BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 020154
         (330 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q3UDW8|HGNAT_MOUSE Heparan-alpha-glucosaminide N-acetyltransferase OS=Mus musculus
           GN=Hgsnat PE=1 SV=2
          Length = 656

 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 124/280 (44%), Gaps = 44/280 (15%)

Query: 19  ISKSTSAPANEKLERDPLLPPSNSNSKQTRPQHQQRR-----LISLDVFRGLTVALMILV 73
           ISK+ ++   ++L    L  PS ++      Q + RR     L  +D FRGL + LM+ V
Sbjct: 219 ISKTIASRETDRLINSELGSPSRADPLSADYQPETRRSSANRLRCVDTFRGLALVLMVFV 278

Query: 74  DDVGGILPAINHSPWNGLTLADFVMPFFLFIVGVSLALTYKNF----PCKVVATRKAILR 129
           +  GG      HS WNGLT+AD V P+F+FI+G S+ L+  +       K+    K + R
Sbjct: 279 NYGGGKYWYFKHSSWNGLTVADLVFPWFVFIMGTSIFLSMTSILQRGCSKLKLLGKIVWR 338

Query: 130 ALNLFLLGIFLQGGFFHGINNLKYG---VDIAQIRWMGVLQRIAIAYLVAALCE--IWLK 184
           +  L  +G+         I N  Y    +   ++R  GVLQR+ + Y V A+ E   W  
Sbjct: 339 SFLLICIGVI--------IVNPNYCLGPLSWDKVRIPGVLQRLGVTYFVVAVLEFFFWKP 390

Query: 185 GDGHVSSKLSLFR-----KYRGHWVVALVLTTLYLLLLYGLYVPDWQYEFPVETSSSSPW 239
                + + S F           W+  L L +++L L + L VP         T    P 
Sbjct: 391 VPDSCTLESSCFSLRDITSSWPQWLTILTLESIWLALTFFLPVPG------CPTGYLGP- 443

Query: 240 IFNVTCGVRGSTG--PACN--AVGMIDRKILGIQHLYRKP 275
                 G  G  G  P C   A G IDR +LG  HLY+ P
Sbjct: 444 ------GGIGDLGKYPHCTGGAAGYIDRLLLGDNHLYQHP 477


>sp|Q68CP4|HGNAT_HUMAN Heparan-alpha-glucosaminide N-acetyltransferase OS=Homo sapiens
           GN=HGSNAT PE=1 SV=2
          Length = 663

 Score = 84.7 bits (208), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 123/282 (43%), Gaps = 46/282 (16%)

Query: 19  ISKSTSAPANEKLERDPLLPPSNSNSKQTRPQHQQRRLISL-------DVFRGLTVALMI 71
           ISK+ S+   ++L    L  PS ++      Q    RL +L       D FRG+ + LM+
Sbjct: 224 ISKAISSRETDRLINSELGSPSRTDPLDGDVQPATWRLSALPPRLRSVDTFRGIALILMV 283

Query: 72  LVDDVGGILPAINHSPWNGLTLADFVMPFFLFIVGVSLALTYKNF----PCKVVATRKAI 127
            V+  GG      H+ WNGLT+AD V P+F+FI+G S+ L+  +       K     K  
Sbjct: 284 FVNYGGGKYWYFKHASWNGLTVADLVFPWFVFIMGSSIFLSMTSILQRGCSKFRLLGKIA 343

Query: 128 LRALNLFLLGIFLQGGFFHGINNLKYG---VDIAQIRWMGVLQRIAIAYLVAALCEIWLK 184
            R+  L  +GI         I N  Y    +   ++R  GVLQR+ + Y V A+ E+   
Sbjct: 344 WRSFLLICIGII--------IVNPNYCLGPLSWDKVRIPGVLQRLGVTYFVVAVLELLFA 395

Query: 185 G--DGHVSSKLSLFR-----KYRGHWVVALVLTTLYLLLLYGLYVPDWQYEFPVETSSSS 237
                H +S+ S             W++ LVL  L+L L + L VP         T    
Sbjct: 396 KPVPEHCASERSCLSLRDITSSWPQWLLILVLEGLWLGLTFLLPVPG------CPTGYLG 449

Query: 238 PWIFNVTCGVRGSTG--PACN--AVGMIDRKILGIQHLYRKP 275
           P       G  G  G  P C   A G IDR +LG  HLY+ P
Sbjct: 450 P-------GGIGDFGKYPNCTGGAAGYIDRLLLGDDHLYQHP 484


>sp|Q8W9L2|CYB_HETGU Cytochrome b OS=Heteromys gaumeri GN=MT-CYB PE=3 SV=1
          Length = 379

 Score = 32.0 bits (71), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 2/101 (1%)

Query: 28  NEKLERDPLLPPSNSNSKQTRPQHQQRRLISLDVFRGLTVALMILVDDVGGILPAINHSP 87
           +E    +PL  PSN +   + P +  + L+ + +  GL +++++   D+ G     N++P
Sbjct: 201 HETGSNNPLGIPSNCDKIPSHPYYTFKELLGVIMLLGLYLSIVLFFPDLLG--DPDNYTP 258

Query: 88  WNGLTLADFVMPFFLFIVGVSLALTYKNFPCKVVATRKAIL 128
            N L     + P + F+   ++  +  N    V+A   +IL
Sbjct: 259 ANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSIL 299


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.327    0.141    0.442 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,766,735
Number of Sequences: 539616
Number of extensions: 4619916
Number of successful extensions: 13425
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 13413
Number of HSP's gapped (non-prelim): 14
length of query: 330
length of database: 191,569,459
effective HSP length: 118
effective length of query: 212
effective length of database: 127,894,771
effective search space: 27113691452
effective search space used: 27113691452
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)