Your job contains 1 sequence.
>020144
MDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAV
ITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS
PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSN
AASYTKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQ
TILDDFNKHGPGTTQPTIAPSVVPAAPPAPPSSVIPNSASAGFITSREDVLTRAAALGRG
AATTGFKRFLALTEAAKDRKDGPFRKLFNT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020144
(330 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
DICTYBASE|DDB_G0285901 - symbol:DDB_G0285901 "Vps53-like ... 502 2.2e-47 1
ZFIN|ZDB-GENE-041114-199 - symbol:vps53 "vacuolar protein... 469 8.7e-44 1
MGI|MGI:1915549 - symbol:Vps53 "vacuolar protein sorting ... 441 2.8e-42 2
UNIPROTKB|Q5ZLD7 - symbol:VPS53 "Vacuolar protein sorting... 433 3.4e-41 2
UNIPROTKB|E2R1D2 - symbol:VPS53 "Uncharacterized protein"... 432 4.5e-41 2
UNIPROTKB|F1RHI3 - symbol:VPS53 "Uncharacterized protein"... 440 1.2e-40 1
UNIPROTKB|E1BJW7 - symbol:VPS53 "Uncharacterized protein"... 439 1.6e-40 1
WB|WBGene00011502 - symbol:vps-53 species:6239 "Caenorhab... 364 1.8e-32 1
UNIPROTKB|P34561 - symbol:vps-53 "Vacuolar protein sortin... 364 1.8e-32 1
TAIR|locus:2036396 - symbol:AT1G50970 "AT1G50970" species... 330 2.9e-29 1
POMBASE|SPAC3A12.15 - symbol:vps53 "GARP complex subunit ... 255 8.6e-21 1
UNIPROTKB|Q5VIR6 - symbol:VPS53 "Vacuolar protein sorting... 247 5.4e-20 1
CGD|CAL0005237 - symbol:VPS53 species:5476 "Candida albic... 219 5.5e-17 1
UNIPROTKB|Q5AB78 - symbol:VPS53 "Putative uncharacterized... 219 5.5e-17 1
>DICTYBASE|DDB_G0285901 [details] [associations]
symbol:DDB_G0285901 "Vps53-like domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0285901
Pfam:PF04100 EMBL:AAFI02000082 eggNOG:NOG327715 OMA:KFINHLF
InterPro:IPR007234 RefSeq:XP_637994.1 PRIDE:Q54MJ6
EnsemblProtists:DDB0233070 GeneID:8625345 KEGG:ddi:DDB_G0285901
InParanoid:Q54MJ6 ProtClustDB:CLSZ2846701 Uniprot:Q54MJ6
Length = 838
Score = 502 (181.8 bits), Expect = 2.2e-47, P = 2.2e-47
Identities = 97/236 (41%), Positives = 155/236 (65%)
Query: 10 RDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLV 69
++++ IC I+N+AE+C KTSG + + KIID + + +D+ ++Q++FS++I K + LV
Sbjct: 582 QEDKTICLIINTAEFCRKTSGQMTDGFKKIIDEKYKESIDLKDIQNDFSSIIAKGVKALV 641
Query: 70 LGLETKFDNEMAGMTRVPWGS-LESVGDQSEYVNGINMILTSSIPVLGSLLSPIYFQFFL 128
G+E K D + MTR+ WG + VGD S YVN + I++ S + + LSP +F++F
Sbjct: 642 SGIEAKLDPHLQSMTRMEWGERYQYVGDNSPYVNEVVQIISDSSQLEVAWLSPEHFRYFC 701
Query: 129 DKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFV 188
D ASS G R +I+KC+ ISE G+Q +LLD +KT+LLD+P+ + + + YTK +
Sbjct: 702 DLFASSFGLRIPQSIYKCRGISEIGSQGILLDITTIKTVLLDLPNKVKDGRSNSRYTKLL 761
Query: 189 SREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQ-QTIL 243
++E +KAE LLKVI D + +T++ L P+ T +FQ+I++LKG K D+ QT L
Sbjct: 762 NKEFAKAENLLKVIGCSQDHLVETFKDLFPDSTNADFQKIMDLKGFKVGDKIQTEL 817
>ZFIN|ZDB-GENE-041114-199 [details] [associations]
symbol:vps53 "vacuolar protein sorting 53 homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
Pfam:PF04100 ZFIN:ZDB-GENE-041114-199 EMBL:BX908796
GeneTree:ENSGT00390000015165 InterPro:IPR007234 IPI:IPI00994476
Ensembl:ENSDART00000122184 ArrayExpress:E7FAG0 Bgee:E7FAG0
Uniprot:E7FAG0
Length = 832
Score = 469 (170.2 bits), Expect = 8.7e-44, P = 8.7e-44
Identities = 100/251 (39%), Positives = 159/251 (63%)
Query: 14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
+IC I+++AEYC T+ L E + + +D L + +++S D FS VI+ ++ LV L+
Sbjct: 550 LICSILSTAEYCLATTLQLEEKLKEKVDKSLMERINLSGEMDTFSTVISNSIQLLVQDLD 609
Query: 74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
D + M+++PW S+E VGDQS YV + M + ++P++ L+ YF F K
Sbjct: 610 AACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRKYFTQFCIKF 669
Query: 132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--SYTKFVS 189
+S P+F ++F+CK IS GA+Q+LLDT ++KT+LLD+PS+G Q A SYTK V
Sbjct: 670 TNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKAPASYTKIVV 729
Query: 190 REMSKAEALLKVILSPVD-SVA--DTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
+ M++AE +LKV+++P + SV D Y LL + P FQ+IL++KGLK+++Q T+L+ F
Sbjct: 730 KGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADSNPETFQKILDMKGLKRSEQSTMLELF 789
Query: 247 NKHGPGTTQPT 257
+ P T P+
Sbjct: 790 RQRLP--TPPS 798
>MGI|MGI:1915549 [details] [associations]
symbol:Vps53 "vacuolar protein sorting 53 (yeast)"
species:10090 "Mus musculus" [GO:0000938 "GARP complex"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] MGI:MGI:1915549 Pfam:PF04100
GO:GO:0005794 GO:GO:0015031 GO:GO:0010008 EMBL:AL591129
eggNOG:NOG327715 GeneTree:ENSGT00390000015165 HOGENOM:HOG000265899
OMA:KFINHLF InterPro:IPR007234 CTD:55275 HOVERGEN:HBG092351
OrthoDB:EOG4894KW EMBL:AK009970 EMBL:AK019408 EMBL:AK033495
EMBL:AK049259 EMBL:BC034371 IPI:IPI00229808 IPI:IPI00387427
RefSeq:NP_080940.2 UniGene:Mm.46397 ProteinModelPortal:Q8CCB4
STRING:Q8CCB4 PhosphoSite:Q8CCB4 PaxDb:Q8CCB4 PRIDE:Q8CCB4
Ensembl:ENSMUST00000056601 Ensembl:ENSMUST00000108419 GeneID:68299
KEGG:mmu:68299 UCSC:uc007kfa.1 UCSC:uc011xzq.1 InParanoid:Q8CCB4
NextBio:326953 Bgee:Q8CCB4 CleanEx:MM_VPS53 Genevestigator:Q8CCB4
GermOnline:ENSMUSG00000017288 Uniprot:Q8CCB4
Length = 832
Score = 441 (160.3 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 92/251 (36%), Positives = 154/251 (61%)
Query: 14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
+IC I+++AEYC T+ L E + + +D L + ++++ D FS VI+ ++ LV L+
Sbjct: 551 LICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISSSIQLLVQDLD 610
Query: 74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
D + M+++PW ++E VGDQS YV + + + ++P++ L+ YF F K
Sbjct: 611 AACDPALIAMSKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 670
Query: 132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--SYTKFVS 189
A+S P+F ++FKCK IS GA+Q+LLDT ++K +LLD+PS+G Q A SYTK V
Sbjct: 671 ANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVV 730
Query: 190 REMSKAEALLKVILSPVDSVA---DTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
+ M++AE +LKV+++P + + D Y LL + FQ+IL++KGLK+++Q ++L+
Sbjct: 731 KGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNSETFQKILDMKGLKRSEQSSMLELL 790
Query: 247 NKHGPGTTQPT 257
+ P T
Sbjct: 791 RQRLPAPPSGT 801
Score = 39 (18.8 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 21 SAEYCHKTSGDLAE 34
S E+CH T +L++
Sbjct: 317 SVEFCHVTRAELSK 330
>UNIPROTKB|Q5ZLD7 [details] [associations]
symbol:VPS53 "Vacuolar protein sorting-associated protein
53 homolog" species:9031 "Gallus gallus" [GO:0015031 "protein
transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
Pfam:PF04100 GO:GO:0005794 GO:GO:0015031 GO:GO:0010008
eggNOG:NOG327715 HOGENOM:HOG000265899 InterPro:IPR007234
EMBL:AJ719797 IPI:IPI00589817 RefSeq:NP_001012824.1
UniGene:Gga.10180 ProteinModelPortal:Q5ZLD7 STRING:Q5ZLD7
GeneID:417622 KEGG:gga:417622 CTD:55275 HOVERGEN:HBG092351
InParanoid:Q5ZLD7 OrthoDB:EOG4894KW NextBio:20820897 Uniprot:Q5ZLD7
Length = 831
Score = 433 (157.5 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 90/245 (36%), Positives = 154/245 (62%)
Query: 14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
+IC I+++AEYC T+ L E + + +D+ L + ++++ D FS VI+ ++ LV L+
Sbjct: 550 LICSILSTAEYCLATTQQLEEKLKEKVDASLVERINLTGETDTFSIVISNSIQLLVQDLD 609
Query: 74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
D + M+++ W ++E VGDQS YV + + + ++P++ L+ YF F K
Sbjct: 610 AACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 669
Query: 132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--SYTKFVS 189
A+S P+F ++FKCK IS GA+Q+LLDT ++K +LLD+PS+G Q A SYT+ V
Sbjct: 670 ANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTRIVV 729
Query: 190 REMSKAEALLKVILSPVDS---VADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
+ M++AE +LKV+++P + D Y LL + + FQ+IL++KGLK+++Q ++L+ F
Sbjct: 730 KGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKRSEQSSMLELF 789
Query: 247 NKHGP 251
+ P
Sbjct: 790 RQRLP 794
Score = 37 (18.1 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 21 SAEYCHKTSGDLAE 34
+ E+CH T +LA+
Sbjct: 316 AVEFCHVTRTELAK 329
>UNIPROTKB|E2R1D2 [details] [associations]
symbol:VPS53 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000938 "GARP complex" evidence=IEA]
Pfam:PF04100 GeneTree:ENSGT00390000015165 OMA:KFINHLF
InterPro:IPR007234 CTD:55275 EMBL:AAEX03006688 RefSeq:XP_548308.2
ProteinModelPortal:E2R1D2 Ensembl:ENSCAFT00000030338 GeneID:491188
KEGG:cfa:491188 NextBio:20864069 Uniprot:E2R1D2
Length = 832
Score = 432 (157.1 bits), Expect = 4.5e-41, Sum P(2) = 4.5e-41
Identities = 92/251 (36%), Positives = 155/251 (61%)
Query: 14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
+IC I+++AEYC T+ L E + + +D L + ++++ D FS VI+ ++ LV L+
Sbjct: 551 LICGILSTAEYCLATTQQLEEKLKEKVDVSLIERINLTGEMDTFSTVISSSIQLLVQDLD 610
Query: 74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
D + M+++ W ++E VGDQS YV + + + ++P++ L+ YF F K
Sbjct: 611 AACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 670
Query: 132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--SYTKFVS 189
A+S P+F ++FKCK IS GA+Q+LLDT ++K +LLD+PS+G Q A SYTK V
Sbjct: 671 ANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVV 730
Query: 190 REMSKAEALLKVILSPVDSVA---DTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
+ M++AE +LKV+++P + + D Y LL + FQ+IL++KGLK+++Q ++L+
Sbjct: 731 KGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKRSEQSSMLELL 790
Query: 247 NKHGPGTTQPT 257
+ P T P+
Sbjct: 791 RQRLP--TPPS 799
Score = 37 (18.1 bits), Expect = 4.5e-41, Sum P(2) = 4.5e-41
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 21 SAEYCHKTSGDLAE 34
+ E+CH T +LA+
Sbjct: 317 AVEFCHVTRTELAK 330
>UNIPROTKB|F1RHI3 [details] [associations]
symbol:VPS53 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000938 "GARP complex" evidence=IEA] Pfam:PF04100
GeneTree:ENSGT00390000015165 OMA:KFINHLF InterPro:IPR007234
EMBL:CU929257 EMBL:CU928997 RefSeq:XP_003131861.1 UniGene:Ssc.19038
Ensembl:ENSSSCT00000019386 GeneID:100523207 KEGG:ssc:100523207
Uniprot:F1RHI3
Length = 832
Score = 440 (159.9 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 94/251 (37%), Positives = 155/251 (61%)
Query: 14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
+IC I+++AEYC T+ L E + + +D L + +++S D FS VI+ ++ LV L+
Sbjct: 551 LICSILSTAEYCLATTQQLEEKLKEKVDVSLIERINLSGEMDTFSTVISSSIQLLVQDLD 610
Query: 74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
D + M+++ W ++E VGDQS YV + + + ++P++ L+ YF F K
Sbjct: 611 AACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 670
Query: 132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--SYTKFVS 189
A+S P+F ++FKCK IS GA+Q+LLDT ++K +LLD+PS+G Q A SYTK V
Sbjct: 671 ANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVV 730
Query: 190 REMSKAEALLKVILSPVDSVA---DTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
+ M++AE +LKV+++P + + D Y LL + FQ+IL++KGLK+++Q + L+ F
Sbjct: 731 KGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKRSEQSSTLELF 790
Query: 247 NKHGPGTTQPT 257
+ P T P+
Sbjct: 791 RQRLP--TPPS 799
>UNIPROTKB|E1BJW7 [details] [associations]
symbol:VPS53 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000938 "GARP complex" evidence=IEA] Pfam:PF04100
GeneTree:ENSGT00390000015165 OMA:KFINHLF InterPro:IPR007234
CTD:55275 EMBL:DAAA02048650 EMBL:DAAA02048651 EMBL:DAAA02048652
IPI:IPI00699470 RefSeq:NP_001180097.1 UniGene:Bt.106826
Ensembl:ENSBTAT00000024133 GeneID:512144 KEGG:bta:512144
NextBio:20870262 Uniprot:E1BJW7
Length = 832
Score = 439 (159.6 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 91/245 (37%), Positives = 153/245 (62%)
Query: 14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
+IC I+++AEYC T+ L E + + +D L + ++++ D FS VI+ ++ LV L+
Sbjct: 551 LICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISSSIQLLVQDLD 610
Query: 74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
D + M+++ W ++E VGDQS YV + + + ++P++ L+ YF F K
Sbjct: 611 AACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKF 670
Query: 132 ASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--SYTKFVS 189
A+S P+F ++FKCK IS GA+Q+LLDT ++K +LLD+PS+G Q A SYTK V
Sbjct: 671 ANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVV 730
Query: 190 REMSKAEALLKVILSPVDSVA---DTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
+ M++AE +LKV+++P + + D Y LL + FQ+IL++KGLK+++Q ++L+ F
Sbjct: 731 KGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKRSEQSSMLELF 790
Query: 247 NKHGP 251
+ P
Sbjct: 791 RQRLP 795
>WB|WBGene00011502 [details] [associations]
symbol:vps-53 species:6239 "Caenorhabditis elegans"
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0000938 "GARP complex" evidence=IPI] Pfam:PF04100
GO:GO:0010008 GO:GO:0040015 GO:GO:0060378 EMBL:Z27079 GO:GO:0000938
PIR:D88564 PIR:S41008 RefSeq:NP_001255027.1 RefSeq:NP_001255028.1
ProteinModelPortal:P34561 PaxDb:P34561 PRIDE:P34561
EnsemblMetazoa:T05G5.8a.1 EnsemblMetazoa:T05G5.8a.2
EnsemblMetazoa:T05G5.8a.3 GeneID:176377 KEGG:cel:CELE_T05G5.8
UCSC:T05G5.8.2 CTD:176377 WormBase:T05G5.8a WormBase:T05G5.8b
eggNOG:NOG327715 GeneTree:ENSGT00390000015165 HOGENOM:HOG000265899
InParanoid:P34561 OMA:KFINHLF NextBio:892314 InterPro:IPR007234
Uniprot:P34561
Length = 798
Score = 364 (133.2 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 81/259 (31%), Positives = 149/259 (57%)
Query: 6 RISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKAL 65
R++ + ++C I+ +A++C +TS L E +S+ I GVD+S+ + F ++ ++L
Sbjct: 483 RLTPDQQFLVCCILATADWCAETSIQLQEKLSQRIP-----GVDISQETEAFYSITNQSL 537
Query: 66 VTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--Y 123
LV +E+ D + +++V W +++ VGD+S ++ + L ++P++ +LS Y
Sbjct: 538 QVLVQDVESTCDAALQSISKVNWTAVDCVGDESPFIGSMRAHLRQAVPLIRDMLSDRRKY 597
Query: 124 FQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGR--QTSNA 181
F F KLA+ L +F ++F+C+ IS GA+Q+LL+T ++KT LL +PS+ +
Sbjct: 598 FAHFCLKLATQLAHKFVGSLFRCRTISTHGAEQLLLETHSLKTFLLSVPSIDSIINSKPP 657
Query: 182 ASYTKFVSREMSKAEALLKVI---LSPVDSVADTYRALLPEGTPMEFQRILELKGLKKAD 238
+Y V+ ++KAE +LKV+ L VD + Y LLP E Q++LE+KG+K+ +
Sbjct: 658 TAYVTSVNAALTKAEMILKVVMCSLETVDEFVEQYIKLLPASDAAEMQKVLEMKGVKRQE 717
Query: 239 QQTILDDFN-KHGPGTTQP 256
+L+ + K G + P
Sbjct: 718 HSAVLNAYRLKIGASGSDP 736
>UNIPROTKB|P34561 [details] [associations]
symbol:vps-53 "Vacuolar protein sorting-associated protein
53 homolog" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] [GO:0000938 "GARP complex"
evidence=IDA] [GO:0060378 "regulation of brood size" evidence=IMP]
Pfam:PF04100 GO:GO:0010008 GO:GO:0040015 GO:GO:0060378 EMBL:Z27079
GO:GO:0000938 PIR:D88564 PIR:S41008 RefSeq:NP_001255027.1
RefSeq:NP_001255028.1 ProteinModelPortal:P34561 PaxDb:P34561
PRIDE:P34561 EnsemblMetazoa:T05G5.8a.1 EnsemblMetazoa:T05G5.8a.2
EnsemblMetazoa:T05G5.8a.3 GeneID:176377 KEGG:cel:CELE_T05G5.8
UCSC:T05G5.8.2 CTD:176377 WormBase:T05G5.8a WormBase:T05G5.8b
eggNOG:NOG327715 GeneTree:ENSGT00390000015165 HOGENOM:HOG000265899
InParanoid:P34561 OMA:KFINHLF NextBio:892314 InterPro:IPR007234
Uniprot:P34561
Length = 798
Score = 364 (133.2 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 81/259 (31%), Positives = 149/259 (57%)
Query: 6 RISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKAL 65
R++ + ++C I+ +A++C +TS L E +S+ I GVD+S+ + F ++ ++L
Sbjct: 483 RLTPDQQFLVCCILATADWCAETSIQLQEKLSQRIP-----GVDISQETEAFYSITNQSL 537
Query: 66 VTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--Y 123
LV +E+ D + +++V W +++ VGD+S ++ + L ++P++ +LS Y
Sbjct: 538 QVLVQDVESTCDAALQSISKVNWTAVDCVGDESPFIGSMRAHLRQAVPLIRDMLSDRRKY 597
Query: 124 FQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGR--QTSNA 181
F F KLA+ L +F ++F+C+ IS GA+Q+LL+T ++KT LL +PS+ +
Sbjct: 598 FAHFCLKLATQLAHKFVGSLFRCRTISTHGAEQLLLETHSLKTFLLSVPSIDSIINSKPP 657
Query: 182 ASYTKFVSREMSKAEALLKVI---LSPVDSVADTYRALLPEGTPMEFQRILELKGLKKAD 238
+Y V+ ++KAE +LKV+ L VD + Y LLP E Q++LE+KG+K+ +
Sbjct: 658 TAYVTSVNAALTKAEMILKVVMCSLETVDEFVEQYIKLLPASDAAEMQKVLEMKGVKRQE 717
Query: 239 QQTILDDFN-KHGPGTTQP 256
+L+ + K G + P
Sbjct: 718 HSAVLNAYRLKIGASGSDP 736
>TAIR|locus:2036396 [details] [associations]
symbol:AT1G50970 "AT1G50970" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006810 "transport"
evidence=ISS] Pfam:PF04100 EMBL:CP002684 InterPro:IPR007234
IPI:IPI00523682 RefSeq:NP_175510.2 UniGene:At.49965
ProteinModelPortal:F4I7Y2 EnsemblPlants:AT1G50970.1 GeneID:841519
KEGG:ath:AT1G50970 OMA:WTIFPAS Uniprot:F4I7Y2
Length = 569
Score = 330 (121.2 bits), Expect = 2.9e-29, P = 2.9e-29
Identities = 84/188 (44%), Positives = 100/188 (53%)
Query: 150 SETGAQQMLLDTQAVKTILLDIPSLGRQTSNAA--------SYTKFVSREMSKAEALLKV 201
SE MLLD +K ILL +PSL RQ +A SY K V+ +M +AEA+LKV
Sbjct: 390 SENSVYLMLLDAHDMKMILLKVPSLARQPEASALLVKTATASYVKLVNHQMKRAEAVLKV 449
Query: 202 ILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDFNKHGPGTTQPTIXXX 261
I SP+ +V DTYRAL PE TPMEFQRIL LKGL KA+QQ+ILDDFN H TQ ++
Sbjct: 450 IASPIVTVIDTYRALFPEETPMEFQRILVLKGLTKAEQQSILDDFNNHSSRITQLSVAAK 509
Query: 262 XXXXXXXXXXXXXXXXXXXXGFITSREDVXXXXXXXXXXXXXXXFKRFLALTEAAKDRKD 321
F + E+V F + ALT AAKDR
Sbjct: 510 TPEAHALPLALTNVAPAVR--FKANSEEVLTRAASAATTS----FMKLYALTGAAKDR-- 561
Query: 322 GPFRKLFN 329
PFRKLFN
Sbjct: 562 -PFRKLFN 568
>POMBASE|SPAC3A12.15 [details] [associations]
symbol:vps53 "GARP complex subunit Vps53 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000938 "GARP complex"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0006896 "Golgi to vacuole
transport" evidence=ISO] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=ISO] PomBase:SPAC3A12.15 Pfam:PF04100 GO:GO:0006886
EMBL:CU329670 GO:GO:0010008 GO:GO:0006896 GO:GO:0042147
GO:GO:0000938 eggNOG:NOG327715 OMA:KFINHLF InterPro:IPR007234
PIR:T38683 RefSeq:NP_593341.1 EnsemblFungi:SPAC3A12.15.1
GeneID:2542930 KEGG:spo:SPAC3A12.15 OrthoDB:EOG42JS19
NextBio:20803966 Uniprot:P87129
Length = 756
Score = 255 (94.8 bits), Expect = 8.6e-21, P = 8.6e-21
Identities = 73/245 (29%), Positives = 127/245 (51%)
Query: 19 VNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDN 78
+N+AEY ++T+ +L + +I + + D + SEV + VI+ + TL+ KF+N
Sbjct: 464 LNTAEYIYRTTIELEKRFQEISNKEFKDKMSFSEVLE----VISSSRGTLLKFATGKFEN 519
Query: 79 ----EMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS-PIYFQFFLDKLAS 133
++ ++++ ++E+VGDQS YV G +T+ S++ ++ + F D+
Sbjct: 520 VLNSDLEPLSKMDLKNIETVGDQSSYVGGAVQNMTAKASEFLSVVDLNMFARNFCDRSCE 579
Query: 134 SLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMS 193
S +F I+ K ISE GA+Q+LLD + K LL +P L + S SY ++ M
Sbjct: 580 SFTRQFLNAIYLAKPISEVGAEQLLLDLYSFKNALLKLPDLKQDYSITDSYINHLTIFMG 639
Query: 194 KAEALLKVILSPVDSVA---DTYRALLPEGTPMEFQRILELKGLKKADQQTILDDFNKHG 250
E +LK +L+P A +Y L+ + + F +LELKG+ K+D + L F+
Sbjct: 640 YIETVLKTLLTPASPKAGFIQSYIFLVKDRSVTNFTVLLELKGVGKSDISSFLQQFSDFV 699
Query: 251 PGTTQ 255
T Q
Sbjct: 700 KKTPQ 704
>UNIPROTKB|Q5VIR6 [details] [associations]
symbol:VPS53 "Vacuolar protein sorting-associated protein
53 homolog" species:9606 "Homo sapiens" [GO:0015031 "protein
transport" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000938 "GARP complex" evidence=IDA] Pfam:PF04100 EMBL:CH471108
GO:GO:0015031 GO:GO:0010008 GO:GO:0000938 eggNOG:NOG327715
HOGENOM:HOG000265899 OMA:KFINHLF InterPro:IPR007234 CTD:55275
HOVERGEN:HBG092351 OrthoDB:EOG4894KW EMBL:AY444797 EMBL:AF246287
EMBL:EU021218 EMBL:AK001841 EMBL:AK290343 EMBL:AC015853
EMBL:AC027455 EMBL:BC006116 EMBL:AF318335 IPI:IPI00181824
IPI:IPI00656021 IPI:IPI00847977 RefSeq:NP_001121631.1
RefSeq:NP_060759.2 UniGene:Hs.461819 ProteinModelPortal:Q5VIR6
DIP:DIP-59352N IntAct:Q5VIR6 STRING:Q5VIR6 PhosphoSite:Q5VIR6
DMDM:74746777 PaxDb:Q5VIR6 PRIDE:Q5VIR6 Ensembl:ENST00000291074
Ensembl:ENST00000437048 Ensembl:ENST00000571805 GeneID:55275
KEGG:hsa:55275 UCSC:uc002frm.2 UCSC:uc002frn.2
GeneCards:GC17M000381 H-InvDB:HIX0013386 HGNC:HGNC:25608
HPA:HPA022988 HPA:HPA024446 neXtProt:NX_Q5VIR6 PharmGKB:PA142670618
InParanoid:Q5VIR6 ChiTaRS:VPS53 GenomeRNAi:55275 NextBio:59405
ArrayExpress:Q5VIR6 Bgee:Q5VIR6 CleanEx:HS_VPS53
Genevestigator:Q5VIR6 GermOnline:ENSG00000141252 Uniprot:Q5VIR6
Length = 699
Score = 247 (92.0 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 50/146 (34%), Positives = 87/146 (59%)
Query: 14 VICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLE 73
+IC I+++AEYC T+ L E + + +D L + ++++ D FS VI+ ++ LV L+
Sbjct: 551 LICNILSTAEYCLATTQQLEEKLKEKVDVSLIERINLTGEMDTFSTVISSSIQLLVQDLD 610
Query: 74 TKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKL 131
D + M+++ W ++E VGDQS YV + + + ++P++ L+ YF F K
Sbjct: 611 AACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCVKF 670
Query: 132 ASSLGPRFYANIFKCKHISETGAQQM 157
A+S P+F ++FKCK IS GA+Q+
Sbjct: 671 ANSFIPKFITHLFKCKPISMVGAEQV 696
>CGD|CAL0005237 [details] [associations]
symbol:VPS53 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000938 "GARP complex"
evidence=IEA] [GO:0006896 "Golgi to vacuole transport"
evidence=IEA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IEA] CGD:CAL0005237 Pfam:PF04100 EMBL:AACQ01000036
EMBL:AACQ01000035 eggNOG:NOG327715 InterPro:IPR007234
RefSeq:XP_718949.1 RefSeq:XP_719053.1 GeneID:3639319 GeneID:3639467
KEGG:cal:CaO19.13513 KEGG:cal:CaO19.6094 Uniprot:Q5AB78
Length = 699
Score = 219 (82.2 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 61/233 (26%), Positives = 115/233 (49%)
Query: 18 IVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFD 77
++N+ +Y +LA+ + K +A D F +I K++ +L+L + +
Sbjct: 408 LLNTGDYIINNIEELADKIQKTTTHTIAPFNT-----DAFYQLINKSISSLLLKMSIDYK 462
Query: 78 NEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPV-LGSLLSPIYFQFFLDKLASSLG 136
+ WG L+SV D S Y+N + ++ V L ++ Y + F DKL L
Sbjct: 463 PCWREFFNLDWGQLDSVNDISSYMNDLKSKTAENLRVILPLIIRDSYVRNFNDKLVEMLV 522
Query: 137 PRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAE 196
N+ K ++ T +Q+L+D ++K L P L + SY KFV+ + +
Sbjct: 523 TTIANNLKFVKPMTATSVEQILMDVSSLKEDALRFP-LFSVKDVSKSYQKFVNHQFGDLQ 581
Query: 197 ALLKVILSP---VDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
+LLK+++ P V+++ ++Y AL+ + + F ++L+LKG+ KA +D+F
Sbjct: 582 SLLKLLMVPSIPVENLIESYFALIGDKSVSNFVKVLKLKGVDKAQHHKYVDNF 634
>UNIPROTKB|Q5AB78 [details] [associations]
symbol:VPS53 "Putative uncharacterized protein VPS53"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0005237 Pfam:PF04100
EMBL:AACQ01000036 EMBL:AACQ01000035 eggNOG:NOG327715
InterPro:IPR007234 RefSeq:XP_718949.1 RefSeq:XP_719053.1
GeneID:3639319 GeneID:3639467 KEGG:cal:CaO19.13513
KEGG:cal:CaO19.6094 Uniprot:Q5AB78
Length = 699
Score = 219 (82.2 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 61/233 (26%), Positives = 115/233 (49%)
Query: 18 IVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFD 77
++N+ +Y +LA+ + K +A D F +I K++ +L+L + +
Sbjct: 408 LLNTGDYIINNIEELADKIQKTTTHTIAPFNT-----DAFYQLINKSISSLLLKMSIDYK 462
Query: 78 NEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPV-LGSLLSPIYFQFFLDKLASSLG 136
+ WG L+SV D S Y+N + ++ V L ++ Y + F DKL L
Sbjct: 463 PCWREFFNLDWGQLDSVNDISSYMNDLKSKTAENLRVILPLIIRDSYVRNFNDKLVEMLV 522
Query: 137 PRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAE 196
N+ K ++ T +Q+L+D ++K L P L + SY KFV+ + +
Sbjct: 523 TTIANNLKFVKPMTATSVEQILMDVSSLKEDALRFP-LFSVKDVSKSYQKFVNHQFGDLQ 581
Query: 197 ALLKVILSP---VDSVADTYRALLPEGTPMEFQRILELKGLKKADQQTILDDF 246
+LLK+++ P V+++ ++Y AL+ + + F ++L+LKG+ KA +D+F
Sbjct: 582 SLLKLLMVPSIPVENLIESYFALIGDKSVSNFVKVLKLKGVDKAQHHKYVDNF 634
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 330 292 0.00090 115 3 11 22 0.39 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 595 (63 KB)
Total size of DFA: 172 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.71u 0.10s 21.81t Elapsed: 00:00:01
Total cpu time: 21.71u 0.10s 21.81t Elapsed: 00:00:01
Start: Sat May 11 04:14:41 2013 End: Sat May 11 04:14:42 2013