Query 020149
Match_columns 330
No_of_seqs 184 out of 1489
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 07:24:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020149.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020149hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 7E-109 1E-113 789.3 27.0 299 26-330 21-324 (324)
2 cd00693 secretory_peroxidase H 100.0 6E-102 1E-106 739.1 26.5 298 29-329 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 1.3E-72 2.7E-77 520.7 9.4 229 46-294 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 9.4E-70 2E-74 512.9 22.3 232 42-326 14-256 (289)
5 cd00691 ascorbate_peroxidase A 100.0 3.6E-67 7.8E-72 489.8 20.3 230 41-315 11-251 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 9.5E-66 2.1E-70 478.9 21.8 232 32-315 3-248 (250)
7 cd00692 ligninase Ligninase an 100.0 1.1E-63 2.4E-68 479.3 21.9 236 42-330 16-287 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 9.4E-63 2E-67 458.2 21.5 220 44-315 18-248 (251)
9 cd00314 plant_peroxidase_like 100.0 2E-59 4.4E-64 438.4 19.7 224 45-311 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 5.2E-55 1.1E-59 425.9 19.1 259 44-320 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 1.3E-52 2.7E-57 432.2 20.2 255 44-316 55-404 (716)
12 cd08201 plant_peroxidase_like_ 100.0 2.4E-50 5.1E-55 375.0 10.8 231 31-311 15-264 (264)
13 PRK15061 catalase/hydroperoxid 100.0 2.2E-48 4.7E-53 398.9 19.9 257 44-318 57-412 (726)
14 cd08200 catalase_peroxidase_2 100.0 3.7E-38 8.1E-43 296.7 17.9 220 48-313 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 3E-33 6.5E-38 288.9 16.4 221 45-314 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 6.3E-33 1.4E-37 285.2 18.4 221 48-314 442-722 (726)
17 COG0376 KatG Catalase (peroxid 100.0 1.6E-27 3.5E-32 235.7 16.0 237 59-313 93-416 (730)
18 COG0376 KatG Catalase (peroxid 99.5 8.6E-14 1.9E-18 138.9 14.8 216 48-313 452-725 (730)
19 PTZ00411 transaldolase-like pr 58.9 95 0.0021 30.7 10.3 48 140-187 180-230 (333)
20 PF11895 DUF3415: Domain of un 47.2 17 0.00036 28.5 2.3 18 298-315 3-20 (80)
21 COG3763 Uncharacterized protei 42.5 81 0.0018 24.1 5.3 28 45-72 24-51 (71)
22 KOG0400 40S ribosomal protein 36.2 28 0.00061 29.9 2.2 33 171-203 31-64 (151)
23 PRK00523 hypothetical protein; 26.3 87 0.0019 24.1 3.2 28 45-72 25-52 (72)
24 KOG4252 GTP-binding protein [S 22.5 70 0.0015 29.3 2.4 38 70-120 82-123 (246)
25 PF06387 Calcyon: D1 dopamine 21.7 78 0.0017 28.5 2.5 12 32-43 106-117 (186)
26 PRK01844 hypothetical protein; 20.1 1.4E+02 0.0029 23.0 3.2 28 45-72 24-51 (72)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=6.5e-109 Score=789.32 Aligned_cols=299 Identities=44% Similarity=0.746 Sum_probs=284.1
Q ss_pred CCCCCCcchhcccCchHHHHHHHHHHHHHHhcchhhhhHHHHHhhccCccCCCceEeecCCCCCcccccCCCCCCchhhH
Q 020149 26 SSGYLYPQFYDHSCPKAQEIVQCIVAKAVAKETRMAASLLRLHFHDCFVKGCDASILLDSSGSIISEKRSNPNRNSARGF 105 (330)
Q Consensus 26 ~~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDcfv~GCDgSiLL~~~~~~~~E~~~~~N~~~~~g~ 105 (330)
+.++|+++||++|||++|+||++.|++.+.+||+++|++|||+||||||+||||||||+++ ..||++++|. ++|||
T Consensus 21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~Gf 96 (324)
T PLN03030 21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLRGY 96 (324)
T ss_pred hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-CcchH
Confidence 3567999999999999999999999999999999999999999999999999999999864 4699999998 78999
Q ss_pred HHHHHHHHHHhhhCCCCccHHHHHHHhhhhhhcccCCCceeccCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhcCC
Q 020149 106 EVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGL 185 (330)
Q Consensus 106 ~~I~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl 185 (330)
++|++||++||++||++||||||||+||||||+++|||.|+|++||||+++|.+.++. +||+|+.++++|++.|+++||
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl 175 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGL 175 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999877775 899999999999999999999
Q ss_pred CcccceeeccccccccccccccccccccCCCCC-CCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCCccChHHHHHh
Q 020149 186 DIVDLVALSGSHTIGNARCTSFRQRLYNQSGNG-QPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPTKFDNSYFKNI 264 (330)
Q Consensus 186 ~~~dlVaLsGaHTiG~~hc~~f~~Rl~n~~g~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l 264 (330)
+.+|||+||||||||++||.+|.+|||||.+++ .+||+||+.|+..|++.||..+++.+.+++|+.||.+|||+||+||
T Consensus 176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nl 255 (324)
T PLN03030 176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNL 255 (324)
T ss_pred CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHH
Confidence 999999999999999999999999999999875 5899999999999999999643333468899999999999999999
Q ss_pred hhcCCccccchhhhcCChhHHHHHHHHhhCH----HHHHHHHHHHHHHHhcCCCCCCCCCcccccCccCC
Q 020149 265 LASKGLLNSDQVLSTKNEASMELVKKYAENN----DLFFQQFAKSMVKMGNISPLTGNRGEIRRNCRRIN 330 (330)
Q Consensus 265 ~~~~gll~SD~~L~~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 330 (330)
+.++|+|+|||+|+. |++|+++|++||.|+ +.|+++|++||+|||+|+|+||.+|||||+|+++|
T Consensus 256 l~~rGlL~SDq~L~~-d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 256 KNGRGILESDQKLWT-DASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HhcCCCcCCchHhhc-CccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 999999999999999 999999999999874 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=6e-102 Score=739.13 Aligned_cols=298 Identities=57% Similarity=0.966 Sum_probs=287.9
Q ss_pred CCCcchhcccCchHHHHHHHHHHHHHHhcchhhhhHHHHHhhccCccCCCceEeecCCCCCcccccCCCCCCchhhHHHH
Q 020149 29 YLYPQFYDHSCPKAQEIVQCIVAKAVAKETRMAASLLRLHFHDCFVKGCDASILLDSSGSIISEKRSNPNRNSARGFEVI 108 (330)
Q Consensus 29 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDcfv~GCDgSiLL~~~~~~~~E~~~~~N~~~~~g~~~I 108 (330)
||+++||++|||++|+||+++|++.+.+|++++|++|||+||||||+||||||||+++.+..+|+++++|. +++||++|
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~-~l~g~~~i 79 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNL-SLRGFDVI 79 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCC-CcchhHHH
Confidence 69999999999999999999999999999999999999999999999999999999887778999999998 68999999
Q ss_pred HHHHHHHhhhCCCCccHHHHHHHhhhhhhcccCCCceeccCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhcCCCcc
Q 020149 109 DEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIV 188 (330)
Q Consensus 109 ~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~ 188 (330)
++||+++|+.||++||||||||||||+||+++|||.|+|++||+|+.+|.+..+ +.||+|+.+++++++.|+++||+++
T Consensus 80 ~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~ 158 (298)
T cd00693 80 DDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVT 158 (298)
T ss_pred HHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHH
Confidence 999999999999999999999999999999999999999999999998877665 7899999999999999999999999
Q ss_pred cceeeccccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCCccChHHHHHhhhcC
Q 020149 189 DLVALSGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASK 268 (330)
Q Consensus 189 dlVaLsGaHTiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~ 268 (330)
|||+|+||||||++||.+|.+|||||+|++++||+||+.|+..|++.||..+++.+.+++|+.||.+|||+||++|+.++
T Consensus 159 d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~~ 238 (298)
T cd00693 159 DLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGR 238 (298)
T ss_pred HheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999997655567789999999999999999999999
Q ss_pred CccccchhhhcCChhHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccccCccC
Q 020149 269 GLLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIRRNCRRI 329 (330)
Q Consensus 269 gll~SD~~L~~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 329 (330)
|+|+|||+|+. |++|+++|++||.||+.|+++|++||+||++|+|+||.+||||++|+++
T Consensus 239 glL~SD~~L~~-d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 239 GLLTSDQALLS-DPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred cCccCCHHhcc-CccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999 9999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=1.3e-72 Score=520.73 Aligned_cols=229 Identities=53% Similarity=0.888 Sum_probs=209.1
Q ss_pred HHHHHHHHHHhcchhhhhHHHHHhhccCc-cCCCceEeecCCCCCcccccCCCCCCchhhHHHHHHHHHHHhhhCCCCcc
Q 020149 46 VQCIVAKAVAKETRMAASLLRLHFHDCFV-KGCDASILLDSSGSIISEKRSNPNRNSARGFEVIDEIKSALEKECPQTVS 124 (330)
Q Consensus 46 V~~~v~~~~~~d~~~aa~llRL~FHDcfv-~GCDgSiLL~~~~~~~~E~~~~~N~~~~~g~~~I~~iK~~le~~cp~~VS 124 (330)
||+.|++.+.++++++|++|||+|||||+ +|||||||+. ..|+++++|.++.+|+++|+.||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 79999999999999999999999999999 9999999983 57999999996445999999999999999999999
Q ss_pred HHHHHHHhhhhhhcccCCCceeccCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhcCCCcccceeeccccccccccc
Q 020149 125 CADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALSGSHTIGNARC 204 (330)
Q Consensus 125 cADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHTiG~~hc 204 (330)
|||||+||||+||+.+|||.|+|++||+|+.+++..++ .+||+|+.++++|++.|+++|||++|||||+||||||++||
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c 154 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHC 154 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESG
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceeccccccccee
Confidence 99999999999999999999999999999999998766 67999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCCccChHHHHHhhhcCCccccchhhhcCChhH
Q 020149 205 TSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASKGLLNSDQVLSTKNEAS 284 (330)
Q Consensus 205 ~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~gll~SD~~L~~~d~~t 284 (330)
.+|. ||| + .+||+||+.|+.. .| ..+++ +.+++| ||.+|||+||++|+.++|+|+||++|++ |++|
T Consensus 155 ~~f~-rl~-~----~~dp~~d~~~~~~---~C-~~~~~-~~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~-d~~t 220 (230)
T PF00141_consen 155 SSFS-RLY-F----PPDPTMDPGYAGQ---NC-NSGGD-NGVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLN-DPET 220 (230)
T ss_dssp GCTG-GTS-C----SSGTTSTHHHHHH---SS-STSGC-TCEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHH-STTH
T ss_pred cccc-ccc-c----cccccccccccee---cc-CCCcc-cccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhc-CHHH
Confidence 9999 999 5 5799999999988 99 43323 378898 9999999999999999999999999999 9999
Q ss_pred HHHHHHHhhC
Q 020149 285 MELVKKYAEN 294 (330)
Q Consensus 285 ~~~V~~yA~d 294 (330)
+++|++||+|
T Consensus 221 ~~~V~~yA~d 230 (230)
T PF00141_consen 221 RPIVERYAQD 230 (230)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhcC
Confidence 9999999986
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=9.4e-70 Score=512.94 Aligned_cols=232 Identities=28% Similarity=0.426 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHhhccC-------ccCCCceEeecCCCCCcccccCCCCCCchhhHHHHHHHHHH
Q 020149 42 AQEIVQCIVAKAVAKETRMAASLLRLHFHDCF-------VKGCDASILLDSSGSIISEKRSNPNRNSARGFEVIDEIKSA 114 (330)
Q Consensus 42 ~e~iV~~~v~~~~~~d~~~aa~llRL~FHDcf-------v~GCDgSiLL~~~~~~~~E~~~~~N~~~~~g~~~I~~iK~~ 114 (330)
++ .+++++ ..+.+||+++|.+|||+||||| ++||||||++. +|+++++|.++.+||++|++||++
T Consensus 14 ~~-~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~ 85 (289)
T PLN02608 14 IE-KARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAK 85 (289)
T ss_pred HH-HHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHH
Confidence 45 456666 4477899999999999999999 89999999983 699999998544799999999998
Q ss_pred HhhhCCCCccHHHHHHHhhhhhhcccCCCceeccCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhcCCCcccceeec
Q 020149 115 LEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALS 194 (330)
Q Consensus 115 le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLs 194 (330)
+ ++|||||||+||||+||+.+|||.|+|++||+|+++++ ++++||+|+.+++++++.|+++|||++|||+|+
T Consensus 86 ~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~---~~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLs 157 (289)
T PLN02608 86 H-----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACP---EEGRLPDAKKGAKHLRDVFYRMGLSDKDIVALS 157 (289)
T ss_pred c-----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCC---ccCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhc
Confidence 7 48999999999999999999999999999999999985 456899999999999999999999999999999
Q ss_pred cccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCCccChHHHHHhhhc--CCc--
Q 020149 195 GSHTIGNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILAS--KGL-- 270 (330)
Q Consensus 195 GaHTiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~--~gl-- 270 (330)
||||||.+||. |+ +|.|+ ++ .||.+|||+||++|+.+ +|+
T Consensus 158 GAHTiG~ahc~----r~-g~~g~------------------------------~~-~Tp~~FDN~Yy~~ll~~~~~gll~ 201 (289)
T PLN02608 158 GGHTLGRAHPE----RS-GFDGP------------------------------WT-KEPLKFDNSYFVELLKGESEGLLK 201 (289)
T ss_pred ccccccccccc----CC-CCCCC------------------------------CC-CCCCccChHHHHHHHcCCcCCccc
Confidence 99999999994 54 33220 12 69999999999999999 798
Q ss_pred cccchhhhcCChhHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccccC
Q 020149 271 LNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIRRNC 326 (330)
Q Consensus 271 l~SD~~L~~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C 326 (330)
|+|||+|+. |++|+++|++||.|++.|+++|++||+||++|+|+||++||+.+.-
T Consensus 202 L~SD~~L~~-d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~ 256 (289)
T PLN02608 202 LPTDKALLE-DPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKST 256 (289)
T ss_pred cccCHhhhc-ChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccC
Confidence 799999999 9999999999999999999999999999999999999999998754
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=3.6e-67 Score=489.84 Aligned_cols=230 Identities=27% Similarity=0.371 Sum_probs=208.4
Q ss_pred hHHHHHHHHHHHHHHhcchhhhhHHHHHhhccCccCCCceEeecCC---CCCcccccCCCCCCchhhHHHHHHHHHHHhh
Q 020149 41 KAQEIVQCIVAKAVAKETRMAASLLRLHFHDCFVKGCDASILLDSS---GSIISEKRSNPNRNSARGFEVIDEIKSALEK 117 (330)
Q Consensus 41 ~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDcfv~GCDgSiLL~~~---~~~~~E~~~~~N~~~~~g~~~I~~iK~~le~ 117 (330)
..++||+++|++.+. +++++|++|||+|||||+ ||+|+++++. ..+.+|+++++|.++.+||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 457899999999999 999999999999999994 8888777532 23357999999996559999999999986
Q ss_pred hCCCCccHHHHHHHhhhhhhcccCCCceeccCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhcCCCcccceeecccc
Q 020149 118 ECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALSGSH 197 (330)
Q Consensus 118 ~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaH 197 (330)
| +|||||||+||||+||+.+|||.|+|++||||+.++....++.+||.|+.+++++++.|+++|||++|||+|||||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGaH 162 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGAH 162 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhcccc
Confidence 4 8999999999999999999999999999999999998877888999999999999999999999999999999999
Q ss_pred ccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCCccChHHHHHhhhcCC--------
Q 020149 198 TIGNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASKG-------- 269 (330)
Q Consensus 198 TiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~g-------- 269 (330)
|||.+||.. ++|.|+ |..||.+|||+||++|+.++|
T Consensus 163 TiG~a~c~~-----~~~~g~-------------------------------~~~tp~~FDn~Yy~~ll~~~g~~~~~~~~ 206 (253)
T cd00691 163 TLGRCHKER-----SGYDGP-------------------------------WTKNPLKFDNSYFKELLEEDWKLPTPGLL 206 (253)
T ss_pred eeecccccC-----CCCCCC-------------------------------CCCCCCcccHHHHHHHhcCCCccCcCcce
Confidence 999999953 233221 115999999999999999999
Q ss_pred ccccchhhhcCChhHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCC
Q 020149 270 LLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPL 315 (330)
Q Consensus 270 ll~SD~~L~~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 315 (330)
+|+||++|+. |++|+++|++||.|+++|+++|++||+||+++||.
T Consensus 207 ~L~sD~~L~~-d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 207 MLPTDKALLE-DPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred echhhHHHHc-CccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999 99999999999999999999999999999999986
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=9.5e-66 Score=478.86 Aligned_cols=232 Identities=30% Similarity=0.462 Sum_probs=208.4
Q ss_pred cchhccc--CchHHHHHHHHHHHHHHhcchhhhhHHHHHhh-----ccCcc--CCCceEeecCCCCCcccccCCCCCCch
Q 020149 32 PQFYDHS--CPKAQEIVQCIVAKAVAKETRMAASLLRLHFH-----DCFVK--GCDASILLDSSGSIISEKRSNPNRNSA 102 (330)
Q Consensus 32 ~~fY~~s--CP~~e~iV~~~v~~~~~~d~~~aa~llRL~FH-----Dcfv~--GCDgSiLL~~~~~~~~E~~~~~N~~~~ 102 (330)
.+||... |+.+++.+++.+++.+ .+++++|.+|||+|| ||+++ ||||||.. .+|+++++|.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~ 75 (250)
T PLN02364 3 KNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIH 75 (250)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHH
Confidence 3567643 8899999999999988 789999999999999 88886 99999943 4699999998655
Q ss_pred hhHHHHHHHHHHHhhhCCCCccHHHHHHHhhhhhhcccCCCceeccCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHh
Q 020149 103 RGFEVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKL 182 (330)
Q Consensus 103 ~g~~~I~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~~~~~LP~p~~~~~~l~~~F~~ 182 (330)
+||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.. +++||.|+.++++|++.|++
T Consensus 76 ~~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~ 147 (250)
T PLN02364 76 IALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAK 147 (250)
T ss_pred HHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHH
Confidence 9999999999998 589999999999999999999999999999999999863 56799999999999999997
Q ss_pred -cCCCcccceeeccccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCCccChHHH
Q 020149 183 -QGLDIVDLVALSGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPTKFDNSYF 261 (330)
Q Consensus 183 -~Gl~~~dlVaLsGaHTiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy 261 (330)
+|||++|||+|+||||||++|| .|+ +|.|. ++ .||.+|||+||
T Consensus 148 ~~Gl~~~d~VaLsGaHTiG~~hc----~r~-~~~g~------------------------------~~-~tp~~fDn~Yy 191 (250)
T PLN02364 148 QMGLSDKDIVALSGAHTLGRCHK----DRS-GFEGA------------------------------WT-SNPLIFDNSYF 191 (250)
T ss_pred hcCCCHHHheeeecceeeccccC----CCC-CCCCC------------------------------CC-CCCCccchHHH
Confidence 5999999999999999999999 454 33220 12 69999999999
Q ss_pred HHhhhc--CCccc--cchhhhcCChhHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCC
Q 020149 262 KNILAS--KGLLN--SDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPL 315 (330)
Q Consensus 262 ~~l~~~--~gll~--SD~~L~~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 315 (330)
++|+.+ +|+|. |||+|+. |++|+.+|++||.|++.|+++|++||+||++||+-
T Consensus 192 ~~ll~~~~~gll~l~sD~~L~~-d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 192 KELLSGEKEGLLQLVSDKALLD-DPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HHHhcCCcCCCccccchHHHcc-CchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 999999 89875 9999999 99999999999999999999999999999999973
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.1e-63 Score=479.32 Aligned_cols=236 Identities=23% Similarity=0.330 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHHHHhc---chhhhhHHHHHhhccCc------------cCCCceEeecCCCCCcccccCCCCCCchhhHH
Q 020149 42 AQEIVQCIVAKAVAKE---TRMAASLLRLHFHDCFV------------KGCDASILLDSSGSIISEKRSNPNRNSARGFE 106 (330)
Q Consensus 42 ~e~iV~~~v~~~~~~d---~~~aa~llRL~FHDcfv------------~GCDgSiLL~~~~~~~~E~~~~~N~~~~~g~~ 106 (330)
+|..|++.|++.+..+ ...++.+|||+||||++ +||||||||+.+ .|+++++|.+ ++ +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~g-L~--~ 88 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIG-LD--E 88 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCC-HH--H
Confidence 5889999999999854 45778899999999997 899999999742 6999999984 55 8
Q ss_pred HHHHHHHHHhhhCCCCccHHHHHHHhhhhhhcc-cCCCceeccCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhcCC
Q 020149 107 VIDEIKSALEKECPQTVSCADILALAARDSTVL-TGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGL 185 (330)
Q Consensus 107 ~I~~iK~~le~~cp~~VScADilalAar~AV~~-~GGP~~~v~~GRrD~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl 185 (330)
+|+.+|..+|+.| |||||||+||||+||+. .|||.|+|++||+|++++. +++.||.|+.++++|++.|+++||
T Consensus 89 vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~---~~g~LP~p~~sv~~l~~~F~~~Gf 162 (328)
T cd00692 89 IVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPA---PDGLVPEPFDSVDKILARFADAGF 162 (328)
T ss_pred HHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCC---cccCCCCCCCCHHHHHHHHHHcCC
Confidence 9999999999998 99999999999999995 5999999999999999886 456899999999999999999999
Q ss_pred CcccceeeccccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCCccChHHHHHhh
Q 020149 186 DIVDLVALSGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPTKFDNSYFKNIL 265 (330)
Q Consensus 186 ~~~dlVaLsGaHTiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~ 265 (330)
+.+|||+|+||||||++|. +||+++ .+++| .||.+|||+||+|++
T Consensus 163 ~~~E~VaLsGAHTiG~a~~---------------~Dps~~-------------------g~p~D-~TP~~FDn~Yf~~ll 207 (328)
T cd00692 163 SPDELVALLAAHSVAAQDF---------------VDPSIA-------------------GTPFD-STPGVFDTQFFIETL 207 (328)
T ss_pred CHHHHhhhcccccccccCC---------------CCCCCC-------------------CCCCC-CCcchhcHHHHHHHH
Confidence 9999999999999999981 477765 24678 699999999999987
Q ss_pred -hcCC-------------------ccccchhhhcCChhHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCccccc
Q 020149 266 -ASKG-------------------LLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPLTGNRGEIRRN 325 (330)
Q Consensus 266 -~~~g-------------------ll~SD~~L~~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~ 325 (330)
.+++ +|+||++|+. |++|+.+|++||+||++|+++|++||+||++|||. ...+.+
T Consensus 208 ~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~-D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~d 282 (328)
T cd00692 208 LKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLAR-DPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTD 282 (328)
T ss_pred HcCCCCCCccccccccccCccccccccchHHHhc-CCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhcc
Confidence 5555 4999999999 99999999999999999999999999999999986 347889
Q ss_pred CccCC
Q 020149 326 CRRIN 330 (330)
Q Consensus 326 C~~~n 330 (330)
|+.|+
T Consensus 283 cs~v~ 287 (328)
T cd00692 283 CSDVI 287 (328)
T ss_pred CcccC
Confidence 99875
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=9.4e-63 Score=458.16 Aligned_cols=220 Identities=29% Similarity=0.435 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHhcchhhhhHHHHHhhccCc-------cCCCceEeecCCCCCcccccCCCCCCchhhHHHHHHHHHHHh
Q 020149 44 EIVQCIVAKAVAKETRMAASLLRLHFHDCFV-------KGCDASILLDSSGSIISEKRSNPNRNSARGFEVIDEIKSALE 116 (330)
Q Consensus 44 ~iV~~~v~~~~~~d~~~aa~llRL~FHDcfv-------~GCDgSiLL~~~~~~~~E~~~~~N~~~~~g~~~I~~iK~~le 116 (330)
+-++..+.+.+ ++...+|.+|||+||||.+ |||||||++ ..|+++++|.++..++++|+.||+++
T Consensus 18 ~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf------~~E~~~~~N~gL~~~~~~i~~iK~~~- 89 (251)
T PLN02879 18 QRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRH------PQELAHDANNGLDIAVRLLDPIKELF- 89 (251)
T ss_pred HHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecC------hhhccCCCcCChHHHHHHHHHHHHHc-
Confidence 34577777776 4579999999999999975 899999975 36999999996555999999999998
Q ss_pred hhCCCCccHHHHHHHhhhhhhcccCCCceeccCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhcCCCcccceeeccc
Q 020149 117 KECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALSGS 196 (330)
Q Consensus 117 ~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGa 196 (330)
++|||||||+||||+||+.+|||.|+|++||+|+.++. ++++||+|+.++++|++.|+++||+++||||||||
T Consensus 90 ----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~---~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsGa 162 (251)
T PLN02879 90 ----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPP---PEGRLPQATKGVDHLRDVFGRMGLNDKDIVALSGG 162 (251)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCC---cccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeecc
Confidence 58999999999999999999999999999999999885 45789999999999999999999999999999999
Q ss_pred cccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCCccChHHHHHhhhc--CCc--cc
Q 020149 197 HTIGNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILAS--KGL--LN 272 (330)
Q Consensus 197 HTiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~--~gl--l~ 272 (330)
||||++||. | ++|.|. +| .||.+|||+||++|+.+ +|+ |+
T Consensus 163 HTiG~ah~~----r-~g~~g~------------------------------~d-~tp~~FDN~Yy~~ll~~~~~gll~L~ 206 (251)
T PLN02879 163 HTLGRCHKE----R-SGFEGA------------------------------WT-PNPLIFDNSYFKEILSGEKEGLLQLP 206 (251)
T ss_pred ccccccccc----c-ccCCCC------------------------------CC-CCccceeHHHHHHHHcCCcCCCccch
Confidence 999999995 3 343221 23 69999999999999999 898 67
Q ss_pred cchhhhcCChhHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCC
Q 020149 273 SDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGNISPL 315 (330)
Q Consensus 273 SD~~L~~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 315 (330)
||++|+. |++|+++|++||.||++|+++|++||+||++||+.
T Consensus 207 SD~aL~~-D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 207 TDKALLD-DPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred hhHHHhc-CCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999 99999999999999999999999999999999974
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=2e-59 Score=438.36 Aligned_cols=224 Identities=34% Similarity=0.514 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHhcchhhhhHHHHHhhccCcc--------CCCceEeecCCCCCcccccCCCCCCchhhHHHHHHHHHHHh
Q 020149 45 IVQCIVAKAVAKETRMAASLLRLHFHDCFVK--------GCDASILLDSSGSIISEKRSNPNRNSARGFEVIDEIKSALE 116 (330)
Q Consensus 45 iV~~~v~~~~~~d~~~aa~llRL~FHDcfv~--------GCDgSiLL~~~~~~~~E~~~~~N~~~~~g~~~I~~iK~~le 116 (330)
.|++.|++.+.+++.+++++|||+|||||+. ||||||+++. |+++++|.++.+++++|+.||.++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~------e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP------ELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc------cccCcccccHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999996 9999999963 9999999976799999999999999
Q ss_pred hhCCCCccHHHHHHHhhhhhhccc--CCCceeccCCCCCCCCCC--CCCCCCCCCCCCCCHHHHHHHHHhcCCCccccee
Q 020149 117 KECPQTVSCADILALAARDSTVLT--GGPSWEVPLGRRDSKGAS--LSGSNNDIPAPNNTFQTILTKFKLQGLDIVDLVA 192 (330)
Q Consensus 117 ~~cp~~VScADilalAar~AV~~~--GGP~~~v~~GRrD~~~s~--~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVa 192 (330)
. |++|||||||++|+++||+.+ |||.|+|++||+|+..+. ...+...+|.|..+++++++.|+++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 899999999999999999999 999999999999999774 3446677888999999999999999999999999
Q ss_pred ec-ccccc-ccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCCccChHHHHHhhhcC--
Q 020149 193 LS-GSHTI-GNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPTKFDNSYFKNILASK-- 268 (330)
Q Consensus 193 Ls-GaHTi-G~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~-- 268 (330)
|+ ||||| |++||..+..|+ | .+|+.||.+|||+||++|+.++
T Consensus 154 L~~GaHti~G~~~~~~~~~~~------------------------~----------~~~~~tp~~fDN~yy~~l~~~~~~ 199 (255)
T cd00314 154 LSAGAHTLGGKNHGDLLNYEG------------------------S----------GLWTSTPFTFDNAYFKNLLDMNWE 199 (255)
T ss_pred hccCCeeccCcccCCCCCccc------------------------C----------CCCCCCCCccchHHHHHHhcCCcc
Confidence 99 99999 999999877664 1 1244799999999999999998
Q ss_pred --------------CccccchhhhcCChhHHHHHHHHhhCHHHHHHHHHHHHHHHhc
Q 020149 269 --------------GLLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGN 311 (330)
Q Consensus 269 --------------gll~SD~~L~~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 311 (330)
++|+||++|+. |++|+.+|++||.|++.|+++|++||+||++
T Consensus 200 ~~~~~~~~~~~~~~~~l~sD~~L~~-d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 200 WRVGSPDPDGVKGPGLLPSDYALLS-DSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred cccCCccCCCcccCCCchhhHHHhc-CHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 89999999999 9999999999999999999999999999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=5.2e-55 Score=425.87 Aligned_cols=259 Identities=21% Similarity=0.277 Sum_probs=228.4
Q ss_pred HHHHHHHHHHHHhc--------chhhhhHHHHHhhccCc-------cCCC-ceEeecCCCCCcccccCCCCCCchhhHHH
Q 020149 44 EIVQCIVAKAVAKE--------TRMAASLLRLHFHDCFV-------KGCD-ASILLDSSGSIISEKRSNPNRNSARGFEV 107 (330)
Q Consensus 44 ~iV~~~v~~~~~~d--------~~~aa~llRL~FHDcfv-------~GCD-gSiLL~~~~~~~~E~~~~~N~~~~~g~~~ 107 (330)
+.|++.|++.+... ...+|-+|||+|||+.+ ||++ |+|.+ .+|++++.|.++.++..+
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf------~pe~~~~~N~gL~~a~~~ 118 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRF------APLNSWPDNVNLDKARRL 118 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCcccc------ccccCcHhhhhHHHHHHH
Confidence 57889999888754 47999999999999997 8997 78877 469999999987789999
Q ss_pred HHHHHHHHhhhCCCCccHHHHHHHhhhhhhcccCCCceeccCCCCCCCCCCCC---------------------------
Q 020149 108 IDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLS--------------------------- 160 (330)
Q Consensus 108 I~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~--------------------------- 160 (330)
++.||++.. ..||+||+|+||+..||+.+|||.+++..||.|...+...
T Consensus 119 L~pik~k~~----~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a 194 (409)
T cd00649 119 LWPIKQKYG----NKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAA 194 (409)
T ss_pred HHHHHHHcC----CCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhh
Confidence 999999874 4699999999999999999999999999999999754320
Q ss_pred --------CCCC--CCCCCCCCHHHHHHHHHhcCCCcccceee-ccccccccccccccccccccCCCCCCCCCCCCHHHH
Q 020149 161 --------GSNN--DIPAPNNTFQTILTKFKLQGLDIVDLVAL-SGSHTIGNARCTSFRQRLYNQSGNGQPDNTLDESYA 229 (330)
Q Consensus 161 --------~~~~--~LP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHTiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~ 229 (330)
.+++ .||+|..++.+|++.|.+||||++||||| +||||||++||.+|.+||. +||.+++.|+
T Consensus 195 ~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg-------~dP~~~~~~~ 267 (409)
T cd00649 195 VQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG-------PEPEAAPIEQ 267 (409)
T ss_pred hhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC-------CCCCcCHHHH
Confidence 1223 69999999999999999999999999999 5999999999999999983 6999999999
Q ss_pred HHHH--hcCCCCCC-CCCccccC---CCCCCccChHHHHHhhh------------------------------------c
Q 020149 230 AQLR--MGCPRSGG-DQNLFFLD---FVSPTKFDNSYFKNILA------------------------------------S 267 (330)
Q Consensus 230 ~~L~--~~Cp~~~~-~~~~~~~D---~~tp~~FDn~Yy~~l~~------------------------------------~ 267 (330)
+.|+ ..||...+ ++..+.+| +.||.+|||+||++|+. +
T Consensus 268 ~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~ 347 (409)
T cd00649 268 QGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHA 347 (409)
T ss_pred HhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccC
Confidence 9996 89997432 33455688 57999999999999998 5
Q ss_pred CCccccchhhhcCChhHHHHHHHHhhCHHHHHHHHHHHHHHH--hcCCCCCCCCC
Q 020149 268 KGLLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKM--GNISPLTGNRG 320 (330)
Q Consensus 268 ~gll~SD~~L~~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 320 (330)
+++|+||++|+. |++|+++|++||.|+++|+++|++||+|| +.+|+++--.|
T Consensus 348 ~gmL~SD~aL~~-Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 348 PMMLTTDLALRF-DPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred cccchhhHhhhc-CccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 689999999999 99999999999999999999999999999 69999886554
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.3e-52 Score=432.22 Aligned_cols=255 Identities=21% Similarity=0.268 Sum_probs=222.4
Q ss_pred HHHHHHHHHHHHhc--------chhhhhHHHHHhhccCc-------cCCC-ceEeecCCCCCcccccCCCCCCchhhHHH
Q 020149 44 EIVQCIVAKAVAKE--------TRMAASLLRLHFHDCFV-------KGCD-ASILLDSSGSIISEKRSNPNRNSARGFEV 107 (330)
Q Consensus 44 ~iV~~~v~~~~~~d--------~~~aa~llRL~FHDcfv-------~GCD-gSiLL~~~~~~~~E~~~~~N~~~~~g~~~ 107 (330)
+.|++.|++.+... ...+|-+|||+||++.+ |||+ |+|.+ .+|++++.|.++.+++.+
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf------~P~~sw~~N~~Ldka~~l 128 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRF------APLNSWPDNVNLDKARRL 128 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceec------ccccCchhhhhHHHHHHH
Confidence 35889999988764 37999999999999997 8885 78876 469999999987789999
Q ss_pred HHHHHHHHhhhCCCCccHHHHHHHhhhhhhcccCCCceeccCCCCCCCCCCC--------------------------C-
Q 020149 108 IDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASL--------------------------S- 160 (330)
Q Consensus 108 I~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~--------------------------~- 160 (330)
++.||+ .||++|||||||+||+++||+.+|||.|+|.+||+|+..+.. .
T Consensus 129 L~pIk~----kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~ 204 (716)
T TIGR00198 129 LWPIKK----KYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAAT 204 (716)
T ss_pred HHHHHH----HCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhh
Confidence 999988 488999999999999999999999999999999999943310 0
Q ss_pred ---------CCCCCCCCCCCCHHHHHHHHHhcCCCcccceeec-cccccccccccccccccccCCCCCCCCCCCCHHHHH
Q 020149 161 ---------GSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALS-GSHTIGNARCTSFRQRLYNQSGNGQPDNTLDESYAA 230 (330)
Q Consensus 161 ---------~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~ 230 (330)
+....+|+|..++.+|++.|+++|||++|||||+ ||||||++||.+|.+|| | +||++++.|++
T Consensus 205 ~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl----g---~dP~~~~~~~~ 277 (716)
T TIGR00198 205 EMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI----G---PDPEGAPIEEQ 277 (716)
T ss_pred hccccccCcccccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC----C---CCCCcCHHHHH
Confidence 1122699999999999999999999999999995 99999999999999998 2 79999999999
Q ss_pred HHHhcCCCCC---CCCCccccC---CCCCCccChHHHHHhhhc----------------------------------CCc
Q 020149 231 QLRMGCPRSG---GDQNLFFLD---FVSPTKFDNSYFKNILAS----------------------------------KGL 270 (330)
Q Consensus 231 ~L~~~Cp~~~---~~~~~~~~D---~~tp~~FDn~Yy~~l~~~----------------------------------~gl 270 (330)
.|+.+||... .++..+.+| +.||.+|||+||+||+.+ .++
T Consensus 278 gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~m 357 (716)
T TIGR00198 278 GLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIM 357 (716)
T ss_pred HhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCc
Confidence 9999998632 222346677 579999999999999975 689
Q ss_pred cccchhhhcCChhHHHHHHHHhhCHHHHHHHHHHHHHHHh--cCCCCC
Q 020149 271 LNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMG--NISPLT 316 (330)
Q Consensus 271 l~SD~~L~~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~t 316 (330)
|+||++|.. |++|+++|++||.|++.|+++|++||+||+ .+|++.
T Consensus 358 L~SDlaL~~-Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~ 404 (716)
T TIGR00198 358 LDADLALRF-DPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKS 404 (716)
T ss_pred cchhHHhcc-CccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchh
Confidence 999999999 999999999999999999999999999999 566654
No 12
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=2.4e-50 Score=375.00 Aligned_cols=231 Identities=24% Similarity=0.281 Sum_probs=184.0
Q ss_pred CcchhcccCchHHHHHHHHHHHHHHhcchhhhhHHHHHhhccC-------ccCCCceEeecCCCCCccccc-CCCCCCch
Q 020149 31 YPQFYDHSCPKAQEIVQCIVAKAVAKETRMAASLLRLHFHDCF-------VKGCDASILLDSSGSIISEKR-SNPNRNSA 102 (330)
Q Consensus 31 ~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDcf-------v~GCDgSiLL~~~~~~~~E~~-~~~N~~~~ 102 (330)
+.+||.. ..-+.|...-......++++++++|||+||||| ++||||||+++. +.+|+. .+.|. .+
T Consensus 15 ~~g~~~~---~f~~~v~~c~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~---~~~En~G~~~n~-~l 87 (264)
T cd08201 15 QSGYSAR---GFVAGVTPCTDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYEL---DRPENIGSGFNT-TL 87 (264)
T ss_pred cccceec---ccccccccccccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecC---CChhhccCchhh-cc
Confidence 4455554 222333444344555789999999999999999 899999999974 246777 45554 67
Q ss_pred hhHHHHHHHHHHHhhhCCCCccHHHHHHHhhhhhhcccCCCceeccCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHh
Q 020149 103 RGFEVIDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLSGSNNDIPAPNNTFQTILTKFKL 182 (330)
Q Consensus 103 ~g~~~I~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~~~~~LP~p~~~~~~l~~~F~~ 182 (330)
++|+.|+.+ +||||||||||||+||+.+|||.|+|++||+|++++.+. .||.|+.++++|++.|++
T Consensus 88 ~~~~~i~~~----------~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~ 153 (264)
T cd08201 88 NFFVNFYSP----------RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRR 153 (264)
T ss_pred ccceeeccC----------ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHH
Confidence 888887543 699999999999999999999999999999999988642 499999999999999999
Q ss_pred cCCCcccceeecc-ccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCCccChHHH
Q 020149 183 QGLDIVDLVALSG-SHTIGNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPTKFDNSYF 261 (330)
Q Consensus 183 ~Gl~~~dlVaLsG-aHTiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy 261 (330)
+||+++|||+||| |||||++||..|.++.-. + + ..+...++| .||.+|||+||
T Consensus 154 ~Gfs~~DmVaLsggaHTiG~ahc~~f~~~~~~--g------~-----------------~~~~~~p~d-stp~~FDn~~f 207 (264)
T cd08201 154 QGFSTSEMIALVACGHTLGGVHSEDFPEIVPP--G------S-----------------VPDTVLQFF-DTTIQFDNKVV 207 (264)
T ss_pred cCCChHHHheeecCCeeeeecccccchhhcCC--c------c-----------------ccCCCCCCC-CCccccchHHH
Confidence 9999999999995 999999999988776421 0 0 001134677 79999999999
Q ss_pred HHhhhcCC----------ccccchhhhcCChhHHHHHHHHhhCHHHHHHHHHHHHHHHhc
Q 020149 262 KNILASKG----------LLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMGN 311 (330)
Q Consensus 262 ~~l~~~~g----------ll~SD~~L~~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 311 (330)
.+++.+.. .+.||..++++|. ...++..| +++.|.+..+..+.||.+
T Consensus 208 ~E~l~g~~~~~L~~~~~~~~~sd~r~f~~d~--n~t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 208 TEYLSGTTNNPLVVGPNNTTNSDLRIFSSDG--NVTMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred HHHhcCCCCCceeecCCCCccchhhheecCc--cHHHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 99998752 3589999998543 23466677 799999999999999974
No 13
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=2.2e-48 Score=398.92 Aligned_cols=257 Identities=19% Similarity=0.265 Sum_probs=222.7
Q ss_pred HHHHHHHHHHHHhc--------chhhhhHHHHHhhccCc-------cCCC-ceEeecCCCCCcccccCCCCCCchhhHHH
Q 020149 44 EIVQCIVAKAVAKE--------TRMAASLLRLHFHDCFV-------KGCD-ASILLDSSGSIISEKRSNPNRNSARGFEV 107 (330)
Q Consensus 44 ~iV~~~v~~~~~~d--------~~~aa~llRL~FHDcfv-------~GCD-gSiLL~~~~~~~~E~~~~~N~~~~~g~~~ 107 (330)
+.|++.|++.+... ...+|-+|||+||++.+ |||+ |+|.+ .+|.+++.|.++.++..+
T Consensus 57 ~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf------~pe~~w~~N~gL~ka~~~ 130 (726)
T PRK15061 57 EALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRF------APLNSWPDNVNLDKARRL 130 (726)
T ss_pred HHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccC------cccccchhhhhHHHHHHH
Confidence 46888998888754 47999999999999997 8996 78876 469999999988889999
Q ss_pred HHHHHHHHhhhCCCCccHHHHHHHhhhhhhcccCCCceeccCCCCCCCCCCCC---------------------------
Q 020149 108 IDEIKSALEKECPQTVSCADILALAARDSTVLTGGPSWEVPLGRRDSKGASLS--------------------------- 160 (330)
Q Consensus 108 I~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~--------------------------- 160 (330)
++.||++.. ..||.||+|+||+..||+.+|||.+++..||.|...+...
T Consensus 131 L~pik~ky~----~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl~ 206 (726)
T PRK15061 131 LWPIKQKYG----NKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPLA 206 (726)
T ss_pred HHHHHHHhC----CCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccchh
Confidence 999999873 5799999999999999999999999999999998654321
Q ss_pred -----------CCCCCCCCCCCCHHHHHHHHHhcCCCcccceeec-cccccccccccccccccccCCCCCCCCCCCCHHH
Q 020149 161 -----------GSNNDIPAPNNTFQTILTKFKLQGLDIVDLVALS-GSHTIGNARCTSFRQRLYNQSGNGQPDNTLDESY 228 (330)
Q Consensus 161 -----------~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~ 228 (330)
+-...+|+|..++.+|++.|.+||||++|||||+ ||||||++||..|.+|| ++||.+++.+
T Consensus 207 a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl-------gpdP~~a~~~ 279 (726)
T PRK15061 207 AVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV-------GPEPEAAPIE 279 (726)
T ss_pred hhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc-------CCCCCcCHHH
Confidence 0012379999999999999999999999999995 99999999999999998 2799999999
Q ss_pred HHHHH--hcCCCCC-CCCCccccC---CCCCCccChHHHHHhhhc-----------------------------------
Q 020149 229 AAQLR--MGCPRSG-GDQNLFFLD---FVSPTKFDNSYFKNILAS----------------------------------- 267 (330)
Q Consensus 229 ~~~L~--~~Cp~~~-~~~~~~~~D---~~tp~~FDn~Yy~~l~~~----------------------------------- 267 (330)
++.|. +.||... .++....+| +.||++|||+||++|+.+
T Consensus 280 ~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~ 359 (726)
T PRK15061 280 EQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKH 359 (726)
T ss_pred HHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCccccccccc
Confidence 99985 8999742 233355678 579999999999999985
Q ss_pred -CCccccchhhhcCChhHHHHHHHHhhCHHHHHHHHHHHHHHHh--cCCCCCCC
Q 020149 268 -KGLLNSDQVLSTKNEASMELVKKYAENNDLFFQQFAKSMVKMG--NISPLTGN 318 (330)
Q Consensus 268 -~gll~SD~~L~~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~tg~ 318 (330)
.++|+||++|.. |++|+++|++||.|+++|+++|++||+||. .+|+++--
T Consensus 360 ~~~MLtSD~AL~~-DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry 412 (726)
T PRK15061 360 APTMLTTDLALRF-DPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRY 412 (726)
T ss_pred CcccccccHHhhc-CCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhh
Confidence 589999999999 999999999999999999999999999994 47766543
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=3.7e-38 Score=296.73 Aligned_cols=220 Identities=19% Similarity=0.271 Sum_probs=180.4
Q ss_pred HHHHHHHHhcchhhhhHHHHHhhccCc-------cCCCce-EeecCCCCCcccccCCCCCC--chhhHHHHHHHHHHHhh
Q 020149 48 CIVAKAVAKETRMAASLLRLHFHDCFV-------KGCDAS-ILLDSSGSIISEKRSNPNRN--SARGFEVIDEIKSALEK 117 (330)
Q Consensus 48 ~~v~~~~~~d~~~aa~llRL~FHDcfv-------~GCDgS-iLL~~~~~~~~E~~~~~N~~--~~~g~~~I~~iK~~le~ 117 (330)
+.+++.+.......+.||||+||++.+ ||++|+ |.+ .+|++++.|.+ +.+.+.+++.||++...
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl------~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL------APQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC------ccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 667778888778999999999999987 899999 766 46999999997 67899999999999852
Q ss_pred h-CCC-CccHHHHHHHhhhhhhcccCC-----CceeccCCCCCCCCCCCCCCC---CCCCCCC------------CCHHH
Q 020149 118 E-CPQ-TVSCADILALAARDSTVLTGG-----PSWEVPLGRRDSKGASLSGSN---NDIPAPN------------NTFQT 175 (330)
Q Consensus 118 ~-cp~-~VScADilalAar~AV~~~GG-----P~~~v~~GRrD~~~s~~~~~~---~~LP~p~------------~~~~~ 175 (330)
. -++ .||.||+|+||+..||+.+|| |.+++.+||.|...+.. +++ ..+|.+. .+.+.
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~t-d~~sf~~l~P~adg~rny~~~~~~~~~~~~ 169 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQT-DVESFEVLEPKADGFRNYLKKGYRVPPEEM 169 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCC-CcccccccCCCCcccccccccCCCCCHHHH
Confidence 2 122 699999999999999999999 99999999999987632 121 1234332 24478
Q ss_pred HHHHHHhcCCCcccceeecccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCC
Q 020149 176 ILTKFKLQGLDIVDLVALSGSH-TIGNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPT 254 (330)
Q Consensus 176 l~~~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~ 254 (330)
|++.|.++|||++|||||+||| ++|..|..+ +.|. ++ .+|.
T Consensus 170 Lrd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s-------~~G~---------------------------wT----~~p~ 211 (297)
T cd08200 170 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGS-------KHGV---------------------------FT----DRPG 211 (297)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCC-------CCCC---------------------------Cc----CCCC
Confidence 9999999999999999999998 699877321 1111 11 5899
Q ss_pred ccChHHHHHhhhcC--------------------C-----ccccchhhhcCChhHHHHHHHHhhC--HHHHHHHHHHHHH
Q 020149 255 KFDNSYFKNILASK--------------------G-----LLNSDQVLSTKNEASMELVKKYAEN--NDLFFQQFAKSMV 307 (330)
Q Consensus 255 ~FDn~Yy~~l~~~~--------------------g-----ll~SD~~L~~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~ 307 (330)
+|||.||++|+... | .+.+|..|.+ |++.|++|+.||.| +++|++||++||.
T Consensus 212 ~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~s-d~~~R~~ve~YA~dd~~~~F~~DF~~A~~ 290 (297)
T cd08200 212 VLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGS-NSELRAVAEVYASDDAQEKFVKDFVAAWT 290 (297)
T ss_pred ccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhcc-CHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 99999999999521 1 2678999999 99999999999998 9999999999999
Q ss_pred HHhcCC
Q 020149 308 KMGNIS 313 (330)
Q Consensus 308 Km~~lg 313 (330)
||+++.
T Consensus 291 Klmeld 296 (297)
T cd08200 291 KVMNLD 296 (297)
T ss_pred HHHhcC
Confidence 999875
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=3e-33 Score=288.94 Aligned_cols=221 Identities=20% Similarity=0.281 Sum_probs=177.0
Q ss_pred HHHHHHHH---HHHhcchhhhhHHHHHhhccCc-------cCCCce-EeecCCCCCcccccCCCC--CCchhhHHHHHHH
Q 020149 45 IVQCIVAK---AVAKETRMAASLLRLHFHDCFV-------KGCDAS-ILLDSSGSIISEKRSNPN--RNSARGFEVIDEI 111 (330)
Q Consensus 45 iV~~~v~~---~~~~d~~~aa~llRL~FHDcfv-------~GCDgS-iLL~~~~~~~~E~~~~~N--~~~~~g~~~I~~i 111 (330)
+|+++|.+ .+.......+.|||++||++.+ ||++|+ |.| .+|++++.| .++.+.+.+++.|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl------~pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRL------EPQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeec------chhcCcccCCHHHHHHHHHHHHHH
Confidence 34555544 4556667889999999999987 899998 877 469999999 6677899999999
Q ss_pred HHHHhhhCCCCccHHHHHHHhhhhhhccc---CCC--ceeccCCCCCCCCCCCCCCCCCCC-----CC----------CC
Q 020149 112 KSALEKECPQTVSCADILALAARDSTVLT---GGP--SWEVPLGRRDSKGASLSGSNNDIP-----AP----------NN 171 (330)
Q Consensus 112 K~~le~~cp~~VScADilalAar~AV~~~---GGP--~~~v~~GRrD~~~s~~~~~~~~LP-----~p----------~~ 171 (330)
|++... +.||.||+|+||+..|||.+ ||| .+++.+||.|...... +++...| +. ..
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCC
Confidence 998852 27999999999999999999 998 5788999999987642 2333222 11 12
Q ss_pred CHHHHHHHHHhcCCCcccceeeccc-cccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCC
Q 020149 172 TFQTILTKFKLQGLDIVDLVALSGS-HTIGNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDF 250 (330)
Q Consensus 172 ~~~~l~~~F~~~Gl~~~dlVaLsGa-HTiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~ 250 (330)
....|++.|..+|||+.|||||+|| |++|..|..+ +.|. + .
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s-------~~G~---------------------------~----T 620 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGS-------KHGV---------------------------F----T 620 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheecchhhccccCCCC-------CCCC---------------------------C----c
Confidence 3567899999999999999999999 5999988422 1110 1 1
Q ss_pred CCCCccChHHHHHhhhcC--------------------C---c--cccchhhhcCChhHHHHHHHHhhCH--HHHHHHHH
Q 020149 251 VSPTKFDNSYFKNILASK--------------------G---L--LNSDQVLSTKNEASMELVKKYAENN--DLFFQQFA 303 (330)
Q Consensus 251 ~tp~~FDn~Yy~~l~~~~--------------------g---l--l~SD~~L~~~d~~t~~~V~~yA~d~--~~F~~~Fa 303 (330)
.+|.+|||.||+||+... | + ..+|..|.+ |++.|++|+.||.|+ ++|++||+
T Consensus 621 ~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~s-d~~lra~aE~YA~dd~~~~F~~DF~ 699 (716)
T TIGR00198 621 DRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGS-NSILRAVAEVYAQDDAREKFVKDFV 699 (716)
T ss_pred CCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeecc-CHHHHHHHHHHhcccccchHHHHHH
Confidence 589999999999999731 1 2 268999999 999999999999997 89999999
Q ss_pred HHHHHHhcCCC
Q 020149 304 KSMVKMGNISP 314 (330)
Q Consensus 304 ~Am~Km~~lgv 314 (330)
+||.|+++++-
T Consensus 700 ~Aw~Klm~ldr 710 (716)
T TIGR00198 700 AAWTKVMNLDR 710 (716)
T ss_pred HHHHHHHhCCC
Confidence 99999999874
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=6.3e-33 Score=285.22 Aligned_cols=221 Identities=19% Similarity=0.301 Sum_probs=181.1
Q ss_pred HHHHHHHHhcchhhhhHHHHHhhccCc-------cCCCce-EeecCCCCCcccccCCCCC--CchhhHHHHHHHHHHHhh
Q 020149 48 CIVAKAVAKETRMAASLLRLHFHDCFV-------KGCDAS-ILLDSSGSIISEKRSNPNR--NSARGFEVIDEIKSALEK 117 (330)
Q Consensus 48 ~~v~~~~~~d~~~aa~llRL~FHDcfv-------~GCDgS-iLL~~~~~~~~E~~~~~N~--~~~~g~~~I~~iK~~le~ 117 (330)
..+++.+....-..+.|+|++||++.+ ||++|+ |.|. +|++++.|. ++.+.+++++.||++...
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 567777777778899999999999987 899999 8774 699999998 667899999999999864
Q ss_pred hC--CCCccHHHHHHHhhhhhhccc---CC--CceeccCCCCCCCCCCCCCCCC---CCCCCC------------CCHHH
Q 020149 118 EC--PQTVSCADILALAARDSTVLT---GG--PSWEVPLGRRDSKGASLSGSNN---DIPAPN------------NTFQT 175 (330)
Q Consensus 118 ~c--p~~VScADilalAar~AV~~~---GG--P~~~v~~GRrD~~~s~~~~~~~---~LP~p~------------~~~~~ 175 (330)
.- ...||.||+|+||+..|||.+ || |.+++.+||.|..... .+++. .+|.+. .....
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~-td~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQ-TDVESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCC-CCcccccccCCCCccccccccccCCCCHHHH
Confidence 32 136999999999999999998 68 9999999999998753 23332 456533 23478
Q ss_pred HHHHHHhcCCCcccceeecccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCC
Q 020149 176 ILTKFKLQGLDIVDLVALSGSH-TIGNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPT 254 (330)
Q Consensus 176 l~~~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~ 254 (330)
|++.|.++|||+.|||||+||| ++|..|-.+ +.| .+ ..+|.
T Consensus 595 L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S-------~~G---------------------------~~----T~~p~ 636 (726)
T PRK15061 595 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGS-------KHG---------------------------VF----TDRPG 636 (726)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCC-------CCC---------------------------CC----cCCCC
Confidence 9999999999999999999997 788877321 111 01 15899
Q ss_pred ccChHHHHHhhhcC--------------------C---c--cccchhhhcCChhHHHHHHHHhhC--HHHHHHHHHHHHH
Q 020149 255 KFDNSYFKNILASK--------------------G---L--LNSDQVLSTKNEASMELVKKYAEN--NDLFFQQFAKSMV 307 (330)
Q Consensus 255 ~FDn~Yy~~l~~~~--------------------g---l--l~SD~~L~~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~ 307 (330)
+|||.||+||+... | + +.+|..|.+ |++.|++|+.||.| +++|++||++||.
T Consensus 637 ~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgs-ds~lRa~aEvYA~dd~~~kF~~DF~~Aw~ 715 (726)
T PRK15061 637 VLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGS-NSQLRALAEVYASDDAKEKFVRDFVAAWT 715 (726)
T ss_pred ccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheeccc-CHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 99999999999521 1 1 478999999 99999999999999 9999999999999
Q ss_pred HHhcCCC
Q 020149 308 KMGNISP 314 (330)
Q Consensus 308 Km~~lgv 314 (330)
|+++++-
T Consensus 716 Kvmeldr 722 (726)
T PRK15061 716 KVMNLDR 722 (726)
T ss_pred HHHhCCC
Confidence 9999873
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.95 E-value=1.6e-27 Score=235.70 Aligned_cols=237 Identities=20% Similarity=0.271 Sum_probs=189.2
Q ss_pred hhhhhHHHHHhhccCc-------cCCCceEeecCCCCCcccccCCCCCCchhhHHHHHHHHHHHhhhCCCCccHHHHHHH
Q 020149 59 RMAASLLRLHFHDCFV-------KGCDASILLDSSGSIISEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILAL 131 (330)
Q Consensus 59 ~~aa~llRL~FHDcfv-------~GCDgSiLL~~~~~~~~E~~~~~N~~~~~g~~~I~~iK~~le~~cp~~VScADilal 131 (330)
...|-+|||+||-+.+ +|..+. ..++.++.++|.|.++.+++.++..||++.. ..+|.||++.|
T Consensus 93 hYGplfIRmAWHsAGTYRi~DGRGGa~~G-----~qRFaPlnSWPDN~nLDKarRLLWPIKkKYG----~kiSWaDL~iL 163 (730)
T COG0376 93 HYGPLFIRMAWHSAGTYRIGDGRGGAGGG-----QQRFAPLNSWPDNANLDKARRLLWPIKKKYG----RKISWADLIIL 163 (730)
T ss_pred ccccceeeeeecccCceecccCCCCCCCC-----ceecccccCCCcccchHHHHHHhhhHhHhhc----ccccHhHhhhh
Confidence 4789999999999986 343332 1245678999999988899999999999874 58999999999
Q ss_pred hhhhhhcccCCCceeccCCCCCCCCCCC--------------------------------------CCCCCCCCCCCCCH
Q 020149 132 AARDSTVLTGGPSWEVPLGRRDSKGASL--------------------------------------SGSNNDIPAPNNTF 173 (330)
Q Consensus 132 Aar~AV~~~GGP~~~v~~GRrD~~~s~~--------------------------------------~~~~~~LP~p~~~~ 173 (330)
|+..|++.+|++.+.+..||.|-..+.. .+ ....|+|..+.
T Consensus 164 aGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGLIYVNPEG-png~PDpl~aA 242 (730)
T COG0376 164 AGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGLIYVNPEG-PNGNPDPLAAA 242 (730)
T ss_pred hchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheeeeEEeCCCC-CCCCCChhhhH
Confidence 9999999999999999999999877754 22 23589999999
Q ss_pred HHHHHHHHhcCCCcccceeec-cccccccccccccccccccCCCCCCCCCCCCHHHHHHHHh--cCCCCCCCCC-cccc-
Q 020149 174 QTILTKFKLQGLDIVDLVALS-GSHTIGNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRM--GCPRSGGDQN-LFFL- 248 (330)
Q Consensus 174 ~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~--~Cp~~~~~~~-~~~~- 248 (330)
.+++..|++|+++++|.|||+ ||||+|.+|...-.+.+ +++|.-.+--.+.|-. .|....+..+ +..+
T Consensus 243 ~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v-------g~ePe~a~ie~qGlGW~~~~g~G~G~dtitsGlE 315 (730)
T COG0376 243 RDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV-------GPEPEAAPIEQQGLGWANTYGSGKGPDTITSGLE 315 (730)
T ss_pred HHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc-------CCCccccchhhhccccccccCCCcCccccccccc
Confidence 999999999999999999997 69999999966422221 3677655555555543 3433222211 1112
Q ss_pred --CCCCCCccChHHHHHhhhcC-----------------------------------CccccchhhhcCChhHHHHHHHH
Q 020149 249 --DFVSPTKFDNSYFKNILASK-----------------------------------GLLNSDQVLSTKNEASMELVKKY 291 (330)
Q Consensus 249 --D~~tp~~FDn~Yy~~l~~~~-----------------------------------gll~SD~~L~~~d~~t~~~V~~y 291 (330)
-..||++|||+||.+|+... .+|++|.+|.- ||..+++.++|
T Consensus 316 ~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDlaLr~-DP~Y~kIs~rf 394 (730)
T COG0376 316 GAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDLALRF-DPEYEKISRRF 394 (730)
T ss_pred ccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccchhhhc-ChHHHHHHHHH
Confidence 13699999999999998641 37999999999 99999999999
Q ss_pred hhCHHHHHHHHHHHHHHHhcCC
Q 020149 292 AENNDLFFQQFAKSMVKMGNIS 313 (330)
Q Consensus 292 A~d~~~F~~~Fa~Am~Km~~lg 313 (330)
..|++.|.+.|++||.||..-+
T Consensus 395 ~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 395 LEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred HhCHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999998644
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.54 E-value=8.6e-14 Score=138.89 Aligned_cols=216 Identities=22% Similarity=0.341 Sum_probs=161.3
Q ss_pred HHHHHHHHhcchhhhhHHHHHhhccCc-------cCCCce-EeecCCCCCcccccCCCCCC--chhhHHHHHHHHHHHhh
Q 020149 48 CIVAKAVAKETRMAASLLRLHFHDCFV-------KGCDAS-ILLDSSGSIISEKRSNPNRN--SARGFEVIDEIKSALEK 117 (330)
Q Consensus 48 ~~v~~~~~~d~~~aa~llRL~FHDcfv-------~GCDgS-iLL~~~~~~~~E~~~~~N~~--~~~g~~~I~~iK~~le~ 117 (330)
..+++.|....-....|+-.+|-.+-+ +|.+|. |.|. ++++++-|.. +.+.+.+++.|.+.+.
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 456777777777888999999998876 788886 7674 6899999963 3468889999998887
Q ss_pred hCCCCccHHHHHHHhhhhhhccc---CCCce--eccCCCCCCCCCCCCCCCCC--C-C--CCC----------CCHHHHH
Q 020149 118 ECPQTVSCADILALAARDSTVLT---GGPSW--EVPLGRRDSKGASLSGSNND--I-P--APN----------NTFQTIL 177 (330)
Q Consensus 118 ~cp~~VScADilalAar~AV~~~---GGP~~--~v~~GRrD~~~s~~~~~~~~--L-P--~p~----------~~~~~l~ 177 (330)
..||.||+|+|++..+|+.+ +|-.+ ++..||.|...... +++.- | | +.+ .+-.-|+
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqt-Dv~sf~~LeP~aDGfRNy~~~~~~~~pe~~Lv 600 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQT-DVESFAVLEPIADGFRNYVKKDYVLTPEELLV 600 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhc-chhhhhcccccchhhhhhccCCCcCCHHHHHH
Confidence 47999999999999999886 67654 66799999876642 22111 1 1 111 1234578
Q ss_pred HHHHhcCCCcccceeecccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCccccCCCCCCcc
Q 020149 178 TKFKLQGLDIVDLVALSGSH-TIGNARCTSFRQRLYNQSGNGQPDNTLDESYAAQLRMGCPRSGGDQNLFFLDFVSPTKF 256 (330)
Q Consensus 178 ~~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~Rl~n~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~F 256 (330)
+.-+-.+||..||++|.||- -+|. |++| ....+..| .|.++
T Consensus 601 DkAqlL~LtapemtVLiGGlRvLg~-----------n~g~-------------------------s~~GVfT~--~pg~L 642 (730)
T COG0376 601 DKAQLLTLTAPEMTVLIGGLRVLGA-----------NYGG-------------------------SKHGVFTD--RPGVL 642 (730)
T ss_pred HHHHHhccCCccceEEEcceEeecc-----------CCCC-------------------------Cccceecc--Ccccc
Confidence 88888999999999999875 3333 2222 12234444 68888
Q ss_pred ChHHHHHhhhcC----------Cc---------------cccchhhhcCChhHHHHHHHHhhC--HHHHHHHHHHHHHHH
Q 020149 257 DNSYFKNILASK----------GL---------------LNSDQVLSTKNEASMELVKKYAEN--NDLFFQQFAKSMVKM 309 (330)
Q Consensus 257 Dn~Yy~~l~~~~----------gl---------------l~SD~~L~~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km 309 (330)
.|.||.||+... ++ -..|..+-+ ++..|.+.+.||.| ++.|.+||++||.|.
T Consensus 643 tndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGs-ns~LRA~aEVYa~dda~ekFv~DFvaaw~kV 721 (730)
T COG0376 643 TNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGS-NSELRALAEVYASDDAKEKFVKDFVAAWTKV 721 (730)
T ss_pred cchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecC-cHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 899999998641 11 246777777 99999999999975 899999999999999
Q ss_pred hcCC
Q 020149 310 GNIS 313 (330)
Q Consensus 310 ~~lg 313 (330)
.++.
T Consensus 722 Mn~D 725 (730)
T COG0376 722 MNLD 725 (730)
T ss_pred hccc
Confidence 9875
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=58.91 E-value=95 Score=30.66 Aligned_cols=48 Identities=15% Similarity=0.056 Sum_probs=28.6
Q ss_pred cCCCceeccCCCCCCCCCCCCCCCCCCCCC---CCCHHHHHHHHHhcCCCc
Q 020149 140 TGGPSWEVPLGRRDSKGASLSGSNNDIPAP---NNTFQTILTKFKLQGLDI 187 (330)
Q Consensus 140 ~GGP~~~v~~GRrD~~~s~~~~~~~~LP~p---~~~~~~l~~~F~~~Gl~~ 187 (330)
+|-..+..+.||-+...-.........+.. -..+.++...|++.|+..
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T 230 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKT 230 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCe
Confidence 377778999999865432111111111211 235778888999999865
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=47.22 E-value=17 Score=28.52 Aligned_cols=18 Identities=17% Similarity=0.244 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHhcCCCC
Q 020149 298 FFQQFAKSMVKMGNISPL 315 (330)
Q Consensus 298 F~~~Fa~Am~Km~~lgv~ 315 (330)
...+|..||.||+.||..
T Consensus 3 m~~~F~~am~KlavLG~d 20 (80)
T PF11895_consen 3 MQSAFKAAMAKLAVLGHD 20 (80)
T ss_dssp HHHHHHHHHHHHCTTTS-
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 467899999999999863
No 21
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.54 E-value=81 Score=24.14 Aligned_cols=28 Identities=11% Similarity=0.265 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhcchhhhhHHHHHhhcc
Q 020149 45 IVQCIVAKAVAKETRMAASLLRLHFHDC 72 (330)
Q Consensus 45 iV~~~v~~~~~~d~~~aa~llRL~FHDc 72 (330)
|.|+.+++.++++|.+-+..||+.+---
T Consensus 24 iark~~~k~lk~NPpine~~iR~M~~qm 51 (71)
T COG3763 24 IARKQMKKQLKDNPPINEEMIRMMMAQM 51 (71)
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHh
Confidence 8899999999999999999999998754
No 22
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=36.17 E-value=28 Score=29.87 Aligned_cols=33 Identities=30% Similarity=0.479 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHhcCCCcccc-eeecccccccccc
Q 020149 171 NTFQTILTKFKLQGLDIVDL-VALSGSHTIGNAR 203 (330)
Q Consensus 171 ~~~~~l~~~F~~~Gl~~~dl-VaLsGaHTiG~~h 203 (330)
+++.+.+-.|++|||++.++ |.|--+|-||++.
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r 64 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVR 64 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeecccCcchhh
Confidence 45677788999999999887 5566999999876
No 23
>PRK00523 hypothetical protein; Provisional
Probab=26.29 E-value=87 Score=24.10 Aligned_cols=28 Identities=7% Similarity=0.304 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhcchhhhhHHHHHhhcc
Q 020149 45 IVQCIVAKAVAKETRMAASLLRLHFHDC 72 (330)
Q Consensus 45 iV~~~v~~~~~~d~~~aa~llRL~FHDc 72 (330)
+-|+.+++.++++|.+-...||..+---
T Consensus 25 iark~~~k~l~~NPpine~mir~M~~QM 52 (72)
T PRK00523 25 VSKKMFKKQIRENPPITENMIRAMYMQM 52 (72)
T ss_pred HHHHHHHHHHHHCcCCCHHHHHHHHHHh
Confidence 6689999999999999999999988744
No 24
>KOG4252 consensus GTP-binding protein [Signal transduction mechanisms]
Probab=22.46 E-value=70 Score=29.27 Aligned_cols=38 Identities=29% Similarity=0.374 Sum_probs=29.7
Q ss_pred hccCc----cCCCceEeecCCCCCcccccCCCCCCchhhHHHHHHHHHHHhhhCC
Q 020149 70 HDCFV----KGCDASILLDSSGSIISEKRSNPNRNSARGFEVIDEIKSALEKECP 120 (330)
Q Consensus 70 HDcfv----~GCDgSiLL~~~~~~~~E~~~~~N~~~~~g~~~I~~iK~~le~~cp 120 (330)
|||.+ +|.-||+|..++. -.--||.+-.++.+++++|.
T Consensus 82 fDaItkAyyrgaqa~vLVFSTT-------------Dr~SFea~~~w~~kv~~e~~ 123 (246)
T KOG4252|consen 82 FDAITKAYYRGAQASVLVFSTT-------------DRYSFEATLEWYNKVQKETE 123 (246)
T ss_pred HHHHHHHHhccccceEEEEecc-------------cHHHHHHHHHHHHHHHHHhc
Confidence 67775 8999999987642 12359999999999999883
No 25
>PF06387 Calcyon: D1 dopamine receptor-interacting protein (calcyon); InterPro: IPR009431 This family consists of several D1 dopamine receptor-interacting (calcyon) proteins. D1/D5 dopamine receptors in the basal ganglia, hippocampus, and cerebral cortex modulate motor, reward, and cognitive behaviour. D1-like dopamine receptors likely modulate neocortical and hippocampal neuronal excitability and synaptic function via Ca2+ as well as cAMP-dependent signalling []. Defective calcyon proteins have been implicated in both attention-deficit/hyperactivity disorder (ADHD) [] and schizophrenia.; GO: 0050780 dopamine receptor binding, 0007212 dopamine receptor signaling pathway, 0016021 integral to membrane
Probab=21.74 E-value=78 Score=28.47 Aligned_cols=12 Identities=42% Similarity=0.983 Sum_probs=9.3
Q ss_pred cchhcccCchHH
Q 020149 32 PQFYDHSCPKAQ 43 (330)
Q Consensus 32 ~~fY~~sCP~~e 43 (330)
.=+|+.+||+..
T Consensus 106 a~wYDqsCPdGF 117 (186)
T PF06387_consen 106 AIWYDQSCPDGF 117 (186)
T ss_pred eeeecccCCCcc
Confidence 347888999874
No 26
>PRK01844 hypothetical protein; Provisional
Probab=20.12 E-value=1.4e+02 Score=23.05 Aligned_cols=28 Identities=11% Similarity=0.242 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhcchhhhhHHHHHhhcc
Q 020149 45 IVQCIVAKAVAKETRMAASLLRLHFHDC 72 (330)
Q Consensus 45 iV~~~v~~~~~~d~~~aa~llRL~FHDc 72 (330)
+-|+.+++.++++|.+-...||..|---
T Consensus 24 ~ark~~~k~lk~NPpine~mir~Mm~QM 51 (72)
T PRK01844 24 IARKYMMNYLQKNPPINEQMLKMMMMQM 51 (72)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHh
Confidence 6689999999999999999999988754
Done!