Query 020151
Match_columns 330
No_of_seqs 186 out of 206
Neff 4.7
Searched_HMMs 46136
Date Fri Mar 29 07:25:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020151.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020151hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0027 Calmodulin and related 99.5 6E-14 1.3E-18 121.0 11.6 143 10-195 3-148 (151)
2 COG5126 FRQ1 Ca2+-binding prot 99.4 1.1E-12 2.3E-17 116.8 11.8 141 7-195 12-155 (160)
3 PTZ00183 centrin; Provisional 99.4 7.1E-12 1.5E-16 105.5 12.7 140 10-196 12-154 (158)
4 PTZ00184 calmodulin; Provision 99.4 1.1E-11 2.5E-16 102.6 13.5 137 12-195 8-147 (149)
5 KOG0027 Calmodulin and related 99.3 1E-11 2.2E-16 107.1 8.9 122 126-288 8-129 (151)
6 PTZ00183 centrin; Provisional 99.0 4.3E-09 9.3E-14 88.6 12.9 138 56-269 17-154 (158)
7 KOG0034 Ca2+/calmodulin-depend 99.0 1.9E-09 4.2E-14 98.1 10.3 143 7-196 25-175 (187)
8 PTZ00184 calmodulin; Provision 99.0 3E-09 6.5E-14 88.1 9.4 105 127-273 12-116 (149)
9 KOG0031 Myosin regulatory ligh 99.0 8E-09 1.7E-13 91.9 12.4 139 6-195 23-164 (171)
10 KOG0037 Ca2+-binding protein, 99.0 5E-09 1.1E-13 97.3 10.8 100 127-274 58-157 (221)
11 COG5126 FRQ1 Ca2+-binding prot 98.9 5E-09 1.1E-13 93.4 9.3 106 124-272 18-123 (160)
12 PF13499 EF-hand_7: EF-hand do 98.9 9.2E-10 2E-14 81.6 3.9 65 128-194 2-66 (66)
13 KOG0037 Ca2+-binding protein, 98.9 3.8E-08 8.2E-13 91.5 14.4 150 16-261 58-210 (221)
14 KOG0028 Ca2+-binding protein ( 98.8 3.9E-08 8.5E-13 87.9 10.7 132 18-196 36-170 (172)
15 cd05025 S-100A1 S-100A1: S-100 98.7 3.6E-08 7.7E-13 78.7 7.6 69 128-198 11-82 (92)
16 cd05026 S-100Z S-100Z: S-100Z 98.7 6.8E-08 1.5E-12 78.0 8.7 70 128-199 12-84 (93)
17 cd05022 S-100A13 S-100A13: S-1 98.7 9.8E-08 2.1E-12 77.2 8.4 72 127-203 9-82 (89)
18 KOG0044 Ca2+ sensor (EF-Hand s 98.7 2.4E-07 5.2E-12 85.0 11.3 131 28-198 41-177 (193)
19 cd00052 EH Eps15 homology doma 98.6 1.7E-07 3.7E-12 68.7 7.9 63 129-199 2-64 (67)
20 cd05031 S-100A10_like S-100A10 98.5 1.7E-07 3.6E-12 75.2 6.4 70 127-198 9-81 (94)
21 cd05027 S-100B S-100B: S-100B 98.5 5.7E-07 1.2E-11 72.3 8.2 71 127-199 9-82 (88)
22 smart00027 EH Eps15 homology d 98.4 8.4E-07 1.8E-11 71.3 7.9 73 126-210 10-82 (96)
23 KOG4223 Reticulocalbin, calume 98.4 7.6E-07 1.6E-11 86.9 9.0 187 19-273 81-273 (325)
24 cd05023 S-100A11 S-100A11: S-1 98.4 8.2E-07 1.8E-11 71.6 7.7 70 128-198 11-82 (89)
25 PLN02964 phosphatidylserine de 98.4 6.1E-07 1.3E-11 94.9 8.3 101 126-270 143-244 (644)
26 cd05029 S-100A6 S-100A6: S-100 98.4 1.2E-06 2.6E-11 70.5 8.0 70 128-200 12-83 (88)
27 KOG0036 Predicted mitochondria 98.4 1.8E-06 4E-11 86.7 10.2 67 125-196 13-79 (463)
28 cd00252 SPARC_EC SPARC_EC; ext 98.4 4.3E-06 9.4E-11 70.9 10.7 62 124-195 46-107 (116)
29 KOG0036 Predicted mitochondria 98.4 2.3E-06 4.9E-11 86.1 10.5 146 19-216 18-170 (463)
30 KOG0044 Ca2+ sensor (EF-Hand s 98.3 2.3E-06 5E-11 78.6 8.4 150 55-268 25-174 (193)
31 PF13833 EF-hand_8: EF-hand do 98.3 1.9E-06 4.2E-11 61.7 5.9 53 139-196 1-53 (54)
32 KOG0028 Ca2+-binding protein ( 98.3 5.6E-06 1.2E-10 74.3 9.9 100 126-267 33-132 (172)
33 cd00051 EFh EF-hand, calcium b 98.3 3E-06 6.4E-11 58.8 6.6 61 128-194 2-62 (63)
34 cd00213 S-100 S-100: S-100 dom 98.3 4E-06 8.7E-11 65.9 7.9 70 127-198 9-81 (88)
35 KOG0031 Myosin regulatory ligh 98.2 8.8E-06 1.9E-10 72.7 10.3 96 128-269 34-129 (171)
36 KOG0034 Ca2+/calmodulin-depend 98.1 6.1E-05 1.3E-09 68.8 14.0 138 60-269 37-175 (187)
37 PF13499 EF-hand_7: EF-hand do 98.1 8.5E-06 1.8E-10 60.2 6.1 65 170-267 2-66 (66)
38 cd05030 calgranulins Calgranul 98.1 1.6E-05 3.5E-10 63.5 7.5 71 128-199 10-82 (88)
39 KOG0377 Protein serine/threoni 98.1 8E-06 1.7E-10 83.0 6.8 158 8-197 446-616 (631)
40 KOG4223 Reticulocalbin, calume 98.0 2.5E-05 5.4E-10 76.5 8.2 145 19-224 167-318 (325)
41 cd05024 S-100A10 S-100A10: A s 97.8 6.8E-05 1.5E-09 61.4 7.6 69 128-199 10-79 (91)
42 KOG0030 Myosin essential light 97.8 0.00019 4.2E-09 63.3 10.6 137 13-193 9-148 (152)
43 KOG2643 Ca2+ binding protein, 97.6 0.00045 9.8E-09 70.3 11.0 217 19-289 237-474 (489)
44 KOG0041 Predicted Ca2+-binding 97.6 0.00038 8.3E-09 64.9 8.9 109 84-198 53-165 (244)
45 KOG0030 Myosin essential light 97.6 0.00035 7.5E-09 61.7 8.2 106 126-271 11-118 (152)
46 PF00036 EF-hand_1: EF hand; 97.5 9.3E-05 2E-09 48.3 3.2 28 128-155 2-29 (29)
47 PRK12309 transaldolase/EF-hand 97.5 0.00058 1.3E-08 68.8 9.9 62 118-198 326-387 (391)
48 PLN02964 phosphatidylserine de 97.4 0.00086 1.9E-08 71.5 10.9 125 28-197 118-244 (644)
49 PF00036 EF-hand_1: EF hand; 97.4 0.00016 3.4E-09 47.2 2.6 27 170-196 2-28 (29)
50 cd05026 S-100Z S-100Z: S-100Z 97.3 0.0012 2.6E-08 53.3 7.6 66 170-267 12-79 (93)
51 PF10591 SPARC_Ca_bdg: Secrete 97.3 0.00025 5.5E-09 59.7 3.9 102 80-192 8-112 (113)
52 PF13405 EF-hand_6: EF-hand do 97.2 0.00032 6.8E-09 45.6 3.0 29 128-156 2-31 (31)
53 KOG0038 Ca2+-binding kinase in 97.2 0.0011 2.4E-08 59.3 7.3 105 57-195 72-176 (189)
54 cd00051 EFh EF-hand, calcium b 97.2 0.00098 2.1E-08 45.9 5.3 61 170-267 2-62 (63)
55 KOG2643 Ca2+ binding protein, 97.2 0.0044 9.5E-08 63.3 11.8 174 23-267 208-382 (489)
56 cd05022 S-100A13 S-100A13: S-1 97.1 0.0026 5.6E-08 51.6 7.6 63 170-267 10-73 (89)
57 cd05025 S-100A1 S-100A1: S-100 97.1 0.0038 8.2E-08 49.7 8.3 66 170-267 11-78 (92)
58 PF13202 EF-hand_5: EF hand; P 97.0 0.00064 1.4E-08 42.8 2.8 24 128-151 1-24 (25)
59 PF14658 EF-hand_9: EF-hand do 97.0 0.00096 2.1E-08 51.8 4.1 62 130-196 2-64 (66)
60 cd00052 EH Eps15 homology doma 97.0 0.0026 5.6E-08 46.3 6.1 59 20-94 4-65 (67)
61 KOG0040 Ca2+-binding actin-bun 96.9 0.0041 9E-08 70.9 9.9 104 128-267 2255-2359(2399)
62 smart00027 EH Eps15 homology d 96.9 0.0026 5.7E-08 51.0 5.8 68 12-95 7-77 (96)
63 cd05031 S-100A10_like S-100A10 96.8 0.0067 1.4E-07 48.5 8.0 67 170-268 10-78 (94)
64 cd05023 S-100A11 S-100A11: S-1 96.8 0.0054 1.2E-07 49.4 7.5 66 170-267 11-78 (89)
65 PF12763 EF-hand_4: Cytoskelet 96.8 0.0055 1.2E-07 51.1 7.4 69 128-205 12-80 (104)
66 KOG0377 Protein serine/threoni 96.8 0.0042 9.2E-08 63.7 7.7 132 106-269 444-575 (631)
67 PRK12309 transaldolase/EF-hand 96.7 0.011 2.4E-07 59.8 10.2 103 78-267 281-383 (391)
68 PF13202 EF-hand_5: EF hand; P 96.6 0.0021 4.6E-08 40.4 2.6 25 170-194 1-25 (25)
69 cd05029 S-100A6 S-100A6: S-100 96.6 0.0075 1.6E-07 48.5 6.4 72 14-94 9-83 (88)
70 cd00252 SPARC_EC SPARC_EC; ext 96.5 0.0047 1E-07 52.5 5.1 56 17-89 50-107 (116)
71 cd05027 S-100B S-100B: S-100B 96.5 0.0095 2.1E-07 47.9 6.4 73 14-94 7-83 (88)
72 PF13405 EF-hand_6: EF-hand do 96.3 0.0033 7.2E-08 40.7 2.6 27 241-268 1-27 (31)
73 KOG4251 Calcium binding protei 96.2 0.013 2.8E-07 56.6 6.5 200 17-275 103-315 (362)
74 PF13833 EF-hand_8: EF-hand do 96.1 0.017 3.6E-07 41.2 5.5 50 28-90 2-53 (54)
75 KOG2562 Protein phosphatase 2 96.1 0.025 5.3E-07 58.3 8.5 134 19-192 282-420 (493)
76 cd00213 S-100 S-100: S-100 dom 96.1 0.029 6.4E-07 43.8 7.2 66 170-267 10-77 (88)
77 cd05030 calgranulins Calgranul 96.0 0.013 2.9E-07 46.7 4.9 70 13-93 6-82 (88)
78 KOG4065 Uncharacterized conser 95.8 0.017 3.6E-07 50.1 5.0 64 130-193 71-142 (144)
79 KOG2562 Protein phosphatase 2 95.7 0.035 7.5E-07 57.2 7.6 189 19-267 143-377 (493)
80 PF14788 EF-hand_10: EF hand; 95.6 0.032 6.9E-07 41.4 5.3 50 142-197 1-50 (51)
81 PF12763 EF-hand_4: Cytoskelet 95.4 0.043 9.2E-07 45.8 6.1 75 13-103 8-84 (104)
82 KOG0751 Mitochondrial aspartat 94.8 0.14 3E-06 53.6 8.9 141 78-267 65-205 (694)
83 KOG0046 Ca2+-binding actin-bun 94.8 0.045 9.8E-07 57.3 5.4 71 127-201 20-90 (627)
84 cd05024 S-100A10 S-100A10: A s 94.6 0.12 2.7E-06 42.4 6.5 74 14-95 7-81 (91)
85 smart00054 EFh EF-hand, calciu 94.4 0.047 1E-06 31.8 2.9 27 170-196 2-28 (29)
86 smart00054 EFh EF-hand, calciu 93.8 0.087 1.9E-06 30.6 3.2 27 128-154 2-28 (29)
87 KOG4666 Predicted phosphate ac 93.6 0.14 3E-06 51.2 5.8 106 126-274 259-364 (412)
88 PF05042 Caleosin: Caleosin re 92.9 0.79 1.7E-05 41.9 9.2 110 127-267 8-164 (174)
89 KOG0040 Ca2+-binding actin-bun 92.5 0.41 8.9E-06 55.6 8.2 138 12-192 2250-2394(2399)
90 KOG0169 Phosphoinositide-speci 92.4 0.36 7.7E-06 52.5 7.3 118 124-301 134-251 (746)
91 KOG1029 Endocytic adaptor prot 92.3 1.3 2.8E-05 48.7 11.3 153 19-195 20-256 (1118)
92 KOG0751 Mitochondrial aspartat 90.9 1.7 3.8E-05 45.8 10.1 114 23-159 83-212 (694)
93 KOG4251 Calcium binding protei 90.1 0.4 8.8E-06 46.5 4.4 71 123-196 98-168 (362)
94 PF14658 EF-hand_9: EF-hand do 89.8 1 2.2E-05 35.1 5.7 60 20-91 3-65 (66)
95 KOG0041 Predicted Ca2+-binding 89.1 0.54 1.2E-05 44.4 4.3 72 13-101 97-171 (244)
96 PF10591 SPARC_Ca_bdg: Secrete 88.4 0.11 2.3E-06 43.8 -0.7 52 19-85 58-111 (113)
97 KOG1707 Predicted Ras related/ 85.4 1.8 3.9E-05 46.3 6.1 140 12-197 192-344 (625)
98 PF09279 EF-hand_like: Phospho 83.1 3 6.5E-05 32.3 5.1 63 128-195 2-68 (83)
99 KOG4578 Uncharacterized conser 82.9 0.36 7.7E-06 48.4 -0.2 103 76-195 294-397 (421)
100 KOG3555 Ca2+-binding proteogly 82.8 1.3 2.8E-05 44.8 3.6 59 127-196 251-310 (434)
101 KOG0046 Ca2+-binding actin-bun 82.1 2.3 5.1E-05 45.0 5.3 71 12-94 16-89 (627)
102 KOG3866 DNA-binding protein of 81.3 1.4 2.9E-05 44.2 3.1 63 130-193 248-321 (442)
103 KOG0042 Glycerol-3-phosphate d 81.2 1.8 3.8E-05 46.3 4.1 65 129-199 596-660 (680)
104 cd07313 terB_like_2 tellurium 77.7 4.5 9.7E-05 32.4 4.6 85 140-266 13-97 (104)
105 PF14788 EF-hand_10: EF hand; 76.3 7.4 0.00016 29.0 5.0 48 30-90 1-49 (51)
106 KOG4666 Predicted phosphate ac 75.9 5.9 0.00013 40.0 5.7 104 53-196 255-359 (412)
107 PRK09430 djlA Dna-J like membr 69.1 21 0.00045 34.4 7.6 101 25-165 67-167 (267)
108 KOG1955 Ral-GTPase effector RA 67.9 6.7 0.00015 41.6 4.2 62 126-195 231-292 (737)
109 KOG0998 Synaptic vesicle prote 67.4 5.1 0.00011 44.6 3.5 161 19-204 133-353 (847)
110 KOG0038 Ca2+-binding kinase in 67.2 55 0.0012 29.9 9.3 101 161-267 64-175 (189)
111 KOG2304 3-hydroxyacyl-CoA dehy 65.5 80 0.0017 30.9 10.6 152 129-314 112-275 (298)
112 PF09069 EF-hand_3: EF-hand; 64.5 45 0.00098 27.4 7.7 70 169-267 4-73 (90)
113 PF14425 Imm3: Immunity protei 55.0 34 0.00073 29.6 5.6 93 115-210 18-111 (117)
114 KOG4004 Matricellular protein 52.9 20 0.00043 34.1 4.2 97 81-194 141-248 (259)
115 KOG1707 Predicted Ras related/ 52.0 63 0.0014 35.1 8.1 164 126-310 195-392 (625)
116 TIGR03280 methan_mark_11 putat 51.1 25 0.00055 34.6 4.8 85 187-296 202-287 (292)
117 cd07176 terB tellurite resista 50.0 47 0.001 26.2 5.5 86 140-265 16-101 (111)
118 PF12174 RST: RCD1-SRO-TAF4 (R 47.4 54 0.0012 25.7 5.2 49 142-199 8-56 (70)
119 PF05099 TerB: Tellurite resis 46.3 9 0.0002 32.0 0.8 83 140-264 37-119 (140)
120 KOG1029 Endocytic adaptor prot 45.4 44 0.00096 37.4 5.9 64 130-202 20-83 (1118)
121 KOG4065 Uncharacterized conser 45.2 53 0.0012 28.9 5.3 62 19-87 71-142 (144)
122 TIGR01828 pyru_phos_dikin pyru 45.1 5.1E+02 0.011 29.4 14.3 140 49-199 31-184 (856)
123 KOG0035 Ca2+-binding actin-bun 43.7 60 0.0013 36.7 6.7 70 126-196 747-816 (890)
124 KOG4286 Dystrophin-like protei 42.1 2.9E+02 0.0063 31.2 11.3 161 54-267 418-578 (966)
125 PF09069 EF-hand_3: EF-hand; 42.1 96 0.0021 25.5 6.1 65 129-196 6-75 (90)
126 PRK09279 pyruvate phosphate di 40.5 5.6E+02 0.012 29.2 13.7 139 50-204 38-195 (879)
127 cd07316 terB_like_DjlA N-termi 40.3 1.1E+02 0.0024 24.1 6.3 85 140-265 13-97 (106)
128 KOG0998 Synaptic vesicle prote 39.7 28 0.00061 38.9 3.5 154 19-200 15-194 (847)
129 PF09068 EF-hand_2: EF hand; 39.4 97 0.0021 26.7 6.1 82 168-268 41-124 (127)
130 PF05042 Caleosin: Caleosin re 37.9 82 0.0018 29.0 5.6 39 230-276 93-131 (174)
131 cd07316 terB_like_DjlA N-termi 36.9 2.1E+02 0.0045 22.5 7.9 92 26-157 12-103 (106)
132 PF08726 EFhand_Ca_insen: Ca2+ 36.4 29 0.00063 27.2 2.2 25 127-152 7-31 (69)
133 PF05099 TerB: Tellurite resis 35.7 20 0.00043 29.9 1.3 41 122-165 94-134 (140)
134 PF09279 EF-hand_like: Phospho 35.6 35 0.00076 26.2 2.6 26 241-268 1-26 (83)
135 KOG2243 Ca2+ release channel ( 35.2 56 0.0012 39.2 4.8 84 130-226 4061-4148(5019)
136 PRK13239 alkylmercury lyase; P 33.8 74 0.0016 29.9 4.8 103 163-309 17-132 (206)
137 COG0634 Hpt Hypoxanthine-guani 32.6 79 0.0017 29.2 4.7 38 77-114 10-48 (178)
138 KOG3555 Ca2+-binding proteogly 32.5 59 0.0013 33.3 4.1 100 128-271 213-312 (434)
139 KOG1954 Endocytosis/signaling 32.0 84 0.0018 32.8 5.2 57 126-191 444-500 (532)
140 KOG4578 Uncharacterized conser 31.8 37 0.00079 34.5 2.6 40 115-154 359-398 (421)
141 KOG0169 Phosphoinositide-speci 31.7 6.9E+02 0.015 28.1 12.3 99 55-197 135-233 (746)
142 PF05517 p25-alpha: p25-alpha 31.0 2.3E+02 0.0049 25.0 7.2 56 140-199 16-72 (154)
143 PRK06035 3-hydroxyacyl-CoA deh 29.6 2.2E+02 0.0049 26.9 7.5 136 142-313 123-262 (291)
144 PRK09430 djlA Dna-J like membr 29.3 96 0.0021 29.8 4.9 70 123-198 53-122 (267)
145 cd07313 terB_like_2 tellurium 28.9 86 0.0019 24.8 3.9 89 27-156 13-101 (104)
146 PRK04220 2-phosphoglycerate ki 27.4 4.1E+02 0.0089 26.3 9.0 69 142-214 16-97 (301)
147 PF09851 SHOCT: Short C-termin 27.2 67 0.0014 21.1 2.4 18 181-198 13-30 (31)
148 TIGR02698 CopY_TcrY copper tra 26.5 2.3E+02 0.005 24.2 6.3 56 140-198 16-81 (130)
149 PRK11409 antitoxin YefM; Provi 26.1 1.7E+02 0.0037 23.2 5.1 76 78-162 3-78 (83)
150 cd06404 PB1_aPKC PB1 domain is 26.1 1.3E+02 0.0028 24.6 4.3 56 182-253 17-72 (83)
151 PLN02952 phosphoinositide phos 24.8 1.3E+02 0.0027 32.7 5.3 55 139-198 13-67 (599)
152 COG5502 Uncharacterized conser 24.6 5E+02 0.011 23.1 8.7 101 79-197 23-124 (135)
153 PF08414 NADPH_Ox: Respiratory 24.2 1.1E+02 0.0024 25.9 3.7 61 126-198 30-94 (100)
154 PF09068 EF-hand_2: EF hand; 23.7 3.7E+02 0.008 23.1 7.1 86 56-155 41-126 (127)
155 PF08726 EFhand_Ca_insen: Ca2+ 23.5 89 0.0019 24.5 2.9 26 240-267 6-31 (69)
156 KOG3095 Transcription initiati 23.5 6.2E+02 0.013 25.1 9.3 51 45-107 70-125 (284)
157 PF11061 DUF2862: Protein of u 23.4 53 0.0011 25.6 1.6 32 196-227 15-46 (64)
158 PF12767 SAGA-Tad1: Transcript 22.9 1.4E+02 0.003 28.2 4.7 50 140-199 6-56 (252)
159 COG4103 Uncharacterized protei 22.5 1.2E+02 0.0026 27.3 3.8 73 118-198 24-96 (148)
160 PRK10954 periplasmic protein d 22.4 4.4E+02 0.0095 23.7 7.7 72 129-220 108-180 (207)
161 TIGR02865 spore_II_E stage II 22.4 9.1E+02 0.02 26.8 11.4 54 230-283 437-497 (764)
162 PRK10598 lipoprotein; Provisio 22.2 99 0.0021 28.7 3.4 40 185-224 123-166 (186)
163 PF14513 DAG_kinase_N: Diacylg 22.0 86 0.0019 27.7 2.9 57 29-93 6-63 (138)
164 PF08671 SinI: Anti-repressor 22.0 52 0.0011 21.9 1.1 27 239-269 2-28 (30)
165 KOG3631 Alpha-parvin and relat 21.9 71 0.0015 31.8 2.5 88 82-175 86-178 (365)
166 PRK10236 hypothetical protein; 21.8 5.5E+02 0.012 24.9 8.4 89 55-150 19-115 (237)
167 PF09987 DUF2226: Uncharacteri 21.7 3.6E+02 0.0078 26.8 7.4 77 124-209 160-236 (297)
168 cd03211 GST_C_Metaxin2 GST_C f 21.6 1.7E+02 0.0036 24.5 4.5 41 57-103 37-77 (126)
169 PRK06464 phosphoenolpyruvate s 20.9 3.3E+02 0.0072 30.4 7.7 82 80-162 548-664 (795)
170 PF00690 Cation_ATPase_N: Cati 20.7 2.8E+02 0.0061 20.5 5.1 49 128-177 6-54 (69)
171 KOG4347 GTPase-activating prot 20.6 1.2E+02 0.0027 33.2 4.2 58 126-190 555-612 (671)
172 KOG0506 Glutaminase (contains 20.3 3.4E+02 0.0075 29.2 7.2 106 124-257 84-197 (622)
No 1
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.54 E-value=6e-14 Score=120.99 Aligned_cols=143 Identities=13% Similarity=0.209 Sum_probs=120.1
Q ss_pred ehhhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHH
Q 020151 10 DGTQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASK 86 (330)
Q Consensus 10 DGs~ir~l~~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~ 86 (330)
...++..+.+.|. .| +++ |.+|..||.. +..+|.. .+......++++++.+ ++|.|+.++|..
T Consensus 3 ~~~~~~el~~~F~~fD~d~~-G~i~~~el~~~lr~lg~~-------~t~~el~~~~~~~D~d------g~g~I~~~eF~~ 68 (151)
T KOG0027|consen 3 SEEQILELKEAFQLFDKDGD-GKISVEELGAVLRSLGQN-------PTEEELRDLIKEIDLD------GDGTIDFEEFLD 68 (151)
T ss_pred CHHHHHHHHHHHHHHCCCCC-CcccHHHHHHHHHHcCCC-------CCHHHHHHHHHHhCCC------CCCeEcHHHHHH
Confidence 4567888889999 99 999 9999999999 7666655 5578899999999999 899999999999
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCC
Q 020151 87 LASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSE 166 (330)
Q Consensus 87 ~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~ 166 (330)
.+......-...- .-...+..+|+.+|+|+||+||.+||+.+|.++|-.+.
T Consensus 69 l~~~~~~~~~~~~-----------------------~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~------ 119 (151)
T KOG0027|consen 69 LMEKLGEEKTDEE-----------------------ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLT------ 119 (151)
T ss_pred HHHhhhccccccc-----------------------ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCC------
Confidence 8887655433221 12235889999999999999999999999999877542
Q ss_pred hHHHHHHHhhhccCCCcccCHHHHHHHHH
Q 020151 167 FPQLNDILKKHGAEGEEELGQAQFTELLR 195 (330)
Q Consensus 167 ~~v~d~If~e~D~D~DG~Vs~eEF~~lmk 195 (330)
.+..+.++..+|.|+||.|+++||.++|.
T Consensus 120 ~~e~~~mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 120 DEECKEMIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred HHHHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence 55689999999999999999999999875
No 2
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.43 E-value=1.1e-12 Score=116.78 Aligned_cols=141 Identities=16% Similarity=0.281 Sum_probs=116.1
Q ss_pred EEeehhhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHH
Q 020151 7 TVIDGTQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDH 83 (330)
Q Consensus 7 ~VlDGs~ir~l~~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~ee 83 (330)
+.++=.+|+.+.+.|. +| |+| |.|++.+|.. +..+| .+.|.+....+++.++.+ .+.|+-.+
T Consensus 12 ~~~t~~qi~~lkeaF~l~D~d~~-G~I~~~el~~ilr~lg-------~~~s~~ei~~l~~~~d~~-------~~~idf~~ 76 (160)
T COG5126 12 TQLTEEQIQELKEAFQLFDRDSD-GLIDRNELGKILRSLG-------FNPSEAEINKLFEEIDAG-------NETVDFPE 76 (160)
T ss_pred ccCCHHHHHHHHHHHHHhCcCCC-CCCcHHHHHHHHHHcC-------CCCcHHHHHHHHHhccCC-------CCccCHHH
Confidence 3567788999999999 88 889 9999999999 65444 458899999999998774 78999777
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCC
Q 020151 84 ASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPP 163 (330)
Q Consensus 84 F~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP 163 (330)
|...|...+. + .-..|+ +..+|+-+|.|+||+||..||+..|..+|-.+
T Consensus 77 Fl~~ms~~~~-------~---------------~~~~Ee-----l~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~---- 125 (160)
T COG5126 77 FLTVMSVKLK-------R---------------GDKEEE-----LREAFKLFDKDHDGYISIGELRRVLKSLGERL---- 125 (160)
T ss_pred HHHHHHHHhc-------c---------------CCcHHH-----HHHHHHHhCCCCCceecHHHHHHHHHhhcccC----
Confidence 7776655433 3 112334 88899999999999999999999999988754
Q ss_pred CCChHHHHHHHhhhccCCCcccCHHHHHHHHH
Q 020151 164 FSEFPQLNDILKKHGAEGEEELGQAQFTELLR 195 (330)
Q Consensus 164 ~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmk 195 (330)
+++.++++++.+|.|+||.|++++|++.+.
T Consensus 126 --~deev~~ll~~~d~d~dG~i~~~eF~~~~~ 155 (160)
T COG5126 126 --SDEEVEKLLKEYDEDGDGEIDYEEFKKLIK 155 (160)
T ss_pred --CHHHHHHHHHhcCCCCCceEeHHHHHHHHh
Confidence 345689999999999999999999998765
No 3
>PTZ00183 centrin; Provisional
Probab=99.38 E-value=7.1e-12 Score=105.51 Aligned_cols=140 Identities=10% Similarity=0.212 Sum_probs=111.7
Q ss_pred ehhhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHH
Q 020151 10 DGTQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASK 86 (330)
Q Consensus 10 DGs~ir~l~~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~ 86 (330)
...++..+...|. +| +++ |.||..|+.. +..++ ..++...+..+++.++.+ ++|.|+.++|..
T Consensus 12 ~~~~~~~~~~~F~~~D~~~~-G~i~~~e~~~~l~~~g-------~~~~~~~~~~l~~~~d~~------~~g~i~~~eF~~ 77 (158)
T PTZ00183 12 TEDQKKEIREAFDLFDTDGS-GTIDPKELKVAMRSLG-------FEPKKEEIKQMIADVDKD------GSGKIDFEEFLD 77 (158)
T ss_pred CHHHHHHHHHHHHHhCCCCC-CcccHHHHHHHHHHhC-------CCCCHHHHHHHHHHhCCC------CCCcEeHHHHHH
Confidence 3456777888899 99 888 9999999999 66443 336678899999999988 899999988887
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCC
Q 020151 87 LASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSE 166 (330)
Q Consensus 87 ~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~ 166 (330)
.+.... .. ......+..+|+.+|.+++|.|+..|++.++..++.. -.
T Consensus 78 ~~~~~~-------~~--------------------~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~------l~ 124 (158)
T PTZ00183 78 IMTKKL-------GE--------------------RDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGET------IT 124 (158)
T ss_pred HHHHHh-------cC--------------------CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC------CC
Confidence 654322 11 0122347899999999999999999999999887542 12
Q ss_pred hHHHHHHHhhhccCCCcccCHHHHHHHHHH
Q 020151 167 FPQLNDILKKHGAEGEEELGQAQFTELLRQ 196 (330)
Q Consensus 167 ~~v~d~If~e~D~D~DG~Vs~eEF~~lmkk 196 (330)
...+..+|..+|.|++|.|++++|...|+.
T Consensus 125 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 125 DEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 456899999999999999999999887764
No 4
>PTZ00184 calmodulin; Provisional
Probab=99.37 E-value=1.1e-11 Score=102.56 Aligned_cols=137 Identities=12% Similarity=0.251 Sum_probs=108.0
Q ss_pred hhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHH
Q 020151 12 TQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (330)
Q Consensus 12 s~ir~l~~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~l 88 (330)
..+..+...|. +| +++ |.||..|+.. +..++ .+.++..+..+++.++.+ ++|.|+.++|...+
T Consensus 8 ~~~~~~~~~F~~~D~~~~-G~i~~~e~~~~l~~~~-------~~~~~~~~~~~~~~~d~~------~~g~i~~~ef~~~l 73 (149)
T PTZ00184 8 EQIAEFKEAFSLFDKDGD-GTITTKELGTVMRSLG-------QNPTEAELQDMINEVDAD------GNGTIDFPEFLTLM 73 (149)
T ss_pred HHHHHHHHHHHHHcCCCC-CcCCHHHHHHHHHHhC-------CCCCHHHHHHHHHhcCcC------CCCcCcHHHHHHHH
Confidence 35667778899 99 888 9999999999 55444 335577889999999998 79999999988776
Q ss_pred HHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChH
Q 020151 89 SDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFP 168 (330)
Q Consensus 89 k~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~ 168 (330)
...+. . ......+..+|+.+|.|++|+|++++++.++..++. +. ...
T Consensus 74 ~~~~~-------~--------------------~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~----~~--~~~ 120 (149)
T PTZ00184 74 ARKMK-------D--------------------TDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE----KL--TDE 120 (149)
T ss_pred HHhcc-------C--------------------CcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC----CC--CHH
Confidence 65321 1 011234788999999999999999999999988643 21 234
Q ss_pred HHHHHHhhhccCCCcccCHHHHHHHHH
Q 020151 169 QLNDILKKHGAEGEEELGQAQFTELLR 195 (330)
Q Consensus 169 v~d~If~e~D~D~DG~Vs~eEF~~lmk 195 (330)
.+..+|..+|.+++|.|+.+||...+.
T Consensus 121 ~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 121 EVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 688899999999999999999987764
No 5
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.29 E-value=1e-11 Score=107.12 Aligned_cols=122 Identities=17% Similarity=0.317 Sum_probs=93.3
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHh
Q 020151 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDAL 205 (330)
Q Consensus 126 ~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L 205 (330)
..+..+|+.+|+|++|+||..||+.++..+|.. |.. ..+..+++++|.|++|.|+.+||+.+|.+......
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~----~t~--~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~--- 78 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQN----PTE--EELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKT--- 78 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCC----CCH--HHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccc---
Confidence 457899999999999999999999999998664 322 35889999999999999999999999987664100
Q ss_pred ccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhccccceeccCCchhhhhh
Q 020151 206 ADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRRFYIEEGGRREIVGM 285 (330)
Q Consensus 206 ~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~~~~~~~~~~~~~~~ 285 (330)
.. ..-..+++.||+.+|+++ +|.||++||+.+|..-+.... ..++--|
T Consensus 79 -----------------~~-----------~~~~~el~eaF~~fD~d~-~G~Is~~el~~~l~~lg~~~~---~~e~~~m 126 (151)
T KOG0027|consen 79 -----------------DE-----------EASSEELKEAFRVFDKDG-DGFISASELKKVLTSLGEKLT---DEECKEM 126 (151)
T ss_pred -----------------cc-----------cccHHHHHHHHHHHccCC-CCcCcHHHHHHHHHHhCCcCC---HHHHHHH
Confidence 00 001368899999999998 999999999999943332222 3444444
Q ss_pred hhh
Q 020151 286 MSA 288 (330)
Q Consensus 286 ~~~ 288 (330)
+..
T Consensus 127 i~~ 129 (151)
T KOG0027|consen 127 IRE 129 (151)
T ss_pred HHh
Confidence 433
No 6
>PTZ00183 centrin; Provisional
Probab=99.04 E-value=4.3e-09 Score=88.57 Aligned_cols=138 Identities=7% Similarity=0.072 Sum_probs=105.8
Q ss_pred hHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhc
Q 020151 56 NLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADL 135 (330)
Q Consensus 56 ~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~L 135 (330)
..+..+|..++.+ ++|.|+.++|...++.+ ++.. . ...+..+|+.+
T Consensus 17 ~~~~~~F~~~D~~------~~G~i~~~e~~~~l~~~------g~~~-----------------~-----~~~~~~l~~~~ 62 (158)
T PTZ00183 17 KEIREAFDLFDTD------GSGTIDPKELKVAMRSL------GFEP-----------------K-----KEEIKQMIADV 62 (158)
T ss_pred HHHHHHHHHhCCC------CCCcccHHHHHHHHHHh------CCCC-----------------C-----HHHHHHHHHHh
Confidence 3567788998888 89999999999888743 2111 1 12488999999
Q ss_pred CCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEecc
Q 020151 136 DTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPN 215 (330)
Q Consensus 136 D~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~ 215 (330)
|.+++|.|+..|+..++.... ++......+..+|+.+|.|++|.|+.+||...++..-
T Consensus 63 d~~~~g~i~~~eF~~~~~~~~-----~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~----------------- 120 (158)
T PTZ00183 63 DKDGSGKIDFEEFLDIMTKKL-----GERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELG----------------- 120 (158)
T ss_pred CCCCCCcEeHHHHHHHHHHHh-----cCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-----------------
Confidence 999999999999998876532 2222234689999999999999999999988776421
Q ss_pred ccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhcc
Q 020151 216 IKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPM 269 (330)
Q Consensus 216 e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~ 269 (330)
..+. ...+..+|..+|.++ .|.|+.+++..++..
T Consensus 121 ------~~l~-------------~~~~~~~~~~~d~~~-~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 121 ------ETIT-------------DEELQEMIDEADRNG-DGEISEEEFYRIMKK 154 (158)
T ss_pred ------CCCC-------------HHHHHHHHHHhCCCC-CCcCcHHHHHHHHhc
Confidence 1111 266788999999998 999999999888743
No 7
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.01 E-value=1.9e-09 Score=98.09 Aligned_cols=143 Identities=15% Similarity=0.237 Sum_probs=107.6
Q ss_pred EEeehhhHhhhhcccc-CC-C-CCCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccc-cCHH
Q 020151 7 TVIDGTQLRSLSQPLA-LP-T-SDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKE-FDRD 82 (330)
Q Consensus 7 ~VlDGs~ir~l~~~F~-LD-d-~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~-vd~e 82 (330)
+.++-++|..|..+|. |+ + ++ |.+|+.|++.+..... ..+...|++.|+.. +++. |+.+
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~-g~lt~eef~~i~~~~~----------Np~~~rI~~~f~~~------~~~~~v~F~ 87 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGD-GYLTKEEFLSIPELAL----------NPLADRIIDRFDTD------GNGDPVDFE 87 (187)
T ss_pred cccCHHHHHHHHHHHHHhcccccc-CccCHHHHHHHHHHhc----------CcHHHHHHHHHhcc------CCCCccCHH
Confidence 3466789999999999 99 6 66 9999999999653322 23556677777776 5555 9999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCC
Q 020151 83 HASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVP 162 (330)
Q Consensus 83 eF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlP 162 (330)
+|...|.-+.--.- ..++ +.=+|+-+|.+++|+|+++|+..++..+-.+ +..
T Consensus 88 ~Fv~~ls~f~~~~~----------------------~~~K-----l~faF~vYD~~~~G~I~reel~~iv~~~~~~-~~~ 139 (187)
T KOG0034|consen 88 EFVRLLSVFSPKAS----------------------KREK-----LRFAFRVYDLDGDGFISREELKQILRMMVGE-NDD 139 (187)
T ss_pred HHHHHHhhhcCCcc----------------------HHHH-----HHHHHHHhcCCCCCcCcHHHHHHHHHHHHcc-CCc
Confidence 99988876542111 1134 6667999999999999999999999997543 222
Q ss_pred CCCChH----HHHHHHhhhccCCCcccCHHHHHHHHHH
Q 020151 163 PFSEFP----QLNDILKKHGAEGEEELGQAQFTELLRQ 196 (330)
Q Consensus 163 P~~~~~----v~d~If~e~D~D~DG~Vs~eEF~~lmkk 196 (330)
- +.+ ..+.+|.++|.|+||.||.+||++.+.+
T Consensus 140 ~--~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 140 M--SDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred c--hHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 2 222 3777899999999999999999998764
No 8
>PTZ00184 calmodulin; Provisional
Probab=98.98 E-value=3e-09 Score=88.06 Aligned_cols=105 Identities=14% Similarity=0.295 Sum_probs=83.7
Q ss_pred HHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhc
Q 020151 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALA 206 (330)
Q Consensus 127 ~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~ 206 (330)
.+...|..+|.+++|+|+.+|++.++..+ |.+|. ...+..+|..+|.+++|.|+++||...+...+.
T Consensus 12 ~~~~~F~~~D~~~~G~i~~~e~~~~l~~~----~~~~~--~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~------- 78 (149)
T PTZ00184 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPT--EAELQDMINEVDADGNGTIDFPEFLTLMARKMK------- 78 (149)
T ss_pred HHHHHHHHHcCCCCCcCCHHHHHHHHHHh----CCCCC--HHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhcc-------
Confidence 46789999999999999999999999876 44443 346899999999999999999999887664321
Q ss_pred cCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhccccce
Q 020151 207 DKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRRFY 273 (330)
Q Consensus 207 ~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~~~ 273 (330)
. ......+..+|+.+|+++ +|.|++++++.++..-+..
T Consensus 79 ~----------------------------~~~~~~~~~~F~~~D~~~-~g~i~~~e~~~~l~~~~~~ 116 (149)
T PTZ00184 79 D----------------------------TDSEEEIKEAFKVFDRDG-NGFISAAELRHVMTNLGEK 116 (149)
T ss_pred C----------------------------CcHHHHHHHHHHhhCCCC-CCeEeHHHHHHHHHHHCCC
Confidence 0 001256778999999998 9999999999999654433
No 9
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.97 E-value=8e-09 Score=91.86 Aligned_cols=139 Identities=15% Similarity=0.277 Sum_probs=118.0
Q ss_pred eEEeehhhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHH
Q 020151 6 FTVIDGTQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRD 82 (330)
Q Consensus 6 v~VlDGs~ir~l~~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~e 82 (330)
...+|-++|.+|.+.|+ +| |.| |-|-+..|++ ++.+|-. +|+..++.++++ ..|+|.-.
T Consensus 23 Famf~q~QIqEfKEAF~~mDqnrD-G~IdkeDL~d~~aSlGk~-------~~d~elDaM~~E----------a~gPINft 84 (171)
T KOG0031|consen 23 FAMFDQSQIQEFKEAFNLMDQNRD-GFIDKEDLRDMLASLGKI-------ASDEELDAMMKE----------APGPINFT 84 (171)
T ss_pred HHHhhHHHHHHHHHHHHHHhccCC-CcccHHHHHHHHHHcCCC-------CCHHHHHHHHHh----------CCCCeeHH
Confidence 45789999999999999 99 999 9999999999 9988855 788999999998 67889966
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCC
Q 020151 83 HASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVP 162 (330)
Q Consensus 83 eF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlP 162 (330)
.|+.. +...|.. .|+ +..+-++|+.||.+++|+|..+.||..|...|.-+
T Consensus 85 ~FLTm-------fGekL~g-----------------tdp---e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~--- 134 (171)
T KOG0031|consen 85 VFLTM-------FGEKLNG-----------------TDP---EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRF--- 134 (171)
T ss_pred HHHHH-------HHHHhcC-----------------CCH---HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccC---
Confidence 66554 4455555 233 46789999999999999999999999999987754
Q ss_pred CCCChHHHHHHHhhhccCCCcccCHHHHHHHHH
Q 020151 163 PFSEFPQLNDILKKHGAEGEEELGQAQFTELLR 195 (330)
Q Consensus 163 P~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmk 195 (330)
+++.+++++..+-.|..|.+++.+|+..++
T Consensus 135 ---~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 135 ---TDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred ---CHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 355689999999999999999999998776
No 10
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.95 E-value=5e-09 Score=97.28 Aligned_cols=100 Identities=17% Similarity=0.301 Sum_probs=84.8
Q ss_pred HHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhc
Q 020151 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALA 206 (330)
Q Consensus 127 ~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~ 206 (330)
.+...|...|+|+.|.|+-+||+.||...+= .|.+ .+....++..||.+..|.|+.+||.++-+-
T Consensus 58 ~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~----~~Fs-~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~---------- 122 (221)
T KOG0037|consen 58 QLAGWFQSVDRDRSGRILAKELQQALSNGTW----SPFS-IETCRLMISMFDRDNSGTIGFKEFKALWKY---------- 122 (221)
T ss_pred HHHHHHHhhCccccccccHHHHHHHhhcCCC----CCCC-HHHHHHHHHHhcCCCCCccCHHHHHHHHHH----------
Confidence 4899999999999999999999999986432 2222 345788999999999999999999887553
Q ss_pred cCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhcccccee
Q 020151 207 DKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRRFYI 274 (330)
Q Consensus 207 ~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~~~~ 274 (330)
-+.|+++|+++|+|+ +|+|+++|||..|...++.+
T Consensus 123 --------------------------------i~~Wr~vF~~~D~D~-SG~I~~sEL~~Al~~~Gy~L 157 (221)
T KOG0037|consen 123 --------------------------------INQWRNVFRTYDRDR-SGTIDSSELRQALTQLGYRL 157 (221)
T ss_pred --------------------------------HHHHHHHHHhcccCC-CCcccHHHHHHHHHHcCcCC
Confidence 367999999999999 99999999999996666554
No 11
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.92 E-value=5e-09 Score=93.44 Aligned_cols=106 Identities=14% Similarity=0.250 Sum_probs=86.9
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHH
Q 020151 124 FTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVD 203 (330)
Q Consensus 124 F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~ 203 (330)
--..+..+|.-+|.|++|.|++.+|..++..+ |.+|+. ..+..+|..+|. +.+.|+..+|..+|...+.
T Consensus 18 qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~l----g~~~s~--~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~---- 86 (160)
T COG5126 18 QIQELKEAFQLFDRDSDGLIDRNELGKILRSL----GFNPSE--AEINKLFEEIDA-GNETVDFPEFLTVMSVKLK---- 86 (160)
T ss_pred HHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHc----CCCCcH--HHHHHHHHhccC-CCCccCHHHHHHHHHHHhc----
Confidence 34567889999999999999999999999875 444444 357899999999 9999999999988776552
Q ss_pred HhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhccccc
Q 020151 204 ALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRRF 272 (330)
Q Consensus 204 ~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~~ 272 (330)
+ ..-..+++.||+.+|+|+ +|+||..+|+.+++..+-
T Consensus 87 ----------------------~---------~~~~Eel~~aF~~fD~d~-dG~Is~~eL~~vl~~lge 123 (160)
T COG5126 87 ----------------------R---------GDKEEELREAFKLFDKDH-DGYISIGELRRVLKSLGE 123 (160)
T ss_pred ----------------------c---------CCcHHHHHHHHHHhCCCC-CceecHHHHHHHHHhhcc
Confidence 1 112478899999999999 999999999999984443
No 12
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.92 E-value=9.2e-10 Score=81.61 Aligned_cols=65 Identities=18% Similarity=0.473 Sum_probs=54.2
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHH
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELL 194 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lm 194 (330)
+..+|+.+|+|++|+||++||+.++..++... |+......++.+|+.+|.|+||.|+.+||..+|
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~--~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDM--SDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHS--THHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccc--cHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 56789999999999999999999999987632 222223457888999999999999999998875
No 13
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.90 E-value=3.8e-08 Score=91.49 Aligned_cols=150 Identities=15% Similarity=0.139 Sum_probs=121.4
Q ss_pred hhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHH
Q 020151 16 SLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYI 92 (330)
Q Consensus 16 ~l~~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l 92 (330)
.+.+.|. .| |+. |.|+-+||+. |....-+ + ....=+..++.-|+.+ ..+.|+..||.++-+-+-
T Consensus 58 ~~~~~f~~vD~d~s-g~i~~~eLq~aLsn~~~~--~----Fs~~TcrlmI~mfd~~------~~G~i~f~EF~~Lw~~i~ 124 (221)
T KOG0037|consen 58 QLAGWFQSVDRDRS-GRILAKELQQALSNGTWS--P----FSIETCRLMISMFDRD------NSGTIGFKEFKALWKYIN 124 (221)
T ss_pred HHHHHHHhhCcccc-ccccHHHHHHHhhcCCCC--C----CCHHHHHHHHHHhcCC------CCCccCHHHHHHHHHHHH
Confidence 3447788 89 888 9999999999 7766655 2 3366788888899999 899999999988765432
Q ss_pred HHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHH
Q 020151 93 TAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLND 172 (330)
Q Consensus 93 ~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~ 172 (330)
+ =.++|+.+|.|++|+|+..||+.||..+|-.+ .+.+++-
T Consensus 125 --------~--------------------------Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~L------spq~~~~ 164 (221)
T KOG0037|consen 125 --------Q--------------------------WRNVFRTYDRDRSGTIDSSELRQALTQLGYRL------SPQFYNL 164 (221)
T ss_pred --------H--------------------------HHHHHHhcccCCCCcccHHHHHHHHHHcCcCC------CHHHHHH
Confidence 1 45789999999999999999999999999865 2456899
Q ss_pred HHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCC
Q 020151 173 ILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTW 252 (330)
Q Consensus 173 If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d 252 (330)
|++++|.-++|.+..+.|.+.+-.+ +.+-.+||..|++
T Consensus 165 lv~kyd~~~~g~i~FD~FI~ccv~L------------------------------------------~~lt~~Fr~~D~~ 202 (221)
T KOG0037|consen 165 LVRKYDRFGGGRIDFDDFIQCCVVL------------------------------------------QRLTEAFRRRDTA 202 (221)
T ss_pred HHHHhccccCCceeHHHHHHHHHHH------------------------------------------HHHHHHHHHhccc
Confidence 9999998889999999998875432 4455699999999
Q ss_pred CCCCcccHH
Q 020151 253 DMVYLLTKS 261 (330)
Q Consensus 253 ~~~G~isk~ 261 (330)
. .|.|+..
T Consensus 203 q-~G~i~~~ 210 (221)
T KOG0037|consen 203 Q-QGSITIS 210 (221)
T ss_pred c-ceeEEEe
Confidence 8 8987654
No 14
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.80 E-value=3.9e-08 Score=87.87 Aligned_cols=132 Identities=9% Similarity=0.222 Sum_probs=107.7
Q ss_pred hcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHH
Q 020151 18 SQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITA 94 (330)
Q Consensus 18 ~~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~a 94 (330)
...|. .| +.+ |+|-+.||.- +.++|.. .+...+..++..++.+ +.|.|+-+.|...+...+.
T Consensus 36 ~e~f~lfd~~~~-g~iD~~EL~vAmralGFE-------~~k~ei~kll~d~dk~------~~g~i~fe~f~~~mt~k~~- 100 (172)
T KOG0028|consen 36 KEAFELFDPDMA-GKIDVEELKVAMRALGFE-------PKKEEILKLLADVDKE------GSGKITFEDFRRVMTVKLG- 100 (172)
T ss_pred HHHHHhhccCCC-CcccHHHHHHHHHHcCCC-------cchHHHHHHHHhhhhc------cCceechHHHHHHHHHHHh-
Confidence 36788 66 888 9999999977 7777766 5667888899998888 7999998888877654432
Q ss_pred HHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHH
Q 020151 95 IADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDIL 174 (330)
Q Consensus 95 iAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If 174 (330)
. +. ..+. +..+|+.+|-|++|+||..+|+.....||..+ +++.+.+++
T Consensus 101 ------e-------------~d--t~eE-----i~~afrl~D~D~~Gkis~~~lkrvakeLgenl------tD~El~eMI 148 (172)
T KOG0028|consen 101 ------E-------------RD--TKEE-----IKKAFRLFDDDKTGKISQRNLKRVAKELGENL------TDEELMEMI 148 (172)
T ss_pred ------c-------------cC--cHHH-----HHHHHHcccccCCCCcCHHHHHHHHHHhCccc------cHHHHHHHH
Confidence 1 11 3344 88999999999999999999998888887643 456789999
Q ss_pred hhhccCCCcccCHHHHHHHHHH
Q 020151 175 KKHGAEGEEELGQAQFTELLRQ 196 (330)
Q Consensus 175 ~e~D~D~DG~Vs~eEF~~lmkk 196 (330)
+++|.|+||.|+++||...|++
T Consensus 149 eEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 149 EEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHhcccccccccHHHHHHHHhc
Confidence 9999999999999999998875
No 15
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.74 E-value=3.6e-08 Score=78.66 Aligned_cols=69 Identities=19% Similarity=0.286 Sum_probs=58.1
Q ss_pred HHHHHhhcC-CCCCC-cccHHHHHHHHhh-ccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHH
Q 020151 128 AENLFADLD-TEDEG-KVCKGEIQNALGH-MGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 198 (330)
Q Consensus 128 v~~~F~~LD-~d~DG-~LS~~ELr~AL~~-lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL 198 (330)
+..+|+.+| +|++| +|++.||+.+|.. +|..+|.+|. ...+++||+.+|.|++|.|+++||..++..++
T Consensus 11 l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s--~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKD--ADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred HHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCC--HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 788999997 99999 5999999999986 7654444332 23589999999999999999999999988766
No 16
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.72 E-value=6.8e-08 Score=77.96 Aligned_cols=70 Identities=16% Similarity=0.285 Sum_probs=55.4
Q ss_pred HHHHHhhcC-CCCCC-cccHHHHHHHHhh-ccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHH
Q 020151 128 AENLFADLD-TEDEG-KVCKGEIQNALGH-MGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 199 (330)
Q Consensus 128 v~~~F~~LD-~d~DG-~LS~~ELr~AL~~-lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~ 199 (330)
+..+|+.+| +|+|| +||++||+..|.+ ++..++-. .....+++|++++|.|+||.|+++||..+|..++-
T Consensus 12 ~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~--~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~~ 84 (93)
T cd05026 12 LIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQ--KDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALTV 84 (93)
T ss_pred HHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccc--cCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence 445599999 78998 5999999999977 33211111 13456999999999999999999999999988753
No 17
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.67 E-value=9.8e-08 Score=77.24 Aligned_cols=72 Identities=14% Similarity=0.222 Sum_probs=59.7
Q ss_pred HHHHHHhhcCC-CCCCcccHHHHHHHHhh-ccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHH
Q 020151 127 LAENLFADLDT-EDEGKVCKGEIQNALGH-MGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVD 203 (330)
Q Consensus 127 ~v~~~F~~LD~-d~DG~LS~~ELr~AL~~-lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~ 203 (330)
.+..+|+.+|+ +++|+|+++||+..|.+ +|.-. ++...++++|+.+|.|+||.|+++||..+|..+..+...
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~l-----s~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~~~~~ 82 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPHLL-----KDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELAKAVKG 82 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhc-----cCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 36678999999 99999999999999998 65321 111569999999999999999999999999988755433
No 18
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.65 E-value=2.4e-07 Score=84.96 Aligned_cols=131 Identities=14% Similarity=0.089 Sum_probs=96.3
Q ss_pred CccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 020151 28 SSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVV 106 (330)
Q Consensus 28 ~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v 106 (330)
+|.++..+++. ++.... .+-|....+-+|+.||.+ ++|.|+-++|...|+-.+.+-.+
T Consensus 41 ~G~~~~~~F~~i~~~~fp------~gd~~~y~~~vF~~fD~~------~dg~i~F~Efi~als~~~rGt~e--------- 99 (193)
T KOG0044|consen 41 SGRLTLEEFREIYASFFP------DGDASKYAELVFRTFDKN------KDGTIDFLEFICALSLTSRGTLE--------- 99 (193)
T ss_pred CCccCHHHHHHHHHHHCC------CCCHHHHHHHHHHHhccc------CCCCcCHHHHHHHHHHHcCCcHH---------
Confidence 49999999999 664432 345678889999999999 89999966655555544332211
Q ss_pred EEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccc---cCCCCCCCCh--HHHHHHHhhhccCC
Q 020151 107 CVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGV---EFGVPPFSEF--PQLNDILKKHGAEG 181 (330)
Q Consensus 107 ~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv---~~GlPP~~~~--~v~d~If~e~D~D~ 181 (330)
++ +.-+|+..|.|+||.|++.|+-..+..+-. ....|..... ...+.||+.+|.|+
T Consensus 100 --------------ek-----l~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~ 160 (193)
T KOG0044|consen 100 --------------EK-----LKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNK 160 (193)
T ss_pred --------------HH-----hhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCC
Confidence 11 234499999999999999999887777432 2344522222 35899999999999
Q ss_pred CcccCHHHHHHHHHHHH
Q 020151 182 EEELGQAQFTELLRQVL 198 (330)
Q Consensus 182 DG~Vs~eEF~~lmkkIL 198 (330)
||.|+.+||....+..-
T Consensus 161 Dg~lT~eef~~~~~~d~ 177 (193)
T KOG0044|consen 161 DGKLTLEEFIEGCKADP 177 (193)
T ss_pred CCcccHHHHHHHhhhCH
Confidence 99999999999887543
No 19
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.63 E-value=1.7e-07 Score=68.67 Aligned_cols=63 Identities=19% Similarity=0.385 Sum_probs=54.9
Q ss_pred HHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHH
Q 020151 129 ENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 199 (330)
Q Consensus 129 ~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~ 199 (330)
..+|+.+|.|++|.|+.+|++.++.++| + ..+.++.+|+.+|.+++|.|+.+||...+..+..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g----~----~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~~~ 64 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG----L----PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIAL 64 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC----C----CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHHH
Confidence 3589999999999999999999998864 3 2345899999999999999999999999987764
No 20
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.55 E-value=1.7e-07 Score=75.18 Aligned_cols=70 Identities=9% Similarity=0.142 Sum_probs=57.2
Q ss_pred HHHHHHhhcCC-CC-CCcccHHHHHHHHhh-ccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHH
Q 020151 127 LAENLFADLDT-ED-EGKVCKGEIQNALGH-MGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 198 (330)
Q Consensus 127 ~v~~~F~~LD~-d~-DG~LS~~ELr~AL~~-lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL 198 (330)
.+..+|+.+|. |+ +|+||..||+.+|.. +|...|.++.. ..++.+|+.+|.|++|.|+++||..++..+-
T Consensus 9 ~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~--~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~ 81 (94)
T cd05031 9 SLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDP--MAVDKIMKDLDQNRDGKVNFEEFVSLVAGLS 81 (94)
T ss_pred HHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccH--HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 47789999997 87 699999999999986 44434544432 3589999999999999999999999887654
No 21
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.50 E-value=5.7e-07 Score=72.32 Aligned_cols=71 Identities=14% Similarity=0.264 Sum_probs=56.4
Q ss_pred HHHHHHhhcC-CCCCC-cccHHHHHHHHhh-ccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHH
Q 020151 127 LAENLFADLD-TEDEG-KVCKGEIQNALGH-MGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 199 (330)
Q Consensus 127 ~v~~~F~~LD-~d~DG-~LS~~ELr~AL~~-lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~ 199 (330)
.+..+|+.+| +|+|| +|+++||+.+|.. ++.-.|-++ +...++++++.+|.|+||.|+++||..++..++.
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~--~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~~ 82 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIK--EQEVVDKVMETLDSDGDGECDFQEFMAFVAMVTT 82 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCC--CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 3677899998 79999 6999999999998 111112222 2345899999999999999999999999988774
No 22
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.44 E-value=8.4e-07 Score=71.28 Aligned_cols=73 Identities=22% Similarity=0.346 Sum_probs=59.2
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHh
Q 020151 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDAL 205 (330)
Q Consensus 126 ~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L 205 (330)
..+..+|..+|.|++|.||.++++.+|..+ |+| ...++.+|..+|.+++|.|+++||..+++.+- .-.
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~----~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~----~~~ 77 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLP----QTLLAKIWNLADIDNDGELDKDEFALAMHLIY----RKL 77 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCC----HHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH----HHH
Confidence 357889999999999999999999999885 433 23478999999999999999999998777544 344
Q ss_pred ccCce
Q 020151 206 ADKHI 210 (330)
Q Consensus 206 ~~~PV 210 (330)
.+.||
T Consensus 78 ~g~~~ 82 (96)
T smart00027 78 NGYPI 82 (96)
T ss_pred cCCCC
Confidence 45555
No 23
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.44 E-value=7.6e-07 Score=86.91 Aligned_cols=187 Identities=16% Similarity=0.165 Sum_probs=117.8
Q ss_pred cccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhh---cCCCCcccccccccCHHHHHHHHHHHH
Q 020151 19 QPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHI---SGSDDDVTFRIKEFDRDHASKLASDYI 92 (330)
Q Consensus 19 ~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~---~~~~~~~~~~~~~vd~eeF~~~lk~~l 92 (330)
..|. +| ++| |-+|.+||+. ++.+-. ..++..+-+++ +.+ .+|.|+-++....+-.+-
T Consensus 81 ~l~~~iD~~~D-gfv~~~El~~wi~~s~k----------~~v~~~~~~~~~~~d~~------~Dg~i~~eey~~~~~~~~ 143 (325)
T KOG4223|consen 81 KLVPKIDSDSD-GFVTESELKAWIMQSQK----------KYVVEEAARRWDEYDKN------KDGFITWEEYLPQTYGRV 143 (325)
T ss_pred HHHhhhcCCCC-CceeHHHHHHHHHHHHH----------HHHHHHHHHHHHHhccC------ccceeeHHHhhhhhhhcc
Confidence 4567 99 999 9999999999 775532 34555555554 444 788999666655544332
Q ss_pred HHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHH
Q 020151 93 TAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLND 172 (330)
Q Consensus 93 ~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~ 172 (330)
. -++. ..-..++.+-++.+... ...|+.-|.|+||.|+++|+-.+|-= +- -|..-.+|+.+
T Consensus 144 ~-~~~~------~~d~e~~~~~~km~~rD-------e~rFk~AD~d~dg~lt~EEF~aFLHP---Ee--~p~M~~iVi~E 204 (325)
T KOG4223|consen 144 D-LPDE------FPDEEDNEEYKKMIARD-------EERFKAADQDGDGSLTLEEFTAFLHP---EE--HPHMKDIVIAE 204 (325)
T ss_pred c-Cccc------cccchhcHHHHHHHHHH-------HHHHhhcccCCCCcccHHHHHhccCh---hh--cchHHHHHHHH
Confidence 2 0000 00122333333332222 25799999999999999999954321 10 13333567888
Q ss_pred HHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCC
Q 020151 173 ILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTW 252 (330)
Q Consensus 173 If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d 252 (330)
-+...|.|+||.|+++||..-|-.--. =+..|=-|+. +-...|..+|++
T Consensus 205 tl~d~Dkn~DG~I~~eEfigd~~~~~~-----~~~epeWv~~--------------------------Ere~F~~~~Dkn 253 (325)
T KOG4223|consen 205 TLEDIDKNGDGKISLEEFIGDLYSHEG-----NEEEPEWVLT--------------------------EREQFFEFRDKN 253 (325)
T ss_pred HHhhcccCCCCceeHHHHHhHHhhccC-----CCCCcccccc--------------------------cHHHHHHHhhcC
Confidence 899999999999999999765543221 1122222222 122466778999
Q ss_pred CCCCcccHHHHHhhhccccce
Q 020151 253 DMVYLLTKSDFDDFIPMRRFY 273 (330)
Q Consensus 253 ~~~G~isk~eLr~~l~~~~~~ 273 (330)
+ .|+++++||++.|--...+
T Consensus 254 k-DG~L~~dEl~~WI~P~~~d 273 (325)
T KOG4223|consen 254 K-DGKLDGDELLDWILPSEQD 273 (325)
T ss_pred C-CCccCHHHHhcccCCCCcc
Confidence 8 9999999999888444443
No 24
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.44 E-value=8.2e-07 Score=71.62 Aligned_cols=70 Identities=14% Similarity=0.220 Sum_probs=55.5
Q ss_pred HHHHHhh-cCCCCCC-cccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHH
Q 020151 128 AENLFAD-LDTEDEG-KVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 198 (330)
Q Consensus 128 v~~~F~~-LD~d~DG-~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL 198 (330)
+..+|+. .|+|++| +||++||+..+.+....+. .-..++..++++++.+|.|+||.|+++||..+|..+.
T Consensus 11 l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~-~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 11 LIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFT-KNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhh-cCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 5678999 8898886 9999999999998532111 0111245689999999999999999999999988875
No 25
>PLN02964 phosphatidylserine decarboxylase
Probab=98.42 E-value=6.1e-07 Score=94.91 Aligned_cols=101 Identities=17% Similarity=0.240 Sum_probs=79.5
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCCh-HHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHH
Q 020151 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEF-PQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDA 204 (330)
Q Consensus 126 ~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~-~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~ 204 (330)
..+..+|..+|.|+||++ +..++..+|. ..|.+.. ..++.+|+.+|.|++|.|+.+||..+|..+-
T Consensus 143 ~elkeaF~lfD~dgdG~i----Lg~ilrslG~---~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg------ 209 (644)
T PLN02964 143 ESACESFDLLDPSSSNKV----VGSIFVSCSI---EDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFG------ 209 (644)
T ss_pred HHHHHHHHHHCCCCCCcC----HHHHHHHhCC---CCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhc------
Confidence 346778999999999997 7777777643 3555542 3489999999999999999999999887421
Q ss_pred hccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhccc
Q 020151 205 LADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMR 270 (330)
Q Consensus 205 L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~ 270 (330)
.. . -+.++..+|+.+|+|+ +|.||.+||+..+...
T Consensus 210 --~~---------------~-------------seEEL~eaFk~fDkDg-dG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 210 --NL---------------V-------------AANKKEELFKAADLNG-DGVVTIDELAALLALQ 244 (644)
T ss_pred --cC---------------C-------------CHHHHHHHHHHhCCCC-CCcCCHHHHHHHHHhc
Confidence 00 0 1367889999999999 9999999999999664
No 26
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.41 E-value=1.2e-06 Score=70.45 Aligned_cols=70 Identities=10% Similarity=0.207 Sum_probs=56.2
Q ss_pred HHHHHhhcCC-CC-CCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHH
Q 020151 128 AENLFADLDT-ED-EGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQD 200 (330)
Q Consensus 128 v~~~F~~LD~-d~-DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~ 200 (330)
+..+|+++|. |+ +|+||.+||+.+|.+.. .+|.++ +...++++|+.+|.|++|.|+++||..+|..++.+
T Consensus 12 ~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~-~lg~k~--t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~~~ 83 (88)
T cd05029 12 LVAIFHKYSGREGDKNTLSKKELKELIQKEL-TIGSKL--QDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALALI 83 (88)
T ss_pred HHHHHHHHHccCCCCCEECHHHHHHHHHHHH-hcCCCC--CHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHH
Confidence 5678999998 67 89999999999997410 124333 23468999999999999999999999999887753
No 27
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=98.38 E-value=1.8e-06 Score=86.73 Aligned_cols=67 Identities=16% Similarity=0.377 Sum_probs=55.8
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHH
Q 020151 125 TMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQ 196 (330)
Q Consensus 125 ~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkk 196 (330)
+.-+..+|++||.+++|.+...+|.++|..+. .| .........+|...|.|.||.||++||+..+..
T Consensus 13 ~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~----~~-~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~ 79 (463)
T KOG0036|consen 13 DIRIRCLFKELDSKNDGQVDLDQLEKGLEKLD----HP-KPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN 79 (463)
T ss_pred HHHHHHHHHHhccCCCCceeHHHHHHHHHhcC----CC-CCchHHHHHHHHhcccCcCCcccHHHHHHHHHH
Confidence 44578899999999999999999999999973 44 333445788999999999999999999776554
No 28
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.37 E-value=4.3e-06 Score=70.86 Aligned_cols=62 Identities=11% Similarity=0.184 Sum_probs=51.2
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHH
Q 020151 124 FTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLR 195 (330)
Q Consensus 124 F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmk 195 (330)
....+.-.|..+|.|+||+||++||.++. +. |+ ..-++.+|+.+|.|+||.||++||+..+.
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~-----~~---e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR--LD-----PN---EHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH--cc-----ch---HHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 44568889999999999999999999765 21 11 23478899999999999999999999873
No 29
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=98.36 E-value=2.3e-06 Score=86.12 Aligned_cols=146 Identities=17% Similarity=0.242 Sum_probs=110.3
Q ss_pred cccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHH
Q 020151 19 QPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAI 95 (330)
Q Consensus 19 ~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~ai 95 (330)
..|. || +++ |.++..+|.+ ++.+.-. ..|......+|+.++.+ +++.||-++|+. |+.+
T Consensus 18 ~lf~~lD~~~~-g~~d~~~l~k~~~~l~~~------~~~~~~~~~l~~~~d~~------~dg~vDy~eF~~----Y~~~- 79 (463)
T KOG0036|consen 18 CLFKELDSKND-GQVDLDQLEKGLEKLDHP------KPNYEAAKMLFSAMDAN------RDGRVDYSEFKR----YLDN- 79 (463)
T ss_pred HHHHHhccCCC-CceeHHHHHHHHHhcCCC------CCchHHHHHHHHhcccC------cCCcccHHHHHH----HHHH-
Confidence 5688 99 899 9999999999 7755422 12356777889998888 899999777654 4332
Q ss_pred HHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHh
Q 020151 96 ADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILK 175 (330)
Q Consensus 96 Ad~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~ 175 (330)
. +..+..+|+.+|.++||.|...||.+.|..+|+.+ +++....+|+
T Consensus 80 -------------------------~---E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l------~de~~~k~~e 125 (463)
T KOG0036|consen 80 -------------------------K---ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQL------SDEKAAKFFE 125 (463)
T ss_pred -------------------------h---HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCcc------CHHHHHHHHH
Confidence 1 12377889999999999999999999999998864 3566888999
Q ss_pred hhccCCCcccCHHHHHHHHHH----HHHHHHHHhccCceEEeccc
Q 020151 176 KHGAEGEEELGQAQFTELLRQ----VLQDIVDALADKHIIIIPNI 216 (330)
Q Consensus 176 e~D~D~DG~Vs~eEF~~lmkk----IL~~~A~~L~~~PV~va~~e 216 (330)
..|.++++.|+.+||++.+.- -+..+-..-+..-++.++..
T Consensus 126 ~~d~~g~~~I~~~e~rd~~ll~p~s~i~di~~~W~h~~~idigE~ 170 (463)
T KOG0036|consen 126 HMDKDGKATIDLEEWRDHLLLYPESDLEDIYDFWRHVLLIDIGED 170 (463)
T ss_pred HhccCCCeeeccHHHHhhhhcCChhHHHHHHHhhhhheEEEcccc
Confidence 999999999999999988753 23333333344445555533
No 30
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.31 E-value=2.3e-06 Score=78.55 Aligned_cols=150 Identities=13% Similarity=0.128 Sum_probs=104.3
Q ss_pred hhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhh
Q 020151 55 QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFAD 134 (330)
Q Consensus 55 ~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~ 134 (330)
...+....+.|-.+- .+|.++.++|++.++.+.- ..+.. ..++.+|+.
T Consensus 25 ~~ei~~~Yr~Fk~~c-----P~G~~~~~~F~~i~~~~fp------------------------~gd~~---~y~~~vF~~ 72 (193)
T KOG0044|consen 25 KKEIQQWYRGFKNEC-----PSGRLTLEEFREIYASFFP------------------------DGDAS---KYAELVFRT 72 (193)
T ss_pred HHHHHHHHHHhcccC-----CCCccCHHHHHHHHHHHCC------------------------CCCHH---HHHHHHHHH
Confidence 444444455554441 3788999998887765431 12333 457888999
Q ss_pred cCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEec
Q 020151 135 LDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIP 214 (330)
Q Consensus 135 LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~ 214 (330)
+|.|+||.|+-.|+-.||..+.. |.+-.. ++-.|+.+|.|+||.|+++|+...++.|...+.. ...|
T Consensus 73 fD~~~dg~i~F~Efi~als~~~r--Gt~eek----l~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~--~~~~----- 139 (193)
T KOG0044|consen 73 FDKNKDGTIDFLEFICALSLTSR--GTLEEK----LKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGS--KALP----- 139 (193)
T ss_pred hcccCCCCcCHHHHHHHHHHHcC--CcHHHH----hhhhheeecCCCCceEcHHHHHHHHHHHHHHccc--ccCC-----
Confidence 99999999999998878877644 333222 3334999999999999999999999888863332 1111
Q ss_pred cccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhc
Q 020151 215 NIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIP 268 (330)
Q Consensus 215 ~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~ 268 (330)
.+. ..-++....+|+.+|+++ +|.||-+|+....+
T Consensus 140 ----~~~--------------~~~~~~v~~if~k~D~n~-Dg~lT~eef~~~~~ 174 (193)
T KOG0044|consen 140 ----EDE--------------ETPEERVDKIFSKMDKNK-DGKLTLEEFIEGCK 174 (193)
T ss_pred ----ccc--------------ccHHHHHHHHHHHcCCCC-CCcccHHHHHHHhh
Confidence 011 112466777999999999 99999999887663
No 31
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.29 E-value=1.9e-06 Score=61.74 Aligned_cols=53 Identities=15% Similarity=0.520 Sum_probs=44.1
Q ss_pred CCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHH
Q 020151 139 DEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQ 196 (330)
Q Consensus 139 ~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkk 196 (330)
++|.|++++++.+|..+|.. .. .+..++.+|..+|.|++|.|+++||+..|+.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~----~~-s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIK----DL-SEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSS----SS-CHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCC----CC-CHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 47999999999999776543 21 2345899999999999999999999998874
No 32
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.28 E-value=5.6e-06 Score=74.27 Aligned_cols=100 Identities=18% Similarity=0.257 Sum_probs=85.1
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHh
Q 020151 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDAL 205 (330)
Q Consensus 126 ~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L 205 (330)
..+..+|+-+|.+++|+|-.+||+.|+..+|.+ |. ...+..++.++|.++.|.|+.++|+..|...+.
T Consensus 33 q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE----~~--k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~------ 100 (172)
T KOG0028|consen 33 QEIKEAFELFDPDMAGKIDVEELKVAMRALGFE----PK--KEEILKLLADVDKEGSGKITFEDFRRVMTVKLG------ 100 (172)
T ss_pred hhHHHHHHhhccCCCCcccHHHHHHHHHHcCCC----cc--hHHHHHHHHhhhhccCceechHHHHHHHHHHHh------
Confidence 347889999999999999999999999998765 21 235888999999999999999999999887774
Q ss_pred ccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhh
Q 020151 206 ADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 206 ~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l 267 (330)
.+ - + ..++..+|+..|-|+ +|+||-.+|+.+.
T Consensus 101 -------------------e~----d-t-----~eEi~~afrl~D~D~-~Gkis~~~lkrva 132 (172)
T KOG0028|consen 101 -------------------ER----D-T-----KEEIKKAFRLFDDDK-TGKISQRNLKRVA 132 (172)
T ss_pred -------------------cc----C-c-----HHHHHHHHHcccccC-CCCcCHHHHHHHH
Confidence 11 0 1 267888999999999 9999999999887
No 33
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.28 E-value=3e-06 Score=58.75 Aligned_cols=61 Identities=18% Similarity=0.450 Sum_probs=52.0
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHH
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELL 194 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lm 194 (330)
+..+|..+|.+++|.|+.++++.++..++. |+ ..+.+..+|+.+|.+++|.|+.+||...+
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~----~~--~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGE----GL--SEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCC----CC--CHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 567899999999999999999999998752 22 24567889999999999999999998765
No 34
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.27 E-value=4e-06 Score=65.85 Aligned_cols=70 Identities=13% Similarity=0.214 Sum_probs=56.3
Q ss_pred HHHHHHhhcCC--CCCCcccHHHHHHHHhh-ccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHH
Q 020151 127 LAENLFADLDT--EDEGKVCKGEIQNALGH-MGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 198 (330)
Q Consensus 127 ~v~~~F~~LD~--d~DG~LS~~ELr~AL~~-lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL 198 (330)
.+..+|..+|. |++|.|+.+|++.++.. +|...+ +......++.|+..+|.+++|.|+++||..++....
T Consensus 9 ~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~--~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~~ 81 (88)
T cd00213 9 TIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLK--NQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKLA 81 (88)
T ss_pred HHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhcc--CCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHH
Confidence 36678999999 89999999999999976 433222 112345689999999999999999999999888763
No 35
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.24 E-value=8.8e-06 Score=72.72 Aligned_cols=96 Identities=14% Similarity=0.263 Sum_probs=78.7
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhcc
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALAD 207 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~ 207 (330)
...+|.-+|.|+||.|.++.|+..|.++|.. + .++.++.++++. .|+|+..-|+.++-+-|.
T Consensus 34 fKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~----~--~d~elDaM~~Ea----~gPINft~FLTmfGekL~-------- 95 (171)
T KOG0031|consen 34 FKEAFNLMDQNRDGFIDKEDLRDMLASLGKI----A--SDEELDAMMKEA----PGPINFTVFLTMFGEKLN-------- 95 (171)
T ss_pred HHHHHHHHhccCCCcccHHHHHHHHHHcCCC----C--CHHHHHHHHHhC----CCCeeHHHHHHHHHHHhc--------
Confidence 4567999999999999999999999998763 1 134688888875 789999999988776553
Q ss_pred CceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhcc
Q 020151 208 KHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPM 269 (330)
Q Consensus 208 ~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~ 269 (330)
|.+ | +..+..||+.+|.+. +|+|..++||..|..
T Consensus 96 -------------gtd------------p--e~~I~~AF~~FD~~~-~G~I~~d~lre~Ltt 129 (171)
T KOG0031|consen 96 -------------GTD------------P--EEVILNAFKTFDDEG-SGKIDEDYLRELLTT 129 (171)
T ss_pred -------------CCC------------H--HHHHHHHHHhcCccC-CCccCHHHHHHHHHH
Confidence 222 2 477888999999998 999999999999943
No 36
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=98.15 E-value=6.1e-05 Score=68.83 Aligned_cols=138 Identities=16% Similarity=0.198 Sum_probs=102.7
Q ss_pred HHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCC
Q 020151 60 TALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTED 139 (330)
Q Consensus 60 ~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~ 139 (330)
..|.+++.+. +.|.++++||.... .+ +.+.+.+.+|..+|.++
T Consensus 37 ~rF~kl~~~~-----~~g~lt~eef~~i~---------~~-----------------------~~Np~~~rI~~~f~~~~ 79 (187)
T KOG0034|consen 37 ERFKKLDRNN-----GDGYLTKEEFLSIP---------EL-----------------------ALNPLADRIIDRFDTDG 79 (187)
T ss_pred HHHHHhcccc-----ccCccCHHHHHHHH---------HH-----------------------hcCcHHHHHHHHHhccC
Confidence 3566666662 68899999998765 22 24445889999999999
Q ss_pred CCc-ccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccc
Q 020151 140 EGK-VCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKI 218 (330)
Q Consensus 140 DG~-LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~ 218 (330)
+|. ++.++.-..|.-.. |+......+.=.|+-+|.|++|.|+.+|+...++.+.. ++.
T Consensus 80 ~~~~v~F~~Fv~~ls~f~-----~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~----------------~~~ 138 (187)
T KOG0034|consen 80 NGDPVDFEEFVRLLSVFS-----PKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVG----------------END 138 (187)
T ss_pred CCCccCHHHHHHHHhhhc-----CCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHc----------------cCC
Confidence 988 99888877766642 23332224666899999999999999999999998874 111
Q ss_pred cCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhcc
Q 020151 219 IDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPM 269 (330)
Q Consensus 219 ~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~ 269 (330)
.+ |. ...+...+.+|..+|.|+ +|+||.+|.+.++..
T Consensus 139 ~~-~~------------e~~~~i~d~t~~e~D~d~-DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 139 DM-SD------------EQLEDIVDKTFEEADTDG-DGKISFEEFCKVVEK 175 (187)
T ss_pred cc-hH------------HHHHHHHHHHHHHhCCCC-CCcCcHHHHHHHHHc
Confidence 11 11 333678888999999999 999999999998843
No 37
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.10 E-value=8.5e-06 Score=60.23 Aligned_cols=65 Identities=20% Similarity=0.349 Sum_probs=52.9
Q ss_pred HHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhc
Q 020151 170 LNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMM 249 (330)
Q Consensus 170 ~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~ 249 (330)
+..+|+.+|.|++|.|+.+||...++.+...+- . ......+..+|+.+
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~-----------------------~---------~~~~~~~~~~~~~~ 49 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMS-----------------------D---------EESDEMIDQIFREF 49 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHST-----------------------H---------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhccccc-----------------------H---------HHHHHHHHHHHHHh
Confidence 578999999999999999999998886552100 1 33457888899999
Q ss_pred CCCCCCCcccHHHHHhhh
Q 020151 250 DTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 250 d~d~~~G~isk~eLr~~l 267 (330)
|+++ +|.||-+|+..++
T Consensus 50 D~d~-dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 50 DTDG-DGRISFDEFLNFM 66 (66)
T ss_dssp TTTS-SSSEEHHHHHHHH
T ss_pred CCCC-cCCCcHHHHhccC
Confidence 9999 9999999998764
No 38
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.06 E-value=1.6e-05 Score=63.52 Aligned_cols=71 Identities=13% Similarity=0.133 Sum_probs=54.2
Q ss_pred HHHHHhhcCCC--CCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHH
Q 020151 128 AENLFADLDTE--DEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 199 (330)
Q Consensus 128 v~~~F~~LD~d--~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~ 199 (330)
+...|.+.+.. ++|+||++||+..|.+.... .++...+...++.+|+.+|.|++|.|+++||..++..++.
T Consensus 10 ~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~~ 82 (88)
T cd05030 10 IINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVGV 82 (88)
T ss_pred HHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 45678888866 47899999999999753211 1222222456999999999999999999999999987753
No 39
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=98.05 E-value=8e-06 Score=83.02 Aligned_cols=158 Identities=15% Similarity=0.230 Sum_probs=102.0
Q ss_pred EeehhhHhhhh-----------cccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccc
Q 020151 8 VIDGTQLRSLS-----------QPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTF 74 (330)
Q Consensus 8 VlDGs~ir~l~-----------~~F~-LD-d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~ 74 (330)
++--|.++.|. .-|. .| +.. |+||.+.-...+ |...|++||=..+.+=+...+.+
T Consensus 446 ~vEeSAlk~Lrerl~s~~sdL~~eF~~~D~~ks-G~lsis~Wa~~m-----E~i~~L~LPWr~L~~kla~~s~d------ 513 (631)
T KOG0377|consen 446 IVEESALKELRERLRSHRSDLEDEFRKYDPKKS-GKLSISHWAKCM-----ENITGLNLPWRLLRPKLANGSDD------ 513 (631)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhcChhhc-CeeeHHHHHHHH-----HHHhcCCCcHHHhhhhccCCCcC------
Confidence 34455566655 6688 88 555 999999988855 44567889965555544443333
Q ss_pred cccccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhh
Q 020151 75 RIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGH 154 (330)
Q Consensus 75 ~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~ 154 (330)
+.|- |....-.-=...|+.- -|+.|.+-+= .....++.+|..+|+|++|.||-+|.+.|.+-
T Consensus 514 --~~v~----------Y~~~~~~l~~e~~~~e---a~~slvetLY---r~ks~LetiF~~iD~D~SG~isldEF~~a~~l 575 (631)
T KOG0377|consen 514 --GKVE----------YKSTLDNLDTEVILEE---AGSSLVETLY---RNKSSLETIFNIIDADNSGEISLDEFRTAWKL 575 (631)
T ss_pred --ccee----------hHhHHHHhhhhhHHHH---HHhHHHHHHH---hchhhHHHHHHHhccCCCCceeHHHHHHHHHH
Confidence 3443 2211111001100000 1333333321 12346899999999999999999999999998
Q ss_pred ccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHH
Q 020151 155 MGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 197 (330)
Q Consensus 155 lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkI 197 (330)
++.+...|- ++..+.++-...|-|+||.|+..||.+.++=+
T Consensus 576 ~~sh~~~~i--~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 576 LSSHMNGAI--SDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred HHhhcCCCc--CHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 888643333 33457777888999999999999999988844
No 40
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.97 E-value=2.5e-05 Score=76.48 Aligned_cols=145 Identities=14% Similarity=0.193 Sum_probs=100.9
Q ss_pred cccc-CC-CCCCccccHHHHHHHHHccccccccCCCCC---hhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHH
Q 020151 19 QPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLP---QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYIT 93 (330)
Q Consensus 19 ~~F~-LD-d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp---~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~ 93 (330)
.+|+ -| |+| |.||..|+-.+.+=. + .| +-++..-+..+|.+ ++|.|+.+||.
T Consensus 167 ~rFk~AD~d~d-g~lt~EEF~aFLHPE--e------~p~M~~iVi~Etl~d~Dkn------~DG~I~~eEfi-------- 223 (325)
T KOG4223|consen 167 ERFKAADQDGD-GSLTLEEFTAFLHPE--E------HPHMKDIVIAETLEDIDKN------GDGKISLEEFI-------- 223 (325)
T ss_pred HHHhhcccCCC-CcccHHHHHhccChh--h------cchHHHHHHHHHHhhcccC------CCCceeHHHHH--------
Confidence 7899 99 999 999999998855322 1 23 35788889998999 89999966654
Q ss_pred HHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChH--HHH
Q 020151 94 AIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFP--QLN 171 (330)
Q Consensus 94 aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~--v~d 171 (330)
++--...+ .=+.|.-.-..-+..|...|+|+||+|+.+||+ ++=+|...+-. ...
T Consensus 224 --gd~~~~~~-------------~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~--------~WI~P~~~d~A~~EA~ 280 (325)
T KOG4223|consen 224 --GDLYSHEG-------------NEEEPEWVLTEREQFFEFRDKNKDGKLDGDELL--------DWILPSEQDHAKAEAR 280 (325)
T ss_pred --hHHhhccC-------------CCCCcccccccHHHHHHHhhcCCCCccCHHHHh--------cccCCCCccHHHHHHH
Confidence 33333311 112232223334677888999999999999999 35567666533 356
Q ss_pred HHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchh
Q 020151 172 DILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKL 224 (330)
Q Consensus 172 ~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l 224 (330)
-++-+.|.|+||++|++|-.+ +|=+.+-++-|-.|..|
T Consensus 281 hL~~eaD~dkD~kLs~eEIl~---------------~~d~FvgSqAtdyge~L 318 (325)
T KOG4223|consen 281 HLLHEADEDKDGKLSKEEILE---------------HYDVFVGSQATDYGEDL 318 (325)
T ss_pred HHhhhhccCccccccHHHHhh---------------Ccceeeeeecccchhhc
Confidence 689999999999999998533 44445555555555554
No 41
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.85 E-value=6.8e-05 Score=61.45 Aligned_cols=69 Identities=13% Similarity=0.187 Sum_probs=54.8
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHhh-ccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHH
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNALGH-MGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 199 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~AL~~-lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~ 199 (330)
+..+|...-.+ +++||+.|++.-|.+ ++. =++...++..+++||+..|.|+||.|+..||..++-.+..
T Consensus 10 lI~~FhkYaG~-~~tLsk~Elk~Ll~~Elp~--~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~~ 79 (91)
T cd05024 10 MMLTFHKFAGE-KNYLNRDDLQKLMEKEFSE--FLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLLI 79 (91)
T ss_pred HHHHHHHHcCC-CCcCCHHHHHHHHHHHhHH--HHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 45578888744 679999999998877 321 1233445678999999999999999999999999988864
No 42
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.83 E-value=0.00019 Score=63.31 Aligned_cols=137 Identities=14% Similarity=0.286 Sum_probs=98.7
Q ss_pred hHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHH
Q 020151 13 QLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLAS 89 (330)
Q Consensus 13 ~ir~l~~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk 89 (330)
.+..|.+.|. .| ..| |+|++++.-+ +-.+|.. ..+..+...+.++...- ..-..++-|+|.-.++
T Consensus 9 ~~~e~ke~F~lfD~~gD-~ki~~~q~gdvlRalG~n-------PT~aeV~k~l~~~~~~~----~~~~rl~FE~fLpm~q 76 (152)
T KOG0030|consen 9 QMEEFKEAFLLFDRTGD-GKISGSQVGDVLRALGQN-------PTNAEVLKVLGQPKRRE----MNVKRLDFEEFLPMYQ 76 (152)
T ss_pred hHHHHHHHHHHHhccCc-ccccHHHHHHHHHHhcCC-------CcHHHHHHHHcCcccch----hhhhhhhHHHHHHHHH
Confidence 3466778889 88 999 9999999999 6666655 22567888888865550 0125778777776544
Q ss_pred HHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHH
Q 020151 90 DYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQ 169 (330)
Q Consensus 90 ~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v 169 (330)
.||.. .+...++.+++. ++-+|++++|+|...|||..|-.+|--+ +...
T Consensus 77 ----~vakn--------------------k~q~t~edfveg-LrvFDkeg~G~i~~aeLRhvLttlGekl------~eeE 125 (152)
T KOG0030|consen 77 ----QVAKN--------------------KDQGTYEDFVEG-LRVFDKEGNGTIMGAELRHVLTTLGEKL------TEEE 125 (152)
T ss_pred ----HHHhc--------------------cccCcHHHHHHH-HHhhcccCCcceeHHHHHHHHHHHHhhc------cHHH
Confidence 45544 223345555554 7889999999999999999999998754 2444
Q ss_pred HHHHHhhhccCCCcccCHHHHHHH
Q 020151 170 LNDILKKHGAEGEEELGQAQFTEL 193 (330)
Q Consensus 170 ~d~If~e~D~D~DG~Vs~eEF~~l 193 (330)
++.++.-. .|.+|.|+++.|.+.
T Consensus 126 Ve~Llag~-eD~nG~i~YE~fVk~ 148 (152)
T KOG0030|consen 126 VEELLAGQ-EDSNGCINYEAFVKH 148 (152)
T ss_pred HHHHHccc-cccCCcCcHHHHHHH
Confidence 66677655 568899999999764
No 43
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=97.61 E-value=0.00045 Score=70.32 Aligned_cols=217 Identities=14% Similarity=0.189 Sum_probs=143.4
Q ss_pred cccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChh---------HHHHH-Hhhh-cCCCCcccccccccCHHHHH
Q 020151 19 QPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQN---------LKSTA-LKHI-SGSDDDVTFRIKEFDRDHAS 85 (330)
Q Consensus 19 ~~F~-LD-d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~---------l~~~~-l~~~-~~~~~~~~~~~~~vd~eeF~ 85 (330)
=.|. +| |++ |.|...|+-.++.+-.+++++|+..-++ -++++ ...| -++ +++.++-++|.
T Consensus 237 IAFKMFD~dgn-G~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~r------g~~kLs~deF~ 309 (489)
T KOG2643|consen 237 IAFKMFDLDGN-GEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKR------GNGKLSIDEFL 309 (489)
T ss_pred eeeeeeecCCC-CcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccC------CCccccHHHHH
Confidence 4588 89 889 9999999999998888889999854421 23333 3333 233 78899977776
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCC
Q 020151 86 KLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFS 165 (330)
Q Consensus 86 ~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~ 165 (330)
+=+...-.. ++.--|.++|...+|.||......-|-..+. ++-..
T Consensus 310 ~F~e~Lq~E--------------------------------il~lEF~~~~~~~~g~Ise~DFA~~lL~~a~---~n~~~ 354 (489)
T KOG2643|consen 310 KFQENLQEE--------------------------------ILELEFERFDKGDSGAISEVDFAELLLAYAG---VNSKK 354 (489)
T ss_pred HHHHHHHHH--------------------------------HHHHHHHHhCcccccccCHHHHHHHHHHHcc---cchHh
Confidence 544332211 1333488999998899999988877766532 22111
Q ss_pred ChHHHHHHHhhhccCCCcccCHHHHHHHHH--HHHHHHH-----HHhccCceEEeccccccCCchhhHHHHhhhhhHHHh
Q 020151 166 EFPQLNDILKKHGAEGEEELGQAQFTELLR--QVLQDIV-----DALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQ 238 (330)
Q Consensus 166 ~~~v~d~If~e~D~D~DG~Vs~eEF~~lmk--kIL~~~A-----~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~ 238 (330)
-...+.++-+.++.+ +.-||++||+..++ .-+..+. -.+.+-|| +-...+++.+-+-.+ +..
T Consensus 355 k~~~lkrvk~kf~~~-~~gISl~Ef~~Ff~Fl~~l~dfd~Al~fy~~Ag~~i---------~~~~f~raa~~vtGv-eLS 423 (489)
T KOG2643|consen 355 KHKYLKRVKEKFKDD-GKGISLQEFKAFFRFLNNLNDFDIALRFYHMAGASI---------DEKTFQRAAKVVTGV-ELS 423 (489)
T ss_pred HHHHHHHHHHhccCC-CCCcCHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCC---------CHHHHHHHHHHhcCc-ccc
Confidence 122467788888877 67799999988765 2222332 34455565 333355655555554 333
Q ss_pred HHHHHHHHHhcCCCCCCCcccHHHHHhhhccccce-eccCCchhhhhhhhhh
Q 020151 239 LQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRRFY-IEEGGRREIVGMMSAI 289 (330)
Q Consensus 239 ~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~~~-~~~~~~~~~~~~~~~~ 289 (330)
+-..+-+|.-.|.++ +|++|.+|+-.+++-|--. ++.-++..+.-+|.+.
T Consensus 424 dhVvdvvF~IFD~N~-Dg~LS~~EFl~Vmk~Rmhrgl~~p~~~gl~~~~~~v 474 (489)
T KOG2643|consen 424 DHVVDVVFTIFDENN-DGTLSHKEFLAVMKRRMHRGLELPKDTGLLRYMKAV 474 (489)
T ss_pred cceeeeEEEEEccCC-CCcccHHHHHHHHHHHhhccccCCcccchHHHHHHH
Confidence 466778999999999 9999999999998544333 4555555666666653
No 44
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=97.56 E-value=0.00038 Score=64.90 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHH----HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccC
Q 020151 84 ASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFT----MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEF 159 (330)
Q Consensus 84 F~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~----~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~ 159 (330)
...++...+....+-....|+.+-.-++-.+-..-..=..|+ +-+.++|++.|.+.||+|+-.||+..|++||.-+
T Consensus 53 ~~~el~~~l~rr~~ines~~~~~~~r~s~kv~n~yteF~eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQ 132 (244)
T KOG0041|consen 53 ADQELSANLIRRDDINESQGAGVPSRDSLKVFNVYTEFSEFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQ 132 (244)
T ss_pred hHHHHHHHHHHHHHHhhccccCCcccccccccchhhhhhHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCch
Confidence 445555566666666677777777666643322221111344 4678999999999999999999999999986521
Q ss_pred CCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHH
Q 020151 160 GVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 198 (330)
Q Consensus 160 GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL 198 (330)
..--+.++++++|.|.||++|+.||.=.+++.+
T Consensus 133 ------THL~lK~mikeVded~dgklSfreflLIfrkaa 165 (244)
T KOG0041|consen 133 ------THLGLKNMIKEVDEDFDGKLSFREFLLIFRKAA 165 (244)
T ss_pred ------hhHHHHHHHHHhhcccccchhHHHHHHHHHHHh
Confidence 112389999999999999999999999888765
No 45
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.56 E-value=0.00035 Score=61.73 Aligned_cols=106 Identities=14% Similarity=0.209 Sum_probs=79.0
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccC--CCcccCHHHHHHHHHHHHHHHHH
Q 020151 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAE--GEEELGQAQFTELLRQVLQDIVD 203 (330)
Q Consensus 126 ~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D--~DG~Vs~eEF~~lmkkIL~~~A~ 203 (330)
..+.++|.-+|..+||+|+....-.+|..+ |..|..+ .+..++.+++.+ .-..++.++|.-++..+..
T Consensus 11 ~e~ke~F~lfD~~gD~ki~~~q~gdvlRal----G~nPT~a--eV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vak---- 80 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTGDGKISGSQVGDVLRAL----GQNPTNA--EVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAK---- 80 (152)
T ss_pred HHHHHHHHHHhccCcccccHHHHHHHHHHh----cCCCcHH--HHHHHHcCcccchhhhhhhhHHHHHHHHHHHHh----
Confidence 457899999999999999999999998886 6667664 345556666665 4477999999887776553
Q ss_pred HhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhcccc
Q 020151 204 ALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRR 271 (330)
Q Consensus 204 ~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~ 271 (330)
. |...--....+-.|-.||+. +|.|...|||++|...+
T Consensus 81 n-----------------------------k~q~t~edfvegLrvFDkeg-~G~i~~aeLRhvLttlG 118 (152)
T KOG0030|consen 81 N-----------------------------KDQGTYEDFVEGLRVFDKEG-NGTIMGAELRHVLTTLG 118 (152)
T ss_pred c-----------------------------cccCcHHHHHHHHHhhcccC-CcceeHHHHHHHHHHHH
Confidence 1 11111244555688899999 99999999999995433
No 46
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.53 E-value=9.3e-05 Score=48.26 Aligned_cols=28 Identities=18% Similarity=0.455 Sum_probs=25.8
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHhhc
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNALGHM 155 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~AL~~l 155 (330)
+..+|+.+|+|+||+||.+|++.++.+|
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 6789999999999999999999998764
No 47
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.49 E-value=0.00058 Score=68.80 Aligned_cols=62 Identities=16% Similarity=0.278 Sum_probs=53.2
Q ss_pred hcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHH
Q 020151 118 LGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 197 (330)
Q Consensus 118 vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkI 197 (330)
++.-..|...+..+|+.+|.|+||.|+++|+.. .+.+|+.+|.|+||.|+.+||...++..
T Consensus 326 ~~~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~-------------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~ 386 (391)
T PRK12309 326 LEGGEAFTHAAQEIFRLYDLDGDGFITREEWLG-------------------SDAVFDALDLNHDGKITPEEMRAGLGAA 386 (391)
T ss_pred hhccChhhHHHHHHHHHhCCCCCCcCcHHHHHH-------------------HHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 344456888899999999999999999999841 3678999999999999999999988865
Q ss_pred H
Q 020151 198 L 198 (330)
Q Consensus 198 L 198 (330)
.
T Consensus 387 ~ 387 (391)
T PRK12309 387 L 387 (391)
T ss_pred H
Confidence 4
No 48
>PLN02964 phosphatidylserine decarboxylase
Probab=97.44 E-value=0.00086 Score=71.46 Aligned_cols=125 Identities=10% Similarity=0.173 Sum_probs=87.3
Q ss_pred CccccHHHHHHHHHccccccccCCCCC-hhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 020151 28 SSTVTGAQLLDFAENEASSSLFGLSLP-QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVV 106 (330)
Q Consensus 28 ~G~LS~aEl~~l~~~~~~~~~fg~~lp-~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v 106 (330)
+..+|+.++..++++-.. + +.-. ...+..+|..||.+ ++|.+ ++.++.++ +.
T Consensus 118 ~~~~s~n~lv~~~e~~~t--~--f~~kqi~elkeaF~lfD~d------gdG~i--------Lg~ilrsl----G~----- 170 (644)
T PLN02964 118 TNRLSKNTLVGYCELDLF--D--FVTQEPESACESFDLLDPS------SSNKV--------VGSIFVSC----SI----- 170 (644)
T ss_pred cCCCCHHHhhhheeecHh--h--ccHHHHHHHHHHHHHHCCC------CCCcC--------HHHHHHHh----CC-----
Confidence 357889998887755211 1 1122 24567789999999 67764 33333322 21
Q ss_pred EEeCchhHHHhhcCchh-HHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCccc
Q 020151 107 CVLDGNMLKLFLGNEDD-FTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEEL 185 (330)
Q Consensus 107 ~v~DGS~L~~~vede~~-F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~V 185 (330)
.++.. -..++..+|+.+|.|++|.|+.+|+..++..++. .+ ..+.+..+|+.+|.|++|.|
T Consensus 171 ------------~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~----~~--seEEL~eaFk~fDkDgdG~I 232 (644)
T PLN02964 171 ------------EDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN----LV--AANKKEELFKAADLNGDGVV 232 (644)
T ss_pred ------------CCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc----CC--CHHHHHHHHHHhCCCCCCcC
Confidence 11221 1235899999999999999999999999987643 11 23458999999999999999
Q ss_pred CHHHHHHHHHHH
Q 020151 186 GQAQFTELLRQV 197 (330)
Q Consensus 186 s~eEF~~lmkkI 197 (330)
+.+||+.+|+..
T Consensus 233 s~dEL~~vL~~~ 244 (644)
T PLN02964 233 TIDELAALLALQ 244 (644)
T ss_pred CHHHHHHHHHhc
Confidence 999999988873
No 49
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.36 E-value=0.00016 Score=47.20 Aligned_cols=27 Identities=15% Similarity=0.582 Sum_probs=25.0
Q ss_pred HHHHHhhhccCCCcccCHHHHHHHHHH
Q 020151 170 LNDILKKHGAEGEEELGQAQFTELLRQ 196 (330)
Q Consensus 170 ~d~If~e~D~D~DG~Vs~eEF~~lmkk 196 (330)
++.+|+.+|.|+||.||.+||+..|++
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 578999999999999999999999875
No 50
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=97.29 E-value=0.0012 Score=53.29 Aligned_cols=66 Identities=23% Similarity=0.372 Sum_probs=50.9
Q ss_pred HHHHHhhhc-cCCCc-ccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHH
Q 020151 170 LNDILKKHG-AEGEE-ELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFR 247 (330)
Q Consensus 170 ~d~If~e~D-~D~DG-~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~ 247 (330)
+-++|..|| .|++| .|+.+||+++|++.+.. .+.++ . -...+..+++
T Consensus 12 ~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~-----------------------------~~~~~-~-~~~~v~~i~~ 60 (93)
T cd05026 12 LIRIFHNYSGKEGDRYKLSKGELKELLQRELTD-----------------------------FLSSQ-K-DPMLVDKIMN 60 (93)
T ss_pred HHHHHHHHHccCCCCCEECHHHHHHHHHHHhHH-----------------------------hcccc-c-CHHHHHHHHH
Confidence 567799998 78998 59999999998876531 11111 1 1468899999
Q ss_pred hcCCCCCCCcccHHHHHhhh
Q 020151 248 MMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 248 ~~d~d~~~G~isk~eLr~~l 267 (330)
.+|+++ +|+|+-+|+..++
T Consensus 61 elD~n~-dG~Idf~EF~~l~ 79 (93)
T cd05026 61 DLDSNK-DNEVDFNEFVVLV 79 (93)
T ss_pred HhCCCC-CCCCCHHHHHHHH
Confidence 999998 9999999987665
No 51
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.29 E-value=0.00025 Score=59.67 Aligned_cols=102 Identities=10% Similarity=0.194 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCch---hHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhcc
Q 020151 80 DRDHASKLASDYITAIADELKDDPLVVCVLDGN---MLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMG 156 (330)
Q Consensus 80 d~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS---~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lg 156 (330)
...+|..-|.+.+..+...+...+..- +++ ...............+.=.|.+||.|+||.|++.||++....+
T Consensus 8 e~~~F~~RL~dWf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l- 83 (113)
T PF10591_consen 8 ELSQFPRRLLDWFKNLMEQSKSRDELS---DHYIELLKRDESSSYSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL- 83 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCC---SS-HHHHHHHHHHTGGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccc---cccccccccccccchhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH-
Confidence 356777777777777655554421111 110 1122233444566778888999999999999999999654433
Q ss_pred ccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHH
Q 020151 157 VEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTE 192 (330)
Q Consensus 157 v~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~ 192 (330)
+|+.. =+...|+..|.|+||.||..|+..
T Consensus 84 ----~~~e~---C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 84 ----MPPEH---CARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp ----STTGG---GHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred ----hhhHH---HHHHHHHHcCCCCCCCCCHHHHcc
Confidence 23222 267899999999999999999864
No 52
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.23 E-value=0.00032 Score=45.56 Aligned_cols=29 Identities=21% Similarity=0.379 Sum_probs=25.3
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHh-hcc
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNALG-HMG 156 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~AL~-~lg 156 (330)
+..+|+.+|+|+||+|+.+|++.+|. .+|
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 57899999999999999999999999 464
No 53
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=97.22 E-value=0.0011 Score=59.32 Aligned_cols=105 Identities=13% Similarity=0.184 Sum_probs=81.7
Q ss_pred HHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcC
Q 020151 57 LKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLD 136 (330)
Q Consensus 57 l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD 136 (330)
....+..-|+.| ++|.++-+.|..-++-+-+-.-..|| +.=+|+-.|
T Consensus 72 fk~ri~e~FSeD------G~GnlsfddFlDmfSV~sE~APrdlK---------------------------~~YAFkIYD 118 (189)
T KOG0038|consen 72 FKRRICEVFSED------GRGNLSFDDFLDMFSVFSEMAPRDLK---------------------------AKYAFKIYD 118 (189)
T ss_pred HHHHHHHHhccC------CCCcccHHHHHHHHHHHHhhChHHhh---------------------------hhheeEEee
Confidence 344555666777 79999999999888754433222332 344699999
Q ss_pred CCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHH
Q 020151 137 TEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLR 195 (330)
Q Consensus 137 ~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmk 195 (330)
-|+|+.|....|...+.+++.+ ++.+.+..-+.+.|+++.|-|+||+++.+||..++-
T Consensus 119 fd~D~~i~~~DL~~~l~~lTr~-eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~ 176 (189)
T KOG0038|consen 119 FDGDEFIGHDDLEKTLTSLTRD-ELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVIL 176 (189)
T ss_pred cCCCCcccHHHHHHHHHHHhhc-cCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Confidence 9999999999999999999885 666555455689999999999999999999987654
No 54
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.17 E-value=0.00098 Score=45.87 Aligned_cols=61 Identities=10% Similarity=0.205 Sum_probs=48.9
Q ss_pred HHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhc
Q 020151 170 LNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMM 249 (330)
Q Consensus 170 ~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~ 249 (330)
+..+|..+|.|++|.|+.++|...++..- .| ...+.+..+|+.+
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~---------~~---------------------------~~~~~~~~~~~~~ 45 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG---------EG---------------------------LSEEEIDEMIREV 45 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC---------CC---------------------------CCHHHHHHHHHHh
Confidence 46789999999999999999988876532 01 1136777899999
Q ss_pred CCCCCCCcccHHHHHhhh
Q 020151 250 DTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 250 d~d~~~G~isk~eLr~~l 267 (330)
+.++ +|.|+.+++..++
T Consensus 46 ~~~~-~~~l~~~ef~~~~ 62 (63)
T cd00051 46 DKDG-DGKIDFEEFLELM 62 (63)
T ss_pred CCCC-CCeEeHHHHHHHh
Confidence 9998 9999999998765
No 55
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=97.16 E-value=0.0044 Score=63.34 Aligned_cols=174 Identities=12% Similarity=0.106 Sum_probs=116.3
Q ss_pred CC-CCCCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCC
Q 020151 23 LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKD 101 (330)
Q Consensus 23 LD-d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~ 101 (330)
.+ +++ |.||++|-.=|.-+- +.|..=..=+|+-||.| ++|.||++||..+.+-+.. +
T Consensus 208 ~~lg~~-GLIsfSdYiFLlTlL--------S~p~~~F~IAFKMFD~d------gnG~IdkeEF~~v~~li~s-------Q 265 (489)
T KOG2643|consen 208 YKLGES-GLISFSDYIFLLTLL--------SIPERNFRIAFKMFDLD------GNGEIDKEEFETVQQLIRS-------Q 265 (489)
T ss_pred EEcCCC-CeeeHHHHHHHHHHH--------ccCcccceeeeeeeecC------CCCcccHHHHHHHHHHHHh-------c
Confidence 44 556 999999987743221 24555555679999999 8999999999988776553 3
Q ss_pred CCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCC
Q 020151 102 DPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEG 181 (330)
Q Consensus 102 ~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~ 181 (330)
..+-+.--|+ ++....-+-.++..+...| +-++++|+||.+|..+++++|--+ .+.-=|.++|...
T Consensus 266 ~~~g~~hrd~--~tt~~s~~~~~nsaL~~yF--FG~rg~~kLs~deF~~F~e~Lq~E----------il~lEF~~~~~~~ 331 (489)
T KOG2643|consen 266 TSVGVRHRDH--FTTGNSFKVEVNSALLTYF--FGKRGNGKLSIDEFLKFQENLQEE----------ILELEFERFDKGD 331 (489)
T ss_pred cccceecccC--ccccceehhhhhhhHHHHh--hccCCCccccHHHHHHHHHHHHHH----------HHHHHHHHhCccc
Confidence 3344444444 3333333334555566555 456688999999999999997443 2233388999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHH
Q 020151 182 EEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKS 261 (330)
Q Consensus 182 DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~ 261 (330)
.|.|+...|++++-... |...++ ..+.|+.+=+..+.+. -.||.+
T Consensus 332 ~g~Ise~DFA~~lL~~a----------------------~~n~~~-----------k~~~lkrvk~kf~~~~--~gISl~ 376 (489)
T KOG2643|consen 332 SGAISEVDFAELLLAYA----------------------GVNSKK-----------KHKYLKRVKEKFKDDG--KGISLQ 376 (489)
T ss_pred ccccCHHHHHHHHHHHc----------------------ccchHh-----------HHHHHHHHHHhccCCC--CCcCHH
Confidence 99999999998764322 222222 2456666766666643 347888
Q ss_pred HHHhhh
Q 020151 262 DFDDFI 267 (330)
Q Consensus 262 eLr~~l 267 (330)
|...|.
T Consensus 377 Ef~~Ff 382 (489)
T KOG2643|consen 377 EFKAFF 382 (489)
T ss_pred HHHHHH
Confidence 888776
No 56
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=97.08 E-value=0.0026 Score=51.55 Aligned_cols=63 Identities=27% Similarity=0.363 Sum_probs=51.0
Q ss_pred HHHHHhhhcc-CCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHh
Q 020151 170 LNDILKKHGA-EGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRM 248 (330)
Q Consensus 170 ~d~If~e~D~-D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~ 248 (330)
+-.+|..||. +++|.|+..||+.+|++-+. . ++++ ..+++.+++.
T Consensus 10 l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg--------------------------~---~ls~-----~~~v~~mi~~ 55 (89)
T cd05022 10 LVSNFHKASVKGGKESLTASEFQELLTQQLP--------------------------H---LLKD-----VEGLEEKMKN 55 (89)
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHHhh--------------------------h---hccC-----HHHHHHHHHH
Confidence 5778999999 99999999999999887432 0 3333 1568889999
Q ss_pred cCCCCCCCcccHHHHHhhh
Q 020151 249 MDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 249 ~d~d~~~G~isk~eLr~~l 267 (330)
+|.++ +|+|+-+|+-..+
T Consensus 56 ~D~d~-DG~I~F~EF~~l~ 73 (89)
T cd05022 56 LDVNQ-DSKLSFEEFWELI 73 (89)
T ss_pred hCCCC-CCCCcHHHHHHHH
Confidence 99999 9999999986665
No 57
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=97.06 E-value=0.0038 Score=49.69 Aligned_cols=66 Identities=18% Similarity=0.382 Sum_probs=50.5
Q ss_pred HHHHHhhhc-cCCCc-ccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHH
Q 020151 170 LNDILKKHG-AEGEE-ELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFR 247 (330)
Q Consensus 170 ~d~If~e~D-~D~DG-~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~ 247 (330)
+.++|+.+| .|++| .|+.+||+.+|+.-+... ++..| -...++.+|+
T Consensus 11 l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~---~~~~~----------------------------s~~~v~~i~~ 59 (92)
T cd05025 11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSDF---LDAQK----------------------------DADAVDKIMK 59 (92)
T ss_pred HHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHH---ccCCC----------------------------CHHHHHHHHH
Confidence 678999997 99999 599999999997644310 00011 1367889999
Q ss_pred hcCCCCCCCcccHHHHHhhh
Q 020151 248 MMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 248 ~~d~d~~~G~isk~eLr~~l 267 (330)
.+|.++ +|.|+-+++..++
T Consensus 60 ~~D~d~-~G~I~f~eF~~l~ 78 (92)
T cd05025 60 ELDENG-DGEVDFQEFVVLV 78 (92)
T ss_pred HHCCCC-CCcCcHHHHHHHH
Confidence 999999 9999988887665
No 58
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.02 E-value=0.00064 Score=42.79 Aligned_cols=24 Identities=29% Similarity=0.538 Sum_probs=21.6
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHH
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNA 151 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~A 151 (330)
+.+.|+.+|.|+||+||.+|++..
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHH
Confidence 467899999999999999999964
No 59
>PF14658 EF-hand_9: EF-hand domain
Probab=96.99 E-value=0.00096 Score=51.81 Aligned_cols=62 Identities=21% Similarity=0.394 Sum_probs=52.9
Q ss_pred HHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCC-cccCHHHHHHHHHH
Q 020151 130 NLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGE-EELGQAQFTELLRQ 196 (330)
Q Consensus 130 ~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~D-G~Vs~eEF~~lmkk 196 (330)
.+|..+|.++.|.+....|...|+.+|.- .|+. +.++.+.+++|.++. |.|+.+.|+..|++
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~--~p~e---~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGR--SPEE---SELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCC--CCcH---HHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 47999999999999999999999997652 2222 358999999999988 99999999999985
No 60
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=96.96 E-value=0.0026 Score=46.33 Aligned_cols=59 Identities=12% Similarity=0.179 Sum_probs=48.9
Q ss_pred ccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHH
Q 020151 20 PLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITA 94 (330)
Q Consensus 20 ~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~a 94 (330)
.|. +| +++ |.||..|++. +..++ +|+.....+++.++.+ ++|.|+.++|...++-+..+
T Consensus 4 ~F~~~D~~~~-G~i~~~el~~~l~~~g---------~~~~~~~~i~~~~d~~------~~g~i~~~ef~~~~~~~~~~ 65 (67)
T cd00052 4 IFRSLDPDGD-GLISGDEARPFLGKSG---------LPRSVLAQIWDLADTD------KDGKLDKEEFAIAMHLIALA 65 (67)
T ss_pred HHHHhCCCCC-CcCcHHHHHHHHHHcC---------CCHHHHHHHHHHhcCC------CCCcCCHHHHHHHHHHHHHH
Confidence 478 89 888 9999999999 65432 4677789999999998 79999999998888776654
No 61
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=96.93 E-value=0.0041 Score=70.88 Aligned_cols=104 Identities=16% Similarity=0.286 Sum_probs=79.4
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCC-ChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhc
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFS-EFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALA 206 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~-~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~ 206 (330)
..-+|++||++++|.|.+.+.+.||..+|-.+.+-..+ ..|.+.+++.-+|.+.+|.|++.+|...|-+--
T Consensus 2255 Fs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~E-------- 2326 (2399)
T KOG0040|consen 2255 FSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKE-------- 2326 (2399)
T ss_pred HHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhcc--------
Confidence 34579999999999999999999999999865332222 235699999999999999999999988775311
Q ss_pred cCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhh
Q 020151 207 DKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 207 ~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l 267 (330)
++| | +++ .+..+||+.++..+ --++|+++..-|
T Consensus 2327 --------TeN------I------~s~------~eIE~AfraL~a~~--~yvtke~~~~~l 2359 (2399)
T KOG0040|consen 2327 --------TEN------I------LSS------EEIEDAFRALDAGK--PYVTKEELYQNL 2359 (2399)
T ss_pred --------ccc------c------cch------HHHHHHHHHhhcCC--ccccHHHHHhcC
Confidence 122 2 222 47778999999954 678888886554
No 62
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=96.86 E-value=0.0026 Score=50.99 Aligned_cols=68 Identities=24% Similarity=0.219 Sum_probs=54.5
Q ss_pred hhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHH
Q 020151 12 TQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (330)
Q Consensus 12 s~ir~l~~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~l 88 (330)
+++..+...|. +| +++ |.||..|++. +... ++|+..+..++..++.+ .++.|+.++|...+
T Consensus 7 ~~~~~l~~~F~~~D~d~~-G~Is~~el~~~l~~~---------~~~~~ev~~i~~~~d~~------~~g~I~~~eF~~~~ 70 (96)
T smart00027 7 EDKAKYEQIFRSLDKNQD-GTVTGAQAKPILLKS---------GLPQTLLAKIWNLADID------NDGELDKDEFALAM 70 (96)
T ss_pred HHHHHHHHHHHHhCCCCC-CeEeHHHHHHHHHHc---------CCCHHHHHHHHHHhcCC------CCCCcCHHHHHHHH
Confidence 56777888999 99 899 9999999999 5432 25677888999999988 79999999998766
Q ss_pred HHHHHHH
Q 020151 89 SDYITAI 95 (330)
Q Consensus 89 k~~l~ai 95 (330)
+.+-...
T Consensus 71 ~~~~~~~ 77 (96)
T smart00027 71 HLIYRKL 77 (96)
T ss_pred HHHHHHH
Confidence 6554433
No 63
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=96.84 E-value=0.0067 Score=48.53 Aligned_cols=67 Identities=12% Similarity=0.264 Sum_probs=50.8
Q ss_pred HHHHHhhhcc-CC-CcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHH
Q 020151 170 LNDILKKHGA-EG-EEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFR 247 (330)
Q Consensus 170 ~d~If~e~D~-D~-DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~ 247 (330)
+..+|..+|. |+ +|.|+.+|++.+|+..+.. .++..| -+++++.+|+
T Consensus 10 l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~---~lg~~~----------------------------s~~ei~~~~~ 58 (94)
T cd05031 10 LILTFHRYAGKDGDKNTLSRKELKKLMEKELSE---FLKNQK----------------------------DPMAVDKIMK 58 (94)
T ss_pred HHHHHHHHhccCCCCCeECHHHHHHHHHHHhHH---Hhhccc----------------------------cHHHHHHHHH
Confidence 6778999997 97 6999999999998864321 111111 1367888999
Q ss_pred hcCCCCCCCcccHHHHHhhhc
Q 020151 248 MMDTWDMVYLLTKSDFDDFIP 268 (330)
Q Consensus 248 ~~d~d~~~G~isk~eLr~~l~ 268 (330)
.+|.++ +|+|+-+++..++.
T Consensus 59 ~~D~~~-dg~I~f~eF~~l~~ 78 (94)
T cd05031 59 DLDQNR-DGKVNFEEFVSLVA 78 (94)
T ss_pred HhCCCC-CCcCcHHHHHHHHH
Confidence 999998 99999999877663
No 64
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=96.83 E-value=0.0054 Score=49.44 Aligned_cols=66 Identities=17% Similarity=0.346 Sum_probs=51.2
Q ss_pred HHHHHhh-hccCCCc-ccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHH
Q 020151 170 LNDILKK-HGAEGEE-ELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFR 247 (330)
Q Consensus 170 ~d~If~e-~D~D~DG-~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~ 247 (330)
+..+|.. +|.|+++ .|+++||+.++++-+.. +++++ ....++..+|+
T Consensus 11 l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~-----------------------------~~~~~--~~~~~~~~ll~ 59 (89)
T cd05023 11 LIAVFQKYAGKDGDSYQLSKTEFLSFMNTELAS-----------------------------FTKNQ--KDPGVLDRMMK 59 (89)
T ss_pred HHHHHHHHhccCCCcCeECHHHHHHHHHHhhhH-----------------------------hhcCC--CCHHHHHHHHH
Confidence 5678998 7888886 99999999999876531 22221 11377888999
Q ss_pred hcCCCCCCCcccHHHHHhhh
Q 020151 248 MMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 248 ~~d~d~~~G~isk~eLr~~l 267 (330)
.+|.++ +|+|+-+|+-.++
T Consensus 60 ~~D~d~-DG~I~f~EF~~l~ 78 (89)
T cd05023 60 KLDLNS-DGQLDFQEFLNLI 78 (89)
T ss_pred HcCCCC-CCcCcHHHHHHHH
Confidence 999998 9999999987665
No 65
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.79 E-value=0.0055 Score=51.14 Aligned_cols=69 Identities=16% Similarity=0.306 Sum_probs=55.6
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHh
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDAL 205 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L 205 (330)
-.++|..+|. ++|.||-+..++.|.+- |+| ..++..|....|.|+||.++.+||+-.|+=|-..+...+
T Consensus 12 y~~~F~~l~~-~~g~isg~~a~~~f~~S----~L~----~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~~~~~~~~ 80 (104)
T PF12763_consen 12 YDQIFQSLDP-QDGKISGDQAREFFMKS----GLP----RDVLAQIWNLADIDNDGKLDFEEFAIAMHLINRKLNGNG 80 (104)
T ss_dssp HHHHHHCTSS-STTEEEHHHHHHHHHHT----TSS----HHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCC-CCCeEeHHHHHHHHHHc----CCC----HHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHHHHhcCCC
Confidence 5688999995 58999999999999985 333 356899999999999999999999998887665444333
No 66
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=96.76 E-value=0.0042 Score=63.73 Aligned_cols=132 Identities=14% Similarity=0.155 Sum_probs=94.4
Q ss_pred EEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCccc
Q 020151 106 VCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEEL 185 (330)
Q Consensus 106 v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~V 185 (330)
|-++..|.|+++-+.-..+...+...|+..|.+++|+||.+.-..|++++.- +|+|=..- .. +.+....||.|
T Consensus 444 ~~~vEeSAlk~Lrerl~s~~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~-L~LPWr~L----~~--kla~~s~d~~v 516 (631)
T KOG0377|consen 444 MGIVEESALKELRERLRSHRSDLEDEFRKYDPKKSGKLSISHWAKCMENITG-LNLPWRLL----RP--KLANGSDDGKV 516 (631)
T ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhc-CCCcHHHh----hh--hccCCCcCcce
Confidence 4467889999999988889999999999999999999999999999999643 46662221 11 12344567777
Q ss_pred CHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHh
Q 020151 186 GQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDD 265 (330)
Q Consensus 186 s~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~ 265 (330)
.+.+-.+.++.-. | +.+ -|+.|-+ .+-+|| ..|..+|+-+|+|+ +|.||-+|+|.
T Consensus 517 ~Y~~~~~~l~~e~----------~----~~e---a~~slve--tLYr~k-----s~LetiF~~iD~D~-SG~isldEF~~ 571 (631)
T KOG0377|consen 517 EYKSTLDNLDTEV----------I----LEE---AGSSLVE--TLYRNK-----SSLETIFNIIDADN-SGEISLDEFRT 571 (631)
T ss_pred ehHhHHHHhhhhh----------H----HHH---HHhHHHH--HHHhch-----hhHHHHHHHhccCC-CCceeHHHHHH
Confidence 7665554443211 0 101 1333322 366665 88999999999999 99999999999
Q ss_pred hhcc
Q 020151 266 FIPM 269 (330)
Q Consensus 266 ~l~~ 269 (330)
..++
T Consensus 572 a~~l 575 (631)
T KOG0377|consen 572 AWKL 575 (631)
T ss_pred HHHH
Confidence 8743
No 67
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.70 E-value=0.011 Score=59.77 Aligned_cols=103 Identities=17% Similarity=0.237 Sum_probs=70.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccc
Q 020151 78 EFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGV 157 (330)
Q Consensus 78 ~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv 157 (330)
.+|+.+|+-.+.+ -+||-++-. ..|+.|..|..+++..+...+..+..
T Consensus 281 ~~~e~~f~~~~~~--~~ma~ekl~----------egi~~F~~d~~~L~~~i~~~~~~~~~-------------------- 328 (391)
T PRK12309 281 HMDRATFDKMHAE--DRMASEKLD----------EGIKGFSKALETLEKLLAHRLARLEG-------------------- 328 (391)
T ss_pred CCCHHHHHHHhcc--CchHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhc--------------------
Confidence 4677778777762 233322222 34577888888787777776643221
Q ss_pred cCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHH
Q 020151 158 EFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKA 237 (330)
Q Consensus 158 ~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~ 237 (330)
.++.. ..+..+|+.+|.|+||.|+++||.. .
T Consensus 329 ---~~~~~--~~l~~aF~~~D~dgdG~Is~~E~~~-------------------------------~------------- 359 (391)
T PRK12309 329 ---GEAFT--HAAQEIFRLYDLDGDGFITREEWLG-------------------------------S------------- 359 (391)
T ss_pred ---cChhh--HHHHHHHHHhCCCCCCcCcHHHHHH-------------------------------H-------------
Confidence 11111 1366789999999999999999931 1
Q ss_pred hHHHHHHHHHhcCCCCCCCcccHHHHHhhh
Q 020151 238 QLQCREQLFRMMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 238 ~~~~l~~~F~~~d~d~~~G~isk~eLr~~l 267 (330)
..+|..+|.|+ +|+||++|++.++
T Consensus 360 -----~~~F~~~D~d~-DG~Is~eEf~~~~ 383 (391)
T PRK12309 360 -----DAVFDALDLNH-DGKITPEEMRAGL 383 (391)
T ss_pred -----HHHHHHhCCCC-CCCCcHHHHHHHH
Confidence 12799999999 9999999999987
No 68
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.57 E-value=0.0021 Score=40.43 Aligned_cols=25 Identities=20% Similarity=0.563 Sum_probs=22.0
Q ss_pred HHHHHhhhccCCCcccCHHHHHHHH
Q 020151 170 LNDILKKHGAEGEEELGQAQFTELL 194 (330)
Q Consensus 170 ~d~If~e~D~D~DG~Vs~eEF~~lm 194 (330)
++..|+.+|.|+||.||.+||.+++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 3568999999999999999998864
No 69
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=96.56 E-value=0.0075 Score=48.49 Aligned_cols=72 Identities=11% Similarity=0.177 Sum_probs=53.1
Q ss_pred Hhhhhcccc-CC--CCCCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHH
Q 020151 14 LRSLSQPLA-LP--TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASD 90 (330)
Q Consensus 14 ir~l~~~F~-LD--d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~ 90 (330)
|-.+++.|. .+ ++++|.||.+||+.+.....+ +|..+++..++.+++.++.+ ++|.|+-++|...+..
T Consensus 9 ~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~---lg~k~t~~ev~~m~~~~D~d------~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 9 IGLLVAIFHKYSGREGDKNTLSKKELKELIQKELT---IGSKLQDAEIAKLMEDLDRN------KDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHh---cCCCCCHHHHHHHHHHhcCC------CCCCCcHHHHHHHHHH
Confidence 445556777 66 564599999999994421100 23447788999999999999 8999999999887777
Q ss_pred HHHH
Q 020151 91 YITA 94 (330)
Q Consensus 91 ~l~a 94 (330)
+..|
T Consensus 80 l~~~ 83 (88)
T cd05029 80 LALI 83 (88)
T ss_pred HHHH
Confidence 6654
No 70
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=96.49 E-value=0.0047 Score=52.46 Aligned_cols=56 Identities=9% Similarity=-0.001 Sum_probs=46.8
Q ss_pred hhcccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHH
Q 020151 17 LSQPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLAS 89 (330)
Q Consensus 17 l~~~F~-LD-d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk 89 (330)
+.-.|. +| |+| |.||.+||.++. ++.+.+.....|+.+|.+ ++|.||.+||..-|.
T Consensus 50 l~w~F~~lD~d~D-G~Ls~~EL~~~~----------l~~~e~~~~~f~~~~D~n------~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 50 VGWMFNQLDGNYD-GKLSHHELAPIR----------LDPNEHCIKPFFESCDLD------KDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHCCCCC-CcCCHHHHHHHH----------ccchHHHHHHHHHHHCCC------CCCCCCHHHHHHHHh
Confidence 346788 99 999 999999999854 123467889999999999 899999999998773
No 71
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=96.45 E-value=0.0095 Score=47.87 Aligned_cols=73 Identities=15% Similarity=0.165 Sum_probs=53.0
Q ss_pred Hhhhhcccc-CC--CCCCc-cccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHH
Q 020151 14 LRSLSQPLA-LP--TSDSS-TVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLAS 89 (330)
Q Consensus 14 ir~l~~~F~-LD--d~D~G-~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk 89 (330)
|-.+++.|. +| +++ | .|+..||+.+....... ..|...++..++.+++.++.+ ++|.|+-++|...+.
T Consensus 7 ~~~l~~aF~~fD~~dgd-G~~I~~~eL~~ll~~~~~~-~lg~~~~~~~v~~~i~~~D~n------~dG~v~f~eF~~li~ 78 (88)
T cd05027 7 MVALIDVFHQYSGREGD-KHKLKKSELKELINNELSH-FLEEIKEQEVVDKVMETLDSD------GDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHHHhcccCCC-cCEECHHHHHHHHHHHhHH-HhcCCCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHH
Confidence 445667788 86 677 9 69999999955442211 112224567899999999988 899999999988777
Q ss_pred HHHHH
Q 020151 90 DYITA 94 (330)
Q Consensus 90 ~~l~a 94 (330)
.+..+
T Consensus 79 ~~~~~ 83 (88)
T cd05027 79 MVTTA 83 (88)
T ss_pred HHHHH
Confidence 66543
No 72
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=96.33 E-value=0.0033 Score=40.70 Aligned_cols=27 Identities=11% Similarity=0.170 Sum_probs=23.8
Q ss_pred HHHHHHHhcCCCCCCCcccHHHHHhhhc
Q 020151 241 CREQLFRMMDTWDMVYLLTKSDFDDFIP 268 (330)
Q Consensus 241 ~l~~~F~~~d~d~~~G~isk~eLr~~l~ 268 (330)
+|+.+|+.+|+|+ +|.||.+||+.+|.
T Consensus 1 ~l~~~F~~~D~d~-dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDG-DGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTS-SSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCC-CCcCcHHHHHHHHH
Confidence 3678999999999 99999999999986
No 73
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=96.16 E-value=0.013 Score=56.58 Aligned_cols=200 Identities=13% Similarity=0.185 Sum_probs=116.6
Q ss_pred hhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHH-
Q 020151 17 LSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYI- 92 (330)
Q Consensus 17 l~~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l- 92 (330)
+...|+ .| |-| |+||-.||+. +++--+. ||-- .-+.-.--|+..+.+ ++|.|+-+||.-.+...-
T Consensus 103 lmviFsKvDVNtD-rkisAkEmqrwImektaE--Hfqe--ameeSkthFraVDpd------gDGhvsWdEykvkFlaskg 171 (362)
T KOG4251|consen 103 LMVIFSKVDVNTD-RKISAKEMQRWIMEKTAE--HFQE--AMEESKTHFRAVDPD------GDGHVSWDEYKVKFLASKG 171 (362)
T ss_pred HHHHHhhcccCcc-ccccHHHHHHHHHHHHHH--HHHH--HHhhhhhheeeeCCC------CCCceehhhhhhHHHhhcC
Confidence 336799 99 777 9999999999 7765433 2210 011112224445556 789999999887764321
Q ss_pred -----HHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCC-CCcccHHHHHHHHhhccccCCCCCCCC
Q 020151 93 -----TAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTED-EGKVCKGEIQNALGHMGVEFGVPPFSE 166 (330)
Q Consensus 93 -----~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~-DG~LS~~ELr~AL~~lgv~~GlPP~~~ 166 (330)
.++|-.|.. |. +.=+..+.|...+...+-+.|... |=.|+..|...+|- |..+.
T Consensus 172 hsekevadairlne-el-----------kVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLH--------PEhSr 231 (362)
T KOG4251|consen 172 HSEKEVADAIRLNE-EL-----------KVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLH--------PEHSR 231 (362)
T ss_pred cchHHHHHHhhccC-cc-----------cccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcC--------hHhhh
Confidence 144444444 11 111222344444556667777643 33445566554432 11221
Q ss_pred ---hHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHH
Q 020151 167 ---FPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCRE 243 (330)
Q Consensus 167 ---~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~ 243 (330)
-..+.+|+..+|.|+|..+|+.||..+. +--+ +| -.|.++.+ .++. ...+
T Consensus 232 gmLrfmVkeivrdlDqdgDkqlSvpeFislp---------------vGTV--en-qqgqdidd--nwvk-------dRkk 284 (362)
T KOG4251|consen 232 GMLRFMVKEIVRDLDQDGDKQLSVPEFISLP---------------VGTV--EN-QQGQDIDD--NWVK-------DRKK 284 (362)
T ss_pred hhHHHHHHHHHHHhccCCCeeecchhhhcCC---------------Ccch--hh-hhccchHH--HHHH-------HHHH
Confidence 1237788889999999999999996642 2111 11 24555544 1111 2222
Q ss_pred HHHHhcCCCCCCCcccHHHHHhhhccccceec
Q 020151 244 QLFRMMDTWDMVYLLTKSDFDDFIPMRRFYIE 275 (330)
Q Consensus 244 ~~F~~~d~d~~~G~isk~eLr~~l~~~~~~~~ 275 (330)
.-=..+|.++ +|+.|.+||.++..-++++.-
T Consensus 285 EFeElIDsNh-DGivTaeELe~y~dP~n~~~a 315 (362)
T KOG4251|consen 285 EFEELIDSNH-DGIVTAEELEDYVDPQNFRLA 315 (362)
T ss_pred HHHHHhhcCC-ccceeHHHHHhhcCchhhhhh
Confidence 2335678999 999999999999866666543
No 74
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=96.10 E-value=0.017 Score=41.20 Aligned_cols=50 Identities=8% Similarity=0.122 Sum_probs=42.6
Q ss_pred CccccHHHHHH-HHHccccccccCCC-CChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHH
Q 020151 28 SSTVTGAQLLD-FAENEASSSLFGLS-LPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASD 90 (330)
Q Consensus 28 ~G~LS~aEl~~-l~~~~~~~~~fg~~-lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~ 90 (330)
+|.||.+||+. +..+ |+. +++..+..+|+.+|.+ ++|.|+.+||...+++
T Consensus 2 ~G~i~~~~~~~~l~~~-------g~~~~s~~e~~~l~~~~D~~------~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 2 DGKITREEFRRALSKL-------GIKDLSEEEVDRLFREFDTD------GDGYISFDEFISMMQR 53 (54)
T ss_dssp SSEEEHHHHHHHHHHT-------TSSSSCHHHHHHHHHHHTTS------SSSSEEHHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHh-------CCCCCCHHHHHHHHHhcccC------CCCCCCHHHHHHHHHh
Confidence 39999999999 5433 355 7888999999999999 8999999999988764
No 75
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=96.07 E-value=0.025 Score=58.30 Aligned_cols=134 Identities=15% Similarity=0.158 Sum_probs=92.1
Q ss_pred cccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHH
Q 020151 19 QPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIA 96 (330)
Q Consensus 19 ~~F~-LD-d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiA 96 (330)
-+|- || |+| |.|+.++|.....-- +..-+++-||++..++ - +...+|.+|-+ +++-+|-
T Consensus 282 ~kFweLD~Dhd-~lidk~~L~ry~d~t---------lt~~ivdRIFs~v~r~-~-~~~~eGrmdyk-------dFv~Fil 342 (493)
T KOG2562|consen 282 CKFWELDTDHD-GLIDKEDLKRYGDHT---------LTERIVDRIFSQVPRG-F-TVKVEGRMDYK-------DFVDFIL 342 (493)
T ss_pred HHHhhhccccc-cccCHHHHHHHhccc---------hhhHHHHHHHhhcccc-c-eeeecCcccHH-------HHHHHHH
Confidence 4567 99 999 999999998865322 2367888899855555 1 11257788833 3444443
Q ss_pred HHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhcc---ccCCCCCCCChHHHHHH
Q 020151 97 DELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMG---VEFGVPPFSEFPQLNDI 173 (330)
Q Consensus 97 d~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lg---v~~GlPP~~~~~v~d~I 173 (330)
+.-.+ + =...++=.|+-+|.+++|.|+..||+-+.+... ..+|..|-.=..+..+|
T Consensus 343 A~e~k--------------------~-t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi 401 (493)
T KOG2562|consen 343 AEEDK--------------------D-TPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQI 401 (493)
T ss_pred HhccC--------------------C-CccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHH
Confidence 33222 1 234588899999999999999999997766532 23343333323458888
Q ss_pred HhhhccCCCcccCHHHHHH
Q 020151 174 LKKHGAEGEEELGQAQFTE 192 (330)
Q Consensus 174 f~e~D~D~DG~Vs~eEF~~ 192 (330)
+..+..-..++|+++.|+.
T Consensus 402 ~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 402 RDMVKPEDENKITLQDLKG 420 (493)
T ss_pred HHHhCccCCCceeHHHHhh
Confidence 9999877899999999977
No 76
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=96.06 E-value=0.029 Score=43.84 Aligned_cols=66 Identities=15% Similarity=0.261 Sum_probs=50.0
Q ss_pred HHHHHhhhcc--CCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHH
Q 020151 170 LNDILKKHGA--EGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFR 247 (330)
Q Consensus 170 ~d~If~e~D~--D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~ 247 (330)
+..+|..+|. |++|.|+.+||...++..+. .|. +... -.+.++.+|+
T Consensus 10 l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g--------~~~----------~~~~-------------~~~ei~~i~~ 58 (88)
T cd00213 10 IIDVFHKYSGKEGDKDTLSKKELKELLETELP--------NFL----------KNQK-------------DPEAVDKIMK 58 (88)
T ss_pred HHHHHHHHhhccCCCCcCcHHHHHHHHHHHhh--------hhc----------cCCC-------------CHHHHHHHHH
Confidence 6778999999 89999999999998875332 000 0000 1367888999
Q ss_pred hcCCCCCCCcccHHHHHhhh
Q 020151 248 MMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 248 ~~d~d~~~G~isk~eLr~~l 267 (330)
.+|.++ +|.|+-+++..++
T Consensus 59 ~~d~~~-~g~I~f~eF~~~~ 77 (88)
T cd00213 59 DLDVNK-DGKVDFQEFLVLI 77 (88)
T ss_pred HhccCC-CCcCcHHHHHHHH
Confidence 999998 9999999987765
No 77
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=95.96 E-value=0.013 Score=46.69 Aligned_cols=70 Identities=7% Similarity=0.057 Sum_probs=51.1
Q ss_pred hHhhhhcccc-CC--CCCCccccHHHHHHHHHccccccccCCCCC----hhHHHHHHhhhcCCCCcccccccccCHHHHH
Q 020151 13 QLRSLSQPLA-LP--TSDSSTVTGAQLLDFAENEASSSLFGLSLP----QNLKSTALKHISGSDDDVTFRIKEFDRDHAS 85 (330)
Q Consensus 13 ~ir~l~~~F~-LD--d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp----~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~ 85 (330)
.|..++..|. .+ ++++|.||.+||+.+... .+|-.++ +..++.+|+.++.+ ++|.|+-++|.
T Consensus 6 ~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~-----~~g~~~t~~~~~~~v~~i~~~~D~d------~dG~I~f~eF~ 74 (88)
T cd05030 6 AIETIINVFHQYSVRKGHPDTLYKKEFKQLVEK-----ELPNFLKKEKNQKAIDKIFEDLDTN------QDGQLSFEEFL 74 (88)
T ss_pred HHHHHHHHHHHHhccCCCcccCCHHHHHHHHHH-----HhhHhhccCCCHHHHHHHHHHcCCC------CCCcCcHHHHH
Confidence 3455666677 66 334599999999994431 1111233 78899999999998 89999999999
Q ss_pred HHHHHHHH
Q 020151 86 KLASDYIT 93 (330)
Q Consensus 86 ~~lk~~l~ 93 (330)
..+..++.
T Consensus 75 ~~~~~~~~ 82 (88)
T cd05030 75 VLVIKVGV 82 (88)
T ss_pred HHHHHHHH
Confidence 88887643
No 78
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.78 E-value=0.017 Score=50.06 Aligned_cols=64 Identities=19% Similarity=0.309 Sum_probs=49.8
Q ss_pred HHHhhcCCCCCCcccHHHHHHHHhhccc--cCCC-C-CCCC-hH---HHHHHHhhhccCCCcccCHHHHHHH
Q 020151 130 NLFADLDTEDEGKVCKGEIQNALGHMGV--EFGV-P-PFSE-FP---QLNDILKKHGAEGEEELGQAQFTEL 193 (330)
Q Consensus 130 ~~F~~LD~d~DG~LS~~ELr~AL~~lgv--~~Gl-P-P~~~-~~---v~d~If~e~D~D~DG~Vs~eEF~~l 193 (330)
.-|+..|-|+||+|.-=||.+|+-..-. +.|- | |-++ .+ .++.|++.-|-|+||.|++.||.+-
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 4688889999999999999999887544 3343 3 3332 22 3888899999999999999999864
No 79
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=95.65 E-value=0.035 Score=57.23 Aligned_cols=189 Identities=17% Similarity=0.260 Sum_probs=107.7
Q ss_pred cccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHH
Q 020151 19 QPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIA 96 (330)
Q Consensus 19 ~~F~-LD-d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiA 96 (330)
..|. ++ |.+ |.+|...+-++..-++. +.....+++++-..+. +.+.+.++.|...|++.+---.
T Consensus 143 ~~f~k~~~d~~-g~it~~~Fi~~~~~~~~-------l~~t~~~~~v~~l~~~------~~~yl~q~df~~~Lqeli~Thp 208 (493)
T KOG2562|consen 143 STFRKIDGDDT-GHITRDKFINYWMRGLM-------LTHTRLEQFVNLLIQA------GCSYLRQDDFKPYLQELIATHP 208 (493)
T ss_pred hhhhhhccCcC-CceeHHHHHHHHHhhhh-------HHHHHHHHHHHHHhcc------CccceeccccHHHHHHHHhcCC
Confidence 4567 77 888 99999999995544444 4455677777777777 7899999999887776654333
Q ss_pred -HHhCCCC--------eEEE----Ee----Cc----------hhHHHhh--cCchhHHH-----------HHHHHHhhcC
Q 020151 97 -DELKDDP--------LVVC----VL----DG----------NMLKLFL--GNEDDFTM-----------LAENLFADLD 136 (330)
Q Consensus 97 -d~L~~~P--------I~v~----v~----DG----------S~L~~~v--ede~~F~~-----------~v~~~F~~LD 136 (330)
.-|+..| ++|- .+ .| +.|..+. ..|..-++ .+-..|-+||
T Consensus 209 l~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD 288 (493)
T KOG2562|consen 209 LEFLDEEPEFQERYAETVIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELD 288 (493)
T ss_pred chhhccChhHHHHHHHHHhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhc
Confidence 1111111 0111 00 12 1111111 11111111 2223366677
Q ss_pred CCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhh----hccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEE
Q 020151 137 TEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKK----HGAEGEEELGQAQFTELLRQVLQDIVDALADKHIII 212 (330)
Q Consensus 137 ~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e----~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~v 212 (330)
+|+||.|++++|..- |-+.+ ..-.++.||+. +-.-.+|.+|+++|.-.+-. .
T Consensus 289 ~Dhd~lidk~~L~ry----~d~tl-----t~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA------~--------- 344 (493)
T KOG2562|consen 289 TDHDGLIDKEDLKRY----GDHTL-----TERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILA------E--------- 344 (493)
T ss_pred cccccccCHHHHHHH----hccch-----hhHHHHHHHhhccccceeeecCcccHHHHHHHHHH------h---------
Confidence 777777777666532 21110 11236666762 23345666777777655321 1
Q ss_pred eccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhh
Q 020151 213 IPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 213 a~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l 267 (330)
.+| .-.+.+.=.||-+|-+. +|-|+..|||-|.
T Consensus 345 -------------------e~k--~t~~SleYwFrclDld~-~G~Lt~~el~~fy 377 (493)
T KOG2562|consen 345 -------------------EDK--DTPASLEYWFRCLDLDG-DGILTLNELRYFY 377 (493)
T ss_pred -------------------ccC--CCccchhhheeeeeccC-CCcccHHHHHHHH
Confidence 111 11244555899999998 9999999999998
No 80
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=95.63 E-value=0.032 Score=41.39 Aligned_cols=50 Identities=16% Similarity=0.309 Sum_probs=39.6
Q ss_pred cccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHH
Q 020151 142 KVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 197 (330)
Q Consensus 142 ~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkI 197 (330)
++|-.|++..|..+.+++ +......+|++.|..++|.++.+||.+.++..
T Consensus 1 kmsf~Evk~lLk~~NI~~------~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEM------DDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp EBEHHHHHHHHHHTT----------HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCc------CHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 468899999999999875 35567889999999999999999999988753
No 81
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=95.41 E-value=0.043 Score=45.83 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=59.6
Q ss_pred hHhhhhcccc-CCCCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHH
Q 020151 13 QLRSLSQPLA-LPTSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASD 90 (330)
Q Consensus 13 ~ir~l~~~F~-LDd~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~ 90 (330)
+...+.+.|. ++..+ |.||+.+.++ +..++ ||...+..|.+-.|.+ ++|.++++||.-.|+-
T Consensus 8 e~~~y~~~F~~l~~~~-g~isg~~a~~~f~~S~---------L~~~~L~~IW~LaD~~------~dG~L~~~EF~iAm~L 71 (104)
T PF12763_consen 8 EKQKYDQIFQSLDPQD-GKISGDQAREFFMKSG---------LPRDVLAQIWNLADID------NDGKLDFEEFAIAMHL 71 (104)
T ss_dssp HHHHHHHHHHCTSSST-TEEEHHHHHHHHHHTT---------SSHHHHHHHHHHH-SS------SSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCC-CeEeHHHHHHHHHHcC---------CCHHHHHHHHhhhcCC------CCCcCCHHHHHHHHHH
Confidence 4556667899 98777 9999999999 87665 7899999999998888 8999999999999998
Q ss_pred HHHHHHHHhCCCC
Q 020151 91 YITAIADELKDDP 103 (330)
Q Consensus 91 ~l~aiAd~L~~~P 103 (330)
+-..++..+..-|
T Consensus 72 i~~~~~~~~~~lP 84 (104)
T PF12763_consen 72 INRKLNGNGKPLP 84 (104)
T ss_dssp HHHHHHHTTS---
T ss_pred HHHHhcCCCCCCc
Confidence 8776665444433
No 82
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=94.82 E-value=0.14 Score=53.62 Aligned_cols=141 Identities=21% Similarity=0.277 Sum_probs=97.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccc
Q 020151 78 EFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGV 157 (330)
Q Consensus 78 ~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv 157 (330)
-++.++|..+....+..|||.-|+.-| ...+=..+..++=-++ ..-..+|.-+|+.++|.+|.++....+.+...
T Consensus 65 L~~e~~~n~~~v~Lla~iaD~tKDgli--sf~eF~afe~~lC~pD---al~~~aFqlFDr~~~~~vs~~~~~~if~~t~l 139 (694)
T KOG0751|consen 65 LYNESNFNDKIVRLLASIADQTKDGLI--SFQEFRAFESVLCAPD---ALFEVAFQLFDRLGNGEVSFEDVADIFGQTNL 139 (694)
T ss_pred hcccccCChHHHHHHHhhhhhcccccc--cHHHHHHHHhhccCch---HHHHHHHHHhcccCCCceehHHHHHHHhcccc
Confidence 345556667778888899987776311 0001011111111221 23467899999999999999999999999999
Q ss_pred cCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHH
Q 020151 158 EFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKA 237 (330)
Q Consensus 158 ~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~ 237 (330)
++-+|-.-+++-+... |..+...-+++.||.+++.+.-+
T Consensus 140 ~~~~~f~~d~efI~~~---Fg~~~~r~~ny~~f~Q~lh~~~~-------------------------------------- 178 (694)
T KOG0751|consen 140 HHHIPFNWDSEFIKLH---FGDIRKRHLNYAEFTQFLHEFQL-------------------------------------- 178 (694)
T ss_pred ccCCCccCCcchHHHH---hhhHHHHhccHHHHHHHHHHHHH--------------------------------------
Confidence 8888877765544443 34455566899999998887664
Q ss_pred hHHHHHHHHHhcCCCCCCCcccHHHHHhhh
Q 020151 238 QLQCREQLFRMMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 238 ~~~~l~~~F~~~d~d~~~G~isk~eLr~~l 267 (330)
.-..++|+..|+.+ +|.||.=++++.+
T Consensus 179 --E~~~qafr~~d~~~-ng~is~Ldfq~im 205 (694)
T KOG0751|consen 179 --EHAEQAFREKDKAK-NGFISVLDFQDIM 205 (694)
T ss_pred --HHHHHHHHHhcccC-CCeeeeechHhhh
Confidence 33567999999999 9999887776655
No 83
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=94.79 E-value=0.045 Score=57.30 Aligned_cols=71 Identities=17% Similarity=0.321 Sum_probs=56.9
Q ss_pred HHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHH
Q 020151 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDI 201 (330)
Q Consensus 127 ~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~ 201 (330)
.+.+.|..+| |++|+++..+|.+++.+.+.-.| .-..+.+.+++...+.|.+|.|+.+||...+..+.-.-
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g---~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~s~~ 90 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLG---YFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLKSKD 90 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhccccc---chhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhhhhh
Confidence 4788899999 88999999999999999755221 11123477889999999999999999999887766543
No 84
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=94.59 E-value=0.12 Score=42.44 Aligned_cols=74 Identities=11% Similarity=0.117 Sum_probs=52.5
Q ss_pred Hhhhhcccc-CCCCCCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHH
Q 020151 14 LRSLSQPLA-LPTSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYI 92 (330)
Q Consensus 14 ir~l~~~F~-LDd~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l 92 (330)
|..++..|. .- +++++||+.||+.|....... .++-..-+..++.+|+.+|.+ ++|+|+-.||...+-.+.
T Consensus 7 i~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~-~l~~~~d~~~vd~im~~LD~n------~Dg~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 7 MEKMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSE-FLKNQNDPMAVDKIMKDLDDC------RDGKVGFQSFFSLIAGLL 78 (91)
T ss_pred HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHH-HHcCCCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHHHH
Confidence 444555566 54 445899999999976554331 111122267899999999999 899999999998887775
Q ss_pred HHH
Q 020151 93 TAI 95 (330)
Q Consensus 93 ~ai 95 (330)
.+-
T Consensus 79 ~ac 81 (91)
T cd05024 79 IAC 81 (91)
T ss_pred HHH
Confidence 543
No 85
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.44 E-value=0.047 Score=31.83 Aligned_cols=27 Identities=19% Similarity=0.539 Sum_probs=24.2
Q ss_pred HHHHHhhhccCCCcccCHHHHHHHHHH
Q 020151 170 LNDILKKHGAEGEEELGQAQFTELLRQ 196 (330)
Q Consensus 170 ~d~If~e~D~D~DG~Vs~eEF~~lmkk 196 (330)
+..+|+.+|.+++|.|+..+|...++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 467899999999999999999998875
No 86
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=93.83 E-value=0.087 Score=30.64 Aligned_cols=27 Identities=22% Similarity=0.362 Sum_probs=24.0
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHhh
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNALGH 154 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~AL~~ 154 (330)
+..+|+.+|.+++|.|+..+++.++..
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 567899999999999999999988765
No 87
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=93.61 E-value=0.14 Score=51.21 Aligned_cols=106 Identities=16% Similarity=0.171 Sum_probs=76.6
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHh
Q 020151 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDAL 205 (330)
Q Consensus 126 ~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L 205 (330)
..+...|.-||.+++|.+. +|..+..+++-.|-|.. ...++--|+.|+.+.||.+..++|--.++-.+. +
T Consensus 259 d~l~~~f~LFde~~tg~~D---~re~v~~lavlc~p~~t--~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lg-----v 328 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGD---YRETVKTLAVLCGPPVT--PVIIQYAFKRFSVAEDGISGEHILSLILQVVLG-----V 328 (412)
T ss_pred hhhhhhhheecCCCCCccc---HHHHhhhheeeeCCCCc--HHHHHHHHHhcccccccccchHHHHHHHHHhcC-----c
Confidence 3478889999999999884 55566666664443322 335666799999999999999988776665442 2
Q ss_pred ccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhcccccee
Q 020151 206 ADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRRFYI 274 (330)
Q Consensus 206 ~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~~~~ 274 (330)
|++ .+-..|+.+++.. +|||+.+++|.|.++...++
T Consensus 329 ---~~l-----------------------------~v~~lf~~i~q~d-~~ki~~~~f~~fa~~~p~~a 364 (412)
T KOG4666|consen 329 ---EVL-----------------------------RVPVLFPSIEQKD-DPKIYASNFRKFAATEPNLA 364 (412)
T ss_pred ---cee-----------------------------eccccchhhhccc-CcceeHHHHHHHHHhCchhh
Confidence 111 1122688888887 89999999999998776654
No 88
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=92.94 E-value=0.79 Score=41.92 Aligned_cols=110 Identities=14% Similarity=0.224 Sum_probs=78.3
Q ss_pred HHHHHHhhcCCCCCCcccHHHHHHHHhhccc------------cCCCC-CCC-----------------------Ch---
Q 020151 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGV------------EFGVP-PFS-----------------------EF--- 167 (330)
Q Consensus 127 ~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv------------~~GlP-P~~-----------------------~~--- 167 (330)
.+.+--..+|.|+||.|..-|.=..+..+|. +.++. |.. ++
T Consensus 8 ~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~Y 87 (174)
T PF05042_consen 8 VLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGAY 87 (174)
T ss_pred HHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCcccc
Confidence 4566677899999999999999888888763 12221 111 11
Q ss_pred --------HHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhH
Q 020151 168 --------PQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQL 239 (330)
Q Consensus 168 --------~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~ 239 (330)
...++||+.++..+.+.++..|...+++. ++.-..|+ + ++.. .
T Consensus 88 D~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~------nr~~~D~~------------G------W~a~-----~ 138 (174)
T PF05042_consen 88 DTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKG------NRNANDPF------------G------WFAA-----F 138 (174)
T ss_pred ccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHh------ccccCCcc------------h------hhhh-----h
Confidence 12788999999888889999999887763 33344444 1 3333 3
Q ss_pred HHHHHHHHhcCCCCCCCcccHHHHHhhh
Q 020151 240 QCREQLFRMMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 240 ~~l~~~F~~~d~d~~~G~isk~eLr~~l 267 (330)
.+|..+|..+ +|+ +|+++|+.+|.+.
T Consensus 139 ~EW~~~y~L~-~d~-dG~l~Ke~iR~vY 164 (174)
T PF05042_consen 139 FEWGALYILA-KDK-DGFLSKEDIRGVY 164 (174)
T ss_pred hHHHHHHHHH-cCc-CCcEeHHHHhhhc
Confidence 8899999887 444 6999999999876
No 89
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=92.55 E-value=0.41 Score=55.63 Aligned_cols=138 Identities=14% Similarity=0.161 Sum_probs=93.5
Q ss_pred hhHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHH
Q 020151 12 TQLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (330)
Q Consensus 12 s~ir~l~~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~l 88 (330)
.++++|--.|. .| +.. |.|++.++.- |-.+|..------|-|++-+..+|.-.|.+ +.|-|+ +
T Consensus 2250 e~L~EFs~~fkhFDkek~-G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~------r~G~Vs-------l 2315 (2399)
T KOG0040|consen 2250 EQLKEFSMMFKHFDKEKN-GRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPN------RDGYVS-------L 2315 (2399)
T ss_pred HHHHHHHHHHHHhchhhc-cCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCC------CcCccc-------H
Confidence 46777777899 99 888 9999999999 887776600000134467889999999999 899999 7
Q ss_pred HHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChH
Q 020151 89 SDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFP 168 (330)
Q Consensus 89 k~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~ 168 (330)
++|+.+|-..=.. ....++. ++.+|+.+|. +..++++.++.. .|||..+.-
T Consensus 2316 ~dY~afmi~~ETe--------------NI~s~~e-----IE~AfraL~a-~~~yvtke~~~~---------~ltreqaef 2366 (2399)
T KOG0040|consen 2316 QDYMAFMISKETE--------------NILSSEE-----IEDAFRALDA-GKPYVTKEELYQ---------NLTREQAEF 2366 (2399)
T ss_pred HHHHHHHHhcccc--------------cccchHH-----HHHHHHHhhc-CCccccHHHHHh---------cCCHHHHHH
Confidence 7788888654322 3445555 9999999999 567899988864 344444332
Q ss_pred HHHHHHhhhcc----CCCcccCHHHHHH
Q 020151 169 QLNDILKKHGA----EGEEELGQAQFTE 192 (330)
Q Consensus 169 v~d~If~e~D~----D~DG~Vs~eEF~~ 192 (330)
-+..|=.-.++ -...++++..|..
T Consensus 2367 c~s~m~~~~e~~~~~s~q~~l~y~dfv~ 2394 (2399)
T KOG0040|consen 2367 CMSKMKPYAETSSGRSDQVALDYKDFVN 2394 (2399)
T ss_pred HHHHhhhhcccccCCCccccccHHHHHH
Confidence 33443332232 2334456666654
No 90
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=92.42 E-value=0.36 Score=52.49 Aligned_cols=118 Identities=15% Similarity=0.246 Sum_probs=90.3
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHH
Q 020151 124 FTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVD 203 (330)
Q Consensus 124 F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~ 203 (330)
-...+..+|.+.|++++|.++..+...++..+.+.++ ......+|++.+.-.++.+..++|.++......
T Consensus 134 ~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~------~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~---- 203 (746)
T KOG0169|consen 134 REHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLS------ESKARRLFKESDNSQTGKLEEEEFVKFRKELTK---- 203 (746)
T ss_pred HHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhh------HHHHHHHHHHHHhhccceehHHHHHHHHHhhcc----
Confidence 3467889999999999999999999999999877541 334677899999989999999999887665432
Q ss_pred HhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhccccceeccCCchhhh
Q 020151 204 ALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRRFYIEEGGRREIV 283 (330)
Q Consensus 204 ~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~~~~~~~~~~~~~ 283 (330)
.++...+|..+-.++ +.+|..+|..||... + |
T Consensus 204 -----------------------------------rpev~~~f~~~s~~~--~~ls~~~L~~Fl~~~-----q-~----- 235 (746)
T KOG0169|consen 204 -----------------------------------RPEVYFLFVQYSHGK--EYLSTDDLLRFLEEE-----Q-G----- 235 (746)
T ss_pred -----------------------------------CchHHHHHHHHhCCC--CccCHHHHHHHHHHh-----c-c-----
Confidence 145666888877664 899999999999554 1 1
Q ss_pred hhhhhhchhhhhhhcccc
Q 020151 284 GMMSAIGLSECQTIGRDL 301 (330)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~ 301 (330)
+-.+|+.+|+.|=+.+
T Consensus 236 --e~~~~~~~ae~ii~~~ 251 (746)
T KOG0169|consen 236 --EDGATLDEAEEIIERY 251 (746)
T ss_pred --cccccHHHHHHHHHHh
Confidence 2345777777776544
No 91
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.34 E-value=1.3 Score=48.72 Aligned_cols=153 Identities=21% Similarity=0.279 Sum_probs=109.8
Q ss_pred cccc-CCCCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHH
Q 020151 19 QPLA-LPTSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIA 96 (330)
Q Consensus 19 ~~F~-LDd~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiA 96 (330)
..|. |--.. |.+|+.+-++ +..++ ||+.++.+|-.--|.| .+|..|+-||+=.||-|.+-++
T Consensus 20 ~qF~~Lkp~~-gfitg~qArnfflqS~---------LP~~VLaqIWALsDld------kDGrmdi~EfSIAmkLi~lkLq 83 (1118)
T KOG1029|consen 20 AQFGQLKPGQ-GFITGDQARNFFLQSG---------LPTPVLAQIWALSDLD------KDGRMDIREFSIAMKLIKLKLQ 83 (1118)
T ss_pred HHHhccCCCC-CccchHhhhhhHHhcC---------CChHHHHHHHHhhhcC------ccccchHHHHHHHHHHHHHHhc
Confidence 4566 76666 9999999999 77766 8899999998887888 8999999999999998887665
Q ss_pred H----------HhCCC--------------------------------------CeEEE---------EeCc-------h
Q 020151 97 D----------ELKDD--------------------------------------PLVVC---------VLDG-------N 112 (330)
Q Consensus 97 d----------~L~~~--------------------------------------PI~v~---------v~DG-------S 112 (330)
- -|+.. ||.|+ +-+| |
T Consensus 84 G~~lP~~LPPsll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~s 163 (1118)
T KOG1029|consen 84 GIQLPPVLPPSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNS 163 (1118)
T ss_pred CCcCCCCCChHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCC
Confidence 2 12211 33333 2356 3
Q ss_pred hHHHh----hcCc--------------hhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHH
Q 020151 113 MLKLF----LGNE--------------DDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDIL 174 (330)
Q Consensus 113 ~L~~~----vede--------------~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If 174 (330)
.|..= ..-+ +.=.--...+|..+|+..+|+||-..-|.+|.+- |+|-. ++-.|.
T Consensus 164 pl~~~ss~se~~~~~~s~~q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS----~Lpq~----~LA~IW 235 (1118)
T KOG1029|consen 164 PLPHDSSVSEGRPSIESVNQLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQS----GLPQN----QLAHIW 235 (1118)
T ss_pred CCCCCcchhhcCccchhhhhhhhccccchhhhHHHHHhhhcccccccccccHHHHHHHHhc----CCchh----hHhhhe
Confidence 33210 0001 0000113567999999999999999999999884 44433 367788
Q ss_pred hhhccCCCcccCHHHHHHHHH
Q 020151 175 KKHGAEGEEELGQAQFTELLR 195 (330)
Q Consensus 175 ~e~D~D~DG~Vs~eEF~~lmk 195 (330)
..-|.|+||.++-+||.=.|.
T Consensus 236 ~LsDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 236 TLSDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred eeeccCCCCcccHHHHHHHHH
Confidence 888999999999999976555
No 92
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=90.94 E-value=1.7 Score=45.75 Aligned_cols=114 Identities=17% Similarity=0.246 Sum_probs=83.6
Q ss_pred CC-CCCCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCC
Q 020151 23 LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKD 101 (330)
Q Consensus 23 LD-d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~ 101 (330)
-| ..| |.||..|++.+...-.. |+.+|.-+|.-||.. ++++|+-+.|.+.+++-..
T Consensus 83 aD~tKD-glisf~eF~afe~~lC~--------pDal~~~aFqlFDr~------~~~~vs~~~~~~if~~t~l-------- 139 (694)
T KOG0751|consen 83 ADQTKD-GLISFQEFRAFESVLCA--------PDALFEVAFQLFDRL------GNGEVSFEDVADIFGQTNL-------- 139 (694)
T ss_pred hhhccc-ccccHHHHHHHHhhccC--------chHHHHHHHHHhccc------CCCceehHHHHHHHhcccc--------
Confidence 45 778 99999999997766666 899999999999999 7999998888887765321
Q ss_pred CCeEEEEeCchhHHHhhcCch-------hHHHH--------HHHHHhhcCCCCCCcccHHHHHHHHhhccccC
Q 020151 102 DPLVVCVLDGNMLKLFLGNED-------DFTML--------AENLFADLDTEDEGKVCKGEIQNALGHMGVEF 159 (330)
Q Consensus 102 ~PI~v~v~DGS~L~~~vede~-------~F~~~--------v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~ 159 (330)
..=+-.-.|+..|+....+.+ .|..+ ..+.|++-|+.++|.+|.=..+..+-.+..++
T Consensus 140 ~~~~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~E~~~qafr~~d~~~ng~is~Ldfq~imvt~~~h~ 212 (694)
T KOG0751|consen 140 HHHIPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQLEHAEQAFREKDKAKNGFISVLDFQDIMVTIRIHL 212 (694)
T ss_pred ccCCCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcccCCCeeeeechHhhhhhhhhhc
Confidence 111112347777766555443 23332 45679999999999999888888777766553
No 93
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=90.10 E-value=0.4 Score=46.51 Aligned_cols=71 Identities=10% Similarity=0.140 Sum_probs=50.5
Q ss_pred hHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHH
Q 020151 123 DFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQ 196 (330)
Q Consensus 123 ~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkk 196 (330)
.....+..+|+..|.|.||+||-.|++.-......++= . .+-+.-.--|.-+|.|+||.|+-+||+--+.+
T Consensus 98 rsrrklmviFsKvDVNtDrkisAkEmqrwImektaEHf-q--eameeSkthFraVDpdgDGhvsWdEykvkFla 168 (362)
T KOG4251|consen 98 RSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHF-Q--EAMEESKTHFRAVDPDGDGHVSWDEYKVKFLA 168 (362)
T ss_pred HHHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHH-H--HHHhhhhhheeeeCCCCCCceehhhhhhHHHh
Confidence 45566888999999999999999999887766544320 0 00000122477889999999999999876543
No 94
>PF14658 EF-hand_9: EF-hand domain
Probab=89.78 E-value=1 Score=35.07 Aligned_cols=60 Identities=10% Similarity=0.133 Sum_probs=48.5
Q ss_pred ccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHH
Q 020151 20 PLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDY 91 (330)
Q Consensus 20 ~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~ 91 (330)
.|. .| ++. |++...+|.. |-..+.. +.++.-++.+-+.+|.++ ++++|+.+.|...||+-
T Consensus 3 ~F~~fD~~~t-G~V~v~~l~~~Lra~~~~------~p~e~~Lq~l~~elDP~g-----~~~~v~~d~F~~iM~~w 65 (66)
T PF14658_consen 3 AFDAFDTQKT-GRVPVSDLITYLRAVTGR------SPEESELQDLINELDPEG-----RDGSVNFDTFLAIMRDW 65 (66)
T ss_pred chhhcCCcCC-ceEeHHHHHHHHHHHcCC------CCcHHHHHHHHHHhCCCC-----CCceEeHHHHHHHHHHh
Confidence 477 78 777 9999999999 7666652 145788999999999982 34999999999999863
No 95
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=89.06 E-value=0.54 Score=44.36 Aligned_cols=72 Identities=14% Similarity=0.145 Sum_probs=54.5
Q ss_pred hHhhhhcccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHH
Q 020151 13 QLRSLSQPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLAS 89 (330)
Q Consensus 13 ~ir~l~~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk 89 (330)
+|..+-..|+ +| +.| |.|+.-||.- +-.+|+.+||.| .-.++.+.+.| .+|.++.-+|.=.++
T Consensus 97 qIk~~~~~Fk~yDe~rD-gfIdl~ELK~mmEKLgapQTHL~-------lK~mikeVded------~dgklSfreflLIfr 162 (244)
T KOG0041|consen 97 QIKDAESMFKQYDEDRD-GFIDLMELKRMMEKLGAPQTHLG-------LKNMIKEVDED------FDGKLSFREFLLIFR 162 (244)
T ss_pred HHHHHHHHHHHhccccc-ccccHHHHHHHHHHhCCchhhHH-------HHHHHHHhhcc------cccchhHHHHHHHHH
Confidence 3444557899 99 999 9999999999 888898887777 45678888888 899999777765554
Q ss_pred HHHHHHHHHhCC
Q 020151 90 DYITAIADELKD 101 (330)
Q Consensus 90 ~~l~aiAd~L~~ 101 (330)
. +.|-+|..
T Consensus 163 k---aaagEL~~ 171 (244)
T KOG0041|consen 163 K---AAAGELQE 171 (244)
T ss_pred H---Hhcccccc
Confidence 4 44545544
No 96
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=88.37 E-value=0.11 Score=43.83 Aligned_cols=52 Identities=10% Similarity=0.098 Sum_probs=37.3
Q ss_pred cccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHH
Q 020151 19 QPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHAS 85 (330)
Q Consensus 19 ~~F~-LD-d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~ 85 (330)
=.|. || |+| |.|+..||.++-..- ..|.+=....++.+|.+ +++.||..|..
T Consensus 58 W~F~~LD~n~d-~~L~~~El~~l~~~l--------~~~e~C~~~F~~~CD~n------~d~~Is~~EW~ 111 (113)
T PF10591_consen 58 WKFCQLDRNKD-GVLDRSELKPLRRPL--------MPPEHCARPFFRSCDVN------KDGKISLDEWC 111 (113)
T ss_dssp HHHHHH--T-S-SEE-TTTTGGGGSTT--------STTGGGHHHHHHHH-TT-------SSSEEHHHHH
T ss_pred hhHhhhcCCCC-CccCHHHHHHHHHHH--------hhhHHHHHHHHHHcCCC------CCCCCCHHHHc
Confidence 5689 99 999 999999999954311 24567788899999999 89999988764
No 97
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=85.38 E-value=1.8 Score=46.28 Aligned_cols=140 Identities=16% Similarity=0.218 Sum_probs=81.5
Q ss_pred hhHhhhhcccc-CC-CCCCccccHHHHHHHHHccccccccCCCCChh----HHHHHHhhhcCCCCcccccccccCHHHHH
Q 020151 12 TQLRSLSQPLA-LP-TSDSSTVTGAQLLDFAENEASSSLFGLSLPQN----LKSTALKHISGSDDDVTFRIKEFDRDHAS 85 (330)
Q Consensus 12 s~ir~l~~~F~-LD-d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~----l~~~~l~~~~~~~~~~~~~~~~vd~eeF~ 85 (330)
..++.|...|. -| |+| |.||.+||..++.. -||-++-+. ++..+-+.+..+ +..+.-.++- |+
T Consensus 192 ~~v~al~RIFki~D~d~D-~~Lsd~Eln~fQ~~-----CF~~pl~p~~l~~vk~vv~e~~p~g---v~~~~ltl~G--FL 260 (625)
T KOG1707|consen 192 RCVKALKRIFKISDSDND-GALSDAELNDFQKK-----CFNTPLDPQELEDVKNVVQEICPDG---VYERGLTLPG--FL 260 (625)
T ss_pred HHHHHHHHHHhhhccccc-cccchhhhhHHHHH-----hcCCCCCHHHHHHHHHHHHhhcCch---hhhccccccc--hH
Confidence 34566668889 77 999 99999999997743 344555543 333333333322 3323333331 21
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCC
Q 020151 86 KLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFS 165 (330)
Q Consensus 86 ~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~ 165 (330)
-.- .++|-.| ..| ..+.+-+.+.-+++=.|+-+.|. ..+-.||.+
T Consensus 261 fL~---~lfierg--------------------r~E-----ttW~iLR~fgY~DsleL~~~~l~-------p~~~~~p~~ 305 (625)
T KOG1707|consen 261 FLN---TLFIERG--------------------RHE-----TTWTILRKFGYTDSLELTDEYLP-------PRLKVPPDQ 305 (625)
T ss_pred HHH---HHHHHhc--------------------ccc-----chhhhhhhcCCcchhhhhhhhcC-------ccccCCCCc
Confidence 111 1111111 122 25555555655544455444443 334567766
Q ss_pred ChH-------HHHHHHhhhccCCCcccCHHHHHHHHHHH
Q 020151 166 EFP-------QLNDILKKHGAEGEEELGQAQFTELLRQV 197 (330)
Q Consensus 166 ~~~-------v~d~If~e~D~D~DG~Vs~eEF~~lmkkI 197 (330)
..+ -+..+|..||.|+||..+-+||..+++.-
T Consensus 306 s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~ 344 (625)
T KOG1707|consen 306 SVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTA 344 (625)
T ss_pred ceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhC
Confidence 633 27788999999999999999999888753
No 98
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=83.11 E-value=3 Score=32.27 Aligned_cols=63 Identities=21% Similarity=0.323 Sum_probs=47.9
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccC----CCcccCHHHHHHHHH
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAE----GEEELGQAQFTELLR 195 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D----~DG~Vs~eEF~~lmk 195 (330)
+..+|+.+-. +.+.+|.++++.+|..- +|.|.. +...+..|+..+..+ ..+.++.+.|...|.
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~e---Q~~~~~-~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~ 68 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREE---QGEPRL-TDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLF 68 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHT---SS-TTS-SHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHH---hccccC-cHHHHHHHHHHHccchhhcccCCcCHHHHHHHHC
Confidence 6789999955 68999999999998763 454444 355688888887554 468889999988764
No 99
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=82.91 E-value=0.36 Score=48.38 Aligned_cols=103 Identities=10% Similarity=0.064 Sum_probs=68.6
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhc
Q 020151 76 IKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHM 155 (330)
Q Consensus 76 ~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~l 155 (330)
-.+--+.||...|.++|. .-++++..++|.=+..-.|| +.++.=.|.+||+|+++.|.+.|++++=.=+
T Consensus 294 C~e~KKteFL~~Ll~aL~--------Tdmv~s~~~as~gr~~e~De---eRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l 362 (421)
T KOG4578|consen 294 CPEKKKTEFLTSLLDALK--------TDMVMSGINASNGRKSEPDE---ERVVHWYFNQLDKNSNNDIERREWKPFKRVL 362 (421)
T ss_pred CCcchhhHHHHHHHHHHh--------hhhhhhcccccCCcccCCCh---hheeeeeeeeecccccCccchhhcchHHHHH
Confidence 335567888888877764 23555666666333333342 1245556999999999999999999753333
Q ss_pred cccCCCCCCCChH-HHHHHHhhhccCCCcccCHHHHHHHHH
Q 020151 156 GVEFGVPPFSEFP-QLNDILKKHGAEGEEELGQAQFTELLR 195 (330)
Q Consensus 156 gv~~GlPP~~~~~-v~d~If~e~D~D~DG~Vs~eEF~~lmk 195 (330)
... . ... --.++|+-.|-|+|.+||..|.+..+.
T Consensus 363 ~k~-s-----~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~ 397 (421)
T KOG4578|consen 363 LKK-S-----KPRKCSRKFFKYCDLNKDKKISLDEWRGCLG 397 (421)
T ss_pred Hhh-c-----cHHHHhhhcchhcccCCCceecHHHHhhhhc
Confidence 221 0 011 146678888999999999999977654
No 100
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=82.78 E-value=1.3 Score=44.80 Aligned_cols=59 Identities=8% Similarity=0.109 Sum_probs=47.5
Q ss_pred HHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChH-HHHHHHhhhccCCCcccCHHHHHHHHHH
Q 020151 127 LAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFP-QLNDILKKHGAEGEEELGQAQFTELLRQ 196 (330)
Q Consensus 127 ~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~-v~d~If~e~D~D~DG~Vs~eEF~~lmkk 196 (330)
.+-=.|..+|.|.||.|+.+||+. +..-. .+ -+..+|..-|...||.||-.|.+-.+.+
T Consensus 251 s~gWMFnklD~N~Dl~Ld~sEl~~-I~ldk----------nE~CikpFfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 251 SLGWMFNKLDTNYDLLLDQSELRA-IELDK----------NEACIKPFFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred hhhhhhhccccccccccCHHHhhh-hhccC----------chhHHHHHHhhhcccccCccccchhhhhhcc
Confidence 355579999999999999999994 43311 22 3788899999999999999999887764
No 101
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=82.14 E-value=2.3 Score=44.99 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=56.8
Q ss_pred hhHhhhhcccc-CCCCCCccccHHHHHH-HHHccccccccCCCCC-hhHHHHHHhhhcCCCCcccccccccCHHHHHHHH
Q 020151 12 TQLRSLSQPLA-LPTSDSSTVTGAQLLD-FAENEASSSLFGLSLP-QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLA 88 (330)
Q Consensus 12 s~ir~l~~~F~-LDd~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp-~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~l 88 (330)
.++|++..+|. +||++ |.+|..|+.+ +.+.+.. .+.- ..+...++.....+ .+|.|+.|+|...+
T Consensus 16 ~El~~l~~kF~~~d~~~-G~v~~~~l~~~f~k~~~~-----~g~~~~eei~~~l~~~~~~------~~g~v~fe~f~~~~ 83 (627)
T KOG0046|consen 16 EELRELKEKFNKLDDQK-GYVTVYELPDAFKKAKLP-----LGYFVREEIKEILGEVGVD------ADGRVEFEEFVGIF 83 (627)
T ss_pred HHHHHHHHHHHhhcCCC-CeeehHHhHHHHHHhccc-----ccchhHHHHHHHHhccCCC------cCCccCHHHHHHHH
Confidence 47889999999 99877 9999999999 8877755 1211 45778888888888 79999999999876
Q ss_pred HHHHHH
Q 020151 89 SDYITA 94 (330)
Q Consensus 89 k~~l~a 94 (330)
..+..-
T Consensus 84 ~~l~s~ 89 (627)
T KOG0046|consen 84 LNLKSK 89 (627)
T ss_pred Hhhhhh
Confidence 666554
No 102
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=81.31 E-value=1.4 Score=44.17 Aligned_cols=63 Identities=16% Similarity=0.198 Sum_probs=43.3
Q ss_pred HHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHH-----------HHHHHhhhccCCCcccCHHHHHHH
Q 020151 130 NLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQ-----------LNDILKKHGAEGEEELGQAQFTEL 193 (330)
Q Consensus 130 ~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v-----------~d~If~e~D~D~DG~Vs~eEF~~l 193 (330)
..|.-.|.|+||++.-.||...+.. -.+--..|...... -.-|++++|+|.|..|+.+||..-
T Consensus 248 TFF~LHD~NsDGfldeqELEaLFtk-ELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~ 321 (442)
T KOG3866|consen 248 TFFALHDLNSDGFLDEQELEALFTK-ELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLND 321 (442)
T ss_pred hheeeeccCCcccccHHHHHHHHHH-HHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhh
Confidence 3477889999999999999854433 22212233322111 234799999999999999999653
No 103
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=81.22 E-value=1.8 Score=46.33 Aligned_cols=65 Identities=15% Similarity=0.237 Sum_probs=55.7
Q ss_pred HHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHH
Q 020151 129 ENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 199 (330)
Q Consensus 129 ~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~ 199 (330)
...|..+|.|+.|..+...++.+|+..++.+ +...+++++.+.|.+.+|.+...||.++|..+-.
T Consensus 596 ~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~------d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~ 660 (680)
T KOG0042|consen 596 KTRFAFLDADKKAYQAIADVLKVLKSENVGW------DEDRLHEELQEADENLNGFVELREFLQLMSAIKN 660 (680)
T ss_pred HHHHHhhcchHHHHHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhc
Confidence 3579999999999999999999999987543 2346899999999999999999999999887654
No 104
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=77.73 E-value=4.5 Score=32.35 Aligned_cols=85 Identities=19% Similarity=0.173 Sum_probs=56.5
Q ss_pred CCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEecccccc
Q 020151 140 EGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKII 219 (330)
Q Consensus 140 DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~ 219 (330)
||.+|..|...+-.-+...+|+++.. .+.+++.+....+...+..+|.+.++...
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 67 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAEE----AAELLAEAEALEEEAPDLYEFTSLIKEHF--------------------- 67 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHHH----HHHHHHHHHHHHHhCCCHHHHHHHHHHhC---------------------
Confidence 79999999985444445556776544 56777777666677789999988766422
Q ss_pred CCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhh
Q 020151 220 DGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDF 266 (330)
Q Consensus 220 dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~ 266 (330)
....| ...+..+|+..-.| |.++..|.+-.
T Consensus 68 -~~~~r-------------~~~l~~L~~vA~AD---G~~~~~E~~~l 97 (104)
T cd07313 68 -DYEER-------------LELVEALWEVAYAD---GELDEYEEHLI 97 (104)
T ss_pred -CHHHH-------------HHHHHHHHHHHHhc---CCCCHHHHHHH
Confidence 01111 36666777777775 78888876543
No 105
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=76.34 E-value=7.4 Score=28.97 Aligned_cols=48 Identities=2% Similarity=0.059 Sum_probs=36.1
Q ss_pred cccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHH
Q 020151 30 TVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASD 90 (330)
Q Consensus 30 ~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~ 90 (330)
++|..|++. |..+.+. +.+.-...+|+++|++ .+|.++.+||.+-.+.
T Consensus 1 kmsf~Evk~lLk~~NI~-------~~~~yA~~LFq~~D~s------~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIE-------MDDEYARQLFQECDKS------QSGRLEGEEFEEFYKR 49 (51)
T ss_dssp EBEHHHHHHHHHHTT-----------HHHHHHHHHHH-SS------SSSEBEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccC-------cCHHHHHHHHHHhccc------CCCCccHHHHHHHHHH
Confidence 478899999 7777766 6677778899999999 8999999999876654
No 106
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=75.88 E-value=5.9 Score=39.99 Aligned_cols=104 Identities=10% Similarity=0.159 Sum_probs=72.8
Q ss_pred CC-hhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHH
Q 020151 53 LP-QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENL 131 (330)
Q Consensus 53 lp-~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~ 131 (330)
+| ..+..+.|.-|+.+ +.|.+| ++.+.-++| ++-++.--.-.+.-.
T Consensus 255 vpvsd~l~~~f~LFde~------~tg~~D-------~re~v~~la--------------------vlc~p~~t~~iiq~a 301 (412)
T KOG4666|consen 255 VPVSDKLAPTFMLFDEG------TTGNGD-------YRETVKTLA--------------------VLCGPPVTPVIIQYA 301 (412)
T ss_pred cchhhhhhhhhheecCC------CCCccc-------HHHHhhhhe--------------------eeeCCCCcHHHHHHH
Confidence 44 46888999999999 889999 222222222 233344455567888
Q ss_pred HhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHH
Q 020151 132 FADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQ 196 (330)
Q Consensus 132 F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkk 196 (330)
|+.++.+-||.+.-.+|--.|+. ..|+|.-. +.-+|..++...+++|+.++|++++..
T Consensus 302 fk~f~v~eDg~~ge~~ls~ilq~---~lgv~~l~----v~~lf~~i~q~d~~ki~~~~f~~fa~~ 359 (412)
T KOG4666|consen 302 FKRFSVAEDGISGEHILSLILQV---VLGVEVLR----VPVLFPSIEQKDDPKIYASNFRKFAAT 359 (412)
T ss_pred HHhcccccccccchHHHHHHHHH---hcCcceee----ccccchhhhcccCcceeHHHHHHHHHh
Confidence 99999999999988777655444 23444333 355689999999999999999887653
No 107
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=69.05 E-value=21 Score=34.36 Aligned_cols=101 Identities=17% Similarity=0.157 Sum_probs=61.7
Q ss_pred CCCCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCe
Q 020151 25 TSDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPL 104 (330)
Q Consensus 25 d~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI 104 (330)
--| |.+|.+|+.-+..+-. . +++++.....+.+-|+.+ .....+.++|...++... .
T Consensus 67 kAD-G~Vse~Ei~~~~~l~~---~--~~l~~~~r~~a~~lf~~~------k~~~~~l~~~~~~~~~~~-------~---- 123 (267)
T PRK09430 67 KAK-GRVTEADIRIASQLMD---R--MNLHGEARRAAQQAFREG------KEPDFPLREKLRQFRSVC-------G---- 123 (267)
T ss_pred hcC-CCcCHHHHHHHHHHHH---H--cCCCHHHHHHHHHHHHHh------cccCCCHHHHHHHHHHHh-------c----
Confidence 557 9999999984332221 2 335554433334444444 455577777776666554 1
Q ss_pred EEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCC
Q 020151 105 VVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFS 165 (330)
Q Consensus 105 ~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~ 165 (330)
..+.....+++..|.--=. ||.++..|-. .|.+++.-+|+++..
T Consensus 124 --------------~r~~l~~~lL~~l~~vA~A--DG~l~~~E~~-~L~~Ia~~Lgis~~d 167 (267)
T PRK09430 124 --------------GRFDLLRMFLEIQIQAAFA--DGSLHPNERQ-VLYVIAEELGFSRFQ 167 (267)
T ss_pred --------------ccHHHHHHHHHHHHHHHHh--cCCCCHHHHH-HHHHHHHHcCCCHHH
Confidence 2333344455666655554 4889999966 888888888887755
No 108
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=67.89 E-value=6.7 Score=41.58 Aligned_cols=62 Identities=15% Similarity=0.249 Sum_probs=51.7
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHH
Q 020151 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLR 195 (330)
Q Consensus 126 ~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmk 195 (330)
....+-|+.+-.|-+|.||-+--+++|.+-. +|- +.+.-|.+.-|.|.||.+++.||++.|.
T Consensus 231 eYYvnQFrtvQpDp~gfisGsaAknFFtKSk----lpi----~ELshIWeLsD~d~DGALtL~EFcAAfH 292 (737)
T KOG1955|consen 231 EYYVNQFRTVQPDPHGFISGSAAKNFFTKSK----LPI----EELSHIWELSDVDRDGALTLSEFCAAFH 292 (737)
T ss_pred HHHHhhhhcccCCcccccccHHHHhhhhhcc----Cch----HHHHHHHhhcccCccccccHHHHHhhHh
Confidence 3456779999999999999999999998832 222 2378899999999999999999999876
No 109
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=67.43 E-value=5.1 Score=44.58 Aligned_cols=161 Identities=14% Similarity=0.212 Sum_probs=105.9
Q ss_pred cccc-CCCCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHH
Q 020151 19 QPLA-LPTSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIA 96 (330)
Q Consensus 19 ~~F~-LDd~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiA 96 (330)
+.|. +.-.. |+++++-.++ ++.++ +|..+...+-.-.+.+ .+|.+++.||.-.|+-+...+=
T Consensus 133 q~f~s~~p~~-g~~sg~~~~pil~~s~---------Lp~~~l~~iw~l~d~d------~~g~Ld~~ef~~am~l~~~~l~ 196 (847)
T KOG0998|consen 133 QIFRSLSPSN-GLLSGDKAKPILLNSK---------LPSDVLGRIWELSDID------KDGNLDRDEFAVAMHLINDLLN 196 (847)
T ss_pred HHHhccCCCC-CccccchhhhhhhcCC---------CChhhhcccccccccc------ccCCCChhhhhhhhhHHHHHhh
Confidence 6677 77557 9999999998 66555 4555554444454555 7899999999988887766554
Q ss_pred HHhCCCCeEEE----------Ee-Cc------------------hhHH---------------------------Hh--h
Q 020151 97 DELKDDPLVVC----------VL-DG------------------NMLK---------------------------LF--L 118 (330)
Q Consensus 97 d~L~~~PI~v~----------v~-DG------------------S~L~---------------------------~~--v 118 (330)
.-+.-.|-..- .. .| ..++ .+ +
T Consensus 197 ~~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~ 276 (847)
T KOG0998|consen 197 GNSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQLIVSWSPK 276 (847)
T ss_pred cccCCCCccCCcccCCcchhcccccCcccccccccccccccccccccccccchhcccCCccccccccccccccccccCcc
Confidence 11222221110 00 11 0000 00 1
Q ss_pred cCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHH
Q 020151 119 GNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 198 (330)
Q Consensus 119 ede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL 198 (330)
-.+..-. -...+|.+.|++++|+|+-.+.++.+.. +|++... +..+....|.+..|.+++.||+-.|-.+.
T Consensus 277 vsp~d~~-~~~~if~q~d~~~dG~I~s~~~~~~f~~----~gl~~~~----l~~~w~l~d~~n~~~ls~~ef~~~~~~~~ 347 (847)
T KOG0998|consen 277 VSPSDKQ-KYSKIFSQVDKDNDGSISSNEARNIFLP----FGLSKPR----LAHVWLLADTQNTGTLSKDEFALAMHLLE 347 (847)
T ss_pred cChHHHH-HHHHHHHhccccCCCccccccccccccc----CCCChhh----hhhhhhhcchhccCcccccccchhhhhhh
Confidence 1111111 2334899999999999999999887766 4555544 57788899999999999999999988888
Q ss_pred HHHHHH
Q 020151 199 QDIVDA 204 (330)
Q Consensus 199 ~~~A~~ 204 (330)
...+.+
T Consensus 348 ~~~~~g 353 (847)
T KOG0998|consen 348 QKRAEG 353 (847)
T ss_pred hhhhcC
Confidence 776665
No 110
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=67.20 E-value=55 Score=29.89 Aligned_cols=101 Identities=20% Similarity=0.232 Sum_probs=66.4
Q ss_pred CCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCch------hhH-HHHh---
Q 020151 161 VPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSK------LRM-VSKM--- 230 (330)
Q Consensus 161 lPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~------l~~-~~~~--- 230 (330)
||...+++.-..|.+-|-.||+|-++.+.|..++.=.-+..-+.|+..=-.=+- -|||.+ |.+ |.++
T Consensus 64 MPELkenpfk~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIY---Dfd~D~~i~~~DL~~~l~~lTr~ 140 (189)
T KOG0038|consen 64 MPELKENPFKRRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIY---DFDGDEFIGHDDLEKTLTSLTRD 140 (189)
T ss_pred ChhhhcChHHHHHHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEe---ecCCCCcccHHHHHHHHHHHhhc
Confidence 444444555667778889999999999999999886666555667654332221 133332 211 1112
Q ss_pred -hhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhh
Q 020151 231 -LSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 231 -l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l 267 (330)
||. .+.......+....|-|+ +|++|-.++..++
T Consensus 141 eLs~--eEv~~i~ekvieEAD~Dg-Dgkl~~~eFe~~i 175 (189)
T KOG0038|consen 141 ELSD--EEVELICEKVIEEADLDG-DGKLSFAEFEHVI 175 (189)
T ss_pred cCCH--HHHHHHHHHHHHHhcCCC-CCcccHHHHHHHH
Confidence 222 344455667888899998 9999999998877
No 111
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=65.54 E-value=80 Score=30.92 Aligned_cols=152 Identities=20% Similarity=0.300 Sum_probs=97.8
Q ss_pred HHHHhhcCC---------CCCCcccHHHHHHHHhhccccCCCCCCCChHHH--HHHHhhhccCCCcccCHHHHHHHHHHH
Q 020151 129 ENLFADLDT---------EDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQL--NDILKKHGAEGEEELGQAQFTELLRQV 197 (330)
Q Consensus 129 ~~~F~~LD~---------d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~--d~If~e~D~D~DG~Vs~eEF~~lmkkI 197 (330)
..+|+++|+ -+..+|+-..+.+++++-..=.|+--....++| -+|+..-| -|.+.|..+
T Consensus 112 ~~lF~~l~~~ak~~~il~tNTSSl~lt~ia~~~~~~srf~GlHFfNPvPvMKLvEVir~~~------TS~eTf~~l---- 181 (298)
T KOG2304|consen 112 RKLFKDLDKIAKSSTILATNTSSLSLTDIASATQRPSRFAGLHFFNPVPVMKLVEVIRTDD------TSDETFNAL---- 181 (298)
T ss_pred HHHHHHHHhhcccceEEeecccceeHHHHHhhccChhhhceeeccCCchhHHHhhhhcCCC------CCHHHHHHH----
Confidence 456888873 225578888899988885544455443333432 23333322 378999775
Q ss_pred HHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhccccceeccC
Q 020151 198 LQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRRFYIEEG 277 (330)
Q Consensus 198 L~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~~~~~~~ 277 (330)
-.++..++..||-+=- .-|--+.| +| -+-+.+++|++.. |--||+++...+++.--|- =
T Consensus 182 -~~f~k~~gKttVackD----tpGFIVNR---lL-------iPyl~ea~r~yer----GdAskeDIDtaMklGagyP--M 240 (298)
T KOG2304|consen 182 -VDFGKAVGKTTVACKD----TPGFIVNR---LL-------IPYLMEAIRMYER----GDASKEDIDTAMKLGAGYP--M 240 (298)
T ss_pred -HHHHHHhCCCceeecC----CCchhhhH---HH-------HHHHHHHHHHHHh----cCCcHhhHHHHHhccCCCC--C
Confidence 4688899999996655 45655555 33 3567779999965 7789999999998765442 1
Q ss_pred Cchhhhhhhhhhchhhhhhhccccccch-hhhhcCCCC
Q 020151 278 GRREIVGMMSAIGLSECQTIGRDLLLSV-EEEAYQPSE 314 (330)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 314 (330)
|.-| ..--|||.-|+.+=.-+--.. |+..|+||.
T Consensus 241 GPfE---L~DyvGLDt~kfvmdgwhe~~pe~~~f~psP 275 (298)
T KOG2304|consen 241 GPFE---LADYVGLDTCKFVMDGWHEGYPEDSLFAPSP 275 (298)
T ss_pred ChHH---HHHHhhHHHHHHHHHHHHhcCCcccccCCCh
Confidence 2333 334578888887754443333 566778774
No 112
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=64.46 E-value=45 Score=27.40 Aligned_cols=70 Identities=16% Similarity=0.233 Sum_probs=47.3
Q ss_pred HHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHh
Q 020151 169 QLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRM 248 (330)
Q Consensus 169 v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~ 248 (330)
.|.-+|+++ .|.+|.+++..|..++++++ .+-..+++.|- |.| + +...++-|..
T Consensus 4 KyRylFsli-sd~~g~~~~~~l~~lL~d~l-qip~~vgE~~a--------Fg~--~--------------e~sv~sCF~~ 57 (90)
T PF09069_consen 4 KYRYLFSLI-SDSNGCMDQRKLGLLLHDVL-QIPRAVGEGPA--------FGY--I--------------EPSVRSCFQQ 57 (90)
T ss_dssp HHHHHHHHH-S-TTS-B-HHHHHHHHHHHH-HHHHHTT-GGG--------GT------------------HHHHHHHHHH
T ss_pred HHHHHHHHH-cCCCCCCcHHHHHHHHHHHH-HHHHHhCcccc--------ccC--c--------------HHHHHHHhcc
Confidence 477889999 88999999999999999988 58888888876 444 2 5778888988
Q ss_pred cCCCCCCCcccHHHHHhhh
Q 020151 249 MDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 249 ~d~d~~~G~isk~eLr~~l 267 (330)
.-. +-+|+-+.+-+.+
T Consensus 58 ~~~---~~~I~~~~Fl~wl 73 (90)
T PF09069_consen 58 VQL---SPKITENQFLDWL 73 (90)
T ss_dssp TTT----S-B-HHHHHHHH
T ss_pred cCC---CCccCHHHHHHHH
Confidence 732 3456665555444
No 113
>PF14425 Imm3: Immunity protein Imm3
Probab=55.01 E-value=34 Score=29.59 Aligned_cols=93 Identities=16% Similarity=0.252 Sum_probs=60.4
Q ss_pred HHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccC-CCcccCHHHHHHH
Q 020151 115 KLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAE-GEEELGQAQFTEL 193 (330)
Q Consensus 115 ~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D-~DG~Vs~eEF~~l 193 (330)
.+++....-....+..+|.++| +.|..-+-.+--++..+-..+..=+.+-...+-+.+++|+.+ -.+.++++|+..+
T Consensus 18 ~e~~~~d~s~~eaiar~~~eye--~lg~~EkiIv~~~igEi~l~~~~i~~~~~~~i~~~L~~~~~~~~~~eLt~eE~~dL 95 (117)
T PF14425_consen 18 DEYLNEDRSYSEAIARTFDEYE--NLGETEKIIVDTAIGEILLSHNKIFVGQKEGITKRLSQFDFEEVKGELTQEEKEDL 95 (117)
T ss_pred HHHHHccCCHHHHHHHHHHHHH--ccCcHHHHHHHHHHHHHHhhcchHHhhHHHHHHHHHHhcChHHHHhHhhHHHHHHH
Confidence 3444444456677888888887 457776666666777765544221112122244446666543 3477899999999
Q ss_pred HHHHHHHHHHHhccCce
Q 020151 194 LRQVLQDIVDALADKHI 210 (330)
Q Consensus 194 mkkIL~~~A~~L~~~PV 210 (330)
++++- .+-.+|+.-||
T Consensus 96 ~~R~n-kVL~~l~~~~i 111 (117)
T PF14425_consen 96 SQRIN-KVLDGLEKVEI 111 (117)
T ss_pred HHHHH-HHHHHHhcCcc
Confidence 99876 67788988887
No 114
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=52.92 E-value=20 Score=34.09 Aligned_cols=97 Identities=13% Similarity=0.147 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCch-------hHHHHHH---HHHhhcCC-CCCCcccHHHHH
Q 020151 81 RDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNED-------DFTMLAE---NLFADLDT-EDEGKVCKGEIQ 149 (330)
Q Consensus 81 ~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~-------~F~~~v~---~~F~~LD~-d~DG~LS~~ELr 149 (330)
..||-.-|++.|-.+--+|... ..|.+.-++|. +|++-+- =.|-+||. ..||++|..||.
T Consensus 141 ltefp~rm~dwl~~vl~~l~~r---------~el~~~~~~e~~~ea~~~d~~k~i~pv~wqf~qld~~p~d~~~sh~el~ 211 (259)
T KOG4004|consen 141 LTEFPLRMRDWLKNVLVTLYER---------DELTEKHENEKRLEAGDHDFEKYIFPVHWQFGQLDQHPIDGYLSHTELA 211 (259)
T ss_pred HHhhhHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHhhcccccccceeeeeeeeeccccCCCccccccccccc
Confidence 3467777777777766666551 11222222211 2443222 13888886 569999999998
Q ss_pred HHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHH
Q 020151 150 NALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELL 194 (330)
Q Consensus 150 ~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lm 194 (330)
+. +.- =+|-. .-....|+-.|.|+||.|+..|....+
T Consensus 212 pl----~ap-~ipme---~c~~~f~e~cd~~nd~~ial~ew~~c~ 248 (259)
T KOG4004|consen 212 PL----RAP-LIPME---HCTTRFFETCDLDNDKYIALDEWAGCF 248 (259)
T ss_pred cc----cCC-cccHH---hhchhhhhcccCCCCCceeHHHhhccc
Confidence 62 110 11111 125678999999999999999997654
No 115
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=51.99 E-value=63 Score=35.06 Aligned_cols=164 Identities=16% Similarity=0.224 Sum_probs=90.8
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccC--CCcccCHHHHHHHHHHHHH----
Q 020151 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAE--GEEELGQAQFTELLRQVLQ---- 199 (330)
Q Consensus 126 ~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D--~DG~Vs~eEF~~lmkkIL~---- 199 (330)
+.+..+|+--|.|.||.||-.||- .++..+...-+.|... ..+..++++.=.+ -+..+...-|..+.+-..+
T Consensus 195 ~al~RIFki~D~d~D~~Lsd~Eln-~fQ~~CF~~pl~p~~l-~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfiergr~ 272 (625)
T KOG1707|consen 195 KALKRIFKISDSDNDGALSDAELN-DFQKKCFNTPLDPQEL-EDVKNVVQEICPDGVYERGLTLPGFLFLNTLFIERGRH 272 (625)
T ss_pred HHHHHHHhhhccccccccchhhhh-HHHHHhcCCCCCHHHH-HHHHHHHHhhcCchhhhccccccchHHHHHHHHHhccc
Confidence 356677888899999999999998 6777665443434432 2233333333221 2333345556665543322
Q ss_pred ----------------HHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHH
Q 020151 200 ----------------DIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDF 263 (330)
Q Consensus 200 ----------------~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eL 263 (330)
.+..-+-.-|+.+. .|+.+ =|++ ..+ .-++.+|..+|.|+ +|.++-+||
T Consensus 273 EttW~iLR~fgY~DsleL~~~~l~p~~~~~------p~~s~-----ELs~--~~~-~Fl~~~f~~~D~d~-Dg~L~p~El 337 (625)
T KOG1707|consen 273 ETTWTILRKFGYTDSLELTDEYLPPRLKVP------PDQSV-----ELSP--KGY-RFLVDVFEKFDRDN-DGALSPEEL 337 (625)
T ss_pred cchhhhhhhcCCcchhhhhhhhcCccccCC------CCcce-----eccH--HHH-HHHHHHHHhccCCC-CCCcCHHHH
Confidence 11222222222222 23333 2333 343 67888999999999 999999999
Q ss_pred Hhhhccc---c----cee-----ccCCchhhhhhhhhhchhhhhhhccccccchhhhhc
Q 020151 264 DDFIPMR---R----FYI-----EEGGRREIVGMMSAIGLSECQTIGRDLLLSVEEEAY 310 (330)
Q Consensus 264 r~~l~~~---~----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (330)
...++.- . .+. -..|.-.+-||++---|-+- -|+..+.+--+|
T Consensus 338 ~~LF~~~P~~pW~~~~~~~~t~~~~~G~ltl~g~l~~WsL~Tl----ld~~~t~~~L~Y 392 (625)
T KOG1707|consen 338 KDLFSTAPGSPWTSSPYKDSTVKNERGWLTLNGFLSQWSLMTL----LDPRRTLEYLAY 392 (625)
T ss_pred HHHhhhCCCCCCCCCcccccceecccceeehhhHHHHHHHHhh----ccHHHHHHHHHh
Confidence 9888211 1 111 14455567777765444321 244444554444
No 116
>TIGR03280 methan_mark_11 putative methanogenesis marker protein 11. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=51.12 E-value=25 Score=34.64 Aligned_cols=85 Identities=15% Similarity=0.285 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhh
Q 020151 187 QAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDF 266 (330)
Q Consensus 187 ~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~ 266 (330)
.++..+..++.+...+ +..+|-+++.+. +..-..|+. -.+.. + ..-+|++|-..+
T Consensus 202 ~~~l~~~a~~~l~~~s--~s~~pGIav~~~-~~~p~~L~~------------------fg~~A---k-~~vvt~eeA~~~ 256 (292)
T TIGR03280 202 KEKLAREFKKLLKEYT--LSDETAMAVYDG-LFPPKELKE------------------YGNKA---K-REMVSIEEAERV 256 (292)
T ss_pred HHHHHHHHHHHHHHhC--CCCCCEEEEEeC-CCCcHHHHH------------------HHHHH---H-hceeCHHHHHHH
Confidence 5677888888888777 667999888732 001112222 11111 2 366788888888
Q ss_pred hccccce-eccCCchhhhhhhhhhchhhhhh
Q 020151 267 IPMRRFY-IEEGGRREIVGMMSAIGLSECQT 296 (330)
Q Consensus 267 l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 296 (330)
.+..++. ..+||.|-|+|-+.|||+++|..
T Consensus 257 a~~~gi~l~~~~ggrGIIGALAAvGl~~~~~ 287 (292)
T TIGR03280 257 AERNNIEIIEVTGGRGIIGALAALGLYDRPE 287 (292)
T ss_pred HHHCCcEEEEeCCCCeeEeHHHhcccccCch
Confidence 8655544 67889999999999999998753
No 117
>cd07176 terB tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.
Probab=50.03 E-value=47 Score=26.24 Aligned_cols=86 Identities=13% Similarity=0.029 Sum_probs=50.0
Q ss_pred CCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEecccccc
Q 020151 140 EGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKII 219 (330)
Q Consensus 140 DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~ 219 (330)
||.++.+|+.....-+....++++... ..+.++|+..-.+. ...+..++...++..+.
T Consensus 16 DG~v~~~E~~~i~~~l~~~~~l~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------------------- 73 (111)
T cd07176 16 DGDIDDAELQAIEALLRSLPVLSGFDR-ERLIALLDKLLALL-RPEGLAALLKAAAKLLP-------------------- 73 (111)
T ss_pred ccCCCHHHHHHHHHHHHcCccccCCCH-HHHHHHHHHHHHHH-HHhhHHHHHHHHHHhCC--------------------
Confidence 799999999976666665566665442 23344444432221 13455666665554431
Q ss_pred CCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHh
Q 020151 220 DGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDD 265 (330)
Q Consensus 220 dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~ 265 (330)
. ......+..+|+....| |.++..|-+.
T Consensus 74 --~-------------~~r~~~~~~~~~ia~aD---G~~~~~E~~~ 101 (111)
T cd07176 74 --P-------------ELRETAFAVAVDIAAAD---GEVDPEERAV 101 (111)
T ss_pred --H-------------HHHHHHHHHHHHHHHcc---CCCCHHHHHH
Confidence 0 22246677777777665 7777776554
No 118
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=47.35 E-value=54 Score=25.67 Aligned_cols=49 Identities=18% Similarity=0.261 Sum_probs=31.9
Q ss_pred cccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHH
Q 020151 142 KVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 199 (330)
Q Consensus 142 ~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~ 199 (330)
.++-.-|-++|.. -+||.. ++.|...++.=..++|+.+||.+.+|.|.+
T Consensus 8 ~~~F~~L~~~l~~-----~l~~~~----~~~l~~~Y~~~k~~kIsR~~fvr~lR~IVG 56 (70)
T PF12174_consen 8 WMPFPMLFSALSK-----HLPPSK----MDLLQKHYEEFKKKKISREEFVRKLRQIVG 56 (70)
T ss_pred cccHHHHHHHHHH-----HCCHHH----HHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 4455555556655 233333 444444444447889999999999999986
No 119
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=46.33 E-value=9 Score=31.95 Aligned_cols=83 Identities=14% Similarity=0.210 Sum_probs=48.4
Q ss_pred CCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEecccccc
Q 020151 140 EGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKII 219 (330)
Q Consensus 140 DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~ 219 (330)
||.++.+|+.....-+....|+|+... ++++..++.-....++..+|...++..+.
T Consensus 37 DG~v~~~E~~~i~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~l~~~~~-------------------- 92 (140)
T PF05099_consen 37 DGEVDPEEIEAIRQLLAERFGLSPEEA----EELIELADELKQEPIDLEELLRELRDSLS-------------------- 92 (140)
T ss_dssp TSS--CHHHHHHHHHHHHCGCGSCHHH----HHHHHHHCHHHHHCCHHHHHHHHHCTS----------------------
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCHHHH----HHHHHHHHHHHhccccHHHHHHHHHHhhc--------------------
Confidence 799999999965555655567666553 44455444444446777777665443221
Q ss_pred CCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHH
Q 020151 220 DGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFD 264 (330)
Q Consensus 220 dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr 264 (330)
. ......+..+|...-.| |.++..|-.
T Consensus 93 -------------~--~~r~~ll~~l~~ia~AD---G~~~~~E~~ 119 (140)
T PF05099_consen 93 -------------P--EEREDLLRMLIAIAYAD---GEISPEEQE 119 (140)
T ss_dssp -------------H--HHHHHHHHHHHHHCTCT---TC-SCCHHH
T ss_pred -------------h--HHHHHHHHHHHHHHhcC---CCCCHHHHH
Confidence 0 22247778888888886 566655543
No 120
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=45.36 E-value=44 Score=37.45 Aligned_cols=64 Identities=16% Similarity=0.320 Sum_probs=52.2
Q ss_pred HHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHH
Q 020151 130 NLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIV 202 (330)
Q Consensus 130 ~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A 202 (330)
..|..|-. +.|+++-..-|.+|-+- |+|+ +++..|...-|.|+||..++.||-=.||=|.+.++
T Consensus 20 ~qF~~Lkp-~~gfitg~qArnfflqS----~LP~----~VLaqIWALsDldkDGrmdi~EfSIAmkLi~lkLq 83 (1118)
T KOG1029|consen 20 AQFGQLKP-GQGFITGDQARNFFLQS----GLPT----PVLAQIWALSDLDKDGRMDIREFSIAMKLIKLKLQ 83 (1118)
T ss_pred HHHhccCC-CCCccchHhhhhhHHhc----CCCh----HHHHHHHHhhhcCccccchHHHHHHHHHHHHHHhc
Confidence 34666654 58999999999999884 6665 46899999999999999999999988887776543
No 121
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=45.19 E-value=53 Score=28.86 Aligned_cols=62 Identities=15% Similarity=0.102 Sum_probs=42.6
Q ss_pred cccc-CC-CCCCccccHHHHHH-HHHcccc--ccccCCCCC-----hhHHHHHHhhhcCCCCcccccccccCHHHHHHH
Q 020151 19 QPLA-LP-TSDSSTVTGAQLLD-FAENEAS--SSLFGLSLP-----QNLKSTALKHISGSDDDVTFRIKEFDRDHASKL 87 (330)
Q Consensus 19 ~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~--~~~fg~~lp-----~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~ 87 (330)
.-|+ =| |.+ +.|.+=||.+ +-+.... +-|=-.++| ..+++.+|+.-|-+ .+|.||-.||+..
T Consensus 71 HYF~MHDldkn-n~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN------~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 71 HYFSMHDLDKN-NFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFN------GDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhccCcC-CcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccC------CCceeeHHHHHhh
Confidence 5577 56 888 9999999999 7766542 111123444 35788888876666 7899997777653
No 122
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase. This model represents pyruvate,phosphate dikinase, also called pyruvate,orthophosphate dikinase. It is similar in sequence to other PEP-utilizing enzymes.
Probab=45.09 E-value=5.1e+02 Score=29.37 Aligned_cols=140 Identities=16% Similarity=0.227 Sum_probs=88.2
Q ss_pred cCCCCChh--HHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhC------CCCeEEEEeCch-----hHH
Q 020151 49 FGLSLPQN--LKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELK------DDPLVVCVLDGN-----MLK 115 (330)
Q Consensus 49 fg~~lp~~--l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~------~~PI~v~v~DGS-----~L~ 115 (330)
.|+++|+. |=.++++.|-.+ ++. -.+.+..++...+..+....+ .+|.-+.+.-|+ .++
T Consensus 31 ~glpVPpGFviTt~a~~~~~~~-------~~~-~~~~l~~~i~~~~~~le~~~g~~fg~~~~PllvsvrS~a~~smpgm~ 102 (856)
T TIGR01828 31 LGLPVPPGFTITTEACNEYYAN-------GKQ-FPKGLQEEIKEALTLLEEKTGKKFGDTENPLLVSVRSGAAVSMPGMM 102 (856)
T ss_pred CCCCCCCcEEEeHHHHHHHHHc-------CCc-ccHHHHHHHHHHHHHHHHHhCcccCCCCCcceEEeccCCCCCCccHH
Confidence 37889963 444455555333 233 346788888888888886544 478889888873 233
Q ss_pred HhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhcc-ccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHH
Q 020151 116 LFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMG-VEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELL 194 (330)
Q Consensus 116 ~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lg-v~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lm 194 (330)
+.+-|=. ++..+...+... -++...-.+.+|..++..| +-+|+++..=+..++++.+..+...|+.+|-+...++.
T Consensus 103 ~tiLn~g-lnd~~~~~l~~~--~g~~~fa~d~yrRfi~~~g~vvl~v~~~~f~~~~~~~~~~~~~~~d~~~s~~~~~~l~ 179 (856)
T TIGR01828 103 DTILNLG-LNDETVEGLAKL--TGNARFAYDSYRRFIQMFGDVVLGIPHELFEQILEAMKEEKGVKLDTDLTADDLKELI 179 (856)
T ss_pred HHHHhCC-CCHHHHHHHHHh--hCChHHHHHHHHHHHhhhcccccCCCchhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 3332322 333344444432 2345666777887888776 56788877644557777777777788889988876666
Q ss_pred HHHHH
Q 020151 195 RQVLQ 199 (330)
Q Consensus 195 kkIL~ 199 (330)
+....
T Consensus 180 ~~f~~ 184 (856)
T TIGR01828 180 EKYKA 184 (856)
T ss_pred HHHHH
Confidence 65554
No 123
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=43.69 E-value=60 Score=36.69 Aligned_cols=70 Identities=14% Similarity=0.132 Sum_probs=52.5
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHH
Q 020151 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQ 196 (330)
Q Consensus 126 ~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkk 196 (330)
..+.+.|..+|..+.|.++.+++..||..+|...+-.... ...+-.|+...|.+..|.|+..+|-.-|.+
T Consensus 747 ~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~-~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R 816 (890)
T KOG0035|consen 747 DELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQG-IAEWFRLVNKKNPLIQGQVQLLEFEDDLER 816 (890)
T ss_pred HHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHH-HHHHHHHHhccCcccccceeHHHHHhHhhh
Confidence 3478889999999889999999999999988754210000 112455677888888899999999877664
No 124
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=42.11 E-value=2.9e+02 Score=31.23 Aligned_cols=161 Identities=13% Similarity=0.112 Sum_probs=108.1
Q ss_pred ChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHh
Q 020151 54 PQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFA 133 (330)
Q Consensus 54 p~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~ 133 (330)
|=.+...+|++.+-.+ ...-.+......-|-....++-..++- +|.=+=..+++++=.+.
T Consensus 418 ~ltl~l~if~~h~l~~-----~~e~m~~~~~i~~L~~~y~~l~e~~g~---------------~v~v~l~vD~~lN~llN 477 (966)
T KOG4286|consen 418 SLSLALDALDQHNLKQ-----NDQPMDILQIINCLTTIYDRLEQEHGN---------------LVNVPLCVDMCLNWLLN 477 (966)
T ss_pred cHHHHHHHHHHhcccc-----cCcCCCHHHHHHHHHHHHHHHHHHccc---------------ccccchHHHHHHHHHHH
Confidence 4467888999966662 333446555544444444444444433 55555567788888888
Q ss_pred hcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEe
Q 020151 134 DLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIII 213 (330)
Q Consensus 134 ~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va 213 (330)
-+|..++|+++.-+++.++-.++.-. ..+.|.-+|+.+..++...+ +..|..++.+.. .+-.+|++.--
T Consensus 478 vyD~~R~g~irvls~ki~~i~lck~~------leek~~ylF~~vA~~~sq~~-q~~l~lLL~dli-qipr~lGE~aA--- 546 (966)
T KOG4286|consen 478 VYDTGRTGRIRVLSFKIGIISLCKAH------LEDKYRYLFKQVASSTSQCD-QRRLGLLLHDLI-QIPRQLGEVAA--- 546 (966)
T ss_pred hcccCCCcceEEeeehhhHHHHhcch------hHHHHHHHHHHHcCchhhHH-HHHHHHHHHHHH-HHHHHHhHHHh---
Confidence 89999999999999999888876521 13458899999987776665 899988887755 46677776443
Q ss_pred ccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhh
Q 020151 214 PNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 214 ~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l 267 (330)
|.|+++ +...++-|+..-. .-.|+...|-+.+
T Consensus 547 -----fGgsNv--------------epsvrsCF~~v~~---~pei~~~~f~dw~ 578 (966)
T KOG4286|consen 547 -----FGGSNI--------------EPSVRSCFQFVNN---KPEIEAALFLDWM 578 (966)
T ss_pred -----hcCCCC--------------ChHHHHHHHhcCC---CCcchHHHHHHHh
Confidence 888888 5667778884321 2336666665555
No 125
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=42.06 E-value=96 Score=25.50 Aligned_cols=65 Identities=17% Similarity=0.277 Sum_probs=37.4
Q ss_pred HHHHhhcCCCCCCcccHHHHHHHHhhcc---ccCC-CCCCCC-hHHHHHHHhhhccCCCcccCHHHHHHHHHH
Q 020151 129 ENLFADLDTEDEGKVCKGEIQNALGHMG---VEFG-VPPFSE-FPQLNDILKKHGAEGEEELGQAQFTELLRQ 196 (330)
Q Consensus 129 ~~~F~~LD~d~DG~LS~~ELr~AL~~lg---v~~G-lPP~~~-~~v~d~If~e~D~D~DG~Vs~eEF~~lmkk 196 (330)
.-+|+++ .|++|.+++.-|...|..+- ...| .|..+. ...+.+.|+.. .....|+.++|...|+.
T Consensus 6 RylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 6 RYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHHT
T ss_pred HHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHHh
Confidence 4578888 67899999999988777641 1111 122222 22356667665 36777999999998874
No 126
>PRK09279 pyruvate phosphate dikinase; Provisional
Probab=40.53 E-value=5.6e+02 Score=29.18 Aligned_cols=139 Identities=16% Similarity=0.243 Sum_probs=89.2
Q ss_pred CCCCChh--HHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhC------CCCeEEEEeCchh--------
Q 020151 50 GLSLPQN--LKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELK------DDPLVVCVLDGNM-------- 113 (330)
Q Consensus 50 g~~lp~~--l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~------~~PI~v~v~DGS~-------- 113 (330)
|+++|+. |=.++.++|..+ .+. =.+.+.++++..+..+....+ .+|.-|+|--|+.
T Consensus 38 glpVPpgF~itt~ac~~~~~~-------~~~-~~~~l~~~i~~~l~~lE~~~g~~fg~~~~PLLvSVRSga~~SmPGmmd 109 (879)
T PRK09279 38 GLPVPPGFTITTEACNEYYAN-------GKK-LPEGLKEEVKEALAKLEELTGKKFGDPENPLLVSVRSGARVSMPGMMD 109 (879)
T ss_pred CCCCCCcEEEcHHHHHHHHhc-------Ccc-CcHHHHHHHHHHHHHHHHHhCcccCCCCCceeEEEecCCCCCCCCcch
Confidence 6779963 445555555444 122 346678888888888877777 5688888765553
Q ss_pred -HHHh-hcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhcc-ccCCCCCCCChHHHHHHHhhhccCCCcccCHHHH
Q 020151 114 -LKLF-LGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMG-VEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQF 190 (330)
Q Consensus 114 -L~~~-vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lg-v~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF 190 (330)
+..+ ++|+ ....+...- +|...-++..|.+++..+ +.+|+|+..=...++++-+......|..++-+..
T Consensus 110 TiLNlGlnd~------~~~~la~~t--g~~~fa~d~yrRfiq~~~~vv~gi~~~~fe~~~~~~k~~~~~~~~~~l~~~~l 181 (879)
T PRK09279 110 TVLNLGLNDE------TVEGLAKKT--GNERFAYDSYRRFIQMFGDVVLGIDHELFEEILEELKEKKGVKLDTDLTAEDL 181 (879)
T ss_pred hhhcCCCCHH------HHHHHHHhc--CChhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCCCCccCCCHHHH
Confidence 2223 2222 233333322 344566777888999988 6789987664445666666777777888888888
Q ss_pred HHHHHHHHHHHHHH
Q 020151 191 TELLRQVLQDIVDA 204 (330)
Q Consensus 191 ~~lmkkIL~~~A~~ 204 (330)
+++++.....+...
T Consensus 182 ~~l~~~~k~~~~~~ 195 (879)
T PRK09279 182 KELVERYKEIVKEE 195 (879)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877777655544
No 127
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=40.27 E-value=1.1e+02 Score=24.09 Aligned_cols=85 Identities=19% Similarity=0.260 Sum_probs=48.3
Q ss_pred CCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEecccccc
Q 020151 140 EGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKII 219 (330)
Q Consensus 140 DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~ 219 (330)
||.++.+|.. .+.++-..+..++. ....+...+..-.+...+..+|.+.++.... .
T Consensus 13 DG~v~~~E~~-~i~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~------------ 68 (106)
T cd07316 13 DGRVSEAEIQ-AARALMDQMGLDAE----ARREAIRLFNEGKESDFGLEEYARQFRRACG-------G------------ 68 (106)
T ss_pred cCCcCHHHHH-HHHHHHHHcCCCHH----HHHHHHHHHHHhCcCCCCHHHHHHHHHHHHC-------C------------
Confidence 7999999988 45554333433322 2344444443333333677888776665431 0
Q ss_pred CCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHh
Q 020151 220 DGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDD 265 (330)
Q Consensus 220 dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~ 265 (330)
.. ......+..+|+-.-.| |.++..|-+-
T Consensus 69 -~~-------------~~r~~~l~~l~~vA~AD---G~~~~~E~~~ 97 (106)
T cd07316 69 -RP-------------ELLLQLLEFLFQIAYAD---GELSEAEREL 97 (106)
T ss_pred -CH-------------HHHHHHHHHHHHHHHHc---CCCCHHHHHH
Confidence 00 11246777788877775 7888877654
No 128
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=39.72 E-value=28 Score=38.93 Aligned_cols=154 Identities=14% Similarity=0.141 Sum_probs=105.1
Q ss_pred cccc-CC-CCCCccccHHHHHH-HHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHH
Q 020151 19 QPLA-LP-TSDSSTVTGAQLLD-FAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAI 95 (330)
Q Consensus 19 ~~F~-LD-d~D~G~LS~aEl~~-l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~ai 95 (330)
..|. +| ..+ |.+++++-.. ++..+ ||+.+...+-.-.+.. +.|.+++..|..-||.+-.+=
T Consensus 15 ~~~~~~d~~~~-G~i~g~~a~~f~~~s~---------L~~qvl~qiws~~d~~------~~g~l~~q~f~~~lrlva~aq 78 (847)
T KOG0998|consen 15 QYFKSADPQGD-GRITGAEAVAFLSKSG---------LPDQVLGQIWSLADSS------GKGFLNRQGFYAALRLVAQAQ 78 (847)
T ss_pred HhhhccCcccC-CcccHHHhhhhhhccc---------cchhhhhccccccccc------cCCccccccccccchHhhhhh
Confidence 5688 88 778 9999999998 66554 6788877777766666 678899999999999887654
Q ss_pred HHHhCCCCeEEE------------------EeC-----chhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHH
Q 020151 96 ADELKDDPLVVC------------------VLD-----GNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNAL 152 (330)
Q Consensus 96 Ad~L~~~PI~v~------------------v~D-----GS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL 152 (330)
...-...+.+.- +.. +..+--+=-+++ ..-+.+|..+..+ +|.++-.-.+++|
T Consensus 79 ~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~s~~~~~p~~~~qe~---aky~q~f~s~~p~-~g~~sg~~~~pil 154 (847)
T KOG0998|consen 79 SGRELSAKKVLPASAVPPPPKISHDTSPPSRPSSSTSAAPFVPAITPQEQ---AKYDQIFRSLSPS-NGLLSGDKAKPIL 154 (847)
T ss_pred cccCcCccccccccCCCCCCccCccCCCcccCCCCCCCcccCCCCCHHHH---HHHHHHHhccCCC-CCccccchhhhhh
Confidence 332222221100 111 222211112221 2345669999987 8999999999988
Q ss_pred hhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHH
Q 020151 153 GHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQD 200 (330)
Q Consensus 153 ~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~ 200 (330)
.+- ++|.. +.-.|-...|.|.+|.++..||.--|+-+...
T Consensus 155 ~~s----~Lp~~----~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~~~ 194 (847)
T KOG0998|consen 155 LNS----KLPSD----VLGRIWELSDIDKDGNLDRDEFAVAMHLINDL 194 (847)
T ss_pred hcC----CCChh----hhccccccccccccCCCChhhhhhhhhHHHHH
Confidence 883 33332 34567778899999999999999998877653
No 129
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=39.44 E-value=97 Score=26.67 Aligned_cols=82 Identities=16% Similarity=0.169 Sum_probs=52.4
Q ss_pred HHHHHHHhhhccCC--CcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHH
Q 020151 168 PQLNDILKKHGAEG--EEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQL 245 (330)
Q Consensus 168 ~v~d~If~e~D~D~--DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~ 245 (330)
|.+.++|.++.-+. |..++..+....+..+-...+.++...+ .+- +. .+. .+.+-.++=+
T Consensus 41 ~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~-~i~-~~------~v~----------~a~~L~ln~L 102 (127)
T PF09068_consen 41 SNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLH-QIP-SR------PVD----------LAVDLLLNWL 102 (127)
T ss_dssp HHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS---HH----------------------HHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CCC-ch------hHH----------HHHHHHHHHH
Confidence 45677788776553 4669999999999999987777766644 100 00 011 1225677778
Q ss_pred HHhcCCCCCCCcccHHHHHhhhc
Q 020151 246 FRMMDTWDMVYLLTKSDFDDFIP 268 (330)
Q Consensus 246 F~~~d~d~~~G~isk~eLr~~l~ 268 (330)
+..+|.++ +|+|+.-.++..|.
T Consensus 103 l~vyD~~r-tG~I~vls~KvaL~ 124 (127)
T PF09068_consen 103 LNVYDSQR-TGKIRVLSFKVALI 124 (127)
T ss_dssp HHHH-TT---SEEEHHHHHHHHH
T ss_pred HHHhCCCC-CCeeehhHHHHHHH
Confidence 99999999 99999998887763
No 130
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=37.86 E-value=82 Score=29.05 Aligned_cols=39 Identities=13% Similarity=0.113 Sum_probs=30.9
Q ss_pred hhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhccccceecc
Q 020151 230 MLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRRFYIEE 276 (330)
Q Consensus 230 ~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~~~~~~ 276 (330)
|+-.||+ ++|..+.+.+ .+.+|..|+..+++-+|.--|-
T Consensus 93 Fvp~kFe-------~iF~kya~~~-~d~LT~~E~~~m~~~nr~~~D~ 131 (174)
T PF05042_consen 93 FVPQKFE-------EIFSKYAKTG-PDALTLRELWRMLKGNRNANDP 131 (174)
T ss_pred CCHHHHH-------HHHHHhCCCC-CCCcCHHHHHHHHHhccccCCc
Confidence 6666644 4999999987 7999999999999777765553
No 131
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=36.93 E-value=2.1e+02 Score=22.51 Aligned_cols=92 Identities=14% Similarity=0.198 Sum_probs=50.7
Q ss_pred CCCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCeE
Q 020151 26 SDSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLV 105 (330)
Q Consensus 26 ~D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~ 105 (330)
-| |.+|.+|...+...-.. +.+++.-...+...|... .+...+..+|...+++ .++.
T Consensus 12 aD-G~v~~~E~~~i~~~l~~-----~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~-------~~~~---- 68 (106)
T cd07316 12 AD-GRVSEAEIQAARALMDQ-----MGLDAEARREAIRLFNEG------KESDFGLEEYARQFRR-------ACGG---- 68 (106)
T ss_pred cc-CCcCHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHh------CcCCCCHHHHHHHHHH-------HHCC----
Confidence 47 99999999886665433 223344444555555444 3333554444444333 2221
Q ss_pred EEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccc
Q 020151 106 VCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGV 157 (330)
Q Consensus 106 v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv 157 (330)
++..=..++..+|.---. ||.++..|-. .|.+++.
T Consensus 69 --------------~~~~r~~~l~~l~~vA~A--DG~~~~~E~~-~l~~ia~ 103 (106)
T cd07316 69 --------------RPELLLQLLEFLFQIAYA--DGELSEAERE-LLRRIAR 103 (106)
T ss_pred --------------CHHHHHHHHHHHHHHHHH--cCCCCHHHHH-HHHHHHH
Confidence 222233455666665555 4888888876 6665543
No 132
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=36.41 E-value=29 Score=27.18 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=21.3
Q ss_pred HHHHHHhhcCCCCCCcccHHHHHHHH
Q 020151 127 LAENLFADLDTEDEGKVCKGEIQNAL 152 (330)
Q Consensus 127 ~v~~~F~~LD~d~DG~LS~~ELr~AL 152 (330)
.+.+.|+.+ .++.++||.++||.+|
T Consensus 7 qv~~aFr~l-A~~KpyVT~~dLr~~l 31 (69)
T PF08726_consen 7 QVEEAFRAL-AGGKPYVTEEDLRRSL 31 (69)
T ss_dssp HHHHHHHHH-CTSSSCEEHHHHHHHS
T ss_pred HHHHHHHHH-HcCCCcccHHHHHHHc
Confidence 378899999 6778999999999763
No 133
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=35.74 E-value=20 Score=29.90 Aligned_cols=41 Identities=17% Similarity=0.218 Sum_probs=29.8
Q ss_pred hhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCC
Q 020151 122 DDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFS 165 (330)
Q Consensus 122 ~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~ 165 (330)
..-..++..+|.-.-.| |.++..|-+ .+.++...+|+|+..
T Consensus 94 ~~r~~ll~~l~~ia~AD--G~~~~~E~~-~l~~ia~~L~i~~~~ 134 (140)
T PF05099_consen 94 EEREDLLRMLIAIAYAD--GEISPEEQE-FLRRIAEALGISEED 134 (140)
T ss_dssp HHHHHHHHHHHHHCTCT--TC-SCCHHH-HHHHHHHHCTS-SS-
T ss_pred HHHHHHHHHHHHHHhcC--CCCCHHHHH-HHHHHHHHcCCCHHH
Confidence 33456777888887775 789888887 888888888998865
No 134
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=35.62 E-value=35 Score=26.22 Aligned_cols=26 Identities=27% Similarity=0.491 Sum_probs=21.9
Q ss_pred HHHHHHHhcCCCCCCCcccHHHHHhhhc
Q 020151 241 CREQLFRMMDTWDMVYLLTKSDFDDFIP 268 (330)
Q Consensus 241 ~l~~~F~~~d~d~~~G~isk~eLr~~l~ 268 (330)
++..+|+.+-. + .+.+|.++|+.||.
T Consensus 1 ei~~if~~ys~-~-~~~mt~~~f~~FL~ 26 (83)
T PF09279_consen 1 EIEEIFRKYSS-D-KEYMTAEEFRRFLR 26 (83)
T ss_dssp HHHHHHHHHCT-T-SSSEEHHHHHHHHH
T ss_pred CHHHHHHHHhC-C-CCcCCHHHHHHHHH
Confidence 35679999966 4 69999999999994
No 135
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=35.20 E-value=56 Score=39.25 Aligned_cols=84 Identities=13% Similarity=0.264 Sum_probs=58.3
Q ss_pred HHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHH----HHHHHHHHh
Q 020151 130 NLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQ----VLQDIVDAL 205 (330)
Q Consensus 130 ~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkk----IL~~~A~~L 205 (330)
..|++.|.|+.|.||+.+..+|++...- -....++-++.+..+|.+...++++|.+-+.+ |--.+|--|
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~k~-------ytqse~dfllscae~dend~~~y~dfv~rfhepakdigfnvavll 4133 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGHKH-------YTQSEIDFLLSCAEADENDMFDYEDFVDRFHEPAKDIGFNVAVLL 4133 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhcccc-------chhHHHHHHHHhhccCccccccHHHHHHHhcCchhhcCcchhhhh
Confidence 4599999999999999999999987321 01123666788999999999999999988754 333333333
Q ss_pred ccCceEEeccccccCCchhhH
Q 020151 206 ADKHIIIIPNIKIIDGSKLRM 226 (330)
Q Consensus 206 ~~~PV~va~~e~~~dGs~l~~ 226 (330)
.. .+|..-+.+.++-
T Consensus 4134 tn------lsehmpndsrlk~ 4148 (5019)
T KOG2243|consen 4134 TN------LSEHMPNDSRLKC 4148 (5019)
T ss_pred hh------hHhhCCCchhHHH
Confidence 22 2344455666655
No 136
>PRK13239 alkylmercury lyase; Provisional
Probab=33.81 E-value=74 Score=29.92 Aligned_cols=103 Identities=18% Similarity=0.214 Sum_probs=64.4
Q ss_pred CCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHH
Q 020151 163 PFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCR 242 (330)
Q Consensus 163 P~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l 242 (330)
+....++.-.|+.++. +.++|+.+++.+.+..-.+.+...|..-|.++.. .+|.-+.-
T Consensus 17 ~~~~~~~~~~llr~la--~G~pvt~~~lA~~~~~~~~~v~~~L~~l~~~~~d----~~g~iv~~---------------- 74 (206)
T PRK13239 17 PGGTATLLVPLLRLLA--KGRPVSVTTLAAALGWPVEEVEAVLEAMPDTEYD----EDGRIIGY---------------- 74 (206)
T ss_pred CCcchHHHHHHHHHHH--cCCCCCHHHHHHHhCCCHHHHHHHHHhCCCeEEC----CCCCEEec----------------
Confidence 3444677888888887 5778899998887776666666666666655443 12222200
Q ss_pred HHHHHhcCCCCCCCcccHHHHHhhhccccceeccCCchhhh--------hhhhhhc-----hhhhhhhccccccchhhhh
Q 020151 243 EQLFRMMDTWDMVYLLTKSDFDDFIPMRRFYIEEGGRREIV--------GMMSAIG-----LSECQTIGRDLLLSVEEEA 309 (330)
Q Consensus 243 ~~~F~~~d~d~~~G~isk~eLr~~l~~~~~~~~~~~~~~~~--------~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 309 (330)
=|...|..| +++| +||+ +. |+...+| -|.|...|..+-+.|+...
T Consensus 75 --plS~~pT~H-----------------~v~v--~Gr~-lyt~CA~DALg~~a~lg~~a~I~S~cp~tG~~I~ltv~~~~ 132 (206)
T PRK13239 75 --GLTLRPTPH-----------------RFEV--DGRQ-LYTWCALDTLIFPALIGRTARVESHCPATGAPVRLTVTPSG 132 (206)
T ss_pred --cccCCCcCc-----------------EEEE--CCEE-EEeehHHHHhhhHHHcCCCeEEEecCCCCCCeEEEEEcCCc
Confidence 233444444 4555 6765 43 3334444 3689989999999888765
No 137
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=32.57 E-value=79 Score=29.22 Aligned_cols=38 Identities=24% Similarity=0.394 Sum_probs=34.2
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCchhH
Q 020151 77 KEFDRDHASKLASDYITAIADELK-DDPLVVCVLDGNML 114 (330)
Q Consensus 77 ~~vd~eeF~~~lk~~l~aiAd~L~-~~PI~v~v~DGS~L 114 (330)
--+|++|..+..++.-..|+...+ .+|++|.++.||..
T Consensus 10 vLisee~I~~ri~ela~~I~~~y~g~~~~vv~iLkGs~~ 48 (178)
T COG0634 10 VLISEEQIKARIKELAAQITEDYGGKDPLVVGVLKGSFP 48 (178)
T ss_pred EeeCHHHHHHHHHHHHHHHHHhhCCCceEEEEEcccchh
Confidence 356999999999999999999999 88999999999953
No 138
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=32.50 E-value=59 Score=33.31 Aligned_cols=100 Identities=12% Similarity=0.179 Sum_probs=69.0
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhcc
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALAD 207 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~ 207 (330)
+..-|+.+-.+.++..+..-+-.+-.. .+..+||.=-. .+-=||...|.|.|+.+|+.|....-.
T Consensus 213 L~dWF~~lhe~s~~~~~~ss~~~~~~~--~d~s~~p~CKd-s~gWMFnklD~N~Dl~Ld~sEl~~I~l------------ 277 (434)
T KOG3555|consen 213 LRDWFKALHEDSSQNDKTSSLHSAASG--FDTSILPICKD-SLGWMFNKLDTNYDLLLDQSELRAIEL------------ 277 (434)
T ss_pred HHHHHHHHHhhhhccCcchhhcccccc--cccccCcchhh-hhhhhhhccccccccccCHHHhhhhhc------------
Confidence 556788887776665544444433332 34455554321 134479999999999999998755311
Q ss_pred CceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhcccc
Q 020151 208 KHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRR 271 (330)
Q Consensus 208 ~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~ 271 (330)
. -++.+.+..|.+.|..+ +|+||-.|--.++-...
T Consensus 278 ------------------------d----knE~CikpFfnsCD~~k-Dg~iS~~EWC~CF~k~~ 312 (434)
T KOG3555|consen 278 ------------------------D----KNEACIKPFFNSCDTYK-DGSISTNEWCYCFQKSD 312 (434)
T ss_pred ------------------------c----CchhHHHHHHhhhcccc-cCccccchhhhhhccCC
Confidence 1 12688999999999999 99999999998884444
No 139
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=32.04 E-value=84 Score=32.83 Aligned_cols=57 Identities=18% Similarity=0.278 Sum_probs=41.6
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHH
Q 020151 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFT 191 (330)
Q Consensus 126 ~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~ 191 (330)
...+.+|-.+-.- ||+||-.--+..+.+- -+| +.++-.|.+..|.|.||.++.+||+
T Consensus 444 ~~yde~fy~l~p~-~gk~sg~~ak~~mv~s----klp----nsvlgkiwklad~d~dg~ld~eefa 500 (532)
T KOG1954|consen 444 PTYDEIFYTLSPV-NGKLSGRNAKKEMVKS----KLP----NSVLGKIWKLADIDKDGMLDDEEFA 500 (532)
T ss_pred cchHhhhhccccc-CceeccchhHHHHHhc----cCc----hhHHHhhhhhhcCCcccCcCHHHHH
Confidence 3467888888654 7888866555544431 222 3468899999999999999999993
No 140
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=31.76 E-value=37 Score=34.54 Aligned_cols=40 Identities=20% Similarity=0.227 Sum_probs=34.1
Q ss_pred HHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhh
Q 020151 115 KLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGH 154 (330)
Q Consensus 115 ~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~ 154 (330)
+.+|.......++....|++-|.|+|-+||-.|++.+|..
T Consensus 359 K~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 359 KRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred HHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 5555556667788999999999999999999999999876
No 141
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=31.73 E-value=6.9e+02 Score=28.06 Aligned_cols=99 Identities=13% Similarity=0.204 Sum_probs=68.2
Q ss_pred hhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhh
Q 020151 55 QNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFAD 134 (330)
Q Consensus 55 ~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~ 134 (330)
++-..++|.+.|.+ .++.++..+....++.+.-.|- +.. +..+|++
T Consensus 135 ~~wi~~~~~~ad~~------~~~~~~~~~~~~~~~~~n~~l~-----------------------~~~-----~~~~f~e 180 (746)
T KOG0169|consen 135 EHWIHSIFQEADKN------KNGHMSFDEVLDLLKQLNVQLS-----------------------ESK-----ARRLFKE 180 (746)
T ss_pred HHHHHHHHHHHccc------cccccchhhHHHHHHHHHHhhh-----------------------HHH-----HHHHHHH
Confidence 46788899998888 8888886666666655544332 223 5566777
Q ss_pred cCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHH
Q 020151 135 LDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 197 (330)
Q Consensus 135 LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkI 197 (330)
.|.-.+|++..++.+.....++. +| .+..+|.++-.+ .+.++-++...++...
T Consensus 181 ~~~~~~~k~~~~~~~~~~~~~~~----rp-----ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~ 233 (746)
T KOG0169|consen 181 SDNSQTGKLEEEEFVKFRKELTK----RP-----EVYFLFVQYSHG-KEYLSTDDLLRFLEEE 233 (746)
T ss_pred HHhhccceehHHHHHHHHHhhcc----Cc-----hHHHHHHHHhCC-CCccCHHHHHHHHHHh
Confidence 78888999999999988777644 33 256677777555 6677766666665544
No 142
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=30.97 E-value=2.3e+02 Score=24.95 Aligned_cols=56 Identities=16% Similarity=0.189 Sum_probs=36.0
Q ss_pred CCcccHHHHHHHHhhccccCCC-CCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHH
Q 020151 140 EGKVCKGEIQNALGHMGVEFGV-PPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 199 (330)
Q Consensus 140 DG~LS~~ELr~AL~~lgv~~Gl-PP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~ 199 (330)
...++-.-..+.+..- || +..-....++-||..+-..+...|++++|...|..|..
T Consensus 16 ~~~m~~~~F~Kl~kD~----~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~ 72 (154)
T PF05517_consen 16 GTEMDSKNFAKLCKDC----GIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAE 72 (154)
T ss_dssp SSEEEHHHHHHHHHHT----SS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHc----CCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHH
Confidence 3456555555555554 44 33333445888999987777777999999999887664
No 143
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=29.64 E-value=2.2e+02 Score=26.87 Aligned_cols=136 Identities=15% Similarity=0.231 Sum_probs=78.8
Q ss_pred cccHHHHHHHHhh----ccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHhccCceEEecccc
Q 020151 142 KVCKGEIQNALGH----MGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIK 217 (330)
Q Consensus 142 ~LS~~ELr~AL~~----lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~ 217 (330)
.++..++...+.+ ++.++--||.-. ..++ + . .....+.+.+.. ...+...++..||++ .+
T Consensus 123 g~~~~~la~~~~~~~r~ig~hf~~P~~~~-----~~vE-v-~-~g~~T~~e~~~~-----~~~~~~~lgk~~v~v-~d-- 186 (291)
T PRK06035 123 GIMIAEIATALERKDRFIGMHWFNPAPVM-----KLIE-V-V-RAALTSEETFNT-----TVELSKKIGKIPIEV-AD-- 186 (291)
T ss_pred CCCHHHHHhhcCCcccEEEEecCCCcccC-----ccEE-E-e-CCCCCCHHHHHH-----HHHHHHHcCCeEEEe-CC--
Confidence 3677888877765 344443343321 1111 2 1 122236666632 345667899999988 42
Q ss_pred ccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhccccceeccCCchhhhhhhhhhchhhhhhh
Q 020151 218 IIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRRFYIEEGGRREIVGMMSAIGLSECQTI 297 (330)
Q Consensus 218 ~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (330)
-.| |+.| ...-..++++++.++. |-.|.+++...+... .|-+.-...++-.+||..+..+
T Consensus 187 -~pg--------fv~n--Rl~~~~~~ea~~~~~~----g~a~~~~iD~~~~~~-----~g~~~Gp~~~~D~~Gl~~~~~~ 246 (291)
T PRK06035 187 -VPG--------FFTT--RFIEGWLLEAIRSFEI----GIATIKDIDEMCKLA-----FGFPMGPFELMDIIGIDTVYHI 246 (291)
T ss_pred -CCC--------eeHH--HHHHHHHHHHHHHHHc----CCCCHHHHHHHHhhc-----CCCccCHHHHHHHhhHHHHHHH
Confidence 223 2333 2333677888888844 778999999987421 2223445667888899888887
Q ss_pred ccccccchhhhhcCCC
Q 020151 298 GRDLLLSVEEEAYQPS 313 (330)
Q Consensus 298 ~~~~~~~~~~~~~~~~ 313 (330)
.+.+.-..-+..|.|+
T Consensus 247 ~~~l~~~~~~~~~~~~ 262 (291)
T PRK06035 247 AEYLYEETGDPQFIPP 262 (291)
T ss_pred HHHHHHHcCCCcCCcc
Confidence 7765433333455543
No 144
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=29.27 E-value=96 Score=29.84 Aligned_cols=70 Identities=11% Similarity=0.149 Sum_probs=43.2
Q ss_pred hHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHH
Q 020151 123 DFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 198 (330)
Q Consensus 123 ~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL 198 (330)
.|-..+-.+.-.+=+- ||.+|..|++ ....+-..+++++..- ....++|++- .....+.++|+..++...
T Consensus 53 ~ff~a~~aLl~~vAkA-DG~Vse~Ei~-~~~~l~~~~~l~~~~r-~~a~~lf~~~---k~~~~~l~~~~~~~~~~~ 122 (267)
T PRK09430 53 LFFNTTFAVMGHLAKA-KGRVTEADIR-IASQLMDRMNLHGEAR-RAAQQAFREG---KEPDFPLREKLRQFRSVC 122 (267)
T ss_pred HHHHHHHHHHHHHHhc-CCCcCHHHHH-HHHHHHHHcCCCHHHH-HHHHHHHHHh---cccCCCHHHHHHHHHHHh
Confidence 3434455555555554 8999999998 6666555567765442 1234555544 444478889988777644
No 145
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=28.94 E-value=86 Score=24.83 Aligned_cols=89 Identities=15% Similarity=0.118 Sum_probs=58.5
Q ss_pred CCccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 020151 27 DSSTVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVV 106 (330)
Q Consensus 27 D~G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v 106 (330)
| |.+|.+|...+..+-.. +|| +++.....++..+... .....+..+|...++...
T Consensus 13 D-G~v~~~E~~~i~~~l~~--~~~--l~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~-------------- 67 (104)
T cd07313 13 D-GEYDEEERAAIDRLLAE--RFG--LDAEEAAELLAEAEAL------EEEAPDLYEFTSLIKEHF-------------- 67 (104)
T ss_pred c-CCCCHHHHHHHHHHHHH--HhC--cCHHHHHHHHHHHHHH------HHhCCCHHHHHHHHHHhC--------------
Confidence 6 99999999886655322 344 6777778888887777 567788777766654321
Q ss_pred EEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhcc
Q 020151 107 CVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMG 156 (330)
Q Consensus 107 ~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lg 156 (330)
++..=..++..+|+---.| |.++..|.. .+.+++
T Consensus 68 -------------~~~~r~~~l~~L~~vA~AD--G~~~~~E~~-~l~~ia 101 (104)
T cd07313 68 -------------DYEERLELVEALWEVAYAD--GELDEYEEH-LIRRVA 101 (104)
T ss_pred -------------CHHHHHHHHHHHHHHHHhc--CCCCHHHHH-HHHHHH
Confidence 1222334566666666654 888888877 666543
No 146
>PRK04220 2-phosphoglycerate kinase; Provisional
Probab=27.37 E-value=4.1e+02 Score=26.34 Aligned_cols=69 Identities=19% Similarity=0.288 Sum_probs=50.2
Q ss_pred cccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHH-----------HHHHhc--cC
Q 020151 142 KVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQD-----------IVDALA--DK 208 (330)
Q Consensus 142 ~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~-----------~A~~L~--~~ 208 (330)
..||--|..-|.. .|+||.-+-.+..+|.+.+-.++-..++.+|+.+.+.+.|.. +...+. ..
T Consensus 16 pfSrgiL~rsL~~----~g~~~~~A~~iA~~i~~~L~~~g~~~i~~~el~~~V~~~L~~~~~~~~~~~y~~~~~i~~~~~ 91 (301)
T PRK04220 16 PFSKGILARSLTA----AGMKPSIAYEIASEIEEELKKEGIKEITKEELRRRVYYKLIEKDYEEVAEKYLLWRRIRKSKE 91 (301)
T ss_pred CCcHHHHHHHHHH----cCCChhHHHHHHHHHHHHHHHcCCEEeeHHHHHHHHHHHHHHhCcHhHHHHHHHHHHHhcCCC
Confidence 4577777766666 488898888888888888877788889999998887766543 223333 37
Q ss_pred ceEEec
Q 020151 209 HIIIIP 214 (330)
Q Consensus 209 PV~va~ 214 (330)
|++++.
T Consensus 92 p~iIlI 97 (301)
T PRK04220 92 PIIILI 97 (301)
T ss_pred CEEEEE
Confidence 887776
No 147
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=27.24 E-value=67 Score=21.08 Aligned_cols=18 Identities=11% Similarity=0.370 Sum_probs=14.9
Q ss_pred CCcccCHHHHHHHHHHHH
Q 020151 181 GEEELGQAQFTELLRQVL 198 (330)
Q Consensus 181 ~DG~Vs~eEF~~lmkkIL 198 (330)
..|.||.+||.+.-++++
T Consensus 13 ~~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 13 DKGEISEEEYEQKKARLL 30 (31)
T ss_pred HcCCCCHHHHHHHHHHHh
Confidence 368899999998877765
No 148
>TIGR02698 CopY_TcrY copper transport repressor, CopY/TcrY family. This family includes metal-fist type transcriptional repressors of copper transport systems such as copYZAB of Enterococcus hirae and tcrYAZB (transferble copper resistance) of an Enterocuccus faecium plasmid. High levels of copper can displace zinc and prevent binding by the repressor, activating efflux by copper resistance transporters. The most closely related proteins excluded by this model are antibiotic resistance regulators including the methicillin resistance regulatory protein MecI.
Probab=26.48 E-value=2.3e+02 Score=24.17 Aligned_cols=56 Identities=11% Similarity=0.090 Sum_probs=30.3
Q ss_pred CCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHh--hhccCCCcc-------cCHHHHH-HHHHHHH
Q 020151 140 EGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILK--KHGAEGEEE-------LGQAQFT-ELLRQVL 198 (330)
Q Consensus 140 DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~--e~D~D~DG~-------Vs~eEF~-~lmkkIL 198 (330)
.|.+|..|+...|..- .|+.+..-.-.++.+.+ -+....+|. |+++||. ..+++++
T Consensus 16 ~~~~t~~eI~~~l~~~---~~~~~tTv~T~L~rL~~KG~v~~~k~gr~~~Y~p~vs~ee~~~~~~~~~~ 81 (130)
T TIGR02698 16 LGETTSRDIIRILAEK---KDWSDSTIKTLLGRLVDKGCLTTEKEGRKFIYTALVSEDEAVENAAQELF 81 (130)
T ss_pred CCCCCHHHHHHHHhhc---cCCcHHHHHHHHHHHHHCCceeeecCCCcEEEEecCCHHHHHHHHHHHHH
Confidence 3457888888877542 22222222223444433 234445676 7999995 4445554
No 149
>PRK11409 antitoxin YefM; Provisional
Probab=26.11 E-value=1.7e+02 Score=23.25 Aligned_cols=76 Identities=11% Similarity=0.206 Sum_probs=49.3
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccc
Q 020151 78 EFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGV 157 (330)
Q Consensus 78 ~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv 157 (330)
.++-.+|+..|.+|+..+.+. ..||+|..-++. .-.+-+.++|+...+.++-.-+.. ..+-|+.+++++..
T Consensus 3 ~i~~s~~R~~l~~~l~~v~~~--~epv~ITr~g~~--~~Vl~S~~~yesl~Etl~ll~~p~-----~~~~l~~~i~~~~~ 73 (83)
T PRK11409 3 TISYSEARQNLSATMMKAVED--HAPILITRQNGE--ACVLMSLEEYNSLEETAYLLRSPA-----NARRLMDSIDSLKS 73 (83)
T ss_pred eEcHHHHHHHHHHHHHHHhcc--CCcEEEEeCCCC--CEEEEeHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHc
Confidence 356789999999999887764 789998877653 234556667887777654442211 14456667777655
Q ss_pred cCCCC
Q 020151 158 EFGVP 162 (330)
Q Consensus 158 ~~GlP 162 (330)
..|.+
T Consensus 74 G~~~~ 78 (83)
T PRK11409 74 GKGTE 78 (83)
T ss_pred CCCcc
Confidence 44444
No 150
>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells. PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi,
Probab=26.06 E-value=1.3e+02 Score=24.65 Aligned_cols=56 Identities=13% Similarity=0.135 Sum_probs=41.3
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCC
Q 020151 182 EEELGQAQFTELLRQVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWD 253 (330)
Q Consensus 182 DG~Vs~eEF~~lmkkIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~ 253 (330)
+..++++++++.++++- .-...+|.+|=--+ .+|..+ -+|+ +.+|..|||.+...+
T Consensus 17 d~~~s~e~L~~~v~~~c----~~~~~q~ft~kw~D--EEGDp~-----tiSS-----~~EL~EA~rl~~~n~ 72 (83)
T cd06404 17 DPSISLEELCNEVRDMC----RFHNDQPFTLKWID--EEGDPC-----TISS-----QMELEEAFRLYELNK 72 (83)
T ss_pred CCCcCHHHHHHHHHHHh----CCCCCCcEEEEEEC--CCCCce-----eecC-----HHHHHHHHHHHHhcC
Confidence 44789999999988765 45777888776533 455555 5555 589999999998876
No 151
>PLN02952 phosphoinositide phospholipase C
Probab=24.78 E-value=1.3e+02 Score=32.75 Aligned_cols=55 Identities=18% Similarity=0.229 Sum_probs=39.7
Q ss_pred CCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHH
Q 020151 139 DEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVL 198 (330)
Q Consensus 139 ~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL 198 (330)
+.|+++.+|.+.+...+......||. .+..||.++..++ +.++.++|...+++.-
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~----ei~~lf~~~~~~~-~~mt~~~l~~FL~~~Q 67 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPD----DVKDVFCKFSVGG-GHMGADQLRRFLVLHQ 67 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChH----HHHHHHHHHhCCC-CccCHHHHHHHHHHhC
Confidence 46899999998666666433222333 3899999996644 6799999999987643
No 152
>COG5502 Uncharacterized conserved protein [Function unknown]
Probab=24.56 E-value=5e+02 Score=23.08 Aligned_cols=101 Identities=11% Similarity=0.194 Sum_probs=69.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhcccc
Q 020151 79 FDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVE 158 (330)
Q Consensus 79 vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~ 158 (330)
=|..++...++-+|..|.+.|-- .+...-..++-+.+..+|..=...+-+++++ -++.+|.+..-.
T Consensus 23 ~s~~~A~~~~~avL~tlRdrL~~-------------eea~~~aaqLP~~ir~~~~~~p~~~~~~~~~-s~~dFl~Rv~~~ 88 (135)
T COG5502 23 QSRNDAYRITRAVLRTLRDRLPG-------------EEAADFAAQLPMEIRDILVDGPDLGPPKLPF-SLDDFLTRVANK 88 (135)
T ss_pred CCHHHHHHHHHHHHHHHHHHcCh-------------hHHHHHHHhCCHHHHHHHhcCCcCCCCCCcc-cHHHHHHHHHHc
Confidence 36677888888899988888876 4444444455577888887632222233333 356688888888
Q ss_pred CCCCCCCChHH-HHHHHhhhccCCCcccCHHHHHHHHHHH
Q 020151 159 FGVPPFSEFPQ-LNDILKKHGAEGEEELGQAQFTELLRQV 197 (330)
Q Consensus 159 ~GlPP~~~~~v-~d~If~e~D~D~DG~Vs~eEF~~lmkkI 197 (330)
.|+.|.-+... ...||+-.... ||.+|+.++....
T Consensus 89 ~g~~~~vd~e~a~~AVf~vL~r~----Is~gei~~v~s~L 124 (135)
T COG5502 89 FGLEPPVDPEHAIAAVFAVLKRH----ISPGEIDKVRSRL 124 (135)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHh----CCHHHHHHHHHHC
Confidence 89988777664 66888887554 8999997765543
No 153
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=24.17 E-value=1.1e+02 Score=25.88 Aligned_cols=61 Identities=13% Similarity=0.298 Sum_probs=37.6
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhh----ccCCCcccCHHHHHHHHHHHH
Q 020151 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKH----GAEGEEELGQAQFTELLRQVL 198 (330)
Q Consensus 126 ~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~----D~D~DG~Vs~eEF~~lmkkIL 198 (330)
..|+..|.++-+ ||.|+++..-.|+ ||+ .+.+...++|.-. .. ....|+++|..+.-.+|.
T Consensus 30 ~~VE~RFd~La~--dG~L~rs~Fg~CI-------GM~--dSkeFA~eLFdALaRrr~i-~~~~I~k~eL~efW~qis 94 (100)
T PF08414_consen 30 KEVEKRFDKLAK--DGLLPRSDFGECI-------GMK--DSKEFAGELFDALARRRGI-KGDSITKDELKEFWEQIS 94 (100)
T ss_dssp HHHHHHHHHH-B--TTBEEGGGHHHHH-------T----S-HHHHHHHHHHHHHHTT---SSEE-HHHHHHHHHHHH
T ss_pred HHHHHHHHHhCc--CCcccHHHHHHhc-------CCc--ccHHHHHHHHHHHHHhcCC-ccCCcCHHHHHHHHHHhh
Confidence 348999999998 6999999988775 444 2234455555533 22 256789988877665543
No 154
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=23.71 E-value=3.7e+02 Score=23.08 Aligned_cols=86 Identities=13% Similarity=0.051 Sum_probs=55.0
Q ss_pred hHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCchhHHHHHHHHHhhc
Q 020151 56 NLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDPLVVCVLDGNMLKLFLGNEDDFTMLAENLFADL 135 (330)
Q Consensus 56 ~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede~~F~~~v~~~F~~L 135 (330)
..+.++|++..-... .+..++-.+....|.++-.+++..+...+ .| ... .=+.+-+.++.=++.-+
T Consensus 41 ~~v~~~f~~~~l~~~----~d~~l~v~~l~~~L~~iy~~l~~~~p~~~-~i--------~~~-~v~~a~~L~ln~Ll~vy 106 (127)
T PF09068_consen 41 SNVIEAFREHGLNQS----NDSSLSVSQLETLLSSIYEFLNKRLPTLH-QI--------PSR-PVDLAVDLLLNWLLNVY 106 (127)
T ss_dssp HHHHHHHHHTT---T-----TSEEEHHHHHHHHHHHHHHHHHHSTTS---H--------H------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcc----cCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CC--------Cch-hHHHHHHHHHHHHHHHh
Confidence 456677887555420 14569999999999999999998887721 00 000 00244556667778888
Q ss_pred CCCCCCcccHHHHHHHHhhc
Q 020151 136 DTEDEGKVCKGEIQNALGHM 155 (330)
Q Consensus 136 D~d~DG~LS~~ELr~AL~~l 155 (330)
|.+++|+|+.-.++.+|--+
T Consensus 107 D~~rtG~I~vls~KvaL~~L 126 (127)
T PF09068_consen 107 DSQRTGKIRVLSFKVALITL 126 (127)
T ss_dssp -TT--SEEEHHHHHHHHHHT
T ss_pred CCCCCCeeehhHHHHHHHHh
Confidence 99999999999999888654
No 155
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=23.53 E-value=89 Score=24.46 Aligned_cols=26 Identities=19% Similarity=0.217 Sum_probs=21.9
Q ss_pred HHHHHHHHhcCCCCCCCcccHHHHHhhh
Q 020151 240 QCREQLFRMMDTWDMVYLLTKSDFDDFI 267 (330)
Q Consensus 240 ~~l~~~F~~~d~d~~~G~isk~eLr~~l 267 (330)
..+.++||.+-.+ ++-||+++||..|
T Consensus 6 eqv~~aFr~lA~~--KpyVT~~dLr~~l 31 (69)
T PF08726_consen 6 EQVEEAFRALAGG--KPYVTEEDLRRSL 31 (69)
T ss_dssp HHHHHHHHHHCTS--SSCEEHHHHHHHS
T ss_pred HHHHHHHHHHHcC--CCcccHHHHHHHc
Confidence 4677899999555 5999999999988
No 156
>KOG3095 consensus Transcription initiation factor IIE, beta subunit [Transcription]
Probab=23.52 E-value=6.2e+02 Score=25.15 Aligned_cols=51 Identities=18% Similarity=0.162 Sum_probs=33.4
Q ss_pred cccccCCCCChhHHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHH-----HHHHHhCCCCeEEE
Q 020151 45 SSSLFGLSLPQNLKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYIT-----AIADELKDDPLVVC 107 (330)
Q Consensus 45 ~~~~fg~~lp~~l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~-----aiAd~L~~~PI~v~ 107 (330)
+.++|| .-..++-.++.+...+ ...+ |-..++..|.. ++-+.|+.+|=+..
T Consensus 70 ~~~~fg--t~~kiv~~~~~~h~~~------~~~P----E~i~E~~~~d~~~~n~~l~esLkkNpri~~ 125 (284)
T KOG3095|consen 70 SQSHFG--THAKIVIYLLTEHLRG------LTHP----EIIDELQHYDLKHKNWLLLESLKKNPRIEY 125 (284)
T ss_pred ccccch--hHHHHHHHHHHHHHhc------CCcH----HHHHHHHHHHhhhccHHHHHHHhhCCceEe
Confidence 345666 3345666677775444 2222 66677777777 78889999997766
No 157
>PF11061 DUF2862: Protein of unknown function (DUF2862); InterPro: IPR021291 This family of proteins has no known function.
Probab=23.38 E-value=53 Score=25.61 Aligned_cols=32 Identities=31% Similarity=0.519 Sum_probs=28.3
Q ss_pred HHHHHHHHHhccCceEEeccccccCCchhhHH
Q 020151 196 QVLQDIVDALADKHIIIIPNIKIIDGSKLRMV 227 (330)
Q Consensus 196 kIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~ 227 (330)
++...++..|+.+|+-++..-|+-||+++.-+
T Consensus 15 Ri~~~l~~~l~~~~~g~I~~fKmtDG~giG~v 46 (64)
T PF11061_consen 15 RIPKELVDKLGKNPIGTIKGFKMTDGSGIGVV 46 (64)
T ss_pred hccHHHHHHhccCCcEEEEEEEEecCCcEEEE
Confidence 56678999999999999999999999997653
No 158
>PF12767 SAGA-Tad1: Transcriptional regulator of RNA polII, SAGA, subunit; InterPro: IPR024738 The yeast Spt-Ada-Gcn5-Acetyl (SAGA) transferase complex is a multifunctional coactivator involved in multiple cellular processes [], including regulation of transcription by RNA polymerase II [, ]. It is formed of five major modular subunits and shows a high degree of structural conservation to human TFTC and STAGA []. This entry represents Ada1 (known as Tada1 in higher eukaryotes), one of the subunits that constitute the SAGA core. It also functions as a component of the SALSA and SLIK complexes. ; GO: 0070461 SAGA-type complex
Probab=22.92 E-value=1.4e+02 Score=28.21 Aligned_cols=50 Identities=18% Similarity=0.339 Sum_probs=38.5
Q ss_pred CCcccHHHHHHHHhh-ccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHH
Q 020151 140 EGKVCKGEIQNALGH-MGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQ 199 (330)
Q Consensus 140 DG~LS~~ELr~AL~~-lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~ 199 (330)
.+.+...+++..|.+ +|.+. ...|-+.++.| -.|++|++||-+++..+|.
T Consensus 6 ~~Ridl~~lk~~l~~~LG~~~-------~~~Y~~~l~~f---l~~klsk~Efd~~~~~~L~ 56 (252)
T PF12767_consen 6 NSRIDLEELKSQLQKRLGPDR-------WKKYFQSLKRF---LSGKLSKEEFDKECRRILG 56 (252)
T ss_pred ccccCHHHHHHHHHHHHChHH-------HHHHHHHHHHH---HHhccCHHHHHHHHHHHhC
Confidence 456777788888777 66431 33688999998 6689999999999998883
No 159
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.54 E-value=1.2e+02 Score=27.35 Aligned_cols=73 Identities=21% Similarity=0.342 Sum_probs=50.6
Q ss_pred hcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHH
Q 020151 118 LGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQV 197 (330)
Q Consensus 118 vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkI 197 (330)
.+||. ....+ -+|+-...| |..|..|.+....=+.-.+|+|+.+ ++.+++-...-+...+|+--|...|+.-
T Consensus 24 adDP~-lAa~~-Llf~Vm~AD--G~v~~~E~~a~r~il~~~f~i~~~~----l~ali~~~e~~~~Ea~d~y~fts~l~r~ 95 (148)
T COG4103 24 ADDPR-LAAAA-LLFHVMEAD--GTVSESEREAFRAILKENFGIDGEE----LDALIEAGEEAGYEAIDLYSFTSVLKRH 95 (148)
T ss_pred CCCHH-HHHHH-HHHHHHhcc--cCcCHHHHHHHHHHHHHHcCCCHHH----HHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 56776 55555 678888875 8899999984433344567998887 4666655544466678888888877754
Q ss_pred H
Q 020151 198 L 198 (330)
Q Consensus 198 L 198 (330)
|
T Consensus 96 L 96 (148)
T COG4103 96 L 96 (148)
T ss_pred c
Confidence 4
No 160
>PRK10954 periplasmic protein disulfide isomerase I; Provisional
Probab=22.41 E-value=4.4e+02 Score=23.73 Aligned_cols=72 Identities=11% Similarity=0.141 Sum_probs=38.7
Q ss_pred HHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHH-HHHHHHHHHhcc
Q 020151 129 ENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLR-QVLQDIVDALAD 207 (330)
Q Consensus 129 ~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmk-kIL~~~A~~L~~ 207 (330)
+.+|+.+-.+. +..+.+.|++++...|+ ++ ..++..++.. ++.+.++ ..-.+-..++.+
T Consensus 108 ~~lf~~i~~~~-~~~~~~~L~~~a~~~Gl----d~----~~f~~~l~s~-----------~~~~~v~~~~~~a~~~gI~g 167 (207)
T PRK10954 108 PPLFEGVQKTQ-TIQSAADIRDVFIKAGV----KG----EDYDAAWNSF-----------VVKSLVAQQEKAAADLQLRG 167 (207)
T ss_pred HHHHHHHHccC-CCCCHHHHHHHHHHcCC----CH----HHHHHHHhCh-----------HHHHHHHHHHHHHHHcCCCC
Confidence 44555554333 44678888887777554 32 2233333221 1222222 222344567889
Q ss_pred CceEEeccccccC
Q 020151 208 KHIIIIPNIKIID 220 (330)
Q Consensus 208 ~PV~va~~e~~~d 220 (330)
.|-+++-.....+
T Consensus 168 tPtfiInGky~v~ 180 (207)
T PRK10954 168 VPAMFVNGKYMVN 180 (207)
T ss_pred CCEEEECCEEEEc
Confidence 9999997555444
No 161
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=22.40 E-value=9.1e+02 Score=26.84 Aligned_cols=54 Identities=13% Similarity=0.206 Sum_probs=30.7
Q ss_pred hhhhhHHHhHHHHHHHHHhcCCCCCCCcccHHHHHhhhccccc-------eeccCCchhhh
Q 020151 230 MLSTKMKAQLQCREQLFRMMDTWDMVYLLTKSDFDDFIPMRRF-------YIEEGGRREIV 283 (330)
Q Consensus 230 ~l~~k~~~~~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~~~~-------~~~~~~~~~~~ 283 (330)
+++.-+......+.++-+++.++...-.--.+.++..|+..++ |.+..||.+|.
T Consensus 437 ~va~Ql~~~s~~l~~~a~e~~~~~~~~~~~e~~i~~~L~~~gi~v~~v~~~~~~~g~~~I~ 497 (764)
T TIGR02865 437 LVAEQLKGVAESVEDIAKEINLEIVFHQLLEEKIIRALNKNGIPYEDVLAYNTEGGNIDVE 497 (764)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHCCCeeEEEEEEEcCCCcEEEE
Confidence 5555555556666666666665531122233557777766666 34566666554
No 162
>PRK10598 lipoprotein; Provisional
Probab=22.23 E-value=99 Score=28.69 Aligned_cols=40 Identities=5% Similarity=0.089 Sum_probs=26.7
Q ss_pred cCHHHHHHHHHH----HHHHHHHHhccCceEEeccccccCCchh
Q 020151 185 LGQAQFTELLRQ----VLQDIVDALADKHIIIIPNIKIIDGSKL 224 (330)
Q Consensus 185 Vs~eEF~~lmkk----IL~~~A~~L~~~PV~va~~e~~~dGs~l 224 (330)
++.+.|...++. ++..++.-|..+||++..++|....+-+
T Consensus 123 v~Pe~~~~~l~~l~p~l~~~L~~~l~~~PVY~L~d~~~~~eal~ 166 (186)
T PRK10598 123 VQPEKMQTVMQTLLPYLNQSLRSYFNQQPAYVLREDKSKAEALA 166 (186)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHhccCCeEEECCCCCHHHHHH
Confidence 455666665555 6777778889999999975544333333
No 163
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=22.03 E-value=86 Score=27.66 Aligned_cols=57 Identities=9% Similarity=0.130 Sum_probs=33.6
Q ss_pred ccccHHHHHHHHHccccccccCCCCChhHHHHHHhhhcCCCCccc-ccccccCHHHHHHHHHHHHH
Q 020151 29 STVTGAQLLDFAENEASSSLFGLSLPQNLKSTALKHISGSDDDVT-FRIKEFDRDHASKLASDYIT 93 (330)
Q Consensus 29 G~LS~aEl~~l~~~~~~~~~fg~~lp~~l~~~~l~~~~~~~~~~~-~~~~~vd~eeF~~~lk~~l~ 93 (330)
+.||++|+.+|++.-.- ...-+.+++++|..++.-.. -..+.|+-+-|+.=|+-|++
T Consensus 6 ~~lsp~eF~qLq~y~ey--------s~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe 63 (138)
T PF14513_consen 6 VSLSPEEFAQLQKYSEY--------STKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLE 63 (138)
T ss_dssp S-S-HHHHHHHHHHHHH------------HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT
T ss_pred eccCHHHHHHHHHHHHH--------HHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHc
Confidence 78999999886654311 24567889999966630000 13569999999988888775
No 164
>PF08671 SinI: Anti-repressor SinI; InterPro: IPR010981 The SinR repressor is part of a group of Sin (sporulation inhibition) proteins in Bacillus subtilis that regulate the commitment to sporulation in response to extreme adversity []. SinR is a tetrameric repressor protein that binds to the promoters of genes essential for entry into sporulation and prevents their transcription. This repression is overcome through the activity of SinI, which disrupts the SinR tetramer through the formation of a SinI-SinR heterodimer, thereby allowing sporulation to proceed. The SinR structure consists of two domains: a dimerisation domain stabilised by a hydrophobic core, and a DNA-binding domain that is identical to domains of the bacteriophage 434 CI and Cro proteins that regulate prophage induction. The dimerisation domain is a four-helical bundle formed from two helices from the C-terminal residues of SinR and two helices from the central residues of SinI. These regions in SinR and SinI are similar in both structure and sequence. The interaction of SinR monomers to form tetramers is weaker than between SinR and SinI, since SinI can effectively disrupt SinR tetramers. This entry represents the dimerisation domain in both SinI and SinR proteins.; GO: 0005488 binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1B0N_A 2YAL_A.
Probab=22.02 E-value=52 Score=21.93 Aligned_cols=27 Identities=15% Similarity=0.261 Sum_probs=15.7
Q ss_pred HHHHHHHHHhcCCCCCCCcccHHHHHhhhcc
Q 020151 239 LQCREQLFRMMDTWDMVYLLTKSDFDDFIPM 269 (330)
Q Consensus 239 ~~~l~~~F~~~d~d~~~G~isk~eLr~~l~~ 269 (330)
+++|..+....-.-+ ||++++|.||..
T Consensus 2 D~EW~~Li~eA~~~G----ls~eeir~FL~~ 28 (30)
T PF08671_consen 2 DEEWVELIKEAKESG----LSKEEIREFLEF 28 (30)
T ss_dssp -HHHHHHHHHHHHTT------HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcC----CCHHHHHHHHHh
Confidence 355666555543322 799999999864
No 165
>KOG3631 consensus Alpha-parvin and related focal adhesion proteins [Cytoskeleton]
Probab=21.91 E-value=71 Score=31.79 Aligned_cols=88 Identities=17% Similarity=0.232 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEE-----EeCchhHHHhhcCchhHHHHHHHHHhhcCCCCCCcccHHHHHHHHhhcc
Q 020151 82 DHASKLASDYITAIADELKDDPLVVC-----VLDGNMLKLFLGNEDDFTMLAENLFADLDTEDEGKVCKGEIQNALGHMG 156 (330)
Q Consensus 82 eeF~~~lk~~l~aiAd~L~~~PI~v~-----v~DGS~L~~~vede~~F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lg 156 (330)
-.|.+..+-.+..|-+.|-...|+|- ..||.-|+++++.=.+..-.+.. ...+-.--+.-|...|+...
T Consensus 86 pK~~el~kvLi~WiN~~L~~erIvVr~LeEDlfDGqilqkL~ekL~~~klev~e------vtqse~~QkqKLq~Vleavn 159 (365)
T KOG3631|consen 86 PKFEELVKVLIDWINDVLVPERIVVRSLEEDLFDGQILQKLFEKLAALKLEVAE------VTQSEIGQKQKLQTVLEAVN 159 (365)
T ss_pred hhHHHHHHHHHHHHHHhhcchhhhHHhhHHhhhhhHHHHHHHHHHHhhhccchh------hhhhhHHHHHHHHHHHHHHH
Confidence 46889999999999999999999987 56888888876543322222222 11111223566788888888
Q ss_pred ccCCCCCCCChHHHHHHHh
Q 020151 157 VEFGVPPFSEFPQLNDILK 175 (330)
Q Consensus 157 v~~GlPP~~~~~v~d~If~ 175 (330)
..+++|+-+.-|-.+.|+.
T Consensus 160 r~L~~~~~q~kWsvdsIh~ 178 (365)
T KOG3631|consen 160 RSLQLPEWQAKWSVDSIHN 178 (365)
T ss_pred HHhcCchhhhccchhhhcc
Confidence 8889999999898888864
No 166
>PRK10236 hypothetical protein; Provisional
Probab=21.81 E-value=5.5e+02 Score=24.85 Aligned_cols=89 Identities=11% Similarity=0.101 Sum_probs=49.8
Q ss_pred hhHHHHHHhhhcCCCCcccccccccC-HHHHHH------HHHHHHHHHHHHhCCCCeEEEEeCchhHHHhhcCc-hhHHH
Q 020151 55 QNLKSTALKHISGSDDDVTFRIKEFD-RDHASK------LASDYITAIADELKDDPLVVCVLDGNMLKLFLGNE-DDFTM 126 (330)
Q Consensus 55 ~~l~~~~l~~~~~~~~~~~~~~~~vd-~eeF~~------~lk~~l~aiAd~L~~~PI~v~v~DGS~L~~~vede-~~F~~ 126 (330)
+.-+..+.+-+++|.|+..-..++++ +++|+. ..++|-+.||++|.. +-|.++..+++.+ ..|..
T Consensus 19 ~edL~~Lv~~Lt~d~dG~~R~te~lt~~~~yk~~~~~~~~~~~yw~~Ia~elq~-------fGgnt~~n~lRG~Gv~Yre 91 (237)
T PRK10236 19 EEQLANFARLLTHNEKGKTRLSSVLMRNELFKSMEGHPEQHRRNWQLIAGELQH-------FGGDSIANKLRGHGKLYRA 91 (237)
T ss_pred HHHHHHHHHHHhcCCCCCEeehhhhcccHHHHhhcccchhHHHHHHHHHHHHHH-------hcchHHHHHHhcCCccHHH
Confidence 34456666666666322111133443 335554 578899999999977 5555555444432 23455
Q ss_pred HHHHHHhhcCCCCCCcccHHHHHH
Q 020151 127 LAENLFADLDTEDEGKVCKGEIQN 150 (330)
Q Consensus 127 ~v~~~F~~LD~d~DG~LS~~ELr~ 150 (330)
.+..+=+.+..+-+.+.|..+|+.
T Consensus 92 IL~DVc~~LKV~y~~~~st~~iE~ 115 (237)
T PRK10236 92 ILLDVSKRLKLKADKEMSTFEIEQ 115 (237)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHH
Confidence 555555666666555555555553
No 167
>PF09987 DUF2226: Uncharacterized protein conserved in archaea (DUF2226); InterPro: IPR019249 This entry includes hypothetical proteins of unknown function.
Probab=21.71 E-value=3.6e+02 Score=26.83 Aligned_cols=77 Identities=18% Similarity=0.341 Sum_probs=47.4
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHH
Q 020151 124 FTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQFTELLRQVLQDIVD 203 (330)
Q Consensus 124 F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF~~lmkkIL~~~A~ 203 (330)
|.+.....+.++-.+.+ .|||+||-+ ++ |+.++.+.| ++++++.+=.-..-.+..++|.+...+++..+-.
T Consensus 160 ~gk~A~e~~eEii~E~~-slsReeLLK---kl----gIk~p~ee~-Ie~lle~~f~ps~~el~~~~~e~~~~~i~~~i~~ 230 (297)
T PF09987_consen 160 FGKSAKEEFEEIIKEEN-SLSREELLK---KL----GIKEPDEEE-IENLLEDYFEPSKEELIEEDLEEIKNKIIEKIKN 230 (297)
T ss_pred cchhHHHHHHHHhcCCc-cCCHHHHHH---Hh----CCCCCCHHH-HHHHHHHHHhhccccccchhHHHHHHHHHHHHHH
Confidence 44445556666655544 499999875 43 665555444 5777665533233335667777777777777776
Q ss_pred HhccCc
Q 020151 204 ALADKH 209 (330)
Q Consensus 204 ~L~~~P 209 (330)
.|.+.|
T Consensus 231 ~l~~~~ 236 (297)
T PF09987_consen 231 SLKNIL 236 (297)
T ss_pred HHhcCC
Confidence 666555
No 168
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=21.59 E-value=1.7e+02 Score=24.49 Aligned_cols=41 Identities=12% Similarity=0.170 Sum_probs=33.7
Q ss_pred HHHHHHhhhcCCCCcccccccccCHHHHHHHHHHHHHHHHHHhCCCC
Q 020151 57 LKSTALKHISGSDDDVTFRIKEFDRDHASKLASDYITAIADELKDDP 103 (330)
Q Consensus 57 l~~~~l~~~~~~~~~~~~~~~~vd~eeF~~~lk~~l~aiAd~L~~~P 103 (330)
....+.+++..- +-|..+.++..+..++.+.++++.|+.+|
T Consensus 37 ~r~~~~~~l~~~------G~gr~~~ee~~~~~~~~l~aLs~~Lg~~~ 77 (126)
T cd03211 37 KQREARRKLKAI------GWDDKTLDQVIEEVDQCCQALSQRLGTQP 77 (126)
T ss_pred HHHHHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHCCCC
Confidence 456666666555 56788999999999999999999999955
No 169
>PRK06464 phosphoenolpyruvate synthase; Validated
Probab=20.88 E-value=3.3e+02 Score=30.42 Aligned_cols=82 Identities=13% Similarity=0.192 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC----------chh---------------HHHhhcCc--hhHHHHHHHHH
Q 020151 80 DRDHASKLASDYITAIADELKDDPLVVCVLD----------GNM---------------LKLFLGNE--DDFTMLAENLF 132 (330)
Q Consensus 80 d~eeF~~~lk~~l~aiAd~L~~~PI~v~v~D----------GS~---------------L~~~vede--~~F~~~v~~~F 132 (330)
..++|.+++......++..+..+||+|-.+| |.+ +|-++..+ ..|...+..+.
T Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~pv~iRtlD~~~~~~~~l~Ggdk~~~~E~NP~LG~RGiR~~l~~p~~~lf~~qlraI~ 627 (795)
T PRK06464 548 PEEFYVDKLAEGIATVAAAFYPKPVIVRLSDFKSNEYANLIGGERYEPEEENPMLGFRGASRYLSESFREAFALECEAIK 627 (795)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeEEEEcCCCchhhhHHhccCCcCCCCCCCCccccchhhhcccCchHHHHHHHHHHHH
Confidence 3567778888889999999999999999999 543 34556677 78999999999
Q ss_pred hhcC-CCCCC-------cccHHHHHHHHhhccccCCCC
Q 020151 133 ADLD-TEDEG-------KVCKGEIQNALGHMGVEFGVP 162 (330)
Q Consensus 133 ~~LD-~d~DG-------~LS~~ELr~AL~~lgv~~GlP 162 (330)
+.+| ..-.| .-|.+|++.+...+.. .|++
T Consensus 628 rald~~G~~~~~ImvPmV~s~eEa~~~~~~~~~-~g~~ 664 (795)
T PRK06464 628 RVREEMGLTNVEVMIPFVRTVEEAEKVIELLAE-NGLK 664 (795)
T ss_pred HHHHhcCCCCeEEEecCCCCHHHHHHHHHHHHH-hCcc
Confidence 9888 33345 1278888876665432 3444
No 170
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=20.68 E-value=2.8e+02 Score=20.52 Aligned_cols=49 Identities=16% Similarity=0.236 Sum_probs=35.4
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhh
Q 020151 128 AENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKH 177 (330)
Q Consensus 128 v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~ 177 (330)
++.+++.++++...=||.+|...-+++.|.. -+|+......+..++++|
T Consensus 6 ~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N-~l~~~~~~s~~~~~~~~f 54 (69)
T PF00690_consen 6 VEEVLKRLNTSSSQGLSSEEVEERRKKYGPN-ELPEPKKKSLWRIFLKQF 54 (69)
T ss_dssp HHHHHHHHTTBTSSBBTHHHHHHHHHHHSSS-STTTTTSSSHHHHHHHHT
T ss_pred HHHHHHHHCcCCCCCCCHHHHHHHHHhcccc-cccccccCcHHHHHHHHH
Confidence 6778888886666668899999999998885 455544445566666655
No 171
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=20.57 E-value=1.2e+02 Score=33.15 Aligned_cols=58 Identities=21% Similarity=0.304 Sum_probs=44.7
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHhhhccCCCcccCHHHH
Q 020151 126 MLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILKKHGAEGEEELGQAQF 190 (330)
Q Consensus 126 ~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~e~D~D~DG~Vs~eEF 190 (330)
.++..+|..+|.+++|.|+-.++-.+|..+...- ..+.+.-+|+.+|.+++ ..+++|=
T Consensus 555 ~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~------~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 555 IFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGD------ALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhh------HHHHHHHHHhhccCCcc-ccccccc
Confidence 4678899999999999999999999999875420 11234556899999888 7777665
No 172
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=20.29 E-value=3.4e+02 Score=29.16 Aligned_cols=106 Identities=15% Similarity=0.138 Sum_probs=73.7
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHHHHHhhccccCCCCCCCChHHHHHHHh---hhc----c-CCCcccCHHHHHHHHH
Q 020151 124 FTMLAENLFADLDTEDEGKVCKGEIQNALGHMGVEFGVPPFSEFPQLNDILK---KHG----A-EGEEELGQAQFTELLR 195 (330)
Q Consensus 124 F~~~v~~~F~~LD~d~DG~LS~~ELr~AL~~lgv~~GlPP~~~~~v~d~If~---e~D----~-D~DG~Vs~eEF~~lmk 195 (330)
.+..-+-+|.-+-....++++..-+-.||.+.|.- .+++-+..+|+ .+| . -..+.++++.|++.+.
T Consensus 84 lerleDLLFyLiaegq~ekipihKFiTALkstGLr------tsDPRLk~mMd~mKd~dq~~~e~S~gw~LdKDlFKkcI~ 157 (622)
T KOG0506|consen 84 LERLEDLLFYLIAEGQSEKIPIHKFITALKSTGLR------TSDPRLKDMMDEMKDVDQEENESSSGWLLDKDLFKKCIF 157 (622)
T ss_pred hhhhhhhhhHHhhcCCcCcccHHHHHHHHHHcCCC------cCCchHHHHHHHHHHHHhhhcccccceeecHHHHHHhhc
Confidence 56666777887776667999999999999998763 12343444433 333 2 2445689999999887
Q ss_pred HHHHHHHHHhccCceEEeccccccCCchhhHHHHhhhhhHHHhHHHHHHHHHhcCCCCCCCc
Q 020151 196 QVLQDIVDALADKHIIIIPNIKIIDGSKLRMVSKMLSTKMKAQLQCREQLFRMMDTWDMVYL 257 (330)
Q Consensus 196 kIL~~~A~~L~~~PV~va~~e~~~dGs~l~~~~~~l~~k~~~~~~~l~~~F~~~d~d~~~G~ 257 (330)
.-+--+.+.|+.+=||-.- .+|-..+..+|+..-.-+ -|+
T Consensus 158 sSI~lvSqALrkqmVIPdw---------------------~~Fts~I~tIFEscke~s-eG~ 197 (622)
T KOG0506|consen 158 SSIVLVSQALRKQMVIPDW---------------------EEFTSHIDTIFESCKESS-EGK 197 (622)
T ss_pred cchhHHHHHHhcCccCCcH---------------------HHHHHHHHHHHHHHHhcC-Ccc
Confidence 6666666777776664443 556677888999987766 677
Done!