888999
Q ss_pred HhcCCCCCccCHHHHHHHHH
Q 020137 176 KHGAEGEEELGQAQFAELLQ 195 (330)
Q Consensus 176 ~~D~d~dG~I~~eEF~~~~~ 195 (330)
..|.|+||+++-+||+-.|-
T Consensus 237 LsDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 237 LSDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred eeccCCCCcccHHHHHHHHH
Confidence 99999999999999987654
No 113
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=84.49 E-value=1.6 Score=42.52 Aligned_cols=68 Identities=10% Similarity=0.206 Sum_probs=46.1
Q ss_pred HHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHH-------HHHHHHHhhcCCCCcccCHHHHHHHH
Q 020137 240 KMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVL-------LYDAVFADTDNSKNVVETEDEFREHV 308 (330)
Q Consensus 240 ~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~-------~i~~~f~~~D~d~DG~I~~eEF~~lm 308 (330)
..|...|.|+||+++-.||...|.+--..+= .|....+.|.. .-+.+++.+|+|.|-.|+.+||++--
T Consensus 248 TFF~LHD~NsDGfldeqELEaLFtkELEKvY-dpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t 322 (442)
T KOG3866|consen 248 TFFALHDLNSDGFLDEQELEALFTKELEKVY-DPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDT 322 (442)
T ss_pred hheeeeccCCcccccHHHHHHHHHHHHHHhc-CCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhh
Confidence 3578889999999999999888765222111 11111122222 23556788999999999999998654
No 114
>cd07176 terB tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.
Probab=83.97 E-value=4.9 Score=31.86 Aligned_cols=95 Identities=15% Similarity=0.125 Sum_probs=52.6
Q ss_pred CCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhc
Q 020137 140 KGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKII 219 (330)
Q Consensus 140 DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~ 219 (330)
||.++.+|.....+.+....++.+... ..+..+++..-.+- ...+..++...++..+
T Consensus 16 DG~v~~~E~~~i~~~l~~~~~l~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------------------- 72 (111)
T cd07176 16 DGDIDDAELQAIEALLRSLPVLSGFDR-ERLIALLDKLLALL-RPEGLAALLKAAAKLL--------------------- 72 (111)
T ss_pred ccCCCHHHHHHHHHHHHcCccccCCCH-HHHHHHHHHHHHHH-HHhhHHHHHHHHHHhC---------------------
Confidence 799999999977777765555544332 23444444432221 1234555555443311
Q ss_pred cchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcC
Q 020137 220 NGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIG 270 (330)
Q Consensus 220 dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~g 270 (330)
. +.....++..++..... ||.++..|- .+|.++...+|
T Consensus 73 ---------~-~~~r~~~~~~~~~ia~a--DG~~~~~E~-~~L~~l~~~Lg 110 (111)
T cd07176 73 ---------P-PELRETAFAVAVDIAAA--DGEVDPEER-AVLEKLYRALG 110 (111)
T ss_pred ---------C-HHHHHHHHHHHHHHHHc--cCCCCHHHH-HHHHHHHHHhC
Confidence 0 12223446567777754 689999884 36666654443
No 115
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=80.64 E-value=8 Score=30.64 Aligned_cols=89 Identities=12% Similarity=0.149 Sum_probs=55.8
Q ss_pred CCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhh
Q 020137 139 DKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKI 218 (330)
Q Consensus 139 ~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~ 218 (330)
-||.++..|...+-+-+...+|+++. ....++..+........++.+|...++.. .
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~l~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~------------- 67 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERFGLDAE----EAAELLAEAEALEEEAPDLYEFTSLIKEH-------F------------- 67 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHhCcCHH----HHHHHHHHHHHHHHhCCCHHHHHHHHHHh-------C-------------
Confidence 37999999988666555554566543 45666666655555667899998765431 1
Q ss_pred ccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhh
Q 020137 219 INGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKN 265 (330)
Q Consensus 219 ~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~ 265 (330)
++.....+++..|+..-. ||.+++.|-. ++.++
T Consensus 68 -----------~~~~r~~~l~~L~~vA~A--DG~~~~~E~~-~l~~i 100 (104)
T cd07313 68 -----------DYEERLELVEALWEVAYA--DGELDEYEEH-LIRRV 100 (104)
T ss_pred -----------CHHHHHHHHHHHHHHHHh--cCCCCHHHHH-HHHHH
Confidence 011223456677777754 6999999855 44444
No 116
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=79.61 E-value=12 Score=35.56 Aligned_cols=98 Identities=10% Similarity=0.128 Sum_probs=59.5
Q ss_pred CCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhh
Q 020137 139 DKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKI 218 (330)
Q Consensus 139 ~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~ 218 (330)
-||.++..|+. ..+.+-..+++++... ....++|++.-. ...++.+|+..++..+ ...|
T Consensus 68 ADG~Vse~Ei~-~~~~l~~~~~l~~~~r-~~a~~lf~~~k~---~~~~l~~~~~~~~~~~-------~~r~--------- 126 (267)
T PRK09430 68 AKGRVTEADIR-IASQLMDRMNLHGEAR-RAAQQAFREGKE---PDFPLREKLRQFRSVC-------GGRF--------- 126 (267)
T ss_pred cCCCcCHHHHH-HHHHHHHHcCCCHHHH-HHHHHHHHHhcc---cCCCHHHHHHHHHHHh-------cccH---------
Confidence 48999999998 6666655556654321 135566665533 3378899988765421 1111
Q ss_pred ccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCC
Q 020137 219 INGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPP 273 (330)
Q Consensus 219 ~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~ 273 (330)
.....+++..|...=. ||.+++.| +.++.+++.-+|+++
T Consensus 127 -------------~l~~~lL~~l~~vA~A--DG~l~~~E-~~~L~~Ia~~Lgis~ 165 (267)
T PRK09430 127 -------------DLLRMFLEIQIQAAFA--DGSLHPNE-RQVLYVIAEELGFSR 165 (267)
T ss_pred -------------HHHHHHHHHHHHHHHh--cCCCCHHH-HHHHHHHHHHcCCCH
Confidence 1122334445554432 69999999 557777777788875
No 117
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=79.41 E-value=1.5 Score=43.06 Aligned_cols=61 Identities=13% Similarity=0.202 Sum_probs=45.8
Q ss_pred HHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCc
Q 020137 173 ILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDR 252 (330)
Q Consensus 173 i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~ 252 (330)
-|..+|.|+++.|+..||.-+ +++ |..+...++-.+..|+..|.|+|-+
T Consensus 338 ~F~qLdkN~nn~i~rrEwKpF-K~~------------------------------l~k~s~~rkC~rk~~~yCDlNkDKk 386 (421)
T KOG4578|consen 338 YFNQLDKNSNNDIERREWKPF-KRV------------------------------LLKKSKPRKCSRKFFKYCDLNKDKK 386 (421)
T ss_pred eeeeecccccCccchhhcchH-HHH------------------------------HHhhccHHHHhhhcchhcccCCCce
Confidence 488999999999999998643 322 1222233455668999999999999
Q ss_pred ccHHHHHHHHHh
Q 020137 253 MSTTIIRGFLEK 264 (330)
Q Consensus 253 Is~~ELr~~l~~ 264 (330)
||..|++.-|..
T Consensus 387 ISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 387 ISLDEWRGCLGV 398 (421)
T ss_pred ecHHHHhhhhcc
Confidence 999999877653
No 118
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=79.06 E-value=3.8 Score=47.04 Aligned_cols=60 Identities=12% Similarity=0.068 Sum_probs=48.6
Q ss_pred HHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 240 KMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 240 ~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
..|+.+|.||.|-||+.+++++++..- ... ..+++=++.-+.+|.+...+|++|++-..+
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~k------~yt-----qse~dfllscae~dend~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGHK------HYT-----QSEIDFLLSCAEADENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhccc------cch-----hHHHHHHHHhhccCccccccHHHHHHHhcC
Confidence 468899999999999999999998642 121 136788888889999999999999987654
No 119
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=77.76 E-value=5.9 Score=43.65 Aligned_cols=72 Identities=11% Similarity=0.088 Sum_probs=59.2
Q ss_pred HHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHH
Q 020137 235 NGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDIL 312 (330)
Q Consensus 235 ~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil 312 (330)
.+ +.+.|+.+++...|.++.++++..|-.+|... +..+++..++-.+....|+++-|.+++.||.+.|..-+
T Consensus 747 ~E-lrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~-----e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~ 818 (890)
T KOG0035|consen 747 DE-LRALENEQDKIDGGAASPEELLRCLMSLGYNT-----EEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREY 818 (890)
T ss_pred HH-HHHHHhHHHHhhcccCCHHHHHHHHHhcCccc-----chhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhh
Confidence 45 66899999999999999999999998887542 22366777888888899999999999999998887543
No 120
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=77.22 E-value=9.3 Score=44.15 Aligned_cols=59 Identities=17% Similarity=0.304 Sum_probs=49.0
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Q 020137 130 NLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQ 195 (330)
Q Consensus 130 ~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~ 195 (330)
..|.++|.|+.|.|++.++.++|+.... -..+ +++-++.....|.+...+|++|+.-+.
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~k~----ytqs---e~dfllscae~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGHKH----YTQS---EIDFLLSCAEADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhcccc----chhH---HHHHHHHhhccCccccccHHHHHHHhc
Confidence 4689999999999999999999986532 1222 688899999999999999999998653
No 121
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=75.03 E-value=24 Score=28.33 Aligned_cols=63 Identities=14% Similarity=0.203 Sum_probs=39.5
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhcc---------ccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGV---------ELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQ 195 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~---------~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~ 195 (330)
..++-+|+++ .|.+|.+++.-+...|..+-. .+|- ....+...|+.. .....|+.++|+.+|.
T Consensus 3 dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~----~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~ 74 (90)
T PF09069_consen 3 DKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGY----IEPSVRSCFQQV--QLSPKITENQFLDWLM 74 (90)
T ss_dssp HHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT------HHHHHHHHHHT--TT-S-B-HHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccC----cHHHHHHHhccc--CCCCccCHHHHHHHHH
Confidence 4678899999 778999999999988886621 2221 111456666665 2456799999999985
No 122
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=74.21 E-value=2.3 Score=46.95 Aligned_cols=253 Identities=13% Similarity=0.096 Sum_probs=148.7
Q ss_pred CCCCCC---CCcchHhhHH-HhhhcccccccCCCCCchhhHHHhhhhccCCCCccccccCCCHHHHHHHHHHHHHHHHhH
Q 020137 23 LPISDG---STVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHIAGSDNDVTFRIKDFDRDHASRLASDYITAIADE 98 (330)
Q Consensus 23 f~~ld~---g~~~~~e~~~-~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~l~~~l~~~a~~ 98 (330)
|.-+|- |++++++..+ ++..| ||+++-..+-+-=.. ...+-+++..|..-|+.+-++-...
T Consensus 17 ~~~~d~~~~G~i~g~~a~~f~~~s~---------L~~qvl~qiws~~d~------~~~g~l~~q~f~~~lrlva~aq~~~ 81 (847)
T KOG0998|consen 17 FKSADPQGDGRITGAEAVAFLSKSG---------LPDQVLGQIWSLADS------SGKGFLNRQGFYAALRLVAQAQSGR 81 (847)
T ss_pred hhccCcccCCcccHHHhhhhhhccc---------cchhhhhcccccccc------ccCCccccccccccchHhhhhhccc
Confidence 444444 9999999888 55444 566554442221111 1146678888888887776553321
Q ss_pred hccCCeE------------------EEEeech--h-HHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhcc
Q 020137 99 LKDDPLV------------------VSVLDGN--T-LKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGV 157 (330)
Q Consensus 99 L~~~piv------------------i~~~dGs--~-l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~ 157 (330)
=..-++| ..+..|+ . -..+.-.++ -...+..+|..+..+ +|.++-.-.+.+|.+-.
T Consensus 82 ~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~s~~~~~p~~~~q-e~aky~q~f~s~~p~-~g~~sg~~~~pil~~s~- 158 (847)
T KOG0998|consen 82 ELSAKKVLPASAVPPPPKISHDTSPPSRPSSSTSAAPFVPAITPQ-EQAKYDQIFRSLSPS-NGLLSGDKAKPILLNSK- 158 (847)
T ss_pred CcCccccccccCCCCCCccCccCCCcccCCCCCCCcccCCCCCHH-HHHHHHHHHhccCCC-CCccccchhhhhhhcCC-
Confidence 1111111 2233321 1 111122222 346788889999987 89999888888887643
Q ss_pred ccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhH-------HHHHHhhhhccchh-------
Q 020137 158 ELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKH-------IIIIQNIKIINGSK------- 223 (330)
Q Consensus 158 ~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~p-------v~v~~~~~~~dGs~------- 223 (330)
+|.. .+..+....|.|.+|.+++.||...|.-+...+-....-.| |--...+.+-.++.
T Consensus 159 ---Lp~~----~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~~~l~~~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~ 231 (847)
T KOG0998|consen 159 ---LPSD----VLGRIWELSDIDKDGNLDRDEFAVAMHLINDLLNGNSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQ 231 (847)
T ss_pred ---CChh----hhccccccccccccCCCChhhhhhhhhHHHHHhhcccCCCCccCCcccCCcchhcccccCccccccccc
Confidence 2321 56678889999999999999999888755433220000000 00000010001100
Q ss_pred --------------------------------------hHH---HhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHH
Q 020137 224 --------------------------------------LRM---LLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFL 262 (330)
Q Consensus 224 --------------------------------------~~~---~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l 262 (330)
+.. ...+ ..... ..++|..+|++++|+|+-.+.+..|
T Consensus 232 ~~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~vsp-~d~~~-~~~if~q~d~~~dG~I~s~~~~~~f 309 (847)
T KOG0998|consen 232 PFLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQLIVSWSPKVSP-SDKQK-YSKIFSQVDKDNDGSISSNEARNIF 309 (847)
T ss_pred ccccccccccccccccchhcccCCccccccccccccccccccCcccCh-HHHHH-HHHHHHhccccCCCccccccccccc
Confidence 000 1111 11122 4578999999999999999998887
Q ss_pred HhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHHH
Q 020137 263 EKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDILEK 314 (330)
Q Consensus 263 ~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil~~ 314 (330)
..- |++.. .+..+-..+|.++.|.++++||.-.|--+..+
T Consensus 310 ~~~----gl~~~--------~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~~~ 349 (847)
T KOG0998|consen 310 LPF----GLSKP--------RLAHVWLLADTQNTGTLSKDEFALAMHLLEQK 349 (847)
T ss_pred ccC----CCChh--------hhhhhhhhcchhccCcccccccchhhhhhhhh
Confidence 663 55542 36777788999999999999997766544433
No 123
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=74.00 E-value=6.8 Score=40.60 Aligned_cols=65 Identities=14% Similarity=0.108 Sum_probs=53.2
Q ss_pred HHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 234 LNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 234 ~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
.++....-|+.+-.|-+|+|+-.--+.+|.+- .||. .++..+..-.|.|.||.++..||+..|.-
T Consensus 229 QReYYvnQFrtvQpDp~gfisGsaAknFFtKS----klpi--------~ELshIWeLsD~d~DGALtL~EFcAAfHL 293 (737)
T KOG1955|consen 229 QREYYVNQFRTVQPDPHGFISGSAAKNFFTKS----KLPI--------EELSHIWELSDVDRDGALTLSEFCAAFHL 293 (737)
T ss_pred HHHHHHhhhhcccCCcccccccHHHHhhhhhc----cCch--------HHHHHHHhhcccCccccccHHHHHhhHhh
Confidence 34556689999999999999999999999874 3332 24777888899999999999999988753
No 124
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=73.78 E-value=30 Score=37.56 Aligned_cols=96 Identities=14% Similarity=0.231 Sum_probs=67.2
Q ss_pred HHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCC
Q 020137 169 QLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNL 248 (330)
Q Consensus 169 ~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D 248 (330)
-|..+++++|.+++|.+++.+=..+.+.+-- ++ . ...+...|+..+.-
T Consensus 137 wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~----~l-----------------------~-----~~~~~~~f~e~~~~ 184 (746)
T KOG0169|consen 137 WIHSIFQEADKNKNGHMSFDEVLDLLKQLNV----QL-----------------------S-----ESKARRLFKESDNS 184 (746)
T ss_pred HHHHHHHHHccccccccchhhHHHHHHHHHH----hh-----------------------h-----HHHHHHHHHHHHhh
Confidence 3678999999999999999988877654210 01 0 11244678888888
Q ss_pred CCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 249 EGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 249 ~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
++|++...+++.+...++. +| ++..+|...-.+ .+.++-++.+.++.+
T Consensus 185 ~~~k~~~~~~~~~~~~~~~----rp---------ev~~~f~~~s~~-~~~ls~~~L~~Fl~~ 232 (746)
T KOG0169|consen 185 QTGKLEEEEFVKFRKELTK----RP---------EVYFLFVQYSHG-KEYLSTDDLLRFLEE 232 (746)
T ss_pred ccceehHHHHHHHHHhhcc----Cc---------hHHHHHHHHhCC-CCccCHHHHHHHHHH
Confidence 9999999999998887753 33 256666665444 667777776666654
No 125
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=73.52 E-value=4.8 Score=42.34 Aligned_cols=64 Identities=17% Similarity=0.246 Sum_probs=54.7
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 127 LAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 127 ~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
.++.-|..+|+|+.|+++..++..+|+..++ ++| .+ .+.++++++|.+.+|.+...||.++|..
T Consensus 594 ~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~--~~d--~~--~~~~~l~ea~~~~~g~v~l~e~~q~~s~ 657 (680)
T KOG0042|consen 594 RRKTRFAFLDADKKAYQAIADVLKVLKSENV--GWD--ED--RLHEELQEADENLNGFVELREFLQLMSA 657 (680)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHhcC--CCC--HH--HHHHHHHHHHHhhcceeeHHHHHHHHHH
Confidence 4567899999999999999999999998874 333 22 7899999999999999999999998764
No 126
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=69.26 E-value=38 Score=26.63 Aligned_cols=90 Identities=16% Similarity=0.221 Sum_probs=47.2
Q ss_pred CCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhc
Q 020137 140 KGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKII 219 (330)
Q Consensus 140 DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~~ 219 (330)
||.++..|...+-+-+.. +..++.. ...+..+++.. .+...++.+|...++.. +..
T Consensus 13 DG~v~~~E~~~i~~~l~~-~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~l~~~-------~~~------------ 68 (106)
T cd07316 13 DGRVSEAEIQAARALMDQ-MGLDAEA-RREAIRLFNEG---KESDFGLEEYARQFRRA-------CGG------------ 68 (106)
T ss_pred cCCcCHHHHHHHHHHHHH-cCCCHHH-HHHHHHHHHHh---CcCCCCHHHHHHHHHHH-------HCC------------
Confidence 799999998744444333 2222111 11333444433 22226778887665431 110
Q ss_pred cchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhc
Q 020137 220 NGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNW 266 (330)
Q Consensus 220 dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g 266 (330)
++.....++..+|...-. ||.++..|-. .+.+++
T Consensus 69 ----------~~~~r~~~l~~l~~vA~A--DG~~~~~E~~-~l~~ia 102 (106)
T cd07316 69 ----------RPELLLQLLEFLFQIAYA--DGELSEAERE-LLRRIA 102 (106)
T ss_pred ----------CHHHHHHHHHHHHHHHHH--cCCCCHHHHH-HHHHHH
Confidence 112223456677777754 6999999854 444443
No 127
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=68.05 E-value=8.3 Score=40.61 Aligned_cols=65 Identities=12% Similarity=0.011 Sum_probs=54.3
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDIL 312 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil 312 (330)
.+.-|..+|.|+.|+++.+..+++|+..+. +.+ . ...++.+.++|.+-+|.+...||.+++..+-
T Consensus 595 ~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~--~~d--~------~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 595 RKTRFAFLDADKKAYQAIADVLKVLKSENV--GWD--E------DRLHEELQEADENLNGFVELREFLQLMSAIK 659 (680)
T ss_pred HHHHHHhhcchHHHHHHHHHHHHHHHHhcC--CCC--H------HHHHHHHHHHHHhhcceeeHHHHHHHHHHHh
Confidence 447899999999999999999999998763 222 1 2588999999999999999999999987553
No 128
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=62.52 E-value=43 Score=29.15 Aligned_cols=66 Identities=17% Similarity=0.224 Sum_probs=43.6
Q ss_pred HHHhhhh---cCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q 020137 129 ENLFTDL---DTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQV 197 (330)
Q Consensus 129 ~~~F~~l---D~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~i 197 (330)
+++|..| -......++-.-+..+++..+.-- ..-....++-+|..+-..+...|+|++|+..+..+
T Consensus 2 ~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d---~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~l 70 (154)
T PF05517_consen 2 EAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIID---KKLTSTDVDIIFSKVKAKGARKITFEQFLEALAEL 70 (154)
T ss_dssp HHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS-----SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccccccHHHHHHHHHHcCCCC---CCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence 4455555 333345788899999999887631 11112268889999877777789999999887654
No 129
>COG3793 TerB Tellurite resistance protein [Inorganic ion transport and metabolism]
Probab=62.17 E-value=37 Score=29.57 Aligned_cols=99 Identities=14% Similarity=0.162 Sum_probs=53.4
Q ss_pred CCCcccHHHHHHHHHhhccccCCCCCCCHH---HHHHHHHHhcCCCC-CccCHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 020137 139 DKGKVCKGEISNALGHMGVELGVPPFSEFP---QLNDILKKHGAEGE-EELGQAQFAELLQQVLQDIADALAEKHIIIIQ 214 (330)
Q Consensus 139 ~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~---~i~~i~~~~D~d~d-G~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~ 214 (330)
-||-++.+|.+.+++.+...-.+.....+. ..+.+...++.|.. |++.-.+.+.- ++
T Consensus 37 adg~~~~~e~~~~~~~~~s~~~L~~f~~~~i~~~~~~~~~~~~~d~~~gk~ea~~~I~~-----------lk-------- 97 (144)
T COG3793 37 ADGEVDSEEKQKMVQFLRSSAALSVFDSNEINEIFETLVGSFDTDFEIGKREAMKEIED-----------LK-------- 97 (144)
T ss_pred cccccChHHHHHHHHHHHcChhhhhccHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH-----------hc--------
Confidence 368888999999988876543332222111 23444555565544 33333333222 22
Q ss_pred hhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCC
Q 020137 215 NIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPP 273 (330)
Q Consensus 215 ~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~ 273 (330)
.++..-+.+++.+...-. -||-.+++| +.++.++...+|+.|
T Consensus 98 --------------~d~e~Ae~vL~vAv~VA~--aDG~~d~~E-~avl~eI~~aLGL~p 139 (144)
T COG3793 98 --------------HDTEAAEDVLRVAVAVAE--ADGEFEAEE-RAVLREIAGALGLSP 139 (144)
T ss_pred --------------CChHHHHHHHHHHHHHhh--cCCCCCHHH-HHHHHHHHHHhCCCH
Confidence 122333445656666664 468899887 445555555556655
No 130
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=62.06 E-value=31 Score=30.02 Aligned_cols=61 Identities=13% Similarity=0.083 Sum_probs=41.1
Q ss_pred cCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHH
Q 020137 246 KNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDILE 313 (330)
Q Consensus 246 D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil~ 313 (330)
-+.....++-.-+..+++..+.- +-. .. ...++-+|.++-..+...|+|++|.++|.++..
T Consensus 12 G~~~~~~m~~~~F~Kl~kD~~i~-d~k-~t-----~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~ 72 (154)
T PF05517_consen 12 GKKNGTEMDSKNFAKLCKDCGII-DKK-LT-----STDVDIIFSKVKAKGARKITFEQFLEALAELAE 72 (154)
T ss_dssp STSTSSEEEHHHHHHHHHHTSS---SS-S------HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHH
T ss_pred cCCccccccHHHHHHHHHHcCCC-CCC-Cc-----hHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHH
Confidence 34445667888888888887542 111 11 135788999988877788999999999987654
No 131
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=60.36 E-value=64 Score=27.28 Aligned_cols=81 Identities=15% Similarity=0.267 Sum_probs=49.2
Q ss_pred HHHHHHHHhcCCC--CCccCHHHHHHHHHHHHHHHHHHHhhhH-HHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhh
Q 020137 169 QLNDILKKHGAEG--EEELGQAQFAELLQQVLQDIADALAEKH-IIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEK 245 (330)
Q Consensus 169 ~i~~i~~~~D~d~--dG~I~~eEF~~~~~~il~~~a~~L~~~p-v~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~ 245 (330)
.+.++|++++-+. |..++..+....+..+......++...+ +. +.. + +...+-++.-.+..+
T Consensus 42 ~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~---~~~-v-----------~~a~~L~ln~Ll~vy 106 (127)
T PF09068_consen 42 NVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIP---SRP-V-----------DLAVDLLLNWLLNVY 106 (127)
T ss_dssp HHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH--------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC---chh-H-----------HHHHHHHHHHHHHHh
Confidence 4667777776654 4679999999998888766665554321 00 000 0 012234466688999
Q ss_pred cCCCCCcccHHHHHHHHHh
Q 020137 246 KNLEGDRMSTTIIRGFLEK 264 (330)
Q Consensus 246 D~D~dG~Is~~ELr~~l~~ 264 (330)
|++++|+|+.-.++.+|-.
T Consensus 107 D~~rtG~I~vls~KvaL~~ 125 (127)
T PF09068_consen 107 DSQRTGKIRVLSFKVALIT 125 (127)
T ss_dssp -TT--SEEEHHHHHHHHHH
T ss_pred CCCCCCeeehhHHHHHHHH
Confidence 9999999999999988754
No 132
>cd07177 terB_like tellurium resistance terB-like protein. This family consists of tellurium resistance terB proteins, N-terminal domain of heat shock DnaJ-like proteins, N-terminal domain of Mo-dependent nitrogenase-like proteins, C-terminal domain of ABC transporter ATP-binding proteins, C-terminal domain of serine/threonine protein kinase, and many hypothetical bacterial proteins. The function of this family is unknown.
Probab=60.33 E-value=57 Score=24.97 Aligned_cols=28 Identities=4% Similarity=0.103 Sum_probs=18.3
Q ss_pred HHHHHHHHhhhcCCCCCcccHHHHHHHHHhh
Q 020137 235 NGVIEKMLKEKKNLEGDRMSTTIIRGFLEKN 265 (330)
Q Consensus 235 ~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~ 265 (330)
..++..++..... ||.++..|.+ ++.++
T Consensus 73 ~~~l~~~~~ia~a--DG~~~~~E~~-~l~~l 100 (104)
T cd07177 73 EALLAALWEVALA--DGELDPEERA-LLRRL 100 (104)
T ss_pred HHHHHHHHHHHHh--ccCCCHHHHH-HHHHH
Confidence 3446567777754 6999988855 44444
No 133
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=55.61 E-value=18 Score=37.69 Aligned_cols=65 Identities=14% Similarity=0.217 Sum_probs=54.4
Q ss_pred HHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 124 FAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 124 ~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
-..-+.+-|..+-.|-.|.|+-+--+.++.+-. +|- .++..|.+..|.|.||.++..||.+.|.-
T Consensus 229 QReYYvnQFrtvQpDp~gfisGsaAknFFtKSk----lpi----~ELshIWeLsD~d~DGALtL~EFcAAfHL 293 (737)
T KOG1955|consen 229 QREYYVNQFRTVQPDPHGFISGSAAKNFFTKSK----LPI----EELSHIWELSDVDRDGALTLSEFCAAFHL 293 (737)
T ss_pred HHHHHHhhhhcccCCcccccccHHHHhhhhhcc----Cch----HHHHHHHhhcccCccccccHHHHHhhHhh
Confidence 456678889999999999999999998888753 232 26889999999999999999999998753
No 134
>PLN02952 phosphoinositide phospholipase C
Probab=55.38 E-value=86 Score=33.51 Aligned_cols=67 Identities=12% Similarity=0.099 Sum_probs=40.3
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhc---CCCCcccCHHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTD---NSKNVVETEDEFREHVK 309 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D---~d~DG~I~~eEF~~lm~ 309 (330)
+..+|..+=. +++.++.++|+.+|...-. .+... .+.....+++++.+.. ..+.+.++++.|..+|.
T Consensus 40 i~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~---e~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~F~~~l~ 109 (599)
T PLN02952 40 VKDVFCKFSV-GGGHMGADQLRRFLVLHQD---ELDCT-LAEAQRIVEEVINRRHHVTRYTRHGLNLDDFFHFLL 109 (599)
T ss_pred HHHHHHHHhC-CCCccCHHHHHHHHHHhCC---CcCCC-HHHHHHHHHHHHhhccccccccccCcCHHHHHHHHc
Confidence 5578888854 4478999999999988642 22111 1222233444443321 22334689999998886
No 135
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=54.09 E-value=9.9 Score=28.97 Aligned_cols=24 Identities=13% Similarity=0.106 Sum_probs=20.8
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFL 262 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l 262 (330)
+..+|+.+ .++.++|+.++||+.|
T Consensus 8 v~~aFr~l-A~~KpyVT~~dLr~~l 31 (69)
T PF08726_consen 8 VEEAFRAL-AGGKPYVTEEDLRRSL 31 (69)
T ss_dssp HHHHHHHH-CTSSSCEEHHHHHHHS
T ss_pred HHHHHHHH-HcCCCcccHHHHHHHc
Confidence 45999999 7788999999999775
No 136
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=53.94 E-value=19 Score=31.14 Aligned_cols=30 Identities=17% Similarity=0.193 Sum_probs=20.4
Q ss_pred HHHHHHhhc-------CCCCcccCHHHHHHHHHHHHH
Q 020137 284 YDAVFADTD-------NSKNVVETEDEFREHVKDILE 313 (330)
Q Consensus 284 i~~~f~~~D-------~d~DG~I~~eEF~~lm~eil~ 313 (330)
+..+++++. -+.++.|+|+.|+.+|+.+|+
T Consensus 27 lkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe 63 (138)
T PF14513_consen 27 LKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLE 63 (138)
T ss_dssp HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHc
Confidence 455555553 234558999999999999886
No 137
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=52.74 E-value=14 Score=29.26 Aligned_cols=53 Identities=11% Similarity=0.083 Sum_probs=26.9
Q ss_pred CCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 250 GDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 250 dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
||.++..|...+-.-+...+++++. ...++++.+..-.....++.+|.+.+..
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 65 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAE--------EAAELLAEAEALEEEAPDLYEFTSLIKE 65 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHH--------HHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 5777777765544433333454432 2344444444444444566666666554
No 138
>KOG2768 consensus Translation initiation factor 2, beta subunit (eIF-2beta) [Translation, ribosomal structure and biogenesis]
Probab=50.05 E-value=20 Score=33.26 Aligned_cols=41 Identities=15% Similarity=0.257 Sum_probs=32.9
Q ss_pred CCchhhHHHhhhhccCCCCcccc-----ccCCCHHHHHHHHHHHHHH
Q 020137 53 LPQNLKSTALKHIAGSDNDVTFR-----IKDFDRDHASRLASDYITA 94 (330)
Q Consensus 53 ~p~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~f~~~l~~~l~~ 94 (330)
-|+|+-..+|+++-.+|+ ++.. .+.+.|.||..||+.|+.+
T Consensus 135 ~pdHv~~FLlAELgTsGS-idg~~rLviKGrfq~kq~e~VLRrYI~e 180 (231)
T KOG2768|consen 135 SPDHVMQFLLAELGTSGS-IDGQQRLVIKGRFQQKQFENVLRRYIKE 180 (231)
T ss_pred ChHHHHHHHHHHhccccc-cCCCceEEEeccccHHHHHHHHHHHHHH
Confidence 368999999999987676 3222 3678999999999999875
No 139
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=47.92 E-value=19 Score=21.09 Aligned_cols=14 Identities=29% Similarity=0.461 Sum_probs=11.8
Q ss_pred cCCCCCcccHHHHH
Q 020137 136 DTEDKGKVCKGEIS 149 (330)
Q Consensus 136 D~d~DG~Is~~EL~ 149 (330)
|.|+||+|+.-++.
T Consensus 1 DvN~DG~vna~D~~ 14 (21)
T PF00404_consen 1 DVNGDGKVNAIDLA 14 (21)
T ss_dssp -TTSSSSSSHHHHH
T ss_pred CCCCCCcCCHHHHH
Confidence 78999999998887
No 140
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=45.22 E-value=33 Score=30.92 Aligned_cols=38 Identities=24% Similarity=0.366 Sum_probs=34.4
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhHhc-cCCeEEEEeechh
Q 020137 76 IKDFDRDHASRLASDYITAIADELK-DDPLVVSVLDGNT 113 (330)
Q Consensus 76 ~~~~~~~~f~~~l~~~l~~~a~~L~-~~pivi~~~dGs~ 113 (330)
+-=+|++|.++-.+.+...++...+ ++|+||.++.|+-
T Consensus 9 evLisee~I~~ri~ela~~I~~~y~g~~~~vv~iLkGs~ 47 (178)
T COG0634 9 EVLISEEQIKARIKELAAQITEDYGGKDPLVVGVLKGSF 47 (178)
T ss_pred eEeeCHHHHHHHHHHHHHHHHHhhCCCceEEEEEcccch
Confidence 3457999999999999999999999 9999999999994
No 141
>PF14425 Imm3: Immunity protein Imm3
Probab=43.74 E-value=70 Score=26.92 Aligned_cols=82 Identities=16% Similarity=0.222 Sum_probs=51.1
Q ss_pred hHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCC-CCccCHHHHH
Q 020137 113 TLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEG-EEELGQAQFA 191 (330)
Q Consensus 113 ~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~-dG~I~~eEF~ 191 (330)
.-.+|++........+.++|..|| +.|.+..--+-.++..+-..+..-+-.....+-..+.+++... .+.++.+|+.
T Consensus 16 ~y~e~~~~d~s~~eaiar~~~eye--~lg~~EkiIv~~~igEi~l~~~~i~~~~~~~i~~~L~~~~~~~~~~eLt~eE~~ 93 (117)
T PF14425_consen 16 FYDEYLNEDRSYSEAIARTFDEYE--NLGETEKIIVDTAIGEILLSHNKIFVGQKEGITKRLSQFDFEEVKGELTQEEKE 93 (117)
T ss_pred HHHHHHHccCCHHHHHHHHHHHHH--ccCcHHHHHHHHHHHHHHhhcchHHhhHHHHHHHHHHhcChHHHHhHhhHHHHH
Confidence 455667666667888999999997 4588777767777766654322101010012333445555432 3679999999
Q ss_pred HHHHH
Q 020137 192 ELLQQ 196 (330)
Q Consensus 192 ~~~~~ 196 (330)
.++.+
T Consensus 94 dL~~R 98 (117)
T PF14425_consen 94 DLSQR 98 (117)
T ss_pred HHHHH
Confidence 88766
No 142
>PRK06464 phosphoenolpyruvate synthase; Validated
Probab=43.53 E-value=1.1e+02 Score=33.81 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHHHHHHHhHhccCCeEEEEee----------chh---------------HHHhhcCh--HHHHHHHHHH
Q 020137 79 FDRDHASRLASDYITAIADELKDDPLVVSVLD----------GNT---------------LKLFLEDE--DDFAMLAENL 131 (330)
Q Consensus 79 ~~~~~f~~~l~~~l~~~a~~L~~~pivi~~~d----------Gs~---------------l~~fl~d~--~~~~~~~~~~ 131 (330)
..+++|.+.+...+..++..+.-+||+|-.+| |.+ +|-++..| +.|..+++.+
T Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~pv~iRtlD~~~~~~~~l~Ggdk~~~~E~NP~LG~RGiR~~l~~p~~~lf~~qlraI 626 (795)
T PRK06464 547 SPEEFYVDKLAEGIATVAAAFYPKPVIVRLSDFKSNEYANLIGGERYEPEEENPMLGFRGASRYLSESFREAFALECEAI 626 (795)
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCCeEEEEcCCCchhhhHHhccCCcCCCCCCCCccccchhhhcccCchHHHHHHHHHHH
Confidence 34667888889999999999999999999999 543 46677888 8899999999
Q ss_pred hhhhc-CCCCC-------cccHHHHHHHHHhh
Q 020137 132 FTDLD-TEDKG-------KVCKGEISNALGHM 155 (330)
Q Consensus 132 F~~lD-~d~DG-------~Is~~EL~~aL~~l 155 (330)
.+.+| ..-.| .=+.+|++.+.+.+
T Consensus 627 ~rald~~G~~~~~ImvPmV~s~eEa~~~~~~~ 658 (795)
T PRK06464 627 KRVREEMGLTNVEVMIPFVRTVEEAEKVIELL 658 (795)
T ss_pred HHHHHhcCCCCeEEEecCCCCHHHHHHHHHHH
Confidence 99998 33345 12577777666544
No 143
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=43.31 E-value=22 Score=27.07 Aligned_cols=26 Identities=23% Similarity=0.305 Sum_probs=22.6
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNAL 152 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL 152 (330)
..+.++|+.+ .++.++|+..||+..|
T Consensus 6 eqv~~aFr~l-A~~KpyVT~~dLr~~l 31 (69)
T PF08726_consen 6 EQVEEAFRAL-AGGKPYVTEEDLRRSL 31 (69)
T ss_dssp HHHHHHHHHH-CTSSSCEEHHHHHHHS
T ss_pred HHHHHHHHHH-HcCCCcccHHHHHHHc
Confidence 4788999999 7778999999999764
No 144
>PRK09279 pyruvate phosphate dikinase; Provisional
Probab=41.91 E-value=5.1e+02 Score=29.17 Aligned_cols=135 Identities=15% Similarity=0.201 Sum_probs=84.6
Q ss_pred CCCCCc--hhhHHHhhhhccCCCCccccccCCCHHHHHHHHHHHHHHHHhHhc------cCCeEEEEeechhHHHhhcCh
Q 020137 50 GLSLPQ--NLKSTALKHIAGSDNDVTFRIKDFDRDHASRLASDYITAIADELK------DDPLVVSVLDGNTLKLFLEDE 121 (330)
Q Consensus 50 ~~~~p~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~l~~~l~~~a~~L~------~~pivi~~~dGs~l~~fl~d~ 121 (330)
++++|| -|-+++-++|.+.+. .=.+.+.+.+...|..+..... ++|.-|++=-|... +-|
T Consensus 38 glpVPpgF~itt~ac~~~~~~~~--------~~~~~l~~~i~~~l~~lE~~~g~~fg~~~~PLLvSVRSga~~----SmP 105 (879)
T PRK09279 38 GLPVPPGFTITTEACNEYYANGK--------KLPEGLKEEVKEALAKLEELTGKKFGDPENPLLVSVRSGARV----SMP 105 (879)
T ss_pred CCCCCCcEEEcHHHHHHHHhcCc--------cCcHHHHHHHHHHHHHHHHHhCcccCCCCCceeEEEecCCCC----CCC
Confidence 567777 457788888886122 2345566666666666665554 67888887777652 222
Q ss_pred HH--------HHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhc-cccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHH
Q 020137 122 DD--------FAMLAENLFTDLDTEDKGKVCKGEISNALGHMG-VELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAE 192 (330)
Q Consensus 122 ~~--------~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg-~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~ 192 (330)
.- ++....+.+... -++...-++-.+++++.+| +-+|+++..=...++++.+......|..++-+++.+
T Consensus 106 GmmdTiLNlGlnd~~~~~la~~--tg~~~fa~d~yrRfiq~~~~vv~gi~~~~fe~~~~~~k~~~~~~~~~~l~~~~l~~ 183 (879)
T PRK09279 106 GMMDTVLNLGLNDETVEGLAKK--TGNERFAYDSYRRFIQMFGDVVLGIDHELFEEILEELKEKKGVKLDTDLTAEDLKE 183 (879)
T ss_pred CcchhhhcCCCCHHHHHHHHHh--cCChhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCCCCccCCCHHHHHH
Confidence 21 122333333332 2345677888899999888 677887543222456666666777788899999888
Q ss_pred HHHHHH
Q 020137 193 LLQQVL 198 (330)
Q Consensus 193 ~~~~il 198 (330)
++....
T Consensus 184 l~~~~k 189 (879)
T PRK09279 184 LVERYK 189 (879)
T ss_pred HHHHHH
Confidence 776543
No 145
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=41.18 E-value=29 Score=36.85 Aligned_cols=67 Identities=15% Similarity=0.106 Sum_probs=44.6
Q ss_pred cChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHH
Q 020137 119 EDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAEL 193 (330)
Q Consensus 119 ~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~ 193 (330)
+....--..+..+|..+|.|+||-++..|+..++...+. .|..+.. ..+. .-.+..|.+++.-|+..
T Consensus 308 ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~---~pW~~~~--~~~~---t~~~~~G~ltl~g~l~~ 374 (625)
T KOG1707|consen 308 ELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPG---SPWTSSP--YKDS---TVKNERGWLTLNGFLSQ 374 (625)
T ss_pred eccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCC---CCCCCCc--cccc---ceecccceeehhhHHHH
Confidence 333335568889999999999999999999999987753 2322211 0010 11125678888888773
No 146
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=39.87 E-value=24 Score=39.07 Aligned_cols=165 Identities=16% Similarity=0.174 Sum_probs=103.9
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHH
Q 020137 125 AMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADA 204 (330)
Q Consensus 125 ~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~ 204 (330)
...+...|..+|..++|.|+-.+...++..-| +|+. ++-.+..-.|..+-|..+..+|...++.+...-..+
T Consensus 10 q~~~~~~~~~~d~~~~G~i~g~~a~~f~~~s~----L~~q----vl~qiws~~d~~~~g~l~~q~f~~~lrlva~aq~~~ 81 (847)
T KOG0998|consen 10 QPLFDQYFKSADPQGDGRITGAEAVAFLSKSG----LPDQ----VLGQIWSLADSSGKGFLNRQGFYAALRLVAQAQSGR 81 (847)
T ss_pred cchHHHhhhccCcccCCcccHHHhhhhhhccc----cchh----hhhccccccccccCCccccccccccchHhhhhhccc
Confidence 35788999999999999999999998888764 4432 466677778888889999999998887643221111
Q ss_pred HhhhHH-------HH----HH--hhh------hccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhh
Q 020137 205 LAEKHI-------II----IQ--NIK------IINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKN 265 (330)
Q Consensus 205 L~~~pv-------~v----~~--~~~------~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~ 265 (330)
-...+. +- .| +.- +..+..+.. ....+..+ ....|+.+... +|..+-.-.+.+|.+-
T Consensus 82 ~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~s~~~~~p~--~~~qe~ak-y~q~f~s~~p~-~g~~sg~~~~pil~~s 157 (847)
T KOG0998|consen 82 ELSAKKVLPASAVPPPPKISHDTSPPSRPSSSTSAAPFVPA--ITPQEQAK-YDQIFRSLSPS-NGLLSGDKAKPILLNS 157 (847)
T ss_pred CcCccccccccCCCCCCccCccCCCcccCCCCCCCcccCCC--CCHHHHHH-HHHHHhccCCC-CCccccchhhhhhhcC
Confidence 111100 00 00 000 111111111 11111123 34668888775 8888888888777653
Q ss_pred chhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHH
Q 020137 266 WKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDILE 313 (330)
Q Consensus 266 g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil~ 313 (330)
++|.. ....+=.-+|.|.+|.+++.||.-.|.-++.
T Consensus 158 ----~Lp~~--------~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~~ 193 (847)
T KOG0998|consen 158 ----KLPSD--------VLGRIWELSDIDKDGNLDRDEFAVAMHLIND 193 (847)
T ss_pred ----CCChh--------hhccccccccccccCCCChhhhhhhhhHHHH
Confidence 33321 2344555689999999999999888876654
No 147
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=39.56 E-value=1.6e+02 Score=23.48 Aligned_cols=66 Identities=12% Similarity=0.109 Sum_probs=39.0
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhch---hcCC-CCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWK---DIGL-PPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~---~~gl-p~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
.+.+|+.+ .|++|.++..-|..+|..+-. .+|- +..+. +...+...|..+ ...-.|+.++|+.-|.
T Consensus 5 yRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~---~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~ 74 (90)
T PF09069_consen 5 YRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGY---IEPSVRSCFQQV--QLSPKITENQFLDWLM 74 (90)
T ss_dssp HHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT-----HHHHHHHHHHT--TT-S-B-HHHHHHHHH
T ss_pred HHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccC---cHHHHHHHhccc--CCCCccCHHHHHHHHH
Confidence 55789988 789999999988887765311 1111 11222 233688888887 3567899999988775
No 148
>PF06892 Phage_CP76: Phage regulatory protein CII (CP76); InterPro: IPR009679 This entry is represented by Bacteriophage 186, CII. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several phage regulatory protein CII (CP76) sequences which are thought to be DNA binding proteins which are involved in the establishment of lysogeny [].
Probab=38.65 E-value=2.5e+02 Score=24.66 Aligned_cols=90 Identities=11% Similarity=0.185 Sum_probs=58.6
Q ss_pred HHHHHHhcCCCCCccCHHHHHHHHH-----HHHHHHHHHHhhhHHHHHHhhhhccchhhHHHhhhhhhHHHHHHHHHhhh
Q 020137 171 NDILKKHGAEGEEELGQAQFAELLQ-----QVLQDIADALAEKHIIIIQNIKIINGSKLRMLLADELQLNGVIEKMLKEK 245 (330)
Q Consensus 171 ~~i~~~~D~d~dG~I~~eEF~~~~~-----~il~~~a~~L~~~pv~v~~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~ 245 (330)
..+..++..+....++..|.+.+++ .++..++.++..-|+.+=.++. ..+-...++....+..++...+-+..
T Consensus 35 ~~LrNKLNP~q~H~Lt~~el~~i~~~Tgd~~il~~ll~~lg~v~v~lP~~~~--~~~l~~~~l~~~a~~Gela~~a~ea~ 112 (162)
T PF06892_consen 35 QTLRNKLNPEQPHKLTVDELIAITDATGDYRILDALLAELGCVPVVLPKNEA--AKSLPERVLKATAEVGELAREALEAL 112 (162)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHhCCcHHHHHHHHHCCCeeecCCcccc--ccCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556677777777899999999876 5888888888876653111110 11333455555455556554444444
Q ss_pred cCCCCCcccHHHHHHHHHhh
Q 020137 246 KNLEGDRMSTTIIRGFLEKN 265 (330)
Q Consensus 246 D~D~dG~Is~~ELr~~l~~~ 265 (330)
.||+|+..|-+.+.++.
T Consensus 113 ---~dgrit~~er~~i~~~a 129 (162)
T PF06892_consen 113 ---SDGRITRSERNRIIKEA 129 (162)
T ss_pred ---cCCCcCHHHHHHHHHHH
Confidence 58999999988777664
No 149
>PF04391 DUF533: Protein of unknown function (DUF533); InterPro: IPR007486 Some family members may be secreted or integral membrane proteins.
Probab=38.11 E-value=1.1e+02 Score=27.89 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=21.0
Q ss_pred HHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCC
Q 020137 236 GVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPP 273 (330)
Q Consensus 236 ~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~ 273 (330)
++.....-.+|.| +..| |.+|+.++..++||+
T Consensus 146 evY~aS~laid~d-----~~~E-r~YL~~LA~aL~L~~ 177 (188)
T PF04391_consen 146 EVYLASLLAIDVD-----TFAE-RAYLDELAQALGLDP 177 (188)
T ss_pred HHHHHHHHHhCCC-----CHHH-HHHHHHHHHHhCcCH
Confidence 4343455667765 4444 667888888888886
No 150
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=37.37 E-value=67 Score=34.47 Aligned_cols=58 Identities=7% Similarity=-0.010 Sum_probs=43.6
Q ss_pred HHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHH
Q 020137 236 GVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEF 304 (330)
Q Consensus 236 ~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF 304 (330)
-++..+|+.+|++++|.|+-.++-..|..+-. ++ +-..+.-+|+.+|.+++ ..+.+|-
T Consensus 555 ~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~-------~~---~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 555 IFLERLFRLLDDSMTGLLTFKDLVSGLSILKA-------GD---ALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHhcccCCcceeEHHHHHHHHHHHHh-------hh---HHHHHHHHHhhccCCcc-ccccccc
Confidence 34668999999999999999999999887631 11 12246778888888888 7666654
No 151
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=36.68 E-value=16 Score=33.71 Aligned_cols=55 Identities=15% Similarity=0.069 Sum_probs=39.2
Q ss_pred HhhhcC-CCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHH
Q 020137 242 LKEKKN-LEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHV 308 (330)
Q Consensus 242 F~~~D~-D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm 308 (330)
|-.+|. -.||++|-.||...= + -+-| |..-+...|.-+|.|+||.|+.+||-..+
T Consensus 193 f~qld~~p~d~~~sh~el~pl~---a---p~ip------me~c~~~f~e~cd~~nd~~ial~ew~~c~ 248 (259)
T KOG4004|consen 193 FGQLDQHPIDGYLSHTELAPLR---A---PLIP------MEHCTTRFFETCDLDNDKYIALDEWAGCF 248 (259)
T ss_pred eccccCCCcccccccccccccc---C---Cccc------HHhhchhhhhcccCCCCCceeHHHhhccc
Confidence 455565 358999999986431 1 1112 23357889999999999999999997643
No 152
>PF04876 Tenui_NCP: Tenuivirus major non-capsid protein; InterPro: IPR006960 This entry contains the tenuivirus major non-capsid protein. Proteins accumulate in large amounts in tenuivirus infected cells. They are found in the inclusion bodies that are formed after infection [].
Probab=36.23 E-value=3.1e+02 Score=24.30 Aligned_cols=26 Identities=15% Similarity=0.286 Sum_probs=17.3
Q ss_pred HHHHHHhcCCCCCccCHHHHHHHHHH
Q 020137 171 NDILKKHGAEGEEELGQAQFAELLQQ 196 (330)
Q Consensus 171 ~~i~~~~D~d~dG~I~~eEF~~~~~~ 196 (330)
+.++..-|.+.++.|++..|+.+|+.
T Consensus 86 ehllg~~~~~~n~~i~~~~ff~~lQ~ 111 (175)
T PF04876_consen 86 EHLLGGEDDSTNGLIDIGKFFDILQP 111 (175)
T ss_pred HHHhcCCcCCcccceeHHHHHHHHHH
Confidence 33443334445778999999988765
No 153
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=34.72 E-value=31 Score=34.67 Aligned_cols=80 Identities=14% Similarity=0.081 Sum_probs=57.3
Q ss_pred EEEEeechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCc
Q 020137 105 VVSVLDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEE 184 (330)
Q Consensus 105 vi~~~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~ 184 (330)
|+.-.||+-.- |..-+..++++|+.+|..++|+|+.+-++..|..+.. +-++...+.-+-+.+|..+-|-
T Consensus 293 vlfs~d~~l~~-----~~~~s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~-----~vse~a~v~l~~~~l~pE~~~i 362 (449)
T KOG2871|consen 293 VLFSCDGHLVV-----PENPSEQLRRNFHAYDPEDNNFISCSGLQIVMTALNR-----LVSEPAYVMLMRQPLDPESLGI 362 (449)
T ss_pred EEEecCccccC-----CCCCCHHHHhhhhccCccCCCeeecHHHHHHHHHhcc-----cccCHHHHHHhcCccChhhcce
Confidence 56677777332 2234678999999999999999999999999998862 2233334555555778888787
Q ss_pred cCHHHHHHHH
Q 020137 185 LGQAQFAELL 194 (330)
Q Consensus 185 I~~eEF~~~~ 194 (330)
|-.+.|+..+
T Consensus 363 il~~d~lg~~ 372 (449)
T KOG2871|consen 363 ILLEDFLGEF 372 (449)
T ss_pred EEeccccccc
Confidence 7777776544
No 154
>KOG2419 consensus Phosphatidylserine decarboxylase [Lipid transport and metabolism]
Probab=32.71 E-value=45 Score=35.90 Aligned_cols=83 Identities=13% Similarity=-0.015 Sum_probs=58.9
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCC---------------------
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKN--------------------- 296 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~D--------------------- 296 (330)
...+|..+|-+-+++.+-.++-......+..+ ..-..+.+.|-.+..++++-+|.+|+
T Consensus 439 ~~~~~s~~d~~~~fk~sf~~~~~l~~~F~~vv-aa~~~~~~D~~~~k~~~~~~lDl~g~~~~~~~~~~lYs~vS~~~~~~ 517 (975)
T KOG2419|consen 439 AKRILSIVDYEEDFKLSFSEFSDLSFAFGNVV-AANKLAWFDMLNEKEELFKALDLNGDPAHAPKQPVLYSYVSYPFLKK 517 (975)
T ss_pred hhhcccccccccCceEeeehHHHHHHHHHHHH-HhhhcchhhhcccchhheehhhccCCcccCccccchhhhcccccccc
Confidence 34788899999999988776644333333211 01122233344457889999999999
Q ss_pred --cccCHHHHHHHHHHHHHHHHHhhcC
Q 020137 297 --VVETEDEFREHVKDILEKFAEQLDA 321 (330)
Q Consensus 297 --G~I~~eEF~~lm~eil~~~~~ql~~ 321 (330)
|.|+-+|-..++.--.--+|+||+.
T Consensus 518 s~~~vtVDe~v~ll~~~i~~V~~~~er 544 (975)
T KOG2419|consen 518 SFGVVTVDELVALLALDIIQVMLYLER 544 (975)
T ss_pred ccCeeEHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888888888864
No 155
>COG3051 CitF Citrate lyase, alpha subunit [Energy production and conversion]
Probab=32.54 E-value=20 Score=36.06 Aligned_cols=69 Identities=20% Similarity=0.239 Sum_probs=52.0
Q ss_pred CCCCCCC-CCcchHhhHH-Hhhhc------ccccccCCCCC--chhhHHHhhhhccCCCCccccccCCCHHHHHHHHHHH
Q 020137 22 ALPISDG-STVTGAQLLD-FAENE------ASSSLFGLSLP--QNLKSTALKHIAGSDNDVTFRIKDFDRDHASRLASDY 91 (330)
Q Consensus 22 ~f~~ld~-g~~~~~e~~~-~~~~~------~~~~~~~~~~p--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~l~~~ 91 (330)
+|++.=+ |.++.-.... +|.|| ||+||...--| +||+.-+..++..||= .++++.
T Consensus 69 SFHH~fR~GD~vvN~Vm~~Ia~mGfKnLtlA~SSl~~~h~pliehIknGVVt~I~sSGl-----Rg~lg~---------- 133 (513)
T COG3051 69 SFHHAFRGGDLVVNMVMDVIAKMGFKNLTLASSSLSDCHAPLVEHIKNGVVTRIYSSGL-----RGPLGE---------- 133 (513)
T ss_pred EeeehhcCCceeHHHHHHHHHHhCccceeeccchhhhhhHHHHHHHhcCEeeeEeeccc-----cchHHH----------
Confidence 3444333 8889999888 99999 67888777666 8999999999987676 444432
Q ss_pred HHHHHhHhccCCeEEE
Q 020137 92 ITAIADELKDDPLVVS 107 (330)
Q Consensus 92 l~~~a~~L~~~pivi~ 107 (330)
.+..||-.+|++|-
T Consensus 134 --~IS~Gll~~PV~i~ 147 (513)
T COG3051 134 --EISRGLLAEPVQIH 147 (513)
T ss_pred --HHhhhHhhCCeEEe
Confidence 46789999999864
No 156
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=32.32 E-value=2.7e+02 Score=26.40 Aligned_cols=105 Identities=19% Similarity=0.169 Sum_probs=60.5
Q ss_pred CCcchHhhHHHhhhcccccccCCCCCchhhHHHhhhhccCCCCccccccCCCHHHHHHHHHHHHHHHHhHhccCCeEEEE
Q 020137 29 STVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHIAGSDNDVTFRIKDFDRDHASRLASDYITAIADELKDDPLVVSV 108 (330)
Q Consensus 29 g~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~l~~~l~~~a~~L~~~pivi~~ 108 (330)
|++|..|++-+...-. .++|++--...+.+=|.. |+ +...+-.+|.+.++... .
T Consensus 70 G~Vse~Ei~~~~~l~~-----~~~l~~~~r~~a~~lf~~-~k-----~~~~~l~~~~~~~~~~~-------~-------- 123 (267)
T PRK09430 70 GRVTEADIRIASQLMD-----RMNLHGEARRAAQQAFRE-GK-----EPDFPLREKLRQFRSVC-------G-------- 123 (267)
T ss_pred CCcCHHHHHHHHHHHH-----HcCCCHHHHHHHHHHHHH-hc-----ccCCCHHHHHHHHHHHh-------c--------
Confidence 5888888884333333 577776544445555555 65 44455555554444333 1
Q ss_pred eechhHHHhhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 020137 109 LDGNTLKLFLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKK 176 (330)
Q Consensus 109 ~dGs~l~~fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~ 176 (330)
..++.....+.-+|..-=. ||.++..|-. +|++++..+|+++. .++.+...
T Consensus 124 ----------~r~~l~~~lL~~l~~vA~A--DG~l~~~E~~-~L~~Ia~~Lgis~~----df~~~~~~ 174 (267)
T PRK09430 124 ----------GRFDLLRMFLEIQIQAAFA--DGSLHPNERQ-VLYVIAEELGFSRF----QFDQLLRM 174 (267)
T ss_pred ----------ccHHHHHHHHHHHHHHHHh--cCCCCHHHHH-HHHHHHHHcCCCHH----HHHHHHHH
Confidence 2334344444555555444 4889999955 78888877777653 34444443
No 157
>PRK13902 alaS alanyl-tRNA synthetase; Provisional
Probab=32.01 E-value=4e+02 Score=30.03 Aligned_cols=47 Identities=19% Similarity=0.354 Sum_probs=31.7
Q ss_pred CcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCH-HHHHHHHHHHHH
Q 020137 251 DRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETE-DEFREHVKDILE 313 (330)
Q Consensus 251 G~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~-eEF~~lm~eil~ 313 (330)
+.|+-+++-...+.. |+||. .+.++.++ .+=.|+. +.|...|.+--.
T Consensus 428 ~~l~g~~~f~LYDt~----G~P~d--------l~~eia~e----~g~~vd~p~~F~~~~~~~~~ 475 (900)
T PRK13902 428 EEIPLDDLIELYDSH----GIPPE--------IVKEIAKK----KGVEVEVPDNFYSLVAERHE 475 (900)
T ss_pred CCCCHHHHhhhhhcC----CCCHH--------HHHHHHHH----cCCccCchhhHHHHHHHHHH
Confidence 579999988887776 67762 23444433 3346888 789888876544
No 158
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=32.00 E-value=80 Score=33.93 Aligned_cols=75 Identities=7% Similarity=0.070 Sum_probs=53.7
Q ss_pred HHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHH
Q 020137 235 NGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDIL 312 (330)
Q Consensus 235 ~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil 312 (330)
++.++..|..+|+ .+|.++.+|++..+........ ...-.++.......++.+.|.+..|.+.++.+.-++..+.
T Consensus 17 d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~ll~~~~ 91 (646)
T KOG0039|consen 17 DDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANW--LSLIKKQTEEYAALIMEELDPDHKGYITNEDLEILLLQIP 91 (646)
T ss_pred hHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhh--hhhhhhhhhHHHHHhhhhccccccceeeecchhHHHHhch
Confidence 3447788999998 8999999999887765432111 1111123345678899999999999999888888877554
No 159
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase. This model represents pyruvate,phosphate dikinase, also called pyruvate,orthophosphate dikinase. It is similar in sequence to other PEP-utilizing enzymes.
Probab=30.88 E-value=8e+02 Score=27.50 Aligned_cols=137 Identities=15% Similarity=0.225 Sum_probs=85.8
Q ss_pred CCCCCch--hhHHHhhhhccCCCCccccccCCCHHHHHHHHHHHHHHHHhHh------ccCCeEEEEeech-----hHHH
Q 020137 50 GLSLPQN--LKSTALKHIAGSDNDVTFRIKDFDRDHASRLASDYITAIADEL------KDDPLVVSVLDGN-----TLKL 116 (330)
Q Consensus 50 ~~~~p~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~l~~~l~~~a~~L------~~~pivi~~~dGs-----~l~~ 116 (330)
++.+||. |-+++...|.. .. ..-++.+...+...+..+.... ..+|.-+++.-|. ...+
T Consensus 32 glpVPpGFviTt~a~~~~~~-~~-------~~~~~~l~~~i~~~~~~le~~~g~~fg~~~~PllvsvrS~a~~smpgm~~ 103 (856)
T TIGR01828 32 GLPVPPGFTITTEACNEYYA-NG-------KQFPKGLQEEIKEALTLLEEKTGKKFGDTENPLLVSVRSGAAVSMPGMMD 103 (856)
T ss_pred CCCCCCcEEEeHHHHHHHHH-cC-------CcccHHHHHHHHHHHHHHHHHhCcccCCCCCcceEEeccCCCCCCccHHH
Confidence 7788874 56667777764 11 1234556666777777776443 4688999998884 2333
Q ss_pred hhcChHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhc-cccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Q 020137 117 FLEDEDDFAMLAENLFTDLDTEDKGKVCKGEISNALGHMG-VELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQ 195 (330)
Q Consensus 117 fl~d~~~~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg-~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~ 195 (330)
-+-|=. ++.++.+.+.. .-+++..-++.++++++..| +-+|+++..-...++++.+......|+.++-+++.++++
T Consensus 104 tiLn~g-lnd~~~~~l~~--~~g~~~fa~d~yrRfi~~~g~vvl~v~~~~f~~~~~~~~~~~~~~~d~~~s~~~~~~l~~ 180 (856)
T TIGR01828 104 TILNLG-LNDETVEGLAK--LTGNARFAYDSYRRFIQMFGDVVLGIPHELFEQILEAMKEEKGVKLDTDLTADDLKELIE 180 (856)
T ss_pred HHHhCC-CCHHHHHHHHH--hhCChHHHHHHHHHHHhhhcccccCCCchhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 333323 45555555543 22345677788888888887 456666543222456666676777788899888877765
Q ss_pred HH
Q 020137 196 QV 197 (330)
Q Consensus 196 ~i 197 (330)
..
T Consensus 181 ~f 182 (856)
T TIGR01828 181 KY 182 (856)
T ss_pred HH
Confidence 53
No 160
>cd07311 terB_like_1 tellurium resistance terB-like protein, subgroup 1. This family includes several uncharacterized bacterial proteins. The prototype of this CD is tellurite resistance protein from Nostoc punctiforme that belongs to COG3793. Its precise biological function and its mechanism responsible for tellurium resistance still remains rather poorly understood.
Probab=30.27 E-value=3.2e+02 Score=23.71 Aligned_cols=46 Identities=13% Similarity=0.088 Sum_probs=27.5
Q ss_pred HHHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 020137 124 FAMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKK 176 (330)
Q Consensus 124 ~~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~ 176 (330)
....+..+-..-= -||.++..|+..+-.-+. .+|+++. ....+++.
T Consensus 23 ~~~~~~~Ll~iAk--ADG~Vse~Ei~~~~~~m~-~~~L~~e----~~~~aie~ 68 (150)
T cd07311 23 KLAYLKALLVCAK--GDGVISPEERDWAIGYAA-ARGGDAD----MVEELKEY 68 (150)
T ss_pred HHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHH-HcCCCHH----HHHHHHHh
Confidence 4555555555553 379999999975554443 3355543 45566665
No 161
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=30.06 E-value=2e+02 Score=25.84 Aligned_cols=63 Identities=10% Similarity=0.037 Sum_probs=42.4
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccc---cCCCCCCCHHHHHHHHHHhcCCCCCccCHHHH
Q 020137 125 AMLAENLFTDLDTEDKGKVCKGEISNALGHMGVE---LGVPPFSEFPQLNDILKKHGAEGEEELGQAQF 190 (330)
Q Consensus 125 ~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~---~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF 190 (330)
...++++|+.++..+.+.|+..|+..+++..... .|+-.+.- +|..+.... .+.||.+..|.=
T Consensus 95 p~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~--EW~~~y~L~-~d~dG~l~Ke~i 160 (174)
T PF05042_consen 95 PQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFF--EWGALYILA-KDKDGFLSKEDI 160 (174)
T ss_pred HHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhh--HHHHHHHHH-cCcCCcEeHHHH
Confidence 4578999999999888999999999999874321 12211111 455444443 567888887654
No 162
>PF14425 Imm3: Immunity protein Imm3
Probab=29.97 E-value=3.4e+02 Score=22.87 Aligned_cols=84 Identities=10% Similarity=0.012 Sum_probs=51.5
Q ss_pred HHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCC-CcccCHHHHHHHHHHHHH
Q 020137 235 NGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSK-NVVETEDEFREHVKDILE 313 (330)
Q Consensus 235 ~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~-DG~I~~eEF~~lm~eil~ 313 (330)
.+++.++|..|+ +.|.+-+--+-.++..+-.....-..+. ...+-..++++|... -+.++-+|+.+++.. ..
T Consensus 28 ~eaiar~~~eye--~lg~~EkiIv~~~igEi~l~~~~i~~~~----~~~i~~~L~~~~~~~~~~eLt~eE~~dL~~R-~n 100 (117)
T PF14425_consen 28 SEAIARTFDEYE--NLGETEKIIVDTAIGEILLSHNKIFVGQ----KEGITKRLSQFDFEEVKGELTQEEKEDLSQR-IN 100 (117)
T ss_pred HHHHHHHHHHHH--ccCcHHHHHHHHHHHHHHhhcchHHhhH----HHHHHHHHHhcChHHHHhHhhHHHHHHHHHH-HH
Confidence 455668888886 4577655545555544432211111111 223555666666443 367899999998854 57
Q ss_pred HHHHhhcCCCee
Q 020137 314 KFAEQLDANPVY 325 (330)
Q Consensus 314 ~~~~ql~~~pi~ 325 (330)
+|-.||+.-||-
T Consensus 101 kVL~~l~~~~id 112 (117)
T PF14425_consen 101 KVLDGLEKVEID 112 (117)
T ss_pred HHHHHHhcCccc
Confidence 899999999984
No 163
>TIGR01418 PEP_synth phosphoenolpyruvate synthase. Also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes.
Probab=29.96 E-value=2e+02 Score=31.79 Aligned_cols=75 Identities=19% Similarity=0.214 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCeEEEEee----------chh---------------HHHhhcC--hHHHHHHHHHHhh
Q 020137 81 RDHASRLASDYITAIADELKDDPLVVSVLD----------GNT---------------LKLFLED--EDDFAMLAENLFT 133 (330)
Q Consensus 81 ~~~f~~~l~~~l~~~a~~L~~~pivi~~~d----------Gs~---------------l~~fl~d--~~~~~~~~~~~F~ 133 (330)
++.|-+.+...+..++..+.-+||+|-.+| |.+ +|-++.. |+.|..+++.+..
T Consensus 542 ~~~~~~~~~~~y~~i~~~~~~~pV~iRtlD~~~dk~~~~~ggdk~~~~E~NP~LG~RGir~~l~~~~~~lf~~qlraI~r 621 (782)
T TIGR01418 542 RDFFVDKLAEGIAKVAAAFYPKPVIVRTSDFKSNEYRNLIGGEEYEPDEENPMLGWRGASRYYSESYEEAFRLECRAIKR 621 (782)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEEEcCCCCccchhhhhCCCccCCCCCCcccccchhhhhcccccHHHHHHHHHHHHH
Confidence 345558888888999999999999999999 432 4556666 8888888888888
Q ss_pred hh-cCCCCC-------cccHHHHHHHHHhh
Q 020137 134 DL-DTEDKG-------KVCKGEISNALGHM 155 (330)
Q Consensus 134 ~l-D~d~DG-------~Is~~EL~~aL~~l 155 (330)
.+ |....| .=+.+|++.+.+.+
T Consensus 622 al~d~G~~~~~Im~PmV~s~eE~~~~~~~~ 651 (782)
T TIGR01418 622 VREEMGLTNVEVMIPFVRTPEEGKRALEIM 651 (782)
T ss_pred HHHhcCCCCeEEEecCCCCHHHHHHHHHHH
Confidence 88 765455 12567766655444
No 164
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=29.75 E-value=70 Score=34.31 Aligned_cols=59 Identities=20% Similarity=0.327 Sum_probs=46.7
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHH
Q 020137 125 AMLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQF 190 (330)
Q Consensus 125 ~~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF 190 (330)
...+.++|..+|.+++|.|+-.++..+|..+... ..-..+.-+++.+|.+++ ..+.++=
T Consensus 554 ~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~------~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 554 LIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAG------DALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhh------hHHHHHHHHHhhccCCcc-ccccccc
Confidence 4578899999999999999999999999988531 111145667899999988 7777765
No 165
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=28.14 E-value=1e+02 Score=23.14 Aligned_cols=48 Identities=19% Similarity=0.112 Sum_probs=31.4
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhh
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADT 291 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~ 291 (330)
++.+...++....--+-..+||.++..++.-.|.... +..++.+|+.+
T Consensus 25 l~~a~~~l~~~~~~dl~a~~L~~A~~~L~~ItG~~~~------ediLd~IFs~F 72 (73)
T PF12631_consen 25 LEDALEALENGLPLDLVAEDLREALESLGEITGEVVT------EDILDNIFSNF 72 (73)
T ss_dssp HHHHHHHHHTT--HHHHHHHHHHHHHHHHHHCTSS--------HHHHHHHHCTS
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhCCCCh------HHHHHHHHHhh
Confidence 5566666665444446678899999999887775332 34789998764
No 166
>PLN02900 alanyl-tRNA synthetase
Probab=27.69 E-value=9.4e+02 Score=27.32 Aligned_cols=60 Identities=18% Similarity=0.245 Sum_probs=37.1
Q ss_pred HHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHH
Q 020137 238 IEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKDILE 313 (330)
Q Consensus 238 l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~eil~ 313 (330)
+++..+..-+.+.+.|+-++.-...+.. |+|+. .+.++.++ .+=.|+.++|...|.+--.
T Consensus 396 l~~~i~~~~~~~~~~l~g~~af~LydTy----GfP~d--------lt~~ia~e----~g~~vD~~~F~~~~~~~~~ 455 (936)
T PLN02900 396 FKKALAAAKANGGPVLSGKDAFLLYDTY----GFPVD--------LTELMAEE----RGVTVDMEGFEAAMEEARE 455 (936)
T ss_pred HHHHHHHHhhcCCCcCCHHHHHHHHhcc----CCCHH--------HHHHHHHH----cCCeecHHHHHHHHHHHHH
Confidence 3333333333344679999988888776 66752 24444443 3447888999888866543
No 167
>PF13623 SurA_N_2: SurA N-terminal domain
Probab=26.77 E-value=4.1e+02 Score=22.85 Aligned_cols=15 Identities=20% Similarity=0.454 Sum_probs=11.9
Q ss_pred CccCHHHHHHHHHHH
Q 020137 183 EELGQAQFAELLQQV 197 (330)
Q Consensus 183 G~I~~eEF~~~~~~i 197 (330)
..|+++||...+...
T Consensus 47 e~Is~~ef~~~v~~~ 61 (145)
T PF13623_consen 47 EKISYQEFQQRVEQA 61 (145)
T ss_pred EEcCHHHHHHHHHHH
Confidence 469999999887653
No 168
>PRK00199 ihfB integration host factor subunit beta; Reviewed
Probab=25.08 E-value=1e+02 Score=24.18 Aligned_cols=30 Identities=7% Similarity=0.180 Sum_probs=27.7
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhHhccCCeE
Q 020137 76 IKDFDRDHASRLASDYITAIADELKDDPLV 105 (330)
Q Consensus 76 ~~~~~~~~f~~~l~~~l~~~a~~L~~~piv 105 (330)
...+|+.+...++..++..|+..|++...|
T Consensus 14 ~~~~s~~~~~~vv~~~~~~i~~~L~~g~~V 43 (94)
T PRK00199 14 NPHLSAKDVENAVKEILEEMSDALARGDRI 43 (94)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHcCCeE
Confidence 357999999999999999999999999876
No 169
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=24.67 E-value=1.8e+02 Score=23.90 Aligned_cols=60 Identities=15% Similarity=0.398 Sum_probs=36.2
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHhhccccCCCCCCCHH--HHHHHHHHhcCCCCCccCHHHHHHHHH
Q 020137 126 MLAENLFTDLDTEDKGKVCKGEISNALGHMGVELGVPPFSEFP--QLNDILKKHGAEGEEELGQAQFAELLQ 195 (330)
Q Consensus 126 ~~~~~~F~~lD~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~--~i~~i~~~~D~d~dG~I~~eEF~~~~~ 195 (330)
..+++-|+.+-+ ||+|.++.+..++ ||+.+.+.. +++.+-+.-... ...|+.+|..++-.
T Consensus 30 ~~VE~RFd~La~--dG~L~rs~Fg~CI-------GM~dSkeFA~eLFdALaRrr~i~-~~~I~k~eL~efW~ 91 (100)
T PF08414_consen 30 KEVEKRFDKLAK--DGLLPRSDFGECI-------GMKDSKEFAGELFDALARRRGIK-GDSITKDELKEFWE 91 (100)
T ss_dssp HHHHHHHHHH-B--TTBEEGGGHHHHH-------T--S-HHHHHHHHHHHHHHTT---SSEE-HHHHHHHHH
T ss_pred HHHHHHHHHhCc--CCcccHHHHHHhc-------CCcccHHHHHHHHHHHHHhcCCc-cCCcCHHHHHHHHH
Confidence 578889999988 7999999999887 444222211 344444444444 46799998877543
No 170
>KOG1782 consensus Small Nuclear ribonucleoprotein splicing factor [RNA processing and modification]
Probab=24.65 E-value=94 Score=26.38 Aligned_cols=34 Identities=32% Similarity=0.388 Sum_probs=27.4
Q ss_pred HHHhHhccCCeEEEEeechhHHHhhcChHHHHHHH
Q 020137 94 AIADELKDDPLVVSVLDGNTLKLFLEDEDDFAMLA 128 (330)
Q Consensus 94 ~~a~~L~~~pivi~~~dGs~l~~fl~d~~~~~~~~ 128 (330)
.++..|.++-+|++| ||.+|..++.+=++|++.+
T Consensus 13 sl~~~~dkKllVlLR-DGR~L~G~LRSfDQFaNlv 46 (129)
T KOG1782|consen 13 SLVEYLDKKLLVLLR-DGRKLIGVLRSFDQFANLV 46 (129)
T ss_pred HHHHHhcceEEEEEe-cCcchhhhhhhHHHHHHHH
Confidence 367778888777776 9999999999988887543
No 171
>TIGR03683 A-tRNA_syn_arch alanyl-tRNA synthetase. This family of alanyl-tRNA synthetases is limited to the archaea, and is a subset of those sequences identified by the model pfam07973 covering the second additional domain (SAD) of alanyl and threonyl tRNA synthetases.
Probab=24.30 E-value=5.9e+02 Score=28.71 Aligned_cols=47 Identities=15% Similarity=0.270 Sum_probs=31.2
Q ss_pred CcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHH-HHHHHHHHHHH
Q 020137 251 DRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETED-EFREHVKDILE 313 (330)
Q Consensus 251 G~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~e-EF~~lm~eil~ 313 (330)
+.|+.+++-...+.. |+||. .+.++.++.. =.|+.. .|.+.|.+.-.
T Consensus 432 ~~i~g~~~f~LyDTy----GfP~d--------l~~eia~e~g----~~vd~~~~F~~~~~~~~~ 479 (902)
T TIGR03683 432 KEIPLDDLIELYDSH----GIPPE--------IVKEIAAELG----AEVEIPDNFYSIVAERHE 479 (902)
T ss_pred CcCCHHHHHHHHHcc----CCCHH--------HHHHHHHHcC----CcccCCccHHHHHHHHHH
Confidence 469999998888876 67762 3455555433 356776 78777766554
No 172
>PLN02952 phosphoinositide phospholipase C
Probab=24.20 E-value=1.6e+02 Score=31.50 Aligned_cols=53 Identities=15% Similarity=0.071 Sum_probs=38.2
Q ss_pred CCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHH
Q 020137 249 EGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVKD 310 (330)
Q Consensus 249 ~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~e 310 (330)
+.|.++-+|++.+.+.+-.....|+ .++..+|.++-.+ ++.++.++|.+++++
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r--------~ei~~lf~~~~~~-~~~mt~~~l~~FL~~ 65 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPP--------DDVKDVFCKFSVG-GGHMGADQLRRFLVL 65 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCCh--------HHHHHHHHHHhCC-CCccCHHHHHHHHHH
Confidence 4689999999888776632111122 2588999998654 468999999999975
No 173
>PF01411 tRNA-synt_2c: tRNA synthetases class II (A); InterPro: IPR018164 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. Alanyl-tRNA synthetase (6.1.1.7 from EC) is an alpha4 tetramer that belongs to class IIc. ; GO: 0000166 nucleotide binding, 0004813 alanine-tRNA ligase activity, 0005524 ATP binding, 0006419 alanyl-tRNA aminoacylation, 0005737 cytoplasm; PDB: 3HY1_A 3HXZ_C 3HXY_A 3HXU_A 3HY0_B 3HXV_A 3HXX_A 3HXW_A 2E1B_A 2ZZG_B ....
Probab=23.68 E-value=3.9e+02 Score=28.24 Aligned_cols=128 Identities=16% Similarity=0.257 Sum_probs=62.9
Q ss_pred CCCCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHH---HHHHHHHHHHHHHhhhHHHHH
Q 020137 137 TEDKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAE---LLQQVLQDIADALAEKHIIII 213 (330)
Q Consensus 137 ~d~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~---~~~~il~~~a~~L~~~pv~v~ 213 (330)
..|-|++=+.-||+|++.. ..+|++..--..++..+++.+.. .|.|+.+ .+.+|+..-..
T Consensus 294 N~GrGYvlRriiRRa~r~~-~~lg~~~~fl~~lv~~vi~~~~~------~ypel~~~~~~I~~ii~~EE~---------- 356 (552)
T PF01411_consen 294 NEGRGYVLRRIIRRAVRFG-RKLGIEEPFLYELVPVVIESMGD------FYPELKENKDYIKDIIKEEEE---------- 356 (552)
T ss_dssp SSHHHHHHHHHHHHHHHHH-HHTT-SS--HHHHHHHHHHHHTT------TGTHHHHCHHHHHHHHHHHHH----------
T ss_pred ccCCcchHHHHHHHHHHHH-HHhCCCccchHHHHHHHHHHhhc------cChhhhhhHHHHHHHHHHHHH----------
Confidence 3445677788888888765 55666554111234444444422 2555543 23332221111
Q ss_pred HhhhhccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcC
Q 020137 214 QNIKIINGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDN 293 (330)
Q Consensus 214 ~~~~~~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~ 293 (330)
+|.+.-..-.+++++..+.+-+ .+.|+-+.+....+.. |+|+. .+.++.++
T Consensus 357 ------------~F~~TL~~G~~~l~~~i~~~~~--~~~lsge~aF~LYDTy----GfP~D--------lt~eia~e--- 407 (552)
T PF01411_consen 357 ------------RFLKTLERGLKLLEKLIKKLKK--KKELSGEDAFKLYDTY----GFPLD--------LTEEIAEE--- 407 (552)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHC--CSEE-HHHHHHHHHHH-------HH--------HHHHHHHT---
T ss_pred ------------HHHHHHHHHHHHHHHHHhhhcc--ccCCChHHheeehhcc----CCCHH--------HHHHHHHH---
Confidence 1112111112224444444433 7889999999888887 56651 34555544
Q ss_pred CCCcccCHHHHHHHHHHH
Q 020137 294 SKNVVETEDEFREHVKDI 311 (330)
Q Consensus 294 d~DG~I~~eEF~~lm~ei 311 (330)
.+=.|+.+.|.+.|.+-
T Consensus 408 -~gl~vD~~~f~~~m~~q 424 (552)
T PF01411_consen 408 -KGLSVDEEGFEYAMEEQ 424 (552)
T ss_dssp -TT-EE-HHCCHHHHHHH
T ss_pred -hceeecHHHHHHHHHHH
Confidence 33468888898888653
No 174
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=23.43 E-value=1.7e+02 Score=22.25 Aligned_cols=48 Identities=17% Similarity=0.261 Sum_probs=31.5
Q ss_pred cccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH
Q 020137 142 KVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVL 198 (330)
Q Consensus 142 ~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il 198 (330)
.++-..|-.+++.. +||. .++.+...++.=..++|+.+||+..++.|.
T Consensus 8 ~~~F~~L~~~l~~~-----l~~~----~~~~l~~~Y~~~k~~kIsR~~fvr~lR~IV 55 (70)
T PF12174_consen 8 WMPFPMLFSALSKH-----LPPS----KMDLLQKHYEEFKKKKISREEFVRKLRQIV 55 (70)
T ss_pred cccHHHHHHHHHHH-----CCHH----HHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 44555666666654 3443 355555555555678899999999998764
No 175
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.23 E-value=2.1e+02 Score=25.08 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=40.3
Q ss_pred HHHhhhcCCCCCcccHHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHH
Q 020137 240 KMLKEKKNLEGDRMSTTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFADTDNSKNVVETEDEFREHVK 309 (330)
Q Consensus 240 ~aF~~~D~D~dG~Is~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~~~D~d~DG~I~~eEF~~lm~ 309 (330)
-.|.++.. ||.++..|...+..-+....|+++. .+++++.....-+.-.+++--|..-|+
T Consensus 34 Llf~Vm~A--DG~v~~~E~~a~r~il~~~f~i~~~--------~l~ali~~~e~~~~Ea~d~y~fts~l~ 93 (148)
T COG4103 34 LLFHVMEA--DGTVSESEREAFRAILKENFGIDGE--------ELDALIEAGEEAGYEAIDLYSFTSVLK 93 (148)
T ss_pred HHHHHHhc--ccCcCHHHHHHHHHHHHHHcCCCHH--------HHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 58888865 6899999977666556667788764 355566555555556666666655554
No 176
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=23.05 E-value=1.4e+02 Score=26.65 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=31.5
Q ss_pred cCCCHHHHHHHHHHHHHHHHhHhc---cCCeEEEEeech
Q 020137 77 KDFDRDHASRLASDYITAIADELK---DDPLVVSVLDGN 112 (330)
Q Consensus 77 ~~~~~~~f~~~l~~~l~~~a~~L~---~~pivi~~~dGs 112 (330)
--+|++|+...++.+...++...+ ++|++|.++.|+
T Consensus 7 ~l~~~~~i~~~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg 45 (178)
T PRK15423 7 VMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGS 45 (178)
T ss_pred EecCHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCC
Confidence 357999999999999999998887 368999999998
No 177
>cd07176 terB tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.
Probab=23.00 E-value=2.3e+02 Score=22.00 Aligned_cols=12 Identities=0% Similarity=0.011 Sum_probs=5.3
Q ss_pred HHHHHHHhhcCC
Q 020137 283 LYDAVFADTDNS 294 (330)
Q Consensus 283 ~i~~~f~~~D~d 294 (330)
.+.-++..+..|
T Consensus 80 ~~~~~~~ia~aD 91 (111)
T cd07176 80 AFAVAVDIAAAD 91 (111)
T ss_pred HHHHHHHHHHcc
Confidence 344444444444
No 178
>PF02037 SAP: SAP domain; InterPro: IPR003034 The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA binding domain found in diverse nuclear proteins involved in chromosomal organisation [], including in apoptosis []. In yeast, SAP is found in the most distal N-terminal region of E3 SUMO-protein ligase SIZ1, where it is involved in nuclear localization [].; GO: 0003676 nucleic acid binding; PDB: 2RNN_A 1JEQ_A 2KW9_A 2KVU_A 2DO1_A 1ZBU_B 1ZBH_A 2DO5_A 2RNO_A 1H1J_S ....
Probab=22.80 E-value=2.1e+02 Score=18.43 Aligned_cols=24 Identities=17% Similarity=0.353 Sum_probs=16.3
Q ss_pred cccHHHHHHHHHhhchhcCCCCCchhHH
Q 020137 252 RMSTTIIRGFLEKNWKDIGLPPSEANEA 279 (330)
Q Consensus 252 ~Is~~ELr~~l~~~g~~~glp~~~~~~~ 279 (330)
..+..||+..+.+. |+|..+...+
T Consensus 3 ~l~v~eLk~~l~~~----gL~~~G~K~~ 26 (35)
T PF02037_consen 3 KLTVAELKEELKER----GLSTSGKKAE 26 (35)
T ss_dssp TSHHHHHHHHHHHT----TS-STSSHHH
T ss_pred cCcHHHHHHHHHHC----CCCCCCCHHH
Confidence 45778899998887 5677776433
No 179
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=21.97 E-value=33 Score=31.69 Aligned_cols=96 Identities=14% Similarity=0.184 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHhHhccCCeEEEEeechhHHHhhcChHH-------HHHHH---HHHhhhhcCC-CCCcccHHHHHH
Q 020137 82 DHASRLASDYITAIADELKDDPLVVSVLDGNTLKLFLEDEDD-------FAMLA---ENLFTDLDTE-DKGKVCKGEISN 150 (330)
Q Consensus 82 ~~f~~~l~~~l~~~a~~L~~~pivi~~~dGs~l~~fl~d~~~-------~~~~~---~~~F~~lD~d-~DG~Is~~EL~~ 150 (330)
+||-.-++|.|-.+-..|++.- .|.+.=.++.- |+.-+ .=-|-++|.. .||++|..||..
T Consensus 142 tefp~rm~dwl~~vl~~l~~r~---------el~~~~~~e~~~ea~~~d~~k~i~pv~wqf~qld~~p~d~~~sh~el~p 212 (259)
T KOG4004|consen 142 TEFPLRMRDWLKNVLVTLYERD---------ELTEKHENEKRLEAGDHDFEKYIFPVHWQFGQLDQHPIDGYLSHTELAP 212 (259)
T ss_pred HhhhHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHhhcccccccceeeeeeeeeccccCCCcccccccccccc
Confidence 5677777777777666665421 13333333322 22211 1136677754 589999999874
Q ss_pred HHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHH
Q 020137 151 ALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELL 194 (330)
Q Consensus 151 aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~ 194 (330)
.-.-+ +|..+ -....|+-.|.|+||.|+.+||..-+
T Consensus 213 l~ap~-----ipme~---c~~~f~e~cd~~nd~~ial~ew~~c~ 248 (259)
T KOG4004|consen 213 LRAPL-----IPMEH---CTTRFFETCDLDNDKYIALDEWAGCF 248 (259)
T ss_pred ccCCc-----ccHHh---hchhhhhcccCCCCCceeHHHhhccc
Confidence 22111 12111 35678899999999999999997643
No 180
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=21.62 E-value=81 Score=19.94 Aligned_cols=17 Identities=18% Similarity=0.325 Sum_probs=14.5
Q ss_pred CcccCHHHHHHHHHHHH
Q 020137 296 NVVETEDEFREHVKDIL 312 (330)
Q Consensus 296 DG~I~~eEF~~lm~eil 312 (330)
.|.||.+||.+.-..++
T Consensus 14 ~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 14 KGEISEEEYEQKKARLL 30 (31)
T ss_pred cCCCCHHHHHHHHHHHh
Confidence 58999999998887765
No 181
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=21.26 E-value=35 Score=28.21 Aligned_cols=16 Identities=6% Similarity=0.009 Sum_probs=6.8
Q ss_pred CCcccHHHHHHHHHhh
Q 020137 250 GDRMSTTIIRGFLEKN 265 (330)
Q Consensus 250 dG~Is~~ELr~~l~~~ 265 (330)
||.++.+|+..+..-+
T Consensus 37 DG~v~~~E~~~i~~~~ 52 (140)
T PF05099_consen 37 DGEVDPEEIEAIRQLL 52 (140)
T ss_dssp TSS--CHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 4555555555444333
No 182
>PF05379 Peptidase_C23: Carlavirus endopeptidase ; InterPro: IPR008041 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the MEROPS peptidase family C23 (clan CA). The type example is Carlavirus (apple stem pitting virus) endopeptidase, this thought to play a role in the post-translational cleavage of the high molecular weight primary translation products of the virus.; GO: 0003968 RNA-directed RNA polymerase activity, 0016817 hydrolase activity, acting on acid anhydrides
Probab=20.34 E-value=60 Score=25.80 Aligned_cols=47 Identities=30% Similarity=0.216 Sum_probs=25.6
Q ss_pred HHHHHHhHhccCCe----EEEEeechh-HHHhhcChHHHHHHHHHHhhhhcC
Q 020137 91 YITAIADELKDDPL----VVSVLDGNT-LKLFLEDEDDFAMLAENLFTDLDT 137 (330)
Q Consensus 91 ~l~~~a~~L~~~pi----vi~~~dGs~-l~~fl~d~~~~~~~~~~~F~~lD~ 137 (330)
++.|+|..|+|.|. |+.+--|+. +.+..+...---..+..+|+.||.
T Consensus 6 vi~AiA~aL~R~~~dVl~Vl~~~~~~~~~~~l~~G~Gl~l~~le~~f~~F~I 57 (89)
T PF05379_consen 6 VIRAIAEALGRREQDVLAVLSRKCGEELLEELWSGEGLDLEDLEELFELFDI 57 (89)
T ss_pred hhHHHHHHhCCCHHHHHHHHHhccCHHHHHHHHcCCCcCHHHHHHHHHHcCe
Confidence 57899999999995 233322333 233333333222455556665553
No 183
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=20.16 E-value=1.1e+02 Score=29.39 Aligned_cols=73 Identities=15% Similarity=0.114 Sum_probs=45.0
Q ss_pred HHHHHHHHHhhchhcCCCCCchhHHHHHHHHHHHH-hhcCCCCcccCHHHHHHHHHHHHHHHHHhhcCCCeeeec
Q 020137 255 TTIIRGFLEKNWKDIGLPPSEANEAVVLLYDAVFA-DTDNSKNVVETEDEFREHVKDILEKFAEQLDANPVYHDF 328 (330)
Q Consensus 255 ~~ELr~~l~~~g~~~glp~~~~~~~~~~~i~~~f~-~~D~d~DG~I~~eEF~~lm~eil~~~~~ql~~~pi~~~~ 328 (330)
..|||.+++.-|.-..+...++ ++....+.++|. +...---|.=...||...+++.+-.=++-|++.||.+++
T Consensus 116 rrElrkF~~~GG~v~~v~~~S~-~Ela~iY~~Lf~~Rwg~~~~~~~~l~e~f~~Lr~~~fG~vL~l~~~P~Aiql 189 (264)
T PF07395_consen 116 RRELRKFIEAGGSVRPVSEFSP-EELADIYIDLFQKRWGFRCYGKEHLAEFFSELRHMIFGSVLFLNGQPCAIQL 189 (264)
T ss_pred HHHHHHHHHcCCEEEEHHHCCH-HHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHhHHhheeeEEEECCcceEEEE
Confidence 3567766665443222222222 233344555554 445433444466788899999998889999999998875
No 184
>COG2511 GatE Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) [Translation, ribosomal structure and biogenesis]
Probab=20.11 E-value=1.1e+03 Score=25.28 Aligned_cols=96 Identities=17% Similarity=0.342 Sum_probs=58.3
Q ss_pred CCCcccHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhh
Q 020137 139 DKGKVCKGEISNALGHMGVELGVPPFSEFPQLNDILKKHGAEGEEELGQAQFAELLQQVLQDIADALAEKHIIIIQNIKI 218 (330)
Q Consensus 139 ~DG~Is~~EL~~aL~~lg~~~G~pp~~~~~~i~~i~~~~D~d~dG~I~~eEF~~~~~~il~~~a~~L~~~pv~v~~~~~~ 218 (330)
.+|.|+++-+..+|..|... |.++ ...+.+... =..++.+|-...+.++.+.-.+...+
T Consensus 533 ~~g~iake~iee~l~~l~~~----p~~~---~~e~~~~~g---L~~ls~eEve~iI~eii~~~~d~i~~----------- 591 (631)
T COG2511 533 SEGKIAKEAIEEILKALAEN----PGKD---AAEIAEKLG---LKELSEEEVEKIIDEIIESNLDVIKE----------- 591 (631)
T ss_pred hcccchHHHHHHHHHHHHhC----CCCC---HHHHHHHhc---cccCCHHHHHHHHHHHHHhhHHHHHH-----------
Confidence 46888888888888888653 4343 444555442 23578888777776654433222221
Q ss_pred ccchhhHHHhhhhhhHHHHHHHHHhhhcCCCCCcccHHHHHHHHHhh
Q 020137 219 INGSKLRMLLADELQLNGVIEKMLKEKKNLEGDRMSTTIIRGFLEKN 265 (330)
Q Consensus 219 ~dGs~~~~~l~~~~~~~~~l~~aF~~~D~D~dG~Is~~ELr~~l~~~ 265 (330)
+.......++..+...+.---||++-.+.++..+...
T Consensus 592 ----------rg~~a~g~lmg~~M~~~rg~aDgk~v~e~lr~~i~e~ 628 (631)
T COG2511 592 ----------RGMGAMGLLMGRVMAKLRGRADGKLVSEILREKLQEI 628 (631)
T ss_pred ----------hchhhHHHHHHHHHHHhhccCCcHHHHHHHHHHHHHh
Confidence 0122344556667777777778888777777766553
Done!