Query 020143
Match_columns 330
No_of_seqs 182 out of 1446
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 07:22:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020143.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020143hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 2E-107 4E-112 778.9 25.0 299 24-329 16-324 (324)
2 cd00693 secretory_peroxidase H 100.0 5E-100 1E-104 725.7 24.5 293 32-328 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 4.3E-73 9.3E-78 523.7 11.6 228 49-293 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 5.3E-70 1.1E-74 514.5 19.3 231 47-326 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 2.5E-67 5.5E-72 490.7 17.4 230 44-315 11-252 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 1.2E-65 2.7E-70 477.9 19.2 231 35-314 3-248 (250)
7 cd00692 ligninase Ligninase an 100.0 7E-65 1.5E-69 487.5 19.2 236 45-329 16-287 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 3.3E-64 7.2E-69 467.7 19.4 221 45-314 16-248 (251)
9 cd00314 plant_peroxidase_like 100.0 9.1E-60 2E-64 440.6 15.1 223 48-310 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 1.8E-57 4E-62 442.9 17.8 275 31-319 27-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 7.4E-55 1.6E-59 448.6 18.7 275 31-319 37-408 (716)
12 PRK15061 catalase/hydroperoxid 100.0 5.1E-51 1.1E-55 418.1 18.8 275 31-319 39-414 (726)
13 cd08201 plant_peroxidase_like_ 100.0 5.4E-51 1.2E-55 379.1 10.4 211 56-310 34-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 2.6E-39 5.6E-44 304.4 15.3 220 51-312 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 5.7E-34 1.2E-38 294.2 15.1 219 48-312 429-709 (716)
16 PRK15061 catalase/hydroperoxid 100.0 1.6E-33 3.5E-38 289.5 15.8 219 51-312 442-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 7.2E-30 1.6E-34 252.1 14.1 252 48-312 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.3 3.4E-11 7.3E-16 120.5 12.5 215 51-312 452-725 (730)
19 PTZ00411 transaldolase-like pr 68.7 23 0.0005 34.9 8.0 48 142-189 180-230 (333)
20 PF11895 DUF3415: Domain of un 46.3 17 0.00037 28.5 2.2 18 296-313 2-19 (80)
21 TIGR00874 talAB transaldolase. 46.0 69 0.0015 31.4 7.0 140 140-299 166-311 (317)
22 PRK12309 transaldolase/EF-hand 42.7 67 0.0015 32.4 6.5 49 141-190 173-225 (391)
23 cd00957 Transaldolase_TalAB Tr 41.9 21 0.00045 34.9 2.7 49 141-190 167-219 (313)
24 PRK12346 transaldolase A; Prov 41.0 38 0.00082 33.2 4.3 65 125-190 150-220 (316)
25 COG3763 Uncharacterized protei 36.2 64 0.0014 24.7 3.9 28 48-75 24-51 (71)
26 PF06163 DUF977: Bacterial pro 23.3 98 0.0021 26.4 3.3 32 298-329 71-103 (127)
27 KOG0400 40S ribosomal protein 22.0 64 0.0014 27.7 2.0 34 173-206 31-65 (151)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=1.9e-107 Score=778.93 Aligned_cols=299 Identities=32% Similarity=0.588 Sum_probs=281.2
Q ss_pred HhhhcCcCCCCcchhhccCchHHHHHHHHHHHHHHhcCCchhhHHHHHhcccCccCCCceeecccCCCCccccccccCCC
Q 020143 24 LQFYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFG 103 (330)
Q Consensus 24 ~~~~~~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GCDgSilld~~~~~~~E~~~~~N~~ 103 (330)
.....+.++|+++||++|||++|+||+++|++++.+||+++|++|||+||||||+||||||||+++ ..||++++|.+
T Consensus 16 ~~~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~ 92 (324)
T PLN03030 16 ATTLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLL 92 (324)
T ss_pred hcccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcC
Confidence 333355577999999999999999999999999999999999999999999999999999999864 47999999999
Q ss_pred CcchHHHHHHHHHHHhhCCCccchhhHHhhhcccchhhcCCCccccccCCCCCCCcchhhhhcCCCCCCCCHHHHHHHHH
Q 020143 104 MRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFN 183 (330)
Q Consensus 104 L~g~~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~ 183 (330)
|+||++|+.||++||++||++|||||||||||||||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+
T Consensus 93 l~Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~ 171 (324)
T PLN03030 93 LRGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFA 171 (324)
T ss_pred cchHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999877775 89999999999999999
Q ss_pred HCCCCcccceeeecccccccccccccccccc---C---CCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCCCCccC
Q 020143 184 SIGIDDEGVVALYGAHSVGRVHCVNLVHRLY---P---TVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILD 257 (330)
Q Consensus 184 ~~Gls~~dlVaLsGaHTiG~ahc~~f~~rl~---~---~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FD 257 (330)
++||+.+|||+||||||||++||.+|.+||| + .+||+||+.|++.|++.|| ..+...+. +++|+.||.+||
T Consensus 172 ~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp-~~~~~~~~--~~lD~~Tp~~FD 248 (324)
T PLN03030 172 AKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCP-QNGDGSRR--IALDTGSSNRFD 248 (324)
T ss_pred HcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCC-CCCCCCcc--ccCCCCCCcccc
Confidence 9999999999999999999999999999999 2 3699999999999999999 33333345 889999999999
Q ss_pred hHHHHHhhhccccchhhhhhccCCCCHHHHHHhhhCh----HHHHHHHHHHHHHHHhCCCCCCCCCcccccccccC
Q 020143 258 NNYYKNIINHKGLLIVDQQLASDPRTTPFVQKMAANN----SYFHEQFSRAIALLSENNPLTGDQGEVRKDCRYVN 329 (330)
Q Consensus 258 n~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeIR~~C~~~n 329 (330)
|+||+||++++|+|+|||+|+.|++|+++|++||.|+ +.|+++|++||+|||+|+|+||++|||||+|+++|
T Consensus 249 n~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 249 ASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred cHHHHHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 9999999999999999999999999999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=5e-100 Score=725.73 Aligned_cols=293 Identities=43% Similarity=0.747 Sum_probs=281.0
Q ss_pred CCCcchhhccCchHHHHHHHHHHHHHHhcCCchhhHHHHHhcccCccCCCceeecccCCCCccccccccCCCCcchHHHH
Q 020143 32 ELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVS 111 (330)
Q Consensus 32 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GCDgSilld~~~~~~~E~~~~~N~~L~g~~~Id 111 (330)
||+++||++|||++|+||+++|++.+.++++++|++|||+||||||+||||||||+++.++.+|+++++|.+|+||++|+
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l~g~~~i~ 80 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSLRGFDVID 80 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCcchhHHHH
Confidence 69999999999999999999999999999999999999999999999999999999887778999999999999999999
Q ss_pred HHHHHHHhhCCCccchhhHHhhhcccchhhcCCCccccccCCCCCCCcchhhhhcCCCCCCCCHHHHHHHHHHCCCCccc
Q 020143 112 TIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEG 191 (330)
Q Consensus 112 ~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d 191 (330)
.||++||+.||++||||||||||||+||+++|||.|+|++||+|+.+|.+..+ +.||+|+.+++++++.|+++||+++|
T Consensus 81 ~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~d 159 (298)
T cd00693 81 DIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVTD 159 (298)
T ss_pred HHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999999998877665 78999999999999999999999999
Q ss_pred ceeeeccccccccccccccccccC-----CCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCCCCccChHHHHHhhh
Q 020143 192 VVALYGAHSVGRVHCVNLVHRLYP-----TVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNIIN 266 (330)
Q Consensus 192 lVaLsGaHTiG~ahc~~f~~rl~~-----~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~ 266 (330)
||+|+||||||++||.+|.+|+|+ .+||+||+.|+..|++.|| ..+.+.++ +++|+.||.+|||+||++|+.
T Consensus 160 ~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp-~~~~~~~~--~~lD~~Tp~~FDn~Yy~~l~~ 236 (298)
T cd00693 160 LVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCP-AGGDDDTL--VPLDPGTPNTFDNSYYKNLLA 236 (298)
T ss_pred heeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCC-CCCCCCcc--ccCCCCCCCccccHHHHHHHh
Confidence 999999999999999999999983 4799999999999999999 33444556 899999999999999999999
Q ss_pred ccccchhhhhhccCCCCHHHHHHhhhChHHHHHHHHHHHHHHHhCCCCCCCCCccccccccc
Q 020143 267 HKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDCRYV 328 (330)
Q Consensus 267 ~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeIR~~C~~~ 328 (330)
++|+|+|||+|+.|++|+++|++||.||+.|+++|++||+||+++||+||.+||||++|+++
T Consensus 237 ~~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 237 GRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred cccCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=4.3e-73 Score=523.71 Aligned_cols=228 Identities=43% Similarity=0.744 Sum_probs=210.9
Q ss_pred HHHHHHHHHHhcCCchhhHHHHHhcccCc-cCCCceeecccCCCCccccccccCCCCc-chHHHHHHHHHHHhhCCCccc
Q 020143 49 IKQQVVQLYYKHGNTAVSWVRNLFHDCAV-KSCDASLLLETVTGVASEQASERSFGMR-NFKYVSTIKAALEAECPLKVS 126 (330)
Q Consensus 49 Vr~~v~~~~~~~~~~aa~llRL~FHDcfv-~GCDgSilld~~~~~~~E~~~~~N~~L~-g~~~Id~iK~~le~~cp~~VS 126 (330)
||++|++++..+++++|++|||+|||||+ +|||||||+. ..|+++++|.+|+ |+++|+.||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 89999999999999999999999999999 9999999983 5899999999999 999999999999999999999
Q ss_pred hhhHHhhhcccchhhcCCCccccccCCCCCCCcchhhhhcCCCCCCCCHHHHHHHHHHCCCCcccceeeecccccccccc
Q 020143 127 CADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHC 206 (330)
Q Consensus 127 cADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLsGaHTiG~ahc 206 (330)
|||||+||||+||+.+|||.|+|++||+|+++++..++ .+||.|..++++|++.|+++|||++||||||||||||++||
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c 154 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHC 154 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESG
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceeccccccccee
Confidence 99999999999999999999999999999999999877 78999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCCCCccChHHHHHhhhccccchhhhhhccCCCCHHH
Q 020143 207 VNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNIINHKGLLIVDQQLASDPRTTPF 286 (330)
Q Consensus 207 ~~f~~rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~glL~SD~~L~~d~~t~~~ 286 (330)
.+|. |+|..+||+||+.|+.. .|+ ++.+. . +++| ||.+|||+||+++++++|+|+|||+|+.|++|+++
T Consensus 155 ~~f~-rl~~~~dp~~d~~~~~~---~C~--~~~~~-~--~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~ 223 (230)
T PF00141_consen 155 SSFS-RLYFPPDPTMDPGYAGQ---NCN--SGGDN-G--VPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPI 223 (230)
T ss_dssp GCTG-GTSCSSGTTSTHHHHHH---SSS--TSGCT-C--EESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHH
T ss_pred cccc-cccccccccccccccee---ccC--CCccc-c--cccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHH
Confidence 9999 99977899999999988 894 23222 5 8898 99999999999999999999999999999999999
Q ss_pred HHHhhhC
Q 020143 287 VQKMAAN 293 (330)
Q Consensus 287 V~~yA~d 293 (330)
|++||+|
T Consensus 224 V~~yA~d 230 (230)
T PF00141_consen 224 VERYAQD 230 (230)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 9999986
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=5.3e-70 Score=514.48 Aligned_cols=231 Identities=25% Similarity=0.397 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHHhcCCchhhHHHHHhcccC-------ccCCCceeecccCCCCccccccccCCCCc-chHHHHHHHHHHH
Q 020143 47 EIIKQQVVQLYYKHGNTAVSWVRNLFHDCA-------VKSCDASLLLETVTGVASEQASERSFGMR-NFKYVSTIKAALE 118 (330)
Q Consensus 47 ~iVr~~v~~~~~~~~~~aa~llRL~FHDcf-------v~GCDgSilld~~~~~~~E~~~~~N~~L~-g~~~Id~iK~~le 118 (330)
+.+|++| ..+.++|.++|.+|||+||||| ++||||||+++ .|+++++|.+|+ ||++|+.||+++
T Consensus 15 ~~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~- 86 (289)
T PLN02608 15 EKARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH- 86 (289)
T ss_pred HHHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc-
Confidence 4566777 4467799999999999999999 89999999983 699999999995 999999999997
Q ss_pred hhCCCccchhhHHhhhcccchhhcCCCccccccCCCCCCCcchhhhhcCCCCCCCCHHHHHHHHHHCCCCcccceeeecc
Q 020143 119 AECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGA 198 (330)
Q Consensus 119 ~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLsGa 198 (330)
++||||||||||||+||+++|||.|+|++||+|+++++ ++++||+|+.+++++++.|+++|||++|||+|+||
T Consensus 87 ----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~---~~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGA 159 (289)
T PLN02608 87 ----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACP---EEGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGG 159 (289)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCC---ccCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhccc
Confidence 48999999999999999999999999999999999985 34689999999999999999999999999999999
Q ss_pred ccccccccccccccccCCCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCCCCccChHHHHHhhhc--ccc--chhh
Q 020143 199 HSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNIINH--KGL--LIVD 274 (330)
Q Consensus 199 HTiG~ahc~~f~~rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~--~gl--L~SD 274 (330)
||||++||. |+ + ..+.+ + .||.+|||+||++++.+ +|+ |+||
T Consensus 160 HTiG~ahc~----r~-g-----------------------~~g~~-----~-~Tp~~FDN~Yy~~ll~~~~~gll~L~SD 205 (289)
T PLN02608 160 HTLGRAHPE----RS-G-----------------------FDGPW-----T-KEPLKFDNSYFVELLKGESEGLLKLPTD 205 (289)
T ss_pred ccccccccc----CC-C-----------------------CCCCC-----C-CCCCccChHHHHHHHcCCcCCccccccC
Confidence 999999994 42 0 01112 2 68999999999999999 788 7999
Q ss_pred hhhccCCCCHHHHHHhhhChHHHHHHHHHHHHHHHhCCCCCCCCCccccccc
Q 020143 275 QQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDCR 326 (330)
Q Consensus 275 ~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeIR~~C~ 326 (330)
|+|+.|++|+++|++||.|++.|+++|++||+||+++||+||++||+.+.-+
T Consensus 206 ~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 206 KALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred HhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 9999999999999999999999999999999999999999999999987653
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=2.5e-67 Score=490.73 Aligned_cols=230 Identities=27% Similarity=0.412 Sum_probs=208.1
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhHHHHHhcccCccCCCceeeccc---CCCCccccccccCCCC-cchHHHHHHHHHHHh
Q 020143 44 KAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLET---VTGVASEQASERSFGM-RNFKYVSTIKAALEA 119 (330)
Q Consensus 44 ~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GCDgSilld~---~~~~~~E~~~~~N~~L-~g~~~Id~iK~~le~ 119 (330)
..++|||++|++.+. +++++|++|||+|||||+ ||+|+++++ +..+.+|+++++|.+| +||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 467899999999999 999999999999999994 888877743 2333579999999999 7999999999987
Q ss_pred hCCCccchhhHHhhhcccchhhcCCCccccccCCCCCCCcchhhhhcCCCCCCCCHHHHHHHHHHCCCCcccceeeeccc
Q 020143 120 ECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAH 199 (330)
Q Consensus 120 ~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLsGaH 199 (330)
++||||||||||||+||+.+|||.|+|++||+|+.++....++.+||.|+.++++|++.|+++|||++|||+|||||
T Consensus 86 ---~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGaH 162 (253)
T cd00691 86 ---PDISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGAH 162 (253)
T ss_pred ---CCCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhcccc
Confidence 48999999999999999999999999999999999998777788899999999999999999999999999999999
Q ss_pred cccccccccccccccCCCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCCCCccChHHHHHhhhccc--------cc
Q 020143 200 SVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNIINHKG--------LL 271 (330)
Q Consensus 200 TiG~ahc~~f~~rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~g--------lL 271 (330)
|||++||..+ . + .+ .+ ..||.+|||+||++|+.++| +|
T Consensus 163 TiG~a~c~~~--~-~----------------------~g---~~------~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L 208 (253)
T cd00691 163 TLGRCHKERS--G-Y----------------------DG---PW------TKNPLKFDNSYFKELLEEDWKLPTPGLLML 208 (253)
T ss_pred eeecccccCC--C-C----------------------CC---CC------CCCCCcccHHHHHHHhcCCCccCcCcceec
Confidence 9999999521 0 0 01 11 26999999999999999999 99
Q ss_pred hhhhhhccCCCCHHHHHHhhhChHHHHHHHHHHHHHHHhCCCCC
Q 020143 272 IVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLT 315 (330)
Q Consensus 272 ~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~t 315 (330)
+|||+|+.|++|+.+|++||.|++.|+++|++||+||+++||..
T Consensus 209 ~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 209 PTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred hhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999863
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=1.2e-65 Score=477.95 Aligned_cols=231 Identities=30% Similarity=0.458 Sum_probs=207.0
Q ss_pred cchhhc--cCchHHHHHHHHHHHHHHhcCCchhhHHHHHhc-----ccCcc--CCCceeecccCCCCccccccccCCCC-
Q 020143 35 FNYYAQ--SCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFH-----DCAVK--SCDASLLLETVTGVASEQASERSFGM- 104 (330)
Q Consensus 35 ~~fY~~--sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FH-----Dcfv~--GCDgSilld~~~~~~~E~~~~~N~~L- 104 (330)
-+||.. -|+.+++.+++.+++.+ .+++++|.+|||+|| ||+++ ||||||.. .+|+++++|.+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~ 75 (250)
T PLN02364 3 KNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIH 75 (250)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHH
Confidence 356663 48899999999999988 689999999999999 88876 99999944 479999999999
Q ss_pred cchHHHHHHHHHHHhhCCCccchhhHHhhhcccchhhcCCCccccccCCCCCCCcchhhhhcCCCCCCCCHHHHHHHHHH
Q 020143 105 RNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNS 184 (330)
Q Consensus 105 ~g~~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~ 184 (330)
+||++|+.||+++ ++||||||||||||+||+++|||.|+|++||+|+++++. +++||.|+.++++|++.|++
T Consensus 76 ~~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~ 147 (250)
T PLN02364 76 IALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAK 147 (250)
T ss_pred HHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHH
Confidence 6999999999998 589999999999999999999999999999999999864 46799999999999999997
Q ss_pred -CCCCcccceeeeccccccccccccccccccCCCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCCCCccChHHHHH
Q 020143 185 -IGIDDEGVVALYGAHSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKN 263 (330)
Q Consensus 185 -~Gls~~dlVaLsGaHTiG~ahc~~f~~rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDn~Yy~~ 263 (330)
+|||++|||||+||||||++||. |+ +..+.+ + .||.+|||+||++
T Consensus 148 ~~Gl~~~d~VaLsGaHTiG~~hc~----r~------------------------~~~g~~-----~-~tp~~fDn~Yy~~ 193 (250)
T PLN02364 148 QMGLSDKDIVALSGAHTLGRCHKD----RS------------------------GFEGAW-----T-SNPLIFDNSYFKE 193 (250)
T ss_pred hcCCCHHHheeeecceeeccccCC----CC------------------------CCCCCC-----C-CCCCccchHHHHH
Confidence 69999999999999999999992 32 001112 2 6899999999999
Q ss_pred hhhc--cccch--hhhhhccCCCCHHHHHHhhhChHHHHHHHHHHHHHHHhCCCC
Q 020143 264 IINH--KGLLI--VDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPL 314 (330)
Q Consensus 264 l~~~--~glL~--SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 314 (330)
|+.+ +|+|. |||+|+.|++|+.+|++||.|++.|+++|++||+||+++|+-
T Consensus 194 ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 194 LLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HhcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999 89865 999999999999999999999999999999999999999973
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=7e-65 Score=487.46 Aligned_cols=236 Identities=26% Similarity=0.348 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHHHHhcCC---chhhHHHHHhcccCc------------cCCCceeecccCCCCccccccccCCCCcchHH
Q 020143 45 AEEIIKQQVVQLYYKHGN---TAVSWVRNLFHDCAV------------KSCDASLLLETVTGVASEQASERSFGMRNFKY 109 (330)
Q Consensus 45 ~e~iVr~~v~~~~~~~~~---~aa~llRL~FHDcfv------------~GCDgSilld~~~~~~~E~~~~~N~~L~g~~~ 109 (330)
++..|+++|++.+..+.. .|+.+|||+|||||+ +||||||||+.+ .|+++++|.||+ ++
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~gL~--~v 89 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIGLD--EI 89 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCCHH--HH
Confidence 478999999999986544 577799999999997 899999999753 699999999998 99
Q ss_pred HHHHHHHHHhhCCCccchhhHHhhhcccchh-hcCCCccccccCCCCCCCcchhhhhcCCCCCCCCHHHHHHHHHHCCCC
Q 020143 110 VSTIKAALEAECPLKVSCADIVALSAREGIV-MLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGID 188 (330)
Q Consensus 110 Id~iK~~le~~cp~~VScADilalAar~AV~-~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls 188 (330)
|+.||..+|+.| ||||||||||||+||+ +.|||.|+|++||+|++++.. +++||.|+.++++|++.|+++|||
T Consensus 90 vd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~Gf~ 163 (328)
T cd00692 90 VEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAGFS 163 (328)
T ss_pred HHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCC
Confidence 999999999998 9999999999999999 569999999999999999863 468999999999999999999999
Q ss_pred cccceeeeccccccccccccccccccCCCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCCCCccChHHHHHhh-hc
Q 020143 189 DEGVVALYGAHSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNII-NH 267 (330)
Q Consensus 189 ~~dlVaLsGaHTiG~ahc~~f~~rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDn~Yy~~l~-~~ 267 (330)
.+|||+||||||||++|. .||+++ + +++| .||.+|||+||++++ ++
T Consensus 164 ~~E~VaLsGAHTiG~a~~----------~Dps~~---------------g-------~p~D-~TP~~FDn~Yf~~ll~~~ 210 (328)
T cd00692 164 PDELVALLAAHSVAAQDF----------VDPSIA---------------G-------TPFD-STPGVFDTQFFIETLLKG 210 (328)
T ss_pred HHHHhhhcccccccccCC----------CCCCCC---------------C-------CCCC-CCcchhcHHHHHHHHHcC
Confidence 999999999999999983 477663 1 4678 699999999999987 45
Q ss_pred cc-------------------cchhhhhhccCCCCHHHHHHhhhChHHHHHHHHHHHHHHHhCCCCCCCCCccccccccc
Q 020143 268 KG-------------------LLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPLTGDQGEVRKDCRYV 328 (330)
Q Consensus 268 ~g-------------------lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeIR~~C~~~ 328 (330)
++ +|+||++|+.|++|+.+|++||+||++|+++|++||+||+++||. ...+.+|+.|
T Consensus 211 ~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs~v 286 (328)
T cd00692 211 TAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDCSDV 286 (328)
T ss_pred CCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccCccc
Confidence 55 499999999999999999999999999999999999999999886 4478899988
Q ss_pred C
Q 020143 329 N 329 (330)
Q Consensus 329 n 329 (330)
+
T Consensus 287 ~ 287 (328)
T cd00692 287 I 287 (328)
T ss_pred C
Confidence 6
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=3.3e-64 Score=467.74 Aligned_cols=221 Identities=29% Similarity=0.435 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHHHHhcCCchhhHHHHHhcccCc-------cCCCceeecccCCCCccccccccCCCCc-chHHHHHHHHH
Q 020143 45 AEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAV-------KSCDASLLLETVTGVASEQASERSFGMR-NFKYVSTIKAA 116 (330)
Q Consensus 45 ~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GCDgSilld~~~~~~~E~~~~~N~~L~-g~~~Id~iK~~ 116 (330)
+.+-++..+.+.+ .+...+|.+|||+||||.+ |||||||++ ..|+++++|.||+ ++++|+.||++
T Consensus 16 ~~~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf------~~E~~~~~N~gL~~~~~~i~~iK~~ 88 (251)
T PLN02879 16 AVQRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRH------PQELAHDANNGLDIAVRLLDPIKEL 88 (251)
T ss_pred HHHHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecC------hhhccCCCcCChHHHHHHHHHHHHH
Confidence 3445677788776 4679999999999999975 899999976 3699999999999 99999999999
Q ss_pred HHhhCCCccchhhHHhhhcccchhhcCCCccccccCCCCCCCcchhhhhcCCCCCCCCHHHHHHHHHHCCCCcccceeee
Q 020143 117 LEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALY 196 (330)
Q Consensus 117 le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLs 196 (330)
+ ++||||||||||||+||+++|||.|+|++||+|+.++. ++++||+|+.++++|++.|+++|||++||||||
T Consensus 89 ~-----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~---~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALs 160 (251)
T PLN02879 89 F-----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPP---PEGRLPQATKGVDHLRDVFGRMGLNDKDIVALS 160 (251)
T ss_pred c-----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCC---cccCCCCCCCCHHHHHHHHHHcCCCHHHHeeee
Confidence 8 58999999999999999999999999999999999875 356899999999999999999999999999999
Q ss_pred ccccccccccccccccccCCCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCCCCccChHHHHHhhhc--ccc--ch
Q 020143 197 GAHSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNIINH--KGL--LI 272 (330)
Q Consensus 197 GaHTiG~ahc~~f~~rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~--~gl--L~ 272 (330)
||||||++||. |. +.++.+ | .||.+|||+||++|+.+ +|+ |+
T Consensus 161 GaHTiG~ah~~----r~------------------------g~~g~~-----d-~tp~~FDN~Yy~~ll~~~~~gll~L~ 206 (251)
T PLN02879 161 GGHTLGRCHKE----RS------------------------GFEGAW-----T-PNPLIFDNSYFKEILSGEKEGLLQLP 206 (251)
T ss_pred ccccccccccc----cc------------------------cCCCCC-----C-CCccceeHHHHHHHHcCCcCCCccch
Confidence 99999999994 21 111122 4 69999999999999999 888 68
Q ss_pred hhhhhccCCCCHHHHHHhhhChHHHHHHHHHHHHHHHhCCCC
Q 020143 273 VDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENNPL 314 (330)
Q Consensus 273 SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 314 (330)
||++|+.|++|+++|++||.||+.||++|++||+||++||+.
T Consensus 207 SD~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 207 TDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred hhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999999999999999999975
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=9.1e-60 Score=440.63 Aligned_cols=223 Identities=30% Similarity=0.453 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHhcCCchhhHHHHHhcccCcc--------CCCceeecccCCCCccccccccCCCC-cchHHHHHHHHHHH
Q 020143 48 IIKQQVVQLYYKHGNTAVSWVRNLFHDCAVK--------SCDASLLLETVTGVASEQASERSFGM-RNFKYVSTIKAALE 118 (330)
Q Consensus 48 iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~--------GCDgSilld~~~~~~~E~~~~~N~~L-~g~~~Id~iK~~le 118 (330)
.|++.|++.+.+++.+++++|||+|||||+. ||||||+++ +|+++++|.+| +++++|+.||+++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~------~e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE------PELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc------ccccCcccccHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999996 999999996 39999999996 79999999999999
Q ss_pred hhCCCccchhhHHhhhcccchhhc--CCCccccccCCCCCCCcc--hhhhhcCCCCCCCCHHHHHHHHHHCCCCccccee
Q 020143 119 AECPLKVSCADIVALSAREGIVML--GGPRIPIKTGRRDSRVSY--LAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVA 194 (330)
Q Consensus 119 ~~cp~~VScADilalAar~AV~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~dlVa 194 (330)
+ |++|||||||+|||++||+.+ |||.|+|++||+|+.++. ...+...+|.|..+++++++.|+++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 899999999999999999999 999999999999999764 3344567888888999999999999999999999
Q ss_pred ee-ccccc-cccccccccccccCCCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCCCCccChHHHHHhhhcc----
Q 020143 195 LY-GAHSV-GRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDNNYYKNIINHK---- 268 (330)
Q Consensus 195 Ls-GaHTi-G~ahc~~f~~rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~---- 268 (330)
|+ ||||| |++||..|..|+ |+ +|..||.+|||+||++++.++
T Consensus 154 L~~GaHti~G~~~~~~~~~~~-------------------~~-------------~~~~tp~~fDN~yy~~l~~~~~~~~ 201 (255)
T cd00314 154 LSAGAHTLGGKNHGDLLNYEG-------------------SG-------------LWTSTPFTFDNAYFKNLLDMNWEWR 201 (255)
T ss_pred hccCCeeccCcccCCCCCccc-------------------CC-------------CCCCCCCccchHHHHHHhcCCcccc
Confidence 99 99999 999998775542 21 234799999999999999998
Q ss_pred ------------ccchhhhhhccCCCCHHHHHHhhhChHHHHHHHHHHHHHHHh
Q 020143 269 ------------GLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSE 310 (330)
Q Consensus 269 ------------glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 310 (330)
++|+||++|+.|++|+.+|++||.|++.|+++|++||+||++
T Consensus 202 ~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 202 VGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred cCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999984
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.8e-57 Score=442.89 Aligned_cols=275 Identities=21% Similarity=0.281 Sum_probs=236.6
Q ss_pred CCCCcch-hhccCchH-HHHHHHHHHHHHHhc--------CCchhhHHHHHhcccCc-------cCCC-ceeecccCCCC
Q 020143 31 SELQFNY-YAQSCPKA-EEIIKQQVVQLYYKH--------GNTAVSWVRNLFHDCAV-------KSCD-ASLLLETVTGV 92 (330)
Q Consensus 31 ~~L~~~f-Y~~sCP~~-e~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GCD-gSilld~~~~~ 92 (330)
.++-.+| |.+.+-.. .+.|+++|++.+... ...+|.+|||+|||+.+ ||++ |+|.+
T Consensus 27 ~p~~~~~~~~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf------ 100 (409)
T cd00649 27 NPMGEDFNYAEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRF------ 100 (409)
T ss_pred CCCCCCCCHHHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCcccc------
Confidence 3455555 55555444 378999999999864 47999999999999997 8997 78877
Q ss_pred ccccccccCCCCc-chHHHHHHHHHHHhhCCCccchhhHHhhhcccchhhcCCCccccccCCCCCCCcchh---------
Q 020143 93 ASEQASERSFGMR-NFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLA--------- 162 (330)
Q Consensus 93 ~~E~~~~~N~~L~-g~~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~--------- 162 (330)
.+|++++.|.+|. +..+++.||+++. ..||+||+|+||+..|||.+|||.|++..||.|...+...
T Consensus 101 ~pe~~~~~N~gL~~a~~~L~pik~k~~----~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~ 176 (409)
T cd00649 101 APLNSWPDNVNLDKARRLLWPIKQKYG----NKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEW 176 (409)
T ss_pred ccccCcHhhhhHHHHHHHHHHHHHHcC----CCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhc
Confidence 4799999999996 8999999999983 4799999999999999999999999999999999764320
Q ss_pred --------------------------hhhc--CCCCCCCCHHHHHHHHHHCCCCcccceee-eccccccccccccccccc
Q 020143 163 --------------------------EVEK--FIPNHNDSIATALSVFNSIGIDDEGVVAL-YGAHSVGRVHCVNLVHRL 213 (330)
Q Consensus 163 --------------------------~~~~--~lP~p~~~~~~l~~~F~~~Gls~~dlVaL-sGaHTiG~ahc~~f~~rl 213 (330)
.+++ .||+|..++++|++.|++||||++||||| +||||||++||.+|.+||
T Consensus 177 ~~~~~~~~~~~l~~pl~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rl 256 (409)
T cd00649 177 LADKRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHV 256 (409)
T ss_pred ccccccccchhhccchhhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccC
Confidence 0122 69999999999999999999999999999 599999999999999998
Q ss_pred cCCCCCCCCHHHHHHhh--cCCCCCCCCCCccccccCC---CCCCCccChHHHHHhhh----------------------
Q 020143 214 YPTVDPTLDPVYAEYLK--GRCPTPDPDPDAVVYARND---RETPMILDNNYYKNIIN---------------------- 266 (330)
Q Consensus 214 ~~~~dp~~d~~~~~~L~--~~Cp~~~~~~~~~~~~~~D---~~tp~~FDn~Yy~~l~~---------------------- 266 (330)
. +||.+++.|++.|+ .+||...+.+..+ ..+| +.||.+|||+||++|++
T Consensus 257 g--~dP~~~~~~~~gLgw~~~Cp~g~g~~t~~--sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~ 332 (409)
T cd00649 257 G--PEPEAAPIEQQGLGWKNSYGTGKGKDTIT--SGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAG 332 (409)
T ss_pred C--CCCCcCHHHHHhhcccccCCCCCCCCCcc--ccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccc
Confidence 4 79999999999996 7999322333333 5677 47999999999999998
Q ss_pred --------------ccccchhhhhhccCCCCHHHHHHhhhChHHHHHHHHHHHHHH--HhCCCCCCCCC
Q 020143 267 --------------HKGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALL--SENNPLTGDQG 319 (330)
Q Consensus 267 --------------~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 319 (330)
++|||+||++|+.|++|+++|++||.|++.||++|++||+|| +.+||++-..|
T Consensus 333 ~~~~~d~~~~~~~~~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 333 ENTVPDAHDPSKKHAPMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred cccCCCccccccccCcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 568999999999999999999999999999999999999999 69999986655
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=7.4e-55 Score=448.60 Aligned_cols=275 Identities=21% Similarity=0.267 Sum_probs=233.3
Q ss_pred CCCCcch-hhccCchH-HHHHHHHHHHHHHhc--------CCchhhHHHHHhcccCc-------cCC-CceeecccCCCC
Q 020143 31 SELQFNY-YAQSCPKA-EEIIKQQVVQLYYKH--------GNTAVSWVRNLFHDCAV-------KSC-DASLLLETVTGV 92 (330)
Q Consensus 31 ~~L~~~f-Y~~sCP~~-e~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GC-DgSilld~~~~~ 92 (330)
..+-.+| |.+.+-+. .+.||++|++.+... ...+|.+|||+||++.+ ||| .|+|.+
T Consensus 37 ~p~~~~f~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf------ 110 (716)
T TIGR00198 37 NPMGEDFDYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRF------ 110 (716)
T ss_pred CCCCCCccHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceec------
Confidence 3455566 66655443 457999999999864 47999999999999997 888 478876
Q ss_pred ccccccccCCCCc-chHHHHHHHHHHHhhCCCccchhhHHhhhcccchhhcCCCccccccCCCCCCCcc-----------
Q 020143 93 ASEQASERSFGMR-NFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSY----------- 160 (330)
Q Consensus 93 ~~E~~~~~N~~L~-g~~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~----------- 160 (330)
.+|++++.|.+|. .+.+++.||++ ||++|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 111 ~P~~sw~~N~~Ldka~~lL~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~ 186 (716)
T TIGR00198 111 APLNSWPDNVNLDKARRLLWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEW 186 (716)
T ss_pred ccccCchhhhhHHHHHHHHHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccch
Confidence 4799999999996 88999988886 7889999999999999999999999999999999994321
Q ss_pred ----h-----------h----------hhhcCCCCCCCCHHHHHHHHHHCCCCcccceeee-cccccccccccccccccc
Q 020143 161 ----L-----------A----------EVEKFIPNHNDSIATALSVFNSIGIDDEGVVALY-GAHSVGRVHCVNLVHRLY 214 (330)
Q Consensus 161 ----~-----------~----------~~~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLs-GaHTiG~ahc~~f~~rl~ 214 (330)
. . +....+|+|..++++|++.|++||||++|||||+ ||||||++||.+|.+|+
T Consensus 187 l~~~~~~~~~l~~p~a~~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl- 265 (716)
T TIGR00198 187 LTSSREDRESLENPLAATEMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI- 265 (716)
T ss_pred hhccccccccccccchhhhccccccCcccccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC-
Confidence 0 0 1122699999999999999999999999999995 99999999999999998
Q ss_pred CCCCCCCCHHHHHHhhcCCCCCCCC--CCccccccCC---CCCCCccChHHHHHhhhc----------------------
Q 020143 215 PTVDPTLDPVYAEYLKGRCPTPDPD--PDAVVYARND---RETPMILDNNYYKNIINH---------------------- 267 (330)
Q Consensus 215 ~~~dp~~d~~~~~~L~~~Cp~~~~~--~~~~~~~~~D---~~tp~~FDn~Yy~~l~~~---------------------- 267 (330)
| +||++++.|++.|+.+||...|. +..+ +.+| +.||.+|||+||+||+..
T Consensus 266 g-~dP~~~~~~~~gLg~~c~~~~g~g~dt~~--sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~ 342 (716)
T TIGR00198 266 G-PDPEGAPIEEQGLGWHNQYGKGVGRDTMT--SGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEI 342 (716)
T ss_pred C-CCCCcCHHHHHHhcccCCCCCCCCCCccc--ccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccc
Confidence 4 89999999999999999853332 2223 5677 479999999999999975
Q ss_pred ------------cccchhhhhhccCCCCHHHHHHhhhChHHHHHHHHHHHHHHH--hCCCCCCCCC
Q 020143 268 ------------KGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLS--ENNPLTGDQG 319 (330)
Q Consensus 268 ------------~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~tg~~G 319 (330)
.++|+||++|..|++++++|++||.|++.|+++|++||+||+ .+|++.-..|
T Consensus 343 ~p~~~~~~~~~~~~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~y~g 408 (716)
T TIGR00198 343 IPDVEDPNKKHNPIMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSRYIG 408 (716)
T ss_pred cccccccccccccCccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhhhcC
Confidence 689999999999999999999999999999999999999999 5776654333
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=5.1e-51 Score=418.10 Aligned_cols=275 Identities=20% Similarity=0.284 Sum_probs=232.8
Q ss_pred CCCCcch-hhccCchH-HHHHHHHHHHHHHhc--------CCchhhHHHHHhcccCc-------cCCC-ceeecccCCCC
Q 020143 31 SELQFNY-YAQSCPKA-EEIIKQQVVQLYYKH--------GNTAVSWVRNLFHDCAV-------KSCD-ASLLLETVTGV 92 (330)
Q Consensus 31 ~~L~~~f-Y~~sCP~~-e~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GCD-gSilld~~~~~ 92 (330)
..+-.+| |.+.+-.. .+.||++|.+.+... ...+|.+|||+||++.+ |||+ |+|.+
T Consensus 39 ~p~~~~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf------ 112 (726)
T PRK15061 39 NPMGEDFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRF------ 112 (726)
T ss_pred CCCCCCCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccC------
Confidence 3455566 66655444 467999999999864 47999999999999997 8996 78876
Q ss_pred ccccccccCCCCc-chHHHHHHHHHHHhhCCCccchhhHHhhhcccchhhcCCCccccccCCCCCCCcchh---------
Q 020143 93 ASEQASERSFGMR-NFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLA--------- 162 (330)
Q Consensus 93 ~~E~~~~~N~~L~-g~~~Id~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~--------- 162 (330)
.+|++++.|.+|. +..+++.||+++. ..||+||+|+||+..|||.+|||.|++..||.|...+...
T Consensus 113 ~pe~~w~~N~gL~ka~~~L~pik~ky~----~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~ 188 (726)
T PRK15061 113 APLNSWPDNVNLDKARRLLWPIKQKYG----NKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEW 188 (726)
T ss_pred cccccchhhhhHHHHHHHHHHHHHHhC----CCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccc
Confidence 4799999999996 8999999999983 5799999999999999999999999999999998654321
Q ss_pred -----------------------------hhhcCCCCCCCCHHHHHHHHHHCCCCcccceeee-cccccccccccccccc
Q 020143 163 -----------------------------EVEKFIPNHNDSIATALSVFNSIGIDDEGVVALY-GAHSVGRVHCVNLVHR 212 (330)
Q Consensus 163 -----------------------------~~~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLs-GaHTiG~ahc~~f~~r 212 (330)
+-...+|+|..++.+|++.|++||||++|||||+ ||||||++||..|.+|
T Consensus 189 l~~~~r~~~~~~l~~pl~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~r 268 (726)
T PRK15061 189 LGGDERYSGERDLENPLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASH 268 (726)
T ss_pred cccccccccccccccchhhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCcccc
Confidence 0012379999999999999999999999999995 9999999999999999
Q ss_pred ccCCCCCCCCHHHHHHhh--cCCCCCCCCCCccccccCC---CCCCCccChHHHHHhhhc--------------------
Q 020143 213 LYPTVDPTLDPVYAEYLK--GRCPTPDPDPDAVVYARND---RETPMILDNNYYKNIINH-------------------- 267 (330)
Q Consensus 213 l~~~~dp~~d~~~~~~L~--~~Cp~~~~~~~~~~~~~~D---~~tp~~FDn~Yy~~l~~~-------------------- 267 (330)
+ | +||.+++.+++.|. +.||...+.+..+ ..+| ..||.+|||+||++|+.+
T Consensus 269 l-g-pdP~~a~~~~qgLgw~~~c~~g~g~dt~t--sGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~ 344 (726)
T PRK15061 269 V-G-PEPEAAPIEEQGLGWKNSYGSGKGADTIT--SGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGA 344 (726)
T ss_pred c-C-CCCCcCHHHHHhccccccCCCCCCCCCcc--ccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCcc
Confidence 8 4 89999999999985 8999322333333 5677 479999999999999985
Q ss_pred ----------------cccchhhhhhccCCCCHHHHHHhhhChHHHHHHHHHHHHHH--HhCCCCCCCCC
Q 020143 268 ----------------KGLLIVDQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALL--SENNPLTGDQG 319 (330)
Q Consensus 268 ----------------~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 319 (330)
.+||+||++|..||+++++|++||.|+++|+++|++||+|| ..+|+++-..|
T Consensus 345 ~~~~~pd~~~~~~~~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 345 AEDTVPDAHDPSKKHAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred ccccCCcccccccccCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 58999999999999999999999999999999999999999 45777665444
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=5.4e-51 Score=379.14 Aligned_cols=211 Identities=22% Similarity=0.327 Sum_probs=178.5
Q ss_pred HHHhcCCchhhHHHHHhcccC-------ccCCCceeecccCCCCccccc-cccCCCCcchHHHHHHHHHHHhhCCCccch
Q 020143 56 LYYKHGNTAVSWVRNLFHDCA-------VKSCDASLLLETVTGVASEQA-SERSFGMRNFKYVSTIKAALEAECPLKVSC 127 (330)
Q Consensus 56 ~~~~~~~~aa~llRL~FHDcf-------v~GCDgSilld~~~~~~~E~~-~~~N~~L~g~~~Id~iK~~le~~cp~~VSc 127 (330)
+...++.++|++|||+||||| ++||||||+++.. .+|+. .+.|.+|++|+.|+.+ +|||
T Consensus 34 ~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~~l~~~~~i~~~----------~VSc 100 (264)
T cd08201 34 APGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNTTLNFFVNFYSP----------RSSM 100 (264)
T ss_pred CcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhhccccceeeccC----------ccCH
Confidence 444789999999999999999 8999999999742 46877 5667788898887653 6999
Q ss_pred hhHHhhhcccchhhcCCCccccccCCCCCCCcchhhhhcCCCCCCCCHHHHHHHHHHCCCCcccceeeec-ccccccccc
Q 020143 128 ADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYG-AHSVGRVHC 206 (330)
Q Consensus 128 ADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLsG-aHTiG~ahc 206 (330)
|||||||||+||+.+|||.|+|++||+|++++... .||.|+.++++|++.|++|||+++|||+||| |||||++||
T Consensus 101 ADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG~ahc 176 (264)
T cd08201 101 ADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLGGVHS 176 (264)
T ss_pred HHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeeeeeccc
Confidence 99999999999999999999999999999988643 4999999999999999999999999999996 999999999
Q ss_pred ccccccccCCCCCCCCHHHHHHhhcCCCCCCCCC-CccccccCCCCCCCccChHHHHHhhhccc----------cchhhh
Q 020143 207 VNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDP-DAVVYARNDRETPMILDNNYYKNIINHKG----------LLIVDQ 275 (330)
Q Consensus 207 ~~f~~rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~-~~~~~~~~D~~tp~~FDn~Yy~~l~~~~g----------lL~SD~ 275 (330)
..|.++. +| +.. +.. .++| .||.+|||+||.+++.+.. -+.||.
T Consensus 177 ~~f~~~~----~~------------------g~~~~~~--~p~d-stp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~sd~ 231 (264)
T cd08201 177 EDFPEIV----PP------------------GSVPDTV--LQFF-DTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNSDL 231 (264)
T ss_pred ccchhhc----CC------------------ccccCCC--CCCC-CCccccchHHHHHHhcCCCCCceeecCCCCccchh
Confidence 9886664 11 111 012 4677 7999999999999998742 368999
Q ss_pred hhccCCCCHHHHHHhhhChHHHHHHHHHHHHHHHh
Q 020143 276 QLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSE 310 (330)
Q Consensus 276 ~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 310 (330)
.++....... ++..| ++..|.+..+..+.||.+
T Consensus 232 r~f~~d~n~t-~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 232 RIFSSDGNVT-MNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred hheecCccHH-HHHhc-ChHHHHHHHHHHHHHHhC
Confidence 9998766655 56677 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=2.6e-39 Score=304.43 Aligned_cols=220 Identities=15% Similarity=0.215 Sum_probs=180.5
Q ss_pred HHHHHHHHhcCCchhhHHHHHhcccCc-------cCCCce-eecccCCCCccccccccCCC--Cc-chHHHHHHHHHHHh
Q 020143 51 QQVVQLYYKHGNTAVSWVRNLFHDCAV-------KSCDAS-LLLETVTGVASEQASERSFG--MR-NFKYVSTIKAALEA 119 (330)
Q Consensus 51 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GCDgS-illd~~~~~~~E~~~~~N~~--L~-g~~~Id~iK~~le~ 119 (330)
+.+++.+......++.||||+||++.+ |||+|+ |.| .+|++++.|.+ |. .+.+++.||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl------~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL------APQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC------ccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 567777777888999999999999997 899999 766 47999999998 86 88999999999852
Q ss_pred hC-CC-ccchhhHHhhhcccchhhcCC-----CccccccCCCCCCCcchhhh--hcCCCCCC------------CCHHHH
Q 020143 120 EC-PL-KVSCADIVALSAREGIVMLGG-----PRIPIKTGRRDSRVSYLAEV--EKFIPNHN------------DSIATA 178 (330)
Q Consensus 120 ~c-p~-~VScADilalAar~AV~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 178 (330)
.- ++ .||+||+|+||+..|||.+|| |.+++..||.|......... ...+|.+. ...+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 21 12 699999999999999999999 99999999999987532210 11345332 245789
Q ss_pred HHHHHHCCCCcccceeeeccc-cccccccccccccccCCCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCCCCccC
Q 020143 179 LSVFNSIGIDDEGVVALYGAH-SVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILD 257 (330)
Q Consensus 179 ~~~F~~~Gls~~dlVaLsGaH-TiG~ahc~~f~~rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FD 257 (330)
++.|.++|||++|||||+||| ++|..|..+ +. +.| ..+|.+||
T Consensus 171 rd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s-----------------------------~~-G~w------T~~p~~f~ 214 (297)
T cd08200 171 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGS-----------------------------KH-GVF------TDRPGVLT 214 (297)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCC-----------------------------CC-CCC------cCCCCccc
Confidence 999999999999999999997 699887421 11 123 26899999
Q ss_pred hHHHHHhhhcc--------------------c-----cchhhhhhccCCCCHHHHHHhhhC--hHHHHHHHHHHHHHHHh
Q 020143 258 NNYYKNIINHK--------------------G-----LLIVDQQLASDPRTTPFVQKMAAN--NSYFHEQFSRAIALLSE 310 (330)
Q Consensus 258 n~Yy~~l~~~~--------------------g-----lL~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~ 310 (330)
|.||++|+... | .+.+|.+|.+|++.|++|+.||.| ++.||+||++||.||++
T Consensus 215 N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klme 294 (297)
T cd08200 215 NDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMN 294 (297)
T ss_pred cHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHh
Confidence 99999999520 1 268899999999999999999998 99999999999999998
Q ss_pred CC
Q 020143 311 NN 312 (330)
Q Consensus 311 lg 312 (330)
+.
T Consensus 295 ld 296 (297)
T cd08200 295 LD 296 (297)
T ss_pred cC
Confidence 73
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=5.7e-34 Score=294.19 Aligned_cols=219 Identities=16% Similarity=0.253 Sum_probs=177.4
Q ss_pred HHHHHHHHH---HHhcCCchhhHHHHHhcccCc-------cCCCce-eecccCCCCccccccccC--CCCc-chHHHHHH
Q 020143 48 IIKQQVVQL---YYKHGNTAVSWVRNLFHDCAV-------KSCDAS-LLLETVTGVASEQASERS--FGMR-NFKYVSTI 113 (330)
Q Consensus 48 iVr~~v~~~---~~~~~~~aa~llRL~FHDcfv-------~GCDgS-illd~~~~~~~E~~~~~N--~~L~-g~~~Id~i 113 (330)
+|+++|... +.......+.|||++||++.+ ||++|+ |.| .+|++++.| .+|. .+++++.|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl------~pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRL------EPQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeec------chhcCcccCCHHHHHHHHHHHHHH
Confidence 446665553 455677899999999999997 899999 777 479999999 7886 88999999
Q ss_pred HHHHHhhCCCccchhhHHhhhcccchhhc---CCC--ccccccCCCCCCCcchhhhhcCCC-----C----------CCC
Q 020143 114 KAALEAECPLKVSCADIVALSAREGIVML---GGP--RIPIKTGRRDSRVSYLAEVEKFIP-----N----------HND 173 (330)
Q Consensus 114 K~~le~~cp~~VScADilalAar~AV~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP-----~----------p~~ 173 (330)
|+++.. ..||.||+|+||+..|||.+ ||| .+++..||.|.+.... +++...| + ...
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCC
Confidence 999852 27999999999999999998 898 5799999999987642 2222222 1 122
Q ss_pred CHHHHHHHHHHCCCCcccceeeecc-ccccccccccccccccCCCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCC
Q 020143 174 SIATALSVFNSIGIDDEGVVALYGA-HSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRET 252 (330)
Q Consensus 174 ~~~~l~~~F~~~Gls~~dlVaLsGa-HTiG~ahc~~f~~rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~t 252 (330)
....|++.|.++|||++|||||+|| |++|+.|..++ .+.+ ..+
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~------------------------------~G~~------T~~ 622 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGSK------------------------------HGVF------TDR 622 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheecchhhccccCCCCC------------------------------CCCC------cCC
Confidence 4567899999999999999999998 59999985321 1222 268
Q ss_pred CCccChHHHHHhhhcc--------------------c---c--chhhhhhccCCCCHHHHHHhhhCh--HHHHHHHHHHH
Q 020143 253 PMILDNNYYKNIINHK--------------------G---L--LIVDQQLASDPRTTPFVQKMAANN--SYFHEQFSRAI 305 (330)
Q Consensus 253 p~~FDn~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~d~--~~F~~~Fa~Am 305 (330)
|.+|||.||++|+... | + ..+|..|.+|++.|++|+.||.|+ +.||+||++||
T Consensus 623 p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw 702 (716)
T TIGR00198 623 VGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAW 702 (716)
T ss_pred CCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 9999999999998621 2 2 278999999999999999999997 89999999999
Q ss_pred HHHHhCC
Q 020143 306 ALLSENN 312 (330)
Q Consensus 306 ~Km~~lg 312 (330)
.|+.+++
T Consensus 703 ~Klm~ld 709 (716)
T TIGR00198 703 TKVMNLD 709 (716)
T ss_pred HHHHhCC
Confidence 9999986
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.6e-33 Score=289.45 Aligned_cols=219 Identities=16% Similarity=0.256 Sum_probs=180.6
Q ss_pred HHHHHHHHhcCCchhhHHHHHhcccCc-------cCCCce-eecccCCCCccccccccCC--CCc-chHHHHHHHHHHHh
Q 020143 51 QQVVQLYYKHGNTAVSWVRNLFHDCAV-------KSCDAS-LLLETVTGVASEQASERSF--GMR-NFKYVSTIKAALEA 119 (330)
Q Consensus 51 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GCDgS-illd~~~~~~~E~~~~~N~--~L~-g~~~Id~iK~~le~ 119 (330)
..+++.+....-..+.|||++||++.+ ||++|+ |.|. +|++++.|. +|. .+++++.||++.+.
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 567777777788899999999999997 899999 8774 799999999 886 88999999999964
Q ss_pred hCC--CccchhhHHhhhcccchhhc---CC--CccccccCCCCCCCcchhhhh---cCCCCCC------------CCHHH
Q 020143 120 ECP--LKVSCADIVALSAREGIVML---GG--PRIPIKTGRRDSRVSYLAEVE---KFIPNHN------------DSIAT 177 (330)
Q Consensus 120 ~cp--~~VScADilalAar~AV~~~---GG--P~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~~~~ 177 (330)
.-. ..||.||+|+||+..|||.+ || |.+++..||.|.+.... +++ ..+|... ...+.
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~t-d~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQT-DVESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCC-CcccccccCCCCccccccccccCCCCHHHH
Confidence 321 36999999999999999998 68 99999999999987532 222 2456532 23478
Q ss_pred HHHHHHHCCCCcccceeeeccc-cccccccccccccccCCCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCCCCcc
Q 020143 178 ALSVFNSIGIDDEGVVALYGAH-SVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMIL 256 (330)
Q Consensus 178 l~~~F~~~Gls~~dlVaLsGaH-TiG~ahc~~f~~rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~F 256 (330)
|++.|.++|||++|||||+||| ++|..|-.+ + .+.+ ..+|.+|
T Consensus 595 L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S-----------------------------~-~G~~------T~~p~~f 638 (726)
T PRK15061 595 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGS-----------------------------K-HGVF------TDRPGVL 638 (726)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCC-----------------------------C-CCCC------cCCCCcc
Confidence 9999999999999999999997 788887421 1 1122 2689999
Q ss_pred ChHHHHHhhhcc--------------------c---c--chhhhhhccCCCCHHHHHHhhhC--hHHHHHHHHHHHHHHH
Q 020143 257 DNNYYKNIINHK--------------------G---L--LIVDQQLASDPRTTPFVQKMAAN--NSYFHEQFSRAIALLS 309 (330)
Q Consensus 257 Dn~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~ 309 (330)
||.||+||+... | + +.+|..|.+|++.|++|+.||.| ++.||+||++||.|++
T Consensus 639 sNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvm 718 (726)
T PRK15061 639 TNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVM 718 (726)
T ss_pred ccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 999999999520 1 1 47899999999999999999999 9999999999999999
Q ss_pred hCC
Q 020143 310 ENN 312 (330)
Q Consensus 310 ~lg 312 (330)
+++
T Consensus 719 eld 721 (726)
T PRK15061 719 NLD 721 (726)
T ss_pred hCC
Confidence 986
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.96 E-value=7.2e-30 Score=252.14 Aligned_cols=252 Identities=18% Similarity=0.258 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHhc--------CCchhhHHHHHhcccCc-------cCCCceeecccCCCCccccccccCCCCc-chHHHH
Q 020143 48 IIKQQVVQLYYKH--------GNTAVSWVRNLFHDCAV-------KSCDASLLLETVTGVASEQASERSFGMR-NFKYVS 111 (330)
Q Consensus 48 iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GCDgSilld~~~~~~~E~~~~~N~~L~-g~~~Id 111 (330)
.|+..+...+... ...+|.+|||+||-+.+ +|..+. ..++.++.++|.|.+|+ ++.++.
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G-----~qRFaPlnSWPDN~nLDKarRLLW 145 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGG-----QQRFAPLNSWPDNANLDKARRLLW 145 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCC-----ceecccccCCCcccchHHHHHHhh
Confidence 5666777766654 35799999999999987 444332 23456899999999997 999999
Q ss_pred HHHHHHHhhCCCccchhhHHhhhcccchhhcCCCccccccCCCCCCCcch------------------------------
Q 020143 112 TIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYL------------------------------ 161 (330)
Q Consensus 112 ~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GR~D~~~s~~------------------------------ 161 (330)
.||+++. ..+|+||++.||+..|++.+|++.+.+..||.|--.+..
T Consensus 146 PIKkKYG----~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaavq 221 (730)
T COG0376 146 PIKKKYG----RKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQ 221 (730)
T ss_pred hHhHhhc----ccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhhe
Confidence 9999983 589999999999999999999999999999999877654
Q ss_pred --------hhhhcCCCCCCCCHHHHHHHHHHCCCCcccceeeec-cccccccccccccccccCCCCCCCCHHHHHHhh--
Q 020143 162 --------AEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYG-AHSVGRVHCVNLVHRLYPTVDPTLDPVYAEYLK-- 230 (330)
Q Consensus 162 --------~~~~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLsG-aHTiG~ahc~~f~~rl~~~~dp~~d~~~~~~L~-- 230 (330)
.. .+..|+|..+..+++..|++|+|+++|.|||++ |||+|++|-..-.+-+ | ++|.-.+--.+-|-
T Consensus 222 MGLIYVNPEG-png~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v-g-~ePe~a~ie~qGlGW~ 298 (730)
T COG0376 222 MGLIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV-G-PEPEAAPIEQQGLGWA 298 (730)
T ss_pred eeeEEeCCCC-CCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc-C-CCccccchhhhccccc
Confidence 12 235899999999999999999999999999976 9999999976422222 2 56654444444443
Q ss_pred cCCCCCCCCCCcc--ccccCCCCCCCccChHHHHHhhhcc-----------------------------------ccchh
Q 020143 231 GRCPTPDPDPDAV--VYARNDRETPMILDNNYYKNIINHK-----------------------------------GLLIV 273 (330)
Q Consensus 231 ~~Cp~~~~~~~~~--~~~~~D~~tp~~FDn~Yy~~l~~~~-----------------------------------glL~S 273 (330)
.+|....|.+..+ ..+.+. .||++|||+||.+|.... .||++
T Consensus 299 ~~~g~G~G~dtitsGlE~~Wt-~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~Mltt 377 (730)
T COG0376 299 NTYGSGKGPDTITSGLEGAWT-TTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTT 377 (730)
T ss_pred cccCCCcCcccccccccccCC-CCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeecc
Confidence 3444212221111 023333 689999999999998651 48999
Q ss_pred hhhhccCCCCHHHHHHhhhChHHHHHHHHHHHHHHHhCC
Q 020143 274 DQQLASDPRTTPFVQKMAANNSYFHEQFSRAIALLSENN 312 (330)
Q Consensus 274 D~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 312 (330)
|.+|.-||..+++.++|.+|++.|.+.|++||.||..-.
T Consensus 378 DlaLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 378 DLALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred chhhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999998643
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.27 E-value=3.4e-11 Score=120.51 Aligned_cols=215 Identities=15% Similarity=0.223 Sum_probs=151.3
Q ss_pred HHHHHHHHhcCCchhhHHHHHhcccCc-------cCCCce-eecccCCCCccccccccCC--CCc-chHHHHHHHHHHHh
Q 020143 51 QQVVQLYYKHGNTAVSWVRNLFHDCAV-------KSCDAS-LLLETVTGVASEQASERSF--GMR-NFKYVSTIKAALEA 119 (330)
Q Consensus 51 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GCDgS-illd~~~~~~~E~~~~~N~--~L~-g~~~Id~iK~~le~ 119 (330)
..++..+....-....|+-.+|-.+-+ +|.+|. |.|. +.++++.|. -|. -+.+++.|.+..+
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 456777777888899999999998876 788887 5563 688999997 343 6788888888876
Q ss_pred hCCCccchhhHHhhhcccchhhc---CCCc--cccccCCCCCCCcchhhhhc-CCCCC--------------CCCHHHHH
Q 020143 120 ECPLKVSCADIVALSAREGIVML---GGPR--IPIKTGRRDSRVSYLAEVEK-FIPNH--------------NDSIATAL 179 (330)
Q Consensus 120 ~cp~~VScADilalAar~AV~~~---GGP~--~~v~~GR~D~~~s~~~~~~~-~lP~p--------------~~~~~~l~ 179 (330)
..||.||+|+|++..||+.+ .|-. +|+..||.|+...... ++. ..=.| ...-.-|+
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtD-v~sf~~LeP~aDGfRNy~~~~~~~~pe~~Lv 600 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTD-VESFAVLEPIADGFRNYVKKDYVLTPEELLV 600 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcc-hhhhhcccccchhhhhhccCCCcCCHHHHHH
Confidence 47999999999999999874 5654 5778999999765322 111 11111 12234577
Q ss_pred HHHHHCCCCcccceeeeccc-cccccccccccccccCCCCCCCCHHHHHHhhcCCCCCCCCCCccccccCCCCCCCccCh
Q 020143 180 SVFNSIGIDDEGVVALYGAH-SVGRVHCVNLVHRLYPTVDPTLDPVYAEYLKGRCPTPDPDPDAVVYARNDRETPMILDN 258 (330)
Q Consensus 180 ~~F~~~Gls~~dlVaLsGaH-TiG~ahc~~f~~rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDn 258 (330)
+.=+-.+||.-||++|.||- -+|.-+. + .... |.- ..|..+.|
T Consensus 601 DkAqlL~LtapemtVLiGGlRvLg~n~g-------------------------------~-s~~G--VfT--~~pg~Ltn 644 (730)
T COG0376 601 DKAQLLTLTAPEMTVLIGGLRVLGANYG-------------------------------G-SKHG--VFT--DRPGVLTN 644 (730)
T ss_pred HHHHHhccCCccceEEEcceEeeccCCC-------------------------------C-Cccc--eec--cCcccccc
Confidence 77778899999999999973 2222211 0 0001 211 35666667
Q ss_pred HHHHHhhhcc--------------------cc-----chhhhhhccCCCCHHHHHHhhhC--hHHHHHHHHHHHHHHHhC
Q 020143 259 NYYKNIINHK--------------------GL-----LIVDQQLASDPRTTPFVQKMAAN--NSYFHEQFSRAIALLSEN 311 (330)
Q Consensus 259 ~Yy~~l~~~~--------------------gl-----L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~l 311 (330)
.||.||+.-. |- -..|..+-+++..|.+.+-||.+ ++.|.+||+.||.|..++
T Consensus 645 dFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~ 724 (730)
T COG0376 645 DFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNL 724 (730)
T ss_pred hhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhcc
Confidence 7777766431 21 24566666778889999999975 889999999999999876
Q ss_pred C
Q 020143 312 N 312 (330)
Q Consensus 312 g 312 (330)
.
T Consensus 725 D 725 (730)
T COG0376 725 D 725 (730)
T ss_pred c
Confidence 4
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=68.73 E-value=23 Score=34.89 Aligned_cols=48 Identities=15% Similarity=0.131 Sum_probs=28.7
Q ss_pred cCCCccccccCCCCCCCcchhhhhcCCCCC---CCCHHHHHHHHHHCCCCc
Q 020143 142 LGGPRIPIKTGRRDSRVSYLAEVEKFIPNH---NDSIATALSVFNSIGIDD 189 (330)
Q Consensus 142 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p---~~~~~~l~~~F~~~Gls~ 189 (330)
+|-..+..+.||-+...-.........+.. -..+.++.+.|++.|+..
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T 230 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKT 230 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCe
Confidence 477788999999865432111111111211 235778888889989864
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=46.32 E-value=17 Score=28.46 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHhCCC
Q 020143 296 YFHEQFSRAIALLSENNP 313 (330)
Q Consensus 296 ~F~~~Fa~Am~Km~~lgv 313 (330)
....+|..||.||+.+|.
T Consensus 2 ~m~~~F~~am~KlavLG~ 19 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGH 19 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS
T ss_pred hHHHHHHHHHHHHHHhcC
Confidence 356799999999999975
No 21
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=45.99 E-value=69 Score=31.38 Aligned_cols=140 Identities=18% Similarity=0.220 Sum_probs=66.3
Q ss_pred hhcCCCccccccCCCCCCCcchhhhhc---CCCCCCCCHHHHHHHHHHCCCCcccceeeeccccccccccccccccccCC
Q 020143 140 VMLGGPRIPIKTGRRDSRVSYLAEVEK---FIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCVNLVHRLYPT 216 (330)
Q Consensus 140 ~~~GGP~~~v~~GR~D~~~s~~~~~~~---~lP~p~~~~~~l~~~F~~~Gls~~dlVaLsGaHTiG~ahc~~f~~rl~~~ 216 (330)
..+|-..+..+.||-|-..-....... ..-++-..+.++.+.|++.|+..+=|.|=. .+++.... +-|
T Consensus 166 a~AGa~~ISPFVgRi~dw~~~~~g~~~~~~~~d~Gv~~v~~i~~~~k~~g~~T~Im~ASf--Rn~~qv~~------laG- 236 (317)
T TIGR00874 166 AEAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYYKKHGYPTEVMGASF--RNKEEILA------LAG- 236 (317)
T ss_pred HHcCCCEEEeecchHhHhhhhccCccccccccCchHHHHHHHHHHHHHcCCCcEEEeecc--CCHHHHHH------HHC-
Confidence 345888899999998663221110000 011233467888889999998754332210 11111110 101
Q ss_pred CC-CCCCHHHHHHhhcCC-CCCCC-CCCccccccCCCCCCCccChHHHHHhhhccccchhhhhhccCCCCHHHHHHhhhC
Q 020143 217 VD-PTLDPVYAEYLKGRC-PTPDP-DPDAVVYARNDRETPMILDNNYYKNIINHKGLLIVDQQLASDPRTTPFVQKMAAN 293 (330)
Q Consensus 217 ~d-p~~d~~~~~~L~~~C-p~~~~-~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~yA~d 293 (330)
.| -++.|...++|...- |.... .+... ...+ ..|..+|...|+...+..++=. .....-++.|+.|
T Consensus 237 ~d~~Ti~p~ll~~L~~~~~~~~~~l~~~~~--~~~~-~~~~~~~e~~fr~~~~~d~ma~--------ekl~~gir~F~~d 305 (317)
T TIGR00874 237 CDRLTISPALLDELKESTGPVERKLDPESA--KKVD-KQPIILDESEFRFLHNEDAMAT--------EKLAEGIRKFAAD 305 (317)
T ss_pred CCeEeCCHHHHHHHHhCCCCcCccCCcccc--cccc-ccCCCCCHHHHHHHhCCCcchH--------HHHHHHHHHHHHH
Confidence 12 267888888886532 10000 00000 0011 2345678888875544332210 1123445666666
Q ss_pred hHHHHH
Q 020143 294 NSYFHE 299 (330)
Q Consensus 294 ~~~F~~ 299 (330)
+....+
T Consensus 306 ~~~Le~ 311 (317)
T TIGR00874 306 QEKLEK 311 (317)
T ss_pred HHHHHH
Confidence 655443
No 22
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=42.68 E-value=67 Score=32.36 Aligned_cols=49 Identities=16% Similarity=0.155 Sum_probs=30.6
Q ss_pred hcCCCccccccCCCCCCCcchhhhhcCCCCCC----CCHHHHHHHHHHCCCCcc
Q 020143 141 MLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHN----DSIATALSVFNSIGIDDE 190 (330)
Q Consensus 141 ~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~----~~~~~l~~~F~~~Gls~~ 190 (330)
.+|-..+..+.||.|...-.... ...+|... ..+.++.+.|++.|+..+
T Consensus 173 eAGa~~ISPfVgRi~dw~~~~~g-~~~~~~~~dpGv~~v~~i~~~~~~~~~~T~ 225 (391)
T PRK12309 173 EAGVTLISPFVGRILDWYKKETG-RDSYPGAEDPGVQSVTQIYNYYKKFGYKTE 225 (391)
T ss_pred HcCCCEEEeecchhhhhhhhccC-CCccccccchHHHHHHHHHHHHHhcCCCcE
Confidence 35778899999998774322111 11244332 247888888989887543
No 23
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=41.87 E-value=21 Score=34.90 Aligned_cols=49 Identities=14% Similarity=0.053 Sum_probs=29.6
Q ss_pred hcCCCccccccCCCCCCCcchhhhhcCCCC----CCCCHHHHHHHHHHCCCCcc
Q 020143 141 MLGGPRIPIKTGRRDSRVSYLAEVEKFIPN----HNDSIATALSVFNSIGIDDE 190 (330)
Q Consensus 141 ~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~----p~~~~~~l~~~F~~~Gls~~ 190 (330)
.+|-..+..+.||-|-..-..... ...+. +-..+.++.+.|++.|+..+
T Consensus 167 ~AGa~~ISPfVgRi~d~~~~~~~~-~~~~~~~d~Gv~~v~~i~~~~~~~~~~T~ 219 (313)
T cd00957 167 EAGVTLISPFVGRILDWYKKHSGD-KAYTAEEDPGVASVKKIYNYYKKFGYKTK 219 (313)
T ss_pred HcCCCEEEeecchHHHhhhhcccc-ccCCccCCcHHHHHHHHHHHHHHcCCCcE
Confidence 347778899999987542211000 01111 22357888889999998754
No 24
>PRK12346 transaldolase A; Provisional
Probab=41.05 E-value=38 Score=33.20 Aligned_cols=65 Identities=11% Similarity=-0.014 Sum_probs=37.2
Q ss_pred cchhhHHhhhcccch--hhcCCCccccccCCCCCCCcchhhhhcCCCC----CCCCHHHHHHHHHHCCCCcc
Q 020143 125 VSCADIVALSAREGI--VMLGGPRIPIKTGRRDSRVSYLAEVEKFIPN----HNDSIATALSVFNSIGIDDE 190 (330)
Q Consensus 125 VScADilalAar~AV--~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~----p~~~~~~l~~~F~~~Gls~~ 190 (330)
|+|-=-+.+....|+ ..+|-..+..+.||-|........ ...++. +-..+.++.+.|++.|+..+
T Consensus 150 I~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~-~~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~ 220 (316)
T PRK12346 150 INCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKP-MDPYVVEEDPGVKSVRNIYDYYKQHRYETI 220 (316)
T ss_pred CceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccc-cccccccCCChHHHHHHHHHHHHHcCCCcE
Confidence 444443444444443 345888899999999864322111 111211 22357788888988887644
No 25
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.17 E-value=64 Score=24.68 Aligned_cols=28 Identities=11% Similarity=0.152 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCCchhhHHHHHhccc
Q 020143 48 IIKQQVVQLYYKHGNTAVSWVRNLFHDC 75 (330)
Q Consensus 48 iVr~~v~~~~~~~~~~aa~llRL~FHDc 75 (330)
|.|+.+.+.++++|.+-...||+.+---
T Consensus 24 iark~~~k~lk~NPpine~~iR~M~~qm 51 (71)
T COG3763 24 IARKQMKKQLKDNPPINEEMIRMMMAQM 51 (71)
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHh
Confidence 8999999999999999999999988644
No 26
>PF06163 DUF977: Bacterial protein of unknown function (DUF977); InterPro: IPR010382 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=23.34 E-value=98 Score=26.38 Aligned_cols=32 Identities=22% Similarity=0.280 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhCCCCC-CCCCcccccccccC
Q 020143 298 HEQFSRAIALLSENNPLT-GDQGEVRKDCRYVN 329 (330)
Q Consensus 298 ~~~Fa~Am~Km~~lgv~t-g~~GeIR~~C~~~n 329 (330)
+.||-.+=.||..-+... =++||||+-=+..|
T Consensus 71 ~~dw~~~~~~~~~~~~~~~~pdg~~rry~~~~n 103 (127)
T PF06163_consen 71 RKDWDKARKKLVDPDLIWKLPDGEIRRYDRRQN 103 (127)
T ss_pred HHHHHHhHHhhccchhhhhCCCccccccccccc
Confidence 456666666664433222 26899998655444
No 27
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=22.02 E-value=64 Score=27.73 Aligned_cols=34 Identities=21% Similarity=0.435 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHCCCCcccc-eeeecccccccccc
Q 020143 173 DSIATALSVFNSIGIDDEGV-VALYGAHSVGRVHC 206 (330)
Q Consensus 173 ~~~~~l~~~F~~~Gls~~dl-VaLsGaHTiG~ahc 206 (330)
+++.+-+-.|+++||++.++ |.|--+|-||+++-
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r~ 65 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVRF 65 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeecccCcchhhe
Confidence 34566667899999999887 45556999998864
Done!