Query 020142
Match_columns 330
No_of_seqs 213 out of 1723
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 07:21:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020142.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020142hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 2.2E-84 4.7E-89 640.8 25.1 296 30-330 22-320 (454)
2 PLN02209 serine carboxypeptida 100.0 5.4E-72 1.2E-76 555.3 27.5 284 30-330 17-311 (437)
3 PLN03016 sinapoylglucose-malat 100.0 1.6E-71 3.5E-76 551.7 26.0 279 33-330 18-307 (433)
4 PF00450 Peptidase_S10: Serine 100.0 1.1E-71 2.4E-76 546.6 19.5 276 42-330 1-286 (415)
5 PTZ00472 serine carboxypeptida 100.0 1.3E-64 2.9E-69 506.7 26.2 263 46-330 42-324 (462)
6 COG2939 Carboxypeptidase C (ca 100.0 2.5E-50 5.4E-55 396.2 18.8 241 49-294 65-331 (498)
7 KOG1283 Serine carboxypeptidas 100.0 1.3E-43 2.8E-48 329.8 11.3 234 51-294 3-240 (414)
8 PLN02213 sinapoylglucose-malat 100.0 8E-43 1.7E-47 334.7 16.2 188 125-330 1-193 (319)
9 TIGR03611 RutD pyrimidine util 98.4 9.6E-07 2.1E-11 79.0 8.8 107 78-223 11-117 (257)
10 TIGR01250 pro_imino_pep_2 prol 98.4 1.6E-06 3.4E-11 78.6 9.2 130 52-222 3-132 (288)
11 PRK00870 haloalkane dehalogena 98.4 5.2E-06 1.1E-10 78.2 12.9 140 34-220 7-149 (302)
12 PLN02824 hydrolase, alpha/beta 98.2 8.5E-06 1.8E-10 76.3 9.8 105 80-221 29-137 (294)
13 TIGR01249 pro_imino_pep_1 prol 98.2 8.8E-06 1.9E-10 77.2 9.8 125 53-222 6-131 (306)
14 PHA02857 monoglyceride lipase; 98.2 1.1E-05 2.5E-10 74.5 10.3 126 62-224 9-135 (276)
15 TIGR03056 bchO_mg_che_rel puta 98.1 1.5E-05 3.2E-10 72.8 10.2 108 77-223 25-132 (278)
16 PRK10673 acyl-CoA esterase; Pr 98.1 8.6E-06 1.9E-10 73.9 8.2 104 75-219 11-114 (255)
17 PLN02298 hydrolase, alpha/beta 98.1 1.7E-05 3.7E-10 75.7 9.8 139 51-223 32-171 (330)
18 PF10340 DUF2424: Protein of u 98.1 7.3E-06 1.6E-10 80.3 7.2 133 65-225 105-239 (374)
19 PLN02385 hydrolase; alpha/beta 98.1 1.8E-05 3.8E-10 76.6 9.3 129 61-222 69-198 (349)
20 PF12697 Abhydrolase_6: Alpha/ 98.1 1.1E-05 2.4E-10 69.8 7.2 104 83-224 1-104 (228)
21 TIGR02240 PHA_depoly_arom poly 97.9 5.7E-05 1.2E-09 70.1 9.9 117 63-222 11-127 (276)
22 PRK03592 haloalkane dehalogena 97.9 6E-05 1.3E-09 70.6 10.0 104 80-223 27-130 (295)
23 PRK06489 hypothetical protein; 97.9 9.2E-05 2E-09 72.0 11.5 142 48-220 38-188 (360)
24 PRK11126 2-succinyl-6-hydroxy- 97.8 5.3E-05 1.1E-09 68.3 6.8 100 80-220 2-101 (242)
25 PLN02652 hydrolase; alpha/beta 97.8 0.00014 3E-09 72.2 10.1 130 61-224 118-248 (395)
26 COG1506 DAP2 Dipeptidyl aminop 97.8 6.2E-05 1.4E-09 78.8 7.6 143 55-226 367-512 (620)
27 PLN02894 hydrolase, alpha/beta 97.7 0.00015 3.3E-09 71.9 9.8 108 78-221 103-211 (402)
28 TIGR03695 menH_SHCHC 2-succiny 97.7 0.00012 2.6E-09 64.3 8.1 105 80-221 1-105 (251)
29 TIGR02427 protocat_pcaD 3-oxoa 97.7 0.00015 3.2E-09 64.0 8.7 89 78-196 11-99 (251)
30 PRK03204 haloalkane dehalogena 97.7 0.00022 4.8E-09 67.0 10.3 122 52-221 15-136 (286)
31 TIGR03343 biphenyl_bphD 2-hydr 97.7 0.00017 3.8E-09 66.4 9.1 106 79-219 29-134 (282)
32 PLN03084 alpha/beta hydrolase 97.7 0.00039 8.5E-09 68.8 11.4 132 48-222 101-233 (383)
33 PRK10749 lysophospholipase L2; 97.6 0.00025 5.4E-09 68.2 9.3 126 62-222 39-167 (330)
34 KOG4409 Predicted hydrolase/ac 97.5 0.00049 1.1E-08 66.6 9.7 135 50-224 64-198 (365)
35 PLN02578 hydrolase 97.5 0.00024 5.2E-09 69.0 7.8 101 80-220 86-186 (354)
36 PRK05077 frsA fermentation/res 97.5 0.00067 1.4E-08 67.8 11.1 131 55-223 170-302 (414)
37 PLN02679 hydrolase, alpha/beta 97.5 0.00059 1.3E-08 66.5 10.4 104 79-220 87-190 (360)
38 PRK14875 acetoin dehydrogenase 97.5 0.00056 1.2E-08 65.8 9.9 103 78-220 129-231 (371)
39 PRK10349 carboxylesterase BioH 97.5 0.00019 4.2E-09 65.6 5.7 94 81-219 14-107 (256)
40 PLN02965 Probable pheophorbida 97.4 0.00048 1E-08 63.2 7.5 99 83-220 6-106 (255)
41 TIGR03101 hydr2_PEP hydrolase, 97.4 0.00055 1.2E-08 64.5 7.6 133 63-229 9-142 (266)
42 PLN02211 methyl indole-3-aceta 97.4 0.001 2.2E-08 62.4 9.4 106 78-220 16-121 (273)
43 TIGR01840 esterase_phb esteras 97.4 0.00093 2E-08 60.0 8.7 117 77-221 10-130 (212)
44 PLN03087 BODYGUARD 1 domain co 97.4 0.0016 3.5E-08 66.3 11.3 134 50-220 175-308 (481)
45 TIGR01738 bioH putative pimelo 97.3 0.00034 7.3E-09 61.6 5.3 96 80-220 4-99 (245)
46 PRK05855 short chain dehydroge 97.2 0.0017 3.7E-08 66.1 9.2 98 62-190 11-108 (582)
47 TIGR01607 PST-A Plasmodium sub 97.1 0.0045 9.7E-08 59.8 11.1 152 62-222 6-186 (332)
48 PLN02980 2-oxoglutarate decarb 97.0 0.0029 6.2E-08 73.3 10.3 107 77-220 1368-1479(1655)
49 PRK08775 homoserine O-acetyltr 97.0 0.0028 6.1E-08 61.1 8.7 76 124-222 98-174 (343)
50 COG0596 MhpC Predicted hydrola 97.0 0.0034 7.5E-08 54.2 8.2 104 80-222 21-124 (282)
51 PLN02511 hydrolase 97.0 0.0052 1.1E-07 60.7 10.3 114 54-194 74-191 (388)
52 TIGR02821 fghA_ester_D S-formy 96.9 0.0086 1.9E-07 56.1 11.1 42 173-224 135-176 (275)
53 PRK10566 esterase; Provisional 96.9 0.0037 7.9E-08 56.8 8.4 106 68-195 15-126 (249)
54 COG2267 PldB Lysophospholipase 96.9 0.0075 1.6E-07 57.7 10.7 129 61-224 17-145 (298)
55 PRK10985 putative hydrolase; P 96.9 0.0051 1.1E-07 59.0 9.6 109 63-195 41-150 (324)
56 PF00561 Abhydrolase_1: alpha/ 96.9 0.0019 4.2E-08 56.7 5.9 77 127-220 2-78 (230)
57 KOG1455 Lysophospholipase [Lip 96.8 0.014 3.1E-07 55.6 10.8 128 62-220 36-163 (313)
58 KOG1515 Arylacetamide deacetyl 96.8 0.019 4.1E-07 56.0 11.9 139 61-225 69-211 (336)
59 PLN02442 S-formylglutathione h 96.7 0.02 4.3E-07 54.0 11.7 56 156-224 126-181 (283)
60 PRK07581 hypothetical protein; 96.6 0.0085 1.8E-07 57.4 8.0 83 124-220 70-158 (339)
61 TIGR03100 hydr1_PEP hydrolase, 96.5 0.032 7E-07 52.2 11.2 79 126-223 58-136 (274)
62 KOG4178 Soluble epoxide hydrol 96.4 0.043 9.3E-07 52.9 11.8 138 49-226 20-158 (322)
63 cd00707 Pancreat_lipase_like P 96.3 0.0033 7.2E-08 59.3 3.6 113 77-220 33-146 (275)
64 PRK10115 protease 2; Provision 96.3 0.03 6.6E-07 59.5 10.9 144 54-226 417-564 (686)
65 PRK00175 metX homoserine O-ace 96.2 0.042 9.1E-07 53.9 10.8 137 63-221 32-182 (379)
66 PF00326 Peptidase_S9: Prolyl 96.2 0.0098 2.1E-07 53.0 5.7 116 125-251 14-135 (213)
67 KOG2564 Predicted acetyltransf 96.2 0.0091 2E-07 56.4 5.5 108 77-218 71-179 (343)
68 PRK10162 acetyl esterase; Prov 96.0 0.029 6.2E-07 53.9 8.1 63 157-224 136-198 (318)
69 PF00975 Thioesterase: Thioest 95.9 0.037 8E-07 49.5 8.4 103 81-220 1-103 (229)
70 KOG4391 Predicted alpha/beta h 95.8 0.055 1.2E-06 49.6 8.8 131 55-223 56-186 (300)
71 TIGR00976 /NonD putative hydro 95.7 0.033 7.2E-07 57.5 8.1 130 62-224 5-135 (550)
72 COG3509 LpqC Poly(3-hydroxybut 95.7 0.17 3.8E-06 48.2 12.0 110 63-196 44-164 (312)
73 TIGR03230 lipo_lipase lipoprot 95.4 0.051 1.1E-06 54.9 7.7 81 125-220 73-153 (442)
74 TIGR01392 homoserO_Ac_trn homo 95.3 0.15 3.2E-06 49.3 10.4 135 62-221 14-162 (351)
75 PLN00021 chlorophyllase 95.3 0.081 1.8E-06 51.0 8.4 115 77-222 49-167 (313)
76 PF10230 DUF2305: Uncharacteri 95.2 0.14 3E-06 48.1 9.7 118 80-223 2-124 (266)
77 PF06500 DUF1100: Alpha/beta h 95.1 0.013 2.9E-07 58.3 2.4 80 126-223 219-298 (411)
78 KOG1838 Alpha/beta hydrolase [ 94.8 0.24 5.1E-06 49.4 10.2 110 77-221 122-236 (409)
79 KOG1454 Predicted hydrolase/ac 94.7 0.16 3.5E-06 49.2 8.7 96 78-200 56-152 (326)
80 COG0657 Aes Esterase/lipase [L 94.4 0.27 5.9E-06 46.6 9.6 52 175-232 151-202 (312)
81 PF10503 Esterase_phd: Esteras 94.4 0.2 4.3E-06 46.0 8.2 50 162-221 83-132 (220)
82 PF12695 Abhydrolase_5: Alpha/ 94.1 0.1 2.3E-06 42.6 5.3 93 82-220 1-94 (145)
83 PF05577 Peptidase_S28: Serine 93.9 0.19 4.2E-06 50.2 7.6 98 125-233 59-160 (434)
84 PRK11460 putative hydrolase; P 93.7 0.4 8.7E-06 43.8 8.8 36 159-195 87-122 (232)
85 cd00312 Esterase_lipase Estera 93.2 0.32 6.9E-06 49.2 8.0 38 156-194 157-194 (493)
86 PF02230 Abhydrolase_2: Phosph 93.0 0.17 3.8E-06 45.4 5.2 72 156-239 87-164 (216)
87 PF07859 Abhydrolase_3: alpha/ 92.8 0.19 4.2E-06 44.2 5.1 89 154-249 47-141 (211)
88 PLN02454 triacylglycerol lipas 92.6 0.36 7.9E-06 48.2 7.2 68 153-223 206-273 (414)
89 PRK11071 esterase YqiA; Provis 92.4 0.21 4.6E-06 44.3 4.8 48 160-223 48-95 (190)
90 KOG2100 Dipeptidyl aminopeptid 91.8 0.27 5.8E-06 53.0 5.6 152 65-244 509-665 (755)
91 PF01764 Lipase_3: Lipase (cla 91.5 0.45 9.7E-06 39.2 5.6 62 154-221 45-106 (140)
92 PLN02872 triacylglycerol lipas 91.3 0.92 2E-05 45.2 8.4 123 48-190 41-174 (395)
93 cd00519 Lipase_3 Lipase (class 91.2 0.55 1.2E-05 42.5 6.3 58 156-221 111-168 (229)
94 cd00741 Lipase Lipase. Lipase 91.1 0.68 1.5E-05 39.1 6.4 58 155-220 10-67 (153)
95 PF05990 DUF900: Alpha/beta hy 90.9 0.39 8.5E-06 44.2 5.0 66 156-225 76-141 (233)
96 COG4099 Predicted peptidase [G 90.7 3.1 6.7E-05 40.1 10.8 38 161-198 254-291 (387)
97 PRK05371 x-prolyl-dipeptidyl a 90.3 0.73 1.6E-05 49.8 7.1 82 125-222 279-374 (767)
98 PF02129 Peptidase_S15: X-Pro 88.8 0.48 1E-05 44.2 3.9 83 126-225 58-140 (272)
99 PLN02571 triacylglycerol lipas 88.8 1.5 3.2E-05 44.0 7.5 68 154-222 205-276 (413)
100 TIGR03502 lipase_Pla1_cef extr 87.6 2 4.3E-05 46.5 8.0 99 79-196 448-575 (792)
101 PRK10252 entF enterobactin syn 87.4 3.1 6.8E-05 47.0 10.0 102 80-219 1068-1169(1296)
102 PF06057 VirJ: Bacterial virul 86.9 1.1 2.4E-05 40.2 4.9 63 150-221 45-107 (192)
103 COG0400 Predicted esterase [Ge 86.7 3.6 7.7E-05 37.4 8.1 97 134-241 58-157 (207)
104 PF05677 DUF818: Chlamydia CHL 86.2 1.5 3.2E-05 42.9 5.6 93 75-192 132-231 (365)
105 PF05728 UPF0227: Uncharacteri 85.6 1.4 3E-05 39.3 4.9 44 174-230 57-100 (187)
106 PRK13604 luxD acyl transferase 85.5 8.8 0.00019 37.1 10.5 124 62-222 18-142 (307)
107 PRK06765 homoserine O-acetyltr 85.4 1.3 2.8E-05 44.0 5.0 53 150-219 141-194 (389)
108 KOG1552 Predicted alpha/beta h 85.3 6 0.00013 37.2 8.9 110 76-224 56-166 (258)
109 KOG3975 Uncharacterized conser 85.2 3.9 8.5E-05 38.4 7.6 118 65-201 14-131 (301)
110 PLN02733 phosphatidylcholine-s 84.5 2.1 4.6E-05 43.3 6.0 40 153-195 142-181 (440)
111 PF11288 DUF3089: Protein of u 84.3 1.5 3.2E-05 39.9 4.4 42 156-199 77-118 (207)
112 PF11144 DUF2920: Protein of u 84.1 2.2 4.7E-05 42.6 5.8 60 154-223 161-221 (403)
113 PLN02753 triacylglycerol lipas 83.9 3.4 7.5E-05 42.5 7.2 71 152-222 286-360 (531)
114 PLN02719 triacylglycerol lipas 83.8 3.5 7.6E-05 42.4 7.3 69 153-221 273-345 (518)
115 KOG2183 Prolylcarboxypeptidase 81.7 2.1 4.6E-05 42.8 4.6 65 125-191 111-182 (492)
116 smart00824 PKS_TE Thioesterase 81.1 5.8 0.00013 33.8 6.9 76 125-219 25-100 (212)
117 PLN02324 triacylglycerol lipas 80.6 6 0.00013 39.7 7.4 68 153-221 193-265 (415)
118 PLN02761 lipase class 3 family 78.6 7.1 0.00015 40.3 7.3 69 153-221 268-342 (527)
119 PRK10439 enterobactin/ferric e 78.1 8.9 0.00019 38.4 7.9 36 176-221 288-323 (411)
120 PHA00007 E cell lysis protein 78.0 2.8 6.1E-05 32.1 3.2 26 1-26 1-26 (91)
121 KOG3101 Esterase D [General fu 76.2 20 0.00043 33.1 8.7 143 77-250 41-204 (283)
122 PRK14566 triosephosphate isome 76.0 6.7 0.00015 36.9 6.0 61 153-224 188-248 (260)
123 PF03283 PAE: Pectinacetyleste 74.6 28 0.0006 34.3 10.2 147 66-222 37-198 (361)
124 PLN02802 triacylglycerol lipas 74.6 7.6 0.00017 39.9 6.3 63 154-221 309-371 (509)
125 PF08237 PE-PPE: PE-PPE domain 74.3 9.7 0.00021 35.0 6.5 63 150-220 27-89 (225)
126 PLN02408 phospholipase A1 73.9 8.9 0.00019 37.9 6.5 63 154-221 179-241 (365)
127 KOG4569 Predicted lipase [Lipi 73.9 7.6 0.00016 37.8 6.0 59 157-221 155-213 (336)
128 COG3319 Thioesterase domains o 73.8 31 0.00067 32.4 9.8 104 81-222 1-104 (257)
129 PF05448 AXE1: Acetyl xylan es 73.8 16 0.00035 35.3 8.2 47 165-222 164-210 (320)
130 PRK04940 hypothetical protein; 73.5 6.4 0.00014 35.0 4.9 42 176-230 60-101 (180)
131 PF11187 DUF2974: Protein of u 73.1 8.2 0.00018 35.4 5.7 39 158-200 70-108 (224)
132 PRK14567 triosephosphate isome 72.0 10 0.00023 35.5 6.2 61 153-224 178-238 (253)
133 PLN02847 triacylglycerol lipas 72.0 7.7 0.00017 40.7 5.7 52 159-218 237-288 (633)
134 PLN02310 triacylglycerol lipas 71.1 12 0.00025 37.6 6.6 63 155-222 187-250 (405)
135 KOG4627 Kynurenine formamidase 70.4 6.2 0.00013 36.2 4.1 72 136-222 102-173 (270)
136 PLN02934 triacylglycerol lipas 70.4 11 0.00025 38.7 6.4 40 158-200 306-345 (515)
137 PLN00413 triacylglycerol lipas 70.3 5.4 0.00012 40.7 4.1 39 158-199 269-307 (479)
138 PF05057 DUF676: Putative seri 70.1 6.6 0.00014 35.5 4.4 50 151-201 54-103 (217)
139 COG2272 PnbA Carboxylesterase 68.4 21 0.00045 36.6 7.7 32 161-193 166-197 (491)
140 PF08538 DUF1749: Protein of u 68.3 10 0.00023 36.5 5.4 73 151-228 82-155 (303)
141 COG0627 Predicted esterase [Ge 68.0 15 0.00032 35.6 6.4 112 79-196 52-172 (316)
142 PF06342 DUF1057: Alpha/beta h 68.0 63 0.0014 31.0 10.4 103 77-220 32-136 (297)
143 COG0429 Predicted hydrolase of 67.4 58 0.0013 31.9 10.3 122 65-220 62-185 (345)
144 PF00151 Lipase: Lipase; Inte 67.4 1.2 2.6E-05 43.4 -1.2 103 77-199 68-173 (331)
145 PLN02162 triacylglycerol lipas 67.1 8.2 0.00018 39.3 4.6 40 158-200 263-302 (475)
146 PF07819 PGAP1: PGAP1-like pro 65.4 21 0.00046 32.5 6.7 66 154-226 61-129 (225)
147 KOG2984 Predicted hydrolase [G 64.9 4.5 9.8E-05 37.0 2.1 90 81-197 43-135 (277)
148 TIGR01836 PHA_synth_III_C poly 63.2 11 0.00023 36.3 4.6 78 126-223 95-173 (350)
149 PLN03037 lipase class 3 family 62.2 22 0.00049 36.7 6.7 62 156-221 297-359 (525)
150 PF07519 Tannase: Tannase and 61.0 27 0.00059 35.7 7.2 80 161-254 104-192 (474)
151 PF06259 Abhydrolase_8: Alpha/ 60.0 14 0.00031 32.7 4.3 65 124-196 62-129 (177)
152 COG3208 GrsT Predicted thioest 56.6 17 0.00037 33.9 4.4 64 127-200 35-98 (244)
153 PF00681 Plectin: Plectin repe 56.6 7.5 0.00016 26.3 1.6 32 219-250 12-43 (45)
154 PLN02429 triosephosphate isome 56.6 27 0.00059 33.9 5.9 61 153-224 238-299 (315)
155 PF10081 Abhydrolase_9: Alpha/ 53.5 19 0.00041 34.4 4.3 36 153-188 86-121 (289)
156 TIGR01838 PHA_synth_I poly(R)- 53.2 59 0.0013 33.8 8.2 85 126-224 221-305 (532)
157 PLN02561 triosephosphate isome 52.5 33 0.00071 32.2 5.7 60 153-223 179-239 (253)
158 COG2945 Predicted hydrolase of 51.9 17 0.00036 33.0 3.4 58 135-199 69-126 (210)
159 cd00311 TIM Triosephosphate is 51.8 41 0.00089 31.3 6.2 59 154-224 176-235 (242)
160 PF12740 Chlorophyllase2: Chlo 51.4 29 0.00063 32.7 5.1 63 152-221 63-131 (259)
161 PF12146 Hydrolase_4: Putative 51.2 63 0.0014 24.4 6.1 78 64-164 2-79 (79)
162 COG4782 Uncharacterized protei 50.4 25 0.00055 34.7 4.6 49 175-225 190-238 (377)
163 PF08840 BAAT_C: BAAT / Acyl-C 48.7 21 0.00045 32.2 3.6 35 164-198 10-44 (213)
164 KOG2281 Dipeptidyl aminopeptid 48.7 62 0.0013 34.6 7.3 120 78-232 640-773 (867)
165 COG4757 Predicted alpha/beta h 45.9 35 0.00075 32.0 4.6 66 126-195 58-124 (281)
166 PRK00042 tpiA triosephosphate 44.9 62 0.0013 30.3 6.2 60 153-224 179-239 (250)
167 KOG3079 Uridylate kinase/adeny 44.1 13 0.00028 33.4 1.5 16 78-93 5-20 (195)
168 KOG2382 Predicted alpha/beta h 43.7 26 0.00057 33.9 3.6 90 73-187 45-134 (315)
169 PF02450 LCAT: Lecithin:choles 42.5 22 0.00047 35.3 3.0 39 155-197 102-140 (389)
170 PF01083 Cutinase: Cutinase; 42.1 29 0.00063 30.5 3.4 78 131-223 45-125 (179)
171 COG0218 Predicted GTPase [Gene 42.0 49 0.0011 30.0 4.9 61 77-141 20-84 (200)
172 PRK14565 triosephosphate isome 41.8 53 0.0011 30.5 5.2 54 153-225 173-226 (237)
173 PF03583 LIP: Secretory lipase 41.8 81 0.0018 29.8 6.7 66 153-223 45-115 (290)
174 KOG3724 Negative regulator of 41.6 27 0.00059 37.9 3.6 40 151-190 151-196 (973)
175 PTZ00333 triosephosphate isome 40.4 64 0.0014 30.2 5.6 60 153-223 182-242 (255)
176 PRK13962 bifunctional phosphog 39.8 55 0.0012 34.9 5.6 61 153-224 574-635 (645)
177 PF03403 PAF-AH_p_II: Platelet 39.7 22 0.00047 35.2 2.5 38 177-225 229-266 (379)
178 KOG3877 NADH:ubiquinone oxidor 39.5 26 0.00056 33.7 2.8 51 122-189 67-117 (393)
179 KOG2182 Hydrolytic enzymes of 38.6 64 0.0014 33.2 5.6 42 150-191 146-187 (514)
180 TIGR03712 acc_sec_asp2 accesso 37.0 71 0.0015 32.9 5.6 113 65-223 277-392 (511)
181 PF06028 DUF915: Alpha/beta hy 37.0 75 0.0016 29.7 5.5 62 152-220 82-143 (255)
182 PF06821 Ser_hydrolase: Serine 36.5 31 0.00068 30.0 2.7 39 175-222 54-92 (171)
183 KOG1516 Carboxylesterase and r 34.7 2.2E+02 0.0048 29.0 9.1 33 160-193 180-212 (545)
184 PF00756 Esterase: Putative es 34.5 17 0.00037 32.7 0.7 37 178-224 117-153 (251)
185 PF12273 RCR: Chitin synthesis 33.8 40 0.00087 27.9 2.9 12 3-14 1-12 (130)
186 KOG1553 Predicted alpha/beta h 33.6 74 0.0016 31.6 4.9 57 148-219 287-343 (517)
187 PF09292 Neil1-DNA_bind: Endon 33.5 25 0.00054 23.1 1.1 11 81-91 25-35 (39)
188 PF04414 tRNA_deacylase: D-ami 33.4 88 0.0019 28.6 5.2 48 150-200 104-152 (213)
189 COG3673 Uncharacterized conser 33.2 30 0.00065 33.8 2.2 68 125-197 65-143 (423)
190 COG4425 Predicted membrane pro 32.1 60 0.0013 33.2 4.1 36 153-188 374-409 (588)
191 COG0412 Dienelactone hydrolase 31.5 67 0.0015 29.4 4.2 43 153-196 90-132 (236)
192 PRK15492 triosephosphate isome 31.1 1.1E+02 0.0024 28.8 5.5 60 153-224 188-248 (260)
193 COG3571 Predicted hydrolase of 30.8 62 0.0014 28.7 3.5 28 172-199 85-112 (213)
194 PF01555 N6_N4_Mtase: DNA meth 30.5 52 0.0011 28.7 3.2 58 127-187 2-62 (231)
195 PF05277 DUF726: Protein of un 30.4 1.6E+02 0.0034 29.0 6.7 56 161-221 206-261 (345)
196 PF05049 IIGP: Interferon-indu 30.2 30 0.00064 34.4 1.7 59 78-138 32-97 (376)
197 PF03959 FSH1: Serine hydrolas 30.0 1E+02 0.0022 27.5 5.1 66 154-225 84-149 (212)
198 COG1075 LipA Predicted acetylt 28.8 82 0.0018 30.5 4.5 45 151-198 105-149 (336)
199 COG2819 Predicted hydrolase of 28.7 62 0.0013 30.6 3.4 56 156-221 113-172 (264)
200 PRK03995 hypothetical protein; 28.4 1E+02 0.0022 29.2 4.8 48 150-200 156-203 (267)
201 KOG3967 Uncharacterized conser 28.4 1.5E+02 0.0032 27.6 5.6 24 174-197 188-211 (297)
202 KOG2369 Lecithin:cholesterol a 28.0 58 0.0012 33.3 3.3 44 154-197 159-203 (473)
203 KOG2541 Palmitoyl protein thio 27.8 1.7E+02 0.0037 28.0 6.1 92 77-199 21-115 (296)
204 COG3545 Predicted esterase of 27.6 70 0.0015 28.5 3.3 36 175-220 58-93 (181)
205 TIGR00419 tim triosephosphate 27.2 1.3E+02 0.0029 27.2 5.2 54 154-223 151-204 (205)
206 PF00135 COesterase: Carboxyle 26.9 54 0.0012 32.9 2.9 50 161-219 194-243 (535)
207 PRK06762 hypothetical protein; 26.7 39 0.00085 28.5 1.6 13 81-93 2-14 (166)
208 PF05576 Peptidase_S37: PS-10 26.6 3E+02 0.0064 28.0 7.8 89 76-189 59-147 (448)
209 COG1647 Esterase/lipase [Gener 26.4 1.6E+02 0.0034 27.5 5.5 55 154-227 70-124 (243)
210 COG3946 VirJ Type IV secretory 26.2 92 0.002 31.4 4.2 48 150-200 303-350 (456)
211 PLN02517 phosphatidylcholine-s 25.9 57 0.0012 34.5 2.9 22 175-196 212-233 (642)
212 PF01583 APS_kinase: Adenylyls 25.7 41 0.00089 29.2 1.6 14 80-93 1-14 (156)
213 PF06309 Torsin: Torsin; Inte 25.1 60 0.0013 27.3 2.4 17 77-93 49-65 (127)
214 PF01738 DLH: Dienelactone hyd 24.3 58 0.0012 28.7 2.3 40 154-194 77-116 (218)
215 PF00121 TIM: Triosephosphate 23.9 35 0.00075 31.8 0.8 60 153-224 177-238 (244)
216 COG3596 Predicted GTPase [Gene 22.2 1.2E+02 0.0025 29.2 3.9 62 78-142 36-102 (296)
217 PF15169 DUF4564: Domain of un 22.0 80 0.0017 28.3 2.7 44 125-171 122-165 (187)
218 KOG1643 Triosephosphate isomer 21.9 1.2E+02 0.0027 27.7 3.8 60 153-224 177-238 (247)
219 PF14020 DUF4236: Protein of u 21.4 74 0.0016 22.7 1.9 13 129-142 42-54 (55)
220 KOG2565 Predicted hydrolases o 21.1 1.2E+02 0.0026 30.4 3.9 100 80-199 153-252 (469)
221 PRK11524 putative methyltransf 20.4 2.5E+02 0.0055 26.3 6.0 51 125-181 27-79 (284)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-84 Score=640.81 Aligned_cols=296 Identities=44% Similarity=0.800 Sum_probs=263.1
Q ss_pred ccCCCCCccccCCCCCC-CCceeEEEEEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCcee
Q 020142 30 AAFPAEDLVVSLPGQPK-VAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYP 108 (330)
Q Consensus 30 ~~~~~~~~v~~Lpg~~~-~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~ 108 (330)
.+.+++++|++|||++. +++++|||||+|++..+++|||||+||+++|+++||||||||||||||+. |+|.|+|||++
T Consensus 22 ~~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v 100 (454)
T KOG1282|consen 22 HHVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRV 100 (454)
T ss_pred cccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEE
Confidence 46688899999999985 89999999999999889999999999999999999999999999999996 99999999999
Q ss_pred cCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccc
Q 020142 109 RGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGH 188 (330)
Q Consensus 109 ~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 188 (330)
+.+|.+|+.||||||+.||||||||||||||||+++.+++.++|+.+|+|++.||++||++||||++++|||+|||||||
T Consensus 101 ~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~ 180 (454)
T KOG1282|consen 101 KYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGH 180 (454)
T ss_pred cCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccce
Confidence 99999999999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccccchhHHHHhhhcCCCChHHHHHHHhhCCccccccCCCCCChhH
Q 020142 189 YIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNMTNS 268 (330)
Q Consensus 189 yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~~~~~~ 268 (330)
|||+||++|.++|+....+.|||||++||||++|+..|..++.+|+|.||+|++++++.+++.|+............+.+
T Consensus 181 YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~ 260 (454)
T KOG1282|consen 181 YVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTK 260 (454)
T ss_pred ehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhH
Confidence 99999999999997544578999999999999999999999999999999999999999999999853211122344789
Q ss_pred HHHHHHHHHHHhCCCCccccccCCCCCCchHHHHHHHhhhhhccCCCccch--hhhhccCccCC
Q 020142 269 CIEAITEANKIVGDYINNYDVILDVCYPTIVEQELRLRKMVYIMFFSHCFD--AILLLNLCNLQ 330 (330)
Q Consensus 269 C~~~~~~~~~~~~~~iN~YdI~~~~C~~~~~~~~~~~~~~~~~~~~~pC~d--~~~YLNrpdVq 330 (330)
|..+++.+......++|.|+|+.++|.+.... + +..+....+++|.+ .++||||||||
T Consensus 261 C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~---~-~~~~~~~~~~~c~~~~~~~ylN~~~Vr 320 (454)
T KOG1282|consen 261 CNKAVEEFDSKTTGDIDNYYILTPDCYPTSYE---L-KKPTDCYGYDPCLSDYAEKYLNRPEVR 320 (454)
T ss_pred HHHHHHHHHHHHhccCchhhhcchhhcccccc---c-cccccccccCCchhhhHHHhcCCHHHH
Confidence 99999988634445899999999999762111 0 11122356799987 88899999997
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=5.4e-72 Score=555.33 Aligned_cols=284 Identities=27% Similarity=0.563 Sum_probs=242.5
Q ss_pred ccCCCCCccccCCCCC-CCCceeEEEEEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCcee
Q 020142 30 AAFPAEDLVVSLPGQP-KVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYP 108 (330)
Q Consensus 30 ~~~~~~~~v~~Lpg~~-~~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~ 108 (330)
.++++.|+|++|||++ .++++++|||++|+++.++++||||||++++|+++|++|||||||||||+ .|+|.|+|||++
T Consensus 17 ~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~ 95 (437)
T PLN02209 17 HHVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLAL 95 (437)
T ss_pred ccCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCcee
Confidence 4567889999999984 58899999999999877889999999999999999999999999999999 699999999999
Q ss_pred cCCC-----CCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcc
Q 020142 109 RGDG-----RGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGE 183 (330)
Q Consensus 109 ~~~~-----~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GE 183 (330)
+.++ .++++||+||++.|||||||||+||||||+.....+ .+++++|+|+++||+.||++||+|+++|+||+||
T Consensus 96 ~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GE 174 (437)
T PLN02209 96 KNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGD 174 (437)
T ss_pred ccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEec
Confidence 8663 378999999999999999999999999998765444 4566788999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccccchhHHHHhhhcCCCChHHHHHHHhhCCccccccCCCC
Q 020142 184 SYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSH 263 (330)
Q Consensus 184 SYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~ 263 (330)
||||||||.+|++|.++|++..+++||||||+||||++||..|..++++|++.||+|++++++++++.|...... ..
T Consensus 175 SYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~---~~ 251 (437)
T PLN02209 175 SYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFS---VD 251 (437)
T ss_pred CcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhccccccc---CC
Confidence 999999999999999988654456899999999999999999999999999999999999999999999753111 12
Q ss_pred CChhHHHHHHHHHHHHhCCCCccccccCCCCCCchHHHHHHHhhhhhccCCCccch-----hhhhccCccCC
Q 020142 264 NMTNSCIEAITEANKIVGDYINNYDVILDVCYPTIVEQELRLRKMVYIMFFSHCFD-----AILLLNLCNLQ 330 (330)
Q Consensus 264 ~~~~~C~~~~~~~~~~~~~~iN~YdI~~~~C~~~~~~~~~~~~~~~~~~~~~pC~d-----~~~YLNrpdVq 330 (330)
..+..|..++..+... ...+|.|++..+.|..... ....++|.+ ++.|||+|+||
T Consensus 252 ~~~~~C~~~i~~~~~~-~~~~~~~~~~~~~c~~~~~-----------~~~~~~c~~~~~~~~~~ylN~~~V~ 311 (437)
T PLN02209 252 PSNKKCLKLVEEYHKC-TDNINSHHTLIANCDDSNT-----------QHISPDCYYYPYHLVECWANNESVR 311 (437)
T ss_pred CChHHHHHHHHHHHHH-hhcCCcccccccccccccc-----------ccCCCCcccccHHHHHHHhCCHHHH
Confidence 3467899887776433 3568999877667864211 012345742 78899999987
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=1.6e-71 Score=551.66 Aligned_cols=279 Identities=30% Similarity=0.567 Sum_probs=239.4
Q ss_pred CCCCccccCCCCC-CCCceeEEEEEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCC
Q 020142 33 PAEDLVVSLPGQP-KVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGD 111 (330)
Q Consensus 33 ~~~~~v~~Lpg~~-~~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~ 111 (330)
.+.+.|++|||+. .++++++|||++|+++.++++|||||||+++|+++|+||||||||||||+ .|+|.|+|||+++.+
T Consensus 18 ~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~ 96 (433)
T PLN03016 18 DSASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFE 96 (433)
T ss_pred cccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeecc
Confidence 5568899999984 58899999999998877789999999999999999999999999999999 699999999998643
Q ss_pred -----CCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccc
Q 020142 112 -----GRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYA 186 (330)
Q Consensus 112 -----~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYg 186 (330)
+.++++|++||++.|||||||||+||||||+.....+ .+++++|++++.||++||++||+|+++|+||+|||||
T Consensus 97 ~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 97 VFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred ccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 3478999999999999999999999999998765543 4566778999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccccchhHHHHhhhcCCCChHHHHHHHhhCCccccccCCCCCCh
Q 020142 187 GHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNMT 266 (330)
Q Consensus 187 G~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~~~~ 266 (330)
|||||.+|++|.++|++..+++||||||+||||++||..|..++.+|++.||+|++++++++++.|+..... ....+
T Consensus 176 G~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~---~~~~~ 252 (433)
T PLN03016 176 GMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYN---VDPSN 252 (433)
T ss_pred ceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhcccccc---CCCch
Confidence 999999999999988654456899999999999999999999999999999999999999999999753111 12457
Q ss_pred hHHHHHHHHHHHHhCCCCccccccCCCCCCchHHHHHHHhhhhhccCCCccch-----hhhhccCccCC
Q 020142 267 NSCIEAITEANKIVGDYINNYDVILDVCYPTIVEQELRLRKMVYIMFFSHCFD-----AILLLNLCNLQ 330 (330)
Q Consensus 267 ~~C~~~~~~~~~~~~~~iN~YdI~~~~C~~~~~~~~~~~~~~~~~~~~~pC~d-----~~~YLNrpdVq 330 (330)
..|..++..+... .+.+|+|||+.+.|.... ...+.|.+ +++|||+|+||
T Consensus 253 ~~C~~~~~~~~~~-~~~~n~yni~~~~~~~~~-------------~~~~~c~~~~~~~~~~ylN~~~V~ 307 (433)
T PLN03016 253 TQCLKLTEEYHKC-TAKINIHHILTPDCDVTN-------------VTSPDCYYYPYHLIECWANDESVR 307 (433)
T ss_pred HHHHHHHHHHHHH-hcCCChhhccCCcccccc-------------cCCCcccccchHHHHHHhCCHHHH
Confidence 7899988876443 467999999977674211 01245753 78899999986
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1.1e-71 Score=546.57 Aligned_cols=276 Identities=37% Similarity=0.667 Sum_probs=224.1
Q ss_pred CCCCC-CCceeEEEEEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCC-CCccccC
Q 020142 42 PGQPK-VAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDG-RGLRRNS 119 (330)
Q Consensus 42 pg~~~-~~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~-~~~~~n~ 119 (330)
||... +++++|||||+|+++.+++|||||||++++++++||||||||||||||+ .|+|.|+|||++++++ .++++||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 77654 8899999999999878899999999999999999999999999999999 5999999999999554 7899999
Q ss_pred CccccccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHH
Q 020142 120 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 199 (330)
Q Consensus 120 ~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (330)
+||+++||||||||||||||||+.+...+..+++++|+|+++||++||.+||+++++|+||+||||||||||.+|.+|++
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~ 159 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQ 159 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhh
Confidence 99999999999999999999999887767789999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCceeeeeEEEecCCCCCccccchhHHHHhhhcCCCChHHHHHHHhhCCccccccCCCCCChhHHHHHHHHHHHH
Q 020142 200 HNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKI 279 (330)
Q Consensus 200 ~n~~~~~~~inLkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~~~~~~C~~~~~~~~~~ 279 (330)
++.....+.||||||+||||++||..|..++.+|++.||+|++++++.+.+.|.... .+......|..++..+...
T Consensus 160 ~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~----~~~~~~~~c~~~~~~~~~~ 235 (415)
T PF00450_consen 160 QNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACP----QCQKAITECAAALDELSCQ 235 (415)
T ss_dssp HTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSH----SSSCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccc----cccchhhHHHHHHHhhhhh
Confidence 997655578999999999999999999999999999999999999999999997531 1235678999888877542
Q ss_pred -----hCCCCccccccCCCCCCchHHHHHHHhhhhhccCCCccch---hhhhccCccCC
Q 020142 280 -----VGDYINNYDVILDVCYPTIVEQELRLRKMVYIMFFSHCFD---AILLLNLCNLQ 330 (330)
Q Consensus 280 -----~~~~iN~YdI~~~~C~~~~~~~~~~~~~~~~~~~~~pC~d---~~~YLNrpdVq 330 (330)
..+++|+|||+.++|..+. .........+|.+ ++.|||+++||
T Consensus 236 ~~~~~~~~~~n~Ydi~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~yln~~~Vr 286 (415)
T PF00450_consen 236 YAISQCNGGINPYDIRQPCYNPSR--------SSYDNSPSNDPPDDDYLEAYLNRPDVR 286 (415)
T ss_dssp CHHHHHHTTSETTSTTSEETT-SH--------CTTCCCCTTTTTCHHHHHHHHTSHHHH
T ss_pred cccccccCCcceeeeecccccccc--------ccccccccccccchhhHHHHhccHHHH
Confidence 2358999999987442110 0000012233433 88999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.3e-64 Score=506.69 Aligned_cols=263 Identities=29% Similarity=0.566 Sum_probs=219.6
Q ss_pred CCCceeEEEEEEeeC-CCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcccc
Q 020142 46 KVAFRQYAGYVDVDV-KNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNK 124 (330)
Q Consensus 46 ~~~~~~~sGyl~v~~-~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~ 124 (330)
+.++++|||||+|++ ..+++||||||||+++|+++||+|||||||||||+ .|+|.|+|||+++.++.+++.||+||++
T Consensus 42 ~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~ 120 (462)
T PTZ00472 42 DPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNN 120 (462)
T ss_pred CCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCccccc
Confidence 467889999999975 45689999999999999999999999999999999 6999999999999988889999999999
Q ss_pred ccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccC
Q 020142 125 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 204 (330)
Q Consensus 125 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~ 204 (330)
.+||||||||+||||||+... ++..+++++|+|+++||+.||++||+++++|+||+||||||+|+|.+|.+|+++|+.+
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~ 199 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKG 199 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhcccc
Confidence 999999999999999998653 4566789999999999999999999999999999999999999999999999998765
Q ss_pred CCceeeeeEEEecCCCCCccccchhHHHHhhh-------cCCCChHHHHHHHh---hCCccccccCCC--CCChhHHHHH
Q 020142 205 KGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWS-------HGMISDEIGLTIMS---DCDFDDYVSGTS--HNMTNSCIEA 272 (330)
Q Consensus 205 ~~~~inLkGi~igng~~d~~~~~~~~~~~~~~-------~gli~~~~~~~~~~---~C~~~~~~~~~~--~~~~~~C~~~ 272 (330)
.+.+||||||+|||||+||.+|..++.+|+|+ +|+|++++++++.+ .|... ...+.. ......|..+
T Consensus 200 ~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~-~~~c~~~~~~~~~~c~~a 278 (462)
T PTZ00472 200 DGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKK-IKECNSNPDDADSSCSVA 278 (462)
T ss_pred CCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHH-HHhccccCCCcchHHHHH
Confidence 55789999999999999999999999999996 48999999988865 35321 111111 1123345444
Q ss_pred HHHHHH----HhCCCCccccccCCCCCCchHHHHHHHhhhhhccCCCccch---hhhhccCccCC
Q 020142 273 ITEANK----IVGDYINNYDVILDVCYPTIVEQELRLRKMVYIMFFSHCFD---AILLLNLCNLQ 330 (330)
Q Consensus 273 ~~~~~~----~~~~~iN~YdI~~~~C~~~~~~~~~~~~~~~~~~~~~pC~d---~~~YLNrpdVq 330 (330)
...|.. ...+++|+||||.+ |. .++|.+ +++|||+|+||
T Consensus 279 ~~~c~~~~~~~~~~g~n~Ydi~~~-c~------------------~~~c~~~~~~~~yLN~~~Vq 324 (462)
T PTZ00472 279 RALCNEYIAVYSATGLNNYDIRKP-CI------------------GPLCYNMDNTIAFMNREDVQ 324 (462)
T ss_pred HHHHHHHHHHHHhcCCChhheecc-CC------------------CCCccCHHHHHHHhCCHHHH
Confidence 333211 11357999999985 83 246765 88899999886
No 6
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-50 Score=396.16 Aligned_cols=241 Identities=30% Similarity=0.514 Sum_probs=193.1
Q ss_pred ceeEEEEEEeeCCCC-----eeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCcc-ccCCcc
Q 020142 49 FRQYAGYVDVDVKNG-----RSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLR-RNSMSW 122 (330)
Q Consensus 49 ~~~~sGyl~v~~~~~-----~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~-~n~~sW 122 (330)
+..++|.++|+...| ..+|||+|+++++|.++|+||||||||||||+ .|+|.|+||++|+.+..... +||+||
T Consensus 65 ~~~~~G~lpv~~~~g~~d~ed~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW 143 (498)
T COG2939 65 YPATAGILPVRDYTGYPDAEDFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSW 143 (498)
T ss_pred cchhccccchhhccCCcccceeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCcccc
Confidence 445566665543222 24889999999999999999999999999999 59999999999997743333 699999
Q ss_pred ccccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCC--CeEEEcccccccchHHHHHHHHHh
Q 020142 123 NKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSR--ELFLTGESYAGHYIPQLADVLLDH 200 (330)
Q Consensus 123 ~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~--~~yi~GESYgG~yvp~la~~i~~~ 200 (330)
++++||||||||+||||||+ .......+.+.+.+|++.|++.||+.||++.+. |+||+||||||+|+|.+|.+|+++
T Consensus 144 ~~~adLvFiDqPvGTGfS~a-~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~ 222 (498)
T COG2939 144 LDFADLVFIDQPVGTGFSRA-LGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLED 222 (498)
T ss_pred ccCCceEEEecCcccCcccc-cccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHh
Confidence 99999999999999999998 333445677888999999999999999999988 999999999999999999999998
Q ss_pred cccCCCceeeeeEEEecCC-CCCccccchhHHHHhhhcC----CCChHHHHHHHhhCCccccc----cC-CCCCChhHHH
Q 020142 201 NAHSKGFKFNIKGVAIGNP-LLRLDQDVPAIYEFFWSHG----MISDEIGLTIMSDCDFDDYV----SG-TSHNMTNSCI 270 (330)
Q Consensus 201 n~~~~~~~inLkGi~igng-~~d~~~~~~~~~~~~~~~g----li~~~~~~~~~~~C~~~~~~----~~-~~~~~~~~C~ 270 (330)
+.. .+..+||++++|||| +|||..++..|..++..++ ..+.+.++++.+.|+.. +. .+ ........|.
T Consensus 223 ~~~-~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d-~~~~l~~g~~~~~~~~~c~ 300 (498)
T COG2939 223 NIA-LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGD-YCLALMKGCYDSGSLQPCE 300 (498)
T ss_pred ccc-cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhh-hHhhhccCCCCchhhhHHH
Confidence 632 233699999999999 9999999999999998654 55667778888888763 21 11 1223456888
Q ss_pred HHHHHHHHH-----hCCC---CccccccCCCC
Q 020142 271 EAITEANKI-----VGDY---INNYDVILDVC 294 (330)
Q Consensus 271 ~~~~~~~~~-----~~~~---iN~YdI~~~~C 294 (330)
.+...+... ...+ .|+||++.. |
T Consensus 301 ~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~-~ 331 (498)
T COG2939 301 NASAYLTGLMREYVGRAGGRLLNVYDIREE-C 331 (498)
T ss_pred HHHHHHHhcchhhhccccccccccccchhh-c
Confidence 776666421 1234 899999975 6
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-43 Score=329.78 Aligned_cols=234 Identities=28% Similarity=0.456 Sum_probs=196.9
Q ss_pred eEEEEEEeeCCCCeeEEEEEEEccCC-CCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccc
Q 020142 51 QYAGYVDVDVKNGRSLFYYFVEAEVE-PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLL 129 (330)
Q Consensus 51 ~~sGyl~v~~~~~~~lFy~~~es~~~-~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anll 129 (330)
.-.||++|+. +.|+|||++.+... ...+|+.||++||||+||.++|+|.|+||..++ +.+|+.+|.+.||||
T Consensus 3 ~~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adll 75 (414)
T KOG1283|consen 3 EDWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLL 75 (414)
T ss_pred ccccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEE
Confidence 4579999974 58999999987643 378999999999999999999999999999987 678999999999999
Q ss_pred eecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCcee
Q 020142 130 FVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKF 209 (330)
Q Consensus 130 fiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~i 209 (330)
|||.|||+||||.+..+.|+++++++|.|+...|+.||..||||+..|+||+-|||||+.++.+|..+....+++ +.+.
T Consensus 76 fvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G-~i~~ 154 (414)
T KOG1283|consen 76 FVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG-EIKL 154 (414)
T ss_pred EecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC-ceee
Confidence 999999999999999888999999999999999999999999999999999999999999999999999887753 4678
Q ss_pred eeeEEEecCCCCCccccchhHHHHhhhcCCCChHHHHHH---HhhCCccccccCCCCCChhHHHHHHHHHHHHhCCCCcc
Q 020142 210 NIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTI---MSDCDFDDYVSGTSHNMTNSCIEAITEANKIVGDYINN 286 (330)
Q Consensus 210 nLkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~---~~~C~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~iN~ 286 (330)
|+.||++|+.||+|..-..++.+|+++.+++|+...+.. .+.|... ...+.+..++......-..++.+ +.++|.
T Consensus 155 nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~-v~~g~~~~AT~~Wg~~e~li~~~-sn~Vdf 232 (414)
T KOG1283|consen 155 NFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGG-VDGGKWGGATGGWGGGENLISRE-SNGVDF 232 (414)
T ss_pred cceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhccc-ccCCccccccccccCcCcceeec-ccCcce
Confidence 999999999999999999999999999999999876554 3455532 22222333332223333334343 467999
Q ss_pred ccccCCCC
Q 020142 287 YDVILDVC 294 (330)
Q Consensus 287 YdI~~~~C 294 (330)
|||..+.-
T Consensus 233 YNil~~t~ 240 (414)
T KOG1283|consen 233 YNILTKTL 240 (414)
T ss_pred eeeeccCC
Confidence 99998654
No 8
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=8e-43 Score=334.68 Aligned_cols=188 Identities=26% Similarity=0.462 Sum_probs=155.9
Q ss_pred ccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccC
Q 020142 125 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 204 (330)
Q Consensus 125 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~ 204 (330)
+|||||||||+||||||+.+...+ .+++++|+|++.||+.||++||+|+++||||+||||||||||.+|++|+++|...
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998765444 4566777999999999999999999999999999999999999999999988654
Q ss_pred CCceeeeeEEEecCCCCCccccchhHHHHhhhcCCCChHHHHHHHhhCCccccccCCCCCChhHHHHHHHHHHHHhCCCC
Q 020142 205 KGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKIVGDYI 284 (330)
Q Consensus 205 ~~~~inLkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~i 284 (330)
.+++||||||+|||||++|..+..++.+|++.||+|++++++.+++.|...... ...+...|.+++..+... .+.+
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~---~~~~~~~c~~~~~~~~~~-~~~~ 155 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYN---VDPSNTQCLKLTEEYHKC-TAKI 155 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccC---CCCCcHHHHHHHHHHHHH-HhcC
Confidence 456899999999999999999999999999999999999999999999753211 123567899988766433 4579
Q ss_pred ccccccCCCCCCchHHHHHHHhhhhhccCCCccch-----hhhhccCccCC
Q 020142 285 NNYDVILDVCYPTIVEQELRLRKMVYIMFFSHCFD-----AILLLNLCNLQ 330 (330)
Q Consensus 285 N~YdI~~~~C~~~~~~~~~~~~~~~~~~~~~pC~d-----~~~YLNrpdVq 330 (330)
|+||++.+.|.... ...+.|.+ +++|||+|+||
T Consensus 156 ~~~~~~~~~~~~~~-------------~~~~~c~~~~~~~~~~ylN~~~V~ 193 (319)
T PLN02213 156 NIHHILTPDCDVTN-------------VTSPDCYYYPYHLIECWANDESVR 193 (319)
T ss_pred CHhhcccCcccCcc-------------CCCCCcccchhHHHHHHhCCHHHH
Confidence 99999976674211 01246752 78899999986
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.43 E-value=9.6e-07 Score=78.98 Aligned_cols=107 Identities=16% Similarity=0.161 Sum_probs=72.1
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHH
Q 020142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTAR 157 (330)
Q Consensus 78 ~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~ 157 (330)
++.|+||+++|.+|.+..+ ..+.+ -+.+..+++.+|.| |.|.|....... .+.++.++
T Consensus 11 ~~~~~iv~lhG~~~~~~~~-~~~~~------------------~l~~~~~vi~~D~~-G~G~S~~~~~~~--~~~~~~~~ 68 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYW-APQLD------------------VLTQRFHVVTYDHR-GTGRSPGELPPG--YSIAHMAD 68 (257)
T ss_pred CCCCEEEEEcCCCcchhHH-HHHHH------------------HHHhccEEEEEcCC-CCCCCCCCCccc--CCHHHHHH
Confidence 4679999999998877653 22111 12234799999988 999996433222 34556666
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCc
Q 020142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~ 223 (330)
++.+++.. ....+++|+|+|+||..+..+|.+..+ .++++++.+++..+
T Consensus 69 ~~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~----------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 69 DVLQLLDA-------LNIERFHFVGHALGGLIGLQLALRYPE----------RLLSLVLINAWSRP 117 (257)
T ss_pred HHHHHHHH-------hCCCcEEEEEechhHHHHHHHHHHChH----------HhHHheeecCCCCC
Confidence 76666653 234579999999999988888764322 36788887776654
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.38 E-value=1.6e-06 Score=78.60 Aligned_cols=130 Identities=22% Similarity=0.272 Sum_probs=78.0
Q ss_pred EEEEEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcccccccccee
Q 020142 52 YAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFV 131 (330)
Q Consensus 52 ~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfi 131 (330)
..++++++. ..+.|.-+. .+...|.||+++||||+++.....+.+. +.. +-.+++.+
T Consensus 3 ~~~~~~~~~---~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~~-----------l~~------~g~~vi~~ 59 (288)
T TIGR01250 3 IEGIITVDG---GYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLREL-----------LKE------EGREVIMY 59 (288)
T ss_pred ccceecCCC---CeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHHH-----------HHh------cCCEEEEE
Confidence 345665542 334443222 2234688899999999986532222110 110 13779999
Q ss_pred cCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeee
Q 020142 132 ESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNI 211 (330)
Q Consensus 132 DqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inL 211 (330)
|.| |.|.|..........+.+..++++..++.. +..++++|+|+|+||..+..+|..- ...+
T Consensus 60 d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~----------p~~v 121 (288)
T TIGR01250 60 DQL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKY----------GQHL 121 (288)
T ss_pred cCC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhC----------cccc
Confidence 988 999986432221013445566666555442 2345699999999999888877542 1247
Q ss_pred eEEEecCCCCC
Q 020142 212 KGVAIGNPLLR 222 (330)
Q Consensus 212 kGi~igng~~d 222 (330)
+++++.++...
T Consensus 122 ~~lvl~~~~~~ 132 (288)
T TIGR01250 122 KGLIISSMLDS 132 (288)
T ss_pred ceeeEeccccc
Confidence 78888877543
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.37 E-value=5.2e-06 Score=78.23 Aligned_cols=140 Identities=20% Similarity=0.244 Sum_probs=86.5
Q ss_pred CCCccccCCCCCCCCceeEEEEEEeeCCCCe--eEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCC
Q 020142 34 AEDLVVSLPGQPKVAFRQYAGYVDVDVKNGR--SLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGD 111 (330)
Q Consensus 34 ~~~~v~~Lpg~~~~~~~~~sGyl~v~~~~~~--~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~ 111 (330)
++.++.+||..| ..-.|+.+++.+++ +++|. +. .++ +.|.|+.++|.|+.+..+ ..+.+
T Consensus 7 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~y~--~~-G~~-~~~~lvliHG~~~~~~~w-~~~~~--------- 67 (302)
T PRK00870 7 PDSRFENLPDYP-----FAPHYVDVDDGDGGPLRMHYV--DE-GPA-DGPPVLLLHGEPSWSYLY-RKMIP--------- 67 (302)
T ss_pred CcccccCCcCCC-----CCceeEeecCCCCceEEEEEE--ec-CCC-CCCEEEEECCCCCchhhH-HHHHH---------
Confidence 344677888664 34567888764444 46655 22 223 468899999998777664 22211
Q ss_pred CCCccccCCccc-cccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccch
Q 020142 112 GRGLRRNSMSWN-KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYI 190 (330)
Q Consensus 112 ~~~~~~n~~sW~-~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 190 (330)
... +-.+++.+|.| |.|.|-.... ....+.+..++++.++|++ +...+++|+|||+||..+
T Consensus 68 ---------~L~~~gy~vi~~Dl~-G~G~S~~~~~-~~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia 129 (302)
T PRK00870 68 ---------ILAAAGHRVIAPDLI-GFGRSDKPTR-REDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIG 129 (302)
T ss_pred ---------HHHhCCCEEEEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHH
Confidence 011 23789999988 9998843211 1122445556666555542 234579999999999988
Q ss_pred HHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 191 PQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 191 p~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
-.+|.+-.+ .++++++.++.
T Consensus 130 ~~~a~~~p~----------~v~~lvl~~~~ 149 (302)
T PRK00870 130 LRLAAEHPD----------RFARLVVANTG 149 (302)
T ss_pred HHHHHhChh----------heeEEEEeCCC
Confidence 777754211 37788877754
No 12
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.19 E-value=8.5e-06 Score=76.30 Aligned_cols=105 Identities=17% Similarity=0.103 Sum_probs=72.3
Q ss_pred CCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCC----CCCCchhh
Q 020142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSD----YNCGDAST 155 (330)
Q Consensus 80 ~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~----~~~~~~~~ 155 (330)
.|.||+++|.++.+.++ ..+.+ .+.+..+++.+|.| |.|.|-...... ...+.++.
T Consensus 29 ~~~vlllHG~~~~~~~w-~~~~~------------------~L~~~~~vi~~Dlp-G~G~S~~~~~~~~~~~~~~~~~~~ 88 (294)
T PLN02824 29 GPALVLVHGFGGNADHW-RKNTP------------------VLAKSHRVYAIDLL-GYGYSDKPNPRSAPPNSFYTFETW 88 (294)
T ss_pred CCeEEEECCCCCChhHH-HHHHH------------------HHHhCCeEEEEcCC-CCCCCCCCccccccccccCCHHHH
Confidence 37899999999988874 33221 13345689999988 999996433211 12355666
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 156 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
|+|+.++|... ..++++|+|+|.||..+-.+|.+-.+ .++++++.|+..
T Consensus 89 a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~----------~v~~lili~~~~ 137 (294)
T PLN02824 89 GEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE----------LVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh----------heeEEEEECCCc
Confidence 77777777642 24679999999999988777754322 378888888754
No 13
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.19 E-value=8.8e-06 Score=77.17 Aligned_cols=125 Identities=18% Similarity=0.306 Sum_probs=74.2
Q ss_pred EEEEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcc-cccccccee
Q 020142 53 AGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSW-NKASNLLFV 131 (330)
Q Consensus 53 sGyl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW-~~~anllfi 131 (330)
.+|+.+.+ +.+++|.-. ..+. .|.||.++|+||.++.. ... ..| .+..+++.+
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~-~~~-------------------~~~~~~~~~vi~~ 59 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDP-GCR-------------------RFFDPETYRIVLF 59 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCCH-HHH-------------------hccCccCCEEEEE
Confidence 46777753 567777532 1222 45578899999876542 110 011 134789999
Q ss_pred cCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeee
Q 020142 132 ESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNI 211 (330)
Q Consensus 132 DqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inL 211 (330)
|.| |.|.|.... .....+.++.++|+..+++ .. ...+++++|+|+||..+-.+|.+-.+ .+
T Consensus 60 D~~-G~G~S~~~~-~~~~~~~~~~~~dl~~l~~----~l---~~~~~~lvG~S~GG~ia~~~a~~~p~----------~v 120 (306)
T TIGR01249 60 DQR-GCGKSTPHA-CLEENTTWDLVADIEKLRE----KL---GIKNWLVFGGSWGSTLALAYAQTHPE----------VV 120 (306)
T ss_pred CCC-CCCCCCCCC-CcccCCHHHHHHHHHHHHH----Hc---CCCCEEEEEECHHHHHHHHHHHHChH----------hh
Confidence 988 999996432 1112233444555544443 32 33579999999999877777654322 35
Q ss_pred eEEEecCCCCC
Q 020142 212 KGVAIGNPLLR 222 (330)
Q Consensus 212 kGi~igng~~d 222 (330)
+++++.+..+.
T Consensus 121 ~~lvl~~~~~~ 131 (306)
T TIGR01249 121 TGLVLRGIFLL 131 (306)
T ss_pred hhheeeccccC
Confidence 67777665543
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=98.18 E-value=1.1e-05 Score=74.54 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=80.5
Q ss_pred CCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcccc-ccccceecCCCCcCcc
Q 020142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNK-ASNLLFVESPAGVGWS 140 (330)
Q Consensus 62 ~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~-~anllfiDqPvGtGfS 140 (330)
.|.+|+|..++.. +..+|+||.++|..++|..+ -.+.+ .+.+ -..++-+|.| |.|.|
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~~-~~~~~------------------~l~~~g~~via~D~~-G~G~S 66 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGRY-EELAE------------------NISSLGILVFSHDHI-GHGRS 66 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccchH-HHHHH------------------HHHhCCCEEEEccCC-CCCCC
Confidence 4568998877664 34569999999997666553 22211 1333 3678899988 99998
Q ss_pred cccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 141 YSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 141 y~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
-..... ..+-....+|+.+++....+.+ ...+++|+|+|.||..+..+|.+ .. -.++|+++.+|.
T Consensus 67 ~~~~~~--~~~~~~~~~d~~~~l~~~~~~~---~~~~~~lvG~S~GG~ia~~~a~~---~p-------~~i~~lil~~p~ 131 (276)
T PHA02857 67 NGEKMM--IDDFGVYVRDVVQHVVTIKSTY---PGVPVFLLGHSMGATISILAAYK---NP-------NLFTAMILMSPL 131 (276)
T ss_pred CCccCC--cCCHHHHHHHHHHHHHHHHhhC---CCCCEEEEEcCchHHHHHHHHHh---Cc-------cccceEEEeccc
Confidence 542111 1122344566666665443333 35689999999999866655532 11 247999999997
Q ss_pred CCcc
Q 020142 221 LRLD 224 (330)
Q Consensus 221 ~d~~ 224 (330)
+++.
T Consensus 132 ~~~~ 135 (276)
T PHA02857 132 VNAE 135 (276)
T ss_pred cccc
Confidence 7643
No 15
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.15 E-value=1.5e-05 Score=72.84 Aligned_cols=108 Identities=18% Similarity=0.089 Sum_probs=71.1
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhH
Q 020142 77 PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTA 156 (330)
Q Consensus 77 ~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a 156 (330)
+.+.|.||+++|.+|.+..+ ..+.+ ...+..+++.+|.| |.|.|...... ..+.+..+
T Consensus 25 ~~~~~~vv~~hG~~~~~~~~-~~~~~------------------~l~~~~~vi~~D~~-G~G~S~~~~~~--~~~~~~~~ 82 (278)
T TIGR03056 25 PTAGPLLLLLHGTGASTHSW-RDLMP------------------PLARSFRVVAPDLP-GHGFTRAPFRF--RFTLPSMA 82 (278)
T ss_pred CCCCCeEEEEcCCCCCHHHH-HHHHH------------------HHhhCcEEEeecCC-CCCCCCCcccc--CCCHHHHH
Confidence 34568999999998876653 22211 01123689999988 99988643321 23556667
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCc
Q 020142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 157 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~ 223 (330)
+++.++++. +..++++|+|+|+||..+..+|... .-.++++++.++..++
T Consensus 83 ~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 83 EDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDG----------PVTPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhC----------CcccceEEEEcCcccc
Confidence 777776653 2235789999999998777666432 1246788888876654
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.13 E-value=8.6e-06 Score=73.90 Aligned_cols=104 Identities=15% Similarity=0.186 Sum_probs=72.9
Q ss_pred CCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchh
Q 020142 75 VEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDAS 154 (330)
Q Consensus 75 ~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~ 154 (330)
+.+.++|.||+++|.+|.+..+ ..+.+ .+.+..+++.+|.| |-|.|.... . .+.++
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~~-~~~~~------------------~l~~~~~vi~~D~~-G~G~s~~~~--~--~~~~~ 66 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDNL-GVLAR------------------DLVNDHDIIQVDMR-NHGLSPRDP--V--MNYPA 66 (255)
T ss_pred CCCCCCCCEEEECCCCCchhHH-HHHHH------------------HHhhCCeEEEECCC-CCCCCCCCC--C--CCHHH
Confidence 4566789999999999887763 33321 12245799999988 999886422 2 35566
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCC
Q 020142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (330)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 219 (330)
.++|+..+|.. +...+++|+|+|.||..+..+|.+..+ .++++++.++
T Consensus 67 ~~~d~~~~l~~-------l~~~~~~lvGhS~Gg~va~~~a~~~~~----------~v~~lvli~~ 114 (255)
T PRK10673 67 MAQDLLDTLDA-------LQIEKATFIGHSMGGKAVMALTALAPD----------RIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHH-------cCCCceEEEEECHHHHHHHHHHHhCHh----------hcceEEEEec
Confidence 77888888764 233569999999999988888765322 3677777653
No 17
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.09 E-value=1.7e-05 Score=75.73 Aligned_cols=139 Identities=17% Similarity=0.131 Sum_probs=84.5
Q ss_pred eEEEEEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcccc-ccccc
Q 020142 51 QYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNK-ASNLL 129 (330)
Q Consensus 51 ~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~-~anll 129 (330)
...+++... .|.+++|+.+........+|+|++++|..+.++-..-.+ ...+.+ -.+|+
T Consensus 32 ~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~------------------~~~L~~~Gy~V~ 91 (330)
T PLN02298 32 GSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQST------------------AIFLAQMGFACF 91 (330)
T ss_pred cccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHH------------------HHHHHhCCCEEE
Confidence 345666553 467888865543222245789999999853332110000 011333 37899
Q ss_pred eecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCcee
Q 020142 130 FVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKF 209 (330)
Q Consensus 130 fiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~i 209 (330)
.+|+| |.|.|-.. ..+..+.+..++|+..+++... ...++...+++|+|+|.||..+-.++.+ .. -
T Consensus 92 ~~D~r-GhG~S~~~--~~~~~~~~~~~~D~~~~i~~l~-~~~~~~~~~i~l~GhSmGG~ia~~~a~~---~p-------~ 157 (330)
T PLN02298 92 ALDLE-GHGRSEGL--RAYVPNVDLVVEDCLSFFNSVK-QREEFQGLPRFLYGESMGGAICLLIHLA---NP-------E 157 (330)
T ss_pred EecCC-CCCCCCCc--cccCCCHHHHHHHHHHHHHHHH-hcccCCCCCEEEEEecchhHHHHHHHhc---Cc-------c
Confidence 99998 99988432 1222345566788888876433 3223445579999999999876655432 11 1
Q ss_pred eeeEEEecCCCCCc
Q 020142 210 NIKGVAIGNPLLRL 223 (330)
Q Consensus 210 nLkGi~igng~~d~ 223 (330)
.++|+++.+++.+.
T Consensus 158 ~v~~lvl~~~~~~~ 171 (330)
T PLN02298 158 GFDGAVLVAPMCKI 171 (330)
T ss_pred cceeEEEecccccC
Confidence 48899998887653
No 18
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.09 E-value=7.3e-06 Score=80.26 Aligned_cols=133 Identities=20% Similarity=0.261 Sum_probs=81.3
Q ss_pred eEEEEEEEc--cCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccc
Q 020142 65 SLFYYFVEA--EVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYS 142 (330)
Q Consensus 65 ~lFy~~~es--~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~ 142 (330)
.-.||++++ +.+|++||+||+++|| |.+.++=|..+. .-.+=+...+...+|.+|-..-. |-
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~-----~L~~i~~~l~~~SILvLDYsLt~--~~- 168 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIE-----FLLNIYKLLPEVSILVLDYSLTS--SD- 168 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHH-----HHHHHHHHcCCCeEEEEeccccc--cc-
Confidence 456899985 3468889999999999 566666666542 11111222223388899844222 00
Q ss_pred cCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCC
Q 020142 143 NTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 143 ~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 222 (330)
.....+.+-. .++.+..+...+. -..+++.|+|+|.||+-+-.+.+++.+.+.. +--|..++.+||++
T Consensus 169 ~~~~~yPtQL----~qlv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~-----~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 169 EHGHKYPTQL----RQLVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPNKL-----PYPKSAILISPWVN 236 (374)
T ss_pred cCCCcCchHH----HHHHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcCCC-----CCCceeEEECCCcC
Confidence 0111222222 2222333322222 2345799999999999999999998765431 33579999999999
Q ss_pred ccc
Q 020142 223 LDQ 225 (330)
Q Consensus 223 ~~~ 225 (330)
+..
T Consensus 237 l~~ 239 (374)
T PF10340_consen 237 LVP 239 (374)
T ss_pred CcC
Confidence 973
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.06 E-value=1.8e-05 Score=76.57 Aligned_cols=129 Identities=16% Similarity=0.156 Sum_probs=80.4
Q ss_pred CCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcccc-ccccceecCCCCcCc
Q 020142 61 KNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNK-ASNLLFVESPAGVGW 139 (330)
Q Consensus 61 ~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~-~anllfiDqPvGtGf 139 (330)
..|..+|+..+...+ .+.+|+||+++|..+.++...-.+. ..+.+ -.+++-+|.| |.|.
T Consensus 69 ~~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~------------------~~l~~~g~~v~~~D~~-G~G~ 128 (349)
T PLN02385 69 SRGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIA------------------RKIASSGYGVFAMDYP-GFGL 128 (349)
T ss_pred CCCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHH------------------HHHHhCCCEEEEecCC-CCCC
Confidence 346678876554322 2457999999998665443111110 11222 3688999998 9998
Q ss_pred ccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCC
Q 020142 140 SYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (330)
Q Consensus 140 Sy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 219 (330)
|-.. ..+..+-+..++|+.++++. +...+++...+++|+|||+||..+-.+|.+ +. -.++|+++.++
T Consensus 129 S~~~--~~~~~~~~~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~---~p-------~~v~glVLi~p 195 (349)
T PLN02385 129 SEGL--HGYIPSFDDLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLK---QP-------NAWDGAILVAP 195 (349)
T ss_pred CCCC--CCCcCCHHHHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHh---Cc-------chhhheeEecc
Confidence 8532 12223445667777777754 344445556689999999999876655533 11 13788888887
Q ss_pred CCC
Q 020142 220 LLR 222 (330)
Q Consensus 220 ~~d 222 (330)
...
T Consensus 196 ~~~ 198 (349)
T PLN02385 196 MCK 198 (349)
T ss_pred ccc
Confidence 643
No 20
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.06 E-value=1.1e-05 Score=69.77 Aligned_cols=104 Identities=21% Similarity=0.284 Sum_probs=69.1
Q ss_pred EEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHH
Q 020142 83 TLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVF 162 (330)
Q Consensus 83 vlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~f 162 (330)
||.++|.++.+..+ ..+.+ .+.+-.+++.+|.| |.|.|-.... ....+.++.++++.++
T Consensus 1 vv~~hG~~~~~~~~-~~~~~------------------~l~~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~l~~~ 59 (228)
T PF12697_consen 1 VVFLHGFGGSSESW-DPLAE------------------ALARGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAEDLAEL 59 (228)
T ss_dssp EEEE-STTTTGGGG-HHHHH------------------HHHTTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHHHHHH
T ss_pred eEEECCCCCCHHHH-HHHHH------------------HHhCCCEEEEEecC-Cccccccccc-cCCcchhhhhhhhhhc
Confidence 68999999888663 33221 11246689999988 9999865432 1123445556666665
Q ss_pred HHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 163 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 163 L~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
++ ... .++++|+|+|+||..+-.+|.+..+ .++|+++.++.....
T Consensus 60 l~----~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~----------~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 60 LD----ALG---IKKVILVGHSMGGMIALRLAARYPD----------RVKGLVLLSPPPPLP 104 (228)
T ss_dssp HH----HTT---TSSEEEEEETHHHHHHHHHHHHSGG----------GEEEEEEESESSSHH
T ss_pred cc----ccc---ccccccccccccccccccccccccc----------ccccceeeccccccc
Confidence 54 332 2689999999999988877755222 488999999887643
No 21
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.94 E-value=5.7e-05 Score=70.11 Aligned_cols=117 Identities=16% Similarity=0.130 Sum_probs=73.7
Q ss_pred CeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccc
Q 020142 63 GRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYS 142 (330)
Q Consensus 63 ~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~ 142 (330)
+..+.|+..+. . ...|.|++++|-++.+..+ ..+.+ ...+..+++.+|.| |.|.|-.
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w-~~~~~------------------~L~~~~~vi~~Dl~-G~G~S~~ 67 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLELV-FPFIE------------------ALDPDLEVIAFDVP-GVGGSST 67 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHHH-HHHHH------------------HhccCceEEEECCC-CCCCCCC
Confidence 45677775432 2 2346789999876666653 22211 01245799999988 9999943
Q ss_pred cCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCC
Q 020142 143 NTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 143 ~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 222 (330)
.. . ..+.+..++++.+++.. +.-.+++|+|+|+||..+-.+|.+-.+ .++++++.|+...
T Consensus 68 ~~-~--~~~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~p~----------~v~~lvl~~~~~~ 127 (276)
T TIGR02240 68 PR-H--PYRFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDYPE----------RCKKLILAATAAG 127 (276)
T ss_pred CC-C--cCcHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHCHH----------HhhheEEeccCCc
Confidence 21 1 22444555666565553 223579999999999987777754221 3789999887654
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.93 E-value=6e-05 Score=70.58 Aligned_cols=104 Identities=18% Similarity=0.206 Sum_probs=70.8
Q ss_pred CCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHH
Q 020142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDM 159 (330)
Q Consensus 80 ~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 159 (330)
.|.||+++|.|+.+..+ -.+.+ .+.+...++-+|.| |.|.|-... .. .+.+..|+|+
T Consensus 27 g~~vvllHG~~~~~~~w-~~~~~------------------~L~~~~~via~D~~-G~G~S~~~~-~~--~~~~~~a~dl 83 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLW-RNIIP------------------HLAGLGRCLAPDLI-GMGASDKPD-ID--YTFADHARYL 83 (295)
T ss_pred CCEEEEECCCCCCHHHH-HHHHH------------------HHhhCCEEEEEcCC-CCCCCCCCC-CC--CCHHHHHHHH
Confidence 47899999999888774 22211 12334589999988 999985432 22 3455666777
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCc
Q 020142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~ 223 (330)
..+++. +...+++|+|+|.||..+-.+|.+-.+ .++++++.|+...+
T Consensus 84 ~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p~----------~v~~lil~~~~~~~ 130 (295)
T PRK03592 84 DAWFDA-------LGLDDVVLVGHDWGSALGFDWAARHPD----------RVRGIAFMEAIVRP 130 (295)
T ss_pred HHHHHH-------hCCCCeEEEEECHHHHHHHHHHHhChh----------heeEEEEECCCCCC
Confidence 666654 234689999999999887777654322 37899999885544
No 23
>PRK06489 hypothetical protein; Provisional
Probab=97.92 E-value=9.2e-05 Score=71.98 Aligned_cols=142 Identities=12% Similarity=0.057 Sum_probs=73.5
Q ss_pred CceeEEEEEEeeCCCCeeEEEEEEEcc---CCCCCCCEEEEEcCCCChhhhhh-hhhhccCCceecCCCCCccccCCccc
Q 020142 48 AFRQYAGYVDVDVKNGRSLFYYFVEAE---VEPHEKPLTLWLNGGPGCSSVGG-GAFTELGPFYPRGDGRGLRRNSMSWN 123 (330)
Q Consensus 48 ~~~~~sGyl~v~~~~~~~lFy~~~es~---~~~~~~PlvlWlnGGPG~SS~~~-g~~~E~GP~~~~~~~~~~~~n~~sW~ 123 (330)
++...+|. .+ .+.+++|.-+... .+.++.|.|+.++|++|.+..+. ..+.+ ..+. ....--.
T Consensus 38 ~~~~~~~~-~~---~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~---~l~~-------~~~~l~~ 103 (360)
T PRK06489 38 DFTFHSGE-TL---PELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAG---ELFG-------PGQPLDA 103 (360)
T ss_pred ceeccCCC-Cc---CCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHH---HhcC-------CCCcccc
Confidence 34445664 22 2456766633210 01233688999999988665421 00000 0000 0000012
Q ss_pred cccccceecCCCCcCcccccCCCC---C-CCCchhhHHHHHHHHHHHHHHCCCCCCCCe-EEEcccccccchHHHHHHHH
Q 020142 124 KASNLLFVESPAGVGWSYSNTTSD---Y-NCGDASTARDMHVFMMNWYEKFPEFKSREL-FLTGESYAGHYIPQLADVLL 198 (330)
Q Consensus 124 ~~anllfiDqPvGtGfSy~~~~~~---~-~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~-yi~GESYgG~yvp~la~~i~ 198 (330)
+..+++.+|.| |.|.|-...... . ..+.++.++++..++.+ ++.-.++ +|+|+|+||..+-.+|.+-.
T Consensus 104 ~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~------~lgi~~~~~lvG~SmGG~vAl~~A~~~P 176 (360)
T PRK06489 104 SKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE------GLGVKHLRLILGTSMGGMHAWMWGEKYP 176 (360)
T ss_pred cCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH------hcCCCceeEEEEECHHHHHHHHHHHhCc
Confidence 45789999998 999985322110 0 12334445555444432 2222355 48999999987777765432
Q ss_pred HhcccCCCceeeeeEEEecCCC
Q 020142 199 DHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 199 ~~n~~~~~~~inLkGi~igng~ 220 (330)
+ .++++++.++.
T Consensus 177 ~----------~V~~LVLi~s~ 188 (360)
T PRK06489 177 D----------FMDALMPMASQ 188 (360)
T ss_pred h----------hhheeeeeccC
Confidence 2 26677766653
No 24
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.79 E-value=5.3e-05 Score=68.27 Aligned_cols=100 Identities=19% Similarity=0.191 Sum_probs=66.4
Q ss_pred CCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHH
Q 020142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDM 159 (330)
Q Consensus 80 ~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 159 (330)
.|.||+++|.+|.+..+ -.+. + . . +..+++.+|.| |.|.|.... ..+.++.++++
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~~---------------~-~--l-~~~~vi~~D~~-G~G~S~~~~----~~~~~~~~~~l 56 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPVG---------------E-A--L-PDYPRLYIDLP-GHGGSAAIS----VDGFADVSRLL 56 (242)
T ss_pred CCEEEEECCCCCChHHH-HHHH---------------H-H--c-CCCCEEEecCC-CCCCCCCcc----ccCHHHHHHHH
Confidence 58899999999988764 2221 1 1 1 24789999987 999985322 12445556666
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
.++|.. +.-.+++++|+|+||..+-.+|.+.... .++++++.++.
T Consensus 57 ~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~~---------~v~~lvl~~~~ 101 (242)
T PRK11126 57 SQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLAG---------GLCGLIVEGGN 101 (242)
T ss_pred HHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCcc---------cccEEEEeCCC
Confidence 666653 3446899999999998877777652110 26788887654
No 25
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.78 E-value=0.00014 Score=72.22 Aligned_cols=130 Identities=17% Similarity=0.180 Sum_probs=82.8
Q ss_pred CCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccc-cccccceecCCCCcCc
Q 020142 61 KNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWN-KASNLLFVESPAGVGW 139 (330)
Q Consensus 61 ~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~-~~anllfiDqPvGtGf 139 (330)
..+..+|++.+.... .+.+|+|++++|.++.+... -.+.+ .+. +-.+++-+|.| |.|.
T Consensus 118 ~~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~-~~~a~------------------~L~~~Gy~V~~~D~r-GhG~ 176 (395)
T PLN02652 118 ARRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRY-LHFAK------------------QLTSCGFGVYAMDWI-GHGG 176 (395)
T ss_pred CCCCEEEEEEecCCC-CCCceEEEEECCchHHHHHH-HHHHH------------------HHHHCCCEEEEeCCC-CCCC
Confidence 344577777665532 34578999999997765542 22111 121 23578899988 9998
Q ss_pred ccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCC
Q 020142 140 SYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (330)
Q Consensus 140 Sy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 219 (330)
|-.. ..+..+.+..++|+..+++..-..+| ..+++|+|||+||..+..++. +.. ..-.++|+++.+|
T Consensus 177 S~~~--~~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~----~~~~v~glVL~sP 243 (395)
T PLN02652 177 SDGL--HGYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS----IEDKLEGIVLTSP 243 (395)
T ss_pred CCCC--CCCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC----cccccceEEEECc
Confidence 8542 22333455667788778776655555 347999999999987655442 111 0124889999999
Q ss_pred CCCcc
Q 020142 220 LLRLD 224 (330)
Q Consensus 220 ~~d~~ 224 (330)
+++..
T Consensus 244 ~l~~~ 248 (395)
T PLN02652 244 ALRVK 248 (395)
T ss_pred ccccc
Confidence 87543
No 26
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.75 E-value=6.2e-05 Score=78.82 Aligned_cols=143 Identities=15% Similarity=0.163 Sum_probs=87.0
Q ss_pred EEEeeCCCCeeEEEEEEEccC-CCCC-CCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCc-ccccccccee
Q 020142 55 YVDVDVKNGRSLFYYFVEAEV-EPHE-KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMS-WNKASNLLFV 131 (330)
Q Consensus 55 yl~v~~~~~~~lFy~~~es~~-~~~~-~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~s-W~~~anllfi 131 (330)
++.+....|..+..|++...+ ++.. -|+|++++||| +++ .|. . ...+... +.+-..|+++
T Consensus 367 ~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~-------~-------~~~~~q~~~~~G~~V~~~ 429 (620)
T COG1506 367 PVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY-------S-------FNPEIQVLASAGYAVLAP 429 (620)
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc-------c-------cchhhHHHhcCCeEEEEe
Confidence 444554556789999886643 3333 49999999999 444 231 1 1111112 2345688888
Q ss_pred cCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeee
Q 020142 132 ESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNI 211 (330)
Q Consensus 132 DqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inL 211 (330)
+-.--+||+..-.......--....+|+.+++. |+.+.|.-...++.|+|.||||...-.++ .+. . .+
T Consensus 430 n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~----~~~------~-~f 497 (620)
T COG1506 430 NYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAA----TKT------P-RF 497 (620)
T ss_pred CCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHH----hcC------c-hh
Confidence 844345665432111110111245678889999 99999999888899999999997544333 221 1 36
Q ss_pred eEEEecCCCCCcccc
Q 020142 212 KGVAIGNPLLRLDQD 226 (330)
Q Consensus 212 kGi~igng~~d~~~~ 226 (330)
+..+...+.++....
T Consensus 498 ~a~~~~~~~~~~~~~ 512 (620)
T COG1506 498 KAAVAVAGGVDWLLY 512 (620)
T ss_pred heEEeccCcchhhhh
Confidence 677777776665443
No 27
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.74 E-value=0.00015 Score=71.93 Aligned_cols=108 Identities=15% Similarity=0.179 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCc-hhhH
Q 020142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGD-ASTA 156 (330)
Q Consensus 78 ~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~-~~~a 156 (330)
..+|.||.++|.++.+..+.-.+ ..+.+..+++-+|.| |.|.|-.. .+..++ ++..
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~-------------------~~L~~~~~vi~~D~r-G~G~S~~~---~~~~~~~~~~~ 159 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNF-------------------DALASRFRVIAIDQL-GWGGSSRP---DFTCKSTEETE 159 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHH-------------------HHHHhCCEEEEECCC-CCCCCCCC---CcccccHHHHH
Confidence 46799999999977665531111 112344789999988 99988422 121222 3333
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 157 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
+.+.+.+.+|.+.. ...+++|+|||+||..+-.+|.+-. -.++++++.+++.
T Consensus 160 ~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p----------~~v~~lvl~~p~~ 211 (402)
T PLN02894 160 AWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHP----------EHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCc----------hhhcEEEEECCcc
Confidence 44556666776543 2347999999999987666664321 2477888887753
No 28
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.74 E-value=0.00012 Score=64.27 Aligned_cols=105 Identities=21% Similarity=0.226 Sum_probs=64.8
Q ss_pred CCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHH
Q 020142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDM 159 (330)
Q Consensus 80 ~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 159 (330)
+|+||.++|.+|.+..+ -.+.+ ...+-.+++-+|.| |.|.|..... ....+.++.++++
T Consensus 1 ~~~vv~~hG~~~~~~~~-~~~~~------------------~L~~~~~v~~~d~~-g~G~s~~~~~-~~~~~~~~~~~~~ 59 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADW-QALIE------------------LLGPHFRCLAIDLP-GHGSSQSPDE-IERYDFEEAAQDI 59 (251)
T ss_pred CCEEEEEcCCCCchhhH-HHHHH------------------HhcccCeEEEEcCC-CCCCCCCCCc-cChhhHHHHHHHH
Confidence 48899999998877663 22111 11134688999987 9998843211 1122334444442
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
+..+.+.. ..++++|+|+|+||..+..+|.+.. -.++++++.++..
T Consensus 60 ---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~----------~~v~~lil~~~~~ 105 (251)
T TIGR03695 60 ---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYP----------ERVQGLILESGSP 105 (251)
T ss_pred ---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCc----------hheeeeEEecCCC
Confidence 23333332 3568999999999998888876532 1477888877643
No 29
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.74 E-value=0.00015 Score=64.00 Aligned_cols=89 Identities=15% Similarity=0.094 Sum_probs=58.1
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHH
Q 020142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTAR 157 (330)
Q Consensus 78 ~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~ 157 (330)
..+|++|.++|-++.+..+ ..+.+ ...+..+++.+|.| |.|.|-... ...+.++.++
T Consensus 11 ~~~~~li~~hg~~~~~~~~-~~~~~------------------~l~~~~~v~~~d~~-G~G~s~~~~---~~~~~~~~~~ 67 (251)
T TIGR02427 11 DGAPVLVFINSLGTDLRMW-DPVLP------------------ALTPDFRVLRYDKR-GHGLSDAPE---GPYSIEDLAD 67 (251)
T ss_pred CCCCeEEEEcCcccchhhH-HHHHH------------------HhhcccEEEEecCC-CCCCCCCCC---CCCCHHHHHH
Confidence 3679999999865544442 22211 01234689999988 999884321 1235556677
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHH
Q 020142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 196 (330)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~ 196 (330)
++.++++.+ ...+++|+|+|+||..+-.+|.+
T Consensus 68 ~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 68 DVLALLDHL-------GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHH
Confidence 776666532 24579999999999988777764
No 30
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.73 E-value=0.00022 Score=67.05 Aligned_cols=122 Identities=17% Similarity=0.237 Sum_probs=71.5
Q ss_pred EEEEEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcccccccccee
Q 020142 52 YAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFV 131 (330)
Q Consensus 52 ~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfi 131 (330)
.+.+++++ +..++|- + .. ..|.||.++|.|..+..+ -.+. ..+.+..+++-+
T Consensus 15 ~~~~~~~~---~~~i~y~--~-~G---~~~~iv~lHG~~~~~~~~-~~~~------------------~~l~~~~~vi~~ 66 (286)
T PRK03204 15 ESRWFDSS---RGRIHYI--D-EG---TGPPILLCHGNPTWSFLY-RDII------------------VALRDRFRCVAP 66 (286)
T ss_pred cceEEEcC---CcEEEEE--E-CC---CCCEEEEECCCCccHHHH-HHHH------------------HHHhCCcEEEEE
Confidence 35567764 3456544 1 11 257899999998654442 2111 112345789999
Q ss_pred cCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeee
Q 020142 132 ESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNI 211 (330)
Q Consensus 132 DqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inL 211 (330)
|.| |.|.|-... ....+.+..++++..+++ .. ...+++|+|||+||..+-.+|.. + .-.+
T Consensus 67 D~~-G~G~S~~~~--~~~~~~~~~~~~~~~~~~----~~---~~~~~~lvG~S~Gg~va~~~a~~---~-------p~~v 126 (286)
T PRK03204 67 DYL-GFGLSERPS--GFGYQIDEHARVIGEFVD----HL---GLDRYLSMGQDWGGPISMAVAVE---R-------ADRV 126 (286)
T ss_pred CCC-CCCCCCCCC--ccccCHHHHHHHHHHHHH----Hh---CCCCEEEEEECccHHHHHHHHHh---C-------hhhe
Confidence 988 999884321 112233444555544443 32 34579999999999765444432 1 1247
Q ss_pred eEEEecCCCC
Q 020142 212 KGVAIGNPLL 221 (330)
Q Consensus 212 kGi~igng~~ 221 (330)
++++++++..
T Consensus 127 ~~lvl~~~~~ 136 (286)
T PRK03204 127 RGVVLGNTWF 136 (286)
T ss_pred eEEEEECccc
Confidence 8888888754
No 31
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.71 E-value=0.00017 Score=66.40 Aligned_cols=106 Identities=17% Similarity=0.182 Sum_probs=61.5
Q ss_pred CCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHH
Q 020142 79 EKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARD 158 (330)
Q Consensus 79 ~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d 158 (330)
+.|.||.++|.++.+..+ ..+.. .+. .-..+..+++-+|.| |.|.|-..... .. .....+++
T Consensus 29 ~~~~ivllHG~~~~~~~~-~~~~~-----------~~~---~l~~~~~~vi~~D~~-G~G~S~~~~~~-~~-~~~~~~~~ 90 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGW-SNYYR-----------NIG---PFVDAGYRVILKDSP-GFNKSDAVVMD-EQ-RGLVNARA 90 (282)
T ss_pred CCCeEEEECCCCCchhhH-HHHHH-----------HHH---HHHhCCCEEEEECCC-CCCCCCCCcCc-cc-ccchhHHH
Confidence 347799999986544332 11100 000 001234889999988 99998532111 11 11123556
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCC
Q 020142 159 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (330)
Q Consensus 159 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 219 (330)
+.++++. +..++++++|+|+||..+-.+|.+-.+ .++++++.++
T Consensus 91 l~~~l~~-------l~~~~~~lvG~S~Gg~ia~~~a~~~p~----------~v~~lvl~~~ 134 (282)
T TIGR03343 91 VKGLMDA-------LDIEKAHLVGNSMGGATALNFALEYPD----------RIGKLILMGP 134 (282)
T ss_pred HHHHHHH-------cCCCCeeEEEECchHHHHHHHHHhChH----------hhceEEEECC
Confidence 5555543 345689999999999998888764322 2556666554
No 32
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.67 E-value=0.00039 Score=68.77 Aligned_cols=132 Identities=17% Similarity=0.172 Sum_probs=79.9
Q ss_pred CceeEEEEEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccc
Q 020142 48 AFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASN 127 (330)
Q Consensus 48 ~~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~an 127 (330)
+.++-+++... .++-++||. +. .+...|.||.++|.|+.+..+ -.+.+ .+.+..+
T Consensus 101 ~~~~~~~~~~~--~~~~~~~y~--~~--G~~~~~~ivllHG~~~~~~~w-~~~~~------------------~L~~~~~ 155 (383)
T PLN03084 101 GLKMGAQSQAS--SDLFRWFCV--ES--GSNNNPPVLLIHGFPSQAYSY-RKVLP------------------VLSKNYH 155 (383)
T ss_pred cccccceeEEc--CCceEEEEE--ec--CCCCCCeEEEECCCCCCHHHH-HHHHH------------------HHhcCCE
Confidence 44555555542 233455544 22 334568999999998877653 22111 1223478
Q ss_pred cceecCCCCcCcccccCCC-CCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCC
Q 020142 128 LLFVESPAGVGWSYSNTTS-DYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKG 206 (330)
Q Consensus 128 llfiDqPvGtGfSy~~~~~-~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~ 206 (330)
++-+|.| |.|+|...... ....+.+..++++..|+++ +...+++|+|+|+||..+-.+|.+ .
T Consensus 156 Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~-------l~~~~~~LvG~s~GG~ia~~~a~~----~----- 218 (383)
T PLN03084 156 AIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDE-------LKSDKVSLVVQGYFSPPVVKYASA----H----- 218 (383)
T ss_pred EEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHH-------hCCCCceEEEECHHHHHHHHHHHh----C-----
Confidence 9999988 99999643221 1123555666777766654 233579999999998654444432 1
Q ss_pred ceeeeeEEEecCCCCC
Q 020142 207 FKFNIKGVAIGNPLLR 222 (330)
Q Consensus 207 ~~inLkGi~igng~~d 222 (330)
.-.++++++.|+...
T Consensus 219 -P~~v~~lILi~~~~~ 233 (383)
T PLN03084 219 -PDKIKKLILLNPPLT 233 (383)
T ss_pred -hHhhcEEEEECCCCc
Confidence 124889999887653
No 33
>PRK10749 lysophospholipase L2; Provisional
Probab=97.64 E-value=0.00025 Score=68.16 Aligned_cols=126 Identities=13% Similarity=0.090 Sum_probs=77.5
Q ss_pred CCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCccc
Q 020142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSY 141 (330)
Q Consensus 62 ~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy 141 (330)
.+.+++|+.+... ..+|+||.++|-.+.+... ..+ .+. + . .+-.+++-+|.| |.|.|-
T Consensus 39 ~g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y-~~~---~~~--------l--~----~~g~~v~~~D~~-G~G~S~ 96 (330)
T PRK10749 39 DDIPIRFVRFRAP---HHDRVVVICPGRIESYVKY-AEL---AYD--------L--F----HLGYDVLIIDHR-GQGRSG 96 (330)
T ss_pred CCCEEEEEEccCC---CCCcEEEEECCccchHHHH-HHH---HHH--------H--H----HCCCeEEEEcCC-CCCCCC
Confidence 3457888766542 3568999999986544432 111 100 0 0 123578899988 999985
Q ss_pred ccCCC---CCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecC
Q 020142 142 SNTTS---DYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGN 218 (330)
Q Consensus 142 ~~~~~---~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~ign 218 (330)
..... ....+-+..++|+..+++.....+ ...+++++|+|+||..+-.+|.. .. -.++|+++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~---~p-------~~v~~lvl~~ 163 (330)
T PRK10749 97 RLLDDPHRGHVERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQR---HP-------GVFDAIALCA 163 (330)
T ss_pred CCCCCCCcCccccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHh---CC-------CCcceEEEEC
Confidence 32211 111244566677777776654433 35689999999999876655543 21 1378999998
Q ss_pred CCCC
Q 020142 219 PLLR 222 (330)
Q Consensus 219 g~~d 222 (330)
+...
T Consensus 164 p~~~ 167 (330)
T PRK10749 164 PMFG 167 (330)
T ss_pred chhc
Confidence 8754
No 34
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.54 E-value=0.00049 Score=66.57 Aligned_cols=135 Identities=17% Similarity=0.270 Sum_probs=85.7
Q ss_pred eeEEEEEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccc
Q 020142 50 RQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLL 129 (330)
Q Consensus 50 ~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anll 129 (330)
+-.+-|+.+.+. ... |.++-...+++++-++.++|= |+++ |+| ..|=.+..+.-||-
T Consensus 64 ~~~~~~v~i~~~--~~i--w~~~~~~~~~~~~plVliHGy-GAg~---g~f---------------~~Nf~~La~~~~vy 120 (365)
T KOG4409|consen 64 PYSKKYVRIPNG--IEI--WTITVSNESANKTPLVLIHGY-GAGL---GLF---------------FRNFDDLAKIRNVY 120 (365)
T ss_pred CcceeeeecCCC--cee--EEEeecccccCCCcEEEEecc-chhH---HHH---------------HHhhhhhhhcCceE
Confidence 334556666522 222 344444444677777789984 3332 222 12344556688999
Q ss_pred eecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCcee
Q 020142 130 FVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKF 209 (330)
Q Consensus 130 fiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~i 209 (330)
.||.| |-|.|-... +..+.+.+-+.+.+-+++|..+.. =.+.+|+|||+||..+...|.+-.++
T Consensus 121 aiDll-G~G~SSRP~---F~~d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer--------- 184 (365)
T KOG4409|consen 121 AIDLL-GFGRSSRPK---FSIDPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER--------- 184 (365)
T ss_pred Eeccc-CCCCCCCCC---CCCCcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh---------
Confidence 99988 999985432 233344444578899999998763 34799999999998666555544432
Q ss_pred eeeEEEecCCCCCcc
Q 020142 210 NIKGVAIGNPLLRLD 224 (330)
Q Consensus 210 nLkGi~igng~~d~~ 224 (330)
++-++|.+||--+.
T Consensus 185 -V~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 185 -VEKLILVSPWGFPE 198 (365)
T ss_pred -hceEEEeccccccc
Confidence 66778888886554
No 35
>PLN02578 hydrolase
Probab=97.54 E-value=0.00024 Score=68.99 Aligned_cols=101 Identities=17% Similarity=0.123 Sum_probs=65.3
Q ss_pred CCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHH
Q 020142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDM 159 (330)
Q Consensus 80 ~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 159 (330)
.|-||.++|-++.+..+ .... | .+.+..+++-+|.| |.|.|-... . ..+.+..++++
T Consensus 86 g~~vvliHG~~~~~~~w-~~~~---~---------------~l~~~~~v~~~D~~-G~G~S~~~~-~--~~~~~~~a~~l 142 (354)
T PLN02578 86 GLPIVLIHGFGASAFHW-RYNI---P---------------ELAKKYKVYALDLL-GFGWSDKAL-I--EYDAMVWRDQV 142 (354)
T ss_pred CCeEEEECCCCCCHHHH-HHHH---H---------------HHhcCCEEEEECCC-CCCCCCCcc-c--ccCHHHHHHHH
Confidence 35578999876654442 1111 1 12245789999998 999884321 1 23445556777
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
.+|+++. ...+++|+|+|+||..+..+|.+-.+ .++++++.|+.
T Consensus 143 ~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~----------~v~~lvLv~~~ 186 (354)
T PLN02578 143 ADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPE----------LVAGVALLNSA 186 (354)
T ss_pred HHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChH----------hcceEEEECCC
Confidence 7777643 24579999999999987777765332 37788887753
No 36
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.54 E-value=0.00067 Score=67.75 Aligned_cols=131 Identities=16% Similarity=0.173 Sum_probs=76.4
Q ss_pred EEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhh-hhhhhccCCceecCCCCCccccCCcccc-ccccceec
Q 020142 55 YVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVG-GGAFTELGPFYPRGDGRGLRRNSMSWNK-ASNLLFVE 132 (330)
Q Consensus 55 yl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~-~g~~~E~GP~~~~~~~~~~~~n~~sW~~-~anllfiD 132 (330)
.|.+.-..+..+--|++... ..+..|+||. .||.+..... ...+. ..+.+ -.++|-+|
T Consensus 170 ~v~i~~~~g~~l~g~l~~P~-~~~~~P~Vli-~gG~~~~~~~~~~~~~------------------~~La~~Gy~vl~~D 229 (414)
T PRK05077 170 ELEFPIPGGGPITGFLHLPK-GDGPFPTVLV-CGGLDSLQTDYYRLFR------------------DYLAPRGIAMLTID 229 (414)
T ss_pred EEEEEcCCCcEEEEEEEECC-CCCCccEEEE-eCCcccchhhhHHHHH------------------HHHHhCCCEEEEEC
Confidence 44444333335665554333 2345788874 5666653211 11110 01222 26789999
Q ss_pred CCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeee
Q 020142 133 SPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIK 212 (330)
Q Consensus 133 qPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLk 212 (330)
.| |+|.|-... . + +........+..|+...|.....++.|+|+|+||.+++.+|..-. -.++
T Consensus 230 ~p-G~G~s~~~~---~--~--~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p----------~ri~ 291 (414)
T PRK05077 230 MP-SVGFSSKWK---L--T--QDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP----------PRLK 291 (414)
T ss_pred CC-CCCCCCCCC---c--c--ccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC----------cCce
Confidence 99 999984321 1 1 112223344556677777777778999999999999988874311 1377
Q ss_pred EEEecCCCCCc
Q 020142 213 GVAIGNPLLRL 223 (330)
Q Consensus 213 Gi~igng~~d~ 223 (330)
++++.+|.++.
T Consensus 292 a~V~~~~~~~~ 302 (414)
T PRK05077 292 AVACLGPVVHT 302 (414)
T ss_pred EEEEECCccch
Confidence 88888777653
No 37
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.53 E-value=0.00059 Score=66.52 Aligned_cols=104 Identities=14% Similarity=0.062 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHH
Q 020142 79 EKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARD 158 (330)
Q Consensus 79 ~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d 158 (330)
..|.||.++|.++.+..+ ..+.+ ...+..+++-+|.| |.|.|-.... ...+.+..+++
T Consensus 87 ~gp~lvllHG~~~~~~~w-~~~~~------------------~L~~~~~via~Dl~-G~G~S~~~~~--~~~~~~~~a~~ 144 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHW-RRNIG------------------VLAKNYTVYAIDLL-GFGASDKPPG--FSYTMETWAEL 144 (360)
T ss_pred CCCeEEEECCCCCCHHHH-HHHHH------------------HHhcCCEEEEECCC-CCCCCCCCCC--ccccHHHHHHH
Confidence 347889999998877764 22111 12234688999988 9998843221 12345566777
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 159 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 159 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
+.++|.. +...+++|+|+|+||..+-.+|.. ... -.++++++.|+.
T Consensus 145 l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~--~~P-------~rV~~LVLi~~~ 190 (360)
T PLN02679 145 ILDFLEE-------VVQKPTVLIGNSVGSLACVIAASE--STR-------DLVRGLVLLNCA 190 (360)
T ss_pred HHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHh--cCh-------hhcCEEEEECCc
Confidence 7777763 234589999999999655444421 111 137888888764
No 38
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.51 E-value=0.00056 Score=65.76 Aligned_cols=103 Identities=15% Similarity=0.101 Sum_probs=65.3
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHH
Q 020142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTAR 157 (330)
Q Consensus 78 ~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~ 157 (330)
.+.|.||+++|.+|.+..+ ..+.+ ...+..+++-+|.| |.|.|-.... ..+.++.++
T Consensus 129 ~~~~~vl~~HG~~~~~~~~-~~~~~------------------~l~~~~~v~~~d~~-g~G~s~~~~~---~~~~~~~~~ 185 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNW-LFNHA------------------ALAAGRPVIALDLP-GHGASSKAVG---AGSLDELAA 185 (371)
T ss_pred CCCCeEEEECCCCCccchH-HHHHH------------------HHhcCCEEEEEcCC-CCCCCCCCCC---CCCHHHHHH
Confidence 4568899999998877763 33221 01123689999988 9998842211 234445555
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
++..+++ . +...+++|.|+|+||..+..+|..-. -.++++++.++.
T Consensus 186 ~~~~~~~----~---~~~~~~~lvG~S~Gg~~a~~~a~~~~----------~~v~~lv~~~~~ 231 (371)
T PRK14875 186 AVLAFLD----A---LGIERAHLVGHSMGGAVALRLAARAP----------QRVASLTLIAPA 231 (371)
T ss_pred HHHHHHH----h---cCCccEEEEeechHHHHHHHHHHhCc----------hheeEEEEECcC
Confidence 5555553 2 33457999999999998887776521 136677766654
No 39
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.46 E-value=0.00019 Score=65.55 Aligned_cols=94 Identities=17% Similarity=0.071 Sum_probs=61.3
Q ss_pred CEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHHH
Q 020142 81 PLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMH 160 (330)
Q Consensus 81 PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~ 160 (330)
|.||.++|.++++..+ --+. ..+.+..+++.+|.| |.|.|-.. .. .+.++.++++.
T Consensus 14 ~~ivllHG~~~~~~~w-~~~~------------------~~L~~~~~vi~~Dl~-G~G~S~~~--~~--~~~~~~~~~l~ 69 (256)
T PRK10349 14 VHLVLLHGWGLNAEVW-RCID------------------EELSSHFTLHLVDLP-GFGRSRGF--GA--LSLADMAEAVL 69 (256)
T ss_pred CeEEEECCCCCChhHH-HHHH------------------HHHhcCCEEEEecCC-CCCCCCCC--CC--CCHHHHHHHHH
Confidence 5699999988777764 2211 123456899999988 99998532 11 23344444433
Q ss_pred HHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCC
Q 020142 161 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (330)
Q Consensus 161 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 219 (330)
+ +...+++++|+|+||..+..+|.+-. -.++++++.|+
T Consensus 70 ~-----------~~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~v~~lili~~ 107 (256)
T PRK10349 70 Q-----------QAPDKAIWLGWSLGGLVASQIALTHP----------ERVQALVTVAS 107 (256)
T ss_pred h-----------cCCCCeEEEEECHHHHHHHHHHHhCh----------HhhheEEEecC
Confidence 2 12357999999999998887775321 24678887766
No 40
>PLN02965 Probable pheophorbidase
Probab=97.40 E-value=0.00048 Score=63.23 Aligned_cols=99 Identities=13% Similarity=0.150 Sum_probs=62.7
Q ss_pred EEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcc-ccccccceecCCCCcCcccccCCCCCCCCchhhHHHHHH
Q 020142 83 TLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSW-NKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHV 161 (330)
Q Consensus 83 vlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW-~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~ 161 (330)
|+.++|.++.+..+-.... .. .+...++-+|.| |.|.|-..... ..+.++.|+|+.+
T Consensus 6 vvllHG~~~~~~~w~~~~~-------------------~L~~~~~~via~Dl~-G~G~S~~~~~~--~~~~~~~a~dl~~ 63 (255)
T PLN02965 6 FVFVHGASHGAWCWYKLAT-------------------LLDAAGFKSTCVDLT-GAGISLTDSNT--VSSSDQYNRPLFA 63 (255)
T ss_pred EEEECCCCCCcCcHHHHHH-------------------HHhhCCceEEEecCC-cCCCCCCCccc--cCCHHHHHHHHHH
Confidence 8889998765555311110 12 223578999988 99988432211 2345566667666
Q ss_pred HHHHHHHHCCCCCC-CCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 162 FMMNWYEKFPEFKS-RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 162 fL~~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
++.+ +.. ++++++|+|+||..+..+|.+..+ .++++++.++.
T Consensus 64 ~l~~-------l~~~~~~~lvGhSmGG~ia~~~a~~~p~----------~v~~lvl~~~~ 106 (255)
T PLN02965 64 LLSD-------LPPDHKVILVGHSIGGGSVTEALCKFTD----------KISMAIYVAAA 106 (255)
T ss_pred HHHh-------cCCCCCEEEEecCcchHHHHHHHHhCch----------heeEEEEEccc
Confidence 6653 222 489999999999888877754321 35778877764
No 41
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.37 E-value=0.00055 Score=64.50 Aligned_cols=133 Identities=11% Similarity=0.052 Sum_probs=77.3
Q ss_pred CeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccc-cccccceecCCCCcCccc
Q 020142 63 GRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWN-KASNLLFVESPAGVGWSY 141 (330)
Q Consensus 63 ~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~-~~anllfiDqPvGtGfSy 141 (330)
..++|.|+++.... ..+|+||.++|-.+-..-..-.+... -..+. +-.+++-+|.| |.|.|-
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~l---------------a~~La~~Gy~Vl~~Dl~-G~G~S~ 71 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQ---------------ARAFAAGGFGVLQIDLY-GCGDSA 71 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHH---------------HHHHHHCCCEEEEECCC-CCCCCC
Confidence 45688888866432 33799999998533110000011000 01122 23688999988 999885
Q ss_pred ccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 142 SNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 142 ~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
.... . .+.+..++|+..++ +|++... ..+++|+|+|.||..+..+|.+.. -.++++++-+|.+
T Consensus 72 g~~~-~--~~~~~~~~Dv~~ai-~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p----------~~v~~lVL~~P~~ 134 (266)
T TIGR03101 72 GDFA-A--ARWDVWKEDVAAAY-RWLIEQG---HPPVTLWGLRLGALLALDAANPLA----------AKCNRLVLWQPVV 134 (266)
T ss_pred Cccc-c--CCHHHHHHHHHHHH-HHHHhcC---CCCEEEEEECHHHHHHHHHHHhCc----------cccceEEEecccc
Confidence 4321 1 23333445554443 3444432 458999999999998877764421 2367899988887
Q ss_pred Cccccchh
Q 020142 222 RLDQDVPA 229 (330)
Q Consensus 222 d~~~~~~~ 229 (330)
+-......
T Consensus 135 ~g~~~l~~ 142 (266)
T TIGR03101 135 SGKQQLQQ 142 (266)
T ss_pred chHHHHHH
Confidence 76544433
No 42
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.37 E-value=0.001 Score=62.40 Aligned_cols=106 Identities=14% Similarity=0.132 Sum_probs=65.1
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHH
Q 020142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTAR 157 (330)
Q Consensus 78 ~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~ 157 (330)
.++|.|++++|..+.++.+ ..+.+ .+.. +-.+++-+|.| |.|.|...... ..+.++.++
T Consensus 16 ~~~p~vvliHG~~~~~~~w-~~~~~-----------~L~~------~g~~vi~~dl~-g~G~s~~~~~~--~~~~~~~~~ 74 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCW-YKIRC-----------LMEN------SGYKVTCIDLK-SAGIDQSDADS--VTTFDEYNK 74 (273)
T ss_pred CCCCeEEEECCCCCCcCcH-HHHHH-----------HHHh------CCCEEEEeccc-CCCCCCCCccc--CCCHHHHHH
Confidence 6679999999987766653 22110 0111 13588999998 88877432211 134455555
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
++.++++ ... ..++++|+||||||..+-.++....+ .++++++.++.
T Consensus 75 ~l~~~i~----~l~--~~~~v~lvGhS~GG~v~~~~a~~~p~----------~v~~lv~~~~~ 121 (273)
T PLN02211 75 PLIDFLS----SLP--ENEKVILVGHSAGGLSVTQAIHRFPK----------KICLAVYVAAT 121 (273)
T ss_pred HHHHHHH----hcC--CCCCEEEEEECchHHHHHHHHHhChh----------heeEEEEeccc
Confidence 5555554 322 13689999999999977777643221 35677776554
No 43
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.36 E-value=0.00093 Score=60.00 Aligned_cols=117 Identities=15% Similarity=0.097 Sum_probs=58.4
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCC----CCc
Q 020142 77 PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYN----CGD 152 (330)
Q Consensus 77 ~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~----~~~ 152 (330)
.+..|+|++|+|+++.++.. .. ..+ +. .+. + ..-..+|..|.| |.|.+... .+-+. ...
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~-~~--~~~---~~----~~a-~----~~g~~Vv~Pd~~-g~~~~~~~-~~~~~~~~~~~~ 72 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAY-VI--DWG---WK----AAA-D----RYGFVLVAPEQT-SYNSSNNC-WDWFFTHHRARG 72 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHH-hh--hcC---hH----HHH-H----hCCeEEEecCCc-CccccCCC-CCCCCccccCCC
Confidence 45689999999999876542 10 000 00 000 0 012466777765 43322110 00000 001
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
.....++..++....+++ .....+++|+|+|.||..+-.+|.. +. -.+.++++..|..
T Consensus 73 ~~~~~~~~~~i~~~~~~~-~id~~~i~l~G~S~Gg~~a~~~a~~---~p-------~~~~~~~~~~g~~ 130 (212)
T TIGR01840 73 TGEVESLHQLIDAVKANY-SIDPNRVYVTGLSAGGGMTAVLGCT---YP-------DVFAGGASNAGLP 130 (212)
T ss_pred CccHHHHHHHHHHHHHhc-CcChhheEEEEECHHHHHHHHHHHh---Cc-------hhheEEEeecCCc
Confidence 122344444554444444 2344579999999999876655543 21 1256666665543
No 44
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.36 E-value=0.0016 Score=66.30 Aligned_cols=134 Identities=15% Similarity=0.121 Sum_probs=77.7
Q ss_pred eeEEEEEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccc
Q 020142 50 RQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLL 129 (330)
Q Consensus 50 ~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anll 129 (330)
+...-|+..+ +.++||+.....+ ...+|.||+++|.+|.+..+...+.+ . +. ..+.+...++
T Consensus 175 ~~~~~~~~~~---~~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~W~~~~~~---~--------L~---~~~~~~yrVi 236 (481)
T PLN03087 175 KFCTSWLSSS---NESLFVHVQQPKD-NKAKEDVLFIHGFISSSAFWTETLFP---N--------FS---DAAKSTYRLF 236 (481)
T ss_pred ceeeeeEeeC---CeEEEEEEecCCC-CCCCCeEEEECCCCccHHHHHHHHHH---H--------HH---HHhhCCCEEE
Confidence 3444566553 3578877544332 23357899999999887764111100 0 00 0134467899
Q ss_pred eecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCcee
Q 020142 130 FVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKF 209 (330)
Q Consensus 130 fiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~i 209 (330)
-+|.| |.|.|-..... ..+.++.++++. ..+++. +...+++|+|+|+||..+-.+|.+-.+
T Consensus 237 a~Dl~-G~G~S~~p~~~--~ytl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~Pe---------- 297 (481)
T PLN03087 237 AVDLL-GFGRSPKPADS--LYTLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCILALALAVKHPG---------- 297 (481)
T ss_pred EECCC-CCCCCcCCCCC--cCCHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHHHHHHHHHhChH----------
Confidence 99988 88888432111 123344444442 133333 334579999999999988777764222
Q ss_pred eeeEEEecCCC
Q 020142 210 NIKGVAIGNPL 220 (330)
Q Consensus 210 nLkGi~igng~ 220 (330)
.++++++.++.
T Consensus 298 ~V~~LVLi~~~ 308 (481)
T PLN03087 298 AVKSLTLLAPP 308 (481)
T ss_pred hccEEEEECCC
Confidence 36788887753
No 45
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.32 E-value=0.00034 Score=61.56 Aligned_cols=96 Identities=17% Similarity=0.109 Sum_probs=58.1
Q ss_pred CCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHH
Q 020142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDM 159 (330)
Q Consensus 80 ~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 159 (330)
.|.||.++|.++.+..+ -.+.+ ...+..+++.+|.| |.|.|.... ..+.++.++++
T Consensus 4 ~~~iv~~HG~~~~~~~~-~~~~~------------------~l~~~~~vi~~d~~-G~G~s~~~~----~~~~~~~~~~~ 59 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVF-RCLDE------------------ELSAHFTLHLVDLP-GHGRSRGFG----PLSLADAAEAI 59 (245)
T ss_pred CceEEEEcCCCCchhhH-HHHHH------------------hhccCeEEEEecCC-cCccCCCCC----CcCHHHHHHHH
Confidence 47899999986666553 22111 11234789999988 888874321 12333333333
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
...+ ..+++++|+|+||..+..+|.+-.+ .++++++.++.
T Consensus 60 ~~~~-----------~~~~~lvG~S~Gg~~a~~~a~~~p~----------~v~~~il~~~~ 99 (245)
T TIGR01738 60 AAQA-----------PDPAIWLGWSLGGLVALHIAATHPD----------RVRALVTVASS 99 (245)
T ss_pred HHhC-----------CCCeEEEEEcHHHHHHHHHHHHCHH----------hhheeeEecCC
Confidence 2211 2479999999999988777754222 26677776654
No 46
>PRK05855 short chain dehydrogenase; Validated
Probab=97.16 E-value=0.0017 Score=66.11 Aligned_cols=98 Identities=15% Similarity=0.139 Sum_probs=63.8
Q ss_pred CCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCccc
Q 020142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSY 141 (330)
Q Consensus 62 ~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy 141 (330)
.+..+.|+-+. +.+.|.||.++|.++.+..+ .-+.+ -+.+..+++.+|.| |.|.|.
T Consensus 11 ~g~~l~~~~~g----~~~~~~ivllHG~~~~~~~w-~~~~~------------------~L~~~~~Vi~~D~~-G~G~S~ 66 (582)
T PRK05855 11 DGVRLAVYEWG----DPDRPTVVLVHGYPDNHEVW-DGVAP------------------LLADRFRVVAYDVR-GAGRSS 66 (582)
T ss_pred CCEEEEEEEcC----CCCCCeEEEEcCCCchHHHH-HHHHH------------------HhhcceEEEEecCC-CCCCCC
Confidence 34567766332 23478999999998776653 22211 01234689999988 999996
Q ss_pred ccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccch
Q 020142 142 SNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYI 190 (330)
Q Consensus 142 ~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 190 (330)
..... ...+.+..++|+..+++.. . ...+++|+|+|+||..+
T Consensus 67 ~~~~~-~~~~~~~~a~dl~~~i~~l---~---~~~~~~lvGhS~Gg~~a 108 (582)
T PRK05855 67 APKRT-AAYTLARLADDFAAVIDAV---S---PDRPVHLLAHDWGSIQG 108 (582)
T ss_pred CCCcc-cccCHHHHHHHHHHHHHHh---C---CCCcEEEEecChHHHHH
Confidence 43221 1235667788888888752 1 13469999999999544
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=97.11 E-value=0.0045 Score=59.81 Aligned_cols=152 Identities=14% Similarity=0.098 Sum_probs=84.6
Q ss_pred CCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhh---c----cCCceecCCCCCcccc---CCccc-cccccce
Q 020142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFT---E----LGPFYPRGDGRGLRRN---SMSWN-KASNLLF 130 (330)
Q Consensus 62 ~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~---E----~GP~~~~~~~~~~~~n---~~sW~-~~anllf 130 (330)
+|..++++..+.. ..+.+|+.++|==+-+... .+. | -+|+.++++ +-..++ -..++ +-.+++-
T Consensus 6 ~g~~l~~~~~~~~---~~kg~v~i~HG~~eh~~~~--~~~~~~~~~~~~~~~~~~~~-ry~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 6 DGLLLKTYSWIVK---NAIGIIVLIHGLKSHLRLQ--FLKINAKIVNNDRAVLIDTD-NYYIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred CCCeEEEeeeecc---CCeEEEEEECCCchhhhhh--hhhcCcccCCCCeeEEEcCC-cceEeeHHHHHHHHHCCCcEEE
Confidence 4567777766553 3467999999854444321 110 1 122222211 000000 01222 2468999
Q ss_pred ecCCCCcCcccccCCC-CCCCCchhhHHHHHHHHHHHHHHC----------------CCCC-CCCeEEEcccccccchHH
Q 020142 131 VESPAGVGWSYSNTTS-DYNCGDASTARDMHVFMMNWYEKF----------------PEFK-SRELFLTGESYAGHYIPQ 192 (330)
Q Consensus 131 iDqPvGtGfSy~~~~~-~~~~~~~~~a~d~~~fL~~f~~~f----------------p~~~-~~~~yi~GESYgG~yvp~ 192 (330)
+|.| |.|.|-+.... .+..+-+..++|+..+++..-+.. .++. ..|+||+|||.||..+..
T Consensus 80 ~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 80 LDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred eccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 9987 99998754321 122345667788888887654310 0222 568999999999998877
Q ss_pred HHHHHHHhcccCCCceeeeeEEEecCCCCC
Q 020142 193 LADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 193 la~~i~~~n~~~~~~~inLkGi~igng~~d 222 (330)
++....+..... ....++|+++.+|.+.
T Consensus 159 ~~~~~~~~~~~~--~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 159 LLELLGKSNENN--DKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHHhccccccc--cccccceEEEeccceE
Confidence 665543321100 0236889987777654
No 48
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.03 E-value=0.0029 Score=73.32 Aligned_cols=107 Identities=17% Similarity=0.143 Sum_probs=68.3
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCC-----CCCCCC
Q 020142 77 PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTT-----SDYNCG 151 (330)
Q Consensus 77 ~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~-----~~~~~~ 151 (330)
.+..|.||++||.+|.+..+.... + .+.+..+++.+|.| |.|.|..... .....+
T Consensus 1368 ~~~~~~vVllHG~~~s~~~w~~~~-~------------------~L~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~~s 1427 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGEDWIPIM-K------------------AISGSARCISIDLP-GHGGSKIQNHAKETQTEPTLS 1427 (1655)
T ss_pred CCCCCeEEEECCCCCCHHHHHHHH-H------------------HHhCCCEEEEEcCC-CCCCCCCccccccccccccCC
Confidence 445789999999999887642221 1 11234689999988 9998854321 011234
Q ss_pred chhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 152 DASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 152 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
.+..++++..+++. +...+++|+|+|+||..+-.+|.+-.+ .++++++.++.
T Consensus 1428 i~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~----------~V~~lVlis~~ 1479 (1655)
T PLN02980 1428 VELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD----------KIEGAVIISGS 1479 (1655)
T ss_pred HHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH----------hhCEEEEECCC
Confidence 45556666666552 334589999999999987777754322 36677766553
No 49
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.02 E-value=0.0028 Score=61.10 Aligned_cols=76 Identities=17% Similarity=0.108 Sum_probs=50.8
Q ss_pred cccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCC-CCeEEEcccccccchHHHHHHHHHhcc
Q 020142 124 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKS-RELFLTGESYAGHYIPQLADVLLDHNA 202 (330)
Q Consensus 124 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~i~~~n~ 202 (330)
+...++.+|.| |.|-|. . .. .+.+..|+|+.++|+. +.- +.+.|+|+|+||..+-.+|.+-.+
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~--~-~~--~~~~~~a~dl~~ll~~-------l~l~~~~~lvG~SmGG~vA~~~A~~~P~--- 161 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL--D-VP--IDTADQADAIALLLDA-------LGIARLHAFVGYSYGALVGLQFASRHPA--- 161 (343)
T ss_pred cccEEEEEeCC-CCCCCC--C-CC--CCHHHHHHHHHHHHHH-------cCCCcceEEEEECHHHHHHHHHHHHChH---
Confidence 46789999998 766552 1 12 2445567777777764 222 235799999999887777765332
Q ss_pred cCCCceeeeeEEEecCCCCC
Q 020142 203 HSKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 203 ~~~~~~inLkGi~igng~~d 222 (330)
.++++++.++...
T Consensus 162 -------~V~~LvLi~s~~~ 174 (343)
T PRK08775 162 -------RVRTLVVVSGAHR 174 (343)
T ss_pred -------hhheEEEECcccc
Confidence 3778888877543
No 50
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.98 E-value=0.0034 Score=54.22 Aligned_cols=104 Identities=22% Similarity=0.276 Sum_probs=60.7
Q ss_pred CCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHH
Q 020142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDM 159 (330)
Q Consensus 80 ~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 159 (330)
.|.+++++|+|+++..+. ...+. +..... + .+++.+|+| |.|.|. .. . ......++++
T Consensus 21 ~~~i~~~hg~~~~~~~~~-~~~~~-----------~~~~~~---~-~~~~~~d~~-g~g~s~-~~--~--~~~~~~~~~~ 78 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWR-PVFKV-----------LPALAA---R-YRVIAPDLR-GHGRSD-PA--G--YSLSAYADDL 78 (282)
T ss_pred CCeEEEeCCCCCchhhhH-HHHHH-----------hhcccc---c-eEEEEeccc-CCCCCC-cc--c--ccHHHHHHHH
Confidence 679999999999888742 20000 011111 1 789999999 999996 11 0 1111113444
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCC
Q 020142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 222 (330)
..++ +.. ...+++++|+|+||..+-.++.+..+ .++++++.++...
T Consensus 79 ~~~~----~~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~----------~~~~~v~~~~~~~ 124 (282)
T COG0596 79 AALL----DAL---GLEKVVLVGHSMGGAVALALALRHPD----------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHH----HHh---CCCceEEEEecccHHHHHHHHHhcch----------hhheeeEecCCCC
Confidence 4444 332 23349999999997766655554433 3566666665443
No 51
>PLN02511 hydrolase
Probab=96.98 E-value=0.0052 Score=60.71 Aligned_cols=114 Identities=19% Similarity=0.233 Sum_probs=68.3
Q ss_pred EEEEeeCCCCeeEEEEEEEc--cCCCCCCCEEEEEcCCCChhhh-hh-hhhhccCCceecCCCCCccccCCccccccccc
Q 020142 54 GYVDVDVKNGRSLFYYFVEA--EVEPHEKPLTLWLNGGPGCSSV-GG-GAFTELGPFYPRGDGRGLRRNSMSWNKASNLL 129 (330)
Q Consensus 54 Gyl~v~~~~~~~lFy~~~es--~~~~~~~PlvlWlnGGPG~SS~-~~-g~~~E~GP~~~~~~~~~~~~n~~sW~~~anll 129 (330)
-++... +|..+.+.++.. ...+.++|+||.++|..|+|.. ++ .+.. .-..+-.+++
T Consensus 74 e~l~~~--DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~------------------~~~~~g~~vv 133 (388)
T PLN02511 74 ECLRTP--DGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL------------------RARSKGWRVV 133 (388)
T ss_pred EEEECC--CCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH------------------HHHHCCCEEE
Confidence 455543 344555533332 2245678999999999998742 11 1110 0012345789
Q ss_pred eecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHH
Q 020142 130 FVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLA 194 (330)
Q Consensus 130 fiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la 194 (330)
-+|.| |.|-|-......+ ....++|+..+++..-.++| ..+++++|+|.||..+-.++
T Consensus 134 ~~d~r-G~G~s~~~~~~~~---~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl 191 (388)
T PLN02511 134 VFNSR-GCADSPVTTPQFY---SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYL 191 (388)
T ss_pred EEecC-CCCCCCCCCcCEE---cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHH
Confidence 99988 8888753222211 12345677777766555565 45899999999998755544
No 52
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.95 E-value=0.0086 Score=56.08 Aligned_cols=42 Identities=21% Similarity=0.158 Sum_probs=30.3
Q ss_pred CCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 173 FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 173 ~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
...++++|+|+|+||..+-.+|.+- . -.+++++..+|..++.
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~---p-------~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKN---P-------DRFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhC---c-------ccceEEEEECCccCcc
Confidence 4456799999999998766665431 1 1267888888888764
No 53
>PRK10566 esterase; Provisional
Probab=96.95 E-value=0.0037 Score=56.81 Aligned_cols=106 Identities=12% Similarity=0.119 Sum_probs=60.4
Q ss_pred EEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccc-cccceecCCCCcCcccccCCC
Q 020142 68 YYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKA-SNLLFVESPAGVGWSYSNTTS 146 (330)
Q Consensus 68 y~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~-anllfiDqPvGtGfSy~~~~~ 146 (330)
|.+++........|+||.++|++|.... ...+. ..+.+. .+++.+|.| |.|-|+.....
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~-~~~~~------------------~~l~~~G~~v~~~d~~-g~G~~~~~~~~ 74 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLV-YSYFA------------------VALAQAGFRVIMPDAP-MHGARFSGDEA 74 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccch-HHHHH------------------HHHHhCCCEEEEecCC-cccccCCCccc
Confidence 3334443223457999999999887644 22210 112232 578889977 77766432211
Q ss_pred CCCCCc-----hhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHH
Q 020142 147 DYNCGD-----ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 195 (330)
Q Consensus 147 ~~~~~~-----~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (330)
..... ....+|+..++ .++.+.+....++++|+|+|+||..+-.++.
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 75 -RRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred -cchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 11110 12334444433 4455555455678999999999998876654
No 54
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=96.94 E-value=0.0075 Score=57.65 Aligned_cols=129 Identities=20% Similarity=0.199 Sum_probs=82.5
Q ss_pred CCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcc
Q 020142 61 KNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWS 140 (330)
Q Consensus 61 ~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfS 140 (330)
..+..++|+-++..+++. .+|++++|.=..+.-. --+.+ . +.. .=..++=+|+| |.|-|
T Consensus 17 ~d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~ry-~~la~---~--------l~~------~G~~V~~~D~R-GhG~S 75 (298)
T COG2267 17 ADGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGRY-EELAD---D--------LAA------RGFDVYALDLR-GHGRS 75 (298)
T ss_pred CCCceEEEEeecCCCCCC--cEEEEecCchHHHHHH-HHHHH---H--------HHh------CCCEEEEecCC-CCCCC
Confidence 345789999888765443 8999999986665542 22111 0 111 12456779999 99999
Q ss_pred cccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 141 YSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 141 y~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
.. .......+-.....|+..|++..-..+| ..|+||+|||.||-.+...+..-. -.++|+++-+|+
T Consensus 76 ~r-~~rg~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~----------~~i~~~vLssP~ 141 (298)
T COG2267 76 PR-GQRGHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP----------PRIDGLVLSSPA 141 (298)
T ss_pred CC-CCcCCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC----------ccccEEEEECcc
Confidence 73 2222222233444555566665444444 568999999999987665554322 358899999999
Q ss_pred CCcc
Q 020142 221 LRLD 224 (330)
Q Consensus 221 ~d~~ 224 (330)
+...
T Consensus 142 ~~l~ 145 (298)
T COG2267 142 LGLG 145 (298)
T ss_pred ccCC
Confidence 8877
No 55
>PRK10985 putative hydrolase; Provisional
Probab=96.93 E-value=0.0051 Score=58.98 Aligned_cols=109 Identities=16% Similarity=0.174 Sum_probs=54.3
Q ss_pred CeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhh-hhhccCCceecCCCCCccccCCccccccccceecCCCCcCccc
Q 020142 63 GRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGG-AFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSY 141 (330)
Q Consensus 63 ~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g-~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy 141 (330)
|..+.+++.+....+..+|+||.++|.+|.+..... .+.+ .+. . +-.+++-+|.+ |.|=|-
T Consensus 41 g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~-----------~l~--~----~G~~v~~~d~r-G~g~~~ 102 (324)
T PRK10985 41 GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE-----------AAQ--K----RGWLGVVMHFR-GCSGEP 102 (324)
T ss_pred CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH-----------HHH--H----CCCEEEEEeCC-CCCCCc
Confidence 344444433332334568999999999987532111 0100 011 0 11345667765 665332
Q ss_pred ccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHH
Q 020142 142 SNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 195 (330)
Q Consensus 142 ~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (330)
......+.... .+|+..+++.--++++ ..+++++|+|+||..+-..+.
T Consensus 103 ~~~~~~~~~~~---~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~ 150 (324)
T PRK10985 103 NRLHRIYHSGE---TEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLA 150 (324)
T ss_pred cCCcceECCCc---hHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHH
Confidence 11111121222 3444443332223343 457999999999986554443
No 56
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=96.89 E-value=0.0019 Score=56.68 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=51.0
Q ss_pred ccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCC
Q 020142 127 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKG 206 (330)
Q Consensus 127 nllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~ 206 (330)
+++-+|+| |.|+|... ......+-...++.+.+..+.++.+ .++++++|+|+||..+-.+|..-.+
T Consensus 2 ~vi~~d~r-G~g~S~~~---~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~------- 67 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPH---WDPDFPDYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE------- 67 (230)
T ss_dssp EEEEEECT-TSTTSSSC---CGSGSCTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG-------
T ss_pred EEEEEeCC-CCCCCCCC---ccCCcccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch-------
Confidence 57889988 99999741 0011223345566666666666554 4459999999999887666644322
Q ss_pred ceeeeeEEEecCCC
Q 020142 207 FKFNIKGVAIGNPL 220 (330)
Q Consensus 207 ~~inLkGi~igng~ 220 (330)
.++++++.++.
T Consensus 68 ---~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 ---RVKKLVLISPP 78 (230)
T ss_dssp ---GEEEEEEESES
T ss_pred ---hhcCcEEEeee
Confidence 48888888775
No 57
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.76 E-value=0.014 Score=55.64 Aligned_cols=128 Identities=20% Similarity=0.096 Sum_probs=82.2
Q ss_pred CCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCccc
Q 020142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSY 141 (330)
Q Consensus 62 ~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy 141 (330)
.|..+|.-.......++.+-+|+.++|.=+-+|..+--+. -+++..| .-+.-+|++ |.|.|-
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a----~~l~~~g-------------~~v~a~D~~-GhG~Sd 97 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTA----KRLAKSG-------------FAVYAIDYE-GHGRSD 97 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHH----HHHHhCC-------------CeEEEeecc-CCCcCC
Confidence 4567886555554455778899999997666543111110 0111111 124468987 999996
Q ss_pred ccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 142 SNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 142 ~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
+ -..|..+-+.+++|...|+..+-. .++++..|.|++|||.||..+-.++.+ +. --..|+++..|.
T Consensus 98 G--l~~yi~~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k---~p-------~~w~G~ilvaPm 163 (313)
T KOG1455|consen 98 G--LHAYVPSFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALK---DP-------NFWDGAILVAPM 163 (313)
T ss_pred C--CcccCCcHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhh---CC-------cccccceeeecc
Confidence 4 345666777788888888876543 458888899999999999876666544 11 135677766664
No 58
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.75 E-value=0.019 Score=55.95 Aligned_cols=139 Identities=16% Similarity=0.203 Sum_probs=85.2
Q ss_pred CCCeeEEEEEEEccC-CC-CCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccc-cccccceecCCCCc
Q 020142 61 KNGRSLFYYFVEAEV-EP-HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWN-KASNLLFVESPAGV 137 (330)
Q Consensus 61 ~~~~~lFy~~~es~~-~~-~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~-~~anllfiDqPvGt 137 (330)
...+.++-+.|.... .+ ..+|++||++||=-|-+.. .. ....+--++. +.+|.+-| .+
T Consensus 69 ~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~-~~--------------~~y~~~~~~~a~~~~~vvv----SV 129 (336)
T KOG1515|consen 69 DPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA-NS--------------PAYDSFCTRLAAELNCVVV----SV 129 (336)
T ss_pred cCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC-CC--------------chhHHHHHHHHHHcCeEEE----ec
Confidence 445678888887654 33 6899999999996665431 00 0011111121 33444433 33
Q ss_pred CcccccCCCCCCCCchhhHHHHHHHHHH-HHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEe
Q 020142 138 GWSYSNTTSDYNCGDASTARDMHVFMMN-WYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAI 216 (330)
Q Consensus 138 GfSy~~~~~~~~~~~~~~a~d~~~fL~~-f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~i 216 (330)
+|=-+ .+..+...-++.-+.+.-+++. |.+.+-+.++ ++|+|.|-||..+-.+|+++.+.. ...+.++|.++
T Consensus 130 dYRLA-PEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~r--v~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~il 202 (336)
T KOG1515|consen 130 DYRLA-PEHPFPAAYDDGWAALKWVLKNSWLKLGADPSR--VFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQIL 202 (336)
T ss_pred CcccC-CCCCCCccchHHHHHHHHHHHhHHHHhCCCccc--EEEEccCccHHHHHHHHHHHhhcc----CCCcceEEEEE
Confidence 44333 2223333333333444455555 8877666643 999999999999999999998753 12478999999
Q ss_pred cCCCCCccc
Q 020142 217 GNPLLRLDQ 225 (330)
Q Consensus 217 gng~~d~~~ 225 (330)
.-|++....
T Consensus 203 i~P~~~~~~ 211 (336)
T KOG1515|consen 203 IYPFFQGTD 211 (336)
T ss_pred EecccCCCC
Confidence 999876554
No 59
>PLN02442 S-formylglutathione hydrolase
Probab=96.72 E-value=0.02 Score=54.03 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 156 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
.+++...+.+++.. ....+++|+|+|+||+-+-.+|.+ .. =.+++++..+|..++.
T Consensus 126 ~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~---~p-------~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 126 VKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLK---NP-------DKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHh---Cc-------hhEEEEEEECCccCcc
Confidence 34444555555543 345579999999999866555543 11 1367889999988765
No 60
>PRK07581 hypothetical protein; Validated
Probab=96.55 E-value=0.0085 Score=57.44 Aligned_cols=83 Identities=14% Similarity=0.087 Sum_probs=48.0
Q ss_pred cccccceecCCCCcCcccccCCC--CCCCC---chhhHHHHHHHHHHHHHHCCCCCCCC-eEEEcccccccchHHHHHHH
Q 020142 124 KASNLLFVESPAGVGWSYSNTTS--DYNCG---DASTARDMHVFMMNWYEKFPEFKSRE-LFLTGESYAGHYIPQLADVL 197 (330)
Q Consensus 124 ~~anllfiDqPvGtGfSy~~~~~--~~~~~---~~~~a~d~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvp~la~~i 197 (330)
+...++-+|.| |.|.|-..... .+... ....++|+........+ ++.-.+ .+|+|+|+||..+-.+|.+-
T Consensus 70 ~~~~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~lgi~~~~~lvG~S~GG~va~~~a~~~ 145 (339)
T PRK07581 70 EKYFIIIPNMF-GNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTE---KFGIERLALVVGWSMGAQQTYHWAVRY 145 (339)
T ss_pred CceEEEEecCC-CCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHH---HhCCCceEEEEEeCHHHHHHHHHHHHC
Confidence 35789999998 99998533211 12111 11234444332221222 233446 57899999999988888764
Q ss_pred HHhcccCCCceeeeeEEEecCCC
Q 020142 198 LDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 198 ~~~n~~~~~~~inLkGi~igng~ 220 (330)
.+. ++++++.++.
T Consensus 146 P~~----------V~~Lvli~~~ 158 (339)
T PRK07581 146 PDM----------VERAAPIAGT 158 (339)
T ss_pred HHH----------HhhheeeecC
Confidence 432 5666666554
No 61
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=96.46 E-value=0.032 Score=52.15 Aligned_cols=79 Identities=20% Similarity=0.240 Sum_probs=53.3
Q ss_pred cccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCC
Q 020142 126 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 205 (330)
Q Consensus 126 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~ 205 (330)
.+++-+|.| |.|-|.... .+.+...+|+..+++.+-+..|.+ .+++++|+|.||..+-.+|. ..
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~~---- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----AD---- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----hC----
Confidence 678899988 999885321 133345567777776555555544 35999999999976444432 11
Q ss_pred CceeeeeEEEecCCCCCc
Q 020142 206 GFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 206 ~~~inLkGi~igng~~d~ 223 (330)
-.++|+++.|+++..
T Consensus 122 ---~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 122 ---LRVAGLVLLNPWVRT 136 (274)
T ss_pred ---CCccEEEEECCccCC
Confidence 148899999998764
No 62
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=96.42 E-value=0.043 Score=52.87 Aligned_cols=138 Identities=15% Similarity=0.136 Sum_probs=91.5
Q ss_pred ceeEEEEEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccc-cc
Q 020142 49 FRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKA-SN 127 (330)
Q Consensus 49 ~~~~sGyl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~-an 127 (330)
.....+|+.++. +++++.+. .++..|+++.|+|=|=.+=.+--.. -..... ..
T Consensus 20 ~~~~hk~~~~~g-----I~~h~~e~--g~~~gP~illlHGfPe~wyswr~q~-------------------~~la~~~~r 73 (322)
T KOG4178|consen 20 SAISHKFVTYKG-----IRLHYVEG--GPGDGPIVLLLHGFPESWYSWRHQI-------------------PGLASRGYR 73 (322)
T ss_pred hhcceeeEEEcc-----EEEEEEee--cCCCCCEEEEEccCCccchhhhhhh-------------------hhhhhcceE
Confidence 345678887742 78888777 7788999999999997553320000 001111 56
Q ss_pred cceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCc
Q 020142 128 LLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGF 207 (330)
Q Consensus 128 llfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~ 207 (330)
++.+|.+ |.|+|-..... ...+....+.|+..+|. .+.-++++++||+||+..+=.+|....++-+.
T Consensus 74 viA~Dlr-GyG~Sd~P~~~-~~Yt~~~l~~di~~lld-------~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~---- 140 (322)
T KOG4178|consen 74 VIAPDLR-GYGFSDAPPHI-SEYTIDELVGDIVALLD-------HLGLKKAFLVGHDWGAIVAWRLALFYPERVDG---- 140 (322)
T ss_pred EEecCCC-CCCCCCCCCCc-ceeeHHHHHHHHHHHHH-------HhccceeEEEeccchhHHHHHHHHhChhhcce----
Confidence 8899988 99999764431 23466677888888776 34456799999999999888888776654322
Q ss_pred eeeeeEEEecCCCCCcccc
Q 020142 208 KFNIKGVAIGNPLLRLDQD 226 (330)
Q Consensus 208 ~inLkGi~igng~~d~~~~ 226 (330)
.+++++... |+..+|...
T Consensus 141 lv~~nv~~~-~p~~~~~~~ 158 (322)
T KOG4178|consen 141 LVTLNVPFP-NPKLKPLDS 158 (322)
T ss_pred EEEecCCCC-Ccccchhhh
Confidence 344544444 666666543
No 63
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.31 E-value=0.0033 Score=59.30 Aligned_cols=113 Identities=12% Similarity=0.134 Sum_probs=65.0
Q ss_pred CCCCCEEEEEcCCCChh-hhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhh
Q 020142 77 PHEKPLTLWLNGGPGCS-SVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDAST 155 (330)
Q Consensus 77 ~~~~PlvlWlnGGPG~S-S~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~ 155 (330)
..++|++|+++|-.|.. ..+.-.+ . +.+.-....|++.+|-+.+..-.|.. ...+.+.+
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l---------------~-~~ll~~~~~nVi~vD~~~~~~~~y~~----a~~~~~~v 92 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDL---------------R-KAYLSRGDYNVIVVDWGRGANPNYPQ----AVNNTRVV 92 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHH---------------H-HHHHhcCCCEEEEEECccccccChHH----HHHhHHHH
Confidence 34679999999977654 2211110 0 00001134789999966331111110 01233455
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 156 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
++++..+|+...+.. .....+++|+|+|.||+.+-.+|.++.+ +++.|+..+|.
T Consensus 93 ~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----------~v~~iv~LDPa 146 (275)
T cd00707 93 GAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC----------ccceeEEecCC
Confidence 666667766554432 2334579999999999998888865532 36777776654
No 64
>PRK10115 protease 2; Provisional
Probab=96.27 E-value=0.03 Score=59.54 Aligned_cols=144 Identities=13% Similarity=0.003 Sum_probs=78.3
Q ss_pred EEEEeeCCCCeeEEEEEEEccC--CCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccc-cce
Q 020142 54 GYVDVDVKNGRSLFYYFVEAEV--EPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASN-LLF 130 (330)
Q Consensus 54 Gyl~v~~~~~~~lFy~~~es~~--~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~an-llf 130 (330)
-.+.+...+|..+-.|++.... .....|++|+.+||||.+... ++..+. -.|.+..= +++
T Consensus 417 e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~~~----------------~~l~~rG~~v~~ 479 (686)
T PRK10115 417 EHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSFSR----------------LSLLDRGFVYAI 479 (686)
T ss_pred EEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccHHH----------------HHHHHCCcEEEE
Confidence 3444444556677766654321 234569999999999988642 221111 12333322 223
Q ss_pred ecCCC-CcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCcee
Q 020142 131 VESPA-GVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKF 209 (330)
Q Consensus 131 iDqPv-GtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~i 209 (330)
.. +- |+||...=........-..+-+|+.+..+ |+....--....+.|.|-||||..+-.++ .++.+
T Consensus 480 ~n-~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~-~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~---~~~Pd------- 547 (686)
T PRK10115 480 VH-VRGGGELGQQWYEDGKFLKKKNTFNDYLDACD-ALLKLGYGSPSLCYGMGGSAGGMLMGVAI---NQRPE------- 547 (686)
T ss_pred EE-cCCCCccCHHHHHhhhhhcCCCcHHHHHHHHH-HHHHcCCCChHHeEEEEECHHHHHHHHHH---hcChh-------
Confidence 33 33 45554321111110011134566666664 34444333445799999999998544333 22211
Q ss_pred eeeEEEecCCCCCcccc
Q 020142 210 NIKGVAIGNPLLRLDQD 226 (330)
Q Consensus 210 nLkGi~igng~~d~~~~ 226 (330)
-++.++.+.|.+|....
T Consensus 548 lf~A~v~~vp~~D~~~~ 564 (686)
T PRK10115 548 LFHGVIAQVPFVDVVTT 564 (686)
T ss_pred heeEEEecCCchhHhhh
Confidence 38999999999998753
No 65
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.19 E-value=0.042 Score=53.94 Aligned_cols=137 Identities=12% Similarity=0.018 Sum_probs=71.0
Q ss_pred CeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhh--hccCCceecCCCCCccccCCccccccccceecCCCCcCcc
Q 020142 63 GRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAF--TELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWS 140 (330)
Q Consensus 63 ~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~--~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfS 140 (330)
+.+++|.-+-. .++..+|.||.++|.+|.+.. .... .+.+|=.+. ..+.....=-.+...|+-+|.|-+.|.|
T Consensus 32 ~~~~~y~~~G~-~~~~~~p~vvl~HG~~~~~~~-~~~~~~~~~~~~~w~---~~~~~~~~l~~~~~~vi~~Dl~G~~~~s 106 (379)
T PRK00175 32 PVELAYETYGT-LNADRSNAVLICHALTGDHHV-AGPHSPDDPKPGWWD---NMVGPGKPIDTDRYFVICSNVLGGCKGS 106 (379)
T ss_pred CceEEEEeccc-cCCCCCCEEEEeCCcCCchhh-cccccccCCCCcchh---hccCCCCccCccceEEEeccCCCCCCCC
Confidence 35677764421 123347999999999987764 1110 000000000 0000000000235689999988334545
Q ss_pred cccCC------CCC-----CCCchhhHHHHHHHHHHHHHHCCCCCCCC-eEEEcccccccchHHHHHHHHHhcccCCCce
Q 020142 141 YSNTT------SDY-----NCGDASTARDMHVFMMNWYEKFPEFKSRE-LFLTGESYAGHYIPQLADVLLDHNAHSKGFK 208 (330)
Q Consensus 141 y~~~~------~~~-----~~~~~~~a~d~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvp~la~~i~~~n~~~~~~~ 208 (330)
..... ..+ ..+.+..++++..+++ . +.-.+ .+|+|+|+||..+-.+|.+-.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~---l~~~~~~~lvG~S~Gg~ia~~~a~~~p~--------- 170 (379)
T PRK00175 107 TGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLD----A---LGITRLAAVVGGSMGGMQALEWAIDYPD--------- 170 (379)
T ss_pred CCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHH----H---hCCCCceEEEEECHHHHHHHHHHHhChH---------
Confidence 32110 000 2234444555555554 3 23345 5899999999887777765322
Q ss_pred eeeeEEEecCCCC
Q 020142 209 FNIKGVAIGNPLL 221 (330)
Q Consensus 209 inLkGi~igng~~ 221 (330)
.++++++.|+..
T Consensus 171 -~v~~lvl~~~~~ 182 (379)
T PRK00175 171 -RVRSALVIASSA 182 (379)
T ss_pred -hhhEEEEECCCc
Confidence 378888887643
No 66
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=96.17 E-value=0.0098 Score=53.05 Aligned_cols=116 Identities=13% Similarity=0.023 Sum_probs=69.4
Q ss_pred ccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccC
Q 020142 125 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 204 (330)
Q Consensus 125 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~ 204 (330)
=..|+.+|.+-+.||+..-........-....+|+...++.. .+.+....+++.|+|.||||+.+-.++.+ ..
T Consensus 14 Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l-~~~~~iD~~ri~i~G~S~GG~~a~~~~~~---~~--- 86 (213)
T PF00326_consen 14 GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYL-IKQYYIDPDRIGIMGHSYGGYLALLAATQ---HP--- 86 (213)
T ss_dssp T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHH-HHTTSEEEEEEEEEEETHHHHHHHHHHHH---TC---
T ss_pred CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHH-hccccccceeEEEEcccccccccchhhcc---cc---
Confidence 357888998877777764322222222345567777777544 44445556679999999999987766542 21
Q ss_pred CCceeeeeEEEecCCCCCccccchh---HHH-HhhhcCCC--ChHHHHHHHhh
Q 020142 205 KGFKFNIKGVAIGNPLLRLDQDVPA---IYE-FFWSHGMI--SDEIGLTIMSD 251 (330)
Q Consensus 205 ~~~~inLkGi~igng~~d~~~~~~~---~~~-~~~~~gli--~~~~~~~~~~~ 251 (330)
-..+.++.++|.+|+...... +.. -....+.. +++.++.+...
T Consensus 87 ----~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 135 (213)
T PF00326_consen 87 ----DRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPI 135 (213)
T ss_dssp ----CGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHG
T ss_pred ----eeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccc
Confidence 236899999999998776544 222 12222332 45666655443
No 67
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.17 E-value=0.0091 Score=56.44 Aligned_cols=108 Identities=22% Similarity=0.361 Sum_probs=72.8
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhh-ccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhh
Q 020142 77 PHEKPLTLWLNGGPGCSSVGGGAFT-ELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDAST 155 (330)
Q Consensus 77 ~~~~PlvlWlnGGPG~SS~~~g~~~-E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~ 155 (330)
...-|+++.++|| |.|.+.++.|. |+ + .-. ..-+|-+|- -|.|-|...+..+ .+-+..
T Consensus 71 ~t~gpil~l~HG~-G~S~LSfA~~a~el-----~---------s~~---~~r~~a~Dl-RgHGeTk~~~e~d--lS~eT~ 129 (343)
T KOG2564|consen 71 ATEGPILLLLHGG-GSSALSFAIFASEL-----K---------SKI---RCRCLALDL-RGHGETKVENEDD--LSLETM 129 (343)
T ss_pred CCCccEEEEeecC-cccchhHHHHHHHH-----H---------hhc---ceeEEEeec-cccCccccCChhh--cCHHHH
Confidence 3456999999988 88877555542 21 1 000 111366885 4999988777665 467788
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecC
Q 020142 156 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGN 218 (330)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~ign 218 (330)
++|+...++++|..-| .+++|+|||.||..+.+.|..=. --+|-|+++.+
T Consensus 130 ~KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k~---------lpsl~Gl~viD 179 (343)
T KOG2564|consen 130 SKDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASKT---------LPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhhh---------chhhhceEEEE
Confidence 9999999999885433 36999999999988765553211 12477877754
No 68
>PRK10162 acetyl esterase; Provisional
Probab=95.95 E-value=0.029 Score=53.85 Aligned_cols=63 Identities=16% Similarity=0.103 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 157 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
.+.+.++.+.-+++ .....++.|+|+|.||+.+..++..+.+... ....++++++..|+++..
T Consensus 136 ~~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~~ 198 (318)
T PRK10162 136 VAVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGLR 198 (318)
T ss_pred HHHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCCC
Confidence 33444444333332 1234579999999999999988877755421 123578899998988753
No 69
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.94 E-value=0.037 Score=49.48 Aligned_cols=103 Identities=15% Similarity=0.093 Sum_probs=66.9
Q ss_pred CEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHHH
Q 020142 81 PLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMH 160 (330)
Q Consensus 81 PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~ 160 (330)
+.|+++.+|=|.++....+...+++ . ..++..|+.| |-+ .......+.++.|+++.
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~-------------~-----~~~v~~i~~~-~~~-----~~~~~~~si~~la~~y~ 56 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPD-------------D-----VIGVYGIEYP-GRG-----DDEPPPDSIEELASRYA 56 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTT-------------T-----EEEEEEECST-TSC-----TTSHEESSHHHHHHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCC-------------C-----eEEEEEEecC-CCC-----CCCCCCCCHHHHHHHHH
Confidence 3578899887866653222211111 0 3567788877 554 11112356677777777
Q ss_pred HHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 161 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 161 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
+.|+. ..| ..|++|+|+|+||..+=.+|++|.++. ...+.+++.++.
T Consensus 57 ~~I~~---~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~~ 103 (229)
T PF00975_consen 57 EAIRA---RQP---EGPYVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDSP 103 (229)
T ss_dssp HHHHH---HTS---SSSEEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESCS
T ss_pred HHhhh---hCC---CCCeeehccCccHHHHHHHHHHHHHhh-------hccCceEEecCC
Confidence 66653 444 238999999999999999999998763 357788888864
No 70
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=95.84 E-value=0.055 Score=49.65 Aligned_cols=131 Identities=20% Similarity=0.309 Sum_probs=80.6
Q ss_pred EEEeeCCCCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCC
Q 020142 55 YVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESP 134 (330)
Q Consensus 55 yl~v~~~~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqP 134 (330)
-+++...+.-.+-=|.+.++ ..+|++|+|+|--|-= |.+.- ..+ .. =-+-..||+-+|-.
T Consensus 56 ~i~l~T~D~vtL~a~~~~~E---~S~pTlLyfh~NAGNm----Ghr~~------i~~---~f----y~~l~mnv~ivsYR 115 (300)
T KOG4391|consen 56 RIELRTRDKVTLDAYLMLSE---SSRPTLLYFHANAGNM----GHRLP------IAR---VF----YVNLKMNVLIVSYR 115 (300)
T ss_pred EEEEEcCcceeEeeeeeccc---CCCceEEEEccCCCcc----cchhh------HHH---HH----HHHcCceEEEEEee
Confidence 34444333345654444443 2789999999875532 22211 000 00 01234688889955
Q ss_pred CCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEE
Q 020142 135 AGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGV 214 (330)
Q Consensus 135 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi 214 (330)
|.|.|.+..... +..-+|+... .++-.+|...+.+++++|.|-||.-+-.+|.+-.+ .+.++
T Consensus 116 -GYG~S~GspsE~---GL~lDs~avl----dyl~t~~~~dktkivlfGrSlGGAvai~lask~~~----------ri~~~ 177 (300)
T KOG4391|consen 116 -GYGKSEGSPSEE---GLKLDSEAVL----DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD----------RISAI 177 (300)
T ss_pred -ccccCCCCcccc---ceeccHHHHH----HHHhcCccCCcceEEEEecccCCeeEEEeeccchh----------heeee
Confidence 999998754332 2222233222 34456889999999999999999988887765433 47899
Q ss_pred EecCCCCCc
Q 020142 215 AIGNPLLRL 223 (330)
Q Consensus 215 ~igng~~d~ 223 (330)
++-|-+++-
T Consensus 178 ivENTF~SI 186 (300)
T KOG4391|consen 178 IVENTFLSI 186 (300)
T ss_pred eeechhccc
Confidence 999988765
No 71
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.73 E-value=0.033 Score=57.52 Aligned_cols=130 Identities=15% Similarity=0.102 Sum_probs=76.6
Q ss_pred CCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccc-cccccceecCCCCcCcc
Q 020142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWN-KASNLLFVESPAGVGWS 140 (330)
Q Consensus 62 ~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~-~~anllfiDqPvGtGfS 140 (330)
.|.+|+...+... +....|+||.++|-...+....+. + . ....-|. +-..++-+|.+ |.|.|
T Consensus 5 DG~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~~~~~--~------------~-~~~~~l~~~Gy~vv~~D~R-G~g~S 67 (550)
T TIGR00976 5 DGTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGLRWGL--D------------K-TEPAWFVAQGYAVVIQDTR-GRGAS 67 (550)
T ss_pred CCCEEEEEEEecC-CCCCCCEEEEecCCCCchhhcccc--c------------c-ccHHHHHhCCcEEEEEecc-ccccC
Confidence 3557776655433 234689999999754322210000 0 0 0011122 24678899976 99999
Q ss_pred cccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 141 YSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 141 y~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
-+... ..+ ...++|+.++++ |+.+.|.- ..++.++|+||||..+-.+|.. . .-.||+++...+.
T Consensus 68 ~g~~~---~~~-~~~~~D~~~~i~-~l~~q~~~-~~~v~~~G~S~GG~~a~~~a~~---~-------~~~l~aiv~~~~~ 131 (550)
T TIGR00976 68 EGEFD---LLG-SDEAADGYDLVD-WIAKQPWC-DGNVGMLGVSYLAVTQLLAAVL---Q-------PPALRAIAPQEGV 131 (550)
T ss_pred CCceE---ecC-cccchHHHHHHH-HHHhCCCC-CCcEEEEEeChHHHHHHHHhcc---C-------CCceeEEeecCcc
Confidence 65321 112 345677776665 67676533 4589999999999765444421 1 1258899988887
Q ss_pred CCcc
Q 020142 221 LRLD 224 (330)
Q Consensus 221 ~d~~ 224 (330)
.|..
T Consensus 132 ~d~~ 135 (550)
T TIGR00976 132 WDLY 135 (550)
T ss_pred cchh
Confidence 6643
No 72
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.71 E-value=0.17 Score=48.23 Aligned_cols=110 Identities=16% Similarity=0.316 Sum_probs=60.5
Q ss_pred CeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccc-----cceecC----
Q 020142 63 GRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASN-----LLFVES---- 133 (330)
Q Consensus 63 ~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~an-----llfiDq---- 133 (330)
+...-||++.-...++..||||.|+|+=|..+-. . +-..|++.|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~---~-----------------~~sg~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQ---L-----------------HGTGWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHh---h-----------------cccchhhhhcccCcEEECcCccccc
Confidence 4566788887766777789999999987755431 1 2224444432 333331
Q ss_pred --CCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHH
Q 020142 134 --PAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 196 (330)
Q Consensus 134 --PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~ 196 (330)
|-+.|=++...+.. .+. .++..+.+.+..-..+| .-....+||+|-|-||..+-.++..
T Consensus 104 wn~~~~~~~~~p~~~~--~g~-ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~ 164 (312)
T COG3509 104 WNANGCGNWFGPADRR--RGV-DDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACE 164 (312)
T ss_pred cCCCcccccCCccccc--CCc-cHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhc
Confidence 23444443222111 111 22223333333333333 3334579999999999987777654
No 73
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.39 E-value=0.051 Score=54.85 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=50.4
Q ss_pred ccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccC
Q 020142 125 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 204 (330)
Q Consensus 125 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~ 204 (330)
..|++-+|-| |-|-|.-.. . ..+...+|+++.++|+...+.. .+.-.+++|+|+|.|||.+-.+|.+..
T Consensus 73 d~nVI~VDw~-g~g~s~y~~-a--~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p------ 141 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPT-S--AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTK------ 141 (442)
T ss_pred CCEEEEEECC-CcCCCCCcc-c--cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCC------
Confidence 4799999987 444331111 1 1233566777777776443332 344568999999999998877765321
Q ss_pred CCceeeeeEEEecCCC
Q 020142 205 KGFKFNIKGVAIGNPL 220 (330)
Q Consensus 205 ~~~~inLkGi~igng~ 220 (330)
-.+..|++.+|.
T Consensus 142 ----~rV~rItgLDPA 153 (442)
T TIGR03230 142 ----HKVNRITGLDPA 153 (442)
T ss_pred ----cceeEEEEEcCC
Confidence 136677776663
No 74
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=95.27 E-value=0.15 Score=49.32 Aligned_cols=135 Identities=10% Similarity=0.068 Sum_probs=68.3
Q ss_pred CCeeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhcc-CCceecCCCCCcc-ccCCccccccccceecCCCC--c
Q 020142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTEL-GPFYPRGDGRGLR-RNSMSWNKASNLLFVESPAG--V 137 (330)
Q Consensus 62 ~~~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~-GP~~~~~~~~~~~-~n~~sW~~~anllfiDqPvG--t 137 (330)
.+.+++|.-+... +...+|.|+.++|=.|.+-.. . ..+. .|=... .+. ....--.+...|+-+|.| | .
T Consensus 14 ~~~~~~y~~~g~~-~~~~~~~vll~Hg~~~~~~~~-~-~~~~~~~~~w~----~~~~~~~~l~~~~~~vi~~D~~-G~~~ 85 (351)
T TIGR01392 14 SDVRVAYETYGTL-NAERSNAVLVCHALTGDAHVA-G-YHDDGDPGWWD----DLIGPGRAIDTDRYFVVCSNVL-GGCY 85 (351)
T ss_pred CCceEEEEecccc-CCCCCCEEEEcCCcCcchhhc-c-cCCCCCCCchh----hccCCCCCcCCCceEEEEecCC-CCCC
Confidence 3457887654321 123458899999887755320 0 0000 000000 000 000001244689999988 7 4
Q ss_pred CcccccCC--CC--C-----CCCchhhHHHHHHHHHHHHHHCCCCCCCC-eEEEcccccccchHHHHHHHHHhcccCCCc
Q 020142 138 GWSYSNTT--SD--Y-----NCGDASTARDMHVFMMNWYEKFPEFKSRE-LFLTGESYAGHYIPQLADVLLDHNAHSKGF 207 (330)
Q Consensus 138 GfSy~~~~--~~--~-----~~~~~~~a~d~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvp~la~~i~~~n~~~~~~ 207 (330)
|-|-..+. .. + ..+.+..++++..+++ .. .-.+ ++|+|+|+||..+-.+|..-.+
T Consensus 86 g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l---~~~~~~~l~G~S~Gg~ia~~~a~~~p~-------- 150 (351)
T TIGR01392 86 GSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLD----HL---GIEQIAAVVGGSMGGMQALEWAIDYPE-------- 150 (351)
T ss_pred CCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHH----Hc---CCCCceEEEEECHHHHHHHHHHHHChH--------
Confidence 54421110 00 1 1233444455544444 32 2345 9999999999887777755222
Q ss_pred eeeeeEEEecCCCC
Q 020142 208 KFNIKGVAIGNPLL 221 (330)
Q Consensus 208 ~inLkGi~igng~~ 221 (330)
.++++++.++..
T Consensus 151 --~v~~lvl~~~~~ 162 (351)
T TIGR01392 151 --RVRAIVVLATSA 162 (351)
T ss_pred --hhheEEEEccCC
Confidence 377888877643
No 75
>PLN00021 chlorophyllase
Probab=95.25 E-value=0.081 Score=50.97 Aligned_cols=115 Identities=13% Similarity=0.051 Sum_probs=62.9
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhH
Q 020142 77 PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTA 156 (330)
Q Consensus 77 ~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a 156 (330)
..+.|+|++++|+.+.+..+ ..+.+. + .+| -..++.+|.+ | ++... . ..+-+.+
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y-~~l~~~-----------L----as~--G~~VvapD~~-g--~~~~~---~--~~~i~d~ 102 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFY-SQLLQH-----------I----ASH--GFIVVAPQLY-T--LAGPD---G--TDEIKDA 102 (313)
T ss_pred CCCCCEEEEECCCCCCcccH-HHHHHH-----------H----HhC--CCEEEEecCC-C--cCCCC---c--hhhHHHH
Confidence 45679999999997765542 221110 0 011 1345566654 2 22111 0 1122334
Q ss_pred HHHHHHHHHHHHH-C---CCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCC
Q 020142 157 RDMHVFMMNWYEK-F---PEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 157 ~d~~~fL~~f~~~-f---p~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 222 (330)
.++..++.+-++. - .+...++++|+|||.||..+-.+|....+.. ....+++++..+++..
T Consensus 103 ~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv~g 167 (313)
T PLN00021 103 AAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPVDG 167 (313)
T ss_pred HHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeeccccc
Confidence 5555555553332 1 1233357999999999998877775543321 1245788888777643
No 76
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=95.23 E-value=0.14 Score=48.14 Aligned_cols=118 Identities=20% Similarity=0.231 Sum_probs=72.0
Q ss_pred CCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCC-----CCCCCCchh
Q 020142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTT-----SDYNCGDAS 154 (330)
Q Consensus 80 ~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~-----~~~~~~~~~ 154 (330)
+++++|+-|-||....+ --|.+ .+..+- +....++=+.. .|+|..... +.-..+.++
T Consensus 2 ~~li~~IPGNPGlv~fY-~~Fl~-----------~L~~~l---~~~~~i~~ish---~Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFY-EEFLS-----------ALYEKL---NPQFEILGISH---AGHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHHH-HHHHH-----------HHHHhC---CCCCeeEEecC---CCCcCCcccccccCCCCccCHHH
Confidence 68999999999998874 33321 011110 23344444443 355554433 122456777
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCc
Q 020142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~ 223 (330)
+.+.-.+|++++....+ ..+.+++|.|||-|+.. +.+++++.. ....+++++++.=|.+.-
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi----~levl~r~~---~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYI----ALEVLKRLP---DLKFRVKKVILLFPTIED 124 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHH----HHHHHHhcc---ccCCceeEEEEeCCcccc
Confidence 88888899999887654 23568999999999654 555555433 113566677766555443
No 77
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.05 E-value=0.013 Score=58.26 Aligned_cols=80 Identities=20% Similarity=0.253 Sum_probs=52.3
Q ss_pred cccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCC
Q 020142 126 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 205 (330)
Q Consensus 126 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~ 205 (330)
-+||=||-| |||+|.... .. ++.+.+++.+..|+..-|+.....+-++|-|.||.|++.+|.. +.
T Consensus 219 iA~LtvDmP-G~G~s~~~~---l~----~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~l--e~----- 283 (411)
T PF06500_consen 219 IAMLTVDMP-GQGESPKWP---LT----QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAAL--ED----- 283 (411)
T ss_dssp -EEEEE--T-TSGGGTTT----S-----S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHH--TT-----
T ss_pred CEEEEEccC-CCcccccCC---CC----cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHh--cc-----
Confidence 468999999 999984321 11 2223466677778888999988899999999999999998843 11
Q ss_pred CceeeeeEEEecCCCCCc
Q 020142 206 GFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 206 ~~~inLkGi~igng~~d~ 223 (330)
-.|||++.-.|.++.
T Consensus 284 ---~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 284 ---PRLKAVVALGAPVHH 298 (411)
T ss_dssp ---TT-SEEEEES---SC
T ss_pred ---cceeeEeeeCchHhh
Confidence 137887766665544
No 78
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=94.78 E-value=0.24 Score=49.39 Aligned_cols=110 Identities=23% Similarity=0.295 Sum_probs=72.0
Q ss_pred CCCCCEEEEEcCCCChhhhh-----hhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCC
Q 020142 77 PHEKPLTLWLNGGPGCSSVG-----GGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCG 151 (330)
Q Consensus 77 ~~~~PlvlWlnGGPG~SS~~-----~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~ 151 (330)
..++|+++.+.|=.|.|.-. .....+.| ++. +-.. +-|.|-|--.+..-++..
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~--------------------VVfN-~RG~~g~~LtTpr~f~ag 179 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV--------------------VVFN-HRGLGGSKLTTPRLFTAG 179 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE--------------------EEEC-CCCCCCCccCCCceeecC
Confidence 46789999999999988542 22233444 332 2222 568888876666555555
Q ss_pred chhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 152 DASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 152 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
..++-+.+.++++ ++|| ..++|.+|.|+||.. +..++-|..++ . -=..|++|-|||-
T Consensus 180 ~t~Dl~~~v~~i~---~~~P---~a~l~avG~S~Gg~i---L~nYLGE~g~~---~-~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 180 WTEDLREVVNHIK---KRYP---QAPLFAVGFSMGGNI---LTNYLGEEGDN---T-PLIAAVAVCNPWD 236 (409)
T ss_pred CHHHHHHHHHHHH---HhCC---CCceEEEEecchHHH---HHHHhhhccCC---C-CceeEEEEeccch
Confidence 5555555555555 5777 568999999999984 56666655432 1 2367889999984
No 79
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.66 E-value=0.16 Score=49.22 Aligned_cols=96 Identities=23% Similarity=0.300 Sum_probs=56.3
Q ss_pred CCCCEEEEEcC-CCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhH
Q 020142 78 HEKPLTLWLNG-GPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTA 156 (330)
Q Consensus 78 ~~~PlvlWlnG-GPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a 156 (330)
.++|-|+.++| |-++.+- .++= .+.++....-++-||-| |-|+|-..+. +..-++
T Consensus 56 ~~~~pvlllHGF~~~~~~w-----~~~~-------------~~L~~~~~~~v~aiDl~-G~g~~s~~~~-----~~~y~~ 111 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSW-----RRVV-------------PLLSKAKGLRVLAIDLP-GHGYSSPLPR-----GPLYTL 111 (326)
T ss_pred CCCCcEEEeccccCCcccH-----hhhc-------------cccccccceEEEEEecC-CCCcCCCCCC-----CCceeh
Confidence 57788899998 3332222 1111 12223223447789988 7664322221 222344
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHh
Q 020142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (330)
Q Consensus 157 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (330)
.+...-++.|+.. +...+++|.|+||||..+=.+|....+.
T Consensus 112 ~~~v~~i~~~~~~---~~~~~~~lvghS~Gg~va~~~Aa~~P~~ 152 (326)
T KOG1454|consen 112 RELVELIRRFVKE---VFVEPVSLVGHSLGGIVALKAAAYYPET 152 (326)
T ss_pred hHHHHHHHHHHHh---hcCcceEEEEeCcHHHHHHHHHHhCccc
Confidence 5555566665553 3356799999999999988888775543
No 80
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=94.43 E-value=0.27 Score=46.61 Aligned_cols=52 Identities=21% Similarity=0.221 Sum_probs=40.4
Q ss_pred CCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccccchhHHH
Q 020142 175 SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYE 232 (330)
Q Consensus 175 ~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~~~~~~~~ 232 (330)
.+++.++|+|-||+.+..++....+.. ...+++.++..|++|......++..
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~~~~~~~~ 202 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTSSAASLPG 202 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcccccchhh
Confidence 567999999999999999998887652 2457889999999998863333433
No 81
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=94.42 E-value=0.2 Score=45.97 Aligned_cols=50 Identities=18% Similarity=0.202 Sum_probs=33.4
Q ss_pred HHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 162 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 162 fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
.|.+.+.....-..+++|++|.|-||.....++....+ -+.++++..|..
T Consensus 83 ~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd----------~faa~a~~sG~~ 132 (220)
T PF10503_consen 83 ALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPD----------LFAAVAVVSGVP 132 (220)
T ss_pred HHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCc----------cceEEEeecccc
Confidence 33343444445566789999999999888777765433 266777777653
No 82
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=94.12 E-value=0.1 Score=42.62 Aligned_cols=93 Identities=22% Similarity=0.307 Sum_probs=56.2
Q ss_pred EEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcccc-ccccceecCCCCcCcccccCCCCCCCCchhhHHHHH
Q 020142 82 LTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNK-ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMH 160 (330)
Q Consensus 82 lvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~-~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~ 160 (330)
+||+++|+.|.+.. +..+.+ .+.+ -.+++.+|.| +.|-+.. ...+++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~------------------~l~~~G~~v~~~~~~-~~~~~~~----------~~~~~~~~ 50 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAE------------------ALAEQGYAVVAFDYP-GHGDSDG----------ADAVERVL 50 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHH------------------HHHHTTEEEEEESCT-TSTTSHH----------SHHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHH------------------HHHHCCCEEEEEecC-CCCccch----------hHHHHHHH
Confidence 58999999876554 233222 1122 2467777877 6665511 12333333
Q ss_pred HHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 161 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 161 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
+.+. +..+ ..++++|+|+|.||..+..++.+ + -.+++++.-+|+
T Consensus 51 ~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~----~-------~~v~~~v~~~~~ 94 (145)
T PF12695_consen 51 ADIR---AGYP--DPDRIILIGHSMGGAIAANLAAR----N-------PRVKAVVLLSPY 94 (145)
T ss_dssp HHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHH----S-------TTESEEEEESES
T ss_pred HHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhh----c-------cceeEEEEecCc
Confidence 3332 3333 45689999999999987776652 1 247888888884
No 83
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=93.88 E-value=0.19 Score=50.19 Aligned_cols=98 Identities=13% Similarity=0.103 Sum_probs=59.9
Q ss_pred ccccceecCCCCcCcccccCC----CCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHh
Q 020142 125 ASNLLFVESPAGVGWSYSNTT----SDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (330)
Q Consensus 125 ~anllfiDqPvGtGfSy~~~~----~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (330)
.|-|+++|.. =-|-|..... +--.-+.+|+-+|+..|++.+-.++....+.|+.++|-||||..+.-+-.+-.
T Consensus 59 ~a~~v~lEHR-yYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP-- 135 (434)
T PF05577_consen 59 GALVVALEHR-YYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP-- 135 (434)
T ss_dssp TEEEEEE--T-TSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T--
T ss_pred CCcEEEeehh-hhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC--
Confidence 4567778754 5666654221 11135678999999999999887887667779999999999976544332221
Q ss_pred cccCCCceeeeeEEEecCCCCCccccchhHHHH
Q 020142 201 NAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEF 233 (330)
Q Consensus 201 n~~~~~~~inLkGi~igng~~d~~~~~~~~~~~ 233 (330)
.+ +.|.+--++-+....++..|.+.
T Consensus 136 -------~~-~~ga~ASSapv~a~~df~~y~~~ 160 (434)
T PF05577_consen 136 -------HL-FDGAWASSAPVQAKVDFWEYFEV 160 (434)
T ss_dssp -------TT--SEEEEET--CCHCCTTTHHHHH
T ss_pred -------Ce-eEEEEeccceeeeecccHHHHHH
Confidence 22 56777777778777777666553
No 84
>PRK11460 putative hydrolase; Provisional
Probab=93.67 E-value=0.4 Score=43.80 Aligned_cols=36 Identities=11% Similarity=0.082 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHH
Q 020142 159 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 195 (330)
Q Consensus 159 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (330)
+.++++...++ .....++++|+|.|.||..+-.++.
T Consensus 87 l~~~i~~~~~~-~~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 87 FIETVRYWQQQ-SGVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHHHh-cCCChhhEEEEEECHHHHHHHHHHH
Confidence 33444433333 2344567999999999998766553
No 85
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=93.21 E-value=0.32 Score=49.16 Aligned_cols=38 Identities=18% Similarity=0.163 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHH
Q 020142 156 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLA 194 (330)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la 194 (330)
....++++++-...|. -..+++.|+|||.||+-+-.++
T Consensus 157 ~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 157 QRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 3444566666666664 3455799999999998654443
No 86
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=92.96 E-value=0.17 Score=45.37 Aligned_cols=72 Identities=17% Similarity=0.096 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccccchh------
Q 020142 156 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPA------ 229 (330)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~~~~~------ 229 (330)
++.+.+++....+.. ...++++|.|-|-||..+-.++..- .-.+.|++.-+|++-...+...
T Consensus 87 ~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~----------p~~~~gvv~lsG~~~~~~~~~~~~~~~~ 154 (216)
T PF02230_consen 87 AERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRY----------PEPLAGVVALSGYLPPESELEDRPEALA 154 (216)
T ss_dssp HHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCT----------SSTSSEEEEES---TTGCCCHCCHCCCC
T ss_pred HHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHc----------CcCcCEEEEeeccccccccccccccccC
Confidence 344445555544332 5566899999999998766665321 1258899999998755433221
Q ss_pred HHHHhhhcCC
Q 020142 230 IYEFFWSHGM 239 (330)
Q Consensus 230 ~~~~~~~~gl 239 (330)
-.+.++.||-
T Consensus 155 ~~pi~~~hG~ 164 (216)
T PF02230_consen 155 KTPILIIHGD 164 (216)
T ss_dssp TS-EEEEEET
T ss_pred CCcEEEEecC
Confidence 2345566664
No 87
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=92.76 E-value=0.19 Score=44.24 Aligned_cols=89 Identities=19% Similarity=0.106 Sum_probs=54.3
Q ss_pred hhHHHHHHHHHHHHHHC---CCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCc-cccchh
Q 020142 154 STARDMHVFMMNWYEKF---PEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL-DQDVPA 229 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~f---p~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~-~~~~~~ 229 (330)
+..+|..++++- +.++ -.+...+++|+|+|-||+.+-.++..+.+... ..++++++..|++|. .....+
T Consensus 47 ~~~~D~~~a~~~-l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~------~~~~~~~~~~p~~d~~~~~~~~ 119 (211)
T PF07859_consen 47 AALEDVKAAYRW-LLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGL------PKPKGIILISPWTDLQDFDGPS 119 (211)
T ss_dssp HHHHHHHHHHHH-HHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTT------CHESEEEEESCHSSTSTSSCHH
T ss_pred ccccccccceee-eccccccccccccceEEeecccccchhhhhhhhhhhhcc------cchhhhhcccccccchhccccc
Confidence 344555554432 2222 13456689999999999999999988776531 348999999999887 333344
Q ss_pred HH--HHhhhcCCCChHHHHHHH
Q 020142 230 IY--EFFWSHGMISDEIGLTIM 249 (330)
Q Consensus 230 ~~--~~~~~~gli~~~~~~~~~ 249 (330)
+. .-.....+++....+.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~ 141 (211)
T PF07859_consen 120 YDDSNENKDDPFLPAPKIDWFW 141 (211)
T ss_dssp HHHHHHHSTTSSSBHHHHHHHH
T ss_pred cccccccccccccccccccccc
Confidence 32 111222345555544433
No 88
>PLN02454 triacylglycerol lipase
Probab=92.61 E-value=0.36 Score=48.23 Aligned_cols=68 Identities=16% Similarity=0.273 Sum_probs=51.5
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCc
Q 020142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~ 223 (330)
..+.+++...+++..+++|+.+. .++++|||.||-.+-..|..|.+.... ...+++..+..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 35677888999999999987643 599999999999988888888765321 123567778888876643
No 89
>PRK11071 esterase YqiA; Provisional
Probab=92.38 E-value=0.21 Score=44.29 Aligned_cols=48 Identities=21% Similarity=0.310 Sum_probs=31.2
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCc
Q 020142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~ 223 (330)
.+++.++.+.. ..++++|+|+|.||.++-.+|.+.. .+ +++.||..+|
T Consensus 48 ~~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~~------------~~-~vl~~~~~~~ 95 (190)
T PRK11071 48 AELLESLVLEH---GGDPLGLVGSSLGGYYATWLSQCFM------------LP-AVVVNPAVRP 95 (190)
T ss_pred HHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHHcC------------CC-EEEECCCCCH
Confidence 34445555443 3457999999999998887775421 12 3566776665
No 90
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=91.82 E-value=0.27 Score=53.04 Aligned_cols=152 Identities=19% Similarity=0.142 Sum_probs=80.9
Q ss_pred eEEEEEEEcc--CCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcccc-ccccceecCCCCcCccc
Q 020142 65 SLFYYFVEAE--VEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNK-ASNLLFVESPAGVGWSY 141 (330)
Q Consensus 65 ~lFy~~~es~--~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~-~anllfiDqPvGtGfSy 141 (330)
...+++.-.. .+.+.-|++++..|||+.-+.. +.+ + +..|.+.+.+ -+=++.|| +.|+|+.=
T Consensus 509 ~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~-~~~------~-------~~~~~~~~s~~g~~v~~vd-~RGs~~~G 573 (755)
T KOG2100|consen 509 TANAILILPPNFDPSKKYPLLVVVYGGPGSQSVT-SKF------S-------VDWNEVVVSSRGFAVLQVD-GRGSGGYG 573 (755)
T ss_pred EEEEEEecCCCCCCCCCCCEEEEecCCCCcceee-eeE------E-------ecHHHHhhccCCeEEEEEc-CCCcCCcc
Confidence 4555555333 2334669999999999933321 111 1 2223333333 23477788 66887652
Q ss_pred ccC-CCCC-CCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCC
Q 020142 142 SNT-TSDY-NCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (330)
Q Consensus 142 ~~~-~~~~-~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 219 (330)
..- ...+ ..++ ...+|.....+.+.+.+ ..-..++.|+|.||||-. +..+++... .--+|--+-.+|
T Consensus 574 ~~~~~~~~~~lG~-~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~----t~~~l~~~~-----~~~fkcgvavaP 642 (755)
T KOG2100|consen 574 WDFRSALPRNLGD-VEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYL----TLKLLESDP-----GDVFKCGVAVAP 642 (755)
T ss_pred hhHHHHhhhhcCC-cchHHHHHHHHHHHhcc-cccHHHeEEeccChHHHH----HHHHhhhCc-----CceEEEEEEecc
Confidence 211 0111 1222 23466666666666665 444556999999999964 334444321 123555577788
Q ss_pred CCCccccchhHHHHhhhcCCCChHH
Q 020142 220 LLRLDQDVPAIYEFFWSHGMISDEI 244 (330)
Q Consensus 220 ~~d~~~~~~~~~~~~~~~gli~~~~ 244 (330)
.+|...-...+.+-. +|+-+++.
T Consensus 643 Vtd~~~yds~~tery--mg~p~~~~ 665 (755)
T KOG2100|consen 643 VTDWLYYDSTYTERY--MGLPSEND 665 (755)
T ss_pred eeeeeeecccccHhh--cCCCcccc
Confidence 888763222232222 56655544
No 91
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=91.52 E-value=0.45 Score=39.20 Aligned_cols=62 Identities=24% Similarity=0.322 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
...+.+.+.|++..+++| ..++.|+|||-||-.+..+|..+.++... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCccc
Confidence 445567778888888888 35799999999999999999998876432 135678888887755
No 92
>PLN02872 triacylglycerol lipase
Probab=91.30 E-value=0.92 Score=45.19 Aligned_cols=123 Identities=15% Similarity=0.160 Sum_probs=66.4
Q ss_pred CceeEEEEEEeeCCCCeeEEEEEEEccC---CCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcccc
Q 020142 48 AFRQYAGYVDVDVKNGRSLFYYFVEAEV---EPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNK 124 (330)
Q Consensus 48 ~~~~~sGyl~v~~~~~~~lFy~~~es~~---~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~ 124 (330)
+|..+.=+++..+ |-.|-.+-+...+ .+..+|.|+.++|..++|..+ .. ++|.+- + .+-..+
T Consensus 41 gy~~e~h~v~T~D--Gy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w-~~---~~~~~s------l---a~~La~ 105 (395)
T PLN02872 41 GYSCTEHTIQTKD--GYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAW-FL---NSPEQS------L---GFILAD 105 (395)
T ss_pred CCCceEEEEECCC--CcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccce-ee---cCcccc------h---HHHHHh
Confidence 3444555555432 3334333333221 234578999999998877663 11 122100 0 000111
Q ss_pred -ccccceecCCCCcCcccccCC-----CCC-CCCchhhH-HHHHHHHHHHHHHCCCCCCCCeEEEcccccccch
Q 020142 125 -ASNLLFVESPAGVGWSYSNTT-----SDY-NCGDASTA-RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYI 190 (330)
Q Consensus 125 -~anllfiDqPvGtGfSy~~~~-----~~~-~~~~~~~a-~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 190 (330)
-.++.-.|.+ |.|+|+.... ..+ ..+-++.| .|+-++++...+.. .++++++|+|.||..+
T Consensus 106 ~GydV~l~n~R-G~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~~~ 174 (395)
T PLN02872 106 HGFDVWVGNVR-GTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTIMS 174 (395)
T ss_pred CCCCccccccc-ccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc----CCceEEEEECHHHHHH
Confidence 2356667766 8888865321 111 23444555 67777777665432 3579999999999654
No 93
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.18 E-value=0.55 Score=42.50 Aligned_cols=58 Identities=17% Similarity=0.246 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 156 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
.+++...+++..+++|. .+++++|||.||-.+-.+|..+.++.. ..+++.+..|.|-+
T Consensus 111 ~~~~~~~~~~~~~~~p~---~~i~vtGHSLGGaiA~l~a~~l~~~~~-----~~~i~~~tFg~P~v 168 (229)
T cd00519 111 YNQVLPELKSALKQYPD---YKIIVTGHSLGGALASLLALDLRLRGP-----GSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHhhCCC---ceEEEEccCHHHHHHHHHHHHHHhhCC-----CCceEEEEeCCCCC
Confidence 34555666666777764 479999999999999888888876531 34688889898766
No 94
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.08 E-value=0.68 Score=39.14 Aligned_cols=58 Identities=16% Similarity=0.184 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
.++++...+++...++|. .+++|+|||.||..+-.+|..+.++.. .-..+-+..|.|-
T Consensus 10 ~~~~i~~~~~~~~~~~p~---~~i~v~GHSlGg~lA~l~a~~~~~~~~-----~~~~~~~~fg~p~ 67 (153)
T cd00741 10 LANLVLPLLKSALAQYPD---YKIHVTGHSLGGALAGLAGLDLRGRGL-----GRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHCCC---CeEEEEEcCHHHHHHHHHHHHHHhccC-----CCceEEEEeCCCc
Confidence 445555566666666674 479999999999999999988876531 1234455666554
No 95
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=90.88 E-value=0.39 Score=44.21 Aligned_cols=66 Identities=11% Similarity=0.143 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccc
Q 020142 156 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 225 (330)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~ 225 (330)
+.++.+||+...+.. ...+++|.+||.|+..+-.....+...... ....-.+..|++.+|.+|...
T Consensus 76 ~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 76 GPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred HHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHHH
Confidence 444444554433221 356899999999998887777776665421 011237889999999887743
No 96
>COG4099 Predicted peptidase [General function prediction only]
Probab=90.70 E-value=3.1 Score=40.12 Aligned_cols=38 Identities=13% Similarity=0.155 Sum_probs=27.3
Q ss_pred HHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHH
Q 020142 161 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 198 (330)
Q Consensus 161 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~ 198 (330)
+.+.+-+..++.-..+++|++|-|-||.-.=+++.+..
T Consensus 254 dli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfP 291 (387)
T COG4099 254 DLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFP 291 (387)
T ss_pred HHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCc
Confidence 44454556677777888999999999987665555443
No 97
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=90.28 E-value=0.73 Score=49.83 Aligned_cols=82 Identities=17% Similarity=0.256 Sum_probs=52.5
Q ss_pred ccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCC--------------CCCCCCeEEEcccccccch
Q 020142 125 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFP--------------EFKSRELFLTGESYAGHYI 190 (330)
Q Consensus 125 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp--------------~~~~~~~yi~GESYgG~yv 190 (330)
=..+|++|.+ |+|-|-+... ....+..+|..+.+. |+...+ .+.+.++-++|.||+|...
T Consensus 279 GYaVV~~D~R-Gtg~SeG~~~----~~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~ 352 (767)
T PRK05371 279 GFAVVYVSGI-GTRGSDGCPT----TGDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLP 352 (767)
T ss_pred CeEEEEEcCC-CCCCCCCcCc----cCCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHH
Confidence 4689999965 9999866421 222344556655554 666421 2334579999999999876
Q ss_pred HHHHHHHHHhcccCCCceeeeeEEEecCCCCC
Q 020142 191 PQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 191 p~la~~i~~~n~~~~~~~inLkGi~igng~~d 222 (330)
-.+|..- .-.||.|+-..|+.+
T Consensus 353 ~~aAa~~----------pp~LkAIVp~a~is~ 374 (767)
T PRK05371 353 NAVATTG----------VEGLETIIPEAAISS 374 (767)
T ss_pred HHHHhhC----------CCcceEEEeeCCCCc
Confidence 6555321 124888888777655
No 98
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=88.85 E-value=0.48 Score=44.16 Aligned_cols=83 Identities=17% Similarity=0.128 Sum_probs=55.4
Q ss_pred cccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCC
Q 020142 126 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 205 (330)
Q Consensus 126 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~ 205 (330)
..+|.+|. -|+|-|.+.-.. .....++|.++.+ +|+.+.|-- +-++-++|.||+|.....+|.. +
T Consensus 58 Y~vV~~D~-RG~g~S~G~~~~----~~~~e~~D~~d~I-~W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~~---~----- 122 (272)
T PF02129_consen 58 YAVVVQDV-RGTGGSEGEFDP----MSPNEAQDGYDTI-EWIAAQPWS-NGKVGMYGISYGGFTQWAAAAR---R----- 122 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-T----TSHHHHHHHHHHH-HHHHHCTTE-EEEEEEEEETHHHHHHHHHHTT---T-----
T ss_pred CEEEEECC-cccccCCCcccc----CChhHHHHHHHHH-HHHHhCCCC-CCeEEeeccCHHHHHHHHHHhc---C-----
Confidence 46788995 599999764322 1556677777666 588777544 4479999999999987766641 1
Q ss_pred CceeeeeEEEecCCCCCccc
Q 020142 206 GFKFNIKGVAIGNPLLRLDQ 225 (330)
Q Consensus 206 ~~~inLkGi~igng~~d~~~ 225 (330)
.-.||.|+...++.|...
T Consensus 123 --~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred --CCCceEEEecccCCcccc
Confidence 235999999888777655
No 99
>PLN02571 triacylglycerol lipase
Probab=88.80 E-value=1.5 Score=43.98 Aligned_cols=68 Identities=10% Similarity=0.084 Sum_probs=49.0
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhccc----CCCceeeeeEEEecCCCCC
Q 020142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH----SKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~----~~~~~inLkGi~igng~~d 222 (330)
.+.++++..+++..+++|.. ..+++++|||.||-.+-..|..|....-. ..+..+++..+..|.|-+-
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 45577888888888888865 33699999999999998888888753211 0112355777888877664
No 100
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=87.55 E-value=2 Score=46.53 Aligned_cols=99 Identities=12% Similarity=0.111 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCccccc---------CCCC--
Q 020142 79 EKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSN---------TTSD-- 147 (330)
Q Consensus 79 ~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~---------~~~~-- 147 (330)
..|+|+++||=.|....+..+... +.. +-..++-+|.| |.|-|... ..+.
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~------------La~------~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~ 508 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGT------------LAA------AGVATIAIDHP-LHGARSFDANASGVNATNANVLA 508 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHH------------HHh------CCcEEEEeCCC-CCCccccccccccccccccCccc
Confidence 358999999977766543111111 100 12346667766 77766221 1111
Q ss_pred C-C--------CCchhhHHHHHHHHHHHH---------HHCCCCCCCCeEEEcccccccchHHHHHH
Q 020142 148 Y-N--------CGDASTARDMHVFMMNWY---------EKFPEFKSRELFLTGESYAGHYIPQLADV 196 (330)
Q Consensus 148 ~-~--------~~~~~~a~d~~~fL~~f~---------~~fp~~~~~~~yi~GESYgG~yvp~la~~ 196 (330)
| . .+..+.+.|+.......- ..+..+...++++.|||.||.....++..
T Consensus 509 y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 509 YMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred eeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1 1 144666777765444322 12333556789999999999998887743
No 101
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=87.45 E-value=3.1 Score=46.96 Aligned_cols=102 Identities=11% Similarity=0.095 Sum_probs=63.7
Q ss_pred CCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHH
Q 020142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDM 159 (330)
Q Consensus 80 ~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 159 (330)
.|-++.++|+.|.+..+ ..+.+ .......++-+|.| |.|-+. ....+.++.|+++
T Consensus 1068 ~~~l~~lh~~~g~~~~~-~~l~~------------------~l~~~~~v~~~~~~-g~~~~~-----~~~~~l~~la~~~ 1122 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQF-SVLSR------------------YLDPQWSIYGIQSP-RPDGPM-----QTATSLDEVCEAH 1122 (1296)
T ss_pred CCCeEEecCCCCchHHH-HHHHH------------------hcCCCCcEEEEECC-CCCCCC-----CCCCCHHHHHHHH
Confidence 46688999998877663 22211 01123556678877 655331 1124566777777
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCC
Q 020142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (330)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 219 (330)
...++. ..| ..+++++|+|+||..+-.+|.++.++. ..+..+++.++
T Consensus 1123 ~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~-------~~v~~l~l~~~ 1169 (1296)
T PRK10252 1123 LATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG-------EEVAFLGLLDT 1169 (1296)
T ss_pred HHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC-------CceeEEEEecC
Confidence 766664 222 347999999999999999998886542 23455555544
No 102
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=86.92 E-value=1.1 Score=40.19 Aligned_cols=63 Identities=16% Similarity=0.262 Sum_probs=51.4
Q ss_pred CCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 150 CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 150 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
.+.+++|.|+-+.++.+.++ ++.+++.|+|-|+|.-.+|.+..++...-+. .++++++..+..
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~------~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAALRA------RVAQVVLLSPST 107 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHHHh------heeEEEEeccCC
Confidence 57789999999999988875 4577899999999999999999999876432 477888776643
No 103
>COG0400 Predicted esterase [General function prediction only]
Probab=86.72 E-value=3.6 Score=37.39 Aligned_cols=97 Identities=15% Similarity=0.066 Sum_probs=55.5
Q ss_pred CCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeE
Q 020142 134 PAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKG 213 (330)
Q Consensus 134 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkG 213 (330)
+....|+.......-..+....++.+.+||....+++. ...+++++.|-|-|+.++..+... . +-.++|
T Consensus 58 g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~---~-------~~~~~~ 126 (207)
T COG0400 58 GGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLT---L-------PGLFAG 126 (207)
T ss_pred CcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHh---C-------chhhcc
Confidence 33445554433221122334455667788888877763 445689999999998875554432 2 124778
Q ss_pred EEecCCCCCcccc---chhHHHHhhhcCCCC
Q 020142 214 VAIGNPLLRLDQD---VPAIYEFFWSHGMIS 241 (330)
Q Consensus 214 i~igng~~d~~~~---~~~~~~~~~~~gli~ 241 (330)
+++-+|..-+..+ ...-.+.+..||--|
T Consensus 127 ail~~g~~~~~~~~~~~~~~~pill~hG~~D 157 (207)
T COG0400 127 AILFSGMLPLEPELLPDLAGTPILLSHGTED 157 (207)
T ss_pred chhcCCcCCCCCccccccCCCeEEEeccCcC
Confidence 8887776544431 223445555566433
No 104
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=86.23 E-value=1.5 Score=42.92 Aligned_cols=93 Identities=22% Similarity=0.241 Sum_probs=55.6
Q ss_pred CCCCCCCEEEEEcCCCChhhhhhhhhhcc-CCceecCCCCCccccCCccc-----cccccceecCCCCcCcccccCCCCC
Q 020142 75 VEPHEKPLTLWLNGGPGCSSVGGGAFTEL-GPFYPRGDGRGLRRNSMSWN-----KASNLLFVESPAGVGWSYSNTTSDY 148 (330)
Q Consensus 75 ~~~~~~PlvlWlnGGPG~SS~~~g~~~E~-GP~~~~~~~~~~~~n~~sW~-----~~anllfiDqPvGtGfSy~~~~~~~ 148 (330)
.+++++-.+|+.+|- |.+.|. .= +....+.|. ..+|++...-| |||+|.+..
T Consensus 132 ~~a~~~RWiL~s~GN--------g~~~E~~~~---------~~~~~~~~~~~ak~~~aNvl~fNYp-GVg~S~G~~---- 189 (365)
T PF05677_consen 132 PEAKPQRWILVSNGN--------GECYENRAM---------LDYKDDWIQRFAKELGANVLVFNYP-GVGSSTGPP---- 189 (365)
T ss_pred CCCCCCcEEEEEcCC--------hHHhhhhhh---------hccccHHHHHHHHHcCCcEEEECCC-ccccCCCCC----
Confidence 356788999999975 222332 00 011122333 35799999988 999996543
Q ss_pred CCCchhhHHHHHHHHHHHHHHCCC-CCCCCeEEEcccccccchHH
Q 020142 149 NCGDASTARDMHVFMMNWYEKFPE-FKSRELFLTGESYAGHYIPQ 192 (330)
Q Consensus 149 ~~~~~~~a~d~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvp~ 192 (330)
+-++.++| ++.+.++++.+++ -+.+++.+.|+|-||-....
T Consensus 190 --s~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 190 --SRKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred --CHHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 22333333 2444455544332 35578999999999976543
No 105
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=85.65 E-value=1.4 Score=39.31 Aligned_cols=44 Identities=25% Similarity=0.381 Sum_probs=33.1
Q ss_pred CCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccccchhH
Q 020142 174 KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAI 230 (330)
Q Consensus 174 ~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~~~~~~ 230 (330)
....+.|+|-|.||.|+-.+|.+. +++. ++.||.+.|...+..+
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l~~~ 100 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELLQDY 100 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHHHHh
Confidence 344599999999999998887654 2444 7889999987665433
No 106
>PRK13604 luxD acyl transferase; Provisional
Probab=85.46 E-value=8.8 Score=37.05 Aligned_cols=124 Identities=11% Similarity=0.128 Sum_probs=66.6
Q ss_pred CCeeEEEEEEEcc-CCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcc
Q 020142 62 NGRSLFYYFVEAE-VEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWS 140 (330)
Q Consensus 62 ~~~~lFy~~~es~-~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfS 140 (330)
.|..|.=|+.... +++..+|++|..+| .|+....+--+ -.+=+.+=.++|-.|.--|.|-|
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~~~~-----------------A~~La~~G~~vLrfD~rg~~GeS 79 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASG-FARRMDHFAGL-----------------AEYLSSNGFHVIRYDSLHHVGLS 79 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHHHHH-----------------HHHHHHCCCEEEEecCCCCCCCC
Confidence 3556666666553 34566788888775 34432211111 11223344678888865456877
Q ss_pred cccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 141 YSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 141 y~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
-++- .+...+. ...|+...+ +|+++. ...++.|.|+|.||.-+...|. ..+++++++..|.
T Consensus 80 ~G~~-~~~t~s~--g~~Dl~aai-d~lk~~---~~~~I~LiG~SmGgava~~~A~------------~~~v~~lI~~sp~ 140 (307)
T PRK13604 80 SGTI-DEFTMSI--GKNSLLTVV-DWLNTR---GINNLGLIAASLSARIAYEVIN------------EIDLSFLITAVGV 140 (307)
T ss_pred CCcc-ccCcccc--cHHHHHHHH-HHHHhc---CCCceEEEEECHHHHHHHHHhc------------CCCCCEEEEcCCc
Confidence 3321 1122222 134443322 233332 2347999999999987433331 1247788888888
Q ss_pred CC
Q 020142 221 LR 222 (330)
Q Consensus 221 ~d 222 (330)
.+
T Consensus 141 ~~ 142 (307)
T PRK13604 141 VN 142 (307)
T ss_pred cc
Confidence 77
No 107
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=85.43 E-value=1.3 Score=43.97 Aligned_cols=53 Identities=11% Similarity=-0.014 Sum_probs=32.7
Q ss_pred CCchhhHHHHHHHHHHHHHHCCCCCCCCeE-EEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCC
Q 020142 150 CGDASTARDMHVFMMNWYEKFPEFKSRELF-LTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (330)
Q Consensus 150 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~y-i~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 219 (330)
.+.++.++++..+|+ . +.-+++. ++|+|+||..+-.+|.+-.+. ++++++.++
T Consensus 141 ~t~~d~~~~~~~ll~----~---lgi~~~~~vvG~SmGG~ial~~a~~~P~~----------v~~lv~ia~ 194 (389)
T PRK06765 141 VTILDFVRVQKELIK----S---LGIARLHAVMGPSMGGMQAQEWAVHYPHM----------VERMIGVIG 194 (389)
T ss_pred CcHHHHHHHHHHHHH----H---cCCCCceEEEEECHHHHHHHHHHHHChHh----------hheEEEEec
Confidence 344444555555554 3 2334565 999999999888777654432 556666554
No 108
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=85.33 E-value=6 Score=37.16 Aligned_cols=110 Identities=17% Similarity=0.262 Sum_probs=67.5
Q ss_pred CCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhh
Q 020142 76 EPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDAST 155 (330)
Q Consensus 76 ~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~ 155 (330)
.....+++|+.+|- + .++|...|+ ..+.+=.=..|++=.|- -|.|.|-+.... .+.-++
T Consensus 56 ~~~~~~~lly~hGN---a-~Dlgq~~~~-------------~~~l~~~ln~nv~~~DY-SGyG~S~G~psE---~n~y~D 114 (258)
T KOG1552|consen 56 PEAAHPTLLYSHGN---A-ADLGQMVEL-------------FKELSIFLNCNVVSYDY-SGYGRSSGKPSE---RNLYAD 114 (258)
T ss_pred ccccceEEEEcCCc---c-cchHHHHHH-------------HHHHhhcccceEEEEec-ccccccCCCccc---ccchhh
Confidence 33446999999987 2 112322220 01112222456777785 499999775543 355666
Q ss_pred HHHHHHHHHHHHHHCCCC-CCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 156 ARDMHVFMMNWYEKFPEF-KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 156 a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
.+..++.|++ ++ +..++.|+|.|-|.. | +-.+..+ -.+.|+++-+|+++-.
T Consensus 115 i~avye~Lr~------~~g~~~~Iil~G~SiGt~--~--tv~Lasr--------~~~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 115 IKAVYEWLRN------RYGSPERIILYGQSIGTV--P--TVDLASR--------YPLAAVVLHSPFTSGM 166 (258)
T ss_pred HHHHHHHHHh------hcCCCceEEEEEecCCch--h--hhhHhhc--------CCcceEEEeccchhhh
Confidence 7777888876 55 567899999999954 3 1122211 1289999999988754
No 109
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.23 E-value=3.9 Score=38.44 Aligned_cols=118 Identities=19% Similarity=0.267 Sum_probs=58.2
Q ss_pred eEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccC
Q 020142 65 SLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNT 144 (330)
Q Consensus 65 ~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~ 144 (330)
+.|-|-......-+++|+++|+-|-||-++.. +|.|=-.... +.++---|+ ++++==.+.|.-+==+-+..
T Consensus 14 si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY----~~F~~~L~~~----l~~r~~~wt-Ish~~H~~~P~sl~~~~s~~ 84 (301)
T KOG3975|consen 14 SILTLKPWVTKSGEDKPLIVWIPGNPGLLGFY----TEFARHLHLN----LIDRLPVWT-ISHAGHALMPASLREDHSHT 84 (301)
T ss_pred cceeeeeeeccCCCCceEEEEecCCCCchhHH----HHHHHHHHHh----cccccceeE-EeccccccCCcccccccccc
Confidence 44433332222337899999999999987662 3322111100 110000232 22222234442111111111
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhc
Q 020142 145 TSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHN 201 (330)
Q Consensus 145 ~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n 201 (330)
..+ -.+.+++.+.=.+|++++.- +.+++||.|||-|.. +..+|+..+
T Consensus 85 ~~e-ifsL~~QV~HKlaFik~~~P-----k~~ki~iiGHSiGaY----m~Lqil~~~ 131 (301)
T KOG3975|consen 85 NEE-IFSLQDQVDHKLAFIKEYVP-----KDRKIYIIGHSIGAY----MVLQILPSI 131 (301)
T ss_pred ccc-ccchhhHHHHHHHHHHHhCC-----CCCEEEEEecchhHH----HHHHHhhhc
Confidence 111 13444555666788887663 356899999998854 445555544
No 110
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=84.46 E-value=2.1 Score=43.31 Aligned_cols=40 Identities=10% Similarity=0.156 Sum_probs=31.1
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHH
Q 020142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 195 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (330)
++..+++.+.+++.+++.+ .+++.|+|||.||..+-.++.
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHH
Confidence 4456788888888887654 568999999999987766554
No 111
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=84.31 E-value=1.5 Score=39.94 Aligned_cols=42 Identities=14% Similarity=0.237 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHH
Q 020142 156 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 199 (330)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (330)
-.|+.+.+..|++.++ +++||+|+|||-|+..+-.|-++-.+
T Consensus 77 y~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~~~ 118 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEEIA 118 (207)
T ss_pred HHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHHhc
Confidence 4677788888888876 57899999999998877666555443
No 112
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=84.14 E-value=2.2 Score=42.62 Aligned_cols=60 Identities=18% Similarity=0.244 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHHHHHCCCCCC-CCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCc
Q 020142 154 STARDMHVFMMNWYEKFPEFKS-RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~ 223 (330)
.+|.|...+|..-.+.+|.++. .|+.+.|.|||| |...|+.+|.- -.+.||+=-++|.-|
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~aP---------~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIAP---------WLFDGVIDNSSYALP 221 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhCc---------cceeEEEecCccccc
Confidence 5688999999888888999985 789999999997 66777767642 235565555555555
No 113
>PLN02753 triacylglycerol lipase
Probab=83.88 E-value=3.4 Score=42.54 Aligned_cols=71 Identities=15% Similarity=0.144 Sum_probs=49.6
Q ss_pred chhhHHHHHHHHHHHHHHCCCC--CCCCeEEEcccccccchHHHHHHHHHhccc--CCCceeeeeEEEecCCCCC
Q 020142 152 DASTARDMHVFMMNWYEKFPEF--KSRELFLTGESYAGHYIPQLADVLLDHNAH--SKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 152 ~~~~a~d~~~fL~~f~~~fp~~--~~~~~yi~GESYgG~yvp~la~~i~~~n~~--~~~~~inLkGi~igng~~d 222 (330)
...+.+++...+++..+++|.- ....++|+|||.||-.+-..|..|.+.... .....+++.-+..|.|-+.
T Consensus 286 k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 286 KFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred hhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 3456788889999988888642 234799999999999998888888763211 1112355667777776553
No 114
>PLN02719 triacylglycerol lipase
Probab=83.84 E-value=3.5 Score=42.35 Aligned_cols=69 Identities=16% Similarity=0.193 Sum_probs=48.7
Q ss_pred hhhHHHHHHHHHHHHHHCCCCC--CCCeEEEcccccccchHHHHHHHHHhccc--CCCceeeeeEEEecCCCC
Q 020142 153 ASTARDMHVFMMNWYEKFPEFK--SRELFLTGESYAGHYIPQLADVLLDHNAH--SKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~--~~~~yi~GESYgG~yvp~la~~i~~~n~~--~~~~~inLkGi~igng~~ 221 (330)
..+.+++...+++..+++|... ...++|+|||.||-.+-..|..|.+.... .....+++.-+..|.|-+
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRV 345 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRV 345 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCc
Confidence 3456788889999888888652 34699999999999999989888764211 111234455677776655
No 115
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=81.67 E-value=2.1 Score=42.85 Aligned_cols=65 Identities=18% Similarity=0.261 Sum_probs=40.7
Q ss_pred ccccceec-------CCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchH
Q 020142 125 ASNLLFVE-------SPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIP 191 (330)
Q Consensus 125 ~anllfiD-------qPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp 191 (330)
.|-|||+| +|.|.- ||.+...--..+.+|+-+|+...|+ ++++..-=+..|+..+|-||||+.+.
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyLtseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLaA 182 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYLTSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLAA 182 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccccHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHHH
Confidence 45677777 576665 5543221112456777777765554 56555444566899999999996543
No 116
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=81.10 E-value=5.8 Score=33.80 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=46.0
Q ss_pred ccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccC
Q 020142 125 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 204 (330)
Q Consensus 125 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~ 204 (330)
...++.+|.| |.|.+-. ...+.+..++.....+.. ..+ ..++.++|+|+||..+-.+|..+.++.
T Consensus 25 ~~~v~~~~~~-g~~~~~~-----~~~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~--- 89 (212)
T smart00824 25 RRDVSALPLP-GFGPGEP-----LPASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARG--- 89 (212)
T ss_pred CccEEEecCC-CCCCCCC-----CCCCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCC---
Confidence 3567788866 6554321 112334444444444432 333 457999999999999988888877542
Q ss_pred CCceeeeeEEEecCC
Q 020142 205 KGFKFNIKGVAIGNP 219 (330)
Q Consensus 205 ~~~~inLkGi~igng 219 (330)
...+++++.+.
T Consensus 90 ----~~~~~l~~~~~ 100 (212)
T smart00824 90 ----IPPAAVVLLDT 100 (212)
T ss_pred ----CCCcEEEEEcc
Confidence 23556665544
No 117
>PLN02324 triacylglycerol lipase
Probab=80.58 E-value=6 Score=39.73 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=47.0
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhccc-----CCCceeeeeEEEecCCCC
Q 020142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH-----SKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~-----~~~~~inLkGi~igng~~ 221 (330)
..+.+++..-+++..+++|... ..+.|+|||.||-.+-..|..|.+.... .....+++.-+..|.|-+
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRV 265 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRI 265 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCc
Confidence 3556778888888888888542 3699999999999988888888764211 011234566666776655
No 118
>PLN02761 lipase class 3 family protein
Probab=78.58 E-value=7.1 Score=40.28 Aligned_cols=69 Identities=14% Similarity=0.137 Sum_probs=47.4
Q ss_pred hhhHHHHHHHHHHHHHHCCCC-C--CCCeEEEcccccccchHHHHHHHHHhccc---CCCceeeeeEEEecCCCC
Q 020142 153 ASTARDMHVFMMNWYEKFPEF-K--SRELFLTGESYAGHYIPQLADVLLDHNAH---SKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~-~--~~~~yi~GESYgG~yvp~la~~i~~~n~~---~~~~~inLkGi~igng~~ 221 (330)
..+.+++...+++..+.+|.. + ...++|+|||.||-.+-..|..|.+.+.. .....+++.-+..|.|-+
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRV 342 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRV 342 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCc
Confidence 355678888899888888542 1 22599999999999988888888754321 012245566677776654
No 119
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=78.06 E-value=8.9 Score=38.39 Aligned_cols=36 Identities=11% Similarity=0.036 Sum_probs=24.2
Q ss_pred CCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 176 RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 176 ~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
....|+|.|+||.-+-.+|..- .+ .+.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~---Pd-------~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHW---PE-------RFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhC---cc-------cccEEEEeccce
Confidence 3589999999998766555432 11 366777777754
No 120
>PHA00007 E cell lysis protein
Probab=77.99 E-value=2.8 Score=32.07 Aligned_cols=26 Identities=31% Similarity=0.425 Sum_probs=23.4
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHhh
Q 020142 1 MGRWCFGGFLNISLVVLLLLVSRSNV 26 (330)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (330)
|.+|-..++|-+++.+.|+|.|+++.
T Consensus 1 Me~WTL~~~LAFLLLLSLlLPSLLIm 26 (91)
T PHA00007 1 MEHWTLSDTLAFLLLLSLLLPSLLIM 26 (91)
T ss_pred CceeeHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999643
No 121
>KOG3101 consensus Esterase D [General function prediction only]
Probab=76.20 E-value=20 Score=33.13 Aligned_cols=143 Identities=17% Similarity=0.150 Sum_probs=67.5
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhh----------hccCCceecCCCC----CccccCCccccccccceecCCCCcCcccc
Q 020142 77 PHEKPLTLWLNGGPGCSSVGGGAF----------TELGPFYPRGDGR----GLRRNSMSWNKASNLLFVESPAGVGWSYS 142 (330)
Q Consensus 77 ~~~~PlvlWlnGGPG~SS~~~g~~----------~E~GP~~~~~~~~----~~~~n~~sW~~~anllfiDqPvGtGfSy~ 142 (330)
.+.-|+++||.|= -|.- -+| .++|--.|.+|.. .+.-.+.|| |=-.|.||=-.
T Consensus 41 ~k~~P~lf~LSGL-TCT~---~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~esw---------DFG~GAGFYvn 107 (283)
T KOG3101|consen 41 GKRCPVLFYLSGL-TCTH---ENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESW---------DFGQGAGFYVN 107 (283)
T ss_pred CCcCceEEEecCC-cccc---hhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccc---------cccCCceeEEe
Confidence 3446999999964 2321 222 2455555555532 233345566 33456776433
Q ss_pred cCCCCCCCCchhhHH--HHHHHHHHHH-H----HCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEE
Q 020142 143 NTTSDYNCGDASTAR--DMHVFMMNWY-E----KFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVA 215 (330)
Q Consensus 143 ~~~~~~~~~~~~~a~--d~~~fL~~f~-~----~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~ 215 (330)
.+. +.=++ .||+.+.+=+ + .+-.....++-|+|||+|||=+-.++.+ |. -..|.+.
T Consensus 108 At~-------epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lk----n~------~kykSvS 170 (283)
T KOG3101|consen 108 ATQ-------EPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLK----NP------SKYKSVS 170 (283)
T ss_pred ccc-------chHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEc----Cc------cccccee
Confidence 222 22222 3444443322 1 1112223358899999999964433211 11 1355666
Q ss_pred ecCCCCCccccchhHHHHhhhcCCCChHHHHHHHh
Q 020142 216 IGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMS 250 (330)
Q Consensus 216 igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~ 250 (330)
--.|..+|..---+.-.|.-+.|- ++.++++...
T Consensus 171 AFAPI~NP~~cpWGqKAf~gYLG~-~ka~W~~yDa 204 (283)
T KOG3101|consen 171 AFAPICNPINCPWGQKAFTGYLGD-NKAQWEAYDA 204 (283)
T ss_pred ccccccCcccCcchHHHhhcccCC-ChHHHhhcch
Confidence 555555554322122222222333 5556655433
No 122
>PRK14566 triosephosphate isomerase; Provisional
Probab=75.99 E-value=6.7 Score=36.93 Aligned_cols=61 Identities=21% Similarity=0.401 Sum_probs=45.4
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
.+.|+++..||++++.+.-......+=|. |||-.-|.-+..|.... ++.|+.||...+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 46688999999999975411112223332 99999999999998753 588999999988874
No 123
>PF03283 PAE: Pectinacetylesterase
Probab=74.63 E-value=28 Score=34.34 Aligned_cols=147 Identities=19% Similarity=0.132 Sum_probs=72.3
Q ss_pred EEEEEEEccCCCCCCCEEEEEcCCCChhhhh---hhhhhccCCce-----ecCCC---CCccccCCccccccccceecCC
Q 020142 66 LFYYFVEAEVEPHEKPLTLWLNGGPGCSSVG---GGAFTELGPFY-----PRGDG---RGLRRNSMSWNKASNLLFVESP 134 (330)
Q Consensus 66 lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~---~g~~~E~GP~~-----~~~~~---~~~~~n~~sW~~~anllfiDqP 134 (330)
-.|++-+.. ....+-+||.|+||=-|.+.. .-...++|-.. +..+| ..-..||.=+ ..|++||=-
T Consensus 37 ~~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~vpY- 112 (361)
T PF03283_consen 37 PGYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFVPY- 112 (361)
T ss_pred CcEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEEEe-
Confidence 334444442 345678999999998888753 01122333222 11111 1234466222 246777743
Q ss_pred CCcCcccccCCCCCC---CCchhhHHHHHHHHHHHHHHCCCCC-CCCeEEEcccccccchHHHHHHHHHhcccCCCceee
Q 020142 135 AGVGWSYSNTTSDYN---CGDASTARDMHVFMMNWYEKFPEFK-SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFN 210 (330)
Q Consensus 135 vGtGfSy~~~~~~~~---~~~~~~a~d~~~fL~~f~~~fp~~~-~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~in 210 (330)
=+|-++.-+..... .+..-....+++.+.+++... .+. ..++.|+|.|-||.-+..-+.++.+.-.. .+.
T Consensus 113 -C~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~----~~~ 186 (361)
T PF03283_consen 113 -CDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSN-GLPNAKQVLLTGCSAGGLGAILHADYVRDRLPS----SVK 186 (361)
T ss_pred -cCCccccCcccccccCCceeEeecHHHHHHHHHHHHHh-cCcccceEEEeccChHHHHHHHHHHHHHHHhcc----Cce
Confidence 34444432111110 011111233444444444332 232 34699999999998877777777665321 244
Q ss_pred eeEEEecCCCCC
Q 020142 211 IKGVAIGNPLLR 222 (330)
Q Consensus 211 LkGi~igng~~d 222 (330)
++++.=..-++|
T Consensus 187 v~~~~DsG~f~d 198 (361)
T PF03283_consen 187 VKCLSDSGFFLD 198 (361)
T ss_pred EEEecccccccc
Confidence 555544433444
No 124
>PLN02802 triacylglycerol lipase
Probab=74.56 E-value=7.6 Score=39.90 Aligned_cols=63 Identities=17% Similarity=0.142 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
.+.+++.+-++++++++|.-. ..++|+|||.||-.+-..|..|.+.... .+.+.-+..|.|-+
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRV 371 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRV 371 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCc
Confidence 455677788888888877432 3699999999999988888888764321 12455666676644
No 125
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=74.34 E-value=9.7 Score=34.97 Aligned_cols=63 Identities=14% Similarity=0.081 Sum_probs=45.1
Q ss_pred CCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 150 CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 150 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
.+.++-++.+.+.+..+.. ..+++.|+|.|-|+.-+-...+++.+..... .=+++-+.+||+.
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~---~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP---PDDLSFVLIGNPR 89 (225)
T ss_pred hHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC---cCceEEEEecCCC
Confidence 3445556667777776554 5678999999999988888888887743211 1368899999884
No 126
>PLN02408 phospholipase A1
Probab=73.93 E-value=8.9 Score=37.90 Aligned_cols=63 Identities=13% Similarity=0.104 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
...+++.+-+++..+++|.. ...++|+|||.||-.+-..|..|.+.... . ..+.-+..|.|-+
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~--~--~~V~v~tFGsPRV 241 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKR--A--PMVTVISFGGPRV 241 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCC--C--CceEEEEcCCCCc
Confidence 45567778888888888865 23599999999999988888888764211 1 1244566665544
No 127
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=73.87 E-value=7.6 Score=37.79 Aligned_cols=59 Identities=19% Similarity=0.327 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 157 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
.++.+-++.-...+|++ .++++|||-||..+...|..|...... ....++=+.-|-|-+
T Consensus 155 ~~~~~~~~~L~~~~~~~---~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNY---SIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHHhcCCc---EEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCc
Confidence 34455555555677744 799999999999999999999987542 134566666776644
No 128
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=73.84 E-value=31 Score=32.43 Aligned_cols=104 Identities=16% Similarity=0.136 Sum_probs=63.4
Q ss_pred CEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHHH
Q 020142 81 PLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMH 160 (330)
Q Consensus 81 PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~ 160 (330)
|.+|+++++=|.-.....+-.+++|- .-++-++.| |.|.- .....+.++.|+...
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-------------------~~v~~l~a~-g~~~~-----~~~~~~l~~~a~~yv 55 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-------------------LPVYGLQAP-GYGAG-----EQPFASLDDMAAAYV 55 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-------------------ceeeccccC-ccccc-----ccccCCHHHHHHHHH
Confidence 67899998777644322233344432 224456766 44321 111235566666666
Q ss_pred HHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCC
Q 020142 161 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 161 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 222 (330)
+.|+ +..|+- |.+|.|.|+||.-+=.+|.++..+.. ...-++|.+....
T Consensus 56 ~~Ir---~~QP~G---Py~L~G~S~GG~vA~evA~qL~~~G~-------~Va~L~llD~~~~ 104 (257)
T COG3319 56 AAIR---RVQPEG---PYVLLGWSLGGAVAFEVAAQLEAQGE-------EVAFLGLLDAVPP 104 (257)
T ss_pred HHHH---HhCCCC---CEEEEeeccccHHHHHHHHHHHhCCC-------eEEEEEEeccCCC
Confidence 6665 467744 89999999999999999999987642 2444555555444
No 129
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=73.81 E-value=16 Score=35.30 Aligned_cols=47 Identities=26% Similarity=0.374 Sum_probs=34.4
Q ss_pred HHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCC
Q 020142 165 NWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 165 ~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 222 (330)
.|+...|+...+.+.++|+|-||...-.+|. +.+ .++.++...|++.
T Consensus 164 d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~----------rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 164 DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDP----------RVKAAAADVPFLC 210 (320)
T ss_dssp HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSS----------T-SEEEEESESSS
T ss_pred HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCc----------cccEEEecCCCcc
Confidence 4677899998889999999999987655553 322 2677777777654
No 130
>PRK04940 hypothetical protein; Provisional
Probab=73.52 E-value=6.4 Score=35.02 Aligned_cols=42 Identities=17% Similarity=0.273 Sum_probs=31.5
Q ss_pred CCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccccchhH
Q 020142 176 RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAI 230 (330)
Q Consensus 176 ~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~~~~~~ 230 (330)
.++.|+|.|-||.|+-.+|.+- .++. +|.||.+.|...+..+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~------------g~~a-VLiNPAv~P~~~L~~~ 101 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC------------GIRQ-VIFNPNLFPEENMEGK 101 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH------------CCCE-EEECCCCChHHHHHHH
Confidence 4689999999999998888663 2333 6789999997654443
No 131
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=73.06 E-value=8.2 Score=35.42 Aligned_cols=39 Identities=21% Similarity=0.360 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHh
Q 020142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (330)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (330)
...+++++..+.+++ +++|+|||=||..+-+.|..+.+.
T Consensus 70 ~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~ 108 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDE 108 (224)
T ss_pred HHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHH
Confidence 445677777776653 599999999999988888775543
No 132
>PRK14567 triosephosphate isomerase; Provisional
Probab=72.01 E-value=10 Score=35.50 Aligned_cols=61 Identities=20% Similarity=0.333 Sum_probs=45.0
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
.+.++++..++++++.++-+-....+=|. |||-.-|.=+..|.+.. ++.|+.||.+.+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 46788999999999976421112222222 89999999999998753 588999999988765
No 133
>PLN02847 triacylglycerol lipase
Probab=71.99 E-value=7.7 Score=40.67 Aligned_cols=52 Identities=15% Similarity=0.306 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecC
Q 020142 159 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGN 218 (330)
Q Consensus 159 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~ign 218 (330)
+...|++-+..+|.| ++.|+|||.||-.+..++..+.++.. .-+++.+..|-
T Consensus 237 i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~-----fssi~CyAFgP 288 (633)
T PLN02847 237 STPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE-----FSSTTCVTFAP 288 (633)
T ss_pred HHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC-----CCCceEEEecC
Confidence 334555666778877 69999999999988877766543321 23455666664
No 134
>PLN02310 triacylglycerol lipase
Probab=71.10 E-value=12 Score=37.62 Aligned_cols=63 Identities=13% Similarity=0.072 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHHHCCCC-CCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCC
Q 020142 155 TARDMHVFMMNWYEKFPEF-KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 222 (330)
+.+++.+-+++..+.+++- ....+.|+|||.||-.+-..|..|.+.. +.+++.-+..|.|-+.
T Consensus 187 a~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 187 ASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVG 250 (405)
T ss_pred HHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCcc
Confidence 4456666677766666532 2236999999999999888787776532 1345566677766553
No 135
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=70.44 E-value=6.2 Score=36.25 Aligned_cols=72 Identities=15% Similarity=0.024 Sum_probs=48.4
Q ss_pred CcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEE
Q 020142 136 GVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVA 215 (330)
Q Consensus 136 GtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~ 215 (330)
-+||-++.. ..+.+++..++..+++--|+.+|.-+ .+-+.|||-|.|.+.....++. + -.+.|++
T Consensus 102 svgY~l~~q----~htL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r--~-------prI~gl~ 166 (270)
T KOG4627|consen 102 SVGYNLCPQ----VHTLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQR--S-------PRIWGLI 166 (270)
T ss_pred EeccCcCcc----cccHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhc--C-------chHHHHH
Confidence 456666543 24677888888888877777777443 4999999999886655554432 1 2366777
Q ss_pred ecCCCCC
Q 020142 216 IGNPLLR 222 (330)
Q Consensus 216 igng~~d 222 (330)
+-.|+-+
T Consensus 167 l~~GvY~ 173 (270)
T KOG4627|consen 167 LLCGVYD 173 (270)
T ss_pred HHhhHhh
Confidence 7777644
No 136
>PLN02934 triacylglycerol lipase
Probab=70.36 E-value=11 Score=38.71 Aligned_cols=40 Identities=15% Similarity=0.221 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHh
Q 020142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (330)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (330)
++..-++++++++|.+ +++++|||-||-.+-..|..+..+
T Consensus 306 ~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 306 AVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHHh
Confidence 4667788888888865 699999999999988877776543
No 137
>PLN00413 triacylglycerol lipase
Probab=70.29 E-value=5.4 Score=40.66 Aligned_cols=39 Identities=18% Similarity=0.340 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHH
Q 020142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 199 (330)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (330)
++...+++.++++|+. +++++|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 4567788888888854 69999999999998888776654
No 138
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=70.10 E-value=6.6 Score=35.49 Aligned_cols=50 Identities=14% Similarity=0.185 Sum_probs=35.8
Q ss_pred CchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhc
Q 020142 151 GDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHN 201 (330)
Q Consensus 151 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n 201 (330)
+.+..++.+.+.|.+..+..+.- .+++.++|||.||.++=.....+.+..
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 34556777777787777665543 458999999999999876666565543
No 139
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=68.36 E-value=21 Score=36.62 Aligned_cols=32 Identities=25% Similarity=0.225 Sum_probs=21.9
Q ss_pred HHHHHHHHHCCCCCCCCeEEEcccccccchHHH
Q 020142 161 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQL 193 (330)
Q Consensus 161 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~l 193 (330)
+..++..+.|-.= ..++-|+|||-|++-+-.+
T Consensus 166 kWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 166 KWVRDNIEAFGGD-PQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHhCCC-ccceEEeeccchHHHHHHh
Confidence 5566666666433 3359999999998765544
No 140
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=68.26 E-value=10 Score=36.46 Aligned_cols=73 Identities=11% Similarity=0.128 Sum_probs=41.2
Q ss_pred CchhhHHHHHHHHHHHHHHCCC-CCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccccch
Q 020142 151 GDASTARDMHVFMMNWYEKFPE-FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVP 228 (330)
Q Consensus 151 ~~~~~a~d~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~~~~ 228 (330)
+.+++++|+-+.++-+-..... +...++.|+|||-|.+=+-. ++...+... ..-.++|+|+-.|.-|.+....
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~---Yl~~~~~~~--~~~~VdG~ILQApVSDREa~~~ 155 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLH---YLSSPNPSP--SRPPVDGAILQAPVSDREAILN 155 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHH---HHHH-TT-----CCCEEEEEEEEE---TTSTTT
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHH---HHhccCccc--cccceEEEEEeCCCCChhHhhh
Confidence 5677788887766655444322 34567999999999885444 343333210 1356899999999888875443
No 141
>COG0627 Predicted esterase [General function prediction only]
Probab=68.01 E-value=15 Score=35.64 Aligned_cols=112 Identities=20% Similarity=0.251 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCC---ccccCCccccccccceecCCCCcCcccccCCCCCCCCchhh
Q 020142 79 EKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRG---LRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDAST 155 (330)
Q Consensus 79 ~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~---~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~ 155 (330)
++.-|+|+.+|..|..- .+.+.++.+-..+... ..++-..+....++--|+ |+|.|.|+-.+...-.....
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~-- 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG-- 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC--
Confidence 33335566667777731 2223344432222111 111122344444455555 78999887543221111111
Q ss_pred HHHHHHHHH-----HHHHHCCCCCC-CCeEEEcccccccchHHHHHH
Q 020142 156 ARDMHVFMM-----NWYEKFPEFKS-RELFLTGESYAGHYIPQLADV 196 (330)
Q Consensus 156 a~d~~~fL~-----~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~ 196 (330)
.-+++.||. .|.+.||.-+. ..-.|+|+|.||+=+-.+|.+
T Consensus 126 ~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~ 172 (316)
T COG0627 126 PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALK 172 (316)
T ss_pred ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhh
Confidence 245555554 45566774432 357999999999987776654
No 142
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=67.95 E-value=63 Score=31.03 Aligned_cols=103 Identities=17% Similarity=0.227 Sum_probs=60.4
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcccccc--ccceecCCCCcCcccccCCCCCCCCchh
Q 020142 77 PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKAS--NLLFVESPAGVGWSYSNTTSDYNCGDAS 154 (330)
Q Consensus 77 ~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~a--nllfiDqPvGtGfSy~~~~~~~~~~~~~ 154 (330)
.+...+|+=++|-||+-== +- -+- ++.+.+ -++=|.-| |-||+-..... ..+.++
T Consensus 32 gs~~gTVv~~hGsPGSH~D-Fk---Yi~----------------~~l~~~~iR~I~iN~P-Gf~~t~~~~~~--~~~n~e 88 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHND-FK---YIR----------------PPLDEAGIRFIGINYP-GFGFTPGYPDQ--QYTNEE 88 (297)
T ss_pred CCCceeEEEecCCCCCccc-hh---hhh----------------hHHHHcCeEEEEeCCC-CCCCCCCCccc--ccChHH
Confidence 3455689999999995421 10 011 122222 24456668 77766443322 233333
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
- ..|...+++.- +.+ ..+.+.|||-|+--+-.+|... .+.|+++.||.
T Consensus 89 r----~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~------------~~~g~~lin~~ 136 (297)
T PF06342_consen 89 R----QNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH------------PLHGLVLINPP 136 (297)
T ss_pred H----HHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC------------ccceEEEecCC
Confidence 3 35666666553 343 4688889999998777666443 36799998885
No 143
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=67.39 E-value=58 Score=31.89 Aligned_cols=122 Identities=23% Similarity=0.385 Sum_probs=65.6
Q ss_pred eEEEEEEEccCCCCCCCEEEEEcCCCChhhhh-h-hhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccc
Q 020142 65 SLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVG-G-GAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYS 142 (330)
Q Consensus 65 ~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~-~-g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~ 142 (330)
-.+.|.-. ......|+++-++|=-|.|... + |+..+ +... .| .++-.+ --|.|.+-.
T Consensus 62 ~~ldw~~~--p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~------------~~~r--g~----~~Vv~~-~Rgcs~~~n 120 (345)
T COG0429 62 IDLDWSED--PRAAKKPLVVLFHGLEGSSNSPYARGLMRA------------LSRR--GW----LVVVFH-FRGCSGEAN 120 (345)
T ss_pred EEEeeccC--ccccCCceEEEEeccCCCCcCHHHHHHHHH------------HHhc--CC----eEEEEe-cccccCCcc
Confidence 45555332 2334569999999977776432 1 11110 1111 13 344445 236665533
Q ss_pred cCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 143 NTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 143 ~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
....-|..+.. +|+..|+..-.+++| .+++|.+|-|.||. .+|..+.+..+. . ..-.++++-+|+
T Consensus 121 ~~p~~yh~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~d---~-~~~aa~~vs~P~ 185 (345)
T COG0429 121 TSPRLYHSGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGDD---L-PLDAAVAVSAPF 185 (345)
T ss_pred cCcceecccch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhccC---c-ccceeeeeeCHH
Confidence 23233333444 444444433333565 67999999999996 567777765432 2 235677777764
No 144
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=67.37 E-value=1.2 Score=43.36 Aligned_cols=103 Identities=17% Similarity=0.229 Sum_probs=55.4
Q ss_pred CCCCCEEEEEcCCCChh-h-hhhhhhhccCCceecCCCCCccccCCccc-cccccceecCCCCcCcccccCCCCCCCCch
Q 020142 77 PHEKPLTLWLNGGPGCS-S-VGGGAFTELGPFYPRGDGRGLRRNSMSWN-KASNLLFVESPAGVGWSYSNTTSDYNCGDA 153 (330)
Q Consensus 77 ~~~~PlvlWlnGGPG~S-S-~~~g~~~E~GP~~~~~~~~~~~~n~~sW~-~~anllfiDqPvGtGfSy~~~~~~~~~~~~ 153 (330)
..++|++|.++|=-+.. + .++-- +..+-.... .-.||+.||=-.+..-.|... ..+..
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~---------------~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a----~~n~~ 128 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQD---------------MIKALLQKDTGDYNVIVVDWSRGASNNYPQA----VANTR 128 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHH---------------HHHHHHCC--S-EEEEEEE-HHHHSS-HHHH----HHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHH---------------HHHHHHhhccCCceEEEEcchhhccccccch----hhhHH
Confidence 45789999999844433 1 11100 111111111 357999999433332222210 23345
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHH
Q 020142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 199 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (330)
.+++.+..||....... .+...+++|+|+|.|+|.+-.+++++..
T Consensus 129 ~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 129 LVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 66666767776655332 3335679999999999999888888766
No 145
>PLN02162 triacylglycerol lipase
Probab=67.10 E-value=8.2 Score=39.31 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHh
Q 020142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (330)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (330)
.+.+-|++.+.++|.+ +++++|||.||-.+-..|..+..+
T Consensus 263 ~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa~L~~~ 302 (475)
T PLN02162 263 TIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPAILAIH 302 (475)
T ss_pred HHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHHHHHHc
Confidence 4456677778888854 699999999999887777666543
No 146
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=65.45 E-value=21 Score=32.55 Aligned_cols=66 Identities=18% Similarity=0.174 Sum_probs=36.0
Q ss_pred hhHHHHHHHHHHHHHHC--CCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEE-EecCCCCCcccc
Q 020142 154 STARDMHVFMMNWYEKF--PEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGV-AIGNPLLRLDQD 226 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~f--p~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi-~igng~~d~~~~ 226 (330)
..++.+.+.++...+.+ ..-..+++.|+|||.||.- ...+....... .-++++| .+|.|...+...
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlv-ar~~l~~~~~~------~~~v~~iitl~tPh~g~~~~ 129 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLV-ARSALSLPNYD------PDSVKTIITLGTPHRGSPLA 129 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHH-HHHHHhccccc------cccEEEEEEEcCCCCCcccc
Confidence 44555555555555544 2224568999999999963 22222222111 1234454 467777666543
No 147
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=64.88 E-value=4.5 Score=37.01 Aligned_cols=90 Identities=18% Similarity=0.053 Sum_probs=56.6
Q ss_pred CEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCC---CCCCchhhHH
Q 020142 81 PLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSD---YNCGDASTAR 157 (330)
Q Consensus 81 PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~---~~~~~~~~a~ 157 (330)
--||.+-|--||+-.++ +|-..+ .++ -. ...++=+|.| |.|-|....... ...-|.+.|-
T Consensus 43 ~~iLlipGalGs~~tDf------~pql~~-------l~k--~l-~~TivawDPp-GYG~SrPP~Rkf~~~ff~~Da~~av 105 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDF------PPQLLS-------LFK--PL-QVTIVAWDPP-GYGTSRPPERKFEVQFFMKDAEYAV 105 (277)
T ss_pred ceeEecccccccccccC------CHHHHh-------cCC--CC-ceEEEEECCC-CCCCCCCCcccchHHHHHHhHHHHH
Confidence 35778889888887753 232211 111 11 2678889955 999998644221 1344566666
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHH
Q 020142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVL 197 (330)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i 197 (330)
|+.+.|+ -.+|-|.|-|=||.-+-..|.+-
T Consensus 106 dLM~aLk----------~~~fsvlGWSdGgiTalivAak~ 135 (277)
T KOG2984|consen 106 DLMEALK----------LEPFSVLGWSDGGITALIVAAKG 135 (277)
T ss_pred HHHHHhC----------CCCeeEeeecCCCeEEEEeeccC
Confidence 6666663 34799999999998766555443
No 148
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=63.16 E-value=11 Score=36.34 Aligned_cols=78 Identities=8% Similarity=-0.058 Sum_probs=42.8
Q ss_pred cccceecCCCCcCcccccCCCCCCCCchhhH-HHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccC
Q 020142 126 SNLLFVESPAGVGWSYSNTTSDYNCGDASTA-RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 204 (330)
Q Consensus 126 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a-~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~ 204 (330)
.+++-+|-. |-|.|-. . .+.++.+ .++.+++....++.+ ..+++++|+|+||..+..++.. ..
T Consensus 95 ~~V~~~D~~-g~g~s~~----~--~~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~---~~--- 158 (350)
T TIGR01836 95 QDVYLIDWG-YPDRADR----Y--LTLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAAL---YP--- 158 (350)
T ss_pred CeEEEEeCC-CCCHHHh----c--CCHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHh---Cc---
Confidence 356667743 4454421 1 1222222 234444444444443 4589999999999876554432 11
Q ss_pred CCceeeeeEEEecCCCCCc
Q 020142 205 KGFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 205 ~~~~inLkGi~igng~~d~ 223 (330)
-.++++++.++.++.
T Consensus 159 ----~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 159 ----DKIKNLVTMVTPVDF 173 (350)
T ss_pred ----hheeeEEEecccccc
Confidence 136777777776664
No 149
>PLN03037 lipase class 3 family protein; Provisional
Probab=62.16 E-value=22 Score=36.69 Aligned_cols=62 Identities=18% Similarity=0.132 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHCCCC-CCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 156 ARDMHVFMMNWYEKFPEF-KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 156 a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
.+++..-+++..+.+++. ....++|+|||.||-.+-..|..|.+.... ..++.-+..|.|-+
T Consensus 297 reQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~----~~~VtvyTFGsPRV 359 (525)
T PLN03037 297 SEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA----LSNISVISFGAPRV 359 (525)
T ss_pred HHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC----CCCeeEEEecCCCc
Confidence 356666777777777643 234699999999999988888777764321 11344455565543
No 150
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=61.03 E-value=27 Score=35.66 Aligned_cols=80 Identities=19% Similarity=0.259 Sum_probs=54.2
Q ss_pred HHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccccchhH--HHHhhh--
Q 020142 161 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAI--YEFFWS-- 236 (330)
Q Consensus 161 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~~~~~~--~~~~~~-- 236 (330)
..++.||.+-|++ -|..|-|=||+=.-..|++..+. +.||+.|.|.++........ ......
T Consensus 104 ~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~d----------fDGIlAgaPA~~~~~~~~~~~~~~~~~~~~ 169 (474)
T PF07519_consen 104 ALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPED----------FDGILAGAPAINWTHLQLAHAWPAQVMYPD 169 (474)
T ss_pred HHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChhh----------cCeEEeCCchHHHHHHHHHhhhhhhhhccC
Confidence 5677888887765 69999999999988888776653 88999999998875443221 111111
Q ss_pred -cCCCChHHHHH----HHhhCCc
Q 020142 237 -HGMISDEIGLT----IMSDCDF 254 (330)
Q Consensus 237 -~gli~~~~~~~----~~~~C~~ 254 (330)
...++....+. +.++|+.
T Consensus 170 ~~~~~~~~~~~~i~~avl~~CD~ 192 (474)
T PF07519_consen 170 PGGYLSPCKLDLIHAAVLAACDA 192 (474)
T ss_pred CCCCCCHHHHHHHHHHHHHhccc
Confidence 24566665544 4456764
No 151
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=60.02 E-value=14 Score=32.70 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=38.1
Q ss_pred cccccceecCCCC--cCcccccCCCCCCCCchhhHHHHHHHHHHHHHHC-CCCCCCCeEEEcccccccchHHHHHH
Q 020142 124 KASNLLFVESPAG--VGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKF-PEFKSRELFLTGESYAGHYIPQLADV 196 (330)
Q Consensus 124 ~~anllfiDqPvG--tGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~f-p~~~~~~~yi~GESYgG~yvp~la~~ 196 (330)
+.|-|.|++-... ...+-.. . .--+..|.+|..|+...-..+ | ...+-++|||||..-+-..++.
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~--~---~~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAAS--P---GYARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccccC--c---hHHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 6778888753333 2222110 0 012345667777777765555 3 3369999999998866555544
No 152
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=56.65 E-value=17 Score=33.93 Aligned_cols=64 Identities=20% Similarity=0.189 Sum_probs=42.1
Q ss_pred ccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHh
Q 020142 127 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (330)
Q Consensus 127 nllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (330)
.++=|+-| |-|==+.. ...++.++.|..+..-|.. -+..+|+-++|||+||..+=.+|.++.+.
T Consensus 35 el~avqlP-GR~~r~~e---p~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~ 98 (244)
T COG3208 35 ELLAVQLP-GRGDRFGE---PLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERA 98 (244)
T ss_pred heeeecCC-CcccccCC---cccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHc
Confidence 45667767 65522211 1234555666655555542 34577999999999999998999888765
No 153
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=56.63 E-value=7.5 Score=26.28 Aligned_cols=32 Identities=9% Similarity=0.158 Sum_probs=25.3
Q ss_pred CCCCccccchhHHHHhhhcCCCChHHHHHHHh
Q 020142 219 PLLRLDQDVPAIYEFFWSHGMISDEIGLTIMS 250 (330)
Q Consensus 219 g~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~ 250 (330)
|.+||.+...--.+-|+..|+||.+++..+.+
T Consensus 12 Giidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 12 GIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp SEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 66788877666667799999999999988765
No 154
>PLN02429 triosephosphate isomerase
Probab=56.57 E-value=27 Score=33.85 Aligned_cols=61 Identities=21% Similarity=0.324 Sum_probs=44.2
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 153 ASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
.+.++.+..++++|+.. +.+-....+-|. |||-.-|.-+.+|... -++.|+.||.+.+++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~--------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE--------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC--------CCCCEEEeecceecHH
Confidence 35678889999999865 322222233332 9999999999888765 3588999999998764
No 155
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=53.51 E-value=19 Score=34.36 Aligned_cols=36 Identities=25% Similarity=0.402 Sum_probs=29.9
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccc
Q 020142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGH 188 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 188 (330)
.++++.+++.+......-|+=...++|++|||-|..
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 466788888888888888888777899999998754
No 156
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=53.22 E-value=59 Score=33.84 Aligned_cols=85 Identities=11% Similarity=0.044 Sum_probs=48.1
Q ss_pred cccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCC
Q 020142 126 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 205 (330)
Q Consensus 126 anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~ 205 (330)
..++-||-+ |-|.|.... . -++-..+++.+++....+.. ...+++++|+|.||..+...+..+.....
T Consensus 221 f~V~~iDwr-gpg~s~~~~----~-~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~--- 288 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADK----T-FDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD--- 288 (532)
T ss_pred cEEEEEECC-CCCcccccC----C-hhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC---
Confidence 356667754 777663321 1 11222234555665554433 35679999999999987653333322210
Q ss_pred CceeeeeEEEecCCCCCcc
Q 020142 206 GFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 206 ~~~inLkGi~igng~~d~~ 224 (330)
.-.++++++.+..+|..
T Consensus 289 --~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 --DKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCccceEEEEecCcCCC
Confidence 11377888777777754
No 157
>PLN02561 triosephosphate isomerase
Probab=52.50 E-value=33 Score=32.19 Aligned_cols=60 Identities=17% Similarity=0.292 Sum_probs=43.8
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCc
Q 020142 153 ASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~ 223 (330)
.+.++++..++++++.+ +..-....+-|. |||-.-|.=+.+|... .++.|+.||.+.+|+
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ--------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--------CCCCeEEEehHhhHH
Confidence 45678889999998864 332222233332 8999999999888764 368999999999986
No 158
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=51.93 E-value=17 Score=33.01 Aligned_cols=58 Identities=24% Similarity=0.287 Sum_probs=40.1
Q ss_pred CCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHH
Q 020142 135 AGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 199 (330)
Q Consensus 135 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (330)
-|||-|.+.-.. ..++.++|....+.++ ++||+-+. +.+.|-|+|+..+-.+|.+..+
T Consensus 69 RgVG~S~G~fD~--GiGE~~Da~aaldW~~---~~hp~s~~--~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 69 RGVGRSQGEFDN--GIGELEDAAAALDWLQ---ARHPDSAS--CWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred cccccccCcccC--CcchHHHHHHHHHHHH---hhCCCchh--hhhcccchHHHHHHHHHHhccc
Confidence 499999765433 3466666766666666 47885533 6999999998777777766544
No 159
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=51.80 E-value=41 Score=31.27 Aligned_cols=59 Identities=25% Similarity=0.504 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 154 STARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
+.+++...++++++.. +.+ ....+-|. |||-.-|.=+..+.+.. ++.|+.+|.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCHH
Confidence 5578889999999865 333 23333333 99999998888887653 488999999988753
No 160
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=51.39 E-value=29 Score=32.71 Aligned_cols=63 Identities=17% Similarity=0.308 Sum_probs=36.0
Q ss_pred chhhHHHHHHHHHHHHHH-C-----CCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 152 DASTARDMHVFMMNWYEK-F-----PEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 152 ~~~~a~d~~~fL~~f~~~-f-----p~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
+.+.+.++.+++.+=++. . |++ .++.|+|||=||+-+-.+|.... +. ...+++++++..+|.-
T Consensus 63 ~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~~~--~~---~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 63 EVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALGNA--SS---SLDLRFSALILLDPVD 131 (259)
T ss_pred hHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhhhc--cc---ccccceeEEEEecccc
Confidence 344555555555442211 1 233 25999999999995444433321 11 1246789999887753
No 161
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=51.16 E-value=63 Score=24.36 Aligned_cols=78 Identities=21% Similarity=0.218 Sum_probs=45.0
Q ss_pred eeEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCccccc
Q 020142 64 RSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSN 143 (330)
Q Consensus 64 ~~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~ 143 (330)
.+||+..++..+. .+.+|+.++|--..|.- +..+.+ . + +. +-.+|.-+|+. |-|.|-..
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r-y~~~a~---~--------L--~~----~G~~V~~~D~r-GhG~S~g~ 60 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGR-YAHLAE---F--------L--AE----QGYAVFAYDHR-GHGRSEGK 60 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHH-HHHHHH---H--------H--Hh----CCCEEEEECCC-cCCCCCCc
Confidence 3577665555332 68999999987444433 233221 1 1 11 22457779987 99999642
Q ss_pred CCCCCCCCchhhHHHHHHHHH
Q 020142 144 TTSDYNCGDASTARDMHVFMM 164 (330)
Q Consensus 144 ~~~~~~~~~~~~a~d~~~fL~ 164 (330)
..+..+-++..+|+..|++
T Consensus 61 --rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 61 --RGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred --ccccCCHHHHHHHHHHHhC
Confidence 2233455666677776653
No 162
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.41 E-value=25 Score=34.73 Aligned_cols=49 Identities=16% Similarity=0.235 Sum_probs=34.2
Q ss_pred CCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccc
Q 020142 175 SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 225 (330)
Q Consensus 175 ~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~ 225 (330)
-+++||..||.|..-+-...+++.-++.+ .....++=+++-.|-+|-..
T Consensus 190 ~~~I~ilAHSMGtwl~~e~LrQLai~~~~--~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALRQLAIRADR--PLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred CceEEEEEecchHHHHHHHHHHHhccCCc--chhhhhhheEeeCCCCChhh
Confidence 34699999999987766666666554432 13456788888888777653
No 163
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=48.68 E-value=21 Score=32.17 Aligned_cols=35 Identities=20% Similarity=0.366 Sum_probs=28.8
Q ss_pred HHHHHHCCCCCCCCeEEEcccccccchHHHHHHHH
Q 020142 164 MNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 198 (330)
Q Consensus 164 ~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~ 198 (330)
.+|++.+|+-..+++-|.|-|.||-.+-.+|....
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~ 44 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP 44 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC
Confidence 46889999999889999999999999888887754
No 164
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=48.68 E-value=62 Score=34.58 Aligned_cols=120 Identities=19% Similarity=0.223 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCcccccc----------ccceecCCCCcC---cccccC
Q 020142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKAS----------NLLFVESPAGVG---WSYSNT 144 (330)
Q Consensus 78 ~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~a----------nllfiDqPvGtG---fSy~~~ 144 (330)
..-|+++.+-||||.- ++.|.++|.+.- =|++||.. |+- .-+...
T Consensus 640 kkYptvl~VYGGP~VQ---------------------lVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~hRGlkFE~~ 697 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQ---------------------LVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSAHRGLKFESH 697 (867)
T ss_pred CCCceEEEEcCCCceE---------------------EeeccccceehhhhhhhhhcceEEEEEcCC-CccccchhhHHH
Confidence 4479999999999732 445666776542 35788943 321 110000
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHCCCCCC-CCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCc
Q 020142 145 TSDYNCGDASTARDMHVFMMNWYEKFPEFKS-RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 145 ~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~ 223 (330)
-...++.-+ ++|-++-|+-.-++. .|.. ..+-|-|-||||...-+ .|.+.. .| ++-.+-|.|.++.
T Consensus 698 -ik~kmGqVE-~eDQVeglq~Laeq~-gfidmdrV~vhGWSYGGYLSlm---~L~~~P------~I-frvAIAGapVT~W 764 (867)
T KOG2281|consen 698 -IKKKMGQVE-VEDQVEGLQMLAEQT-GFIDMDRVGVHGWSYGGYLSLM---GLAQYP------NI-FRVAIAGAPVTDW 764 (867)
T ss_pred -HhhccCeee-ehhhHHHHHHHHHhc-CcccchheeEeccccccHHHHH---HhhcCc------ce-eeEEeccCcceee
Confidence 001122211 233334443222222 2322 35999999999964322 233322 22 6666778888877
Q ss_pred cccchhHHH
Q 020142 224 DQDVPAIYE 232 (330)
Q Consensus 224 ~~~~~~~~~ 232 (330)
..=-.+|.+
T Consensus 765 ~~YDTgYTE 773 (867)
T KOG2281|consen 765 RLYDTGYTE 773 (867)
T ss_pred eeecccchh
Confidence 543333433
No 165
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=45.88 E-value=35 Score=32.00 Aligned_cols=66 Identities=18% Similarity=0.284 Sum_probs=36.8
Q ss_pred cccceecCCCCcCcccccCCCCCCCCc-hhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHH
Q 020142 126 SNLLFVESPAGVGWSYSNTTSDYNCGD-ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 195 (330)
Q Consensus 126 anllfiDqPvGtGfSy~~~~~~~~~~~-~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (330)
..||-.|-- |.|=|.....+.....- +-+-.|+-..|..-=++-| ..|.|.+|||+||+-.-.+++
T Consensus 58 f~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 58 FEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred ceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccccc
Confidence 356667744 88877765443321221 1122344444432222233 568999999999997665543
No 166
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=44.91 E-value=62 Score=30.26 Aligned_cols=60 Identities=20% Similarity=0.398 Sum_probs=43.6
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 153 ASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
.+.++++..|+++++.. +. -....+-|. |||-.-|.=+..+... -++.|+.+|.+.+++.
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ--------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEeeeeechH
Confidence 35678899999998864 32 112233332 9999999999888764 3588999999988764
No 167
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=44.10 E-value=13 Score=33.38 Aligned_cols=16 Identities=38% Similarity=0.870 Sum_probs=13.7
Q ss_pred CCCCEEEEEcCCCChh
Q 020142 78 HEKPLTLWLNGGPGCS 93 (330)
Q Consensus 78 ~~~PlvlWlnGGPG~S 93 (330)
.+.|-|+|+=|||||-
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 4678899999999975
No 168
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=43.71 E-value=26 Score=33.94 Aligned_cols=90 Identities=19% Similarity=0.168 Sum_probs=52.3
Q ss_pred ccCCCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCc
Q 020142 73 AEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGD 152 (330)
Q Consensus 73 s~~~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~ 152 (330)
+..+..+.|-++-++|==|.--.+ .-+. .+-+ .++- +.+.=||.- --|.|-... ..+-
T Consensus 45 ~~~~~~~~Pp~i~lHGl~GS~~Nw-~sv~------k~Ls-~~l~---------~~v~~vd~R-nHG~Sp~~~----~h~~ 102 (315)
T KOG2382|consen 45 SSENLERAPPAIILHGLLGSKENW-RSVA------KNLS-RKLG---------RDVYAVDVR-NHGSSPKIT----VHNY 102 (315)
T ss_pred cccccCCCCceEEecccccCCCCH-HHHH------HHhc-cccc---------CceEEEecc-cCCCCcccc----ccCH
Confidence 344667889999999854432111 1100 0000 0010 145556644 667664322 3456
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 020142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAG 187 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG 187 (330)
+..|+|+..||...-. .++..+..|.|||.||
T Consensus 103 ~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 103 EAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred HHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 7788898888876443 2346689999999999
No 169
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=42.54 E-value=22 Score=35.28 Aligned_cols=39 Identities=13% Similarity=0.223 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHH
Q 020142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVL 197 (330)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i 197 (330)
.+..+...+++-++. .++++.|+|||+||.++-.+-...
T Consensus 102 ~~~~lk~~ie~~~~~----~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 102 YFTKLKQLIEEAYKK----NGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHHHh----cCCcEEEEEeCCCchHHHHHHHhc
Confidence 334444555554433 267899999999999877766555
No 170
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=42.09 E-value=29 Score=30.47 Aligned_cols=78 Identities=21% Similarity=0.275 Sum_probs=47.2
Q ss_pred ecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHH--HHHhcccCCCce
Q 020142 131 VESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV--LLDHNAHSKGFK 208 (330)
Q Consensus 131 iDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~--i~~~n~~~~~~~ 208 (330)
|+-|+..+.. .|..+..+-++++...++++..+-| +.++.|+|-|-|+..+-.++.. +... ..
T Consensus 45 V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~~~l~~~------~~ 109 (179)
T PF01083_consen 45 VEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSGDGLPPD------VA 109 (179)
T ss_dssp --S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHTTSSHH------HH
T ss_pred cCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHhccCChh------hh
Confidence 5566666552 1223445667788899999999998 4589999999998877666655 1111 11
Q ss_pred eeeeE-EEecCCCCCc
Q 020142 209 FNIKG-VAIGNPLLRL 223 (330)
Q Consensus 209 inLkG-i~igng~~d~ 223 (330)
=++.+ +.+|||.-.+
T Consensus 110 ~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 110 DRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHEEEEEEES-TTTBT
T ss_pred hhEEEEEEecCCcccC
Confidence 24556 5678886643
No 171
>COG0218 Predicted GTPase [General function prediction only]
Probab=42.04 E-value=49 Score=29.97 Aligned_cols=61 Identities=25% Similarity=0.322 Sum_probs=36.5
Q ss_pred CCCC-CEEEEEcC-CCChhhhhhhhhhc-cCCcee-cCCCCCccccCCccccccccceecCCCCcCccc
Q 020142 77 PHEK-PLTLWLNG-GPGCSSVGGGAFTE-LGPFYP-RGDGRGLRRNSMSWNKASNLLFVESPAGVGWSY 141 (330)
Q Consensus 77 ~~~~-PlvlWlnG-GPG~SS~~~g~~~E-~GP~~~-~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy 141 (330)
|+++ |=|.+.-. -=|=||+ +-.+.. -+=-|. +..|+|...|-+.|.+. +.+||-| |.||--
T Consensus 20 P~~~~~EIaF~GRSNVGKSSl-IN~l~~~k~LArtSktPGrTq~iNff~~~~~--~~lVDlP-GYGyAk 84 (200)
T COG0218 20 PEDDLPEIAFAGRSNVGKSSL-INALTNQKNLARTSKTPGRTQLINFFEVDDE--LRLVDLP-GYGYAK 84 (200)
T ss_pred CCCCCcEEEEEccCcccHHHH-HHHHhCCcceeecCCCCCccceeEEEEecCc--EEEEeCC-Cccccc
Confidence 4433 44444433 4577888 555532 221222 23466778888888876 7799999 777664
No 172
>PRK14565 triosephosphate isomerase; Provisional
Probab=41.81 E-value=53 Score=30.53 Aligned_cols=54 Identities=17% Similarity=0.276 Sum_probs=40.4
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccc
Q 020142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 225 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~ 225 (330)
.+.+++...+++++. .+--.| |||..-|.-+..+.+. -++.|+.||.+.+++..
T Consensus 173 ~e~i~~~~~~Ir~~~-------~~~~Il----YGGSV~~~N~~~l~~~--------~~iDG~LvG~asl~~~~ 226 (237)
T PRK14565 173 NDAIAEAFEIIRSYD-------SKSHII----YGGSVNQENIRDLKSI--------NQLSGVLVGSASLDVDS 226 (237)
T ss_pred HHHHHHHHHHHHHhC-------CCceEE----EcCccCHhhHHHHhcC--------CCCCEEEEechhhcHHH
Confidence 456788889998862 111233 9999999999998874 25899999999987653
No 173
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=41.78 E-value=81 Score=29.83 Aligned_cols=66 Identities=24% Similarity=0.174 Sum_probs=43.4
Q ss_pred hhhHHHHHHHHHHHHHHCCC--C-CCCCeEEEcccccccchHHHHHHHHHhcccCCCceee--eeEEEecCCCCCc
Q 020142 153 ASTARDMHVFMMNWYEKFPE--F-KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFN--IKGVAIGNPLLRL 223 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~--~-~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~in--LkGi~igng~~d~ 223 (330)
...|.++++.++.-.+..+. + .+.++.|+|.|=||+=. ..|.++...- .+.++ |+|.+.|.+..|.
T Consensus 45 ~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~Y----ApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 45 RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPSY----APELNRDLVGAAAGGPPADL 115 (290)
T ss_pred HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHHh----CcccccceeEEeccCCccCH
Confidence 45566667666665544442 2 35689999999998743 3444443321 25688 9999999987765
No 174
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=41.63 E-value=27 Score=37.92 Aligned_cols=40 Identities=15% Similarity=0.137 Sum_probs=27.0
Q ss_pred CchhhHHHHHHHHHH---HHHHCCCCC---CCCeEEEcccccccch
Q 020142 151 GDASTARDMHVFMMN---WYEKFPEFK---SRELFLTGESYAGHYI 190 (330)
Q Consensus 151 ~~~~~a~d~~~fL~~---f~~~fp~~~---~~~~yi~GESYgG~yv 190 (330)
...+.++.+.+.++. -++.-+||+ ...+.|.||||||..+
T Consensus 151 ~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 151 ILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHH
Confidence 345666666666554 444456676 4459999999999753
No 175
>PTZ00333 triosephosphate isomerase; Provisional
Probab=40.45 E-value=64 Score=30.23 Aligned_cols=60 Identities=18% Similarity=0.378 Sum_probs=43.3
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCc
Q 020142 153 ASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~ 223 (330)
.+.++++..++++++.. +.......+-|. |||-.-|.-+..|... -++.|+.||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ--------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEehHhhhh
Confidence 46688899999998864 322222223222 8999999999888764 358999999998873
No 176
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=39.81 E-value=55 Score=34.89 Aligned_cols=61 Identities=21% Similarity=0.406 Sum_probs=44.9
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 153 ASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
.+.|+++..||++++.. +-+-....+=|. |||-.-|.-+..|.... ++.|+.||...+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP--------DIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEeehHhcCHH
Confidence 46788999999999864 322112223222 99999999999998753 588999999988775
No 177
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=39.69 E-value=22 Score=35.25 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=22.1
Q ss_pred CeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccc
Q 020142 177 ELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 225 (330)
Q Consensus 177 ~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~ 225 (330)
++-++||||||--+-..+ .+. ..++..++.+||.-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l---~~d--------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQAL---RQD--------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHH---HH---------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHH---hhc--------cCcceEEEeCCcccCCC
Confidence 599999999997554333 222 23678889999988754
No 178
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=39.51 E-value=26 Score=33.70 Aligned_cols=51 Identities=24% Similarity=0.569 Sum_probs=36.4
Q ss_pred cccccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccc
Q 020142 122 WNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHY 189 (330)
Q Consensus 122 W~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 189 (330)
.++.+-|+-||-|+|+|.|. .|+++.+-|- |..||++.-..+|+ .|||+-.
T Consensus 67 f~enSkvI~VeGnI~sGK~k-------------lAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~D~ 117 (393)
T KOG3877|consen 67 FHENSKVIVVEGNIGSGKTK-------------LAKELAEQLG--FVHFPEFRMDDIYV--DSYGNDL 117 (393)
T ss_pred hcccceEEEEeCCcccCchh-------------HHHHHHHHhC--Ccccccccccceee--cccCccc
Confidence 44567789999999999772 3444444443 56799998877777 7888743
No 179
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=38.64 E-value=64 Score=33.24 Aligned_cols=42 Identities=19% Similarity=0.245 Sum_probs=34.4
Q ss_pred CCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchH
Q 020142 150 CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIP 191 (330)
Q Consensus 150 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp 191 (330)
-+.+|+-.|+..|++.-=.+|+.-.+.|++.+|-||.|....
T Consensus 146 LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsA 187 (514)
T KOG2182|consen 146 LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSA 187 (514)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHH
Confidence 456788899999999888888766666999999999986543
No 180
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=37.03 E-value=71 Score=32.91 Aligned_cols=113 Identities=23% Similarity=0.428 Sum_probs=65.9
Q ss_pred eEEEEEEEccCCCCCCCEEEEEcCCCChhhhhhhhh--hcc-CCceecCCCCCccccCCccccccccceecCCCCcCccc
Q 020142 65 SLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAF--TEL-GPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSY 141 (330)
Q Consensus 65 ~lFy~~~es~~~~~~~PlvlWlnGGPG~SS~~~g~~--~E~-GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy 141 (330)
.++|+|-+..- .-||.+++.|=-.+-+.. |.+ -.+ .|| |||=|+.+--|==|
T Consensus 277 Ei~yYFnPGD~---KPPL~VYFSGyR~aEGFE-gy~MMk~Lg~Pf---------------------LL~~DpRleGGaFY 331 (511)
T TIGR03712 277 EFIYYFNPGDF---KPPLNVYFSGYRPAEGFE-GYFMMKRLGAPF---------------------LLIGDPRLEGGAFY 331 (511)
T ss_pred eeEEecCCcCC---CCCeEEeeccCcccCcch-hHHHHHhcCCCe---------------------EEeeccccccceee
Confidence 46666545432 349999999966666653 433 232 233 45556454444222
Q ss_pred ccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 142 SNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 142 ~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
.+.++--+.+.+.+++-++.- .|+.+++.|.|=|+|..=+-+.++ .++-++|++|=|.+
T Consensus 332 --------lGs~eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga------------~l~P~AIiVgKPL~ 390 (511)
T TIGR03712 332 --------LGSDEYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA------------KLSPHAIIVGKPLV 390 (511)
T ss_pred --------eCcHHHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc------------cCCCceEEEcCccc
Confidence 122333344556666655443 677889999999998543333332 35667888887776
Q ss_pred Cc
Q 020142 222 RL 223 (330)
Q Consensus 222 d~ 223 (330)
+-
T Consensus 391 NL 392 (511)
T TIGR03712 391 NL 392 (511)
T ss_pred ch
Confidence 53
No 181
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=36.95 E-value=75 Score=29.72 Aligned_cols=62 Identities=21% Similarity=0.223 Sum_probs=31.7
Q ss_pred chhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 152 DASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 152 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
..+.|+-+...|+.- ++ +|.=+.+-++|||+||.-+ ..++.+......-|+++ |=|.||.|.
T Consensus 82 ~~~qa~wl~~vl~~L-~~--~Y~~~~~N~VGHSmGg~~~---~~yl~~~~~~~~~P~l~-K~V~Ia~pf 143 (255)
T PF06028_consen 82 YKKQAKWLKKVLKYL-KK--KYHFKKFNLVGHSMGGLSW---TYYLENYGNDKNLPKLN-KLVTIAGPF 143 (255)
T ss_dssp HHHHHHHHHHHHHHH-HH--CC--SEEEEEEETHHHHHH---HHHHHHCTTGTTS-EEE-EEEEES--T
T ss_pred HHHHHHHHHHHHHHH-HH--hcCCCEEeEEEECccHHHH---HHHHHHhccCCCCcccc-eEEEecccc
Confidence 445566665555543 33 4445579999999999744 44554432211112332 455666554
No 182
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=36.48 E-value=31 Score=30.04 Aligned_cols=39 Identities=10% Similarity=0.122 Sum_probs=26.4
Q ss_pred CCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCC
Q 020142 175 SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (330)
Q Consensus 175 ~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 222 (330)
..+.+|+|||.|..-+-..+. +.. ..+++|+++..|.-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~---~~~------~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA---EQS------QKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH---HTC------CSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh---hcc------cccccEEEEEcCCCc
Confidence 457999999999875554443 221 347999999999843
No 183
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=34.74 E-value=2.2e+02 Score=29.02 Aligned_cols=33 Identities=15% Similarity=0.150 Sum_probs=23.3
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEcccccccchHHH
Q 020142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQL 193 (330)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~l 193 (330)
++++++....|- =..+++-|+|||.||..|-.+
T Consensus 180 L~wv~~~I~~FG-Gdp~~vTl~G~saGa~~v~~l 212 (545)
T KOG1516|consen 180 LRWVKDNIPSFG-GDPKNVTLFGHSAGAASVSLL 212 (545)
T ss_pred HHHHHHHHHhcC-CCCCeEEEEeechhHHHHHHH
Confidence 356666666664 234569999999999887554
No 184
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=34.53 E-value=17 Score=32.71 Aligned_cols=37 Identities=22% Similarity=0.031 Sum_probs=27.7
Q ss_pred eEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 178 LFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 178 ~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
..|+|.|.||.-+-.+|.+ +.+ -+.+++.-+|.+++.
T Consensus 117 ~~i~G~S~GG~~Al~~~l~---~Pd-------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALR---HPD-------LFGAVIAFSGALDPS 153 (251)
T ss_dssp EEEEEETHHHHHHHHHHHH---STT-------TESEEEEESEESETT
T ss_pred eEEeccCCCcHHHHHHHHh---Ccc-------ccccccccCcccccc
Confidence 8999999999876666544 221 377888888887766
No 185
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=33.80 E-value=40 Score=27.95 Aligned_cols=12 Identities=17% Similarity=0.672 Sum_probs=7.8
Q ss_pred cchhhHHHHHHH
Q 020142 3 RWCFGGFLNISL 14 (330)
Q Consensus 3 ~~~~~~~~~~~~ 14 (330)
||++-.++.+++
T Consensus 1 RW~l~~iii~~i 12 (130)
T PF12273_consen 1 RWVLFAIIIVAI 12 (130)
T ss_pred CeeeHHHHHHHH
Confidence 688776665544
No 186
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=33.58 E-value=74 Score=31.59 Aligned_cols=57 Identities=19% Similarity=0.304 Sum_probs=39.6
Q ss_pred CCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCC
Q 020142 148 YNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (330)
Q Consensus 148 ~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 219 (330)
+..++..+++...+|-.+=+ .|+..++.|.|-|-||.-+.-.|.-. -++|++++-.-
T Consensus 287 ~p~n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~Y-----------PdVkavvLDAt 343 (517)
T KOG1553|consen 287 YPVNTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASNY-----------PDVKAVVLDAT 343 (517)
T ss_pred CcccchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhcC-----------CCceEEEeecc
Confidence 45566666666667665533 66788999999999999777666432 35788776543
No 187
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=33.48 E-value=25 Score=23.14 Aligned_cols=11 Identities=45% Similarity=1.189 Sum_probs=5.9
Q ss_pred CEEEEEcCCCC
Q 020142 81 PLTLWLNGGPG 91 (330)
Q Consensus 81 PlvlWlnGGPG 91 (330)
--+||++|-||
T Consensus 25 gRTiWFqGdPG 35 (39)
T PF09292_consen 25 GRTIWFQGDPG 35 (39)
T ss_dssp S-EEEESS---
T ss_pred CCEEEeeCCCC
Confidence 45789999887
No 188
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=33.42 E-value=88 Score=28.61 Aligned_cols=48 Identities=19% Similarity=0.296 Sum_probs=32.5
Q ss_pred CCchhhHHHHHHHHHHHHHHCCCCC-CCCeEEEcccccccchHHHHHHHHHh
Q 020142 150 CGDASTARDMHVFMMNWYEKFPEFK-SRELFLTGESYAGHYIPQLADVLLDH 200 (330)
Q Consensus 150 ~~~~~~a~d~~~fL~~f~~~fp~~~-~~~~yi~GESYgG~yvp~la~~i~~~ 200 (330)
++++.+++.+.+.+.+.+..-++-. ...+.-+| ||||+|.+...+++.
T Consensus 104 W~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 104 WNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp HT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred hCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 5677888888888888887755433 14566677 899999999888875
No 189
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=33.24 E-value=30 Score=33.85 Aligned_cols=68 Identities=19% Similarity=0.299 Sum_probs=38.5
Q ss_pred ccccceecCCCCcC-ccccc----------CCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHH
Q 020142 125 ASNLLFVESPAGVG-WSYSN----------TTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQL 193 (330)
Q Consensus 125 ~anllfiDqPvGtG-fSy~~----------~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~l 193 (330)
..-|+|-||-|||| |--.- ..+-+..+..+-....|.||.+.|+ = ...+|++|-|=|..-+=.+
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~ye----p-GD~Iy~FGFSRGAf~aRVl 139 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYE----P-GDEIYAFGFSRGAFSARVL 139 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcC----C-CCeEEEeeccchhHHHHHH
Confidence 34578999888876 22111 0011122333444555677776443 1 4579999999886555555
Q ss_pred HHHH
Q 020142 194 ADVL 197 (330)
Q Consensus 194 a~~i 197 (330)
|..|
T Consensus 140 agmi 143 (423)
T COG3673 140 AGMI 143 (423)
T ss_pred HHHH
Confidence 5444
No 190
>COG4425 Predicted membrane protein [Function unknown]
Probab=32.10 E-value=60 Score=33.17 Aligned_cols=36 Identities=25% Similarity=0.494 Sum_probs=30.4
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccc
Q 020142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGH 188 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 188 (330)
..+|+.+.+........-|+=...++|+.|||-|..
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 467888888888888889988888899999998754
No 191
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=31.47 E-value=67 Score=29.43 Aligned_cols=43 Identities=14% Similarity=0.242 Sum_probs=32.7
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHH
Q 020142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 196 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~ 196 (330)
.+...|+..++ .|+.+.|+-...++.++|-|+||+.+-.+|..
T Consensus 90 ~~~~~d~~a~~-~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~ 132 (236)
T COG0412 90 AEVLADIDAAL-DYLARQPQVDPKRIGVVGFCMGGGLALLAATR 132 (236)
T ss_pred HHHHHHHHHHH-HHHHhCCCCCCceEEEEEEcccHHHHHHhhcc
Confidence 45556665555 57888887777789999999999987766654
No 192
>PRK15492 triosephosphate isomerase; Provisional
Probab=31.07 E-value=1.1e+02 Score=28.82 Aligned_cols=60 Identities=22% Similarity=0.337 Sum_probs=44.1
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 153 ASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
.+.+++...++++++.. +-+- ...+-|. |||-.-|.-+..|.... ++.|+.||...+++.
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~--------diDG~LvG~aSl~~~ 248 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP--------HIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC--------CCCEEEeehhhcCHH
Confidence 35567888999998753 3322 2233333 99999999999998753 588999999988875
No 193
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=30.80 E-value=62 Score=28.74 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=23.5
Q ss_pred CCCCCCeEEEcccccccchHHHHHHHHH
Q 020142 172 EFKSRELFLTGESYAGHYIPQLADVLLD 199 (330)
Q Consensus 172 ~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (330)
....-|+.|-|+||||.....+|.++..
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcC
Confidence 5556689999999999999988887754
No 194
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=30.48 E-value=52 Score=28.74 Aligned_cols=58 Identities=17% Similarity=0.456 Sum_probs=30.5
Q ss_pred ccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCCCC--eEEE-cccccc
Q 020142 127 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRE--LFLT-GESYAG 187 (330)
Q Consensus 127 nllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~--~yi~-GESYgG 187 (330)
++++.|.|-++|..|... ...++....++...++..++...-+..+.. ++|. +.+.-.
T Consensus 2 dliitDPPY~~~~~~~~~---~~~~~~~~~~~y~~~~~~~~~~~~rvLk~~g~~~i~~~~~~~~ 62 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNY---FDYGDNKNHEEYLEWMEEWLKECYRVLKPGGSIFIFIDDREIA 62 (231)
T ss_dssp EEEEE---TSSSCS--------CSCHCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE-CCEEC
T ss_pred CEEEECCCCCCCCCcchh---hhccCCCCHHHHHHHHHHHHHHHHhhcCCCeeEEEEecchhhh
Confidence 689999999999997221 123445556777788888776533332222 4443 555543
No 195
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=30.43 E-value=1.6e+02 Score=29.02 Aligned_cols=56 Identities=18% Similarity=0.133 Sum_probs=36.8
Q ss_pred HHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 161 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 161 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
..|-+.+....+ ..||+-|+|+|-|+.-|=....++.+++.. .+--.-+++|.|..
T Consensus 206 ~~LA~~L~~~~~-G~RpVtLvG~SLGarvI~~cL~~L~~~~~~----~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 206 KVLADALLSRNQ-GERPVTLVGHSLGARVIYYCLLELAERKAF----GLVENVVLMGAPVP 261 (345)
T ss_pred HHHHHHHHHhcC-CCCceEEEeecccHHHHHHHHHHHHhcccc----CeEeeEEEecCCCC
Confidence 444444444333 678999999999999998888888876432 23234455666543
No 196
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=30.23 E-value=30 Score=34.42 Aligned_cols=59 Identities=25% Similarity=0.382 Sum_probs=34.7
Q ss_pred CCCCEEEEEcCCCCh--hhhhhhhhhccCCceec--CCC---CCccccCCccccccccceecCCCCcC
Q 020142 78 HEKPLTLWLNGGPGC--SSVGGGAFTELGPFYPR--GDG---RGLRRNSMSWNKASNLLFVESPAGVG 138 (330)
Q Consensus 78 ~~~PlvlWlnGGPG~--SS~~~g~~~E~GP~~~~--~~~---~~~~~n~~sW~~~anllfiDqPvGtG 138 (330)
++.|+=|-+.|-+|+ ||+ +-.+..+|+=.-. +.| .+.++.+|.--++-||.++|-| |+|
T Consensus 32 ~~~~l~IaV~G~sGsGKSSf-INalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 32 DNAPLNIAVTGESGSGKSSF-INALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp HH--EEEEEEESTTSSHHHH-HHHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred hcCceEEEEECCCCCCHHHH-HHHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 456888888895554 787 7888777763211 111 2466778888889999999999 887
No 197
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=29.98 E-value=1e+02 Score=27.45 Aligned_cols=66 Identities=11% Similarity=-0.020 Sum_probs=35.5
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccc
Q 020142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 225 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~ 225 (330)
...++.++.|.++.++..-| .=|.|-|-|+..+..++....+..... ....+|-+++-+|+.-+..
T Consensus 84 ~~~~~sl~~l~~~i~~~GPf----dGvlGFSQGA~lAa~ll~~~~~~~~~~--~~~~~kf~V~~sg~~p~~~ 149 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGPF----DGVLGFSQGAALAALLLALQQRGRPDG--AHPPFKFAVFISGFPPPDP 149 (212)
T ss_dssp ---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST----T----SEEEEES----EEE
T ss_pred cCHHHHHHHHHHHHHhcCCe----EEEEeecHHHHHHHHHHHHHHhhcccc--cCCCceEEEEEcccCCCch
Confidence 33456667777777764433 348999999998888877666543210 2456788888788765433
No 198
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=28.75 E-value=82 Score=30.51 Aligned_cols=45 Identities=18% Similarity=0.147 Sum_probs=35.9
Q ss_pred CchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHH
Q 020142 151 GDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 198 (330)
Q Consensus 151 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~ 198 (330)
+....++++...+.+-+.... .+++.|.|||.||.-+..++..+-
T Consensus 105 ~~~~~~~ql~~~V~~~l~~~g---a~~v~LigHS~GG~~~ry~~~~~~ 149 (336)
T COG1075 105 SLAVRGEQLFAYVDEVLAKTG---AKKVNLIGHSMGGLDSRYYLGVLG 149 (336)
T ss_pred cccccHHHHHHHHHHHHhhcC---CCceEEEeecccchhhHHHHhhcC
Confidence 455667888899988877654 468999999999999987776655
No 199
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=28.69 E-value=62 Score=30.61 Aligned_cols=56 Identities=18% Similarity=0.218 Sum_probs=32.1
Q ss_pred HHHHHHHHHH----HHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCC
Q 020142 156 ARDMHVFMMN----WYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (330)
Q Consensus 156 a~d~~~fL~~----f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 221 (330)
|..+.+||.+ |.+.-=+-++.+--|+|||+||.++- ..|+++.+ -+.-+++.+|.+
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl---~aLL~~p~-------~F~~y~~~SPSl 172 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVL---FALLTYPD-------CFGRYGLISPSL 172 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHH---HHHhcCcc-------hhceeeeecchh
Confidence 4455556554 55552233444589999999998754 33444422 144556666543
No 200
>PRK03995 hypothetical protein; Provisional
Probab=28.45 E-value=1e+02 Score=29.23 Aligned_cols=48 Identities=15% Similarity=0.265 Sum_probs=31.1
Q ss_pred CCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHh
Q 020142 150 CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (330)
Q Consensus 150 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (330)
+.+..+++.+.+.+.+.+..-+.-..+++.=+| ||||+|.+...+++.
T Consensus 156 W~d~~a~~~vA~avl~~l~~~~~~~~~~~iGiG---GgHYapr~T~~~l~~ 203 (267)
T PRK03995 156 WKNERAGEILAEAVIEVLDSIEYEKFKPAIGIG---GGHYAPKFTKLALES 203 (267)
T ss_pred hCCcHHHHHHHHHHHHHHhcccccCCCEEEEEC---CCCccHHHHHHHhhC
Confidence 455566666666776666432222233566667 899999999888764
No 201
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.39 E-value=1.5e+02 Score=27.63 Aligned_cols=24 Identities=25% Similarity=0.530 Sum_probs=16.8
Q ss_pred CCCCeEEEcccccccchHHHHHHH
Q 020142 174 KSRELFLTGESYAGHYIPQLADVL 197 (330)
Q Consensus 174 ~~~~~yi~GESYgG~yvp~la~~i 197 (330)
+...+|++.|||||.--..+..+.
T Consensus 188 ~~~sv~vvahsyGG~~t~~l~~~f 211 (297)
T KOG3967|consen 188 KAESVFVVAHSYGGSLTLDLVERF 211 (297)
T ss_pred CcceEEEEEeccCChhHHHHHHhc
Confidence 345799999999997544444433
No 202
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=28.00 E-value=58 Score=33.28 Aligned_cols=44 Identities=11% Similarity=0.175 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHHHHHHCCCCCC-CCeEEEcccccccchHHHHHHH
Q 020142 154 STARDMHVFMMNWYEKFPEFKS-RELFLTGESYAGHYIPQLADVL 197 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~i 197 (330)
+..++.+.-|++.++..-...+ +++.|++||.||.|+-.+-...
T Consensus 159 e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 159 EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 4445555555555544323334 8999999999999987775443
No 203
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=27.83 E-value=1.7e+02 Score=28.00 Aligned_cols=92 Identities=18% Similarity=0.241 Sum_probs=50.5
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCC---CCCCCch
Q 020142 77 PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTS---DYNCGDA 153 (330)
Q Consensus 77 ~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~---~~~~~~~ 153 (330)
++..|+|+|=-=|-.|||..++.|.| +..| . |-..||+-...++ .......
T Consensus 21 ~s~~P~ii~HGigd~c~~~~~~~~~q------------~l~~-~-------------~g~~v~~leig~g~~~s~l~pl~ 74 (296)
T KOG2541|consen 21 PSPVPVIVWHGIGDSCSSLSMANLTQ------------LLEE-L-------------PGSPVYCLEIGDGIKDSSLMPLW 74 (296)
T ss_pred cccCCEEEEeccCcccccchHHHHHH------------HHHh-C-------------CCCeeEEEEecCCcchhhhccHH
Confidence 34489999866599999855566654 1111 1 2223333221111 1123333
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHH
Q 020142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 199 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (330)
++++..-+.+ ..-|++ ++-.+|.|.|-||..+=.+++....
T Consensus 75 ~Qv~~~ce~v----~~m~~l-sqGynivg~SQGglv~Raliq~cd~ 115 (296)
T KOG2541|consen 75 EQVDVACEKV----KQMPEL-SQGYNIVGYSQGGLVARALIQFCDN 115 (296)
T ss_pred HHHHHHHHHH----hcchhc-cCceEEEEEccccHHHHHHHHhCCC
Confidence 4443333333 345566 4579999999999876666655544
No 204
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=27.57 E-value=70 Score=28.52 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=26.0
Q ss_pred CCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCC
Q 020142 175 SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (330)
Q Consensus 175 ~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 220 (330)
.+|.||++||.|+.-+...+..+.. .++|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~----------~V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR----------QVAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh----------ccceEEEecCC
Confidence 5689999999997655555544432 47899888773
No 205
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=27.17 E-value=1.3e+02 Score=27.19 Aligned_cols=54 Identities=11% Similarity=0.033 Sum_probs=37.3
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCc
Q 020142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~ 223 (330)
+.++++..+++ + . .+... ++-|. |||-.-|.=+..+.... ++.|+.+|.+.+++
T Consensus 151 ~~~~~v~~~ir-~-~--~~~~~-~~~Il---YGGSV~~~N~~~l~~~~--------~iDG~LvG~Asl~a 204 (205)
T TIGR00419 151 AQPEVVHGSVR-A-V--KEVNE-SVRVL---CGAGISTGEDAELAAQL--------GAEGVLLASGSLKA 204 (205)
T ss_pred HHHHHHHHHHH-h-h--hhhcC-CceEE---EeCCCCHHHHHHHhcCC--------CCCEEEEeeeeecC
Confidence 55777888887 2 1 12222 23232 99999999888887653 58899999998865
No 206
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=26.85 E-value=54 Score=32.91 Aligned_cols=50 Identities=10% Similarity=0.050 Sum_probs=27.3
Q ss_pred HHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCC
Q 020142 161 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (330)
Q Consensus 161 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 219 (330)
+++++....|--= .+++-|+|||-||.-|-.+... ...+ . -++..|+-+|
T Consensus 194 ~WV~~nI~~FGGD-p~~VTl~G~SAGa~sv~~~l~s---p~~~----~-LF~raI~~SG 243 (535)
T PF00135_consen 194 KWVQDNIAAFGGD-PDNVTLFGQSAGAASVSLLLLS---PSSK----G-LFHRAILQSG 243 (535)
T ss_dssp HHHHHHGGGGTEE-EEEEEEEEETHHHHHHHHHHHG---GGGT----T-SBSEEEEES-
T ss_pred HHHHhhhhhcccC-Ccceeeeeecccccccceeeec---cccc----c-cccccccccc
Confidence 4555544444321 2349999999998866544333 1111 1 2566666666
No 207
>PRK06762 hypothetical protein; Provisional
Probab=26.70 E-value=39 Score=28.53 Aligned_cols=13 Identities=15% Similarity=0.414 Sum_probs=11.8
Q ss_pred CEEEEEcCCCChh
Q 020142 81 PLTLWLNGGPGCS 93 (330)
Q Consensus 81 PlvlWlnGGPG~S 93 (330)
|.++|+.|.|||-
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999999986
No 208
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=26.57 E-value=3e+02 Score=28.02 Aligned_cols=89 Identities=21% Similarity=0.169 Sum_probs=53.9
Q ss_pred CCCCCCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhh
Q 020142 76 EPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDAST 155 (330)
Q Consensus 76 ~~~~~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~ 155 (330)
...++|+||...|= |.| ..|.+- +-+=.=.+|.|+|+.- =-|=|.....+=-..+.+++
T Consensus 59 k~~drPtV~~T~GY-~~~---------~~p~r~----------Ept~Lld~NQl~vEhR-fF~~SrP~p~DW~~Lti~QA 117 (448)
T PF05576_consen 59 KDFDRPTVLYTEGY-NVS---------TSPRRS----------EPTQLLDGNQLSVEHR-FFGPSRPEPADWSYLTIWQA 117 (448)
T ss_pred cCCCCCeEEEecCc-ccc---------cCcccc----------chhHhhccceEEEEEe-eccCCCCCCCCcccccHhHh
Confidence 45678999998863 111 112221 1122234788888853 12223332211113567899
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccccc
Q 020142 156 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHY 189 (330)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 189 (330)
|.|..+..+.|-..+| + ++.-+|-|=||+-
T Consensus 118 A~D~Hri~~A~K~iY~---~-kWISTG~SKGGmT 147 (448)
T PF05576_consen 118 ASDQHRIVQAFKPIYP---G-KWISTGGSKGGMT 147 (448)
T ss_pred hHHHHHHHHHHHhhcc---C-CceecCcCCCcee
Confidence 9999999988865554 3 5888999999985
No 209
>COG1647 Esterase/lipase [General function prediction only]
Probab=26.41 E-value=1.6e+02 Score=27.45 Aligned_cols=55 Identities=15% Similarity=0.100 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCccccc
Q 020142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDV 227 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~~~~ 227 (330)
+.+.|-|++|.+ -.| ..++++|-|.||.+.--+|.. .++|+|+.-.+-+......
T Consensus 70 ~~v~d~Y~~L~~-----~gy--~eI~v~GlSmGGv~alkla~~------------~p~K~iv~m~a~~~~k~~~ 124 (243)
T COG1647 70 EDVEDGYRDLKE-----AGY--DEIAVVGLSMGGVFALKLAYH------------YPPKKIVPMCAPVNVKSWR 124 (243)
T ss_pred HHHHHHHHHHHH-----cCC--CeEEEEeecchhHHHHHHHhh------------CCccceeeecCCcccccch
Confidence 445566666652 123 369999999999876666632 5689999888877765443
No 210
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=26.18 E-value=92 Score=31.44 Aligned_cols=48 Identities=17% Similarity=0.364 Sum_probs=38.5
Q ss_pred CCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHHh
Q 020142 150 CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (330)
Q Consensus 150 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (330)
.+.++.|.|+-..+ +||.+ +++.+++.+.|-|+|.-..|..-.++...
T Consensus 303 rtPe~~a~Dl~r~i-~~y~~--~w~~~~~~liGySfGADvlP~~~n~L~~~ 350 (456)
T COG3946 303 RTPEQIAADLSRLI-RFYAR--RWGAKRVLLIGYSFGADVLPFAYNRLPPA 350 (456)
T ss_pred CCHHHHHHHHHHHH-HHHHH--hhCcceEEEEeecccchhhHHHHHhCCHH
Confidence 56788899986665 45655 67888999999999999999888777544
No 211
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=25.91 E-value=57 Score=34.50 Aligned_cols=22 Identities=9% Similarity=0.169 Sum_probs=18.3
Q ss_pred CCCeEEEcccccccchHHHHHH
Q 020142 175 SRELFLTGESYAGHYIPQLADV 196 (330)
Q Consensus 175 ~~~~yi~GESYgG~yvp~la~~ 196 (330)
++++.|+|||+||.++=.+-..
T Consensus 212 gkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHh
Confidence 5689999999999887776654
No 212
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=25.74 E-value=41 Score=29.15 Aligned_cols=14 Identities=36% Similarity=0.828 Sum_probs=11.1
Q ss_pred CCEEEEEcCCCChh
Q 020142 80 KPLTLWLNGGPGCS 93 (330)
Q Consensus 80 ~PlvlWlnGGPG~S 93 (330)
+|.+|||.|-||+-
T Consensus 1 ~g~vIwltGlsGsG 14 (156)
T PF01583_consen 1 KGFVIWLTGLSGSG 14 (156)
T ss_dssp S-EEEEEESSTTSS
T ss_pred CCEEEEEECCCCCC
Confidence 58999999988865
No 213
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=25.08 E-value=60 Score=27.28 Aligned_cols=17 Identities=35% Similarity=0.516 Sum_probs=14.9
Q ss_pred CCCCCEEEEEcCCCChh
Q 020142 77 PHEKPLTLWLNGGPGCS 93 (330)
Q Consensus 77 ~~~~PlvlWlnGGPG~S 93 (330)
..++||||=|+|.||+-
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 46789999999999976
No 214
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=24.32 E-value=58 Score=28.74 Aligned_cols=40 Identities=20% Similarity=0.344 Sum_probs=28.3
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccccchHHHH
Q 020142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLA 194 (330)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la 194 (330)
...+++. ....+++..|+-...++-++|-|+||.++-.+|
T Consensus 77 ~~~~~~~-aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 77 QVAADLQ-AAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HHHHHHH-HHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 3444443 334567777766677899999999998876555
No 215
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=23.91 E-value=35 Score=31.75 Aligned_cols=60 Identities=25% Similarity=0.468 Sum_probs=41.5
Q ss_pred hhhHHHHHHHHHHHHHH-C-CCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 153 ASTARDMHVFMMNWYEK-F-PEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~-f-p~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
.+.++.+..++++++.. + .+-..+--.| |||-.-|.=+..+... .++.|+.||.+.+++.
T Consensus 177 ~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL----YGGSV~~~N~~~l~~~--------~~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 177 PEQIQEVHAFIREILAELYGEEVANNIRIL----YGGSVNPENAAELLSQ--------PDIDGVLVGGASLKAE 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHSEEE----EESSESTTTHHHHHTS--------TT-SEEEESGGGGSTH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeEE----ECCcCCcccHHHHhcC--------CCCCEEEEchhhhccc
Confidence 46688899999998754 2 1112222344 7888888877777764 3689999999988875
No 216
>COG3596 Predicted GTPase [General function prediction only]
Probab=22.18 E-value=1.2e+02 Score=29.18 Aligned_cols=62 Identities=26% Similarity=0.372 Sum_probs=38.7
Q ss_pred CCCCEEEEEcC--CCChhhhhhhhhh-ccCCceecCCCCCccccCCccccc--cccceecCCCCcCcccc
Q 020142 78 HEKPLTLWLNG--GPGCSSVGGGAFT-ELGPFYPRGDGRGLRRNSMSWNKA--SNLLFVESPAGVGWSYS 142 (330)
Q Consensus 78 ~~~PlvlWlnG--GPG~SS~~~g~~~-E~GP~~~~~~~~~~~~n~~sW~~~--anllfiDqPvGtGfSy~ 142 (330)
+..|+.+.+-| |-|=||+--.+|. |.-|...-+ ....+-.+.|... -||..+|.| |+|=|..
T Consensus 36 ~~~pvnvLi~G~TG~GKSSliNALF~~~~~~v~~vg--~~t~~~~~~~~~~~~~~l~lwDtP-G~gdg~~ 102 (296)
T COG3596 36 EKEPVNVLLMGATGAGKSSLINALFQGEVKEVSKVG--VGTDITTRLRLSYDGENLVLWDTP-GLGDGKD 102 (296)
T ss_pred ccCceeEEEecCCCCcHHHHHHHHHhccCceeeecc--cCCCchhhHHhhccccceEEecCC-Ccccchh
Confidence 56799999999 7778898434552 233333211 1233334455543 689999999 8886643
No 217
>PF15169 DUF4564: Domain of unknown function (DUF4564)
Probab=21.96 E-value=80 Score=28.25 Aligned_cols=44 Identities=23% Similarity=0.329 Sum_probs=33.0
Q ss_pred ccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCC
Q 020142 125 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFP 171 (330)
Q Consensus 125 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp 171 (330)
..-+|+++ ..+|||+.-+++. ..+....++++...|.+|++.++
T Consensus 122 ~g~~v~L~--f~tG~siPLTqsa-~~G~~~dve~IA~~I~~FL~l~~ 165 (187)
T PF15169_consen 122 KGYLVVLR--FATGFSIPLTQSA-TLGDRSDVEAIAKLINKFLELNP 165 (187)
T ss_pred cceEEEEE--ccCCcceeccceE-EecCchHHHHHHHHHHHHHhhcc
Confidence 34456666 4679999877654 35567788899999999998875
No 218
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=21.89 E-value=1.2e+02 Score=27.72 Aligned_cols=60 Identities=20% Similarity=0.343 Sum_probs=39.1
Q ss_pred hhhHHHHHHHHHHHHHH--CCCCCCCCeEEEcccccccchHHHHHHHHHhcccCCCceeeeeEEEecCCCCCcc
Q 020142 153 ASTARDMHVFMMNWYEK--FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (330)
Q Consensus 153 ~~~a~d~~~fL~~f~~~--fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d~~ 224 (330)
.++|++....|++|+.. -+.-...-=.|.|-|--|- =+..|.+. -.+.|+.+|...+-|.
T Consensus 177 p~QaqEVh~~iR~wl~~~vs~~Va~~~RIiYGGSV~g~----N~~el~~~--------~diDGFLVGGaSLKpe 238 (247)
T KOG1643|consen 177 PEQAQEVHAEIRKWLKSNVSDAVASSTRIIYGGSVNGG----NCKELAKK--------PDIDGFLVGGASLKPE 238 (247)
T ss_pred HHHHHHHHHHHHHHHhhcchhhhhhceEEEeccccccc----cHHHhccc--------ccccceEEcCcccChH
Confidence 46789999999999976 3333333345655554333 34455443 2478999999887664
No 219
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=21.43 E-value=74 Score=22.72 Aligned_cols=13 Identities=46% Similarity=0.698 Sum_probs=10.0
Q ss_pred ceecCCCCcCcccc
Q 020142 129 LFVESPAGVGWSYS 142 (330)
Q Consensus 129 lfiDqPvGtGfSy~ 142 (330)
+-++-| |+|+||.
T Consensus 42 ~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 42 TTVGIP-GTGLSYR 54 (55)
T ss_pred EEEEcC-CCccEEe
Confidence 456767 9999985
No 220
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=21.14 E-value=1.2e+02 Score=30.44 Aligned_cols=100 Identities=26% Similarity=0.456 Sum_probs=54.0
Q ss_pred CCEEEEEcCCCChhhhhhhhhhccCCceecCCCCCccccCCccccccccceecCCCCcCcccccCCCCCCCCchhhHHHH
Q 020142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDM 159 (330)
Q Consensus 80 ~PlvlWlnGGPG~SS~~~g~~~E~GP~~~~~~~~~~~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~ 159 (330)
.| +|.++|=||.=-- |...=|..-+++... ..+.+ +..|+-=--| |.|||-.....+ .+..++|.-+
T Consensus 153 ~P-lLl~HGwPGsv~E----FykfIPlLT~p~~hg-~~~d~----~FEVI~PSlP-GygwSd~~sk~G--Fn~~a~Arvm 219 (469)
T KOG2565|consen 153 KP-LLLLHGWPGSVRE----FYKFIPLLTDPKRHG-NESDY----AFEVIAPSLP-GYGWSDAPSKTG--FNAAATARVM 219 (469)
T ss_pred cc-eEEecCCCchHHH----HHhhhhhhcCccccC-Cccce----eEEEeccCCC-CcccCcCCccCC--ccHHHHHHHH
Confidence 35 4568999994322 223334433322110 01111 2233332224 888886654433 4556666555
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEcccccccchHHHHHHHHH
Q 020142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 199 (330)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (330)
...+. ++.-+++||-|--||......+|+...+
T Consensus 220 rkLMl-------RLg~nkffiqGgDwGSiI~snlasLyPe 252 (469)
T KOG2565|consen 220 RKLML-------RLGYNKFFIQGGDWGSIIGSNLASLYPE 252 (469)
T ss_pred HHHHH-------HhCcceeEeecCchHHHHHHHHHhhcch
Confidence 54443 4455689998888888777777766554
No 221
>PRK11524 putative methyltransferase; Provisional
Probab=20.38 E-value=2.5e+02 Score=26.26 Aligned_cols=51 Identities=10% Similarity=0.379 Sum_probs=29.8
Q ss_pred ccccceecCCCCcCcccccCCCCCCCCchhhHHHHHHHHHHHHHHCCCCCC-C-CeEEE
Q 020142 125 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKS-R-ELFLT 181 (330)
Q Consensus 125 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~-~-~~yi~ 181 (330)
-.++++.|.|-++|.+|...... ...++...++..|+...-+..+ . .+||.
T Consensus 27 siDlIitDPPY~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~rvLK~~G~i~i~ 79 (284)
T PRK11524 27 SVDLIFADPPYNIGKNFDGLIEA------WKEDLFIDWLYEWIDECHRVLKKQGTMYIM 79 (284)
T ss_pred cccEEEECCCccccccccccccc------ccHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 47999999998887665432211 1123555667777755333322 2 36665
Done!