Query 020156
Match_columns 330
No_of_seqs 312 out of 2828
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 07:28:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020156.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020156hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1838 Alpha/beta hydrolase [ 100.0 7.7E-55 1.7E-59 391.3 27.1 301 25-328 34-339 (409)
2 COG0429 Predicted hydrolase of 100.0 3.4E-52 7.3E-57 361.5 25.7 273 53-328 16-291 (345)
3 PLN02511 hydrolase 100.0 3.1E-48 6.7E-53 361.1 33.8 297 31-328 19-315 (388)
4 PRK10985 putative hydrolase; P 100.0 2.1E-41 4.5E-46 308.9 31.0 271 54-328 2-272 (324)
5 PLN02298 hydrolase, alpha/beta 99.9 1.5E-21 3.2E-26 178.7 18.1 137 82-224 30-170 (330)
6 PLN02385 hydrolase; alpha/beta 99.9 1.5E-21 3.3E-26 180.0 18.2 137 81-224 58-198 (349)
7 PHA02857 monoglyceride lipase; 99.9 5.9E-21 1.3E-25 170.2 19.6 129 88-224 4-133 (276)
8 PRK13604 luxD acyl transferase 99.9 1.2E-20 2.7E-25 166.9 17.8 134 85-226 10-144 (307)
9 COG2267 PldB Lysophospholipase 99.9 2.6E-20 5.7E-25 167.1 19.4 136 83-226 8-145 (298)
10 COG1647 Esterase/lipase [Gener 99.9 5.3E-22 1.1E-26 163.3 7.4 107 112-225 14-120 (243)
11 PRK10749 lysophospholipase L2; 99.9 3.6E-20 7.7E-25 169.6 20.2 144 67-224 18-167 (330)
12 PRK00870 haloalkane dehalogena 99.9 5.2E-21 1.1E-25 173.0 13.2 133 78-222 13-149 (302)
13 PRK03592 haloalkane dehalogena 99.9 1.5E-20 3.2E-25 169.3 16.0 121 85-223 8-128 (295)
14 PLN02824 hydrolase, alpha/beta 99.8 3.3E-20 7.2E-25 167.0 16.5 102 113-223 29-137 (294)
15 TIGR02240 PHA_depoly_arom poly 99.8 1.1E-20 2.3E-25 168.7 12.9 118 93-224 10-127 (276)
16 KOG1455 Lysophospholipase [Lip 99.8 8.6E-20 1.9E-24 157.6 14.8 139 81-225 24-166 (313)
17 TIGR03343 biphenyl_bphD 2-hydr 99.8 5.1E-19 1.1E-23 158.0 17.6 105 112-222 29-135 (282)
18 PLN02578 hydrolase 99.8 3.2E-19 6.9E-24 164.8 15.8 103 112-223 85-187 (354)
19 PLN02652 hydrolase; alpha/beta 99.8 4E-19 8.6E-24 165.5 16.3 134 85-224 111-246 (395)
20 PRK05077 frsA fermentation/res 99.8 2.3E-18 4.9E-23 161.6 21.3 133 83-224 167-301 (414)
21 PRK11126 2-succinyl-6-hydroxy- 99.8 3E-19 6.5E-24 155.8 13.8 101 113-224 2-103 (242)
22 PF12697 Abhydrolase_6: Alpha/ 99.8 2.2E-19 4.8E-24 153.2 12.5 103 116-227 1-105 (228)
23 TIGR02427 protocat_pcaD 3-oxoa 99.8 2.7E-19 5.9E-24 155.3 12.2 103 112-223 12-114 (251)
24 TIGR01607 PST-A Plasmodium sub 99.8 2.8E-19 6E-24 163.5 12.6 132 89-225 2-187 (332)
25 TIGR03056 bchO_mg_che_rel puta 99.8 5.6E-19 1.2E-23 156.9 13.9 104 112-224 27-131 (278)
26 TIGR01250 pro_imino_pep_2 prol 99.8 3.5E-18 7.6E-23 151.7 19.0 120 92-223 9-131 (288)
27 KOG4178 Soluble epoxide hydrol 99.8 5.6E-19 1.2E-23 154.8 13.0 116 97-224 32-149 (322)
28 TIGR03611 RutD pyrimidine util 99.8 4.6E-19 1E-23 155.0 11.6 104 112-224 12-116 (257)
29 PRK10349 carboxylesterase BioH 99.8 8.8E-19 1.9E-23 154.5 11.9 97 112-222 12-108 (256)
30 PRK06489 hypothetical protein; 99.8 1.7E-18 3.7E-23 160.3 14.1 103 113-222 69-188 (360)
31 PLN02679 hydrolase, alpha/beta 99.8 3.1E-18 6.7E-23 158.5 15.5 103 112-223 87-191 (360)
32 TIGR03695 menH_SHCHC 2-succiny 99.8 1.6E-18 3.5E-23 150.1 12.6 107 113-225 1-107 (251)
33 PRK10673 acyl-CoA esterase; Pr 99.8 2.5E-18 5.3E-23 151.2 13.8 101 111-221 14-114 (255)
34 TIGR01738 bioH putative pimelo 99.8 8.5E-19 1.8E-23 151.8 9.8 98 112-223 3-100 (245)
35 PLN02965 Probable pheophorbida 99.8 1.4E-18 3E-23 153.3 9.8 101 115-222 5-106 (255)
36 TIGR01249 pro_imino_pep_1 prol 99.8 2.6E-18 5.6E-23 155.6 11.6 124 85-223 5-130 (306)
37 PLN03087 BODYGUARD 1 domain co 99.8 3.4E-17 7.3E-22 154.9 18.1 106 112-224 200-310 (481)
38 PRK03204 haloalkane dehalogena 99.7 4.9E-17 1.1E-21 145.9 17.0 122 84-223 14-136 (286)
39 PRK14875 acetoin dehydrogenase 99.7 1.4E-17 3.1E-22 154.6 13.8 103 112-223 130-232 (371)
40 PLN03084 alpha/beta hydrolase 99.7 3.6E-17 7.8E-22 151.5 16.2 104 112-224 126-233 (383)
41 TIGR03101 hydr2_PEP hydrolase, 99.7 4.9E-17 1.1E-21 143.0 16.0 129 89-224 5-135 (266)
42 PRK07581 hypothetical protein; 99.7 9.9E-17 2.1E-21 147.4 17.4 109 112-224 40-160 (339)
43 TIGR01392 homoserO_Ac_trn homo 99.7 3.1E-17 6.8E-22 151.4 12.7 107 112-224 30-163 (351)
44 PRK05855 short chain dehydroge 99.7 1.4E-16 2.9E-21 156.6 17.8 124 87-222 5-130 (582)
45 PLN02872 triacylglycerol lipas 99.7 1.6E-17 3.5E-22 154.2 10.2 157 65-224 26-198 (395)
46 TIGR00976 /NonD putative hydro 99.7 2.5E-17 5.4E-22 160.5 11.7 133 89-227 1-136 (550)
47 PLN02894 hydrolase, alpha/beta 99.7 2E-15 4.3E-20 141.5 22.7 106 112-223 104-211 (402)
48 PRK08775 homoserine O-acetyltr 99.7 1.1E-16 2.4E-21 147.3 13.9 102 115-224 59-174 (343)
49 PRK00175 metX homoserine O-ace 99.7 1.8E-16 3.9E-21 147.7 14.8 107 112-224 47-183 (379)
50 TIGR03100 hydr1_PEP hydrolase, 99.7 1.3E-15 2.8E-20 135.8 19.7 124 92-224 9-135 (274)
51 KOG4409 Predicted hydrolase/ac 99.7 7.2E-16 1.6E-20 135.8 17.2 146 68-223 50-195 (365)
52 PRK10566 esterase; Provisional 99.7 1.1E-15 2.3E-20 134.2 17.3 105 112-221 26-139 (249)
53 KOG1552 Predicted alpha/beta h 99.7 4.7E-16 1E-20 132.0 11.8 121 88-221 39-161 (258)
54 KOG1454 Predicted hydrolase/ac 99.7 2.5E-16 5.5E-21 142.8 10.0 134 85-225 26-168 (326)
55 TIGR01836 PHA_synth_III_C poly 99.7 1.1E-15 2.3E-20 141.1 13.4 111 112-227 61-175 (350)
56 COG1506 DAP2 Dipeptidyl aminop 99.7 1.3E-15 2.9E-20 150.0 14.9 201 79-327 360-567 (620)
57 KOG4391 Predicted alpha/beta h 99.6 1.5E-15 3.3E-20 124.6 11.3 130 80-220 50-181 (300)
58 PLN02211 methyl indole-3-aceta 99.6 2.4E-15 5.2E-20 133.9 11.1 104 112-222 17-121 (273)
59 PF12695 Abhydrolase_5: Alpha/ 99.6 1.1E-14 2.3E-19 116.7 13.5 92 115-221 1-93 (145)
60 KOG2984 Predicted hydrolase [G 99.6 5E-16 1.1E-20 126.1 5.4 109 113-225 42-151 (277)
61 PLN02980 2-oxoglutarate decarb 99.6 2.5E-14 5.5E-19 153.7 19.8 102 112-222 1370-1479(1655)
62 PF00561 Abhydrolase_1: alpha/ 99.6 4.4E-15 9.6E-20 127.8 10.7 78 143-222 1-78 (230)
63 PF06500 DUF1100: Alpha/beta h 99.6 2.1E-14 4.4E-19 131.3 14.8 136 82-228 163-301 (411)
64 PF02129 Peptidase_S15: X-Pro 99.6 8E-15 1.7E-19 130.6 10.5 131 93-227 1-140 (272)
65 TIGR01840 esterase_phb esteras 99.6 2E-13 4.3E-18 117.0 16.0 110 111-223 11-130 (212)
66 PRK11071 esterase YqiA; Provis 99.5 6.7E-14 1.5E-18 117.7 12.4 91 114-224 2-94 (190)
67 PRK10115 protease 2; Provision 99.5 1.2E-13 2.5E-18 137.4 15.6 198 83-327 415-622 (686)
68 TIGR01838 PHA_synth_I poly(R)- 99.5 2.1E-13 4.5E-18 130.5 14.8 111 112-227 187-306 (532)
69 PRK06765 homoserine O-acetyltr 99.5 3.9E-13 8.4E-18 125.0 15.3 107 112-224 55-197 (389)
70 KOG4667 Predicted esterase [Li 99.5 7.7E-13 1.7E-17 108.8 13.6 111 112-226 32-142 (269)
71 TIGR03230 lipo_lipase lipoprot 99.5 5.4E-13 1.2E-17 124.3 13.6 109 112-222 40-153 (442)
72 cd00707 Pancreat_lipase_like P 99.5 2.5E-13 5.5E-18 120.8 10.5 110 112-223 35-147 (275)
73 PLN02442 S-formylglutathione h 99.5 2.1E-12 4.5E-17 115.6 16.0 128 94-225 29-180 (283)
74 KOG2564 Predicted acetyltransf 99.5 1.4E-12 3E-17 111.3 13.0 105 112-220 73-179 (343)
75 COG2945 Predicted hydrolase of 99.4 2.9E-12 6.3E-17 103.9 13.4 109 111-224 26-138 (210)
76 COG2936 Predicted acyl esteras 99.4 5.6E-13 1.2E-17 125.9 10.5 142 82-229 17-165 (563)
77 KOG2382 Predicted alpha/beta h 99.4 4.9E-13 1.1E-17 117.6 8.6 106 112-222 51-158 (315)
78 PF00326 Peptidase_S9: Prolyl 99.4 5.5E-13 1.2E-17 114.3 8.1 92 133-226 5-102 (213)
79 PF06342 DUF1057: Alpha/beta h 99.4 8.9E-12 1.9E-16 107.5 15.2 126 89-223 11-137 (297)
80 PRK07868 acyl-CoA synthetase; 99.4 9.8E-12 2.1E-16 129.2 16.9 107 111-226 65-180 (994)
81 TIGR01839 PHA_synth_II poly(R) 99.3 1.1E-11 2.4E-16 117.7 12.0 108 112-227 214-332 (560)
82 COG4757 Predicted alpha/beta h 99.3 3.3E-12 7.2E-17 106.2 7.2 114 88-208 9-126 (281)
83 PRK11460 putative hydrolase; P 99.3 7E-11 1.5E-15 102.6 14.7 105 112-220 15-135 (232)
84 KOG2624 Triglyceride lipase-ch 99.3 5.1E-11 1.1E-15 109.8 14.3 138 82-223 46-199 (403)
85 PF05448 AXE1: Acetyl xylan es 99.3 5.6E-11 1.2E-15 107.6 14.1 132 84-223 56-209 (320)
86 COG0412 Dienelactone hydrolase 99.3 1.7E-10 3.8E-15 100.1 16.1 127 87-222 5-145 (236)
87 PF01738 DLH: Dienelactone hyd 99.3 6E-11 1.3E-15 102.1 11.8 105 112-221 13-130 (218)
88 COG0596 MhpC Predicted hydrola 99.3 4.1E-11 8.9E-16 103.5 10.9 102 113-224 21-124 (282)
89 PLN00021 chlorophyllase 99.2 1.1E-10 2.5E-15 105.4 13.3 116 96-223 38-166 (313)
90 PRK05371 x-prolyl-dipeptidyl a 99.2 9.5E-11 2.1E-15 117.5 14.1 90 133-225 270-375 (767)
91 TIGR03502 lipase_Pla1_cef extr 99.2 5.4E-11 1.2E-15 117.6 11.7 95 112-208 448-577 (792)
92 COG3458 Acetyl esterase (deace 99.2 3.2E-11 6.9E-16 102.8 8.7 130 86-223 58-210 (321)
93 TIGR02821 fghA_ester_D S-formy 99.2 1.3E-09 2.7E-14 97.3 16.1 129 94-225 24-175 (275)
94 PF12146 Hydrolase_4: Putative 99.2 1.3E-10 2.9E-15 82.8 7.5 64 112-177 15-79 (79)
95 COG3571 Predicted hydrolase of 99.1 1.1E-09 2.5E-14 86.1 12.5 110 113-224 14-125 (213)
96 PF08538 DUF1749: Protein of u 99.1 8.3E-10 1.8E-14 97.3 13.0 121 95-226 19-151 (303)
97 PRK10162 acetyl esterase; Prov 99.1 2.1E-09 4.6E-14 97.8 15.5 127 85-225 58-197 (318)
98 COG2021 MET2 Homoserine acetyl 99.1 1.8E-09 4E-14 96.7 14.0 114 112-227 50-186 (368)
99 TIGR01849 PHB_depoly_PhaZ poly 99.1 6.5E-09 1.4E-13 96.2 15.8 109 113-228 102-213 (406)
100 PF02273 Acyl_transf_2: Acyl t 99.0 4.8E-09 1E-13 88.4 12.2 132 86-225 4-136 (294)
101 PF07819 PGAP1: PGAP1-like pro 99.0 4.1E-09 8.9E-14 90.8 11.7 108 112-224 3-124 (225)
102 COG0657 Aes Esterase/lipase [L 99.0 1.8E-08 3.9E-13 91.6 14.9 130 90-227 57-195 (312)
103 KOG2931 Differentiation-relate 99.0 1.6E-07 3.6E-12 81.3 19.5 127 84-223 22-157 (326)
104 PF02230 Abhydrolase_2: Phosph 98.9 1.1E-08 2.3E-13 88.0 11.8 109 111-223 12-140 (216)
105 KOG2100 Dipeptidyl aminopeptid 98.9 1.8E-08 3.9E-13 101.1 14.7 137 87-225 501-646 (755)
106 PF05677 DUF818: Chlamydia CHL 98.9 1.6E-07 3.5E-12 83.4 18.3 134 68-209 92-238 (365)
107 PF07859 Abhydrolase_3: alpha/ 98.9 3.6E-09 7.8E-14 90.3 7.9 102 116-225 1-112 (211)
108 PF12715 Abhydrolase_7: Abhydr 98.9 2E-08 4.3E-13 90.9 11.0 127 91-222 95-259 (390)
109 PF10230 DUF2305: Uncharacteri 98.8 4.7E-08 1E-12 86.6 11.6 109 113-223 2-122 (266)
110 PF01674 Lipase_2: Lipase (cla 98.8 4E-09 8.6E-14 89.9 4.3 90 115-206 3-95 (219)
111 PF12740 Chlorophyllase2: Chlo 98.8 8E-08 1.7E-12 83.3 11.4 103 112-223 16-131 (259)
112 PF03096 Ndr: Ndr family; Int 98.8 6.1E-08 1.3E-12 84.8 10.5 126 87-224 2-135 (283)
113 PF00151 Lipase: Lipase; Inte 98.8 7E-09 1.5E-13 94.3 4.7 114 110-223 68-187 (331)
114 KOG1553 Predicted alpha/beta h 98.8 3.8E-08 8.2E-13 86.7 8.8 131 83-224 213-345 (517)
115 COG3243 PhaC Poly(3-hydroxyalk 98.7 4.2E-08 9.2E-13 89.2 9.2 112 112-227 106-221 (445)
116 PF00975 Thioesterase: Thioest 98.7 1E-07 2.3E-12 82.3 11.2 103 114-223 1-104 (229)
117 PF05728 UPF0227: Uncharacteri 98.7 3.2E-07 6.9E-12 76.5 13.5 91 116-226 2-94 (187)
118 PLN02733 phosphatidylcholine-s 98.7 5.4E-08 1.2E-12 91.5 9.1 96 128-226 107-204 (440)
119 PF03583 LIP: Secretory lipase 98.7 4.2E-07 9.2E-12 81.5 14.4 99 130-233 14-123 (290)
120 PF10503 Esterase_phd: Esteras 98.7 3.6E-07 7.8E-12 78.1 12.7 108 112-222 15-131 (220)
121 COG3208 GrsT Predicted thioest 98.7 3.4E-08 7.3E-13 83.9 6.3 103 112-220 6-109 (244)
122 KOG2281 Dipeptidyl aminopeptid 98.7 2E-07 4.3E-12 88.3 11.7 130 89-222 618-761 (867)
123 KOG3043 Predicted hydrolase re 98.7 6.6E-08 1.4E-12 80.7 7.5 107 112-222 38-153 (242)
124 PF06821 Ser_hydrolase: Serine 98.7 3.8E-08 8.3E-13 81.1 5.9 90 116-223 1-91 (171)
125 PF06028 DUF915: Alpha/beta hy 98.7 7.5E-08 1.6E-12 84.1 8.0 113 112-226 10-146 (255)
126 COG3509 LpqC Poly(3-hydroxybut 98.7 3.6E-07 7.7E-12 79.6 12.0 125 93-223 43-179 (312)
127 COG0400 Predicted esterase [Ge 98.6 6.6E-07 1.4E-11 75.7 10.8 106 111-223 16-134 (207)
128 PF09752 DUF2048: Uncharacteri 98.5 2.4E-06 5.1E-11 76.8 14.0 104 111-220 90-207 (348)
129 KOG1515 Arylacetamide deacetyl 98.5 5.2E-06 1.1E-10 75.3 14.5 130 89-225 66-209 (336)
130 PF07224 Chlorophyllase: Chlor 98.4 1.3E-06 2.7E-11 74.8 9.4 103 112-223 45-157 (307)
131 PF00756 Esterase: Putative es 98.4 7.8E-07 1.7E-11 78.0 8.6 129 95-225 6-152 (251)
132 PF03403 PAF-AH_p_II: Platelet 98.4 8.9E-07 1.9E-11 82.2 8.2 108 111-223 98-262 (379)
133 KOG4627 Kynurenine formamidase 98.4 1E-06 2.2E-11 72.6 7.4 126 87-226 46-175 (270)
134 COG4814 Uncharacterized protei 98.4 2.4E-06 5.3E-11 72.6 9.4 109 114-224 46-177 (288)
135 PF05990 DUF900: Alpha/beta hy 98.4 4E-06 8.7E-11 72.7 10.8 113 112-225 17-139 (233)
136 PF11339 DUF3141: Protein of u 98.3 4.1E-05 8.8E-10 71.8 17.0 105 112-227 68-179 (581)
137 COG4099 Predicted peptidase [G 98.3 1.4E-05 3.1E-10 69.5 12.8 126 92-225 169-306 (387)
138 COG3319 Thioesterase domains o 98.3 4.6E-06 1E-10 72.8 9.9 103 114-224 1-104 (257)
139 PTZ00472 serine carboxypeptida 98.3 2.5E-05 5.4E-10 74.6 14.6 119 85-207 48-192 (462)
140 COG1770 PtrB Protease II [Amin 98.3 6.2E-06 1.3E-10 79.0 10.2 138 85-224 420-563 (682)
141 KOG2565 Predicted hydrolases o 98.2 8.3E-06 1.8E-10 73.0 10.0 116 93-215 132-256 (469)
142 PF05577 Peptidase_S28: Serine 98.2 1.3E-05 2.8E-10 76.3 11.7 129 93-225 10-150 (434)
143 COG3545 Predicted esterase of 98.2 5.1E-06 1.1E-10 67.1 7.4 92 114-223 3-94 (181)
144 PF05057 DUF676: Putative seri 98.2 4.7E-06 1E-10 71.6 7.7 109 112-223 3-125 (217)
145 PRK10439 enterobactin/ferric e 98.2 2.8E-05 6.1E-10 73.1 13.3 124 94-223 191-323 (411)
146 PF06057 VirJ: Bacterial virul 98.2 4.4E-06 9.4E-11 68.8 6.9 101 115-222 4-106 (192)
147 PF03959 FSH1: Serine hydrolas 98.2 5.6E-06 1.2E-10 70.8 7.7 108 112-223 3-145 (212)
148 COG4188 Predicted dienelactone 98.2 7.5E-06 1.6E-10 73.9 8.3 96 112-209 70-182 (365)
149 cd00312 Esterase_lipase Estera 98.2 9.3E-06 2E-10 78.5 9.7 124 95-224 77-214 (493)
150 PRK10252 entF enterobactin syn 98.2 1E-05 2.3E-10 87.1 10.6 100 112-221 1067-1169(1296)
151 COG2272 PnbA Carboxylesterase 98.1 2.4E-05 5.2E-10 73.1 10.5 126 96-224 79-218 (491)
152 KOG2237 Predicted serine prote 98.1 4.9E-06 1.1E-10 79.3 5.2 140 84-225 441-586 (712)
153 PF00135 COesterase: Carboxyle 98.0 2.3E-05 4.9E-10 76.4 9.0 125 95-222 107-244 (535)
154 KOG3847 Phospholipase A2 (plat 98.0 1.8E-05 4E-10 69.3 6.8 106 111-221 116-273 (399)
155 COG1075 LipA Predicted acetylt 98.0 2.9E-05 6.4E-10 71.1 8.2 104 113-224 59-165 (336)
156 KOG3975 Uncharacterized conser 97.9 0.00033 7.2E-09 59.7 13.4 110 111-222 27-146 (301)
157 PF12048 DUF3530: Protein of u 97.9 0.00091 2E-08 60.5 17.0 115 111-227 85-233 (310)
158 PRK04940 hypothetical protein; 97.8 0.00021 4.6E-09 58.7 9.9 38 186-228 60-97 (180)
159 COG4782 Uncharacterized protei 97.8 0.00018 3.9E-09 64.7 10.2 113 111-224 114-235 (377)
160 PF02450 LCAT: Lecithin:choles 97.8 8.2E-05 1.8E-09 69.6 8.1 86 130-224 66-161 (389)
161 KOG3724 Negative regulator of 97.7 0.00021 4.5E-09 70.0 10.1 109 110-223 86-220 (973)
162 KOG3101 Esterase D [General fu 97.7 5.8E-05 1.3E-09 62.6 5.2 132 95-228 26-184 (283)
163 PF08840 BAAT_C: BAAT / Acyl-C 97.7 2.5E-05 5.5E-10 66.8 3.3 52 170-224 4-57 (213)
164 PLN02606 palmitoyl-protein thi 97.7 0.00099 2.2E-08 59.1 13.0 104 114-224 27-133 (306)
165 KOG3967 Uncharacterized conser 97.7 0.00047 1E-08 57.4 10.2 113 112-224 100-228 (297)
166 smart00824 PKS_TE Thioesterase 97.6 0.00098 2.1E-08 56.0 11.7 85 131-221 15-100 (212)
167 PF10340 DUF2424: Protein of u 97.6 0.0015 3.2E-08 59.9 12.9 112 110-225 119-237 (374)
168 KOG4840 Predicted hydrolases o 97.5 0.00048 1E-08 57.7 8.2 112 112-226 35-147 (299)
169 cd00741 Lipase Lipase. Lipase 97.4 0.00043 9.4E-09 55.9 6.9 56 169-224 11-68 (153)
170 PF00450 Peptidase_S10: Serine 97.3 0.0022 4.8E-08 60.5 11.1 138 85-226 12-184 (415)
171 PF06259 Abhydrolase_8: Alpha/ 97.3 0.012 2.7E-07 48.5 13.5 109 112-223 18-144 (177)
172 KOG2183 Prolylcarboxypeptidase 97.3 0.0022 4.7E-08 58.7 9.6 105 114-223 81-202 (492)
173 COG3150 Predicted esterase [Ge 97.2 0.0025 5.3E-08 51.2 8.5 93 116-226 2-94 (191)
174 PF11144 DUF2920: Protein of u 97.2 0.0064 1.4E-07 56.1 12.2 45 171-217 165-213 (403)
175 PF01764 Lipase_3: Lipase (cla 97.2 0.0012 2.6E-08 52.2 6.7 56 168-223 46-105 (140)
176 PLN02633 palmitoyl protein thi 97.2 0.0035 7.5E-08 55.8 9.9 104 113-223 25-131 (314)
177 KOG3253 Predicted alpha/beta h 97.2 0.00045 9.7E-09 65.8 4.5 106 112-225 175-288 (784)
178 COG1505 Serine proteases of th 97.1 0.00044 9.5E-09 66.0 4.1 135 87-225 397-537 (648)
179 KOG2541 Palmitoyl protein thio 97.1 0.0036 7.8E-08 54.1 9.0 102 114-223 24-128 (296)
180 cd00519 Lipase_3 Lipase (class 97.0 0.0019 4.1E-08 55.8 6.4 55 169-223 111-167 (229)
181 PF05576 Peptidase_S37: PS-10 97.0 0.0033 7.2E-08 57.7 7.9 108 111-225 61-171 (448)
182 KOG2551 Phospholipase/carboxyh 96.9 0.026 5.6E-07 47.6 12.2 36 168-205 88-123 (230)
183 KOG2182 Hydrolytic enzymes of 96.9 0.018 3.9E-07 54.2 12.0 110 112-224 85-208 (514)
184 PF04083 Abhydro_lipase: Parti 96.8 0.0034 7.4E-08 42.3 5.1 47 82-128 10-58 (63)
185 COG2819 Predicted hydrolase of 96.8 0.052 1.1E-06 47.3 13.7 53 169-223 117-172 (264)
186 PLN02517 phosphatidylcholine-s 96.8 0.002 4.3E-08 62.0 5.4 89 131-224 158-264 (642)
187 PF11187 DUF2974: Protein of u 96.7 0.0046 1E-07 53.2 6.4 53 170-223 69-123 (224)
188 PF01083 Cutinase: Cutinase; 96.7 0.0035 7.6E-08 52.0 5.5 80 143-224 40-123 (179)
189 KOG2369 Lecithin:cholesterol a 96.7 0.0015 3.3E-08 60.8 3.6 91 129-224 124-226 (473)
190 PLN02454 triacylglycerol lipas 96.6 0.0069 1.5E-07 56.3 7.5 41 167-207 207-249 (414)
191 KOG1282 Serine carboxypeptidas 96.6 0.031 6.7E-07 52.9 11.6 118 84-206 44-188 (454)
192 PF05705 DUF829: Eukaryotic pr 96.5 0.16 3.5E-06 44.1 14.8 103 115-224 1-113 (240)
193 COG0627 Predicted esterase [Ge 96.4 0.0093 2E-07 54.0 6.7 113 112-226 53-190 (316)
194 PF02089 Palm_thioest: Palmito 96.3 0.0048 1E-07 54.4 4.4 107 112-223 4-116 (279)
195 PLN02209 serine carboxypeptida 96.3 0.069 1.5E-06 50.7 12.3 118 85-206 40-187 (437)
196 PF07082 DUF1350: Protein of u 96.3 0.044 9.4E-07 47.3 9.8 81 129-220 34-122 (250)
197 PLN03016 sinapoylglucose-malat 96.3 0.054 1.2E-06 51.4 11.5 119 86-206 39-185 (433)
198 PF11288 DUF3089: Protein of u 96.3 0.0092 2E-07 50.3 5.6 84 140-223 43-136 (207)
199 PLN02162 triacylglycerol lipas 96.2 0.015 3.2E-07 54.7 7.0 54 170-223 262-321 (475)
200 PLN00413 triacylglycerol lipas 96.2 0.014 3E-07 55.0 6.8 53 171-223 269-327 (479)
201 COG2382 Fes Enterochelin ester 96.2 0.014 3E-07 51.6 6.3 111 108-224 93-213 (299)
202 COG3946 VirJ Type IV secretory 96.2 0.018 4E-07 52.7 7.2 89 114-209 261-349 (456)
203 KOG1516 Carboxylesterase and r 96.1 0.046 1E-06 53.7 10.3 124 96-222 96-231 (545)
204 PF04301 DUF452: Protein of un 96.0 0.058 1.3E-06 45.8 9.1 80 112-223 10-90 (213)
205 KOG4540 Putative lipase essent 96.0 0.017 3.6E-07 50.5 5.8 54 167-225 257-310 (425)
206 COG5153 CVT17 Putative lipase 96.0 0.017 3.6E-07 50.5 5.8 54 167-225 257-310 (425)
207 KOG2112 Lysophospholipase [Lip 95.7 0.044 9.5E-07 45.8 7.1 35 184-220 91-125 (206)
208 PLN02934 triacylglycerol lipas 95.7 0.035 7.6E-07 52.8 7.3 36 170-205 305-340 (515)
209 KOG4372 Predicted alpha/beta h 95.7 0.023 5E-07 52.2 5.7 90 112-206 79-170 (405)
210 PLN02571 triacylglycerol lipas 95.6 0.023 5.1E-07 52.9 5.7 40 168-207 206-247 (413)
211 PLN02408 phospholipase A1 95.6 0.027 5.8E-07 51.7 5.9 55 168-222 180-239 (365)
212 COG2939 Carboxypeptidase C (ca 95.5 0.094 2E-06 49.7 9.3 98 109-209 97-221 (498)
213 COG1073 Hydrolases of the alph 95.3 0.052 1.1E-06 48.0 6.8 94 112-208 48-154 (299)
214 PLN02324 triacylglycerol lipas 95.2 0.04 8.6E-07 51.3 5.8 41 167-207 194-236 (415)
215 PLN02719 triacylglycerol lipas 94.9 0.053 1.1E-06 51.6 5.8 40 168-207 275-319 (518)
216 PLN02310 triacylglycerol lipas 94.5 0.074 1.6E-06 49.5 5.6 54 169-223 188-248 (405)
217 KOG4388 Hormone-sensitive lipa 94.4 0.16 3.4E-06 48.9 7.4 102 111-223 394-508 (880)
218 PLN02847 triacylglycerol lipas 94.4 0.12 2.5E-06 50.2 6.6 36 171-206 236-271 (633)
219 PLN02761 lipase class 3 family 94.4 0.09 2E-06 50.2 5.9 39 168-206 270-314 (527)
220 KOG4569 Predicted lipase [Lipi 94.3 0.074 1.6E-06 48.8 5.1 59 164-222 149-211 (336)
221 PLN02802 triacylglycerol lipas 94.3 0.071 1.5E-06 50.8 5.0 39 170-208 312-352 (509)
222 PLN02753 triacylglycerol lipas 94.3 0.09 2E-06 50.3 5.7 39 168-206 289-332 (531)
223 KOG1551 Uncharacterized conser 94.0 0.14 3E-06 44.5 5.7 108 95-210 100-219 (371)
224 PF10142 PhoPQ_related: PhoPQ- 93.4 0.25 5.4E-06 45.7 6.8 35 185-222 171-205 (367)
225 PLN03037 lipase class 3 family 93.2 0.11 2.4E-06 49.6 4.2 38 170-207 298-339 (525)
226 PLN02213 sinapoylglucose-malat 92.7 0.44 9.5E-06 43.4 7.3 63 144-206 3-71 (319)
227 COG4947 Uncharacterized protei 91.4 0.47 1E-05 38.5 5.2 51 173-226 88-139 (227)
228 PF08237 PE-PPE: PE-PPE domain 90.9 2 4.4E-05 36.9 9.0 83 142-225 2-91 (225)
229 PF03283 PAE: Pectinacetyleste 90.4 0.96 2.1E-05 41.9 7.1 36 170-205 138-175 (361)
230 PF05277 DUF726: Protein of un 89.6 0.99 2.2E-05 41.4 6.4 44 183-226 217-263 (345)
231 COG0529 CysC Adenylylsulfate k 89.6 3.3 7.2E-05 34.1 8.6 39 112-150 21-59 (197)
232 COG3673 Uncharacterized conser 89.2 3.4 7.4E-05 37.2 9.1 98 111-208 29-144 (423)
233 PF07519 Tannase: Tannase and 87.9 1.9 4E-05 41.6 7.3 89 136-227 53-154 (474)
234 PF09994 DUF2235: Uncharacteri 87.3 4.1 8.9E-05 36.3 8.7 95 114-208 2-114 (277)
235 KOG1202 Animal-type fatty acid 85.7 4.6 0.0001 42.7 8.8 97 111-223 2121-2219(2376)
236 PF06309 Torsin: Torsin; Inte 84.9 1.8 4E-05 33.5 4.4 32 111-143 50-82 (127)
237 TIGR03712 acc_sec_asp2 accesso 84.5 4.9 0.00011 38.3 7.9 112 94-223 275-389 (511)
238 PF06441 EHN: Epoxide hydrolas 81.1 3.3 7.1E-05 31.4 4.5 32 93-128 76-107 (112)
239 PF01583 APS_kinase: Adenylyls 81.0 4.4 9.6E-05 32.7 5.5 39 113-151 1-39 (156)
240 COG4822 CbiK Cobalamin biosynt 73.2 19 0.00042 30.5 7.2 55 111-182 136-191 (265)
241 KOG1532 GTPase XAB1, interacts 72.8 28 0.00061 31.0 8.3 39 112-150 17-55 (366)
242 KOG1283 Serine carboxypeptidas 72.6 22 0.00047 32.3 7.8 97 110-207 28-143 (414)
243 cd01841 NnaC_like NnaC (CMP-Ne 71.8 27 0.00059 28.0 8.1 76 114-193 23-98 (174)
244 KOG2385 Uncharacterized conser 71.6 8.3 0.00018 37.0 5.2 45 183-227 444-491 (633)
245 PF10081 Abhydrolase_9: Alpha/ 70.8 38 0.00082 30.2 8.8 87 133-224 52-148 (289)
246 KOG2029 Uncharacterized conser 70.4 4.1 9E-05 39.7 3.1 54 170-223 508-572 (697)
247 COG4553 DepA Poly-beta-hydroxy 70.3 40 0.00086 30.2 8.8 108 112-228 102-214 (415)
248 TIGR03709 PPK2_rel_1 polyphosp 69.4 6.9 0.00015 34.5 4.1 40 112-151 54-93 (264)
249 TIGR03707 PPK2_P_aer polyphosp 68.6 7 0.00015 33.8 3.9 73 112-199 29-102 (230)
250 PF03205 MobB: Molybdopterin g 67.8 13 0.00029 29.3 5.1 44 116-159 2-45 (140)
251 PF01580 FtsK_SpoIIIE: FtsK/Sp 66.8 29 0.00063 29.0 7.4 79 93-181 27-113 (205)
252 PRK05282 (alpha)-aspartyl dipe 66.1 20 0.00043 31.0 6.2 92 113-205 31-131 (233)
253 COG4287 PqaA PhoPQ-activated p 64.1 14 0.0003 34.1 5.0 45 170-217 215-262 (507)
254 cd05312 NAD_bind_1_malic_enz N 61.7 11 0.00024 33.5 3.9 82 116-204 27-124 (279)
255 PF09949 DUF2183: Uncharacteri 60.7 66 0.0014 23.8 7.9 81 132-217 14-96 (100)
256 PF03976 PPK2: Polyphosphate k 60.4 4.9 0.00011 34.6 1.4 40 112-151 29-68 (228)
257 PF14606 Lipase_GDSL_3: GDSL-l 59.8 21 0.00045 29.5 4.9 32 163-194 71-102 (178)
258 TIGR00455 apsK adenylylsulfate 58.8 56 0.0012 26.7 7.6 39 112-150 16-54 (184)
259 cd04502 SGNH_hydrolase_like_7 58.3 47 0.001 26.6 7.0 75 115-193 23-97 (171)
260 PRK00889 adenylylsulfate kinas 58.0 25 0.00055 28.5 5.3 38 113-150 3-40 (175)
261 COG4088 Predicted nucleotide k 56.7 17 0.00037 30.9 3.9 36 115-150 2-37 (261)
262 PRK03846 adenylylsulfate kinas 55.3 87 0.0019 26.0 8.3 39 112-150 22-60 (198)
263 KOG2170 ATPase of the AAA+ sup 53.1 24 0.00051 31.8 4.4 31 111-142 107-138 (344)
264 PRK05368 homoserine O-succinyl 52.7 31 0.00066 31.2 5.2 60 139-207 96-155 (302)
265 cd01838 Isoamyl_acetate_hydrol 51.8 62 0.0013 26.3 6.8 77 116-193 34-115 (199)
266 cd01833 XynB_like SGNH_hydrola 51.1 61 0.0013 25.4 6.4 70 119-192 17-86 (157)
267 PRK10824 glutaredoxin-4; Provi 50.8 99 0.0022 23.5 7.0 82 112-209 14-95 (115)
268 PRK07933 thymidylate kinase; V 50.0 42 0.00092 28.4 5.5 42 116-157 2-43 (213)
269 PF08484 Methyltransf_14: C-me 49.6 49 0.0011 26.8 5.5 44 170-217 55-98 (160)
270 cd03146 GAT1_Peptidase_E Type 49.0 1.6E+02 0.0035 24.8 9.5 40 112-152 30-70 (212)
271 KOG4389 Acetylcholinesterase/B 48.7 21 0.00047 34.2 3.7 107 112-222 134-254 (601)
272 cd03131 GATase1_HTS Type 1 glu 47.6 18 0.00039 29.8 2.7 61 139-208 59-119 (175)
273 COG1073 Hydrolases of the alph 47.1 1 2.2E-05 39.5 -5.1 92 112-207 87-181 (299)
274 KOG4022 Dihydropteridine reduc 46.8 1E+02 0.0022 25.2 6.6 53 132-184 17-69 (236)
275 TIGR00365 monothiol glutaredox 46.7 1.1E+02 0.0024 22.2 7.5 81 112-209 11-92 (97)
276 PF08433 KTI12: Chromatin asso 46.1 57 0.0012 28.9 5.9 62 115-179 2-63 (270)
277 cd01828 sialate_O-acetylestera 45.7 1.2E+02 0.0026 24.0 7.5 73 116-193 23-95 (169)
278 TIGR03708 poly_P_AMP_trns poly 44.3 37 0.0008 32.9 4.7 42 112-153 38-79 (493)
279 PF09419 PGP_phosphatase: Mito 44.2 65 0.0014 26.3 5.4 53 138-196 36-88 (168)
280 COG1763 MobB Molybdopterin-gua 43.7 49 0.0011 26.8 4.7 41 114-154 2-42 (161)
281 TIGR00176 mobB molybdopterin-g 43.6 47 0.001 26.6 4.6 39 116-154 1-39 (155)
282 PRK06171 sorbitol-6-phosphate 43.2 1.1E+02 0.0023 26.5 7.2 65 116-184 11-76 (266)
283 PF12242 Eno-Rase_NADH_b: NAD( 42.8 56 0.0012 22.9 4.1 43 167-209 18-63 (78)
284 COG3340 PepE Peptidase E [Amin 41.0 22 0.00047 30.2 2.2 89 112-201 31-132 (224)
285 PF01935 DUF87: Domain of unkn 41.0 46 0.001 28.3 4.5 35 118-152 27-62 (229)
286 TIGR01425 SRP54_euk signal rec 40.5 57 0.0012 31.1 5.2 39 112-150 98-136 (429)
287 PRK06490 glutamine amidotransf 40.3 2.4E+02 0.0053 24.3 9.8 84 112-205 7-104 (239)
288 PLN02924 thymidylate kinase 40.3 75 0.0016 27.1 5.6 43 111-153 13-55 (220)
289 PRK10751 molybdopterin-guanine 40.3 74 0.0016 26.1 5.3 43 112-154 4-46 (173)
290 cd07198 Patatin Patatin-like p 40.3 49 0.0011 26.8 4.3 34 175-209 16-49 (172)
291 PRK13700 conjugal transfer pro 40.2 47 0.001 33.8 4.8 37 116-152 187-223 (732)
292 cd07225 Pat_PNPLA6_PNPLA7 Pata 39.5 45 0.00098 30.2 4.3 33 175-208 33-65 (306)
293 cd01825 SGNH_hydrolase_peri1 S 39.5 1.8E+02 0.004 23.3 7.8 54 138-194 52-105 (189)
294 cd01836 FeeA_FeeB_like SGNH_hy 39.2 1.4E+02 0.0031 24.1 7.1 71 117-192 43-113 (191)
295 KOG2521 Uncharacterized conser 39.2 1.2E+02 0.0026 28.0 6.9 88 112-204 37-127 (350)
296 PF00004 AAA: ATPase family as 39.1 1E+02 0.0022 23.0 5.8 56 117-182 1-56 (132)
297 cd04951 GT1_WbdM_like This fam 39.1 2.3E+02 0.0051 25.2 9.1 38 115-152 2-39 (360)
298 PRK10279 hypothetical protein; 39.0 44 0.00095 30.2 4.1 32 175-207 23-54 (300)
299 cd07020 Clp_protease_NfeD_1 No 38.8 2.2E+02 0.0048 23.4 8.5 77 116-207 3-85 (187)
300 PF01656 CbiA: CobQ/CobB/MinD/ 38.7 52 0.0011 26.8 4.3 34 118-151 3-36 (195)
301 cd02027 APSK Adenosine 5'-phos 38.4 1.1E+02 0.0024 24.1 6.0 35 116-150 1-35 (149)
302 PF10412 TrwB_AAD_bind: Type I 38.3 40 0.00087 31.6 3.9 36 117-152 18-53 (386)
303 cd01983 Fer4_NifH The Fer4_Nif 38.2 63 0.0014 22.4 4.2 32 118-149 3-34 (99)
304 PRK09004 FMN-binding protein M 37.9 1.7E+02 0.0037 23.0 7.0 77 116-192 4-89 (146)
305 PRK12467 peptide synthase; Pro 37.9 1.4E+02 0.0031 37.1 9.2 86 113-206 3692-3777(3956)
306 COG1087 GalE UDP-glucose 4-epi 37.6 63 0.0014 29.2 4.7 37 117-157 3-39 (329)
307 cd01832 SGNH_hydrolase_like_1 37.5 1.3E+02 0.0028 24.2 6.5 71 117-192 42-112 (185)
308 PRK06696 uridine kinase; Valid 37.3 71 0.0015 27.1 5.0 38 112-149 20-57 (223)
309 COG2830 Uncharacterized protei 37.1 42 0.00092 27.2 3.2 31 187-221 58-88 (214)
310 cd07207 Pat_ExoU_VipD_like Exo 36.5 58 0.0013 26.8 4.3 34 174-208 16-49 (194)
311 PF13439 Glyco_transf_4: Glyco 36.5 1.1E+02 0.0024 23.8 5.9 29 126-154 13-41 (177)
312 cd03028 GRX_PICOT_like Glutare 36.2 1.6E+02 0.0034 20.9 8.4 82 112-209 7-88 (90)
313 TIGR02759 TraD_Ftype type IV c 36.1 59 0.0013 32.2 4.8 38 116-153 178-215 (566)
314 PRK05541 adenylylsulfate kinas 36.0 69 0.0015 25.9 4.6 38 112-149 5-42 (176)
315 cd07210 Pat_hypo_W_succinogene 35.2 68 0.0015 27.4 4.5 32 175-207 18-49 (221)
316 PF02492 cobW: CobW/HypB/UreG, 35.1 56 0.0012 26.7 3.9 33 115-148 1-33 (178)
317 PRK13529 malate dehydrogenase; 34.9 52 0.0011 32.4 4.1 80 116-202 297-399 (563)
318 PRK13768 GTPase; Provisional 34.8 69 0.0015 28.0 4.6 36 115-150 3-38 (253)
319 COG3967 DltE Short-chain dehyd 34.6 1.3E+02 0.0029 25.6 5.9 52 132-188 19-81 (245)
320 COG0552 FtsY Signal recognitio 34.4 3.7E+02 0.0079 24.7 9.0 83 129-219 208-292 (340)
321 PRK13973 thymidylate kinase; P 34.3 1E+02 0.0022 26.0 5.5 40 114-153 3-42 (213)
322 TIGR03708 poly_P_AMP_trns poly 33.9 51 0.0011 32.0 3.9 70 111-195 296-366 (493)
323 PF00101 RuBisCO_small: Ribulo 33.8 1.9E+02 0.0042 21.3 7.7 64 131-194 16-83 (99)
324 TIGR02069 cyanophycinase cyano 33.8 2.8E+02 0.006 24.3 8.2 39 112-151 27-66 (250)
325 PTZ00062 glutaredoxin; Provisi 33.7 2.6E+02 0.0056 23.7 7.6 81 112-209 112-193 (204)
326 cd07212 Pat_PNPLA9 Patatin-lik 33.7 67 0.0015 29.1 4.5 18 189-206 35-52 (312)
327 COG0552 FtsY Signal recognitio 33.7 80 0.0017 28.9 4.8 37 112-148 137-173 (340)
328 COG0331 FabD (acyl-carrier-pro 33.5 53 0.0012 29.8 3.7 29 177-205 75-104 (310)
329 PF03575 Peptidase_S51: Peptid 33.4 87 0.0019 24.9 4.7 23 130-152 1-23 (154)
330 cd00762 NAD_bind_malic_enz NAD 33.3 51 0.0011 28.9 3.4 83 116-205 27-126 (254)
331 KOG1199 Short-chain alcohol de 33.2 1.8E+02 0.004 24.0 6.3 79 112-196 7-92 (260)
332 PF08386 Abhydrolase_4: TAP-li 33.2 25 0.00054 26.0 1.3 19 310-328 33-51 (103)
333 PF04204 HTS: Homoserine O-suc 32.9 1.4E+02 0.003 26.9 6.2 60 138-206 94-153 (298)
334 cd07227 Pat_Fungal_NTE1 Fungal 32.5 67 0.0015 28.4 4.1 32 175-207 28-59 (269)
335 TIGR00128 fabD malonyl CoA-acy 32.4 57 0.0012 28.8 3.8 22 185-206 82-103 (290)
336 PF10566 Glyco_hydro_97: Glyco 32.2 2.4E+02 0.0053 25.1 7.5 66 131-198 34-99 (273)
337 PRK00771 signal recognition pa 32.2 90 0.0019 29.9 5.2 40 112-151 93-132 (437)
338 cd04501 SGNH_hydrolase_like_4 32.2 2.5E+02 0.0054 22.5 7.4 64 115-182 32-95 (183)
339 PRK06398 aldose dehydrogenase; 32.2 2E+02 0.0043 24.8 7.1 65 116-185 8-72 (258)
340 PRK00652 lpxK tetraacyldisacch 32.0 1.9E+02 0.0042 26.4 7.1 33 124-157 61-93 (325)
341 cd01822 Lysophospholipase_L1_l 32.0 2.6E+02 0.0056 22.1 7.7 72 115-192 37-108 (177)
342 PRK06523 short chain dehydroge 31.7 1.9E+02 0.0041 24.7 7.0 64 116-184 11-76 (260)
343 TIGR02964 xanthine_xdhC xanthi 31.7 1.8E+02 0.004 25.3 6.7 36 112-153 99-134 (246)
344 cd07228 Pat_NTE_like_bacteria 31.6 88 0.0019 25.4 4.5 33 175-208 18-50 (175)
345 cd07209 Pat_hypo_Ecoli_Z1214_l 31.4 73 0.0016 27.0 4.1 33 175-208 16-48 (215)
346 PF04084 ORC2: Origin recognit 31.1 3.4E+02 0.0073 24.8 8.5 81 117-199 57-150 (326)
347 PF05673 DUF815: Protein of un 31.1 1.7E+02 0.0038 25.6 6.3 35 116-150 54-88 (249)
348 cd02036 MinD Bacterial cell di 30.9 97 0.0021 24.8 4.7 34 118-151 4-37 (179)
349 cd01834 SGNH_hydrolase_like_2 30.8 1.1E+02 0.0024 24.6 5.1 26 166-191 85-110 (191)
350 COG1089 Gmd GDP-D-mannose dehy 30.8 1.7E+02 0.0037 26.4 6.2 34 116-153 4-37 (345)
351 PRK10867 signal recognition pa 30.6 96 0.0021 29.6 5.1 39 112-150 98-137 (433)
352 TIGR03131 malonate_mdcH malona 30.6 83 0.0018 28.0 4.5 23 184-206 74-96 (295)
353 TIGR02884 spore_pdaA delta-lac 30.6 75 0.0016 27.1 4.1 35 114-149 187-221 (224)
354 cd07224 Pat_like Patatin-like 30.6 58 0.0013 28.1 3.4 34 175-208 17-51 (233)
355 PRK12745 3-ketoacyl-(acyl-carr 30.4 1.5E+02 0.0033 25.2 6.1 65 116-184 4-79 (256)
356 PRK06114 short chain dehydroge 30.4 2E+02 0.0044 24.5 6.9 65 116-184 10-85 (254)
357 smart00827 PKS_AT Acyl transfe 30.4 66 0.0014 28.5 3.9 23 184-206 80-102 (298)
358 cd01523 RHOD_Lact_B Member of 30.3 1.1E+02 0.0024 21.9 4.5 33 112-152 61-93 (100)
359 PF05707 Zot: Zonular occluden 30.3 63 0.0014 26.8 3.5 39 115-154 1-40 (193)
360 PF09757 Arb2: Arb2 domain; I 30.0 17 0.00037 29.9 0.0 41 112-152 98-149 (178)
361 COG2240 PdxK Pyridoxal/pyridox 29.9 1.9E+02 0.0042 25.8 6.4 64 118-193 10-81 (281)
362 PRK07856 short chain dehydroge 29.8 1.6E+02 0.0035 25.1 6.2 75 116-196 8-84 (252)
363 KOG2728 Uncharacterized conser 29.8 3E+02 0.0065 24.2 7.3 68 70-152 16-83 (302)
364 TIGR03586 PseI pseudaminic aci 29.7 3.1E+02 0.0067 25.1 8.0 78 113-204 134-212 (327)
365 KOG1610 Corticosteroid 11-beta 29.6 1.9E+02 0.0041 26.3 6.4 69 116-188 31-107 (322)
366 COG2840 Uncharacterized protei 29.6 67 0.0015 26.7 3.4 42 116-158 98-139 (184)
367 cd03129 GAT1_Peptidase_E_like 29.6 2.1E+02 0.0046 23.9 6.6 89 113-203 29-130 (210)
368 PRK07053 glutamine amidotransf 29.3 3.7E+02 0.008 23.1 9.7 83 113-205 3-101 (234)
369 cd07218 Pat_iPLA2 Calcium-inde 29.3 96 0.0021 27.0 4.5 34 175-208 18-52 (245)
370 CHL00175 minD septum-site dete 29.2 1.4E+02 0.0029 26.4 5.6 39 113-151 15-53 (281)
371 cd07205 Pat_PNPLA6_PNPLA7_NTE1 29.1 1E+02 0.0022 24.9 4.5 32 175-207 18-49 (175)
372 TIGR00959 ffh signal recogniti 29.0 1.2E+02 0.0027 28.8 5.5 39 112-150 97-136 (428)
373 TIGR03371 cellulose_yhjQ cellu 28.8 1.1E+02 0.0024 26.1 4.9 40 115-154 3-42 (246)
374 KOG0635 Adenosine 5'-phosphosu 28.7 1.5E+02 0.0032 24.0 4.9 39 112-150 29-67 (207)
375 PRK11613 folP dihydropteroate 28.2 3.5E+02 0.0076 24.2 7.9 26 130-156 164-191 (282)
376 PF10686 DUF2493: Protein of u 28.1 1.2E+02 0.0026 20.7 3.9 34 112-148 30-63 (71)
377 PLN02211 methyl indole-3-aceta 28.1 37 0.00081 29.9 1.8 21 308-328 207-228 (273)
378 TIGR02764 spore_ybaN_pdaB poly 28.0 44 0.00095 27.6 2.1 36 114-149 152-188 (191)
379 PRK13656 trans-2-enoyl-CoA red 28.0 1E+02 0.0022 29.0 4.6 73 126-201 200-276 (398)
380 PRK08220 2,3-dihydroxybenzoate 28.0 1.8E+02 0.0039 24.7 6.1 64 117-184 11-75 (252)
381 cd07208 Pat_hypo_Ecoli_yjju_li 27.9 91 0.002 27.3 4.2 35 175-209 16-50 (266)
382 PTZ00317 NADP-dependent malic 27.8 72 0.0016 31.4 3.7 80 116-202 299-398 (559)
383 PRK07069 short chain dehydroge 27.8 1.8E+02 0.0039 24.6 6.1 31 117-151 2-32 (251)
384 PRK09739 hypothetical protein; 27.7 3.5E+02 0.0076 22.3 7.6 67 116-182 8-80 (199)
385 PRK09435 membrane ATPase/prote 27.6 1.4E+02 0.0029 27.5 5.3 39 112-150 54-94 (332)
386 PRK14974 cell division protein 27.6 3.3E+02 0.0071 25.0 7.8 74 133-218 213-286 (336)
387 cd06562 GH20_HexA_HexB-like Be 27.5 2E+02 0.0043 26.5 6.5 26 131-156 72-98 (348)
388 PF13207 AAA_17: AAA domain; P 27.2 98 0.0021 22.9 3.8 32 116-150 1-32 (121)
389 cd01844 SGNH_hydrolase_like_6 27.2 3E+02 0.0064 22.1 7.0 26 167-192 75-100 (177)
390 TIGR03574 selen_PSTK L-seryl-t 27.1 84 0.0018 27.2 3.8 34 116-149 1-34 (249)
391 cd03115 SRP The signal recogni 26.9 1.2E+02 0.0027 24.3 4.6 35 116-150 2-36 (173)
392 PRK05670 anthranilate synthase 26.8 2.8E+02 0.0062 22.7 6.8 76 128-205 9-90 (189)
393 PF11713 Peptidase_C80: Peptid 26.7 42 0.00092 27.1 1.7 48 150-198 61-116 (157)
394 cd03527 RuBisCO_small Ribulose 26.7 2.7E+02 0.0058 20.6 7.9 64 131-194 17-84 (99)
395 TIGR00682 lpxK tetraacyldisacc 26.5 1.8E+02 0.004 26.3 5.9 42 116-158 30-73 (311)
396 cd02067 B12-binding B12 bindin 26.5 2.7E+02 0.0059 20.7 7.0 32 116-149 3-34 (119)
397 PF13191 AAA_16: AAA ATPase do 26.5 80 0.0017 25.3 3.5 42 112-153 22-63 (185)
398 PLN02840 tRNA dimethylallyltra 26.5 2E+02 0.0043 27.4 6.3 78 112-194 19-119 (421)
399 cd00951 KDGDH 5-dehydro-4-deox 26.4 4.2E+02 0.0092 23.5 8.3 23 127-149 19-41 (289)
400 COG1341 Predicted GTPase or GT 26.3 1.2E+02 0.0026 28.4 4.8 39 112-150 71-109 (398)
401 PF02606 LpxK: Tetraacyldisacc 26.1 2.7E+02 0.0058 25.4 7.0 43 116-159 37-81 (326)
402 PRK09065 glutamine amidotransf 26.1 4.3E+02 0.0092 22.7 8.2 35 167-205 72-106 (237)
403 PRK06762 hypothetical protein; 25.9 1.1E+02 0.0025 24.2 4.2 25 114-138 2-26 (166)
404 COG1752 RssA Predicted esteras 25.9 96 0.0021 27.9 4.1 34 175-209 29-62 (306)
405 PRK06731 flhF flagellar biosyn 25.8 4.7E+02 0.01 23.2 8.5 75 132-218 143-218 (270)
406 cd01521 RHOD_PspE2 Member of t 25.7 2.1E+02 0.0045 20.9 5.3 34 111-148 63-96 (110)
407 PRK01906 tetraacyldisaccharide 25.7 3.2E+02 0.0069 25.1 7.4 41 116-157 58-100 (338)
408 cd07021 Clp_protease_NfeD_like 25.7 3.1E+02 0.0068 22.5 6.8 77 116-207 3-82 (178)
409 PLN02748 tRNA dimethylallyltra 25.6 2.3E+02 0.005 27.4 6.7 78 112-194 20-120 (468)
410 PRK06179 short chain dehydroge 25.1 2.2E+02 0.0049 24.5 6.3 65 116-184 6-72 (270)
411 COG0541 Ffh Signal recognition 25.0 1.4E+02 0.0031 28.4 5.0 41 108-148 94-134 (451)
412 TIGR03249 KdgD 5-dehydro-4-deo 25.0 5E+02 0.011 23.1 8.6 87 126-223 23-109 (296)
413 PF00698 Acyl_transf_1: Acyl t 25.0 59 0.0013 29.4 2.6 25 183-207 81-105 (318)
414 PRK05506 bifunctional sulfate 24.6 1.2E+02 0.0027 30.4 5.0 38 112-149 458-495 (632)
415 PRK10416 signal recognition pa 24.5 4.7E+02 0.01 23.8 8.3 80 131-218 185-266 (318)
416 PRK14974 cell division protein 24.5 1.6E+02 0.0035 27.0 5.3 38 112-149 138-175 (336)
417 PRK14729 miaA tRNA delta(2)-is 24.5 2.9E+02 0.0063 24.9 6.8 74 115-194 5-101 (300)
418 PRK13230 nitrogenase reductase 24.4 1.8E+02 0.0039 25.6 5.5 41 115-156 3-43 (279)
419 cd01820 PAF_acetylesterase_lik 24.3 2E+02 0.0044 24.0 5.6 29 164-192 107-135 (214)
420 TIGR00041 DTMP_kinase thymidyl 24.3 1.9E+02 0.0042 23.5 5.4 39 114-152 3-41 (195)
421 cd02037 MRP-like MRP (Multiple 24.3 1.4E+02 0.0031 23.8 4.5 35 117-151 3-37 (169)
422 KOG0780 Signal recognition par 24.2 1.1E+02 0.0024 28.8 4.0 37 112-148 99-135 (483)
423 cd03116 MobB Molybdenum is an 24.2 1.9E+02 0.004 23.3 5.0 40 116-155 3-42 (159)
424 cd07213 Pat17_PNPLA8_PNPLA9_li 24.1 1.2E+02 0.0027 26.9 4.4 33 175-207 20-55 (288)
425 cd02033 BchX Chlorophyllide re 24.0 1.9E+02 0.0041 26.5 5.6 38 113-150 30-67 (329)
426 TIGR02816 pfaB_fam PfaB family 23.9 98 0.0021 30.5 3.9 28 181-208 260-287 (538)
427 PF02310 B12-binding: B12 bind 23.7 2.2E+02 0.0049 21.0 5.3 21 131-151 17-37 (121)
428 cd00229 SGNH_hydrolase SGNH_hy 23.6 3.4E+02 0.0073 20.7 7.3 78 114-194 35-115 (187)
429 cd07204 Pat_PNPLA_like Patatin 23.3 1.3E+02 0.0028 26.1 4.3 34 175-208 17-53 (243)
430 TIGR01007 eps_fam capsular exo 23.2 2.3E+02 0.0049 23.5 5.7 38 114-151 18-55 (204)
431 cd02034 CooC The accessory pro 23.1 1.6E+02 0.0035 22.2 4.3 34 117-150 2-35 (116)
432 PRK14489 putative bifunctional 23.1 1.6E+02 0.0034 27.3 5.0 43 113-155 204-246 (366)
433 PF06792 UPF0261: Uncharacteri 23.1 5.4E+02 0.012 24.4 8.3 94 114-210 2-119 (403)
434 PRK05557 fabG 3-ketoacyl-(acyl 23.1 2.8E+02 0.0061 23.2 6.4 32 116-151 7-38 (248)
435 PF13200 DUF4015: Putative gly 23.0 2.1E+02 0.0046 26.0 5.6 65 117-182 2-73 (316)
436 PRK12937 short chain dehydroge 23.0 2.4E+02 0.0052 23.7 5.9 65 116-184 7-82 (245)
437 PF12846 AAA_10: AAA-like doma 22.9 1.3E+02 0.0028 26.3 4.4 35 118-152 5-39 (304)
438 PRK07667 uridine kinase; Provi 22.9 2.2E+02 0.0047 23.5 5.4 42 112-153 15-56 (193)
439 PF02972 Phycoerythr_ab: Phyco 22.6 62 0.0013 20.9 1.5 13 145-157 5-17 (57)
440 PRK14494 putative molybdopteri 22.6 1.9E+02 0.0041 25.0 5.0 40 116-155 3-42 (229)
441 cd01394 radB RadB. The archaea 22.6 1.9E+02 0.0042 24.2 5.2 38 113-150 18-55 (218)
442 PRK03620 5-dehydro-4-deoxygluc 22.6 5.6E+02 0.012 23.0 8.4 23 127-149 26-48 (303)
443 cd07230 Pat_TGL4-5_like Triacy 22.5 93 0.002 29.6 3.4 34 175-209 91-124 (421)
444 KOG3035 Isoamyl acetate-hydrol 22.5 1.8E+02 0.0039 24.9 4.6 77 114-191 37-121 (245)
445 PRK12595 bifunctional 3-deoxy- 22.2 5.3E+02 0.011 24.0 8.2 75 112-196 224-299 (360)
446 PRK02399 hypothetical protein; 22.1 6.8E+02 0.015 23.7 9.0 24 187-210 98-121 (406)
447 TIGR01969 minD_arch cell divis 22.1 1.9E+02 0.0041 24.7 5.1 27 126-152 13-39 (251)
448 TIGR02873 spore_ylxY probable 22.0 90 0.0019 27.6 3.0 34 114-149 231-264 (268)
449 cd02028 UMPK_like Uridine mono 22.0 3.4E+02 0.0074 22.1 6.4 37 116-152 1-37 (179)
450 COG5192 BMS1 GTP-binding prote 21.9 7.8E+02 0.017 24.7 9.2 110 112-233 67-183 (1077)
451 COG1448 TyrB Aspartate/tyrosin 21.7 6.8E+02 0.015 23.5 8.7 88 113-222 171-264 (396)
452 COG1663 LpxK Tetraacyldisaccha 21.6 5.6E+02 0.012 23.5 8.0 33 124-157 59-91 (336)
453 PRK09134 short chain dehydroge 21.5 2.8E+02 0.0061 23.7 6.1 33 116-152 11-43 (258)
454 COG1092 Predicted SAM-dependen 21.4 4E+02 0.0087 25.1 7.3 44 134-182 280-325 (393)
455 cd07221 Pat_PNPLA3 Patatin-lik 21.4 1.5E+02 0.0034 25.9 4.4 21 188-208 34-54 (252)
456 PTZ00445 p36-lilke protein; Pr 21.4 4.3E+02 0.0094 22.6 6.7 65 131-197 31-103 (219)
457 PRK05568 flavodoxin; Provision 21.2 3.8E+02 0.0083 20.5 7.1 78 115-194 4-91 (142)
458 PF03358 FMN_red: NADPH-depend 21.1 98 0.0021 24.2 2.9 66 116-182 3-71 (152)
459 PF03808 Glyco_tran_WecB: Glyc 21.0 3.7E+02 0.0079 21.8 6.3 53 170-226 88-140 (172)
460 cd02032 Bchl_like This family 20.9 1.6E+02 0.0034 25.7 4.4 35 121-155 7-41 (267)
461 PF08250 Sperm_act_pep: Sperm- 20.9 19 0.00041 14.7 -0.7 6 192-197 1-6 (10)
462 TIGR01968 minD_bact septum sit 20.9 2.1E+02 0.0045 24.5 5.2 37 116-152 4-40 (261)
463 PRK07952 DNA replication prote 20.8 1.7E+02 0.0036 25.5 4.4 35 116-150 101-135 (244)
464 cd07222 Pat_PNPLA4 Patatin-lik 20.6 1.4E+02 0.0031 25.9 3.9 31 175-205 17-50 (246)
465 PLN03129 NADP-dependent malic 20.6 99 0.0022 30.6 3.2 80 116-202 323-418 (581)
466 PHA02519 plasmid partition pro 20.5 3E+02 0.0065 25.8 6.3 45 112-156 104-150 (387)
467 COG1506 DAP2 Dipeptidyl aminop 20.5 4.6E+02 0.01 26.3 8.0 66 112-182 550-616 (620)
468 PRK08116 hypothetical protein; 20.4 1.7E+02 0.0036 25.9 4.4 36 115-150 115-150 (268)
469 PF01695 IstB_IS21: IstB-like 20.3 1.5E+02 0.0032 24.3 3.8 35 116-150 49-83 (178)
470 PRK13235 nifH nitrogenase redu 20.3 1.8E+02 0.004 25.4 4.7 39 116-155 4-42 (274)
471 TIGR02690 resist_ArsH arsenica 20.3 5.5E+02 0.012 21.9 10.4 27 168-194 105-137 (219)
472 TIGR00064 ftsY signal recognit 20.3 2.3E+02 0.0051 25.0 5.3 37 114-150 72-108 (272)
473 cd01672 TMPK Thymidine monopho 20.3 2.2E+02 0.0048 23.0 5.0 37 116-152 2-38 (200)
474 PRK12828 short chain dehydroge 20.3 1.3E+02 0.0028 25.2 3.6 65 116-184 9-81 (239)
475 TIGR00750 lao LAO/AO transport 20.3 2.2E+02 0.0049 25.4 5.3 38 113-150 33-70 (300)
476 PF00448 SRP54: SRP54-type pro 20.3 1.7E+02 0.0037 24.4 4.2 76 131-218 72-147 (196)
477 cd07220 Pat_PNPLA2 Patatin-lik 20.2 1.6E+02 0.0034 25.8 4.1 34 175-208 22-58 (249)
478 TIGR03018 pepcterm_TyrKin exop 20.2 3.1E+02 0.0067 22.8 5.9 39 113-151 35-74 (207)
479 TIGR01281 DPOR_bchL light-inde 20.1 2E+02 0.0043 25.0 4.9 35 121-155 7-41 (268)
480 TIGR02237 recomb_radB DNA repa 20.0 2.5E+02 0.0054 23.2 5.3 40 113-152 11-50 (209)
481 cd01741 GATase1_1 Subgroup of 20.0 4.8E+02 0.01 21.1 8.8 35 166-204 64-98 (188)
482 cd03818 GT1_ExpC_like This fam 20.0 2.2E+02 0.0048 26.3 5.5 38 116-157 2-39 (396)
No 1
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=100.00 E-value=7.7e-55 Score=391.26 Aligned_cols=301 Identities=39% Similarity=0.713 Sum_probs=269.0
Q ss_pred CCCCCCCCCCceecccch-hchhhhcccCCCCCCCCCCCCCchhHHHHHhhhhcCCCCCCcceEEEEcCCCCEEEEEeec
Q 020156 25 AMPYNHPHPSLEVTGGAL-HTFLPALKTLSRPYSPFPVIGWNCHVETIFAAFFRSLPDVKLKRECIRTKDDGSVALDWIS 103 (330)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~y~p~p~~~~~~~~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~ 103 (330)
.+.+...++.+...++.. +.++++|+.++..|.| .+|+++||+||++..++++.|.+.|+|+.++++||+++++||..
T Consensus 34 ~~~~~~~~~~l~~~~~~f~~~l~~~~~~l~~~y~p-~~w~~~ghlQT~~~~~~~~~p~~~y~Reii~~~DGG~~~lDW~~ 112 (409)
T KOG1838|consen 34 YLKSPPRKPSLFCGDSGFARFLVPKCPLLEEKYLP-TLWLFSGHLQTLLLSFFGSKPPVEYTREIIKTSDGGTVTLDWVE 112 (409)
T ss_pred eeeccCCCCeeecCchHHHHHHHhhcccccccccc-ceeecCCeeeeeehhhcCCCCCCcceeEEEEeCCCCEEEEeecc
Confidence 444555566666555555 7799999999999999 56669999999999999999999999999999999999999997
Q ss_pred CCCCC---CCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHH
Q 020156 104 GDHQL---LPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVG 180 (330)
Q Consensus 104 ~~~~~---~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~ 180 (330)
+.... .....|+||++||++|+|++.|+++++..+.++||+|+++|.||||+|+.++++++..++++|+++++++++
T Consensus 113 ~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~ 192 (409)
T KOG1838|consen 113 NPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIK 192 (409)
T ss_pred CcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHH
Confidence 65421 134679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHhhHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHh
Q 020156 181 SKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRK-GFNIVYDKALASALCRIFKKHALLF 259 (330)
Q Consensus 181 ~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~ 259 (330)
++||+.++.++|+||||++.++|+++.++++++.+++++|+|||.......+.. ...++|++.+..++++.+..+...+
T Consensus 193 ~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~ 272 (409)
T KOG1838|consen 193 KRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTL 272 (409)
T ss_pred HhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhh
Confidence 999999999999999999999999999999999999999999998755554444 4578999999999999999888844
Q ss_pred hhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHHhCCcccccCCCCcceEEEEecCCcccccc
Q 020156 260 EDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQVGCFYHFQRQ 328 (330)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~~P~Lii~g~~D~~f~~~ 328 (330)
... ..+.+.+.+.++++|||+.++++.+||++.++||+++|+.+++++|++|+|+|++.+|++.+.+
T Consensus 273 ~~~--~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~ 339 (409)
T KOG1838|consen 273 FED--PVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEE 339 (409)
T ss_pred hhc--cchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcc
Confidence 432 4567788888999999999999999999999999999999999999999999999999998864
No 2
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=100.00 E-value=3.4e-52 Score=361.55 Aligned_cols=273 Identities=32% Similarity=0.574 Sum_probs=251.3
Q ss_pred CCCCCCCCCCCCchhHHHHHh--hhhcCCCCCCcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHH
Q 020156 53 SRPYSPFPVIGWNCHVETIFA--AFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSY 130 (330)
Q Consensus 53 ~~~y~p~p~~~~~~~~qt~~~--~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~ 130 (330)
..+|.|.||+++|||+||++. ..+++.+.+.++||.+.++||+.+.++|..++. ...+|.||++||++|++++.|
T Consensus 16 ~~~f~p~~~~L~ng~lqTl~~~~~~frr~~~~~~~re~v~~pdg~~~~ldw~~~p~---~~~~P~vVl~HGL~G~s~s~y 92 (345)
T COG0429 16 SPPFDPLPWGLFNGHLQTLYPSLRLFRRKPKVAYTRERLETPDGGFIDLDWSEDPR---AAKKPLVVLFHGLEGSSNSPY 92 (345)
T ss_pred cCcCCCCcccccCcchhhhhhhHHHhhcccccccceEEEEcCCCCEEEEeeccCcc---ccCCceEEEEeccCCCCcCHH
Confidence 356777788889999999999 668899999999999999999999999998542 346799999999999999999
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC
Q 020156 131 VRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS 210 (330)
Q Consensus 131 ~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~ 210 (330)
++.+...+.++||.||++|+|||+++...++.+++.++++|++.++++++..++.++++.+|+|+||++.++|++++++.
T Consensus 93 ~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d 172 (345)
T COG0429 93 ARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDD 172 (345)
T ss_pred HHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEEcCCCChHhhHHHHhcchH-HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHhcCCCHHHHhhccccccC
Q 020156 211 CPLSGAVSLCNPFNLVIADQDFRKGFN-IVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSF 289 (330)
Q Consensus 211 ~~i~~~v~~~~p~d~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 289 (330)
+++.+++++|+|+|+..+...+.+++. ++|.+.+.+.+.+.+.++...++..-+..-.+.++.+++++|||+.+|.+.+
T Consensus 173 ~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~ 252 (345)
T COG0429 173 LPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLH 252 (345)
T ss_pred cccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeeccc
Confidence 999999999999999999999999988 9999999999999999887777332211126678899999999999999999
Q ss_pred CCCCHHHHHHhCCcccccCCCCcceEEEEecCCcccccc
Q 020156 290 GFKSVDDYYSNSSSSDSIKHVRIPLLCIQVGCFYHFQRQ 328 (330)
Q Consensus 290 g~~~~~~yy~~~s~~~~l~~I~~P~Lii~g~~D~~f~~~ 328 (330)
||+++.|||+++|+.+.+++|++|+||||+.+|++++.+
T Consensus 253 Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~ 291 (345)
T COG0429 253 GFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPE 291 (345)
T ss_pred CCCcHHHHHHhccccccccccccceEEEecCCCCCCChh
Confidence 999999999999999999999999999999999999864
No 3
>PLN02511 hydrolase
Probab=100.00 E-value=3.1e-48 Score=361.14 Aligned_cols=297 Identities=74% Similarity=1.234 Sum_probs=258.7
Q ss_pred CCCCceecccchhchhhhcccCCCCCCCCCCCCCchhHHHHHhhhhcCCCCCCcceEEEEcCCCCEEEEEeecCCCCCCC
Q 020156 31 PHPSLEVTGGALHTFLPALKTLSRPYSPFPVIGWNCHVETIFAAFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQLLP 110 (330)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~~y~p~p~~~~~~~~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~ 110 (330)
.+.+++++++..+.++++||.|..+|+|+||+ .|+|+||+|..++++.+.+.|+|+.+.++||+.+.+||........+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~y~p~~wl-~n~h~qT~~~~~~~~~~~~~~~re~l~~~DG~~~~ldw~~~~~~~~~ 97 (388)
T PLN02511 19 EHSSLEVIGGGRDSFLPKFKSLERPYDAFPLL-GNRHVETIFASFFRSLPAVRYRRECLRTPDGGAVALDWVSGDDRALP 97 (388)
T ss_pred CccceeeccchHHHHHHhhhhhcCCccCCccC-CCccHHHhhHHHhcCCCCCceeEEEEECCCCCEEEEEecCcccccCC
Confidence 45567777878888999999999999997665 89999999999999888899999999999999999999864322234
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
.++|+||++||++|++.+.|++.++..+.++||+|+++|+||||+|+...+..+...+++|+.+++++++.++++.++++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~l 177 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYA 177 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEE
Confidence 46899999999999888778888888888999999999999999998877777888999999999999999998889999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHhhHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHH
Q 020156 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPL 270 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 270 (330)
+||||||++++.|++++++...|.+++++++|+++......+..++..+|+..+...+++...++...+......++...
T Consensus 178 vG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 257 (388)
T PLN02511 178 AGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPL 257 (388)
T ss_pred EEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHH
Confidence 99999999999999999987679999999999988666666666666788888888887777666655655544556667
Q ss_pred HhcCCCHHHHhhccccccCCCCCHHHHHHhCCcccccCCCCcceEEEEecCCcccccc
Q 020156 271 AANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQVGCFYHFQRQ 328 (330)
Q Consensus 271 ~~~~~~~~~~d~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~~P~Lii~g~~D~~f~~~ 328 (330)
+...+++.+||+.++.+.+||.+.++||+..++.+.+++|++|+|+|+|++|++++.+
T Consensus 258 ~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~ 315 (388)
T PLN02511 258 VANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPAR 315 (388)
T ss_pred HHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcc
Confidence 7788999999999999999999999999999999999999999999999999988754
No 4
>PRK10985 putative hydrolase; Provisional
Probab=100.00 E-value=2.1e-41 Score=308.90 Aligned_cols=271 Identities=24% Similarity=0.391 Sum_probs=228.8
Q ss_pred CCCCCCCCCCCchhHHHHHhhhhcCCCCCCcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHH
Q 020156 54 RPYSPFPVIGWNCHVETIFAAFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRH 133 (330)
Q Consensus 54 ~~y~p~p~~~~~~~~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~ 133 (330)
++|.|+||+ .|+|+||++..++++.+.+.++++.++++||+.+.++|..... ....+|+||++||++|++.+.|+..
T Consensus 2 ~~~~p~~~~-~~~h~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~l~w~~~~~--~~~~~p~vll~HG~~g~~~~~~~~~ 78 (324)
T PRK10985 2 AEFTPMRGA-SNPHLQTLLPRLIRRKVLFTPYWQRLELPDGDFVDLAWSEDPA--QARHKPRLVLFHGLEGSFNSPYAHG 78 (324)
T ss_pred CCCCCCcCC-CCCcHHHhhHHHhcCCCCCCcceeEEECCCCCEEEEecCCCCc--cCCCCCEEEEeCCCCCCCcCHHHHH
Confidence 579997664 8999999999999988889999999999999999999975331 2335799999999998877778888
Q ss_pred HHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCc
Q 020156 134 MLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPL 213 (330)
Q Consensus 134 ~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i 213 (330)
++..+.++||+|+++|+||||+++...+..+.....+|+.+++++++++++..+++++||||||++++.+++++++...+
T Consensus 79 ~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~ 158 (324)
T PRK10985 79 LLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPL 158 (324)
T ss_pred HHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCc
Confidence 99999999999999999999988766566666778899999999999988888999999999999999999988765458
Q ss_pred ceEEEEcCCCChHhhHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCC
Q 020156 214 SGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKS 293 (330)
Q Consensus 214 ~~~v~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~ 293 (330)
+++|++++|+++..+...+...+.++|...+.+.+++........+.... ..+.+.+...+++.+||+.++.+.+||++
T Consensus 159 ~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~fd~~~~~~~~g~~~ 237 (324)
T PRK10985 159 DAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTL-PINLAQLKSVRRLREFDDLITARIHGFAD 237 (324)
T ss_pred cEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCHHHHhcCCcHHHHhhhheeccCCCCC
Confidence 99999999999887777777766677887777777665554444333221 23556778889999999999999999999
Q ss_pred HHHHHHhCCcccccCCCCcceEEEEecCCcccccc
Q 020156 294 VDDYYSNSSSSDSIKHVRIPLLCIQVGCFYHFQRQ 328 (330)
Q Consensus 294 ~~~yy~~~s~~~~l~~I~~P~Lii~g~~D~~f~~~ 328 (330)
..+||...+..+.+++|++|+|+|+|++|++++.+
T Consensus 238 ~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~ 272 (324)
T PRK10985 238 AIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHE 272 (324)
T ss_pred HHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChh
Confidence 99999999988999999999999999999987754
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=1.5e-21 Score=178.69 Aligned_cols=137 Identities=13% Similarity=0.187 Sum_probs=106.3
Q ss_pred CCcceEEEEcCCCCEEEEE-eecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q 020156 82 VKLKRECIRTKDDGSVALD-WISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT 160 (330)
Q Consensus 82 ~~~~~~~~~~~dg~~~~~~-~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~ 160 (330)
++++.+.++..||..+.+. |.++.. ...+++||++||++++. ..++..+...+.++||+|+++|+||||.|+...
T Consensus 30 ~~~~~~~~~~~dg~~l~~~~~~~~~~---~~~~~~VvllHG~~~~~-~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~ 105 (330)
T PLN02298 30 IKGSKSFFTSPRGLSLFTRSWLPSSS---SPPRALIFMVHGYGNDI-SWTFQSTAIFLAQMGFACFALDLEGHGRSEGLR 105 (330)
T ss_pred CccccceEEcCCCCEEEEEEEecCCC---CCCceEEEEEcCCCCCc-ceehhHHHHHHHhCCCEEEEecCCCCCCCCCcc
Confidence 4567778999999999885 544321 12568899999996543 233456677788899999999999999997532
Q ss_pred C-CccCcChHHHHHHHHHHHHHh--CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 161 P-QFYSASFLGDMQEVVAHVGSK--YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 161 ~-~~~~~~~~~D~~~~i~~l~~~--~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
. ......+.+|+.++++++... +++.+++++||||||.+++.++.++|+. |+++|++++...
T Consensus 106 ~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~--v~~lvl~~~~~~ 170 (330)
T PLN02298 106 AYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEG--FDGAVLVAPMCK 170 (330)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCccc--ceeEEEeccccc
Confidence 2 223456789999999999864 3445899999999999999999999988 999999987654
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.88 E-value=1.5e-21 Score=179.97 Aligned_cols=137 Identities=12% Similarity=0.194 Sum_probs=104.7
Q ss_pred CCCcceEEEEcCCCCEEEEE-eecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q 020156 81 DVKLKRECIRTKDDGSVALD-WISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT 159 (330)
Q Consensus 81 ~~~~~~~~~~~~dg~~~~~~-~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~ 159 (330)
.+.+++..+...||..+... |.+.++ ..+++||++||++++.. .|+..++..+.++||+|+++|+||||.|+..
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~~----~~~~~iv~lHG~~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~ 132 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPENS----RPKAAVCFCHGYGDTCT-FFFEGIARKIASSGYGVFAMDYPGFGLSEGL 132 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCCC----CCCeEEEEECCCCCccc-hHHHHHHHHHHhCCCEEEEecCCCCCCCCCC
Confidence 34455556666788877654 544321 25689999999976543 4557788888889999999999999999864
Q ss_pred CCC-ccCcChHHHHHHHHHHHHHh--CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 160 TPQ-FYSASFLGDMQEVVAHVGSK--YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 160 ~~~-~~~~~~~~D~~~~i~~l~~~--~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
... .....+++|+.++++.+... ++..+++++||||||.+++.++.++|+. ++++|++++...
T Consensus 133 ~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~--v~glVLi~p~~~ 198 (349)
T PLN02385 133 HGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNA--WDGAILVAPMCK 198 (349)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcch--hhheeEeccccc
Confidence 322 24456788999998888653 3455899999999999999999999998 999999987653
No 7
>PHA02857 monoglyceride lipase; Provisional
Probab=99.87 E-value=5.9e-21 Score=170.23 Aligned_cols=129 Identities=17% Similarity=0.199 Sum_probs=100.7
Q ss_pred EEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC-ccCc
Q 020156 88 CIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ-FYSA 166 (330)
Q Consensus 88 ~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~-~~~~ 166 (330)
.+...||..+.+.++.+.. ..+++|+++||+++++. ++..++..+.++||+|+++|+||||.|+..... ....
T Consensus 4 ~~~~~~g~~l~~~~~~~~~----~~~~~v~llHG~~~~~~--~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~ 77 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT----YPKALVFISHGAGEHSG--RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFG 77 (276)
T ss_pred eeecCCCCEEEEEeccCCC----CCCEEEEEeCCCccccc--hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHH
Confidence 4566799999887555431 25678888899976554 357888899899999999999999999753211 1223
Q ss_pred ChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 167 SFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
.+.+|+.+.+++++..++..+++++||||||.+++.++.++|+. ++++|++++..+
T Consensus 78 ~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~--i~~lil~~p~~~ 133 (276)
T PHA02857 78 VYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNL--FTAMILMSPLVN 133 (276)
T ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccc--cceEEEeccccc
Confidence 45677878887777777777999999999999999999999998 999999988654
No 8
>PRK13604 luxD acyl transferase; Provisional
Probab=99.86 E-value=1.2e-20 Score=166.85 Aligned_cols=134 Identities=17% Similarity=0.136 Sum_probs=106.9
Q ss_pred ceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCCCCc
Q 020156 85 KRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC-GDSPVTTPQF 163 (330)
Q Consensus 85 ~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~-G~S~~~~~~~ 163 (330)
...++.+.||.++..+|..|++ ..+.+.++||++||+++.. .+...+++.|.++||.|+.||+||+ |.|++.....
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~-~~~~~~~~vIi~HGf~~~~--~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~ 86 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKE-NSPKKNNTILIASGFARRM--DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEF 86 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcc-cCCCCCCEEEEeCCCCCCh--HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccC
Confidence 3456788899999999998863 1234568999999998754 2358899999999999999999988 8998766555
Q ss_pred cCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChH
Q 020156 164 YSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 164 ~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~ 226 (330)
+.....+|+.++++|++.+. ..++.++||||||.+++..|++.+ ++++|+.|+..++.
T Consensus 87 t~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~~~----v~~lI~~sp~~~l~ 144 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINEID----LSFLITAVGVVNLR 144 (307)
T ss_pred cccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcCCC----CCEEEEcCCcccHH
Confidence 55556899999999998864 458999999999999977776432 77888888877643
No 9
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.86 E-value=2.6e-20 Score=167.09 Aligned_cols=136 Identities=21% Similarity=0.321 Sum_probs=109.9
Q ss_pred CcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCC-CCCC
Q 020156 83 KLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP-VTTP 161 (330)
Q Consensus 83 ~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~-~~~~ 161 (330)
....+.+...||..+.+....+.. +.+.+||++||+...+. .| ..++..+.++||.|+++|+||||.|. ....
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~----~~~g~Vvl~HG~~Eh~~-ry-~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg 81 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPE----PPKGVVVLVHGLGEHSG-RY-EELADDLAARGFDVYALDLRGHGRSPRGQRG 81 (298)
T ss_pred ccccceeecCCCceEEEEeecCCC----CCCcEEEEecCchHHHH-HH-HHHHHHHHhCCCEEEEecCCCCCCCCCCCcC
Confidence 346677888899998877444432 13389999999977665 44 77899999999999999999999997 3222
Q ss_pred C-ccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChH
Q 020156 162 Q-FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 162 ~-~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~ 226 (330)
. -....+.+|+.++++.+...++..+++++||||||.|++.|+.+++.. |+++|+.++.+.+.
T Consensus 82 ~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~--i~~~vLssP~~~l~ 145 (298)
T COG2267 82 HVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPR--IDGLVLSSPALGLG 145 (298)
T ss_pred CchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCcc--ccEEEEECccccCC
Confidence 2 224677889999999999877888999999999999999999999977 99999888877655
No 10
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.86 E-value=5.3e-22 Score=163.31 Aligned_cols=107 Identities=21% Similarity=0.329 Sum_probs=94.5
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
++..||++||++|++++ ++.+.+.|.++||.|.++++||||..+...-..+..+|.+|+.+..++|.+. +...|.++
T Consensus 14 G~~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~ 90 (243)
T COG1647 14 GNRAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVV 90 (243)
T ss_pred CCEEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEE
Confidence 44789999999999988 8999999999999999999999998875545566679999999999999965 33389999
Q ss_pred EEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
|.||||.+++.+|..+| ++++|.+|+|...
T Consensus 91 GlSmGGv~alkla~~~p----~K~iv~m~a~~~~ 120 (243)
T COG1647 91 GLSMGGVFALKLAYHYP----PKKIVPMCAPVNV 120 (243)
T ss_pred eecchhHHHHHHHhhCC----ccceeeecCCccc
Confidence 99999999999999998 6799999999864
No 11
>PRK10749 lysophospholipase L2; Provisional
Probab=99.86 E-value=3.6e-20 Score=169.56 Aligned_cols=144 Identities=17% Similarity=0.225 Sum_probs=108.0
Q ss_pred hHHHHHhhhhcCCCCCCcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEE
Q 020156 67 HVETIFAAFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVV 146 (330)
Q Consensus 67 ~~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~ 146 (330)
..|++...++.. .+...+...||..+.+....+.+ .+++||++||++++.. . +..++..+.++||+|+
T Consensus 18 ~~~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~-----~~~~vll~HG~~~~~~-~-y~~~~~~l~~~g~~v~ 85 (330)
T PRK10749 18 FTMGPLLDFWRQ-----REEAEFTGVDDIPIRFVRFRAPH-----HDRVVVICPGRIESYV-K-YAELAYDLFHLGYDVL 85 (330)
T ss_pred HHHHHHHHHHhh-----ccceEEEcCCCCEEEEEEccCCC-----CCcEEEEECCccchHH-H-HHHHHHHHHHCCCeEE
Confidence 455655555532 24455667788877766443322 5678999999966443 3 4677778889999999
Q ss_pred EEcCCCCCCCCCCCCC------ccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEc
Q 020156 147 VFNSRGCGDSPVTTPQ------FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLC 220 (330)
Q Consensus 147 ~~d~rG~G~S~~~~~~------~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~ 220 (330)
++|+||||.|+..... ....++++|+.++++.+...++..+++++||||||.+++.++.++|+. ++++|+++
T Consensus 86 ~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~--v~~lvl~~ 163 (330)
T PRK10749 86 IIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGV--FDAIALCA 163 (330)
T ss_pred EEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCC--cceEEEEC
Confidence 9999999999753221 234577889999999887666667999999999999999999999998 99999887
Q ss_pred CCCC
Q 020156 221 NPFN 224 (330)
Q Consensus 221 ~p~d 224 (330)
+...
T Consensus 164 p~~~ 167 (330)
T PRK10749 164 PMFG 167 (330)
T ss_pred chhc
Confidence 7543
No 12
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.85 E-value=5.2e-21 Score=172.96 Aligned_cols=133 Identities=20% Similarity=0.259 Sum_probs=99.2
Q ss_pred CCCCCCcceEEEEcCC--CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCC
Q 020156 78 SLPDVKLKRECIRTKD--DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD 155 (330)
Q Consensus 78 ~~~~~~~~~~~~~~~d--g~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~ 155 (330)
+.+.+++....+...+ |+...+.+....+ +++|+||++||+++++.. |..++..|.++||+|+++|+||||.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~i~y~~~G~----~~~~~lvliHG~~~~~~~--w~~~~~~L~~~gy~vi~~Dl~G~G~ 86 (302)
T PRK00870 13 NLPDYPFAPHYVDVDDGDGGPLRMHYVDEGP----ADGPPVLLLHGEPSWSYL--YRKMIPILAAAGHRVIAPDLIGFGR 86 (302)
T ss_pred CCcCCCCCceeEeecCCCCceEEEEEEecCC----CCCCEEEEECCCCCchhh--HHHHHHHHHhCCCEEEEECCCCCCC
Confidence 3444555555565544 6656666554321 146789999999765543 5777777877899999999999999
Q ss_pred CCCCC--CCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 156 SPVTT--PQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 156 S~~~~--~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
|+... ..++...+++|+.++++.+..+ +++++||||||.+++.+|.++|+. |.++|++++.
T Consensus 87 S~~~~~~~~~~~~~~a~~l~~~l~~l~~~----~v~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~ 149 (302)
T PRK00870 87 SDKPTRREDYTYARHVEWMRSWFEQLDLT----DVTLVCQDWGGLIGLRLAAEHPDR--FARLVVANTG 149 (302)
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHHcCCC----CEEEEEEChHHHHHHHHHHhChhh--eeEEEEeCCC
Confidence 97543 2344567778888888776544 899999999999999999999998 9999988864
No 13
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.85 E-value=1.5e-20 Score=169.32 Aligned_cols=121 Identities=12% Similarity=0.139 Sum_probs=95.0
Q ss_pred ceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCcc
Q 020156 85 KRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFY 164 (330)
Q Consensus 85 ~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~ 164 (330)
+.+.++. ||.++.+... . ++|+||++||+.+++.. |+.++..|.+++ +|+++|+||+|.|+.+...++
T Consensus 8 ~~~~~~~-~g~~i~y~~~--G------~g~~vvllHG~~~~~~~--w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~ 75 (295)
T PRK03592 8 EMRRVEV-LGSRMAYIET--G------EGDPIVFLHGNPTSSYL--WRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYT 75 (295)
T ss_pred cceEEEE-CCEEEEEEEe--C------CCCEEEEECCCCCCHHH--HHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCC
Confidence 3444444 5655554322 2 35789999999766543 577777777765 999999999999987665566
Q ss_pred CcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 165 SASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 165 ~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
...+++|+.++++.+..+ +++++|||+||.+++.++.++|++ |+++|+++++.
T Consensus 76 ~~~~a~dl~~ll~~l~~~----~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lil~~~~~ 128 (295)
T PRK03592 76 FADHARYLDAWFDALGLD----DVVLVGHDWGSALGFDWAARHPDR--VRGIAFMEAIV 128 (295)
T ss_pred HHHHHHHHHHHHHHhCCC----CeEEEEECHHHHHHHHHHHhChhh--eeEEEEECCCC
Confidence 778889999999888665 999999999999999999999998 99999998743
No 14
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.85 E-value=3.3e-20 Score=166.98 Aligned_cols=102 Identities=16% Similarity=0.248 Sum_probs=84.8
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-------CccCcChHHHHHHHHHHHHHhCCC
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-------QFYSASFLGDMQEVVAHVGSKYPK 185 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~-------~~~~~~~~~D~~~~i~~l~~~~~~ 185 (330)
+|+||++||+++++.. |+.++..+.++ |+|+++|+||+|.|+...+ .++..++++|+.++++.+..+
T Consensus 29 ~~~vlllHG~~~~~~~--w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~--- 102 (294)
T PLN02824 29 GPALVLVHGFGGNADH--WRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGD--- 102 (294)
T ss_pred CCeEEEECCCCCChhH--HHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCC---
Confidence 4789999999877664 56777777655 7999999999999986532 355567888888888877654
Q ss_pred CcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 186 AHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 186 ~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
+++++||||||.+++.+|.++|++ |+++|+++++.
T Consensus 103 -~~~lvGhS~Gg~va~~~a~~~p~~--v~~lili~~~~ 137 (294)
T PLN02824 103 -PAFVICNSVGGVVGLQAAVDAPEL--VRGVMLINISL 137 (294)
T ss_pred -CeEEEEeCHHHHHHHHHHHhChhh--eeEEEEECCCc
Confidence 899999999999999999999998 99999998754
No 15
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.85 E-value=1.1e-20 Score=168.70 Aligned_cols=118 Identities=14% Similarity=0.178 Sum_probs=93.3
Q ss_pred CCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHH
Q 020156 93 DDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDM 172 (330)
Q Consensus 93 dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~ 172 (330)
||.++.+.....+ .+.++||++||+++++.. +..++..+ .++|+|+++|+||||.|+.+...+....+++|+
T Consensus 10 ~~~~~~~~~~~~~-----~~~~plvllHG~~~~~~~--w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~ 81 (276)
T TIGR02240 10 DGQSIRTAVRPGK-----EGLTPLLIFNGIGANLEL--VFPFIEAL-DPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLA 81 (276)
T ss_pred CCcEEEEEEecCC-----CCCCcEEEEeCCCcchHH--HHHHHHHh-ccCceEEEECCCCCCCCCCCCCcCcHHHHHHHH
Confidence 5667666433222 145789999999776553 46666665 457999999999999998654455667888999
Q ss_pred HHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 173 QEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 173 ~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
.++++.+..+ +++++||||||.+++.+|.++|+. |+++|+++++..
T Consensus 82 ~~~i~~l~~~----~~~LvG~S~GG~va~~~a~~~p~~--v~~lvl~~~~~~ 127 (276)
T TIGR02240 82 ARMLDYLDYG----QVNAIGVSWGGALAQQFAHDYPER--CKKLILAATAAG 127 (276)
T ss_pred HHHHHHhCcC----ceEEEEECHHHHHHHHHHHHCHHH--hhheEEeccCCc
Confidence 9999998655 899999999999999999999998 999999988754
No 16
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.83 E-value=8.6e-20 Score=157.57 Aligned_cols=139 Identities=12% Similarity=0.153 Sum_probs=108.1
Q ss_pred CCCcceEEEEcCCCCEEEEE-eecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q 020156 81 DVKLKRECIRTKDDGSVALD-WISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT 159 (330)
Q Consensus 81 ~~~~~~~~~~~~dg~~~~~~-~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~ 159 (330)
.+.+....++.++|..+... |.+-.. .+.+..|+++||+++.+. ..+..++..+.+.||.|+++|++|||.|++.
T Consensus 24 ~~~~~~~~~~n~rG~~lft~~W~p~~~---~~pr~lv~~~HG~g~~~s-~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl 99 (313)
T KOG1455|consen 24 GVTYSESFFTNPRGAKLFTQSWLPLSG---TEPRGLVFLCHGYGEHSS-WRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL 99 (313)
T ss_pred ccceeeeeEEcCCCCEeEEEecccCCC---CCCceEEEEEcCCcccch-hhHHHHHHHHHhCCCeEEEeeccCCCcCCCC
Confidence 45566777888999877554 544221 236778999999987664 3347888999999999999999999999976
Q ss_pred CCCc-cCcChHHHHHHHHHHHHH--hCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 160 TPQF-YSASFLGDMQEVVAHVGS--KYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 160 ~~~~-~~~~~~~D~~~~i~~l~~--~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
.... .....++|+...++.+.. ++++-+.+++||||||.|++.++.++|+. .+++|.+++..-+
T Consensus 100 ~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~--w~G~ilvaPmc~i 166 (313)
T KOG1455|consen 100 HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNF--WDGAILVAPMCKI 166 (313)
T ss_pred cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcc--cccceeeeccccc
Confidence 5432 234567899999997554 45666999999999999999999999987 8898888876543
No 17
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.82 E-value=5.1e-19 Score=157.97 Aligned_cols=105 Identities=12% Similarity=0.134 Sum_probs=80.6
Q ss_pred CCcEEEEeCCCCCCCchH-HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC-ccCcChHHHHHHHHHHHHHhCCCCcEE
Q 020156 112 DSPVLILMPGLTGGSEDS-YVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ-FYSASFLGDMQEVVAHVGSKYPKAHLY 189 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~-~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~-~~~~~~~~D~~~~i~~l~~~~~~~~i~ 189 (330)
+.|+||++||++++.... -+...+..+.+.||+|+++|+||||.|+..... ......++|+.++++.+..+ +++
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~----~~~ 104 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIE----KAH 104 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCCC----Cee
Confidence 457899999986654321 012334566778999999999999999764321 11224578888888887665 999
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 190 AVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 190 lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
++||||||.+++.++.++|++ ++++|+++++
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~~--v~~lvl~~~~ 135 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPDR--IGKLILMGPG 135 (282)
T ss_pred EEEECchHHHHHHHHHhChHh--hceEEEECCC
Confidence 999999999999999999998 9999999875
No 18
>PLN02578 hydrolase
Probab=99.82 E-value=3.2e-19 Score=164.79 Aligned_cols=103 Identities=17% Similarity=0.168 Sum_probs=83.7
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
++|+||++||++++... +......+ .++|+|+++|+||||.|+.....+....+.+|+.++++.+..+ +++++
T Consensus 85 ~g~~vvliHG~~~~~~~--w~~~~~~l-~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~~----~~~lv 157 (354)
T PLN02578 85 EGLPIVLIHGFGASAFH--WRYNIPEL-AKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKE----PAVLV 157 (354)
T ss_pred CCCeEEEECCCCCCHHH--HHHHHHHH-hcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhccC----CeEEE
Confidence 34779999999775432 45555555 4679999999999999987655566667788888888887654 89999
Q ss_pred EEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
|||+||.+++.+|.++|+. ++++|+++++.
T Consensus 158 G~S~Gg~ia~~~A~~~p~~--v~~lvLv~~~~ 187 (354)
T PLN02578 158 GNSLGGFTALSTAVGYPEL--VAGVALLNSAG 187 (354)
T ss_pred EECHHHHHHHHHHHhChHh--cceEEEECCCc
Confidence 9999999999999999998 99999987653
No 19
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.82 E-value=4e-19 Score=165.46 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=98.4
Q ss_pred ceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC-c
Q 020156 85 KRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ-F 163 (330)
Q Consensus 85 ~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~-~ 163 (330)
....+..++|..+......+.. ...+++||++||+++++.. +..++..+.++||+|+++|+||||.|+..... .
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~~---~~~~~~Vl~lHG~~~~~~~--~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~ 185 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPAA---GEMRGILIIIHGLNEHSGR--YLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVP 185 (395)
T ss_pred EEEEEECCCCCEEEEEEecCCC---CCCceEEEEECCchHHHHH--HHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCc
Confidence 3444566677766655333321 2256899999999765442 46788889899999999999999999865332 2
Q ss_pred cCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC-CCcceEEEEcCCCC
Q 020156 164 YSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS-CPLSGAVSLCNPFN 224 (330)
Q Consensus 164 ~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~-~~i~~~v~~~~p~d 224 (330)
....+.+|+.++++++..+++..+++++||||||.+++.++. +|+. ..++++|+.++...
T Consensus 186 ~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 186 SLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALR 246 (395)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccc
Confidence 234567899999999998877779999999999999997764 5541 12888888776654
No 20
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.81 E-value=2.3e-18 Score=161.59 Aligned_cols=133 Identities=17% Similarity=0.125 Sum_probs=98.4
Q ss_pred CcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC
Q 020156 83 KLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ 162 (330)
Q Consensus 83 ~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~ 162 (330)
..++..|++.||.++...+..|.. ..+.|+||++||+.+... .++..++..+.++||+|+++|+||+|.|.....
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~---~~~~P~Vli~gG~~~~~~-~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~- 241 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKG---DGPFPTVLVCGGLDSLQT-DYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL- 241 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCC---CCCccEEEEeCCcccchh-hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc-
Confidence 456677777888788877765542 235688887777754333 344677888999999999999999999864321
Q ss_pred ccCcChHHHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 163 FYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 163 ~~~~~~~~D~~~~i~~l~~~~--~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
..+......++++++...- ...+|.++|||+||++++.+|..+|++ |+++|+++++++
T Consensus 242 --~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~r--i~a~V~~~~~~~ 301 (414)
T PRK05077 242 --TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPR--LKAVACLGPVVH 301 (414)
T ss_pred --cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcC--ceEEEEECCccc
Confidence 1223334457788887642 345899999999999999999999987 999999998864
No 21
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.81 E-value=3e-19 Score=155.84 Aligned_cols=101 Identities=19% Similarity=0.226 Sum_probs=78.5
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEE
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 192 (330)
+|+||++||+++++.. |..+...+ + +|+|+++|+||+|.|..... .....+++|+.++++.+..+ +++++|
T Consensus 2 ~p~vvllHG~~~~~~~--w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~~----~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD--WQPVGEAL-P-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNIL----PYWLVG 72 (242)
T ss_pred CCEEEEECCCCCChHH--HHHHHHHc-C-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCCC----CeEEEE
Confidence 5789999999876653 46676665 3 79999999999999976432 24455667777777765443 999999
Q ss_pred EcHHHHHHHHHHhhcCC-CCCcceEEEEcCCCC
Q 020156 193 WSLGANILIRYLGHESH-SCPLSGAVSLCNPFN 224 (330)
Q Consensus 193 ~SlGg~ia~~~a~~~~~-~~~i~~~v~~~~p~d 224 (330)
|||||.+++.+|.++++ . |+++++++++..
T Consensus 73 ~S~Gg~va~~~a~~~~~~~--v~~lvl~~~~~~ 103 (242)
T PRK11126 73 YSLGGRIAMYYACQGLAGG--LCGLIVEGGNPG 103 (242)
T ss_pred ECHHHHHHHHHHHhCCccc--ccEEEEeCCCCC
Confidence 99999999999999864 4 888888876643
No 22
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.81 E-value=2.2e-19 Score=153.25 Aligned_cols=103 Identities=25% Similarity=0.435 Sum_probs=83.2
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--CccCcChHHHHHHHHHHHHHhCCCCcEEEEEE
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP--QFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~--~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 193 (330)
||++||++++... +..++..+ ++||+|+++|+||+|.|+.... .....++++|+.++++.+..+ +++++||
T Consensus 1 vv~~hG~~~~~~~--~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~----~~~lvG~ 73 (228)
T PF12697_consen 1 VVFLHGFGGSSES--WDPLAEAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK----KVILVGH 73 (228)
T ss_dssp EEEE-STTTTGGG--GHHHHHHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS----SEEEEEE
T ss_pred eEEECCCCCCHHH--HHHHHHHH-hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc----ccccccc
Confidence 7999999887653 56777777 6899999999999999986543 233455667777777776654 9999999
Q ss_pred cHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHh
Q 020156 194 SLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 194 SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~ 227 (330)
|+||.+++.++.++|+. |+++|+++++.....
T Consensus 74 S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~ 105 (228)
T PF12697_consen 74 SMGGMIALRLAARYPDR--VKGLVLLSPPPPLPD 105 (228)
T ss_dssp THHHHHHHHHHHHSGGG--EEEEEEESESSSHHH
T ss_pred ccccccccccccccccc--cccceeecccccccc
Confidence 99999999999999998 999999999886544
No 23
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.80 E-value=2.7e-19 Score=155.33 Aligned_cols=103 Identities=19% Similarity=0.281 Sum_probs=81.9
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
++|+||++||++++.. . +..++..+ ++||+|+++|+||||.|+.....++...+++|+.++++.+..+ +++++
T Consensus 12 ~~~~li~~hg~~~~~~-~-~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~----~v~li 84 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR-M-WDPVLPAL-TPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIE----RAVFC 84 (251)
T ss_pred CCCeEEEEcCcccchh-h-HHHHHHHh-hcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC----ceEEE
Confidence 5789999999865544 2 35665555 5799999999999999976544555566777888777776543 89999
Q ss_pred EEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
|||+||.+++.+|.++|+. ++++++++++.
T Consensus 85 G~S~Gg~~a~~~a~~~p~~--v~~li~~~~~~ 114 (251)
T TIGR02427 85 GLSLGGLIAQGLAARRPDR--VRALVLSNTAA 114 (251)
T ss_pred EeCchHHHHHHHHHHCHHH--hHHHhhccCcc
Confidence 9999999999999999888 99988887654
No 24
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.80 E-value=2.8e-19 Score=163.54 Aligned_cols=132 Identities=18% Similarity=0.274 Sum_probs=98.5
Q ss_pred EEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHH------------------------HHHHHHHHhCCcE
Q 020156 89 IRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYV------------------------RHMLLRARSKGWR 144 (330)
Q Consensus 89 ~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~------------------------~~~~~~~~~~g~~ 144 (330)
+...||..+......+++ .+.+|+++||+++.+...|+ ..+++.|.++||+
T Consensus 2 ~~~~~g~~l~~~~~~~~~-----~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKN-----AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeeccC-----CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 445688888665333332 57899999999888764443 3568889999999
Q ss_pred EEEEcCCCCCCCCCCCC-Cc---cCcChHHHHHHHHHHHHH-------------------hCC-CCcEEEEEEcHHHHHH
Q 020156 145 VVVFNSRGCGDSPVTTP-QF---YSASFLGDMQEVVAHVGS-------------------KYP-KAHLYAVGWSLGANIL 200 (330)
Q Consensus 145 v~~~d~rG~G~S~~~~~-~~---~~~~~~~D~~~~i~~l~~-------------------~~~-~~~i~lvG~SlGg~ia 200 (330)
|+++|+||||.|..... .. ...++++|+.++++.+.+ .++ +.|++++||||||.++
T Consensus 77 V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~ 156 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIA 156 (332)
T ss_pred EEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHH
Confidence 99999999999875422 21 234567888888888765 355 6699999999999999
Q ss_pred HHHHhhcCCC------CCcceEEEEcCCCCh
Q 020156 201 IRYLGHESHS------CPLSGAVSLCNPFNL 225 (330)
Q Consensus 201 ~~~a~~~~~~------~~i~~~v~~~~p~d~ 225 (330)
+.++.++++. ..++++|++++++.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i 187 (332)
T TIGR01607 157 LRLLELLGKSNENNDKLNIKGCISLSGMISI 187 (332)
T ss_pred HHHHHHhccccccccccccceEEEeccceEE
Confidence 9998765431 248888888888754
No 25
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.80 E-value=5.6e-19 Score=156.93 Aligned_cols=104 Identities=21% Similarity=0.277 Sum_probs=83.2
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-QFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~-~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
++|+||++||++++... ++.+...+ +++|+|+++|+||||.|+.+.. .++...+++|+.++++.+..+ ++++
T Consensus 27 ~~~~vv~~hG~~~~~~~--~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~----~~~l 99 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHS--WRDLMPPL-ARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGLS----PDGV 99 (278)
T ss_pred CCCeEEEEcCCCCCHHH--HHHHHHHH-hhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCCC----CceE
Confidence 46899999999775543 45666665 4579999999999999976544 455667788888887765443 8899
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
+||||||.+++.++..+|++ ++++|++++.+.
T Consensus 100 vG~S~Gg~~a~~~a~~~p~~--v~~~v~~~~~~~ 131 (278)
T TIGR03056 100 IGHSAGAAIALRLALDGPVT--PRMVVGINAALM 131 (278)
T ss_pred EEECccHHHHHHHHHhCCcc--cceEEEEcCccc
Confidence 99999999999999999988 888998887654
No 26
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.80 E-value=3.5e-18 Score=151.70 Aligned_cols=120 Identities=22% Similarity=0.364 Sum_probs=87.4
Q ss_pred CCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC---ccCcCh
Q 020156 92 KDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ---FYSASF 168 (330)
Q Consensus 92 ~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~---~~~~~~ 168 (330)
.||+.+.+....+. ..+++||++||+.|++. .++..+...+.+.||+|+++|+||+|.|...... +....+
T Consensus 9 ~~~~~~~~~~~~~~-----~~~~~vl~~hG~~g~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 82 (288)
T TIGR01250 9 VDGGYHLFTKTGGE-----GEKIKLLLLHGGPGMSH-EYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYF 82 (288)
T ss_pred CCCCeEEEEeccCC-----CCCCeEEEEcCCCCccH-HHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHH
Confidence 34555554443322 14678999999877665 3445555555556999999999999999754221 344566
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 169 LGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 169 ~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
++|+.++++.+..+ +++++||||||.+++.++..+|+. +.++|++++..
T Consensus 83 ~~~~~~~~~~~~~~----~~~liG~S~Gg~ia~~~a~~~p~~--v~~lvl~~~~~ 131 (288)
T TIGR01250 83 VDELEEVREKLGLD----KFYLLGHSWGGMLAQEYALKYGQH--LKGLIISSMLD 131 (288)
T ss_pred HHHHHHHHHHcCCC----cEEEEEeehHHHHHHHHHHhCccc--cceeeEecccc
Confidence 77777777665544 799999999999999999999988 88888877543
No 27
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.80 E-value=5.6e-19 Score=154.78 Aligned_cols=116 Identities=28% Similarity=0.510 Sum_probs=99.2
Q ss_pred EEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--CccCcChHHHHHH
Q 020156 97 VALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP--QFYSASFLGDMQE 174 (330)
Q Consensus 97 ~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~--~~~~~~~~~D~~~ 174 (330)
+.+.+.... +++.|+|+++||+.....+ ++.....+..+||+|+++|+||+|.|+.+.. .++....+.|+..
T Consensus 32 I~~h~~e~g----~~~gP~illlHGfPe~wys--wr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~ 105 (322)
T KOG4178|consen 32 IRLHYVEGG----PGDGPIVLLLHGFPESWYS--WRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVA 105 (322)
T ss_pred EEEEEEeec----CCCCCEEEEEccCCccchh--hhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHH
Confidence 555554432 3478999999999876655 5788889999999999999999999987654 4666778899999
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 175 ~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
+++.+..+ ++.++||++||.++..+|..+|++ |++.|+++.++.
T Consensus 106 lld~Lg~~----k~~lvgHDwGaivaw~la~~~Per--v~~lv~~nv~~~ 149 (322)
T KOG4178|consen 106 LLDHLGLK----KAFLVGHDWGAIVAWRLALFYPER--VDGLVTLNVPFP 149 (322)
T ss_pred HHHHhccc----eeEEEeccchhHHHHHHHHhChhh--cceEEEecCCCC
Confidence 99999966 999999999999999999999999 999999998875
No 28
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.79 E-value=4.6e-19 Score=155.04 Aligned_cols=104 Identities=25% Similarity=0.365 Sum_probs=82.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-QFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~-~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
++|+||++||+++++. ++...+..+ .+||+|+++|+||+|.|..... .+...++++|+.++++.+..+ ++++
T Consensus 12 ~~~~iv~lhG~~~~~~--~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l 84 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGS--YWAPQLDVL-TQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE----RFHF 84 (257)
T ss_pred CCCEEEEEcCCCcchh--HHHHHHHHH-HhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC----cEEE
Confidence 5789999999977654 245555544 5689999999999999976432 345566777888888776544 8999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
+||||||.+++.++.++|+. ++++|++++...
T Consensus 85 ~G~S~Gg~~a~~~a~~~~~~--v~~~i~~~~~~~ 116 (257)
T TIGR03611 85 VGHALGGLIGLQLALRYPER--LLSLVLINAWSR 116 (257)
T ss_pred EEechhHHHHHHHHHHChHH--hHHheeecCCCC
Confidence 99999999999999999987 999998876443
No 29
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.79 E-value=8.8e-19 Score=154.48 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=70.7
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
+.|+||++||+++++.. |..++..+. ..|+|+++|+||||.|+... .+. ..+.+..++ .+ ...+++++
T Consensus 12 g~~~ivllHG~~~~~~~--w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~-~~~---~~~~~~~l~-~~----~~~~~~lv 79 (256)
T PRK10349 12 GNVHLVLLHGWGLNAEV--WRCIDEELS-SHFTLHLVDLPGFGRSRGFG-ALS---LADMAEAVL-QQ----APDKAIWL 79 (256)
T ss_pred CCCeEEEECCCCCChhH--HHHHHHHHh-cCCEEEEecCCCCCCCCCCC-CCC---HHHHHHHHH-hc----CCCCeEEE
Confidence 33579999998765543 466766665 56999999999999997532 222 222222222 22 23489999
Q ss_pred EEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
||||||.+++.+|.++|+. |+++|+++++
T Consensus 80 GhS~Gg~ia~~~a~~~p~~--v~~lili~~~ 108 (256)
T PRK10349 80 GWSLGGLVASQIALTHPER--VQALVTVASS 108 (256)
T ss_pred EECHHHHHHHHHHHhChHh--hheEEEecCc
Confidence 9999999999999999998 9999998764
No 30
>PRK06489 hypothetical protein; Provisional
Probab=99.78 E-value=1.7e-18 Score=160.31 Aligned_cols=103 Identities=12% Similarity=0.238 Sum_probs=73.3
Q ss_pred CcEEEEeCCCCCCCchHHH-HHHHHHH-------HhCCcEEEEEcCCCCCCCCCCCC-------CccCcChHHHHHHHH-
Q 020156 113 SPVLILMPGLTGGSEDSYV-RHMLLRA-------RSKGWRVVVFNSRGCGDSPVTTP-------QFYSASFLGDMQEVV- 176 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~-~~~~~~~-------~~~g~~v~~~d~rG~G~S~~~~~-------~~~~~~~~~D~~~~i- 176 (330)
+|+||++||++++... |. ..+...+ ..++|+|+++|+||||.|+.+.. .+...++++|+.+.+
T Consensus 69 gpplvllHG~~~~~~~-~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKS-FLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchhh-hccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHH
Confidence 6889999999876553 21 1333333 35789999999999999975432 123334444444432
Q ss_pred HHHHHhCCCCcEE-EEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 177 AHVGSKYPKAHLY-AVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 177 ~~l~~~~~~~~i~-lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
+.+.. .++. ++||||||++++.+|.++|++ |+++|++++.
T Consensus 148 ~~lgi----~~~~~lvG~SmGG~vAl~~A~~~P~~--V~~LVLi~s~ 188 (360)
T PRK06489 148 EGLGV----KHLRLILGTSMGGMHAWMWGEKYPDF--MDALMPMASQ 188 (360)
T ss_pred HhcCC----CceeEEEEECHHHHHHHHHHHhCchh--hheeeeeccC
Confidence 33333 3774 899999999999999999999 9999998764
No 31
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.78 E-value=3.1e-18 Score=158.54 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=82.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-QFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~-~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
.+|+||++||++++... |..++..+. ++|+|+++|+||||.|+.+.. .++...+++|+.++++.+..+ ++++
T Consensus 87 ~gp~lvllHG~~~~~~~--w~~~~~~L~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~----~~~l 159 (360)
T PLN02679 87 SGPPVLLVHGFGASIPH--WRRNIGVLA-KNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQK----PTVL 159 (360)
T ss_pred CCCeEEEECCCCCCHHH--HHHHHHHHh-cCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCC----CeEE
Confidence 35789999999775543 466666664 589999999999999976532 445567888888888876554 9999
Q ss_pred EEEcHHHHHHHHHHhh-cCCCCCcceEEEEcCCC
Q 020156 191 VGWSLGANILIRYLGH-ESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~-~~~~~~i~~~v~~~~p~ 223 (330)
+||||||.+++.++.. +|++ |+++|+++++.
T Consensus 160 vGhS~Gg~ia~~~a~~~~P~r--V~~LVLi~~~~ 191 (360)
T PLN02679 160 IGNSVGSLACVIAASESTRDL--VRGLVLLNCAG 191 (360)
T ss_pred EEECHHHHHHHHHHHhcChhh--cCEEEEECCcc
Confidence 9999999999988874 6888 99999998754
No 32
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.78 E-value=1.6e-18 Score=150.12 Aligned_cols=107 Identities=20% Similarity=0.343 Sum_probs=80.5
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEE
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 192 (330)
+|+||++||++++... +..++..+. +||+|+++|+||+|.|+.+.. ....++.+.+.+++..+.+..+..+++++|
T Consensus 1 ~~~vv~~hG~~~~~~~--~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 76 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD--WQALIELLG-PHFRCLAIDLPGHGSSQSPDE-IERYDFEEAAQDILATLLDQLGIEPFFLVG 76 (251)
T ss_pred CCEEEEEcCCCCchhh--HHHHHHHhc-ccCeEEEEcCCCCCCCCCCCc-cChhhHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 3789999999876653 477777776 899999999999999975422 122233333333355555555566999999
Q ss_pred EcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 193 WSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 193 ~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
||+||.+++.++.++|+. |.+++++++....
T Consensus 77 ~S~Gg~ia~~~a~~~~~~--v~~lil~~~~~~~ 107 (251)
T TIGR03695 77 YSMGGRIALYYALQYPER--VQGLILESGSPGL 107 (251)
T ss_pred eccHHHHHHHHHHhCchh--eeeeEEecCCCCc
Confidence 999999999999999988 9999998876543
No 33
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.78 E-value=2.5e-18 Score=151.20 Aligned_cols=101 Identities=14% Similarity=0.263 Sum_probs=83.4
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
.++|+||++||+.++... +..++..+ .++|+|+++|+||||.|... ..++..++++|+.++++++..+ ++++
T Consensus 14 ~~~~~iv~lhG~~~~~~~--~~~~~~~l-~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~~l~~~----~~~l 85 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDN--LGVLARDL-VNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLDALQIE----KATF 85 (255)
T ss_pred CCCCCEEEECCCCCchhH--HHHHHHHH-hhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCC----ceEE
Confidence 467899999999776542 35566555 46799999999999999754 3456677889999999887554 8999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCcceEEEEcC
Q 020156 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCN 221 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~ 221 (330)
+||||||.+++.+|.++|++ |+++|+++.
T Consensus 86 vGhS~Gg~va~~~a~~~~~~--v~~lvli~~ 114 (255)
T PRK10673 86 IGHSMGGKAVMALTALAPDR--IDKLVAIDI 114 (255)
T ss_pred EEECHHHHHHHHHHHhCHhh--cceEEEEec
Confidence 99999999999999999998 999999864
No 34
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.78 E-value=8.5e-19 Score=151.81 Aligned_cols=98 Identities=14% Similarity=0.228 Sum_probs=71.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
++|+||++||+++++. . +..+...+. ++|+|+++|+||+|.|+... ... +.++++.+.... ..+++++
T Consensus 3 g~~~iv~~HG~~~~~~-~-~~~~~~~l~-~~~~vi~~d~~G~G~s~~~~-~~~-------~~~~~~~~~~~~-~~~~~lv 70 (245)
T TIGR01738 3 GNVHLVLIHGWGMNAE-V-FRCLDEELS-AHFTLHLVDLPGHGRSRGFG-PLS-------LADAAEAIAAQA-PDPAIWL 70 (245)
T ss_pred CCceEEEEcCCCCchh-h-HHHHHHhhc-cCeEEEEecCCcCccCCCCC-CcC-------HHHHHHHHHHhC-CCCeEEE
Confidence 3478999999966544 3 466666664 67999999999999986532 112 222222222221 2489999
Q ss_pred EEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
||||||.+++.++.++|+. ++++|++++..
T Consensus 71 G~S~Gg~~a~~~a~~~p~~--v~~~il~~~~~ 100 (245)
T TIGR01738 71 GWSLGGLVALHIAATHPDR--VRALVTVASSP 100 (245)
T ss_pred EEcHHHHHHHHHHHHCHHh--hheeeEecCCc
Confidence 9999999999999999998 99999887643
No 35
>PLN02965 Probable pheophorbidase
Probab=99.77 E-value=1.4e-18 Score=153.30 Aligned_cols=101 Identities=14% Similarity=0.190 Sum_probs=83.0
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CccCcChHHHHHHHHHHHHHhCCCCcEEEEEE
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-QFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~-~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 193 (330)
.||++||++++... |..++..|.+.||+|+++|+||||.|+.... .++...+++|+.++++.+.. ..+++++||
T Consensus 5 ~vvllHG~~~~~~~--w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGASHGAWC--WYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP---DHKVILVGH 79 (255)
T ss_pred EEEEECCCCCCcCc--HHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC---CCCEEEEec
Confidence 49999999776553 5677788878899999999999999975433 34556778888888887642 128999999
Q ss_pred cHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 194 SLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 194 SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
||||.+++.++.++|++ |+++|++++.
T Consensus 80 SmGG~ia~~~a~~~p~~--v~~lvl~~~~ 106 (255)
T PLN02965 80 SIGGGSVTEALCKFTDK--ISMAIYVAAA 106 (255)
T ss_pred CcchHHHHHHHHhCchh--eeEEEEEccc
Confidence 99999999999999998 9999988875
No 36
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.77 E-value=2.6e-18 Score=155.65 Aligned_cols=124 Identities=17% Similarity=0.297 Sum_probs=87.7
Q ss_pred ceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--C
Q 020156 85 KRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP--Q 162 (330)
Q Consensus 85 ~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~--~ 162 (330)
....+...||..+.+.-.... +.++||++||+.++... ......+...+|+|+++|+||||.|+.... .
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~------~~~~lvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~ 75 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNP------DGKPVVFLHGGPGSGTD---PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEE 75 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCC------CCCEEEEECCCCCCCCC---HHHHhccCccCCEEEEECCCCCCCCCCCCCccc
Confidence 445777778877765432211 35679999998776543 233334445789999999999999975432 1
Q ss_pred ccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 163 FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 163 ~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
....+..+|+..+++++.. .+++++||||||.+++.++.++|+. |+++|++++..
T Consensus 76 ~~~~~~~~dl~~l~~~l~~----~~~~lvG~S~GG~ia~~~a~~~p~~--v~~lvl~~~~~ 130 (306)
T TIGR01249 76 NTTWDLVADIEKLREKLGI----KNWLVFGGSWGSTLALAYAQTHPEV--VTGLVLRGIFL 130 (306)
T ss_pred CCHHHHHHHHHHHHHHcCC----CCEEEEEECHHHHHHHHHHHHChHh--hhhheeecccc
Confidence 2223445566555555543 4899999999999999999999998 99999887654
No 37
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.76 E-value=3.4e-17 Score=154.89 Aligned_cols=106 Identities=14% Similarity=0.248 Sum_probs=78.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHH---HhCCcEEEEEcCCCCCCCCCCCCC-ccCcChHHHHH-HHHHHHHHhCCCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRA---RSKGWRVVVFNSRGCGDSPVTTPQ-FYSASFLGDMQ-EVVAHVGSKYPKA 186 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~---~~~g~~v~~~d~rG~G~S~~~~~~-~~~~~~~~D~~-~~i~~l~~~~~~~ 186 (330)
.+|+||++||+.++.. .|...+...+ .+++|+|+++|+||||.|+.+... +....+++|+. .+++.+. ..
T Consensus 200 ~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg----~~ 274 (481)
T PLN03087 200 AKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERYK----VK 274 (481)
T ss_pred CCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcC----CC
Confidence 3578999999977554 2211232333 347999999999999999765322 33445556663 4555443 34
Q ss_pred cEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 187 HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 187 ~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
+++++||||||.+++.+|.++|+. |+++|+++++..
T Consensus 275 k~~LVGhSmGG~iAl~~A~~~Pe~--V~~LVLi~~~~~ 310 (481)
T PLN03087 275 SFHIVAHSLGCILALALAVKHPGA--VKSLTLLAPPYY 310 (481)
T ss_pred CEEEEEECHHHHHHHHHHHhChHh--ccEEEEECCCcc
Confidence 999999999999999999999998 999999987754
No 38
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.75 E-value=4.9e-17 Score=145.85 Aligned_cols=122 Identities=17% Similarity=0.204 Sum_probs=85.4
Q ss_pred cceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-C
Q 020156 84 LKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-Q 162 (330)
Q Consensus 84 ~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~-~ 162 (330)
+....+++ +|..+.+. ... .+|+||++||+..++.. +..++..+ .++|+|+++|+||+|.|+.+.. .
T Consensus 14 ~~~~~~~~-~~~~i~y~--~~G------~~~~iv~lHG~~~~~~~--~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~ 81 (286)
T PRK03204 14 FESRWFDS-SRGRIHYI--DEG------TGPPILLCHGNPTWSFL--YRDIIVAL-RDRFRCVAPDYLGFGLSERPSGFG 81 (286)
T ss_pred ccceEEEc-CCcEEEEE--ECC------CCCEEEEECCCCccHHH--HHHHHHHH-hCCcEEEEECCCCCCCCCCCCccc
Confidence 45555665 45555432 222 35789999998654332 35555555 5679999999999999976432 2
Q ss_pred ccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 163 FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 163 ~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
+...++.+++.++++.+. ..+++++||||||.+++.++..+|++ |+++|+++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~va~~~a~~~p~~--v~~lvl~~~~~ 136 (286)
T PRK03204 82 YQIDEHARVIGEFVDHLG----LDRYLSMGQDWGGPISMAVAVERADR--VRGVVLGNTWF 136 (286)
T ss_pred cCHHHHHHHHHHHHHHhC----CCCEEEEEECccHHHHHHHHHhChhh--eeEEEEECccc
Confidence 333445556655555543 34899999999999999999999998 99999877653
No 39
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.75 E-value=1.4e-17 Score=154.56 Aligned_cols=103 Identities=14% Similarity=0.174 Sum_probs=77.4
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
++|+||++||++++... +..+...+. ++|+|+++|+||||.|...........+++++.++++. .+..+++++
T Consensus 130 ~~~~vl~~HG~~~~~~~--~~~~~~~l~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~lv 202 (371)
T PRK14875 130 DGTPVVLIHGFGGDLNN--WLFNHAALA-AGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA----LGIERAHLV 202 (371)
T ss_pred CCCeEEEECCCCCccch--HHHHHHHHh-cCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh----cCCccEEEE
Confidence 46889999999876654 355555554 56999999999999996543333334445555555544 344489999
Q ss_pred EEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
|||+||.+++.+|..+|++ +.++|+++++.
T Consensus 203 G~S~Gg~~a~~~a~~~~~~--v~~lv~~~~~~ 232 (371)
T PRK14875 203 GHSMGGAVALRLAARAPQR--VASLTLIAPAG 232 (371)
T ss_pred eechHHHHHHHHHHhCchh--eeEEEEECcCC
Confidence 9999999999999999988 99999888764
No 40
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.75 E-value=3.6e-17 Score=151.54 Aligned_cols=104 Identities=15% Similarity=0.325 Sum_probs=86.7
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC----CccCcChHHHHHHHHHHHHHhCCCCc
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP----QFYSASFLGDMQEVVAHVGSKYPKAH 187 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~----~~~~~~~~~D~~~~i~~l~~~~~~~~ 187 (330)
++|+||++||++++... ++.++..+. ++|+|+++|+||||.|+.+.. .++...+++|+.++++.+..+ +
T Consensus 126 ~~~~ivllHG~~~~~~~--w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~----~ 198 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYS--YRKVLPVLS-KNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSD----K 198 (383)
T ss_pred CCCeEEEECCCCCCHHH--HHHHHHHHh-cCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCC----C
Confidence 46899999999765543 466766664 589999999999999986543 355677889999999888765 8
Q ss_pred EEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 188 LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 188 i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
++++|||+||.+++.+|.++|++ |+++|+++++..
T Consensus 199 ~~LvG~s~GG~ia~~~a~~~P~~--v~~lILi~~~~~ 233 (383)
T PLN03084 199 VSLVVQGYFSPPVVKYASAHPDK--IKKLILLNPPLT 233 (383)
T ss_pred ceEEEECHHHHHHHHHHHhChHh--hcEEEEECCCCc
Confidence 99999999999999999999998 999999998753
No 41
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.75 E-value=4.9e-17 Score=142.96 Aligned_cols=129 Identities=14% Similarity=0.085 Sum_probs=97.8
Q ss_pred EEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCc--hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCc
Q 020156 89 IRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSE--DSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSA 166 (330)
Q Consensus 89 ~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~--~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~ 166 (330)
++.++|..+...+.+.+. ..+|+||++||+++... ...+..++..|.++||+|+++|+||||.|..........
T Consensus 5 l~~~~g~~~~~~~~p~~~----~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~ 80 (266)
T TIGR03101 5 LDAPHGFRFCLYHPPVAV----GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWD 80 (266)
T ss_pred ecCCCCcEEEEEecCCCC----CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHH
Confidence 455556555544433321 23688999999865432 123456678888899999999999999997654444455
Q ss_pred ChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 167 SFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
.+.+|+.+++++++.. +..+++++||||||.+++.++.++|+. ++++|++++...
T Consensus 81 ~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~~--v~~lVL~~P~~~ 135 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAAK--CNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCccc--cceEEEeccccc
Confidence 7889999999999876 456899999999999999999999987 888998887654
No 42
>PRK07581 hypothetical protein; Validated
Probab=99.74 E-value=9.9e-17 Score=147.38 Aligned_cols=109 Identities=15% Similarity=0.252 Sum_probs=76.3
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHH---HHHHhCCcEEEEEcCCCCCCCCCCCC---CccCc-----ChHHHHHHHHHHHH
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHML---LRARSKGWRVVVFNSRGCGDSPVTTP---QFYSA-----SFLGDMQEVVAHVG 180 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~---~~~~~~g~~v~~~d~rG~G~S~~~~~---~~~~~-----~~~~D~~~~i~~l~ 180 (330)
+.|+||++||+++++.. +..++ ..+...+|+|+++|+||||.|+.+.. .++.. ...+|+.+....+.
T Consensus 40 ~~~~vll~~~~~~~~~~--~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (339)
T PRK07581 40 KDNAILYPTWYSGTHQD--NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT 117 (339)
T ss_pred CCCEEEEeCCCCCCccc--chhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH
Confidence 44667777777654432 22222 24545789999999999999975432 22222 35788877544444
Q ss_pred HhCCCCc-EEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 181 SKYPKAH-LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 181 ~~~~~~~-i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
+..+-.+ .+++||||||++++.+|.++|++ |+++|++++...
T Consensus 118 ~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~--V~~Lvli~~~~~ 160 (339)
T PRK07581 118 EKFGIERLALVVGWSMGAQQTYHWAVRYPDM--VERAAPIAGTAK 160 (339)
T ss_pred HHhCCCceEEEEEeCHHHHHHHHHHHHCHHH--HhhheeeecCCC
Confidence 4334448 57999999999999999999999 999999976543
No 43
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.73 E-value=3.1e-17 Score=151.40 Aligned_cols=107 Identities=17% Similarity=0.234 Sum_probs=79.9
Q ss_pred CCcEEEEeCCCCCCCchH---------HHHHHH---HHHHhCCcEEEEEcCCC--CCCCCCCC------------CCccC
Q 020156 112 DSPVLILMPGLTGGSEDS---------YVRHML---LRARSKGWRVVVFNSRG--CGDSPVTT------------PQFYS 165 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~---------~~~~~~---~~~~~~g~~v~~~d~rG--~G~S~~~~------------~~~~~ 165 (330)
.+|+||++||++++++.. +|..++ ..+..++|+|+++|+|| +|.|.... +.++.
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 457899999998866431 344443 25667899999999999 45543211 12344
Q ss_pred cChHHHHHHHHHHHHHhCCCCc-EEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 166 ASFLGDMQEVVAHVGSKYPKAH-LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 166 ~~~~~D~~~~i~~l~~~~~~~~-i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
.++++|+.++++.+... + ++++||||||.+++.++.++|+. |+++|++++...
T Consensus 110 ~~~~~~~~~~~~~l~~~----~~~~l~G~S~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~ 163 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIE----QIAAVVGGSMGGMQALEWAIDYPER--VRAIVVLATSAR 163 (351)
T ss_pred HHHHHHHHHHHHHcCCC----CceEEEEECHHHHHHHHHHHHChHh--hheEEEEccCCc
Confidence 56677777777766543 7 99999999999999999999998 999999998754
No 44
>PRK05855 short chain dehydrogenase; Validated
Probab=99.73 E-value=1.4e-16 Score=156.59 Aligned_cols=124 Identities=17% Similarity=0.238 Sum_probs=89.8
Q ss_pred EEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--Ccc
Q 020156 87 ECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP--QFY 164 (330)
Q Consensus 87 ~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~--~~~ 164 (330)
+.+...||..+.+.+..+. ++|+||++||+.+++.. +..+...+ ..||+|+++|+||||.|+.... .++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~------~~~~ivllHG~~~~~~~--w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~ 75 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDP------DRPTVVLVHGYPDNHEV--WDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYT 75 (582)
T ss_pred EEEEeeCCEEEEEEEcCCC------CCCeEEEEcCCCchHHH--HHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccC
Confidence 4455568888887655432 46899999999765542 46666666 7799999999999999976432 355
Q ss_pred CcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 165 SASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 165 ~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
..++++|+.++++.+... .+++++||||||.+++.++.+......+...+.++.+
T Consensus 76 ~~~~a~dl~~~i~~l~~~---~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~ 130 (582)
T PRK05855 76 LARLADDFAAVIDAVSPD---RPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGP 130 (582)
T ss_pred HHHHHHHHHHHHHHhCCC---CcEEEEecChHHHHHHHHHhCccchhhhhhheeccCC
Confidence 678889999999987532 2699999999999998888763221125555555544
No 45
>PLN02872 triacylglycerol lipase
Probab=99.72 E-value=1.6e-17 Score=154.21 Aligned_cols=157 Identities=21% Similarity=0.215 Sum_probs=111.7
Q ss_pred chhHHHHHhhhhcCCCCCCcceEEEEcCCCCEEEEEeecCCCCC-CCCCCcEEEEeCCCCCCCchHH----HHHHHHHHH
Q 020156 65 NCHVETIFAAFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQL-LPPDSPVLILMPGLTGGSEDSY----VRHMLLRAR 139 (330)
Q Consensus 65 ~~~~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~-~~~~~p~vv~~HG~~g~~~~~~----~~~~~~~~~ 139 (330)
..-+||++..+.++. ..+.++..++++||..+.+++++..... ....+|+|+++||+.+++..+. .+.++..|.
T Consensus 26 ~~~~~t~~~~~i~~~-gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La 104 (395)
T PLN02872 26 RSPVESLCAQLIHPA-GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILA 104 (395)
T ss_pred CCCchhhHHHHHHHc-CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHH
Confidence 345788888777654 5677889999999999999998643211 1234789999999977665311 134555678
Q ss_pred hCCcEEEEEcCCCCCCCCCC------CC---CccCcChH-HHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC
Q 020156 140 SKGWRVVVFNSRGCGDSPVT------TP---QFYSASFL-GDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESH 209 (330)
Q Consensus 140 ~~g~~v~~~d~rG~G~S~~~------~~---~~~~~~~~-~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~ 209 (330)
++||+|+++|.||++.|.+. .. .+....+. .|+.++++++....+ .+++++|||+||.+++.++ ..|+
T Consensus 105 ~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~ 182 (395)
T PLN02872 105 DHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPN 182 (395)
T ss_pred hCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChH
Confidence 89999999999999866321 11 12233444 799999999976533 5899999999999998655 4565
Q ss_pred C-CCcceEEEEcCCCC
Q 020156 210 S-CPLSGAVSLCNPFN 224 (330)
Q Consensus 210 ~-~~i~~~v~~~~p~d 224 (330)
. ..|++++++++...
T Consensus 183 ~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 183 VVEMVEAAALLCPISY 198 (395)
T ss_pred HHHHHHHHHHhcchhh
Confidence 2 23777777777643
No 46
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.72 E-value=2.5e-17 Score=160.50 Aligned_cols=133 Identities=14% Similarity=0.106 Sum_probs=105.0
Q ss_pred EEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCch--HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCc
Q 020156 89 IRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSED--SYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSA 166 (330)
Q Consensus 89 ~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~--~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~ 166 (330)
|++.||..+..+++.|.+ ..+.|+||++||+...... .+.......+.++||.|+++|+||+|.|.+...... .
T Consensus 1 i~~~DG~~L~~~~~~P~~---~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~ 76 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG---GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-S 76 (550)
T ss_pred CcCCCCCEEEEEEEecCC---CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-c
Confidence 357799999988877653 2367999999999754320 112234567889999999999999999987543333 5
Q ss_pred ChHHHHHHHHHHHHHh-CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHh
Q 020156 167 SFLGDMQEVVAHVGSK-YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~-~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~ 227 (330)
...+|+.++|+|+..+ +.+.++.++|+|+||.+++.+|.+.++. ++++|..++..+...
T Consensus 77 ~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~--l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 77 DEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPA--LRAIAPQEGVWDLYR 136 (550)
T ss_pred ccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCc--eeEEeecCcccchhH
Confidence 6789999999999876 3456999999999999999999999887 999999888877654
No 47
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.71 E-value=2e-15 Score=141.55 Aligned_cols=106 Identities=13% Similarity=0.161 Sum_probs=73.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcCh-HHHHHH-HHHHHHHhCCCCcEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASF-LGDMQE-VVAHVGSKYPKAHLY 189 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~-~~D~~~-~i~~l~~~~~~~~i~ 189 (330)
++|+||++||++++.. .| ...+..+. ++|+|+++|+||+|.|+........... .+++.+ +.+++.. .+..+++
T Consensus 104 ~~p~vvllHG~~~~~~-~~-~~~~~~L~-~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~-l~~~~~~ 179 (402)
T PLN02894 104 DAPTLVMVHGYGASQG-FF-FRNFDALA-SRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA-KNLSNFI 179 (402)
T ss_pred CCCEEEEECCCCcchh-HH-HHHHHHHH-hCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH-cCCCCeE
Confidence 5789999999966443 33 44555554 4699999999999999754322111111 112222 2233322 2444899
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 190 AVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 190 lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
++||||||.+++.+|.++|+. ++++|++++..
T Consensus 180 lvGhS~GG~la~~~a~~~p~~--v~~lvl~~p~~ 211 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPEH--VQHLILVGPAG 211 (402)
T ss_pred EEEECHHHHHHHHHHHhCchh--hcEEEEECCcc
Confidence 999999999999999999998 99999887653
No 48
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.71 E-value=1.1e-16 Score=147.32 Aligned_cols=102 Identities=13% Similarity=0.204 Sum_probs=75.9
Q ss_pred EEEEeCCCCCCCch----------HHHHHHHH---HHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHH
Q 020156 115 VLILMPGLTGGSED----------SYVRHMLL---RARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGS 181 (330)
Q Consensus 115 ~vv~~HG~~g~~~~----------~~~~~~~~---~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~ 181 (330)
++|++||+.+++.. .+|..++. .|...+|+|+++|+||+|.|.. ..+...++++|+.++++.+..
T Consensus 59 p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~--~~~~~~~~a~dl~~ll~~l~l 136 (343)
T PRK08775 59 PVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD--VPIDTADQADAIALLLDALGI 136 (343)
T ss_pred CEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC--CCCCHHHHHHHHHHHHHHcCC
Confidence 35666555454431 03455554 3545689999999999998853 234456778888888888765
Q ss_pred hCCCCc-EEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 182 KYPKAH-LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 182 ~~~~~~-i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
+ + ++++||||||++++.+|.++|++ |.++|++++...
T Consensus 137 ~----~~~~lvG~SmGG~vA~~~A~~~P~~--V~~LvLi~s~~~ 174 (343)
T PRK08775 137 A----RLHAFVGYSYGALVGLQFASRHPAR--VRTLVVVSGAHR 174 (343)
T ss_pred C----cceEEEEECHHHHHHHHHHHHChHh--hheEEEECcccc
Confidence 4 4 57999999999999999999998 999999987653
No 49
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.71 E-value=1.8e-16 Score=147.74 Aligned_cols=107 Identities=16% Similarity=0.252 Sum_probs=81.4
Q ss_pred CCcEEEEeCCCCCCCchH-----------HHHHHH---HHHHhCCcEEEEEcCCC-CCCCCCCC--------------CC
Q 020156 112 DSPVLILMPGLTGGSEDS-----------YVRHML---LRARSKGWRVVVFNSRG-CGDSPVTT--------------PQ 162 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~-----------~~~~~~---~~~~~~g~~v~~~d~rG-~G~S~~~~--------------~~ 162 (330)
.+|+||++||++++.... +|..++ ..+...+|+|+++|++| +|+|..+. +.
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 368999999998876531 234443 24546799999999998 35553321 13
Q ss_pred ccCcChHHHHHHHHHHHHHhCCCCc-EEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 163 FYSASFLGDMQEVVAHVGSKYPKAH-LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 163 ~~~~~~~~D~~~~i~~l~~~~~~~~-i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
++..++++|+.++++.+... + ++++||||||.+++.+|.++|++ |+++|++++...
T Consensus 127 ~~~~~~~~~~~~~l~~l~~~----~~~~lvG~S~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~ 183 (379)
T PRK00175 127 ITIRDWVRAQARLLDALGIT----RLAAVVGGSMGGMQALEWAIDYPDR--VRSALVIASSAR 183 (379)
T ss_pred CCHHHHHHHHHHHHHHhCCC----CceEEEEECHHHHHHHHHHHhChHh--hhEEEEECCCcc
Confidence 45567788888888887665 7 59999999999999999999998 999999987653
No 50
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.71 E-value=1.3e-15 Score=135.80 Aligned_cols=124 Identities=15% Similarity=0.132 Sum_probs=90.2
Q ss_pred CCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCc--hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChH
Q 020156 92 KDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSE--DSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFL 169 (330)
Q Consensus 92 ~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~--~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~ 169 (330)
.+|.++...+..|.+ .+++.||++||.++... ...+..+++.+.++||+|+++|+||||.|+... .....+.
T Consensus 9 ~~~~~l~g~~~~p~~----~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~ 82 (274)
T TIGR03100 9 CEGETLVGVLHIPGA----SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGID 82 (274)
T ss_pred cCCcEEEEEEEcCCC----CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHH
Confidence 456666665555542 13456777777653211 122356788889999999999999999987542 2345678
Q ss_pred HHHHHHHHHHHHhCC-CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 170 GDMQEVVAHVGSKYP-KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 170 ~D~~~~i~~l~~~~~-~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
+|+.++++++++..+ ..+++++|||+||.+++.++... .. |+++|++++++.
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~~--v~~lil~~p~~~ 135 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-LR--VAGLVLLNPWVR 135 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-CC--ccEEEEECCccC
Confidence 999999999987754 34799999999999999997653 44 999999987653
No 51
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.70 E-value=7.2e-16 Score=135.82 Aligned_cols=146 Identities=13% Similarity=0.127 Sum_probs=103.1
Q ss_pred HHHHHhhhhcCCCCCCcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEE
Q 020156 68 VETIFAAFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVV 147 (330)
Q Consensus 68 ~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~ 147 (330)
++++-...+. .-+++|..+.+...++..+..--...+ +.++.++|++||++++.. .|.+.+ +.+.+ .++|++
T Consensus 50 l~~~e~ril~-~~~v~~~~~~v~i~~~~~iw~~~~~~~----~~~~~plVliHGyGAg~g-~f~~Nf-~~La~-~~~vya 121 (365)
T KOG4409|consen 50 LKEAEKRILS-SVPVPYSKKYVRIPNGIEIWTITVSNE----SANKTPLVLIHGYGAGLG-LFFRNF-DDLAK-IRNVYA 121 (365)
T ss_pred HHHHHHhhhh-hcCCCcceeeeecCCCceeEEEeeccc----ccCCCcEEEEeccchhHH-HHHHhh-hhhhh-cCceEE
Confidence 4443333333 335778888888876655543323222 247788999999987665 444444 44444 899999
Q ss_pred EcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 148 FNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 148 ~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
+|++|.|.|+.+.-............+-|+..+.+.+-.+.+|+|||+||+++..||.++|++ |..++++++-.
T Consensus 122 iDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPer--V~kLiLvsP~G 195 (365)
T KOG4409|consen 122 IDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPER--VEKLILVSPWG 195 (365)
T ss_pred ecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHh--hceEEEecccc
Confidence 999999999875433333344456666677777776767999999999999999999999999 98888877643
No 52
>PRK10566 esterase; Provisional
Probab=99.70 E-value=1.1e-15 Score=134.24 Aligned_cols=105 Identities=13% Similarity=0.137 Sum_probs=77.7
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCc-------ChHHHHHHHHHHHHHhC-
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSA-------SFLGDMQEVVAHVGSKY- 183 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~-------~~~~D~~~~i~~l~~~~- 183 (330)
..|+||++||++++... +..++..+.++||+|+++|+||+|.+.......... ...+|+.++++++..+.
T Consensus 26 ~~p~vv~~HG~~~~~~~--~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLV--YSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCEEEEeCCCCcccch--HHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 56899999999776543 467788888999999999999999763221111111 22467778888887653
Q ss_pred -CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcC
Q 020156 184 -PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCN 221 (330)
Q Consensus 184 -~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~ 221 (330)
...+++++|||+||.+++.++..+++ +.+.+++..
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~---~~~~~~~~~ 139 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPW---VKCVASLMG 139 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCC---eeEEEEeeC
Confidence 34589999999999999999988876 556655543
No 53
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.67 E-value=4.7e-16 Score=131.98 Aligned_cols=121 Identities=14% Similarity=0.225 Sum_probs=88.5
Q ss_pred EEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHH-HhCCcEEEEEcCCCCCCCCCCCCCccCc
Q 020156 88 CIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRA-RSKGWRVVVFNSRGCGDSPVTTPQFYSA 166 (330)
Q Consensus 88 ~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~-~~~g~~v~~~d~rG~G~S~~~~~~~~~~ 166 (330)
.+.+..|..+...++.++. ...++++++||....... ...+...+ ..-+++++.+|++|+|.|.++....
T Consensus 39 ~~~t~rgn~~~~~y~~~~~----~~~~~lly~hGNa~Dlgq--~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~--- 109 (258)
T KOG1552|consen 39 KVKTSRGNEIVCMYVRPPE----AAHPTLLYSHGNAADLGQ--MVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER--- 109 (258)
T ss_pred EeecCCCCEEEEEEEcCcc----ccceEEEEcCCcccchHH--HHHHHHHHhhcccceEEEEecccccccCCCcccc---
Confidence 3445566666555554442 146899999998544332 11222222 2247999999999999998865543
Q ss_pred ChHHHHHHHHHHHHHhC-CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcC
Q 020156 167 SFLGDMQEVVAHVGSKY-PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCN 221 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~~-~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~ 221 (330)
...+|+.++.++|++.+ +..+|+++|+|+|...++.+|++.| ++++|+.++
T Consensus 110 n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~----~~alVL~SP 161 (258)
T KOG1552|consen 110 NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP----LAAVVLHSP 161 (258)
T ss_pred cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC----cceEEEecc
Confidence 66799999999999999 4779999999999999999999998 456666554
No 54
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.67 E-value=2.5e-16 Score=142.84 Aligned_cols=134 Identities=20% Similarity=0.293 Sum_probs=90.9
Q ss_pred ceEEEEcCCCC-EEEEEeecCCC---CCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhC-CcEEEEEcCCCCC-CCCC
Q 020156 85 KRECIRTKDDG-SVALDWISGDH---QLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSK-GWRVVVFNSRGCG-DSPV 158 (330)
Q Consensus 85 ~~~~~~~~dg~-~~~~~~~~~~~---~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~-g~~v~~~d~rG~G-~S~~ 158 (330)
....++.+.|. .....|..... ......+|+||++||+.++... ++..+..+.+. |+.|+++|.+|+| .|..
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~--w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~ 103 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFS--WRRVVPLLSKAKGLRVLAIDLPGHGYSSPL 103 (326)
T ss_pred cceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCccc--HhhhccccccccceEEEEEecCCCCcCCCC
Confidence 33444555554 66667776541 0001367899999999885553 56666666544 5999999999999 4444
Q ss_pred CCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEE---EEcCCCCh
Q 020156 159 TTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAV---SLCNPFNL 225 (330)
Q Consensus 159 ~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v---~~~~p~d~ 225 (330)
+....+ ...+....+..+..++...++.++|||+||.+++.+|+.+|+. |++++ +++++...
T Consensus 104 ~~~~~y---~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~--V~~lv~~~~~~~~~~~ 168 (326)
T KOG1454|consen 104 PRGPLY---TLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPET--VDSLVLLDLLGPPVYS 168 (326)
T ss_pred CCCCce---ehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCccc--ccceeeeccccccccc
Confidence 333221 2344444454444444555899999999999999999999999 99999 77776643
No 55
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.66 E-value=1.1e-15 Score=141.12 Aligned_cols=111 Identities=11% Similarity=0.143 Sum_probs=88.3
Q ss_pred CCcEEEEeCCCCCCCchH---HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChH-HHHHHHHHHHHHhCCCCc
Q 020156 112 DSPVLILMPGLTGGSEDS---YVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFL-GDMQEVVAHVGSKYPKAH 187 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~---~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~-~D~~~~i~~l~~~~~~~~ 187 (330)
.+++||++||+....... -.+.++..|.++||+|+++|+||+|.++. .....++. +|+.++++++.+..+..+
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~---~~~~~d~~~~~~~~~v~~l~~~~~~~~ 137 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR---YLTLDDYINGYIDKCVDYICRTSKLDQ 137 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh---cCCHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 345699999984322210 01578899999999999999999987653 22344555 458899999999888889
Q ss_pred EEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHh
Q 020156 188 LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 188 i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~ 227 (330)
++++||||||.+++.+++.+++. |+++|++++|+++..
T Consensus 138 i~lvGhS~GG~i~~~~~~~~~~~--v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 138 ISLLGICQGGTFSLCYAALYPDK--IKNLVTMVTPVDFET 175 (350)
T ss_pred ccEEEECHHHHHHHHHHHhCchh--eeeEEEeccccccCC
Confidence 99999999999999999999988 999999999987643
No 56
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.66 E-value=1.3e-15 Score=150.01 Aligned_cols=201 Identities=12% Similarity=0.041 Sum_probs=137.1
Q ss_pred CCCCCcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q 020156 79 LPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPV 158 (330)
Q Consensus 79 ~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~ 158 (330)
......+...+...||.++....+.|.+.+...+.|+||++||.+.......+......+..+||.|+.+|+||.++-..
T Consensus 360 ~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 360 VKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred cccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHH
Confidence 34455677788889999999888887654333446999999998754443333566778899999999999998776432
Q ss_pred CCC----CccCcChHHHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHhhHHH
Q 020156 159 TTP----QFYSASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQD 231 (330)
Q Consensus 159 ~~~----~~~~~~~~~D~~~~i~~l~~~~~---~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~~~~~ 231 (330)
... .-......+|+.++++++.+. | ..++.++|+|+||+++++.+.+.+ . ++++|+..++.+.......
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~SyGGymtl~~~~~~~-~--f~a~~~~~~~~~~~~~~~~ 515 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVDALVKL-PLVDPERIGITGGSYGGYMTLLAATKTP-R--FKAAVAVAGGVDWLLYFGE 515 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHHHHHhC-CCcChHHeEEeccChHHHHHHHHHhcCc-h--hheEEeccCcchhhhhccc
Confidence 211 122345678999999976543 4 238999999999999999999998 4 8899888876542110000
Q ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHHhCCcccccCCCC
Q 020156 232 FRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVR 311 (330)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~ 311 (330)
. ...+... ..+. ...+ ++ ..++|...|+....++|+
T Consensus 516 ~------------~~~~~~~-------------------------~~~~---~~~~-~~---~~~~~~~~sp~~~~~~i~ 551 (620)
T COG1506 516 S------------TEGLRFD-------------------------PEEN---GGGP-PE---DREKYEDRSPIFYADNIK 551 (620)
T ss_pred c------------chhhcCC-------------------------HHHh---CCCc-cc---ChHHHHhcChhhhhcccC
Confidence 0 0000000 0000 0000 00 246788899999999999
Q ss_pred cceEEEEecCCccccc
Q 020156 312 IPLLCIQVGCFYHFQR 327 (330)
Q Consensus 312 ~P~Lii~g~~D~~f~~ 327 (330)
+|+|+|||++|.-++.
T Consensus 552 ~P~LliHG~~D~~v~~ 567 (620)
T COG1506 552 TPLLLIHGEEDDRVPI 567 (620)
T ss_pred CCEEEEeecCCccCCh
Confidence 9999999999987664
No 57
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.65 E-value=1.5e-15 Score=124.59 Aligned_cols=130 Identities=17% Similarity=0.216 Sum_probs=103.5
Q ss_pred CCCCcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q 020156 80 PDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT 159 (330)
Q Consensus 80 ~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~ 159 (330)
..++|++..+.++|..++...|...+. ++|+++++||..|+.. ..+...--.....+.+|+.+++||+|.|.+.
T Consensus 50 ~n~pye~i~l~T~D~vtL~a~~~~~E~-----S~pTlLyfh~NAGNmG-hr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gs 123 (300)
T KOG4391|consen 50 FNMPYERIELRTRDKVTLDAYLMLSES-----SRPTLLYFHANAGNMG-HRLPIARVFYVNLKMNVLIVSYRGYGKSEGS 123 (300)
T ss_pred cCCCceEEEEEcCcceeEeeeeecccC-----CCceEEEEccCCCccc-chhhHHHHHHHHcCceEEEEEeeccccCCCC
Confidence 357799999999999999888888553 8899999999988765 2222222334667899999999999999875
Q ss_pred CCCccCcChHHHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEc
Q 020156 160 TPQFYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLC 220 (330)
Q Consensus 160 ~~~~~~~~~~~D~~~~i~~l~~~~--~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~ 220 (330)
... .+..-|.+++++|+..+. .+.++++.|.|+||.+|...|++..++ +.++++-.
T Consensus 124 psE---~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r--i~~~ivEN 181 (300)
T KOG4391|consen 124 PSE---EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR--ISAIIVEN 181 (300)
T ss_pred ccc---cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh--eeeeeeec
Confidence 433 466789999999998763 466999999999999999999999987 76666443
No 58
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.62 E-value=2.4e-15 Score=133.95 Aligned_cols=104 Identities=14% Similarity=0.229 Sum_probs=80.3
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC-ccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ-FYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~-~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
++|+||++||+.++... |..++..|.++||+|+++|+||||.|...... .+..++++++.++++.+. ...++++
T Consensus 17 ~~p~vvliHG~~~~~~~--w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~v~l 91 (273)
T PLN02211 17 QPPHFVLIHGISGGSWC--WYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP---ENEKVIL 91 (273)
T ss_pred CCCeEEEECCCCCCcCc--HHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC---CCCCEEE
Confidence 67899999999776653 57777788888999999999999987543222 344455555555555442 2348999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
+||||||.++..++..+|+. |+++|.+++.
T Consensus 92 vGhS~GG~v~~~~a~~~p~~--v~~lv~~~~~ 121 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPKK--ICLAVYVAAT 121 (273)
T ss_pred EEECchHHHHHHHHHhChhh--eeEEEEeccc
Confidence 99999999999999999988 9999998764
No 59
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.62 E-value=1.1e-14 Score=116.67 Aligned_cols=92 Identities=22% Similarity=0.360 Sum_probs=74.8
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHh-CCCCcEEEEEE
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK-YPKAHLYAVGW 193 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~-~~~~~i~lvG~ 193 (330)
+||++||+.++.. . +..+...+.++||.|+.+|+||+|.+. ..+++.++++.+... ....+++++||
T Consensus 1 ~vv~~HG~~~~~~-~-~~~~~~~l~~~G~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-D-YQPLAEALAEQGYAVVAFDYPGHGDSD----------GADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTTTH-H-HHHHHHHHHHTTEEEEEESCTTSTTSH----------HSHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCCHH-H-HHHHHHHHHHCCCEEEEEecCCCCccc----------hhHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 5899999987644 3 478889999999999999999999872 224777777776432 24469999999
Q ss_pred cHHHHHHHHHHhhcCCCCCcceEEEEcC
Q 020156 194 SLGANILIRYLGHESHSCPLSGAVSLCN 221 (330)
Q Consensus 194 SlGg~ia~~~a~~~~~~~~i~~~v~~~~ 221 (330)
|+||.+++.++.++ .. ++++|.+++
T Consensus 69 S~Gg~~a~~~~~~~-~~--v~~~v~~~~ 93 (145)
T PF12695_consen 69 SMGGAIAANLAARN-PR--VKAVVLLSP 93 (145)
T ss_dssp THHHHHHHHHHHHS-TT--ESEEEEESE
T ss_pred ccCcHHHHHHhhhc-cc--eeEEEEecC
Confidence 99999999999988 44 999999887
No 60
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.62 E-value=5e-16 Score=126.11 Aligned_cols=109 Identities=17% Similarity=0.260 Sum_probs=84.7
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSK-GWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~-g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
.-.|++++|..|++...| ......+.+. -+.++++|.||+|.|..+..++..+-+.+|...+++-++.- .-.++.++
T Consensus 42 ~~~iLlipGalGs~~tDf-~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fsvl 119 (277)
T KOG2984|consen 42 PNYILLIPGALGSYKTDF-PPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFSVL 119 (277)
T ss_pred CceeEecccccccccccC-CHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCeeEe
Confidence 346999999999888665 4444444333 39999999999999987777776666677777777665542 22299999
Q ss_pred EEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
|||-||..++..|+++++. |..+|++++..-.
T Consensus 120 GWSdGgiTalivAak~~e~--v~rmiiwga~ayv 151 (277)
T KOG2984|consen 120 GWSDGGITALIVAAKGKEK--VNRMIIWGAAAYV 151 (277)
T ss_pred eecCCCeEEEEeeccChhh--hhhheeeccccee
Confidence 9999999999999999999 9999999877543
No 61
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.61 E-value=2.5e-14 Score=153.72 Aligned_cols=102 Identities=20% Similarity=0.328 Sum_probs=79.6
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--------CccCcChHHHHHHHHHHHHHhC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP--------QFYSASFLGDMQEVVAHVGSKY 183 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~--------~~~~~~~~~D~~~~i~~l~~~~ 183 (330)
.+|+||++||++++... |..+...+. .+|+|+++|+||||.|+.... .+....+++|+.++++.+..+
T Consensus 1370 ~~~~vVllHG~~~s~~~--w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~- 1445 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGED--WIPIMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG- 1445 (1655)
T ss_pred CCCeEEEECCCCCCHHH--HHHHHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC-
Confidence 46889999999887653 466666664 569999999999999975321 233345566676676665443
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 184 PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 184 ~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
+++++||||||.+++.++.++|+. |+++|++++.
T Consensus 1446 ---~v~LvGhSmGG~iAl~~A~~~P~~--V~~lVlis~~ 1479 (1655)
T PLN02980 1446 ---KVTLVGYSMGARIALYMALRFSDK--IEGAVIISGS 1479 (1655)
T ss_pred ---CEEEEEECHHHHHHHHHHHhChHh--hCEEEEECCC
Confidence 899999999999999999999998 9999998764
No 62
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.60 E-value=4.4e-15 Score=127.75 Aligned_cols=78 Identities=18% Similarity=0.291 Sum_probs=61.1
Q ss_pred cEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 143 WRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 143 ~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
|+|+++|+||+|.|+.........--.+|+.+.++.+.+..+..+++++||||||.+++.||+++|++ |+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~--v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPER--VKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGG--EEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchh--hcCcEEEeee
Confidence 78999999999999831011111222466667777776666666899999999999999999999998 9999999887
No 63
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.60 E-value=2.1e-14 Score=131.28 Aligned_cols=136 Identities=19% Similarity=0.207 Sum_probs=88.7
Q ss_pred CCcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q 020156 82 VKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP 161 (330)
Q Consensus 82 ~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~ 161 (330)
...++..|+.++ .++......|+. ..+.|+||++-|+-+-.. .+++.+.+.+..+|+.++++|.||.|.|....-
T Consensus 163 ~~i~~v~iP~eg-~~I~g~LhlP~~---~~p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l 237 (411)
T PF06500_consen 163 YPIEEVEIPFEG-KTIPGYLHLPSG---EKPYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL 237 (411)
T ss_dssp SEEEEEEEEETT-CEEEEEEEESSS---SS-EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S
T ss_pred CCcEEEEEeeCC-cEEEEEEEcCCC---CCCCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCCC
Confidence 445777778776 788777666552 345688888888855443 444555567889999999999999999854221
Q ss_pred CccCcChHHHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHhh
Q 020156 162 QFYSASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIA 228 (330)
Q Consensus 162 ~~~~~~~~~D~~~~i~~l~~~~~---~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~~ 228 (330)
. .+...-..++++++... | ..+|.++|.|+||++++.+|..++++ |+++|+++++.+-..+
T Consensus 238 ~---~D~~~l~~aVLd~L~~~-p~VD~~RV~~~G~SfGGy~AvRlA~le~~R--lkavV~~Ga~vh~~ft 301 (411)
T PF06500_consen 238 T---QDSSRLHQAVLDYLASR-PWVDHTRVGAWGFSFGGYYAVRLAALEDPR--LKAVVALGAPVHHFFT 301 (411)
T ss_dssp ----S-CCHHHHHHHHHHHHS-TTEEEEEEEEEEETHHHHHHHHHHHHTTTT---SEEEEES---SCGGH
T ss_pred C---cCHHHHHHHHHHHHhcC-CccChhheEEEEeccchHHHHHHHHhcccc--eeeEeeeCchHhhhhc
Confidence 1 12223345678888764 3 33899999999999999999888888 9999999998654433
No 64
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.58 E-value=8e-15 Score=130.56 Aligned_cols=131 Identities=17% Similarity=0.108 Sum_probs=94.1
Q ss_pred CCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHH-H-H------HHHHhCCcEEEEEcCCCCCCCCCCCCCcc
Q 020156 93 DDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRH-M-L------LRARSKGWRVVVFNSRGCGDSPVTTPQFY 164 (330)
Q Consensus 93 dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~-~-~------~~~~~~g~~v~~~d~rG~G~S~~~~~~~~ 164 (330)
||..|+.+.+.| +.....+.|+||..|++..+........ . . ..+.++||.|+++|.||+|.|.+.....
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~- 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM- 78 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-
Confidence 789999998877 2223557799999999965432111011 1 1 1288999999999999999998865443
Q ss_pred CcChHHHHHHHHHHHHHh-CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHh
Q 020156 165 SASFLGDMQEVVAHVGSK-YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 165 ~~~~~~D~~~~i~~l~~~-~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~ 227 (330)
.....+|..++|+|+..+ +.+.+|.++|.|++|..++.+|++.|.. +++++..++..|...
T Consensus 79 ~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~--LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPH--LKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TT--EEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCC--ceEEEecccCCcccc
Confidence 556789999999999887 2345999999999999999999988877 999999998887654
No 65
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.55 E-value=2e-13 Score=117.03 Aligned_cols=110 Identities=14% Similarity=0.163 Sum_probs=82.1
Q ss_pred CCCcEEEEeCCCCCCCchHHH--HHHHHHHHhCCcEEEEEcCCCCCCCCCCCC------CccCcChHHHHHHHHHHHHHh
Q 020156 111 PDSPVLILMPGLTGGSEDSYV--RHMLLRARSKGWRVVVFNSRGCGDSPVTTP------QFYSASFLGDMQEVVAHVGSK 182 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~--~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~------~~~~~~~~~D~~~~i~~l~~~ 182 (330)
.+.|+||++||.+++.. .+. ..+...+.+.||.|+++|+||++.+..... .........|+.++++++..+
T Consensus 11 ~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQTAS-AYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCCCHH-HHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 36799999999876544 332 134455566899999999999876532111 011134578899999999887
Q ss_pred CC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 183 YP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 183 ~~--~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
++ ..+++++|||+||.+++.++.++|+. +.++++++++.
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~--~~~~~~~~g~~ 130 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDV--FAGGASNAGLP 130 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchh--heEEEeecCCc
Confidence 64 34899999999999999999999997 88888888664
No 66
>PRK11071 esterase YqiA; Provisional
Probab=99.55 E-value=6.7e-14 Score=117.73 Aligned_cols=91 Identities=14% Similarity=0.042 Sum_probs=65.7
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHh--CCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARS--KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~--~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
|+||++||++++........+...+.+ .+|+|+++|+||++ ..+.+++.++++ +.+..+++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~----~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVL----EHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHH----HcCCCCeEEE
Confidence 679999999887775332234444544 37999999999984 123444444444 3444599999
Q ss_pred EEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
|+||||.+++.+|.++|. .+|+++++.+
T Consensus 67 G~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~ 94 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML-----PAVVVNPAVR 94 (190)
T ss_pred EECHHHHHHHHHHHHcCC-----CEEEECCCCC
Confidence 999999999999999883 3577888766
No 67
>PRK10115 protease 2; Provisional
Probab=99.54 E-value=1.2e-13 Score=137.37 Aligned_cols=198 Identities=16% Similarity=0.191 Sum_probs=135.7
Q ss_pred CcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC
Q 020156 83 KLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ 162 (330)
Q Consensus 83 ~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~ 162 (330)
..++..++..||..+.+.++...+.....+.|+||++||..+.+....+......++++||.|+..|.||.|+-......
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~ 494 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYE 494 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHH
Confidence 34555677899999987654322111123569999999988877554445556678999999999999998876543221
Q ss_pred ----ccCcChHHHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHhhHHHHhcch
Q 020156 163 ----FYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGF 236 (330)
Q Consensus 163 ----~~~~~~~~D~~~~i~~l~~~~--~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~~~~~~~~~~ 236 (330)
..-....+|+.+++++|..+. ...++.++|.|.||.++...+.++|+. ++|+|+..+..|+......
T Consensus 495 ~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdl--f~A~v~~vp~~D~~~~~~~----- 567 (686)
T PRK10115 495 DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPEL--FHGVIAQVPFVDVVTTMLD----- 567 (686)
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhh--eeEEEecCCchhHhhhccc-----
Confidence 111245789999999998763 244899999999999999999999998 9999988887774321100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCC---CHHHHHHhCCcccccCCCCcc
Q 020156 237 NIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFK---SVDDYYSNSSSSDSIKHVRIP 313 (330)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~---~~~~yy~~~s~~~~l~~I~~P 313 (330)
. .++. ...++.. ||.. ...+|++..||...+++++.|
T Consensus 568 ---------~--------------~~p~-----------~~~~~~e------~G~p~~~~~~~~l~~~SP~~~v~~~~~P 607 (686)
T PRK10115 568 ---------E--------------SIPL-----------TTGEFEE------WGNPQDPQYYEYMKSYSPYDNVTAQAYP 607 (686)
T ss_pred ---------C--------------CCCC-----------ChhHHHH------hCCCCCHHHHHHHHHcCchhccCccCCC
Confidence 0 0000 0000000 1211 124677888999999999999
Q ss_pred -eEEEEecCCccccc
Q 020156 314 -LLCIQVGCFYHFQR 327 (330)
Q Consensus 314 -~Lii~g~~D~~f~~ 327 (330)
+|+++|++|.-++.
T Consensus 608 ~lLi~~g~~D~RV~~ 622 (686)
T PRK10115 608 HLLVTTGLHDSQVQY 622 (686)
T ss_pred ceeEEecCCCCCcCc
Confidence 56779999986653
No 68
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.52 E-value=2.1e-13 Score=130.51 Aligned_cols=111 Identities=12% Similarity=0.161 Sum_probs=84.3
Q ss_pred CCcEEEEeCCCCCCCchHHH---HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChH-HHHHHHHHHHHHhCCCCc
Q 020156 112 DSPVLILMPGLTGGSEDSYV---RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFL-GDMQEVVAHVGSKYPKAH 187 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~---~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~-~D~~~~i~~l~~~~~~~~ 187 (330)
.+++||++||+........+ +.++..|.++||+|+++|+||+|.+.... ...++. +++.++++.+.+..+..+
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~---~~ddY~~~~i~~al~~v~~~~g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK---TFDDYIRDGVIAALEVVEAITGEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC---ChhhhHHHHHHHHHHHHHHhcCCCC
Confidence 56789999998543331101 36899999999999999999999875432 233555 458889999888777779
Q ss_pred EEEEEEcHHHHHHH----HHHhhc-CCCCCcceEEEEcCCCChHh
Q 020156 188 LYAVGWSLGANILI----RYLGHE-SHSCPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 188 i~lvG~SlGg~ia~----~~a~~~-~~~~~i~~~v~~~~p~d~~~ 227 (330)
++++||||||.++. .+++.. +++ |++++.++++.|+..
T Consensus 264 v~lvG~cmGGtl~a~ala~~aa~~~~~r--v~slvll~t~~Df~~ 306 (532)
T TIGR01838 264 VNCVGYCIGGTLLSTALAYLAARGDDKR--IKSATFFTTLLDFSD 306 (532)
T ss_pred eEEEEECcCcHHHHHHHHHHHHhCCCCc--cceEEEEecCcCCCC
Confidence 99999999999863 245554 566 999999999988754
No 69
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.51 E-value=3.9e-13 Score=124.99 Aligned_cols=107 Identities=14% Similarity=0.162 Sum_probs=74.6
Q ss_pred CCcEEEEeCCCCCCCch-----------HHHHHHHH---HHHhCCcEEEEEcCCCCCCCC-------CC-----------
Q 020156 112 DSPVLILMPGLTGGSED-----------SYVRHMLL---RARSKGWRVVVFNSRGCGDSP-------VT----------- 159 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~-----------~~~~~~~~---~~~~~g~~v~~~d~rG~G~S~-------~~----------- 159 (330)
+.++||++|+++|+++. .||..++- .+--..|-||++|..|.|.|. ++
T Consensus 55 ~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~ 134 (389)
T PRK06765 55 KSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPY 134 (389)
T ss_pred CCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCcc
Confidence 56899999999996642 23343432 233345999999999976421 10
Q ss_pred ---CCCccCcChHHHHHHHHHHHHHhCCCCcEE-EEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 160 ---TPQFYSASFLGDMQEVVAHVGSKYPKAHLY-AVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 160 ---~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~-lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
.|.++..++++++..+++.+..+ ++. ++||||||++++.+|.++|+. ++++|++++...
T Consensus 135 ~~~fP~~t~~d~~~~~~~ll~~lgi~----~~~~vvG~SmGG~ial~~a~~~P~~--v~~lv~ia~~~~ 197 (389)
T PRK06765 135 GMDFPVVTILDFVRVQKELIKSLGIA----RLHAVMGPSMGGMQAQEWAVHYPHM--VERMIGVIGNPQ 197 (389)
T ss_pred CCCCCcCcHHHHHHHHHHHHHHcCCC----CceEEEEECHHHHHHHHHHHHChHh--hheEEEEecCCC
Confidence 11233344555666666555443 776 999999999999999999999 999999987653
No 70
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.49 E-value=7.7e-13 Score=108.80 Aligned_cols=111 Identities=13% Similarity=0.233 Sum_probs=90.9
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
...++|+|||+-++....++..++..+.+.|+.++.||++|.|+|............++|+..+++++... ...--+++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~-nr~v~vi~ 110 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS-NRVVPVIL 110 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC-ceEEEEEE
Confidence 56789999999888888888889999999999999999999999987654333335569999999999875 11123789
Q ss_pred EEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChH
Q 020156 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~ 226 (330)
|||-||.+++.|+..+.+ +.-++.+++-+|..
T Consensus 111 gHSkGg~Vvl~ya~K~~d---~~~viNcsGRydl~ 142 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD---IRNVINCSGRYDLK 142 (269)
T ss_pred eecCccHHHHHHHHhhcC---chheEEcccccchh
Confidence 999999999999999987 66777777777643
No 71
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.48 E-value=5.4e-13 Score=124.29 Aligned_cols=109 Identities=17% Similarity=0.221 Sum_probs=84.3
Q ss_pred CCcEEEEeCCCCCCC-chHHHHHHHHHHHh--CCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhC--CCC
Q 020156 112 DSPVLILMPGLTGGS-EDSYVRHMLLRARS--KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY--PKA 186 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~-~~~~~~~~~~~~~~--~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~--~~~ 186 (330)
.+|++|++||+.++. .+.|...++..+.. ..|+|+++|++|+|.+.......+.....+++.+++++|.... +..
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 679999999998643 34455556666653 3699999999999988654333333455678899999886543 456
Q ss_pred cEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 187 HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 187 ~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
+++++||||||.++..++...+++ |.+++.+++.
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~r--V~rItgLDPA 153 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHK--VNRITGLDPA 153 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcc--eeEEEEEcCC
Confidence 999999999999999999888887 9999988875
No 72
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.47 E-value=2.5e-13 Score=120.76 Aligned_cols=110 Identities=14% Similarity=0.132 Sum_probs=82.3
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhC--CCCcE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY--PKAHL 188 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~-~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~--~~~~i 188 (330)
.+|++|++||+.++....+...+...+++ .+|+|+++|++|++.+.............+++.++++++.+.. +..++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i 114 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENV 114 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHE
Confidence 67899999999887644555566655554 5799999999997433221111222344578888999887752 34589
Q ss_pred EEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 189 YAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 189 ~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
+++||||||.++..++.+.+++ |.+++.+.+..
T Consensus 115 ~lIGhSlGa~vAg~~a~~~~~~--v~~iv~LDPa~ 147 (275)
T cd00707 115 HLIGHSLGAHVAGFAGKRLNGK--LGRITGLDPAG 147 (275)
T ss_pred EEEEecHHHHHHHHHHHHhcCc--cceeEEecCCc
Confidence 9999999999999999999987 99999997654
No 73
>PLN02442 S-formylglutathione hydrolase
Probab=99.47 E-value=2.1e-12 Score=115.63 Aligned_cols=128 Identities=14% Similarity=0.159 Sum_probs=81.6
Q ss_pred CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHH--HHHHHHHhCCcEEEEEcCCCCCC-----CCC---C-CCC
Q 020156 94 DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVR--HMLLRARSKGWRVVVFNSRGCGD-----SPV---T-TPQ 162 (330)
Q Consensus 94 g~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~--~~~~~~~~~g~~v~~~d~rG~G~-----S~~---~-~~~ 162 (330)
|..+.+..+.|+. ....+.|+|+++||+.++.. .+.. .+...+...|+.|+.+|..++|. +.. . ...
T Consensus 29 ~~~~~~~vy~P~~-~~~~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~ 106 (283)
T PLN02442 29 GCSMTFSVYFPPA-SDSGKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAG 106 (283)
T ss_pred CCceEEEEEcCCc-ccCCCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcc
Confidence 5566666554442 22346899999999977554 3322 23355567799999999877661 110 0 000
Q ss_pred cc-------------CcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 163 FY-------------SASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 163 ~~-------------~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
.+ .....+++...++.........+++++|+||||..++.++.++|+. +.+++++++..++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~--~~~~~~~~~~~~~ 180 (283)
T PLN02442 107 FYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDK--YKSVSAFAPIANP 180 (283)
T ss_pred eeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchh--EEEEEEECCccCc
Confidence 00 0112344444444433333445899999999999999999999998 8888888887663
No 74
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.45 E-value=1.4e-12 Score=111.34 Aligned_cols=105 Identities=22% Similarity=0.358 Sum_probs=78.4
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCC-CccCcChHHHHHHHHHHHHHhCCCCcEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTP-QFYSASFLGDMQEVVAHVGSKYPKAHLY 189 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~-~g~~v~~~d~rG~G~S~~~~~-~~~~~~~~~D~~~~i~~l~~~~~~~~i~ 189 (330)
..|+++++||.+ .|.-. +..++.++.. -..+|+++|+||||++..... .+..+.+..|+.++++++-...+. +|+
T Consensus 73 ~gpil~l~HG~G-~S~LS-fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~-~ii 149 (343)
T KOG2564|consen 73 EGPILLLLHGGG-SSALS-FAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPP-QII 149 (343)
T ss_pred CccEEEEeecCc-ccchh-HHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCC-ceE
Confidence 679999999974 34433 3566666644 468899999999999986543 467778899999999988755333 799
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCcceEEEEc
Q 020156 190 AVGWSLGANILIRYLGHESHSCPLSGAVSLC 220 (330)
Q Consensus 190 lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~ 220 (330)
+|||||||.|+...|...--.. +.+++++.
T Consensus 150 lVGHSmGGaIav~~a~~k~lps-l~Gl~viD 179 (343)
T KOG2564|consen 150 LVGHSMGGAIAVHTAASKTLPS-LAGLVVID 179 (343)
T ss_pred EEeccccchhhhhhhhhhhchh-hhceEEEE
Confidence 9999999999987775443221 66777665
No 75
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.44 E-value=2.9e-12 Score=103.85 Aligned_cols=109 Identities=20% Similarity=0.348 Sum_probs=89.7
Q ss_pred CCCcEEEEeCCCC---CCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCc
Q 020156 111 PDSPVLILMPGLT---GGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAH 187 (330)
Q Consensus 111 ~~~p~vv~~HG~~---g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~ 187 (330)
..+|+.|++|.-+ |+....-+..+...+.++||.|+.||+||.|+|.++... ..+..+|+.++++|++.++|..+
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~--GiGE~~Da~aaldW~~~~hp~s~ 103 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN--GIGELEDAAAALDWLQARHPDSA 103 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC--CcchHHHHHHHHHHHHhhCCCch
Confidence 3678999998433 344444567788889999999999999999999886543 24678999999999999999887
Q ss_pred E-EEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 188 L-YAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 188 i-~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
. .+.|+|+||+|++.+|.+.++ +...+++.++.+
T Consensus 104 ~~~l~GfSFGa~Ia~~la~r~~e---~~~~is~~p~~~ 138 (210)
T COG2945 104 SCWLAGFSFGAYIAMQLAMRRPE---ILVFISILPPIN 138 (210)
T ss_pred hhhhcccchHHHHHHHHHHhccc---ccceeeccCCCC
Confidence 6 889999999999999999988 467777777765
No 76
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.43 E-value=5.6e-13 Score=125.88 Aligned_cols=142 Identities=14% Similarity=0.053 Sum_probs=110.0
Q ss_pred CCcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeC--CCCCCCc-hHHHHHHHH---HHHhCCcEEEEEcCCCCCC
Q 020156 82 VKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMP--GLTGGSE-DSYVRHMLL---RARSKGWRVVVFNSRGCGD 155 (330)
Q Consensus 82 ~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~H--G~~g~~~-~~~~~~~~~---~~~~~g~~v~~~d~rG~G~ 155 (330)
.......|++.||..++.+.+.|.+ ..+.|+++..+ .+.-... ......... .+.++||.||..|.||+|.
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~---~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~ 93 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAG---AGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGG 93 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCC---CCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccccccc
Confidence 3456678999999999999887763 24778888888 3221100 000122333 4788999999999999999
Q ss_pred CCCCCCCccCcChHHHHHHHHHHHHHh-CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHhhH
Q 020156 156 SPVTTPQFYSASFLGDMQEVVAHVGSK-YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIAD 229 (330)
Q Consensus 156 S~~~~~~~~~~~~~~D~~~~i~~l~~~-~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~~~ 229 (330)
|.+....... ...+|-.+.|+|+.++ +.+.++.++|.|++|...+.+|++.|.. +++++..++.+|.....
T Consensus 94 SeG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPa--Lkai~p~~~~~D~y~d~ 165 (563)
T COG2936 94 SEGVFDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPA--LKAIAPTEGLVDRYRDD 165 (563)
T ss_pred CCcccceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCch--heeeccccccccccccc
Confidence 9987766655 6789999999999875 5678999999999999999999999887 99999999888865443
No 77
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.42 E-value=4.9e-13 Score=117.64 Aligned_cols=106 Identities=19% Similarity=0.248 Sum_probs=87.1
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~-~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
..|+++++||+.|+... |+.+...|.+ -|-.++++|.|.||.|+...... ...+++|+..+|+..+..+...++.+
T Consensus 51 ~~Pp~i~lHGl~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~-~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHN-YEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCceEEecccccCCCC--HHHHHHHhcccccCceEEEecccCCCCccccccC-HHHHHHHHHHHHHHcccccccCCcee
Confidence 67999999999998765 5788777754 47899999999999998765443 45789999999999976555559999
Q ss_pred EEEcHHH-HHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 191 VGWSLGA-NILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 191 vG~SlGg-~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
+|||||| .+++.++...|+. +..++++..+
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~--~~rliv~D~s 158 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDL--IERLIVEDIS 158 (315)
T ss_pred cccCcchHHHHHHHHHhcCcc--cceeEEEecC
Confidence 9999999 7778888888888 8888888654
No 78
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.41 E-value=5.5e-13 Score=114.29 Aligned_cols=92 Identities=17% Similarity=0.174 Sum_probs=69.6
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCC----CccCcChHHHHHHHHHHHHHhCC--CCcEEEEEEcHHHHHHHHHHhh
Q 020156 133 HMLLRARSKGWRVVVFNSRGCGDSPVTTP----QFYSASFLGDMQEVVAHVGSKYP--KAHLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 133 ~~~~~~~~~g~~v~~~d~rG~G~S~~~~~----~~~~~~~~~D~~~~i~~l~~~~~--~~~i~lvG~SlGg~ia~~~a~~ 206 (330)
.....+.++||.|+.+|+||.++...... ........+|+.++++++.++.. ..+|.++|+|+||.+++.++.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 34556789999999999999886532211 11123457899999999988752 3489999999999999999999
Q ss_pred cCCCCCcceEEEEcCCCChH
Q 020156 207 ESHSCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 207 ~~~~~~i~~~v~~~~p~d~~ 226 (330)
+|+. ++++|..++..|+.
T Consensus 85 ~~~~--f~a~v~~~g~~d~~ 102 (213)
T PF00326_consen 85 HPDR--FKAAVAGAGVSDLF 102 (213)
T ss_dssp TCCG--SSEEEEESE-SSTT
T ss_pred ccee--eeeeeccceecchh
Confidence 9998 99999999888754
No 79
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.41 E-value=8.9e-12 Score=107.46 Aligned_cols=126 Identities=17% Similarity=0.216 Sum_probs=91.3
Q ss_pred EEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CccCcC
Q 020156 89 IRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-QFYSAS 167 (330)
Q Consensus 89 ~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~-~~~~~~ 167 (330)
+...+|..+.++-.-.+....++...+||-+||-+|+..+ ++.+...|.+.|.|++.+|+||+|.++.... .+++..
T Consensus 11 ~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~D--FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~e 88 (297)
T PF06342_consen 11 FQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHND--FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEE 88 (297)
T ss_pred cccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccc--hhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHH
Confidence 3445677776653222211123345689999999997776 6888888999999999999999999987543 344444
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 168 FLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 168 ~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
-..-+.++++.|..+ .+++.+|||.|+-.|+.++...| ..++++++++-
T Consensus 89 r~~~~~~ll~~l~i~---~~~i~~gHSrGcenal~la~~~~----~~g~~lin~~G 137 (297)
T PF06342_consen 89 RQNFVNALLDELGIK---GKLIFLGHSRGCENALQLAVTHP----LHGLVLINPPG 137 (297)
T ss_pred HHHHHHHHHHHcCCC---CceEEEEeccchHHHHHHHhcCc----cceEEEecCCc
Confidence 444455555555543 48999999999999999999985 56888887764
No 80
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.39 E-value=9.8e-12 Score=129.25 Aligned_cols=107 Identities=10% Similarity=0.146 Sum_probs=74.3
Q ss_pred CCCcEEEEeCCCCCCCchHHHHH-----HHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHH---HHh
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRH-----MLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHV---GSK 182 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~-----~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l---~~~ 182 (330)
..+++||++||+..+... |.. ++..|.++||+|+++|+ |.++..... ....+.+++..+++.+ +..
T Consensus 65 ~~~~plllvhg~~~~~~~--~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~-~~~~l~~~i~~l~~~l~~v~~~ 138 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADM--WDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGG-MERNLADHVVALSEAIDTVKDV 138 (994)
T ss_pred CCCCcEEEECCCCCCccc--eecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcC-ccCCHHHHHHHHHHHHHHHHHh
Confidence 356899999999665442 222 36788899999999996 555433221 1234555554444444 333
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHhhcC-CCCCcceEEEEcCCCChH
Q 020156 183 YPKAHLYAVGWSLGANILIRYLGHES-HSCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 183 ~~~~~i~lvG~SlGg~ia~~~a~~~~-~~~~i~~~v~~~~p~d~~ 226 (330)
. ..+++++||||||.+++.+++.++ ++ |+++|++++|.|+.
T Consensus 139 ~-~~~v~lvG~s~GG~~a~~~aa~~~~~~--v~~lvl~~~~~d~~ 180 (994)
T PRK07868 139 T-GRDVHLVGYSQGGMFCYQAAAYRRSKD--IASIVTFGSPVDTL 180 (994)
T ss_pred h-CCceEEEEEChhHHHHHHHHHhcCCCc--cceEEEEecccccC
Confidence 2 348999999999999999988654 46 99999999997753
No 81
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.33 E-value=1.1e-11 Score=117.73 Aligned_cols=108 Identities=11% Similarity=0.171 Sum_probs=88.8
Q ss_pred CCcEEEEeCCCCCCCchHHH------HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCC
Q 020156 112 DSPVLILMPGLTGGSEDSYV------RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPK 185 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~------~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 185 (330)
.+.+||++|.+. ...|+ +.+++.+.++||+|+++|+++=+... .....+++++.+.++|+.+++..+.
T Consensus 214 ~~~PLLIVPp~I---NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG~ 287 (560)
T TIGR01839 214 HARPLLVVPPQI---NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITGS 287 (560)
T ss_pred CCCcEEEechhh---hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 567799999984 22343 46899999999999999999855443 3455577788999999999998888
Q ss_pred CcEEEEEEcHHHHHHHH----HHhhcCC-CCCcceEEEEcCCCChHh
Q 020156 186 AHLYAVGWSLGANILIR----YLGHESH-SCPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 186 ~~i~lvG~SlGg~ia~~----~a~~~~~-~~~i~~~v~~~~p~d~~~ 227 (330)
.++.++|+|+||.+++. |++.+++ + |+.++.+.++.|+..
T Consensus 288 ~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~--V~sltllatplDf~~ 332 (560)
T TIGR01839 288 RDLNLLGACAGGLTCAALVGHLQALGQLRK--VNSLTYLVSLLDSTM 332 (560)
T ss_pred CCeeEEEECcchHHHHHHHHHHHhcCCCCc--eeeEEeeecccccCC
Confidence 89999999999999997 7888875 5 999999999998764
No 82
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.32 E-value=3.3e-12 Score=106.24 Aligned_cols=114 Identities=24% Similarity=0.357 Sum_probs=87.5
Q ss_pred EEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC---cc
Q 020156 88 CIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ---FY 164 (330)
Q Consensus 88 ~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~---~~ 164 (330)
.+..+||..+..+.++.++ +.+-.|++-|.+|-.. .|.+.++..+.++||.|+.+|+||.|.|...... ..
T Consensus 9 ~l~~~DG~~l~~~~~pA~~-----~~~g~~~va~a~Gv~~-~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~ 82 (281)
T COG4757 9 HLPAPDGYSLPGQRFPADG-----KASGRLVVAGATGVGQ-YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWR 82 (281)
T ss_pred ccccCCCccCccccccCCC-----CCCCcEEecccCCcch-hHhHHHHHHhhccCceEEEEecccccCCCccccccCccc
Confidence 4667899999888777664 3443555666656444 6679999999999999999999999999765433 33
Q ss_pred CcChH-HHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcC
Q 020156 165 SASFL-GDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 165 ~~~~~-~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
..+|. .|+.++|+++++..+..+.+.+|||+||.+.-. +++++
T Consensus 83 ~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL-~~~~~ 126 (281)
T COG4757 83 YLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGL-LGQHP 126 (281)
T ss_pred hhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecc-cccCc
Confidence 34554 599999999999888889999999999977654 44555
No 83
>PRK11460 putative hydrolase; Provisional
Probab=99.30 E-value=7e-11 Score=102.64 Aligned_cols=105 Identities=12% Similarity=0.075 Sum_probs=68.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC----C---CCccCcC-------hHHHHHHHHH
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT----T---PQFYSAS-------FLGDMQEVVA 177 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~----~---~~~~~~~-------~~~D~~~~i~ 177 (330)
.+|+||++||++++..+ +..+...+.+.++.+.+++.+|...+... + ....... ..+++.+.++
T Consensus 15 ~~~~vIlLHG~G~~~~~--~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVA--MGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCcEEEEEeCCCCChHH--HHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 57899999999776554 57788888877777777778875432110 0 0001111 1223444555
Q ss_pred HHHHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEc
Q 020156 178 HVGSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLC 220 (330)
Q Consensus 178 ~l~~~~~--~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~ 220 (330)
++..+++ ..+++++|||+||.+++.++...++. +.++++++
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~--~~~vv~~s 135 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGL--AGRVIAFS 135 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCc--ceEEEEec
Confidence 5555542 34899999999999999999888875 55555544
No 84
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.30 E-value=5.1e-11 Score=109.82 Aligned_cols=138 Identities=19% Similarity=0.226 Sum_probs=107.1
Q ss_pred CCcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHH----HHHHHHHHhCCcEEEEEcCCCCCCCC
Q 020156 82 VKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYV----RHMLLRARSKGWRVVVFNSRGCGDSP 157 (330)
Q Consensus 82 ~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~----~~~~~~~~~~g~~v~~~d~rG~G~S~ 157 (330)
.+.+...+++.||..+.+..++... .++|+|++.||+.++|..+.. ..++-.|..+||+|+.-|.||.-.|.
T Consensus 46 y~~E~h~V~T~DgYiL~lhRIp~~~----~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr 121 (403)
T KOG2624|consen 46 YPVEEHEVTTEDGYILTLHRIPRGK----KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSR 121 (403)
T ss_pred CceEEEEEEccCCeEEEEeeecCCC----CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccch
Confidence 4567788999999988888776542 488999999999988774322 23556678999999999999976664
Q ss_pred CCC-------C---CccCcCh-HHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC-CCcceEEEEcCCC
Q 020156 158 VTT-------P---QFYSASF-LGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS-CPLSGAVSLCNPF 223 (330)
Q Consensus 158 ~~~-------~---~~~~~~~-~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~-~~i~~~v~~~~p~ 223 (330)
.-. . .++...+ ..|+-++|+++.+..+..++..+|||.|+.+...++.+.|+. ..|+..++++|..
T Consensus 122 ~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 122 KHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred hhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 321 1 1111221 349999999999988888999999999999999999998763 3488999999876
No 85
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.29 E-value=5.6e-11 Score=107.57 Aligned_cols=132 Identities=17% Similarity=0.182 Sum_probs=85.7
Q ss_pred cceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCC-CCCCC--
Q 020156 84 LKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD-SPVTT-- 160 (330)
Q Consensus 84 ~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~-S~~~~-- 160 (330)
.....+...+|..+...+..|.+ ...+.|.||.+||.++.... + ... ..+..+||.|+.+|.||+|. +....
T Consensus 56 vy~v~f~s~~g~~V~g~l~~P~~--~~~~~Pavv~~hGyg~~~~~-~-~~~-~~~a~~G~~vl~~d~rGqg~~~~d~~~~ 130 (320)
T PF05448_consen 56 VYDVSFESFDGSRVYGWLYRPKN--AKGKLPAVVQFHGYGGRSGD-P-FDL-LPWAAAGYAVLAMDVRGQGGRSPDYRGS 130 (320)
T ss_dssp EEEEEEEEGGGEEEEEEEEEES---SSSSEEEEEEE--TT--GGG-H-HHH-HHHHHTT-EEEEE--TTTSSSS-B-SSB
T ss_pred EEEEEEEccCCCEEEEEEEecCC--CCCCcCEEEEecCCCCCCCC-c-ccc-cccccCCeEEEEecCCCCCCCCCCcccc
Confidence 34445666678888888777662 23467899999999876554 2 222 24678999999999999993 21110
Q ss_pred -----CC------------ccCcChHHHHHHHHHHHHHh--CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcC
Q 020156 161 -----PQ------------FYSASFLGDMQEVVAHVGSK--YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCN 221 (330)
Q Consensus 161 -----~~------------~~~~~~~~D~~~~i~~l~~~--~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~ 221 (330)
.. ++...+..|+..+++++... ....+|.+.|.|+||.+++.+|+..+. |++++...+
T Consensus 131 ~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r---v~~~~~~vP 207 (320)
T PF05448_consen 131 SGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR---VKAAAADVP 207 (320)
T ss_dssp SSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST----SEEEEESE
T ss_pred CCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc---ccEEEecCC
Confidence 00 11112457888999999875 224589999999999999999998875 888888876
Q ss_pred CC
Q 020156 222 PF 223 (330)
Q Consensus 222 p~ 223 (330)
-+
T Consensus 208 ~l 209 (320)
T PF05448_consen 208 FL 209 (320)
T ss_dssp SS
T ss_pred Cc
Confidence 54
No 86
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.28 E-value=1.7e-10 Score=100.10 Aligned_cols=127 Identities=17% Similarity=0.259 Sum_probs=92.9
Q ss_pred EEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCC--C-C
Q 020156 87 ECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC-GDSPVTT--P-Q 162 (330)
Q Consensus 87 ~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~-G~S~~~~--~-~ 162 (330)
..+..+| ..+...+..|.. ....|.||++|++.|-.. +++.+++.+.++||.|+++|+-+. |.+.... + .
T Consensus 5 v~~~~~~-~~~~~~~a~P~~---~~~~P~VIv~hei~Gl~~--~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~ 78 (236)
T COG0412 5 VTIPAPD-GELPAYLARPAG---AGGFPGVIVLHEIFGLNP--HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAE 78 (236)
T ss_pred eEeeCCC-ceEeEEEecCCc---CCCCCEEEEEecccCCch--HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHH
Confidence 3455566 677777777654 223389999999977443 479999999999999999999763 3222111 1 0
Q ss_pred --------ccCcChHHHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 163 --------FYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 163 --------~~~~~~~~D~~~~i~~l~~~~--~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
........|+.+++++|..+- ...+|.++|+|+||.+++.++.+.|+ ++++|+.-+.
T Consensus 79 ~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~---v~a~v~fyg~ 145 (236)
T COG0412 79 LETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE---VKAAVAFYGG 145 (236)
T ss_pred HhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC---ccEEEEecCC
Confidence 111455689999999998763 24489999999999999999998884 8899876543
No 87
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.26 E-value=6e-11 Score=102.06 Aligned_cols=105 Identities=16% Similarity=0.293 Sum_probs=74.8
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCC-CCCCCCC---cc-------CcChHHHHHHHHHHHH
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD-SPVTTPQ---FY-------SASFLGDMQEVVAHVG 180 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~-S~~~~~~---~~-------~~~~~~D~~~~i~~l~ 180 (330)
+.|.||++|++.|-. .+.+.+++.+.++||.|+++|+-+-.. ....... .. .....+|+.+++++++
T Consensus 13 ~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 578999999998754 457889999999999999999865433 1111110 00 1234578889999998
Q ss_pred HhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcC
Q 020156 181 SKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCN 221 (330)
Q Consensus 181 ~~~--~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~ 221 (330)
.+. ...+|.++|+|+||.+++.++.+. +. ++++|+..+
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~--~~a~v~~yg 130 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARD-PR--VDAAVSFYG 130 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCT-TT--SSEEEEES-
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhc-cc--cceEEEEcC
Confidence 874 345999999999999999999887 44 888888765
No 88
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.26 E-value=4.1e-11 Score=103.54 Aligned_cols=102 Identities=20% Similarity=0.360 Sum_probs=73.3
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhC--CcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSK--GWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~--g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
.|+++++||+.++... |.. ....+... .|+++++|+||||.|. .. ......+++|+..+++.+... ++.+
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~~~~~----~~~l 92 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRP-VFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDALGLE----KVVL 92 (282)
T ss_pred CCeEEEeCCCCCchhh-hHH-HHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHHhCCC----ceEE
Confidence 4589999999876653 222 11222221 1999999999999997 11 112222356666666655544 6999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
+|||+||.+++.++.++|+. +.++|+++++..
T Consensus 93 ~G~S~Gg~~~~~~~~~~p~~--~~~~v~~~~~~~ 124 (282)
T COG0596 93 VGHSMGGAVALALALRHPDR--VRGLVLIGPAPP 124 (282)
T ss_pred EEecccHHHHHHHHHhcchh--hheeeEecCCCC
Confidence 99999999999999999997 999999987653
No 89
>PLN00021 chlorophyllase
Probab=99.24 E-value=1.1e-10 Score=105.41 Aligned_cols=116 Identities=16% Similarity=0.112 Sum_probs=82.2
Q ss_pred EEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHH
Q 020156 96 SVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEV 175 (330)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~ 175 (330)
.+.+.++.|.. ....|+||++||+.+... . +..+...+.++||.|+++|++|++.+. .....+|..++
T Consensus 38 ~~p~~v~~P~~---~g~~PvVv~lHG~~~~~~-~-y~~l~~~Las~G~~VvapD~~g~~~~~-------~~~~i~d~~~~ 105 (313)
T PLN00021 38 PKPLLVATPSE---AGTYPVLLFLHGYLLYNS-F-YSQLLQHIASHGFIVVAPQLYTLAGPD-------GTDEIKDAAAV 105 (313)
T ss_pred CceEEEEeCCC---CCCCCEEEEECCCCCCcc-c-HHHHHHHHHhCCCEEEEecCCCcCCCC-------chhhHHHHHHH
Confidence 34445554432 236799999999976544 3 477888899999999999999865321 12234667777
Q ss_pred HHHHHHhC----------CCCcEEEEEEcHHHHHHHHHHhhcCCC---CCcceEEEEcCCC
Q 020156 176 VAHVGSKY----------PKAHLYAVGWSLGANILIRYLGHESHS---CPLSGAVSLCNPF 223 (330)
Q Consensus 176 i~~l~~~~----------~~~~i~lvG~SlGg~ia~~~a~~~~~~---~~i~~~v~~~~p~ 223 (330)
++|+.... ...+++++|||+||.+++.+|..+++. ..+.++|.+++..
T Consensus 106 ~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 106 INWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred HHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 77776521 124799999999999999999988753 2377888776643
No 90
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.24 E-value=9.5e-11 Score=117.53 Aligned_cols=90 Identities=11% Similarity=0.065 Sum_probs=74.1
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHh----------------CCCCcEEEEEEcHH
Q 020156 133 HMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK----------------YPKAHLYAVGWSLG 196 (330)
Q Consensus 133 ~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~----------------~~~~~i~lvG~SlG 196 (330)
.+...+.++||.|+++|.||+|+|.+.... ......+|..++|+|+..+ +.+.+|.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT-GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc-CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 355778999999999999999999886432 2345678999999999842 23569999999999
Q ss_pred HHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 197 ANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 197 g~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
|.+++.+|+..++. ++++|.+++..+.
T Consensus 349 G~~~~~aAa~~pp~--LkAIVp~a~is~~ 375 (767)
T PRK05371 349 GTLPNAVATTGVEG--LETIIPEAAISSW 375 (767)
T ss_pred HHHHHHHHhhCCCc--ceEEEeeCCCCcH
Confidence 99999999988887 9999998876553
No 91
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.24 E-value=5.4e-11 Score=117.59 Aligned_cols=95 Identities=15% Similarity=0.220 Sum_probs=73.1
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC---------CCC---c-----------cCcCh
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT---------TPQ---F-----------YSASF 168 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~---------~~~---~-----------~~~~~ 168 (330)
+.|+||++||++++... +..++..+.++||+|+++|+||||.|... ... + .....
T Consensus 448 g~P~VVllHG~~g~~~~--~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITGAKEN--ALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCCCHHH--HHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 45799999999886653 57788888889999999999999998432 110 1 12344
Q ss_pred HHHHHHHHHHHH------Hh------CCCCcEEEEEEcHHHHHHHHHHhhcC
Q 020156 169 LGDMQEVVAHVG------SK------YPKAHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 169 ~~D~~~~i~~l~------~~------~~~~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
+.|+..+...+. .. ++..+++++||||||.++..++....
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 678888888887 32 56679999999999999999997643
No 92
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.24 E-value=3.2e-11 Score=102.76 Aligned_cols=130 Identities=17% Similarity=0.205 Sum_probs=93.8
Q ss_pred eEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC----
Q 020156 86 RECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP---- 161 (330)
Q Consensus 86 ~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~---- 161 (330)
+-.++..+|..|..++..|.. .....|.||-.||++|+..+ +..+. .+...||.|+++|.||.|.|...+.
T Consensus 58 dvTf~g~~g~rI~gwlvlP~~--~~~~~P~vV~fhGY~g~~g~--~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~~p~ 132 (321)
T COG3458 58 DVTFTGYGGARIKGWLVLPRH--EKGKLPAVVQFHGYGGRGGE--WHDML-HWAVAGYAVFVMDVRGQGSSSQDTADPPG 132 (321)
T ss_pred EEEEeccCCceEEEEEEeecc--cCCccceEEEEeeccCCCCC--ccccc-cccccceeEEEEecccCCCccccCCCCCC
Confidence 444556688899888777653 12467999999999887754 33332 4467899999999999998733111
Q ss_pred -----------------CccCcChHHHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 162 -----------------QFYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 162 -----------------~~~~~~~~~D~~~~i~~l~~~~--~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
.++..+...|+..+++.+..-. ...+|.+.|.|.||.+++..++..|. |++++.+-+-
T Consensus 133 ~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~r---ik~~~~~~Pf 209 (321)
T COG3458 133 GPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPR---IKAVVADYPF 209 (321)
T ss_pred CCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChh---hhcccccccc
Confidence 1122344568888888876542 24499999999999999999998886 7888877664
Q ss_pred C
Q 020156 223 F 223 (330)
Q Consensus 223 ~ 223 (330)
+
T Consensus 210 l 210 (321)
T COG3458 210 L 210 (321)
T ss_pred c
Confidence 3
No 93
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.17 E-value=1.3e-09 Score=97.31 Aligned_cols=129 Identities=16% Similarity=0.188 Sum_probs=78.2
Q ss_pred CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHH-HHHHHHhCCcEEEEEcC--CCCCCCCCCC-------CCc
Q 020156 94 DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRH-MLLRARSKGWRVVVFNS--RGCGDSPVTT-------PQF 163 (330)
Q Consensus 94 g~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~-~~~~~~~~g~~v~~~d~--rG~G~S~~~~-------~~~ 163 (330)
+....+.++.|++. ...+.|+|+++||++++........ +...+.+.|+.|+++|. ||+|.+.... ...
T Consensus 24 ~~~~~~~v~~P~~~-~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~ 102 (275)
T TIGR02821 24 GVPMTFGVFLPPQA-AAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGF 102 (275)
T ss_pred CCceEEEEEcCCCc-cCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccc
Confidence 44555555544321 1235799999999976555321112 22333456999999998 6665433110 000
Q ss_pred c----------CcChHHHHH-HHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 164 Y----------SASFLGDMQ-EVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 164 ~----------~~~~~~D~~-~~i~~l~~~~--~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
+ ...+.+.+. ++...+...+ ...+++++|+||||++++.++.++|+. +++++++++..+.
T Consensus 103 ~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~--~~~~~~~~~~~~~ 175 (275)
T TIGR02821 103 YVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDR--FKSVSAFAPIVAP 175 (275)
T ss_pred cccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCccc--ceEEEEECCccCc
Confidence 0 012223332 3333344433 234899999999999999999999998 8888888877653
No 94
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.16 E-value=1.3e-10 Score=82.78 Aligned_cols=64 Identities=17% Similarity=0.335 Sum_probs=50.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC-ccCcChHHHHHHHHH
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ-FYSASFLGDMQEVVA 177 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~-~~~~~~~~D~~~~i~ 177 (330)
.+.+|+++||+...+. . ...++..|.++||.|+++|+||||.|++.... .....+++|+..+++
T Consensus 15 ~k~~v~i~HG~~eh~~-r-y~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSG-R-YAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCEEEEEeCCcHHHHH-H-HHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 5889999999976555 3 58899999999999999999999999864332 223456777777663
No 95
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.14 E-value=1.1e-09 Score=86.15 Aligned_cols=110 Identities=16% Similarity=0.228 Sum_probs=80.2
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCC--CCCCCccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP--VTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~--~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
.-+||+-||-+++.++..+...+..+..+||.|..|+++-..... ...|.......-...+.++..++......++++
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~ 93 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLII 93 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceee
Confidence 346888999988888888889999999999999999986443221 111111112222344455556666655559999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
-|+||||-++.+.+.+-... |+++++++=|+.
T Consensus 94 GGkSmGGR~aSmvade~~A~--i~~L~clgYPfh 125 (213)
T COG3571 94 GGKSMGGRVASMVADELQAP--IDGLVCLGYPFH 125 (213)
T ss_pred ccccccchHHHHHHHhhcCC--cceEEEecCccC
Confidence 99999999999999887766 999999987765
No 96
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.14 E-value=8.3e-10 Score=97.31 Aligned_cols=121 Identities=20% Similarity=0.334 Sum_probs=79.0
Q ss_pred CEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCc-hHHHHHHHHHHHhCCcEEEEEcCC----CCCCCCCCCCCccCcChH
Q 020156 95 GSVALDWISGDHQLLPPDSPVLILMPGLTGGSE-DSYVRHMLLRARSKGWRVVVFNSR----GCGDSPVTTPQFYSASFL 169 (330)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~-~~~~~~~~~~~~~~g~~v~~~d~r----G~G~S~~~~~~~~~~~~~ 169 (330)
...++.+..... .....||+|-|++.+.. ..|+..+++.+...||.++-+.++ |+|.+. ....+
T Consensus 19 ~~~afe~~~~~~----~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~S-------L~~D~ 87 (303)
T PF08538_consen 19 KLVAFEFTSSSS----SAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSS-------LDRDV 87 (303)
T ss_dssp TTEEEEEEEE-T----TSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHH
T ss_pred CCeEEEecCCCC----CCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcch-------hhhHH
Confidence 345666654431 14557999999987654 368889998888889999999876 444332 34668
Q ss_pred HHHHHHHHHHHHhC----CCCcEEEEEEcHHHHHHHHHHhhcCC---CCCcceEEEEcCCCChH
Q 020156 170 GDMQEVVAHVGSKY----PKAHLYAVGWSLGANILIRYLGHESH---SCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 170 ~D~~~~i~~l~~~~----~~~~i~lvG~SlGg~ia~~~a~~~~~---~~~i~~~v~~~~p~d~~ 226 (330)
+|+.++|+|++... +..+|+++|||.|..-++.|+..... ...|+++|+-++.-|-+
T Consensus 88 ~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 88 EEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp HHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TT
T ss_pred HHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChh
Confidence 99999999999883 45699999999999999999987753 35699999888876643
No 97
>PRK10162 acetyl esterase; Provisional
Probab=99.12 E-value=2.1e-09 Score=97.81 Aligned_cols=127 Identities=13% Similarity=0.112 Sum_probs=87.8
Q ss_pred ceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCC---CCCchHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCC
Q 020156 85 KRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLT---GGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTT 160 (330)
Q Consensus 85 ~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~---g~~~~~~~~~~~~~~~~-~g~~v~~~d~rG~G~S~~~~ 160 (330)
+...+...+| .+.++++.+.. ...|+||++||.+ |+.. . ...++..+.+ .|+.|+.+|||...+.+
T Consensus 58 ~~~~i~~~~g-~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~-~-~~~~~~~la~~~g~~Vv~vdYrlape~~--- 127 (318)
T PRK10162 58 RAYMVPTPYG-QVETRLYYPQP----DSQATLFYLHGGGFILGNLD-T-HDRIMRLLASYSGCTVIGIDYTLSPEAR--- 127 (318)
T ss_pred EEEEEecCCC-ceEEEEECCCC----CCCCEEEEEeCCcccCCCch-h-hhHHHHHHHHHcCCEEEEecCCCCCCCC---
Confidence 3344555555 58888877642 2468999999965 3222 2 3455666655 59999999999754322
Q ss_pred CCccCcChHHHHHHHHHHHHHh---C--CCCcEEEEEEcHHHHHHHHHHhhcCCC----CCcceEEEEcCCCCh
Q 020156 161 PQFYSASFLGDMQEVVAHVGSK---Y--PKAHLYAVGWSLGANILIRYLGHESHS----CPLSGAVSLCNPFNL 225 (330)
Q Consensus 161 ~~~~~~~~~~D~~~~i~~l~~~---~--~~~~i~lvG~SlGg~ia~~~a~~~~~~----~~i~~~v~~~~p~d~ 225 (330)
.....+|+.++++|+.+. + ...+++++|+|+||++++.++....+. ..+.+.+++++.++.
T Consensus 128 ----~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 128 ----FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ----CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 224579999999998652 3 235899999999999999988653211 238888988887765
No 98
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.11 E-value=1.8e-09 Score=96.66 Aligned_cols=114 Identities=16% Similarity=0.184 Sum_probs=75.7
Q ss_pred CCcEEEEeCCCCCCCchH---------HHHHHHH---HHHhCCcEEEEEcCCCCC-CCCCCCC---C--ccCcC----hH
Q 020156 112 DSPVLILMPGLTGGSEDS---------YVRHMLL---RARSKGWRVVVFNSRGCG-DSPVTTP---Q--FYSAS----FL 169 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~---------~~~~~~~---~~~~~g~~v~~~d~rG~G-~S~~~~~---~--~~~~~----~~ 169 (330)
....||+||+++|+++.. ||..++- .+--..|-||++|..|.+ +|..+.. . .+..+ -+
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti 129 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITI 129 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccH
Confidence 456899999999966531 3333321 122234899999999866 5654321 1 11111 13
Q ss_pred HHHHHHHHHHHHhCCCCcEE-EEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHh
Q 020156 170 GDMQEVVAHVGSKYPKAHLY-AVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 170 ~D~~~~i~~l~~~~~~~~i~-lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~ 227 (330)
+|...+-+.+.+..+-.++. +||-||||+.++.++..+|+. +..++.++.+.....
T Consensus 130 ~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~--V~~~i~ia~~~r~s~ 186 (368)
T COG2021 130 RDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDR--VRRAIPIATAARLSA 186 (368)
T ss_pred HHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHH--HhhhheecccccCCH
Confidence 44444445555555555775 999999999999999999999 999999998765433
No 99
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.06 E-value=6.5e-09 Score=96.18 Aligned_cols=109 Identities=8% Similarity=0.156 Sum_probs=83.0
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEE
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 192 (330)
.|+||++..+.|... ...+.+++.+++ |++|++.||.--+..+.....+..+++++-+.++++++ +. ++.++|
T Consensus 102 ~~pvLiV~Pl~g~~~-~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G~-~v~l~G 174 (406)
T TIGR01849 102 GPAVLIVAPMSGHYA-TLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----GP-DIHVIA 174 (406)
T ss_pred CCcEEEEcCCchHHH-HHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----CC-CCcEEE
Confidence 378999999976544 456889999999 99999999987766655455666677776666666555 22 499999
Q ss_pred EcHHHHHHHHHHhhcCCC---CCcceEEEEcCCCChHhh
Q 020156 193 WSLGANILIRYLGHESHS---CPLSGAVSLCNPFNLVIA 228 (330)
Q Consensus 193 ~SlGg~ia~~~a~~~~~~---~~i~~~v~~~~p~d~~~~ 228 (330)
+|+||..++.+++...+. ..++.++++++|.|...+
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~ 213 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARAS 213 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCC
Confidence 999999988777665322 239999999999987653
No 100
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.02 E-value=4.8e-09 Score=88.39 Aligned_cols=132 Identities=16% Similarity=0.199 Sum_probs=80.3
Q ss_pred eEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCCCCcc
Q 020156 86 RECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC-GDSPVTTPQFY 164 (330)
Q Consensus 86 ~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~-G~S~~~~~~~~ 164 (330)
...+...||..+.++-..|.. +.+...++||+.+|++-..+ .| ..++.++...||+|+.+|.-.| |.|++.-.+++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~-~~~~~~~tiliA~Gf~rrmd-h~-agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eft 80 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKN-NEPKRNNTILIAPGFARRMD-HF-AGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFT 80 (294)
T ss_dssp EEEEEETTTEEEEEEEE---T-TS---S-EEEEE-TT-GGGG-GG-HHHHHHHHTTT--EEEE---B-------------
T ss_pred cceeEcCCCCEEEEeccCCCC-CCcccCCeEEEecchhHHHH-HH-HHHHHHHhhCCeEEEeccccccccCCCCChhhcc
Confidence 356778899999987666543 45567799999999965444 34 7899999999999999999876 78888877888
Q ss_pred CcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 165 SASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 165 ~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
.....+|+..+++|+... +..++.++.-|+.|-||...|++- + +.-+|...+..++
T Consensus 81 ms~g~~sL~~V~dwl~~~-g~~~~GLIAaSLSaRIAy~Va~~i-~---lsfLitaVGVVnl 136 (294)
T PF02273_consen 81 MSIGKASLLTVIDWLATR-GIRRIGLIAASLSARIAYEVAADI-N---LSFLITAVGVVNL 136 (294)
T ss_dssp HHHHHHHHHHHHHHHHHT-T---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-H
T ss_pred hHHhHHHHHHHHHHHHhc-CCCcchhhhhhhhHHHHHHHhhcc-C---cceEEEEeeeeeH
Confidence 878889999999999954 666899999999999999999854 3 5566666666664
No 101
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.01 E-value=4.1e-09 Score=90.84 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=75.5
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHH--------hCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRAR--------SKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY 183 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~--------~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~ 183 (330)
++.+|||+||..|+... ++.+...+. ...++++.+|+...... . .........+-+.++++++.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q--~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~-~--~g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQ--VRSLASELQRKALLNDNSSHFDFFTVDFNEELSA-F--HGRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHhH--HHHHHHHHhhhhhhccCccceeEEEeccCccccc-c--ccccHHHHHHHHHHHHHHHHHhh
Confidence 45779999999876553 466655552 22588999998754211 1 11222345667777888877766
Q ss_pred -----CCCcEEEEEEcHHHHHHHHHHhhcCCC-CCcceEEEEcCCCC
Q 020156 184 -----PKAHLYAVGWSLGANILIRYLGHESHS-CPLSGAVSLCNPFN 224 (330)
Q Consensus 184 -----~~~~i~lvG~SlGg~ia~~~a~~~~~~-~~i~~~v~~~~p~d 224 (330)
+..++++|||||||.++..++...+.. ..|+.+|.+++|..
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 667999999999999998888665422 24999999999974
No 102
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.97 E-value=1.8e-08 Score=91.56 Aligned_cols=130 Identities=15% Similarity=0.105 Sum_probs=90.5
Q ss_pred EcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCC--CCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcC
Q 020156 90 RTKDDGSVALDWISGDHQLLPPDSPVLILMPGLT--GGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSAS 167 (330)
Q Consensus 90 ~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~--g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~ 167 (330)
...++..+.++++.+. .......|+||++||.+ .++.+.........+...|+.|+++|||=. ++.....
T Consensus 57 ~~~~~~~~~~~~y~p~-~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrla-------Pe~~~p~ 128 (312)
T COG0657 57 AGPSGDGVPVRVYRPD-RKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLA-------PEHPFPA 128 (312)
T ss_pred cCCCCCceeEEEECCC-CCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCC-------CCCCCCc
Confidence 3445555778887761 11233579999999975 122222223344456778999999999933 3444567
Q ss_pred hHHHHHHHHHHHHHhC-----CCCcEEEEEEcHHHHHHHHHHhhcCCC--CCcceEEEEcCCCChHh
Q 020156 168 FLGDMQEVVAHVGSKY-----PKAHLYAVGWSLGANILIRYLGHESHS--CPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 168 ~~~D~~~~i~~l~~~~-----~~~~i~lvG~SlGg~ia~~~a~~~~~~--~~i~~~v~~~~p~d~~~ 227 (330)
..+|+.++++|+.+.. ..++|.++|+|.||++++.++..-.+. ....+.+.+++..|...
T Consensus 129 ~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 129 ALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred hHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 7899999999998763 255899999999999999988665542 23678888888777654
No 103
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.96 E-value=1.6e-07 Score=81.30 Aligned_cols=127 Identities=17% Similarity=0.215 Sum_probs=90.1
Q ss_pred cceEEEEcCCCCEEEEEeec-CCCCCCCCCCcEEEEeCCCCCCCchHHHHHH----HHHHHhCCcEEEEEcCCCCCCCCC
Q 020156 84 LKRECIRTKDDGSVALDWIS-GDHQLLPPDSPVLILMPGLTGGSEDSYVRHM----LLRARSKGWRVVVFNSRGCGDSPV 158 (330)
Q Consensus 84 ~~~~~~~~~dg~~~~~~~~~-~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~----~~~~~~~g~~v~~~d~rG~G~S~~ 158 (330)
.+...|.+..| .+...... +++ ++|++|-.|.++-+..+.|...+ ...+..+ |-++-+|.||+-.-..
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~-----~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp 94 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKG-----NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAP 94 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCC-----CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCc
Confidence 45666777765 44444333 332 68899999998655444342221 3445555 9999999999965433
Q ss_pred CCC----CccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 159 TTP----QFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 159 ~~~----~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
..+ -.+.++.++++..+++++..+ .++.+|.-.|++|..++|..+|++ |.++|+++.-.
T Consensus 95 ~~p~~y~yPsmd~LAd~l~~VL~~f~lk----~vIg~GvGAGAyIL~rFAl~hp~r--V~GLvLIn~~~ 157 (326)
T KOG2931|consen 95 SFPEGYPYPSMDDLADMLPEVLDHFGLK----SVIGMGVGAGAYILARFALNHPER--VLGLVLINCDP 157 (326)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHhcCcc----eEEEecccccHHHHHHHHhcChhh--eeEEEEEecCC
Confidence 222 233456778888888888877 899999999999999999999999 99999997643
No 104
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.94 E-value=1.1e-08 Score=87.95 Aligned_cols=109 Identities=17% Similarity=0.215 Sum_probs=56.6
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHH-HHHhCCcEEEEEcCCC------CCC---CCCCCCCccC--cChHH-------H
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLL-RARSKGWRVVVFNSRG------CGD---SPVTTPQFYS--ASFLG-------D 171 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~-~~~~~g~~v~~~d~rG------~G~---S~~~~~~~~~--~~~~~-------D 171 (330)
+..++||++||+++ +.+.+ ..... ........++.++-+- .|. +=........ ....+ -
T Consensus 12 ~~~~lvi~LHG~G~-~~~~~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 12 KAKPLVILLHGYGD-SEDLF-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp T-SEEEEEE--TTS--HHHH-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCceEEEEECCCCC-Ccchh-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 47899999999944 44322 33322 2233467777776542 122 1000000000 01122 3
Q ss_pred HHHHHHHHHHh-CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 172 MQEVVAHVGSK-YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 172 ~~~~i~~l~~~-~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
+.++|+...+. .+..+|+++|+|.||++++.++.++|+. +.++|++++.+
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~--~~gvv~lsG~~ 140 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEP--LAGVVALSGYL 140 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSST--SSEEEEES---
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcC--cCEEEEeeccc
Confidence 33444433222 2455899999999999999999999998 99999988653
No 105
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.93 E-value=1.8e-08 Score=101.08 Aligned_cols=137 Identities=17% Similarity=0.201 Sum_probs=94.3
Q ss_pred EEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCc--hHHHHHH-HHHHHhCCcEEEEEcCCCCCCCCCCCC--
Q 020156 87 ECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSE--DSYVRHM-LLRARSKGWRVVVFNSRGCGDSPVTTP-- 161 (330)
Q Consensus 87 ~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~--~~~~~~~-~~~~~~~g~~v~~~d~rG~G~S~~~~~-- 161 (330)
..+.. ||....+....|.+-...++-|+||.+||.+++.. +.+.-.+ ...+...|+.|+.+|.||.|.......
T Consensus 501 ~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~ 579 (755)
T KOG2100|consen 501 GKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSA 579 (755)
T ss_pred EEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHH
Confidence 33444 77777777666654444557789999999986221 1111112 224677899999999999987754321
Q ss_pred --CccCcChHHHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 162 --QFYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 162 --~~~~~~~~~D~~~~i~~l~~~~--~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
+.-....++|...+++++.+.. ...++.++|+|.||+++++.+...+.. .++++|++++..|+
T Consensus 580 ~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~-~fkcgvavaPVtd~ 646 (755)
T KOG2100|consen 580 LPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGD-VFKCGVAVAPVTDW 646 (755)
T ss_pred hhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCc-eEEEEEEecceeee
Confidence 1111245688888888887653 234899999999999999999999743 26777999988774
No 106
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.92 E-value=1.6e-07 Score=83.37 Aligned_cols=134 Identities=20% Similarity=0.212 Sum_probs=89.5
Q ss_pred HHHHHhhhhcC----CCCCCcceEEEEcCCCCEEEEEeec-CCCCCCCCCCcEEEEeCCCCCCCchHHH-----HHHHHH
Q 020156 68 VETIFAAFFRS----LPDVKLKRECIRTKDDGSVALDWIS-GDHQLLPPDSPVLILMPGLTGGSEDSYV-----RHMLLR 137 (330)
Q Consensus 68 ~qt~~~~~~~~----~~~~~~~~~~~~~~dg~~~~~~~~~-~~~~~~~~~~p~vv~~HG~~g~~~~~~~-----~~~~~~ 137 (330)
+|..|...++. ...-.++|..+.. |+..+..-... ++ ......||++-|.++.-+..++ ..+...
T Consensus 92 l~~~~~~~~~~~~~~~~~~~~kRv~Iq~-D~~~IDt~~I~~~~----a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ 166 (365)
T PF05677_consen 92 LQEAYLAQIDNWFSDDEVSSVKRVPIQY-DGVKIDTMAIHQPE----AKPQRWILVSNGNGECYENRAMLDYKDDWIQRF 166 (365)
T ss_pred HHHHHHHHhhhhhccccccceeeEEEee-CCEEEEEEEeeCCC----CCCCcEEEEEcCChHHhhhhhhhccccHHHHHH
Confidence 55666554332 1122345656655 66555332222 22 2356789999998654443221 234455
Q ss_pred HHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhC--C-CCcEEEEEEcHHHHHHHHHHhhcCC
Q 020156 138 ARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY--P-KAHLYAVGWSLGANILIRYLGHESH 209 (330)
Q Consensus 138 ~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~--~-~~~i~lvG~SlGg~ia~~~a~~~~~ 209 (330)
+.+.|-+|++|||||.|.|.+... ..+++.|..++++|++++. + ..+|++-|||+||.++..++..+..
T Consensus 167 ak~~~aNvl~fNYpGVg~S~G~~s---~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~ 238 (365)
T PF05677_consen 167 AKELGANVLVFNYPGVGSSTGPPS---RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVL 238 (365)
T ss_pred HHHcCCcEEEECCCccccCCCCCC---HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhccc
Confidence 566799999999999999977542 3788999999999999742 2 2489999999999999987766543
No 107
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.91 E-value=3.6e-09 Score=90.31 Aligned_cols=102 Identities=16% Similarity=0.154 Sum_probs=73.1
Q ss_pred EEEeCCCCCC--CchHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHh-----CCCCc
Q 020156 116 LILMPGLTGG--SEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK-----YPKAH 187 (330)
Q Consensus 116 vv~~HG~~g~--~~~~~~~~~~~~~~~-~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~-----~~~~~ 187 (330)
||++||.+-. ..+.. ..++..+.+ .|+.|+++|||=. ++.......+|+.++++|+.+. +...+
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~-------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLA-------PEAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---T-------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeecccc-------ccccccccccccccceeeeccccccccccccc
Confidence 7899987622 22222 455566554 8999999999932 3444567889999999999887 55669
Q ss_pred EEEEEEcHHHHHHHHHHhhcCCC--CCcceEEEEcCCCCh
Q 020156 188 LYAVGWSLGANILIRYLGHESHS--CPLSGAVSLCNPFNL 225 (330)
Q Consensus 188 i~lvG~SlGg~ia~~~a~~~~~~--~~i~~~v~~~~p~d~ 225 (330)
|+++|+|.||++++.++....+. ..+++++++++..|+
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999998755443 248899999998766
No 108
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.86 E-value=2e-08 Score=90.91 Aligned_cols=127 Identities=15% Similarity=0.162 Sum_probs=73.3
Q ss_pred cCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchH-------------H---HHHHHHHHHhCCcEEEEEcCCCCC
Q 020156 91 TKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDS-------------Y---VRHMLLRARSKGWRVVVFNSRGCG 154 (330)
Q Consensus 91 ~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~-------------~---~~~~~~~~~~~g~~v~~~d~rG~G 154 (330)
..++..+......|++ ...+.|.||++||-+++.... + -..+...+.++||-|+++|.+|+|
T Consensus 95 ~~p~~~vpaylLvPd~--~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~G 172 (390)
T PF12715_consen 95 TTPGSRVPAYLLVPDG--AKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFG 172 (390)
T ss_dssp -STTB-EEEEEEEETT----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSG
T ss_pred ccCCeeEEEEEEecCC--CCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccccc
Confidence 3456666666555553 234678899999975443210 0 123567899999999999999999
Q ss_pred CCCCCCCCc--cCcC------------------hHHHHHHHHHHHHHh--CCCCcEEEEEEcHHHHHHHHHHhhcCCCCC
Q 020156 155 DSPVTTPQF--YSAS------------------FLGDMQEVVAHVGSK--YPKAHLYAVGWSLGANILIRYLGHESHSCP 212 (330)
Q Consensus 155 ~S~~~~~~~--~~~~------------------~~~D~~~~i~~l~~~--~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~ 212 (330)
+........ ...+ .+.|...+++||... ....+|.++|+||||..++.+++..+.
T Consensus 173 ER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdR--- 249 (390)
T PF12715_consen 173 ERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDR--- 249 (390)
T ss_dssp GG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT---
T ss_pred ccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchh---
Confidence 864322110 0000 122555588888765 123489999999999999999988765
Q ss_pred cceEEEEcCC
Q 020156 213 LSGAVSLCNP 222 (330)
Q Consensus 213 i~~~v~~~~p 222 (330)
|+++|+.+-.
T Consensus 250 Ika~v~~~~l 259 (390)
T PF12715_consen 250 IKATVANGYL 259 (390)
T ss_dssp --EEEEES-B
T ss_pred hHhHhhhhhh
Confidence 8888877654
No 109
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.82 E-value=4.7e-08 Score=86.57 Aligned_cols=109 Identities=17% Similarity=0.298 Sum_probs=81.4
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHh---CCcEEEEEcCCCCCCCCCC------CCCccCcChHHHHHHHHHHHHHhC
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARS---KGWRVVVFNSRGCGDSPVT------TPQFYSASFLGDMQEVVAHVGSKY 183 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~---~g~~v~~~d~rG~G~S~~~------~~~~~~~~~~~D~~~~i~~l~~~~ 183 (330)
++.+++++|.+|-. .|...+...+.+ ..|.|+++.+.||-.++.. ...++..++++-..++++.+...+
T Consensus 2 ~~li~~IPGNPGlv--~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~ 79 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV--EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQK 79 (266)
T ss_pred cEEEEEECCCCChH--HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhh
Confidence 46799999998844 344777777764 4799999999999877654 123444555555666666655544
Q ss_pred --CCCcEEEEEEcHHHHHHHHHHhhcC-CCCCcceEEEEcCCC
Q 020156 184 --PKAHLYAVGWSLGANILIRYLGHES-HSCPLSGAVSLCNPF 223 (330)
Q Consensus 184 --~~~~i~lvG~SlGg~ia~~~a~~~~-~~~~i~~~v~~~~p~ 223 (330)
++.+++++|||.|++|++..+.+.+ ....|..++.+.|..
T Consensus 80 ~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 80 NKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred cCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 5679999999999999999999999 223499999998875
No 110
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.81 E-value=4e-09 Score=89.90 Aligned_cols=90 Identities=17% Similarity=0.218 Sum_probs=57.6
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcE---EEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWR---VVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~---v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
+|||+||..++.... |..+...|.++||. +++++|-...............+.+.+++++|+.++...+. +|.+|
T Consensus 3 PVVlVHG~~~~~~~~-w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSN-WSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp -EEEE--TTTTTCGG-CCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CEEEECCCCcchhhC-HHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 599999998755544 47888899999999 79999944332111100111234457899999999887777 99999
Q ss_pred EEcHHHHHHHHHHhh
Q 020156 192 GWSLGANILIRYLGH 206 (330)
Q Consensus 192 G~SlGg~ia~~~a~~ 206 (330)
||||||.++-.|+.-
T Consensus 81 gHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 81 GHSMGGTIARYYIKG 95 (219)
T ss_dssp EETCHHHHHHHHHHH
T ss_pred EcCCcCHHHHHHHHH
Confidence 999999999888753
No 111
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.77 E-value=8e-08 Score=83.31 Aligned_cols=103 Identities=18% Similarity=0.211 Sum_probs=77.8
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhC----C---
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY----P--- 184 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~----~--- 184 (330)
..|+||++||+. ...+.| ..+...+.++||-|+.+|+...+. .......+++.++++|+.+.. +
T Consensus 16 ~yPVv~f~~G~~-~~~s~Y-s~ll~hvAShGyIVV~~d~~~~~~-------~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v 86 (259)
T PF12740_consen 16 TYPVVLFLHGFL-LINSWY-SQLLEHVASHGYIVVAPDLYSIGG-------PDDTDEVASAAEVIDWLAKGLESKLPLGV 86 (259)
T ss_pred CcCEEEEeCCcC-CCHHHH-HHHHHHHHhCceEEEEecccccCC-------CCcchhHHHHHHHHHHHHhcchhhccccc
Confidence 689999999996 444444 888999999999999999765432 122356788899999987632 1
Q ss_pred ---CCcEEEEEEcHHHHHHHHHHhhcCC---CCCcceEEEEcCCC
Q 020156 185 ---KAHLYAVGWSLGANILIRYLGHESH---SCPLSGAVSLCNPF 223 (330)
Q Consensus 185 ---~~~i~lvG~SlGg~ia~~~a~~~~~---~~~i~~~v~~~~p~ 223 (330)
-.++.++|||-||-++..++...-+ ...+++++.+.+.-
T Consensus 87 ~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 87 KPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 2389999999999999998887722 12388888887653
No 112
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.77 E-value=6.1e-08 Score=84.82 Aligned_cols=126 Identities=16% Similarity=0.234 Sum_probs=77.2
Q ss_pred EEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHH----HHHHHhCCcEEEEEcCCCCCCCCCCCCC
Q 020156 87 ECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHM----LLRARSKGWRVVVFNSRGCGDSPVTTPQ 162 (330)
Q Consensus 87 ~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~----~~~~~~~g~~v~~~d~rG~G~S~~~~~~ 162 (330)
+.++++-| .+........ ..++|++|-.|=++-+..+.| ..+ ......+.|.++=+|.||+..-....+.
T Consensus 2 h~v~t~~G-~v~V~v~G~~----~~~kp~ilT~HDvGlNh~scF-~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~ 75 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDP----KGNKPAILTYHDVGLNHKSCF-QGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPE 75 (283)
T ss_dssp EEEEETTE-EEEEEEESS------TTS-EEEEE--TT--HHHHC-HHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----T
T ss_pred ceeccCce-EEEEEEEecC----CCCCceEEEeccccccchHHH-HHHhcchhHHHHhhceEEEEEeCCCCCCCcccccc
Confidence 34566655 4444433322 126999999998743333222 222 2233456799999999999764433222
Q ss_pred ----ccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 163 ----FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 163 ----~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
.+.++.++++.+++++++.+ .++.+|--.||+|...+|..+|++ |.++|++++...
T Consensus 76 ~y~yPsmd~LAe~l~~Vl~~f~lk----~vIg~GvGAGAnIL~rfAl~~p~~--V~GLiLvn~~~~ 135 (283)
T PF03096_consen 76 GYQYPSMDQLAEMLPEVLDHFGLK----SVIGFGVGAGANILARFALKHPER--VLGLILVNPTCT 135 (283)
T ss_dssp T-----HHHHHCTHHHHHHHHT-------EEEEEETHHHHHHHHHHHHSGGG--EEEEEEES---S
T ss_pred cccccCHHHHHHHHHHHHHhCCcc----EEEEEeeccchhhhhhccccCccc--eeEEEEEecCCC
Confidence 33456778888888998888 899999999999999999999999 999999987653
No 113
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.76 E-value=7e-09 Score=94.30 Aligned_cols=114 Identities=16% Similarity=0.210 Sum_probs=69.4
Q ss_pred CCCCcEEEEeCCCCCCC-chHHHHHHHHHHHhC---CcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHh--C
Q 020156 110 PPDSPVLILMPGLTGGS-EDSYVRHMLLRARSK---GWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK--Y 183 (330)
Q Consensus 110 ~~~~p~vv~~HG~~g~~-~~~~~~~~~~~~~~~---g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~--~ 183 (330)
...+|++|++||+.++. .+.++..+...++++ +++|+++||...................+.+..+|+.|... .
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 34789999999999887 566778888877664 79999999964322100000000112234555666666633 3
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 184 PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 184 ~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
+..++++|||||||.||-.++........|..+..+.|..
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 4559999999999999998877766612288888887654
No 114
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.76 E-value=3.8e-08 Score=86.74 Aligned_cols=131 Identities=18% Similarity=0.236 Sum_probs=91.2
Q ss_pred CcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC
Q 020156 83 KLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ 162 (330)
Q Consensus 83 ~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~ 162 (330)
.-+|-.+...||.++..-+........+.+...||++-|..|--+ -.....-.+.||.|+.+|+||+++|.+..-.
T Consensus 213 NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE----vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p 288 (517)
T KOG1553|consen 213 NGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE----VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYP 288 (517)
T ss_pred CCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceE----eeeecChHHhCceeeccCCCCccccCCCCCc
Confidence 457888999999988776665443233445667788888766433 2233344567999999999999999875322
Q ss_pred ccCcChHHHHHHHHHHHHHh--CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 163 FYSASFLGDMQEVVAHVGSK--YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 163 ~~~~~~~~D~~~~i~~l~~~--~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
. ....-+.+++++.-.. ++...|++.|||.||.-++.+|..+|+ |++ |++.+.+|
T Consensus 289 ~---n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd---Vka-vvLDAtFD 345 (517)
T KOG1553|consen 289 V---NTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD---VKA-VVLDATFD 345 (517)
T ss_pred c---cchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC---ceE-EEeecchh
Confidence 1 1223334456655443 566789999999999999999999998 554 55666665
No 115
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.75 E-value=4.2e-08 Score=89.18 Aligned_cols=112 Identities=14% Similarity=0.178 Sum_probs=85.7
Q ss_pred CCcEEEEeCCCCCCCc---hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChH-HHHHHHHHHHHHhCCCCc
Q 020156 112 DSPVLILMPGLTGGSE---DSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFL-GDMQEVVAHVGSKYPKAH 187 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~---~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~-~D~~~~i~~l~~~~~~~~ 187 (330)
.+++++++|.+.-.-. -..-+.++..++++|..|+++++++=..+.. ....+++. +++.++++.+.+..+..+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg~~~ 182 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITGQKD 182 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhCccc
Confidence 4567899998753111 0012467888999999999999986444332 33345555 788889999988877779
Q ss_pred EEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHh
Q 020156 188 LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 188 i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~ 227 (330)
|.++|+|.||+++..+++..+.+ +|+.++.+.+++|+..
T Consensus 183 InliGyCvGGtl~~~ala~~~~k-~I~S~T~lts~~DF~~ 221 (445)
T COG3243 183 INLIGYCVGGTLLAAALALMAAK-RIKSLTLLTSPVDFSH 221 (445)
T ss_pred cceeeEecchHHHHHHHHhhhhc-ccccceeeecchhhcc
Confidence 99999999999999999988876 6999999999988765
No 116
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.74 E-value=1e-07 Score=82.28 Aligned_cols=103 Identities=18% Similarity=0.254 Sum_probs=73.3
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEE
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 193 (330)
++|+++|+.+|+.. .| ..++..+....+.|+.++++|.+... .+. ....+-+...++.++...+..++.++||
T Consensus 1 ~~lf~~p~~gG~~~-~y-~~la~~l~~~~~~v~~i~~~~~~~~~--~~~---~si~~la~~y~~~I~~~~~~gp~~L~G~ 73 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SY-RPLARALPDDVIGVYGIEYPGRGDDE--PPP---DSIEELASRYAEAIRARQPEGPYVLAGW 73 (229)
T ss_dssp -EEEEESSTTCSGG-GG-HHHHHHHTTTEEEEEEECSTTSCTTS--HEE---SSHHHHHHHHHHHHHHHTSSSSEEEEEE
T ss_pred CeEEEEcCCccCHH-HH-HHHHHhCCCCeEEEEEEecCCCCCCC--CCC---CCHHHHHHHHHHHhhhhCCCCCeeehcc
Confidence 36999999987555 44 78877775546999999999987221 111 2333444556677777777779999999
Q ss_pred cHHHHHHHHHHhhcCCC-CCcceEEEEcCCC
Q 020156 194 SLGANILIRYLGHESHS-CPLSGAVSLCNPF 223 (330)
Q Consensus 194 SlGg~ia~~~a~~~~~~-~~i~~~v~~~~p~ 223 (330)
|+||.+|...|.+-.+. ..+..+++++++.
T Consensus 74 S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 74 SFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp THHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred CccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 99999999998665332 2288888888653
No 117
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.74 E-value=3.2e-07 Score=76.53 Aligned_cols=91 Identities=10% Similarity=0.086 Sum_probs=60.7
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCc--EEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEE
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGW--RVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~--~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 193 (330)
++++||+.++..+.=...+.+.+.+.+. .+..+|++ ...+++.+.++.+.++.....+.++|.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~---------------~~p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP---------------PFPEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC---------------cCHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 7999999887665433455556666553 45555543 122444444555544445446999999
Q ss_pred cHHHHHHHHHHhhcCCCCCcceEEEEcCCCChH
Q 020156 194 SLGANILIRYLGHESHSCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 194 SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~ 226 (330)
||||+.|..++.+++ +++ |+++|.+.+.
T Consensus 67 SlGG~~A~~La~~~~----~~a-vLiNPav~p~ 94 (187)
T PF05728_consen 67 SLGGFYATYLAERYG----LPA-VLINPAVRPY 94 (187)
T ss_pred ChHHHHHHHHHHHhC----CCE-EEEcCCCCHH
Confidence 999999999998886 334 8888877643
No 118
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.71 E-value=5.4e-08 Score=91.53 Aligned_cols=96 Identities=11% Similarity=0.131 Sum_probs=78.4
Q ss_pred hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhc
Q 020156 128 DSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 128 ~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~ 207 (330)
..|+..+++.|.+.||.+ ..|++|+|.+-.... ....+.+++.+.|+.+.+.++..+++++||||||.++..++..+
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~--~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSN--RLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCcccCCCCccccc--cHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC
Confidence 366789999999999866 789999998754321 12456789999999998888888999999999999999999888
Q ss_pred CCC--CCcceEEEEcCCCChH
Q 020156 208 SHS--CPLSGAVSLCNPFNLV 226 (330)
Q Consensus 208 ~~~--~~i~~~v~~~~p~d~~ 226 (330)
++. ..|+..|++++|++-.
T Consensus 184 p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CHhHHhHhccEEEECCCCCCC
Confidence 763 3488999999998643
No 119
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.71 E-value=4.2e-07 Score=81.49 Aligned_cols=99 Identities=19% Similarity=0.190 Sum_probs=66.2
Q ss_pred HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhC------CCCcEEEEEEcHHHHHHHHH
Q 020156 130 YVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY------PKAHLYAVGWSLGANILIRY 203 (330)
Q Consensus 130 ~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~------~~~~i~lvG~SlGg~ia~~~ 203 (330)
+-..++..++++||.|++.||.|.|. +.. .......++.+.|+..+... .+.++.++|+|.||..++..
T Consensus 14 ~e~~~l~~~L~~GyaVv~pDY~Glg~-~y~----~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~A 88 (290)
T PF03583_consen 14 YEAPFLAAWLARGYAVVAPDYEGLGT-PYL----NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWA 88 (290)
T ss_pred hHHHHHHHHHHCCCEEEecCCCCCCC-ccc----CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHH
Confidence 44567788899999999999999987 111 11223344444454444322 24589999999999998776
Q ss_pred HhhcCCC---CC--cceEEEEcCCCChHhhHHHHh
Q 020156 204 LGHESHS---CP--LSGAVSLCNPFNLVIADQDFR 233 (330)
Q Consensus 204 a~~~~~~---~~--i~~~v~~~~p~d~~~~~~~~~ 233 (330)
+...++. -. |.++++.++|.|+........
T Consensus 89 A~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~ 123 (290)
T PF03583_consen 89 AELAPSYAPELNRDLVGAAAGGPPADLAALLRALN 123 (290)
T ss_pred HHHhHHhCcccccceeEEeccCCccCHHHHHhccC
Confidence 6444332 23 788888888888776554443
No 120
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.69 E-value=3.6e-07 Score=78.08 Aligned_cols=108 Identities=14% Similarity=0.159 Sum_probs=74.0
Q ss_pred CCcEEEEeCCCCCCCchHHHH--HHHHHHHhCCcEEEEEcCCCCCCCCCCC-----CCccCcChHHHHHHHHHHHHHhCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVR--HMLLRARSKGWRVVVFNSRGCGDSPVTT-----PQFYSASFLGDMQEVVAHVGSKYP 184 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~--~~~~~~~~~g~~v~~~d~rG~G~S~~~~-----~~~~~~~~~~D~~~~i~~l~~~~~ 184 (330)
+.|.||++||..++.. .+.. .+.....++||-|+.++..........+ ......+....+.++|+++..+++
T Consensus 15 ~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 5699999999876544 3333 2334456679999988854221111111 011112345678888999988875
Q ss_pred --CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 185 --KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 185 --~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
..+|++.|+|.||+++..++..+|+. +.++.+++..
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd~--faa~a~~sG~ 131 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPDL--FAAVAVVSGV 131 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCcc--ceEEEeeccc
Confidence 44999999999999999999999998 7776666554
No 121
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.69 E-value=3.4e-08 Score=83.87 Aligned_cols=103 Identities=15% Similarity=0.096 Sum_probs=65.1
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
.++.|+++|--+|+ ... ++.+...+.. .+.++++.+||.|.--..........+++.+...+.. -+...++.++
T Consensus 6 ~~~~L~cfP~AGGs-a~~-fr~W~~~lp~-~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~---~~~d~P~alf 79 (244)
T COG3208 6 ARLRLFCFPHAGGS-ASL-FRSWSRRLPA-DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLP---PLLDAPFALF 79 (244)
T ss_pred CCceEEEecCCCCC-HHH-HHHHHhhCCc-hhheeeecCCCcccccCCcccccHHHHHHHHHHHhcc---ccCCCCeeec
Confidence 56678888766454 433 4777765543 5999999999998764433332233333333333331 2345599999
Q ss_pred EEcHHHHHHHHHHhhcCCC-CCcceEEEEc
Q 020156 192 GWSLGANILIRYLGHESHS-CPLSGAVSLC 220 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~~~~-~~i~~~v~~~ 220 (330)
||||||++|...|.+.... .+..+..+.+
T Consensus 80 GHSmGa~lAfEvArrl~~~g~~p~~lfisg 109 (244)
T COG3208 80 GHSMGAMLAFEVARRLERAGLPPRALFISG 109 (244)
T ss_pred ccchhHHHHHHHHHHHHHcCCCcceEEEec
Confidence 9999999999999766543 2244444444
No 122
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.68 E-value=2e-07 Score=88.33 Aligned_cols=130 Identities=16% Similarity=0.149 Sum_probs=93.4
Q ss_pred EEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCc-------hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q 020156 89 IRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSE-------DSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP 161 (330)
Q Consensus 89 ~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~-------~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~ 161 (330)
+..+.|.++....+.|.+.+...+.|+++.+-|.++-.- ..|++ ...|++.||-|+.+|.||.........
T Consensus 618 fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR--~~~LaslGy~Vv~IDnRGS~hRGlkFE 695 (867)
T KOG2281|consen 618 FQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR--FCRLASLGYVVVFIDNRGSAHRGLKFE 695 (867)
T ss_pred eecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhh--hhhhhhcceEEEEEcCCCccccchhhH
Confidence 466677777777888876666778999999999875211 11222 245788999999999999876554321
Q ss_pred C----ccCcChHHHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 162 Q----FYSASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 162 ~----~~~~~~~~D~~~~i~~l~~~~~---~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
. -...-.++|-.+-+++|.++++ -.+|.+-|||+||+++++.+.++|+- ++++|+-++.
T Consensus 696 ~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~I--frvAIAGapV 761 (867)
T KOG2281|consen 696 SHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNI--FRVAIAGAPV 761 (867)
T ss_pred HHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcce--eeEEeccCcc
Confidence 1 1112335788888889888864 34899999999999999999999996 6555554443
No 123
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.68 E-value=6.6e-08 Score=80.65 Aligned_cols=107 Identities=19% Similarity=0.229 Sum_probs=76.6
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC-CCCCCCCCC--------CCccCcChHHHHHHHHHHHHHh
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR-GCGDSPVTT--------PQFYSASFLGDMQEVVAHVGSK 182 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r-G~G~S~~~~--------~~~~~~~~~~D~~~~i~~l~~~ 182 (330)
++..||++--+-|.+. ...+..++.+..+||.|+++|+- |---|+... .+........|+..++++|+.+
T Consensus 38 ~~~~li~i~DvfG~~~-~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~ 116 (242)
T KOG3043|consen 38 SKKVLIVIQDVFGFQF-PNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH 116 (242)
T ss_pred CCeEEEEEEeeecccc-HHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc
Confidence 3346666665555444 44588889999999999999984 411222110 1122234457999999999988
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 183 YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 183 ~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
+...+|.++|+++||-++..+...+++ +.++|+.-+.
T Consensus 117 g~~kkIGv~GfCwGak~vv~~~~~~~~---f~a~v~~hps 153 (242)
T KOG3043|consen 117 GDSKKIGVVGFCWGAKVVVTLSAKDPE---FDAGVSFHPS 153 (242)
T ss_pred CCcceeeEEEEeecceEEEEeeccchh---heeeeEecCC
Confidence 777899999999999999998888884 7788776543
No 124
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.67 E-value=3.8e-08 Score=81.06 Aligned_cols=90 Identities=16% Similarity=0.260 Sum_probs=58.4
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcH
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSL 195 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~Sl 195 (330)
|+++||+.|+..+.|...+...+... ++|-..|+ ..| ....|.+-+.+.|..+ ..++++||||+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~--------~~P--~~~~W~~~l~~~i~~~-----~~~~ilVaHSL 64 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW--------DNP--DLDEWVQALDQAIDAI-----DEPTILVAHSL 64 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC----------TS----HHHHHHHHHHCCHC------TTTEEEEEETH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc--------CCC--CHHHHHHHHHHHHhhc-----CCCeEEEEeCH
Confidence 68999999988888777777777665 77777666 111 1234444444444432 23799999999
Q ss_pred HHHHHHHHH-hhcCCCCCcceEEEEcCCC
Q 020156 196 GANILIRYL-GHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 196 Gg~ia~~~a-~~~~~~~~i~~~v~~~~p~ 223 (330)
|+..++.++ .+...+ |.++++|+++-
T Consensus 65 Gc~~~l~~l~~~~~~~--v~g~lLVAp~~ 91 (171)
T PF06821_consen 65 GCLTALRWLAEQSQKK--VAGALLVAPFD 91 (171)
T ss_dssp HHHHHHHHHHHTCCSS--EEEEEEES--S
T ss_pred HHHHHHHHHhhccccc--ccEEEEEcCCC
Confidence 999999999 555555 98888888763
No 125
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.67 E-value=7.5e-08 Score=84.12 Aligned_cols=113 Identities=22% Similarity=0.327 Sum_probs=74.9
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHH-hCCcE----EEEEcCCCC----CCCCC--CCC---------C-ccCcChHH
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRAR-SKGWR----VVVFNSRGC----GDSPV--TTP---------Q-FYSASFLG 170 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~-~~g~~----v~~~d~rG~----G~S~~--~~~---------~-~~~~~~~~ 170 (330)
..-+.||+||+.|+..+ ...++..+. ++|.. ++-++.-|. |.-+. ..| . ......+.
T Consensus 10 ~~tPTifihG~~gt~~s--~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANS--FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp S-EEEEEE--TTGGCCC--CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCCcEEEECCCCCChhH--HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 44568999999887765 588888887 77642 344444443 21111 111 0 11223567
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCC---CcceEEEEcCCCChH
Q 020156 171 DMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSC---PLSGAVSLCNPFNLV 226 (330)
Q Consensus 171 D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~---~i~~~v~~~~p~d~~ 226 (330)
.+..++.+|.++|.-.++-+|||||||.+++.|+..+.... .+...|.+++|++-.
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 89999999999999889999999999999999998876532 479999999999754
No 126
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.66 E-value=3.6e-07 Score=79.56 Aligned_cols=125 Identities=17% Similarity=0.248 Sum_probs=90.4
Q ss_pred CCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHH---HHHHHhCCcEEEEEcC-------CCCCCCCCCCCC
Q 020156 93 DDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHM---LLRARSKGWRVVVFNS-------RGCGDSPVTTPQ 162 (330)
Q Consensus 93 dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~---~~~~~~~g~~v~~~d~-------rG~G~S~~~~~~ 162 (330)
+|....+.++.|.. .+++.|.||++||-.++.. .+ .+. -+-+.++||-|+.+|- -||+.+..+...
T Consensus 43 ~g~~r~y~l~vP~g--~~~~apLvv~LHG~~~sga-g~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~ 118 (312)
T COG3509 43 NGLKRSYRLYVPPG--LPSGAPLVVVLHGSGGSGA-GQ-LHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADR 118 (312)
T ss_pred CCCccceEEEcCCC--CCCCCCEEEEEecCCCChH-Hh-hcccchhhhhcccCcEEECcCccccccCCCcccccCCcccc
Confidence 35555666666553 4556799999999876544 33 322 2334567999999842 355555444444
Q ss_pred ccCcChHHHHHHHHHHHHHhCCCC--cEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 163 FYSASFLGDMQEVVAHVGSKYPKA--HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 163 ~~~~~~~~D~~~~i~~l~~~~~~~--~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
....+.+.++++++..+..+|+-. +|++.|.|-||.++..++.++|+. +.++..++...
T Consensus 119 ~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~--faa~A~VAg~~ 179 (312)
T COG3509 119 RRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDI--FAAIAPVAGLL 179 (312)
T ss_pred cCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCccc--ccceeeeeccc
Confidence 445677889999999999998644 999999999999999999999997 77777776654
No 127
>COG0400 Predicted esterase [General function prediction only]
Probab=98.57 E-value=6.6e-07 Score=75.69 Aligned_cols=106 Identities=22% Similarity=0.296 Sum_probs=62.7
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--------CCccCcCh---HHHHHHHHHHH
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT--------PQFYSASF---LGDMQEVVAHV 179 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~--------~~~~~~~~---~~D~~~~i~~l 179 (330)
+..|+||++||++|+-. .++ .+..... -.+.++.+ ||-=.-.... ..+...+. +..+.++++.+
T Consensus 16 p~~~~iilLHG~Ggde~-~~~-~~~~~~~-P~~~~is~--rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 16 PAAPLLILLHGLGGDEL-DLV-PLPELIL-PNATLVSP--RGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCcEEEEEecCCCChh-hhh-hhhhhcC-CCCeEEcC--CCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 36789999999976444 332 3333332 23444433 3321110000 01111112 23444555555
Q ss_pred HHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 180 GSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 180 ~~~~~--~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
.++++ ..+++++|+|-||++++.....++.. ++++|+.++..
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~--~~~ail~~g~~ 134 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLPGL--FAGAILFSGML 134 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCchh--hccchhcCCcC
Confidence 55554 46999999999999999999999987 88888777643
No 128
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.54 E-value=2.4e-06 Score=76.84 Aligned_cols=104 Identities=13% Similarity=0.144 Sum_probs=76.5
Q ss_pred CCCcEEEEeCCCCCCCchHHHH--HH-HHHHHhCCcEEEEEcCCCCCCCCCCCCCcc----C-------cChHHHHHHHH
Q 020156 111 PDSPVLILMPGLTGGSEDSYVR--HM-LLRARSKGWRVVVFNSRGCGDSPVTTPQFY----S-------ASFLGDMQEVV 176 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~--~~-~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~----~-------~~~~~D~~~~i 176 (330)
..+|++|.++|.+.. .|++ .+ +..|+++|+..+++..|-||.-........ . ...+.+.+.++
T Consensus 90 ~~rp~~IhLagTGDh---~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll 166 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDH---GFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALL 166 (348)
T ss_pred CCCceEEEecCCCcc---chhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHH
Confidence 368999999997432 2333 33 778899999999999999987543222111 1 22356888899
Q ss_pred HHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEc
Q 020156 177 AHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLC 220 (330)
Q Consensus 177 ~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~ 220 (330)
+|+..+ +..++.+.|.||||.+|...++..|.. +..+-.++
T Consensus 167 ~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~p--v~~vp~ls 207 (348)
T PF09752_consen 167 HWLERE-GYGPLGLTGISMGGHMAALAASNWPRP--VALVPCLS 207 (348)
T ss_pred HHHHhc-CCCceEEEEechhHhhHHhhhhcCCCc--eeEEEeec
Confidence 999988 666999999999999999999999986 54444444
No 129
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.46 E-value=5.2e-06 Score=75.29 Aligned_cols=130 Identities=15% Similarity=0.118 Sum_probs=87.2
Q ss_pred EEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCC---CCCchHHHHHHHHHH-HhCCcEEEEEcCCCCCCCCCCCCCcc
Q 020156 89 IRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLT---GGSEDSYVRHMLLRA-RSKGWRVVVFNSRGCGDSPVTTPQFY 164 (330)
Q Consensus 89 ~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~---g~~~~~~~~~~~~~~-~~~g~~v~~~d~rG~G~S~~~~~~~~ 164 (330)
+.......+....+.|.........|.||++||.+ |+........+...+ .+.+..|+.+|||= .|+..
T Consensus 66 v~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL-------APEh~ 138 (336)
T KOG1515|consen 66 VTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL-------APEHP 138 (336)
T ss_pred eEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc-------CCCCC
Confidence 33444455666666665422225789999999986 322223335555554 56689999999992 33333
Q ss_pred CcChHHHHHHHHHHHHHh------CCCCcEEEEEEcHHHHHHHHHHhhcC----CCCCcceEEEEcCCCCh
Q 020156 165 SASFLGDMQEVVAHVGSK------YPKAHLYAVGWSLGANILIRYLGHES----HSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 165 ~~~~~~D~~~~i~~l~~~------~~~~~i~lvG~SlGg~ia~~~a~~~~----~~~~i~~~v~~~~p~d~ 225 (330)
.....+|...+++|+.+. -...+++++|-|.||+||...+.+.- ..-.|++.|++-|-+..
T Consensus 139 ~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 139 FPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred CCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 445668888888888764 13348999999999999998875443 22358999999887754
No 130
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.45 E-value=1.3e-06 Score=74.81 Aligned_cols=103 Identities=17% Similarity=0.147 Sum_probs=78.5
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhC----C---
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY----P--- 184 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~----~--- 184 (330)
..|+|+++||+.- ...|...+...+.++||-|+++++-..-. ....+.+++...+++|+.... |
T Consensus 45 ~yPVilF~HG~~l--~ns~Ys~lL~HIASHGfIVVAPQl~~~~~-------p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V 115 (307)
T PF07224_consen 45 TYPVILFLHGFNL--YNSFYSQLLAHIASHGFIVVAPQLYTLFP-------PDGQDEIKSAASVINWLPEGLQHVLPENV 115 (307)
T ss_pred CccEEEEeechhh--hhHHHHHHHHHHhhcCeEEEechhhcccC-------CCchHHHHHHHHHHHHHHhhhhhhCCCCc
Confidence 6899999999954 33455888899999999999999864211 223466789999999997652 1
Q ss_pred ---CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 185 ---KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 185 ---~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
-.++.++|||.||-.|..+|..+...-.+.++|.+.+.-
T Consensus 116 ~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 116 EANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred ccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 238999999999999999998776444577777776653
No 131
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.45 E-value=7.8e-07 Score=78.02 Aligned_cols=129 Identities=12% Similarity=0.100 Sum_probs=74.9
Q ss_pred CEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCC----cEEEEEcCCCCCCCCC--CC-----CCc
Q 020156 95 GSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKG----WRVVVFNSRGCGDSPV--TT-----PQF 163 (330)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g----~~v~~~d~rG~G~S~~--~~-----~~~ 163 (330)
....+..+.|.+-....+-|+|+++||..+.....-.......+.++| .-+++++.-+.+.... .. ...
T Consensus 6 ~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~ 85 (251)
T PF00756_consen 6 RDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRA 85 (251)
T ss_dssp EEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBC
T ss_pred CeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccccccc
Confidence 344444443332223347799999999722111111222333344443 4456677655541110 00 001
Q ss_pred c----CcChHHHH-HHHHHHHHHhCCCC--cEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 164 Y----SASFLGDM-QEVVAHVGSKYPKA--HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 164 ~----~~~~~~D~-~~~i~~l~~~~~~~--~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
. ...+.+.+ .+++.++..+++.. +..++|+||||..++.++.++|+. +.+++++++.++.
T Consensus 86 ~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~--F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 86 DDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDL--FGAVIAFSGALDP 152 (251)
T ss_dssp TSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTT--ESEEEEESEESET
T ss_pred ccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccc--cccccccCccccc
Confidence 1 11223333 36777888887532 279999999999999999999998 9999999976554
No 132
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.40 E-value=8.9e-07 Score=82.22 Aligned_cols=108 Identities=19% Similarity=0.283 Sum_probs=61.6
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC-CCCC-C-CCC---------------------CccCc
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC-GDSP-V-TTP---------------------QFYSA 166 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~-G~S~-~-~~~---------------------~~~~~ 166 (330)
.+.|+||+-||++|+.. .| -.++..|+++||-|+++|+|-. +-.. . ... .....
T Consensus 98 ~~~PvvIFSHGlgg~R~-~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-SY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT--TT-TT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCcchh-hH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 36899999999977544 45 7788999999999999999943 2110 0 000 00000
Q ss_pred -----------ChHHHHHHHHHHHHHh------------------C----CCCcEEEEEEcHHHHHHHHHHhhcCCCCCc
Q 020156 167 -----------SFLGDMQEVVAHVGSK------------------Y----PKAHLYAVGWSLGANILIRYLGHESHSCPL 213 (330)
Q Consensus 167 -----------~~~~D~~~~i~~l~~~------------------~----~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i 213 (330)
.-++|+..+++.+.+- + .-.+|.++|||+||..++..+.+.. + +
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~-r--~ 252 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT-R--F 252 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T-T---
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc-C--c
Confidence 0134677777776531 0 0126999999999999999888774 3 8
Q ss_pred ceEEEEcCCC
Q 020156 214 SGAVSLCNPF 223 (330)
Q Consensus 214 ~~~v~~~~p~ 223 (330)
+++|++.+-.
T Consensus 253 ~~~I~LD~W~ 262 (379)
T PF03403_consen 253 KAGILLDPWM 262 (379)
T ss_dssp -EEEEES---
T ss_pred ceEEEeCCcc
Confidence 9999988754
No 133
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.40 E-value=1e-06 Score=72.58 Aligned_cols=126 Identities=17% Similarity=0.233 Sum_probs=84.5
Q ss_pred EEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCC---CCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc
Q 020156 87 ECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLT---GGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQF 163 (330)
Q Consensus 87 ~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~---g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~ 163 (330)
+.+..-.|+.-.+|...++. ..|..|++||.- |+... .-..+..+.++||+|.+++|- .++. .-
T Consensus 46 e~l~Yg~~g~q~VDIwg~~~-----~~klfIfIHGGYW~~g~rk~--clsiv~~a~~~gY~vasvgY~---l~~q---~h 112 (270)
T KOG4627|consen 46 EHLRYGEGGRQLVDIWGSTN-----QAKLFIFIHGGYWQEGDRKM--CLSIVGPAVRRGYRVASVGYN---LCPQ---VH 112 (270)
T ss_pred hccccCCCCceEEEEecCCC-----CccEEEEEecchhhcCchhc--ccchhhhhhhcCeEEEEeccC---cCcc---cc
Confidence 33444445455556444343 678999999853 11111 224566788999999999773 3321 12
Q ss_pred cCcChHHHHHHHHHHHHHhCCCC-cEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChH
Q 020156 164 YSASFLGDMQEVVAHVGSKYPKA-HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 164 ~~~~~~~D~~~~i~~l~~~~~~~-~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~ 226 (330)
+......|+...++++.+.+++. .+.+-|||.|+.+++.+..+..+. .|.++++.|+.+++.
T Consensus 113 tL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~p-rI~gl~l~~GvY~l~ 175 (270)
T KOG4627|consen 113 TLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSP-RIWGLILLCGVYDLR 175 (270)
T ss_pred cHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCc-hHHHHHHHhhHhhHH
Confidence 33456788899999999988876 577889999999999988765432 388888888776643
No 134
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.38 E-value=2.4e-06 Score=72.62 Aligned_cols=109 Identities=20% Similarity=0.223 Sum_probs=82.9
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCC-----cEEEEEcCCCCCCCCC------CCC---------CccCcChHHHHH
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKG-----WRVVVFNSRGCGDSPV------TTP---------QFYSASFLGDMQ 173 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g-----~~v~~~d~rG~G~S~~------~~~---------~~~~~~~~~D~~ 173 (330)
-+.|++||..|...+ +..++..+...+ --++.+|.-|.=...+ ..| +.+...+..-+.
T Consensus 46 iPTIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 46 IPTIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred cceEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 347999999887665 688888887765 2356677766311111 111 122346678899
Q ss_pred HHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC---CCcceEEEEcCCCC
Q 020156 174 EVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS---CPLSGAVSLCNPFN 224 (330)
Q Consensus 174 ~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~---~~i~~~v~~~~p~d 224 (330)
.++.+|.++|.-.++.++||||||.-+..|+..++.. .++...|.++.|++
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 9999999999888999999999999999999998765 36999999999997
No 135
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.36 E-value=4e-06 Score=72.69 Aligned_cols=113 Identities=14% Similarity=0.157 Sum_probs=73.3
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCc--EEEEEcCCCCCCCCC-CCCCccCcChHHHHHHHHHHHHHhCCCCcE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGW--RVVVFNSRGCGDSPV-TTPQFYSASFLGDMQEVVAHVGSKYPKAHL 188 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~--~v~~~d~rG~G~S~~-~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i 188 (330)
++.++|++||+..+..+ -+...++-....++ .++.|.||..|.-.. ...+.....-..++..+++.+....+..+|
T Consensus 17 ~~~vlvfVHGyn~~f~~-a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFED-ALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHH-HHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 67899999999665443 23444433333344 799999998875211 111111122345777888888777677799
Q ss_pred EEEEEcHHHHHHHHHHhhcCCC-------CCcceEEEEcCCCCh
Q 020156 189 YAVGWSLGANILIRYLGHESHS-------CPLSGAVSLCNPFNL 225 (330)
Q Consensus 189 ~lvG~SlGg~ia~~~a~~~~~~-------~~i~~~v~~~~p~d~ 225 (330)
.+++||||+.+.+..+...... ..+..++++++-.+.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 9999999999999887543221 136677777766554
No 136
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.33 E-value=4.1e-05 Score=71.75 Aligned_cols=105 Identities=17% Similarity=0.183 Sum_probs=74.5
Q ss_pred CCcEEEEeC------CCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCC
Q 020156 112 DSPVLILMP------GLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPK 185 (330)
Q Consensus 112 ~~p~vv~~H------G~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 185 (330)
++|.||+=+ |++|-..+ .-+-.+++.|.-|+.+.+. +.+.+..+..+...-..++++.+...+|.
T Consensus 68 krP~vViDPRAGHGpGIGGFK~d----SevG~AL~~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~ 138 (581)
T PF11339_consen 68 KRPFVVIDPRAGHGPGIGGFKPD----SEVGVALRAGHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERHPD 138 (581)
T ss_pred CCCeEEeCCCCCCCCCccCCCcc----cHHHHHHHcCCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhCCC
Confidence 556555543 44444332 2334456779999888764 22334444445555566778888888886
Q ss_pred C-cEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHh
Q 020156 186 A-HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 186 ~-~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~ 227 (330)
. +..++|-+.||..++.+|+..|+. +..+|+-++|.+...
T Consensus 139 ~~kp~liGnCQgGWa~~mlAA~~Pd~--~gplvlaGaPlsywa 179 (581)
T PF11339_consen 139 APKPNLIGNCQGGWAAMMLAALRPDL--VGPLVLAGAPLSYWA 179 (581)
T ss_pred CCCceEEeccHHHHHHHHHHhcCcCc--cCceeecCCCccccc
Confidence 6 999999999999999999999998 888888888887655
No 137
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.31 E-value=1.4e-05 Score=69.51 Aligned_cols=126 Identities=14% Similarity=0.226 Sum_probs=76.5
Q ss_pred CCCCEEEEEeecCCCCCCCCCC-cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCC---CCCCCCCCc----
Q 020156 92 KDDGSVALDWISGDHQLLPPDS-PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG---DSPVTTPQF---- 163 (330)
Q Consensus 92 ~dg~~~~~~~~~~~~~~~~~~~-p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G---~S~~~~~~~---- 163 (330)
+.|.++.+.++.|++-.+..+. |.||++||.+..+.+.+ ..+ ..|.-.++.+.+-.+ .++.-.+-+
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~-~~l-----~sg~gaiawa~pedqcfVlAPQy~~if~d~e 242 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDND-KVL-----SSGIGAIAWAGPEDQCFVLAPQYNPIFADSE 242 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhh-hhh-----hcCccceeeecccCceEEEcccccccccccc
Confidence 4577888888877654444555 99999999875555433 111 223333333333222 011100000
Q ss_pred -cCcChHHHHHHHHH-HHHHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 164 -YSASFLGDMQEVVA-HVGSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 164 -~~~~~~~D~~~~i~-~l~~~~~--~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
...........+++ -+..+|. .++|+++|.|+||+-++.++.++|+. +.+++.+|+..|-
T Consensus 243 ~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf--FAaa~~iaG~~d~ 306 (387)
T COG4099 243 EKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF--FAAAVPIAGGGDR 306 (387)
T ss_pred cccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh--hheeeeecCCCch
Confidence 01122223333333 4444443 45999999999999999999999999 9999999998873
No 138
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.31 E-value=4.6e-06 Score=72.78 Aligned_cols=103 Identities=17% Similarity=0.141 Sum_probs=73.8
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEE
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 193 (330)
|+|+++||..|... . +..+...+... ..|+.++.||.+.-.. . ...+-+-+...++.+++..|..++.++||
T Consensus 1 ~pLF~fhp~~G~~~-~-~~~L~~~l~~~-~~v~~l~a~g~~~~~~--~---~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~ 72 (257)
T COG3319 1 PPLFCFHPAGGSVL-A-YAPLAAALGPL-LPVYGLQAPGYGAGEQ--P---FASLDDMAAAYVAAIRRVQPEGPYVLLGW 72 (257)
T ss_pred CCEEEEcCCCCcHH-H-HHHHHHHhccC-ceeeccccCccccccc--c---cCCHHHHHHHHHHHHHHhCCCCCEEEEee
Confidence 57999999877544 3 36666666544 9999999999975211 1 12333445566777887778889999999
Q ss_pred cHHHHHHHHHHhhcCCC-CCcceEEEEcCCCC
Q 020156 194 SLGANILIRYLGHESHS-CPLSGAVSLCNPFN 224 (330)
Q Consensus 194 SlGg~ia~~~a~~~~~~-~~i~~~v~~~~p~d 224 (330)
|+||++|...|.+--.. ..|.-++++.++..
T Consensus 73 S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 73 SLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999998654322 13888888888765
No 139
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.26 E-value=2.5e-05 Score=74.61 Aligned_cols=119 Identities=17% Similarity=0.089 Sum_probs=77.9
Q ss_pred ceEEEEcCC---CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHH-----------HHHH------hCCcE
Q 020156 85 KRECIRTKD---DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHML-----------LRAR------SKGWR 144 (330)
Q Consensus 85 ~~~~~~~~d---g~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~-----------~~~~------~~g~~ 144 (330)
....++..+ +..+.++++... ..+.+.|+||+++|.+|++.. .-.+. ..+. .+-.+
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~--~~~~~~Pl~lwlnGGPG~ss~--~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~ 123 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPR--NGNPEAPVLLWMTGGPGCSSM--FALLAENGPCLMNETTGDIYNNTYSWNNEAY 123 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcC--CCCCCCCEEEEECCCCcHHHH--HhhhccCCCeEEeCCCCceeECCcccccccC
Confidence 344555543 445555555443 235678999999999998753 11111 0011 11257
Q ss_pred EEEEcC-CCCCCCCCCCCC--ccCcChHHHHHHHHHHHHHhCCC---CcEEEEEEcHHHHHHHHHHhhc
Q 020156 145 VVVFNS-RGCGDSPVTTPQ--FYSASFLGDMQEVVAHVGSKYPK---AHLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 145 v~~~d~-rG~G~S~~~~~~--~~~~~~~~D~~~~i~~l~~~~~~---~~i~lvG~SlGg~ia~~~a~~~ 207 (330)
++.+|. +|+|.|...... ......++|+.++++....++|. .+++++|+|+||..+..+|.+.
T Consensus 124 ~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i 192 (462)
T PTZ00472 124 VIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRI 192 (462)
T ss_pred eEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHH
Confidence 888996 599988654332 22345778999999877776664 7999999999999998887653
No 140
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.26 E-value=6.2e-06 Score=79.05 Aligned_cols=138 Identities=17% Similarity=0.207 Sum_probs=99.4
Q ss_pred ceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---
Q 020156 85 KRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP--- 161 (330)
Q Consensus 85 ~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~--- 161 (330)
+|..++..||..+.+..+-..+.....+.|++|..-|--|.+.+..+....-.|+.+|+--.+..-||-|.-...+-
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~G 499 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDG 499 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhh
Confidence 45556668998887775443322345578999999988777766555555567889999988899999887654321
Q ss_pred C-ccCcChHHHHHHHHHHHHHh-CC-CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 162 Q-FYSASFLGDMQEVVAHVGSK-YP-KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 162 ~-~~~~~~~~D~~~~i~~l~~~-~~-~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
+ +.-..-.+|..++.++|.+. +. ...++++|-|.||+++...+.+.|+. +.++|+-.|-.|
T Consensus 500 K~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~l--f~~iiA~VPFVD 563 (682)
T COG1770 500 KLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDL--FAGIIAQVPFVD 563 (682)
T ss_pred hhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhh--hhheeecCCccc
Confidence 1 11123357999999999876 33 33899999999999999999999997 766666555445
No 141
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.24 E-value=8.3e-06 Score=73.03 Aligned_cols=116 Identities=13% Similarity=0.163 Sum_probs=81.2
Q ss_pred CCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhC---C------cEEEEEcCCCCCCCCCCCCCc
Q 020156 93 DDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSK---G------WRVVVFNSRGCGDSPVTTPQF 163 (330)
Q Consensus 93 dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~---g------~~v~~~d~rG~G~S~~~~~~~ 163 (330)
.|-.+..-.+.+.+....+.-.+|+++||++|+-.+ +..++.-|... | |.|+++-.+|+|-|+.++...
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~E--FykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G 209 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVRE--FYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG 209 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHH--HHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC
Confidence 355554444433321222334569999999998776 34566556443 3 899999999999999887665
Q ss_pred cCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcce
Q 020156 164 YSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSG 215 (330)
Q Consensus 164 ~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~ 215 (330)
.+. ..+..++..|..+.+-.+..+=|--+|+.|+.++|..+|++ |.+
T Consensus 210 Fn~---~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPen--V~G 256 (469)
T KOG2565|consen 210 FNA---AATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPEN--VLG 256 (469)
T ss_pred ccH---HHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchh--hhH
Confidence 443 33344556555555666999999999999999999999998 655
No 142
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.22 E-value=1.3e-05 Score=76.33 Aligned_cols=129 Identities=22% Similarity=0.322 Sum_probs=77.4
Q ss_pred CCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHH-HH-HHHHHhCCcEEEEEcCCCCCCCCCCC-------CCc
Q 020156 93 DDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVR-HM-LLRARSKGWRVVVFNSRGCGDSPVTT-------PQF 163 (330)
Q Consensus 93 dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~-~~-~~~~~~~g~~v~~~d~rG~G~S~~~~-------~~~ 163 (330)
+.++....+...+.- -.+++|++|++-| .+.....++. .+ ...+.+.|-.++++.+|-+|.|.... .-+
T Consensus 10 ~~~tf~qRY~~n~~~-~~~~gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yL 87 (434)
T PF05577_consen 10 NNGTFSQRYWVNDQY-YKPGGPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYL 87 (434)
T ss_dssp TT-EEEEEEEEE-TT---TTSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-
T ss_pred CCCeEEEEEEEEhhh-cCCCCCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhc
Confidence 345555554332210 1124676666644 3433322222 12 33334558899999999999995321 123
Q ss_pred cCcChHHHHHHHHHHHHHhC---CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 164 YSASFLGDMQEVVAHVGSKY---PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 164 ~~~~~~~D~~~~i~~l~~~~---~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
+.+....|+..++++++.++ ++.|++++|-|+||+++..+-.++|+. |.++++-++|...
T Consensus 88 t~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~--~~ga~ASSapv~a 150 (434)
T PF05577_consen 88 TSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHL--FDGAWASSAPVQA 150 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT---SEEEEET--CCH
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCe--eEEEEeccceeee
Confidence 44566789999999999775 355999999999999999999999998 9999999999753
No 143
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.22 E-value=5.1e-06 Score=67.05 Aligned_cols=92 Identities=13% Similarity=0.217 Sum_probs=60.7
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEE
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 193 (330)
+.+|++||+.+++...|...+...+.. +-.++.. .+.....++|++-+...++.+ .+ ++++|+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~-------~w~~P~~~dWi~~l~~~v~a~-~~----~~vlVAH 66 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQD-------DWEAPVLDDWIARLEKEVNAA-EG----PVVLVAH 66 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccC-------CCCCCCHHHHHHHHHHHHhcc-CC----CeEEEEe
Confidence 468999999988776665444333321 2122221 112223345655555555554 22 7999999
Q ss_pred cHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 194 SLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 194 SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
|+|+..++.++.+.... |.+++++++|.
T Consensus 67 SLGc~~v~h~~~~~~~~--V~GalLVAppd 94 (181)
T COG3545 67 SLGCATVAHWAEHIQRQ--VAGALLVAPPD 94 (181)
T ss_pred cccHHHHHHHHHhhhhc--cceEEEecCCC
Confidence 99999999999888776 99999888774
No 144
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.21 E-value=4.7e-06 Score=71.58 Aligned_cols=109 Identities=17% Similarity=0.162 Sum_probs=54.2
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHh--CCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHH-HHHHHHHhCC-CCc
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARS--KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQE-VVAHVGSKYP-KAH 187 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~--~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~-~i~~l~~~~~-~~~ 187 (330)
+...||++||+.|+..+ +..+...+.. ..+.-..+...++......+ ........+.+.+ +.+.+...-. ..+
T Consensus 3 ~~hLvV~vHGL~G~~~d--~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T-~~gI~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPAD--MRYLKNHLEKIPEDLPNARIVVLGYSNNEFKT-FDGIDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCHHH--HHHHHHHHHHhhhhcchhhhhhhccccccccc-chhhHHHHHHHHHHHHHhcccccccccc
Confidence 45689999999998665 3445444443 22222122222221111111 1111223333332 2223222212 248
Q ss_pred EEEEEEcHHHHHHHHHHhhcCCCC----------CcceEEEEcCCC
Q 020156 188 LYAVGWSLGANILIRYLGHESHSC----------PLSGAVSLCNPF 223 (330)
Q Consensus 188 i~lvG~SlGg~ia~~~a~~~~~~~----------~i~~~v~~~~p~ 223 (330)
|.+|||||||.++-.++....+.. .....+.+++|.
T Consensus 80 IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH 125 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPH 125 (217)
T ss_pred ceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCC
Confidence 999999999999976665332210 133456677775
No 145
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.20 E-value=2.8e-05 Score=73.09 Aligned_cols=124 Identities=18% Similarity=0.148 Sum_probs=76.6
Q ss_pred CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCc----EEEEEcCCCCCCCCCCCCCccCcChH
Q 020156 94 DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGW----RVVVFNSRGCGDSPVTTPQFYSASFL 169 (330)
Q Consensus 94 g~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~----~v~~~d~rG~G~S~~~~~~~~~~~~~ 169 (330)
|....+..+.|.+.. +...|+|+++||-.-. ....+...++.+.++|. .++.+|..+.. .....-.....+.
T Consensus 191 g~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~-~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~R~~el~~~~~f~ 266 (411)
T PRK10439 191 GNSRRVWIYTTGDAA-PEERPLAILLDGQFWA-ESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--HRSQELPCNADFW 266 (411)
T ss_pred CCceEEEEEECCCCC-CCCCCEEEEEECHHhh-hcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--cccccCCchHHHH
Confidence 445555555554322 3467999999995321 11113455666777773 35667753211 1110011123344
Q ss_pred HHH-HHHHHHHHHhCC----CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 170 GDM-QEVVAHVGSKYP----KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 170 ~D~-~~~i~~l~~~~~----~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
+.+ .+++-++.++|+ ..+.+++|+||||..++.++.++|+. +.+++++++.+
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~--Fg~v~s~Sgs~ 323 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPER--FGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCccc--ccEEEEeccce
Confidence 444 355667777654 23789999999999999999999998 99999998875
No 146
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.20 E-value=4.4e-06 Score=68.85 Aligned_cols=101 Identities=16% Similarity=0.214 Sum_probs=79.4
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEc
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWS 194 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S 194 (330)
.+|++-|=+|.. ..-+.++..|.++|+.|+.+|.+-+=-+.. +.++.+.|+..+|++...+++..+++++|+|
T Consensus 4 ~~v~~SGDgGw~--~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-----tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWR--DLDKQIAEALAKQGVPVVGVDSLRYFWSER-----TPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCch--hhhHHHHHHHHHCCCeEEEechHHHHhhhC-----CHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 567777765543 445788999999999999999875543322 2246689999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCC--CCcceEEEEcCC
Q 020156 195 LGANILIRYLGHESHS--CPLSGAVSLCNP 222 (330)
Q Consensus 195 lGg~ia~~~a~~~~~~--~~i~~~v~~~~p 222 (330)
+|+-++.....+.|.. ..|..++++++.
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 9999998888888753 347778877765
No 147
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.19 E-value=5.6e-06 Score=70.83 Aligned_cols=108 Identities=14% Similarity=0.163 Sum_probs=48.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHH----HHHHHhCCcEEEEEcCCCCC-----CCCC----------CCCCcc--------
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHM----LLRARSKGWRVVVFNSRGCG-----DSPV----------TTPQFY-------- 164 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~----~~~~~~~g~~v~~~d~rG~G-----~S~~----------~~~~~~-------- 164 (330)
.++-||++||+.. +.+.+ +.. ...+.+.++..+.+|-+--- -.+. ..+.+.
T Consensus 3 ~k~riLcLHG~~~-na~if-~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYGQ-NAEIF-RQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT---HHHH-HHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCCc-CHHHH-HHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 4678999999954 44333 332 22333338999999876322 1100 001000
Q ss_pred --CcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcC------CCCCcceEEEEcCCC
Q 020156 165 --SASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES------HSCPLSGAVSLCNPF 223 (330)
Q Consensus 165 --~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~------~~~~i~~~v~~~~p~ 223 (330)
..++.+-+..+.+++.+..| =..++|||.||.+|..++.... ...+++-+|++|+..
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred ccccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 11223334444445555533 3589999999999998886432 113478888887654
No 148
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.17 E-value=7.5e-06 Score=73.93 Aligned_cols=96 Identities=16% Similarity=0.174 Sum_probs=70.9
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC--CCCCCCCC---Ccc---CcChHHHHHHHHHHHHHh-
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC--GDSPVTTP---QFY---SASFLGDMQEVVAHVGSK- 182 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~--G~S~~~~~---~~~---~~~~~~D~~~~i~~l~~~- 182 (330)
..|+|++-||.++... . +..+.+.+.+.||.|.++|++|. |+.+.... .+. ..+-..|+..++++|.+.
T Consensus 70 ~~PlvvlshG~Gs~~~-~-f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~ 147 (365)
T COG4188 70 LLPLVVLSHGSGSYVT-G-FAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLT 147 (365)
T ss_pred cCCeEEecCCCCCCcc-c-hhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhh
Confidence 6799999999966544 4 47788899999999999999984 33332111 111 123456999999988766
Q ss_pred ----C----CCCcEEEEEEcHHHHHHHHHHhhcCC
Q 020156 183 ----Y----PKAHLYAVGWSLGANILIRYLGHESH 209 (330)
Q Consensus 183 ----~----~~~~i~lvG~SlGg~ia~~~a~~~~~ 209 (330)
. ...+|.++|||+||+.++..++-+.+
T Consensus 148 ~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 148 ASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 1 12389999999999999999887765
No 149
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.17 E-value=9.3e-06 Score=78.55 Aligned_cols=124 Identities=16% Similarity=0.078 Sum_probs=77.1
Q ss_pred CEEEEEeecCCCCCCCCCCcEEEEeCCCC---CCCchHHHHHHHHHHHh-C-CcEEEEEcCC-CC---CCCCCCCCCccC
Q 020156 95 GSVALDWISGDHQLLPPDSPVLILMPGLT---GGSEDSYVRHMLLRARS-K-GWRVVVFNSR-GC---GDSPVTTPQFYS 165 (330)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~p~vv~~HG~~---g~~~~~~~~~~~~~~~~-~-g~~v~~~d~r-G~---G~S~~~~~~~~~ 165 (330)
.-+.++.+.+.......+.|+||++||.+ |+... + ....+.+ . |+.|+.+|+| |. ..+... ....
T Consensus 77 dcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~-~---~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~--~~~~ 150 (493)
T cd00312 77 DCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSL-Y---PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI--ELPG 150 (493)
T ss_pred cCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCC-C---ChHHHHhcCCCEEEEEecccccccccccCCCC--CCCc
Confidence 35666655554322234679999999963 32221 1 1123333 3 3999999999 43 222211 1111
Q ss_pred cChHHHHHHHHHHHHHh---C--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 166 ASFLGDMQEVVAHVGSK---Y--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 166 ~~~~~D~~~~i~~l~~~---~--~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
..-..|...+++|+++. + ...+|.++|+|.||..+..++........+.++|+.+++..
T Consensus 151 n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 151 NYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred chhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 12257999999999875 2 23489999999999999888776333234788888876653
No 150
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.15 E-value=1e-05 Score=87.15 Aligned_cols=100 Identities=12% Similarity=0.072 Sum_probs=71.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
+.++++++||++|+.. . +..++..+ ..+++|+.++.+|++.+. ........+++|+.+.++.+ .+..++.++
T Consensus 1067 ~~~~l~~lh~~~g~~~-~-~~~l~~~l-~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~---~~~~p~~l~ 1138 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAW-Q-FSVLSRYL-DPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQ---QPHGPYHLL 1138 (1296)
T ss_pred CCCCeEEecCCCCchH-H-HHHHHHhc-CCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhh---CCCCCEEEE
Confidence 3467999999987654 2 46666555 567999999999998652 22334455566665555543 244589999
Q ss_pred EEcHHHHHHHHHHhhc---CCCCCcceEEEEcC
Q 020156 192 GWSLGANILIRYLGHE---SHSCPLSGAVSLCN 221 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~---~~~~~i~~~v~~~~ 221 (330)
|||+||.++..+|.+. ++. +..++++++
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~--v~~l~l~~~ 1169 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEE--VAFLGLLDT 1169 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCc--eeEEEEecC
Confidence 9999999999999863 555 777777664
No 151
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.11 E-value=2.4e-05 Score=73.06 Aligned_cols=126 Identities=21% Similarity=0.181 Sum_probs=78.6
Q ss_pred EEEEEeecCCCCCCCCCCcEEEEeCCCC--CCCchHHHHHHHHHHHhCC-cEEEEEcCC----CCCC-CCCCCCCcc-Cc
Q 020156 96 SVALDWISGDHQLLPPDSPVLILMPGLT--GGSEDSYVRHMLLRARSKG-WRVVVFNSR----GCGD-SPVTTPQFY-SA 166 (330)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~p~vv~~HG~~--g~~~~~~~~~~~~~~~~~g-~~v~~~d~r----G~G~-S~~~~~~~~-~~ 166 (330)
-+.+....|+ ....+.|++|+|||.. +++.... ..-...|.++| +-||.+||| |+-. |.....+.. ..
T Consensus 79 CL~LNIwaP~--~~a~~~PVmV~IHGG~y~~Gs~s~~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n 155 (491)
T COG2272 79 CLYLNIWAPE--VPAEKLPVMVYIHGGGYIMGSGSEP-LYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASN 155 (491)
T ss_pred ceeEEeeccC--CCCCCCcEEEEEeccccccCCCccc-ccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccc
Confidence 4555544443 1234679999999875 2222221 11234577777 999999999 3321 222211111 11
Q ss_pred ChHHHHHHHHHHHHHh---CC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 167 SFLGDMQEVVAHVGSK---YP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~---~~--~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
--..|...+++|+++. ++ ..+|.|+|.|.||+.++.+++--...-.+..+|+.+++..
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 2357999999999875 33 3489999999999999988765322234777888887764
No 152
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.06 E-value=4.9e-06 Score=79.26 Aligned_cols=140 Identities=17% Similarity=0.174 Sum_probs=101.0
Q ss_pred cceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc
Q 020156 84 LKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQF 163 (330)
Q Consensus 84 ~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~ 163 (330)
..|..+...||..+.+..+-.........+|.+|..+|.-|-+-+.+++.--..|..+|+-....|.||-|+-...+..-
T Consensus 441 ~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~ 520 (712)
T KOG2237|consen 441 VERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKD 520 (712)
T ss_pred EEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhc
Confidence 35666778899988877655433334457899999998776665544443333456799999999999988776544321
Q ss_pred ----cCcChHHHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 164 ----YSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 164 ----~~~~~~~D~~~~i~~l~~~~--~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
.-....+|..++.++|.+.. ...++.+.|.|.||.++...+..+|+. +.++|+-.+-.|+
T Consensus 521 G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdL--F~avia~VpfmDv 586 (712)
T KOG2237|consen 521 GRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDL--FGAVIAKVPFMDV 586 (712)
T ss_pred cchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchH--hhhhhhcCcceeh
Confidence 11345689999999998763 234899999999999999999999997 7666655555553
No 153
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.01 E-value=2.3e-05 Score=76.41 Aligned_cols=125 Identities=18% Similarity=0.084 Sum_probs=73.8
Q ss_pred CEEEEEeecCCCCCCCCCCcEEEEeCCCC---CCCc-hHHHHHHHHHHHhCCcEEEEEcCC----CCCCCCCCCCCccCc
Q 020156 95 GSVALDWISGDHQLLPPDSPVLILMPGLT---GGSE-DSYVRHMLLRARSKGWRVVVFNSR----GCGDSPVTTPQFYSA 166 (330)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~p~vv~~HG~~---g~~~-~~~~~~~~~~~~~~g~~v~~~d~r----G~G~S~~~~~~~~~~ 166 (330)
.-+.+..+.|.......+.|++|++||.. |++. .. ......+.+++.-||.+||| |+-.++.......+
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~--~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN- 183 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPP--YDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGN- 183 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGG--GHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBST-
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCccccc--ccccccccCCCEEEEEecccccccccccccccccCchh-
Confidence 46777766655422233579999999965 3331 21 22334456789999999999 44333221111112
Q ss_pred ChHHHHHHHHHHHHHh---CC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 167 SFLGDMQEVVAHVGSK---YP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~---~~--~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
-=..|.+.+++|+++. ++ ..+|.++|+|.||..+...+........+.++|+.++.
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 2247999999999875 33 23899999999999888777664334569999999884
No 154
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.98 E-value=1.8e-05 Score=69.34 Aligned_cols=106 Identities=18% Similarity=0.238 Sum_probs=69.3
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCC------CC-CCCc-----c--------------
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP------VT-TPQF-----Y-------------- 164 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~------~~-~~~~-----~-------------- 164 (330)
.+-|++|+-||++| ++..| ..++-.++++||-|.++.+|-...+- .. .+.+ .
T Consensus 116 ~k~PvvvFSHGLgg-sRt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ir 193 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGG-SRTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIR 193 (399)
T ss_pred CCccEEEEeccccc-chhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEee
Confidence 46799999999955 66555 77888999999999999999653320 10 0000 0
Q ss_pred CcC---hHHHHHHHHHHHHHh---------CC--------------CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEE
Q 020156 165 SAS---FLGDMQEVVAHVGSK---------YP--------------KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVS 218 (330)
Q Consensus 165 ~~~---~~~D~~~~i~~l~~~---------~~--------------~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~ 218 (330)
++. -++.+..+++-+..- .+ .+++.++|||+||..+....+.+.+ ++++|+
T Consensus 194 Neqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~---FrcaI~ 270 (399)
T KOG3847|consen 194 NEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD---FRCAIA 270 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc---eeeeee
Confidence 000 122333444433321 01 1368999999999999988887665 788888
Q ss_pred EcC
Q 020156 219 LCN 221 (330)
Q Consensus 219 ~~~ 221 (330)
+.+
T Consensus 271 lD~ 273 (399)
T KOG3847|consen 271 LDA 273 (399)
T ss_pred eee
Confidence 765
No 155
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.96 E-value=2.9e-05 Score=71.10 Aligned_cols=104 Identities=24% Similarity=0.299 Sum_probs=75.0
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcE---EEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEE
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWR---VVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLY 189 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~---v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~ 189 (330)
.-+++++||+.++.. . +..+...+...||. +..+++++. . .........+.+...|+.+....+..++.
T Consensus 59 ~~pivlVhG~~~~~~-~-~~~~~~~~~~~g~~~~~~~~~~~~~~-~-----~~~~~~~~~~ql~~~V~~~l~~~ga~~v~ 130 (336)
T COG1075 59 KEPIVLVHGLGGGYG-N-FLPLDYRLAILGWLTNGVYAFELSGG-D-----GTYSLAVRGEQLFAYVDEVLAKTGAKKVN 130 (336)
T ss_pred CceEEEEccCcCCcc-h-hhhhhhhhcchHHHhccccccccccc-C-----CCccccccHHHHHHHHHHHHhhcCCCceE
Confidence 336999999944333 3 45666667777887 888888765 1 11222344566666677666666667999
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 190 AVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 190 lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
++||||||.++..++...+....|...+.+++|-.
T Consensus 131 LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 131 LIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred EEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 99999999999999999984444999999998854
No 156
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.94 E-value=0.00033 Score=59.71 Aligned_cols=110 Identities=19% Similarity=0.284 Sum_probs=79.0
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCC---cEEEEEcCCCCCCCCCC---CCCcc---CcChHHHHHHHHHHHHH
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKG---WRVVVFNSRGCGDSPVT---TPQFY---SASFLGDMQEVVAHVGS 181 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g---~~v~~~d~rG~G~S~~~---~~~~~---~~~~~~D~~~~i~~l~~ 181 (330)
.+++.+++++|.+|... |...++..+.++- ..++.+-.-||..-+.. ..... .-...+.+..-++++++
T Consensus 27 ~~~~li~~IpGNPG~~g--FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG--FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCceEEEEecCCCCchh--HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 37899999999998654 4567777765443 55999999999876522 11111 12345677788888888
Q ss_pred hCCCC-cEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 182 KYPKA-HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 182 ~~~~~-~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
-.|+. +++++|||-|+++.+..+-.....-.|..++++-|.
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 77754 899999999999999998755544457788877655
No 157
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.92 E-value=0.00091 Score=60.55 Aligned_cols=115 Identities=13% Similarity=0.216 Sum_probs=77.0
Q ss_pred CCCcEEEEeCCCCCCCc-hHHHHHHHHHHHhCCcEEEEEcCCCC--CCCCCC-----------CCCccC-----------
Q 020156 111 PDSPVLILMPGLTGGSE-DSYVRHMLLRARSKGWRVVVFNSRGC--GDSPVT-----------TPQFYS----------- 165 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~-~~~~~~~~~~~~~~g~~v~~~d~rG~--G~S~~~-----------~~~~~~----------- 165 (330)
..+..||++||.+.+.. ...+..+-..|.++||.++++..+.- ...+.. ......
T Consensus 85 ~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 164 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQ 164 (310)
T ss_pred CCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCcccccc
Confidence 35678999999976554 24566677788899999999999871 111000 000000
Q ss_pred ---------cChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHh
Q 020156 166 ---------ASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 166 ---------~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~ 227 (330)
.....-+.++++++..+ +..+++++||+.|+.+++.|+.+.+.. .+++.|+|++-+....
T Consensus 165 ~~~~~~~~~~~~~ari~Aa~~~~~~~-~~~~ivlIg~G~gA~~~~~~la~~~~~-~~daLV~I~a~~p~~~ 233 (310)
T PF12048_consen 165 EAEAREAYEERLFARIEAAIAFAQQQ-GGKNIVLIGHGTGAGWAARYLAEKPPP-MPDALVLINAYWPQPD 233 (310)
T ss_pred HhHHhHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHhcCCCc-ccCeEEEEeCCCCcch
Confidence 12233455555555554 555699999999999999999988753 2789999887764433
No 158
>PRK04940 hypothetical protein; Provisional
Probab=97.81 E-value=0.00021 Score=58.74 Aligned_cols=38 Identities=13% Similarity=-0.136 Sum_probs=31.7
Q ss_pred CcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHhh
Q 020156 186 AHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIA 228 (330)
Q Consensus 186 ~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~~ 228 (330)
.++.+||.||||+.|..++.+++- .+|+++|...+...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~-----~aVLiNPAv~P~~~ 97 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGI-----RQVIFNPNLFPEEN 97 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCC-----CEEEECCCCChHHH
Confidence 379999999999999999999873 57888888876543
No 159
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.81 E-value=0.00018 Score=64.69 Aligned_cols=113 Identities=14% Similarity=0.173 Sum_probs=74.1
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCc--EEEEEcCCCCCCCCC-CCCCccCcChHHHHHHHHHHHHHhCCCCc
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGW--RVVVFNSRGCGDSPV-TTPQFYSASFLGDMQEVVAHVGSKYPKAH 187 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~--~v~~~d~rG~G~S~~-~~~~~~~~~~~~D~~~~i~~l~~~~~~~~ 187 (330)
..+.++|++||+.-+-. .-+...++-....|+ .+++|-||-.|.--. ...+-+...-..++..++.+|..+-+..+
T Consensus 114 ~~k~vlvFvHGfNntf~-dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFE-DAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCCchh-HHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 46788999999965433 334556555666664 578899996664211 11111122234688999999999877779
Q ss_pred EEEEEEcHHHHHHHHHHhhcCCC------CCcceEEEEcCCCC
Q 020156 188 LYAVGWSLGANILIRYLGHESHS------CPLSGAVSLCNPFN 224 (330)
Q Consensus 188 i~lvG~SlGg~ia~~~a~~~~~~------~~i~~~v~~~~p~d 224 (330)
|++++||||..+++..+.+.--+ ..|+-.|+-++-.|
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 99999999999999876443211 23555665555444
No 160
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.78 E-value=8.2e-05 Score=69.62 Aligned_cols=86 Identities=14% Similarity=0.283 Sum_probs=67.2
Q ss_pred HHHHHHHHHHhCCcEE------EEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHH
Q 020156 130 YVRHMLLRARSKGWRV------VVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRY 203 (330)
Q Consensus 130 ~~~~~~~~~~~~g~~v------~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~ 203 (330)
++..+++.|.+.||.. .-+|+|= +.. ....+...+...|+.+.+.. +.+++++||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~~~-----~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---SPA-----ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---chh-----hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHH
Confidence 5788999999888742 3378882 211 23466788999999888775 6799999999999999999
Q ss_pred HhhcCCC----CCcceEEEEcCCCC
Q 020156 204 LGHESHS----CPLSGAVSLCNPFN 224 (330)
Q Consensus 204 a~~~~~~----~~i~~~v~~~~p~d 224 (330)
+...+.. ..|++.|.+++|+.
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCC
Confidence 9887542 35999999999984
No 161
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.74 E-value=0.00021 Score=69.95 Aligned_cols=109 Identities=14% Similarity=0.171 Sum_probs=66.8
Q ss_pred CCCCcEEEEeCCCCCCCchHHHHHHHHHHHh----------------CCcEEEEEcCCCCCCCCCCCCCccCcChHHHHH
Q 020156 110 PPDSPVLILMPGLTGGSEDSYVRHMLLRARS----------------KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQ 173 (330)
Q Consensus 110 ~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~----------------~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~ 173 (330)
..++-+|++++|..|+-.. +|.++..+.. ..|+.+++|+-+- -.. ...-...+.++-+.
T Consensus 86 elsGIPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe--~tA-m~G~~l~dQtEYV~ 160 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE--FTA-MHGHILLDQTEYVN 160 (973)
T ss_pred cCCCceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch--hhh-hccHhHHHHHHHHH
Confidence 4456779999999886654 5766655431 2356667766320 000 01112245566777
Q ss_pred HHHHHHHHhCCC---------CcEEEEEEcHHHHHHHHHHhhcCCC-CCcceEEEEcCCC
Q 020156 174 EVVAHVGSKYPK---------AHLYAVGWSLGANILIRYLGHESHS-CPLSGAVSLCNPF 223 (330)
Q Consensus 174 ~~i~~l~~~~~~---------~~i~lvG~SlGg~ia~~~a~~~~~~-~~i~~~v~~~~p~ 223 (330)
++|+++...|.+ ..++++||||||.+|...+...... ..|.-.+..++|.
T Consensus 161 dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 161 DAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 777777654422 2499999999999998776533221 2366777777764
No 162
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.72 E-value=5.8e-05 Score=62.64 Aligned_cols=132 Identities=20% Similarity=0.279 Sum_probs=74.8
Q ss_pred CEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHH--HHHHHHhCCcEEEEEcC--CCCC---CCCC----CCCCc
Q 020156 95 GSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRH--MLLRARSKGWRVVVFNS--RGCG---DSPV----TTPQF 163 (330)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~--~~~~~~~~g~~v~~~d~--rG~G---~S~~----~~~~~ 163 (330)
..+....+.|+.......-|+|.++-|++.... +++.. +...+.++|+.|+.+|- ||+- +.+. ....+
T Consensus 26 c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~-Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGF 104 (283)
T KOG3101|consen 26 CSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHE-NFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGF 104 (283)
T ss_pred cceEEEEecCCCcccCCcCceEEEecCCcccch-hhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCcee
Confidence 344444444443233334689999999987554 44432 34556788999999996 5542 2210 00112
Q ss_pred cC----cChHHHHHHHHHHHHHhC-----------CCCcEEEEEEcHHHHHHHHHHhhcCCC-CCcceEEEEcCCCChHh
Q 020156 164 YS----ASFLGDMQEVVAHVGSKY-----------PKAHLYAVGWSLGANILIRYLGHESHS-CPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 164 ~~----~~~~~D~~~~i~~l~~~~-----------~~~~i~lvG~SlGg~ia~~~a~~~~~~-~~i~~~v~~~~p~d~~~ 227 (330)
+. +.|.... .+.+|+.++. ...++.+.||||||.=|+-.+.+.+.+ ..+.+..-+|+|.+-.-
T Consensus 105 YvnAt~epw~~~y-rMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpW 183 (283)
T KOG3101|consen 105 YVNATQEPWAKHY-RMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPW 183 (283)
T ss_pred EEecccchHhhhh-hHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcc
Confidence 22 1222211 1222222221 123789999999999888776666654 34777777788776443
Q ss_pred h
Q 020156 228 A 228 (330)
Q Consensus 228 ~ 228 (330)
.
T Consensus 184 G 184 (283)
T KOG3101|consen 184 G 184 (283)
T ss_pred h
Confidence 3
No 163
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.72 E-value=2.5e-05 Score=66.83 Aligned_cols=52 Identities=15% Similarity=0.181 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 170 GDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 170 ~D~~~~i~~l~~~~--~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
+-+..+++||+.+- ...+|.++|.|.||-+|+.+|+.+++ |+++|+++++.-
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~---i~avVa~~ps~~ 57 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ---ISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS---EEEEEEES--SB
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC---ccEEEEeCCcee
Confidence 34567899998762 12489999999999999999999995 999999887653
No 164
>PLN02606 palmitoyl-protein thioesterase
Probab=97.69 E-value=0.00099 Score=59.12 Aligned_cols=104 Identities=14% Similarity=0.147 Sum_probs=63.8
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHh--CCCCcEEE
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSK-GWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK--YPKAHLYA 190 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~-g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~--~~~~~i~l 190 (330)
.+||+.||++.+....-+..+.+.+.+. |.-+..+- .|-+. ..-+.....+.+..+.+.+... ..+ -+.+
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~-----~~s~~~~~~~Qv~~vce~l~~~~~L~~-G~na 99 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV-----QDSLFMPLRQQASIACEKIKQMKELSE-GYNI 99 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc-----ccccccCHHHHHHHHHHHHhcchhhcC-ceEE
Confidence 4599999997222222356666666423 55443333 23221 1111123345555555555541 222 4999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
+|+|.||.++-.++.+.++..+|+..|.+++|-.
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 9999999999999998876335999999998853
No 165
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.69 E-value=0.00047 Score=57.36 Aligned_cols=113 Identities=15% Similarity=0.203 Sum_probs=75.6
Q ss_pred CCcEEEEeCCCCCCCchHHHHH--------------HHHHHHhCCcEEEEEcCCCCCC--CCCCCCCccCcChHHHHHHH
Q 020156 112 DSPVLILMPGLTGGSEDSYVRH--------------MLLRARSKGWRVVVFNSRGCGD--SPVTTPQFYSASFLGDMQEV 175 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~--------------~~~~~~~~g~~v~~~d~rG~G~--S~~~~~~~~~~~~~~D~~~~ 175 (330)
....+|++||.+--....|.++ ++..+.+.||.|++.|.--+-. .....+..+...-++.+..+
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yv 179 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYV 179 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHH
Confidence 5568999999752222233333 4566788999999998753221 11223444444555666655
Q ss_pred HHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 176 VAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 176 i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
..++........++++.||.||...+.+..+.|+...|.+..+..+++.
T Consensus 180 w~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 180 WKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMG 228 (297)
T ss_pred HHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccccc
Confidence 5555544344589999999999999999999998766777777766653
No 166
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.62 E-value=0.00098 Score=55.96 Aligned_cols=85 Identities=15% Similarity=0.025 Sum_probs=54.5
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC
Q 020156 131 VRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS 210 (330)
Q Consensus 131 ~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~ 210 (330)
+..+...+ ...+.|+.+|.+|++.+.... ......+...++.+....+..++.++|||+||.++...+....+.
T Consensus 15 ~~~~~~~l-~~~~~v~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 15 YARLAAAL-RGRRDVSALPLPGFGPGEPLP-----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred HHHHHHhc-CCCccEEEecCCCCCCCCCCC-----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 35555555 456899999999998654321 122223333445555555566899999999999998888764321
Q ss_pred -CCcceEEEEcC
Q 020156 211 -CPLSGAVSLCN 221 (330)
Q Consensus 211 -~~i~~~v~~~~ 221 (330)
..+.+++++..
T Consensus 89 ~~~~~~l~~~~~ 100 (212)
T smart00824 89 GIPPAAVVLLDT 100 (212)
T ss_pred CCCCcEEEEEcc
Confidence 12667766654
No 167
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.58 E-value=0.0015 Score=59.93 Aligned_cols=112 Identities=15% Similarity=0.131 Sum_probs=68.0
Q ss_pred CCCCcEEEEeCCCCCCCc--hHHHHHH--HHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCC
Q 020156 110 PPDSPVLILMPGLTGGSE--DSYVRHM--LLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPK 185 (330)
Q Consensus 110 ~~~~p~vv~~HG~~g~~~--~~~~~~~--~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 185 (330)
+...|+||++||.+=... ...+..+ ...+.. .-.+++.||.-... . ........+..++.+..++|.+..+.
T Consensus 119 pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~-~--~~~~~yPtQL~qlv~~Y~~Lv~~~G~ 194 (374)
T PF10340_consen 119 PKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSS-D--EHGHKYPTQLRQLVATYDYLVESEGN 194 (374)
T ss_pred CCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEecccccc-c--cCCCcCchHHHHHHHHHHHHHhccCC
Confidence 345699999999751111 1111111 122233 56899999975430 0 01122235668888888999866677
Q ss_pred CcEEEEEEcHHHHHHHHHHhhcCCC---CCcceEEEEcCCCCh
Q 020156 186 AHLYAVGWSLGANILIRYLGHESHS---CPLSGAVSLCNPFNL 225 (330)
Q Consensus 186 ~~i~lvG~SlGg~ia~~~a~~~~~~---~~i~~~v~~~~p~d~ 225 (330)
.+|+++|-|.||++++.++...... ..-+++|+++|=.++
T Consensus 195 ~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 195 KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 7999999999999999877543221 113566666654343
No 168
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.54 E-value=0.00048 Score=57.75 Aligned_cols=112 Identities=16% Similarity=0.173 Sum_probs=81.2
Q ss_pred CCcEEEEeCCCCCCC-chHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 112 DSPVLILMPGLTGGS-EDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~-~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
.+--||++-|++.+. ...|...++..+.+.+|..+-+-.+.+ .......+..+..+|+..+++++....-...|++
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ss---y~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSS---YNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccc---ccccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 345689998886543 356888899999999999999887622 1112223445678999999999887644558999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChH
Q 020156 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~ 226 (330)
+|||.|..=.+.|+...--...|.++|+.++.-|-+
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 999999999999984332222388888888776643
No 169
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.44 E-value=0.00043 Score=55.85 Aligned_cols=56 Identities=14% Similarity=0.064 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC--CCcceEEEEcCCCC
Q 020156 169 LGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS--CPLSGAVSLCNPFN 224 (330)
Q Consensus 169 ~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~--~~i~~~v~~~~p~d 224 (330)
...+...++....++|..++.++||||||.+|..++...... ..+..++..++|-.
T Consensus 11 ~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 11 ANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 456666666666667888999999999999999988877652 12667888887753
No 170
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.31 E-value=0.0022 Score=60.48 Aligned_cols=138 Identities=16% Similarity=0.161 Sum_probs=79.7
Q ss_pred ceEEEEcC--CCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHH----HH--------------hCCcE
Q 020156 85 KRECIRTK--DDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLR----AR--------------SKGWR 144 (330)
Q Consensus 85 ~~~~~~~~--dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~----~~--------------~~g~~ 144 (330)
..-.++.. .+..+.+.+++..+ .++++|+||.+.|.+|+|.. +-.+.+. +. .+-.+
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~SS~--~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an 87 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRN--DPEDDPLILWLNGGPGCSSM--WGLFGENGPFRINPDGPYTLEDNPYSWNKFAN 87 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SS--GGCSS-EEEEEE-TTTB-TH--HHHHCTTSSEEEETTSTSEEEE-TT-GGGTSE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCC--CCCCccEEEEecCCceeccc--cccccccCceEEeecccccccccccccccccc
Confidence 34445555 45566655555442 45688999999999998763 1111100 00 01258
Q ss_pred EEEEc-CCCCCCCCCCCCCc---cCcChHHHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhh---cCC-----
Q 020156 145 VVVFN-SRGCGDSPVTTPQF---YSASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGH---ESH----- 209 (330)
Q Consensus 145 v~~~d-~rG~G~S~~~~~~~---~~~~~~~D~~~~i~~l~~~~~---~~~i~lvG~SlGg~ia~~~a~~---~~~----- 209 (330)
++.+| .-|.|.|....... .....++|+.++++..-.++| ..++++.|-|+||..+..+|.. ...
T Consensus 88 ~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~ 167 (415)
T PF00450_consen 88 LLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQP 167 (415)
T ss_dssp EEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--ST
T ss_pred eEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccc
Confidence 99999 55999997655543 234456677777766655555 4599999999999977666532 221
Q ss_pred CCCcceEEEEcCCCChH
Q 020156 210 SCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 210 ~~~i~~~v~~~~p~d~~ 226 (330)
...++++++.++-.+..
T Consensus 168 ~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 168 KINLKGIAIGNGWIDPR 184 (415)
T ss_dssp TSEEEEEEEESE-SBHH
T ss_pred ccccccceecCcccccc
Confidence 23477766655555554
No 171
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.27 E-value=0.012 Score=48.47 Aligned_cols=109 Identities=20% Similarity=0.204 Sum_probs=67.7
Q ss_pred CCcEEEEeCCCCCCCchH---HHH---HHHHHH------HhCCcEEEEEcCCCCCCCC-CCCCCccC----cChHHHHHH
Q 020156 112 DSPVLILMPGLTGGSEDS---YVR---HMLLRA------RSKGWRVVVFNSRGCGDSP-VTTPQFYS----ASFLGDMQE 174 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~---~~~---~~~~~~------~~~g~~v~~~d~rG~G~S~-~~~~~~~~----~~~~~D~~~ 174 (330)
...+.++++|...+.... +.. .+...+ ...+=++-++-|-|+- ++ ........ ..-..++..
T Consensus 18 A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYd-aP~~~~~~a~~~~~A~~ga~~L~~ 96 (177)
T PF06259_consen 18 ADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYD-APAGGLPDAASPGYARAGAPRLAR 96 (177)
T ss_pred cCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCC-CCCCccccccCchHHHHHHHHHHH
Confidence 556889999987544321 111 111111 1123355555555542 22 11111111 233568888
Q ss_pred HHHHHHHhC-CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 175 VVAHVGSKY-PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 175 ~i~~l~~~~-~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
+++-|+... +..++.++|||+|+.++-..+.+.+.. ++.+|.+++|-
T Consensus 97 f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~--vddvv~~GSPG 144 (177)
T PF06259_consen 97 FLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLR--VDDVVLVGSPG 144 (177)
T ss_pred HHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCC--cccEEEECCCC
Confidence 999888877 677999999999999998888775555 89999998875
No 172
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.25 E-value=0.0022 Score=58.73 Aligned_cols=105 Identities=18% Similarity=0.207 Sum_probs=76.8
Q ss_pred cEEEEeCCCCCCCch-----HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC----------CccCcChHHHHHHHHHH
Q 020156 114 PVLILMPGLTGGSED-----SYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP----------QFYSASFLGDMQEVVAH 178 (330)
Q Consensus 114 p~vv~~HG~~g~~~~-----~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~----------~~~~~~~~~D~~~~i~~ 178 (330)
.+|++--|..|+.+. .+++.++ .+.+--+|...+|-+|+|-.-.. -++.++...|...+|.+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~A---p~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLA---PELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhh---HhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 457777888765441 2333333 34466789999999999842111 12334556799999999
Q ss_pred HHHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 179 VGSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 179 l~~~~~--~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
++.... ..+++++|-|+||+++..+=.++|.- +.++++-++|.
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHi--v~GAlAaSAPv 202 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHI--VLGALAASAPV 202 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhh--hhhhhhccCce
Confidence 988753 34999999999999999999999998 88888888875
No 173
>COG3150 Predicted esterase [General function prediction only]
Probab=97.23 E-value=0.0025 Score=51.22 Aligned_cols=93 Identities=13% Similarity=0.036 Sum_probs=52.6
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcH
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSL 195 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~Sl 195 (330)
||++||+.++..+.= ..+...+.++. .|-.+.+.... . ....++.+.++.+..+.......++|-|+
T Consensus 2 ilYlHGFnSSP~shk-a~l~~q~~~~~-------~~~i~y~~p~l-~----h~p~~a~~ele~~i~~~~~~~p~ivGssL 68 (191)
T COG3150 2 ILYLHGFNSSPGSHK-AVLLLQFIDED-------VRDIEYSTPHL-P----HDPQQALKELEKAVQELGDESPLIVGSSL 68 (191)
T ss_pred eEEEecCCCCcccHH-HHHHHHHHhcc-------ccceeeecCCC-C----CCHHHHHHHHHHHHHHcCCCCceEEeecc
Confidence 899999987554322 22222332322 22222222111 1 12244444455554555555799999999
Q ss_pred HHHHHHHHHhhcCCCCCcceEEEEcCCCChH
Q 020156 196 GANILIRYLGHESHSCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 196 Gg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~ 226 (330)
||+.+.+++.+++ | ++|++++...+.
T Consensus 69 GGY~At~l~~~~G----i-rav~~NPav~P~ 94 (191)
T COG3150 69 GGYYATWLGFLCG----I-RAVVFNPAVRPY 94 (191)
T ss_pred hHHHHHHHHHHhC----C-hhhhcCCCcCch
Confidence 9999999998887 4 355566655443
No 174
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.20 E-value=0.0064 Score=56.09 Aligned_cols=45 Identities=13% Similarity=0.185 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhCC----CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEE
Q 020156 171 DMQEVVAHVGSKYP----KAHLYAVGWSLGANILIRYLGHESHSCPLSGAV 217 (330)
Q Consensus 171 D~~~~i~~l~~~~~----~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v 217 (330)
|+..++.++.+.++ +-|++++|+|.||+++...|.-.|-. +++++
T Consensus 165 D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~--~~~~i 213 (403)
T PF11144_consen 165 DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWL--FDGVI 213 (403)
T ss_pred HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccc--eeEEE
Confidence 88888888877664 23899999999999999998888876 55544
No 175
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.19 E-value=0.0012 Score=52.18 Aligned_cols=56 Identities=14% Similarity=0.222 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC----CCcceEEEEcCCC
Q 020156 168 FLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS----CPLSGAVSLCNPF 223 (330)
Q Consensus 168 ~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~----~~i~~~v~~~~p~ 223 (330)
+.+.+.+.++.+..++++.++.+.|||+||.+|..++....+. .....++..++|-
T Consensus 46 ~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~ 105 (140)
T PF01764_consen 46 LYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPR 105 (140)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S-
T ss_pred HHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCcc
Confidence 3456666777777788888999999999999999888654321 1134566666653
No 176
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.18 E-value=0.0035 Score=55.82 Aligned_cols=104 Identities=14% Similarity=0.165 Sum_probs=64.9
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHH--hCCCCcEE
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGS--KYPKAHLY 189 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~-~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~--~~~~~~i~ 189 (330)
..++|+.||++.+....-+..+.+.+.+ -|.-+..+.. |.+. ..-+.....+.+..+.+.+.. +..+ -+.
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~---~~s~~~~~~~Qve~vce~l~~~~~l~~-G~n 97 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV---GDSWLMPLTQQAEIACEKVKQMKELSQ-GYN 97 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc---cccceeCHHHHHHHHHHHHhhchhhhC-cEE
Confidence 3459999999654443334555555533 2555544432 3331 112223344555555555544 2222 499
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 190 AVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 190 lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
++|+|.||.++-.++.+.++..+|+..|++++|-
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 9999999999999999888633599999999885
No 177
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.17 E-value=0.00045 Score=65.78 Aligned_cols=106 Identities=19% Similarity=0.220 Sum_probs=65.3
Q ss_pred CCcEEEEeCCCC-CCCchHHHHHHHHHHHhCC--cEEEEEcCCC-CCCCCCCCCCccCcChHHHHHHHHH----HHHHhC
Q 020156 112 DSPVLILMPGLT-GGSEDSYVRHMLLRARSKG--WRVVVFNSRG-CGDSPVTTPQFYSASFLGDMQEVVA----HVGSKY 183 (330)
Q Consensus 112 ~~p~vv~~HG~~-g~~~~~~~~~~~~~~~~~g--~~v~~~d~rG-~G~S~~~~~~~~~~~~~~D~~~~i~----~l~~~~ 183 (330)
..|.++++||.. ....+.+.+.+...+...| -.+..||++. +|+ .......+-+..+.+ .+..++
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-------~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-------ANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-------cchHHHHHHHHHHhhhhhhhhhccC
Confidence 568899999987 3333333455555554334 5567788873 333 111222233333333 334467
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 184 PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 184 ~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
+..+|+++|+|||+.++......+.+. .|+++|+++-|++-
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv-~V~~vVCigypl~~ 288 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDV-EVDAVVCIGYPLDT 288 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCc-eEEEEEEecccccC
Confidence 888999999999988888776655543 28888888777653
No 178
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.13 E-value=0.00044 Score=65.97 Aligned_cols=135 Identities=16% Similarity=0.056 Sum_probs=96.0
Q ss_pred EEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC----
Q 020156 87 ECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ---- 162 (330)
Q Consensus 87 ~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~---- 162 (330)
...+..||..|.+..+. .+.... +.|++|.-.|.-.-+...........++++|...+.-|.||-|+-...+.+
T Consensus 397 ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k 474 (648)
T COG1505 397 FFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMK 474 (648)
T ss_pred EEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhh
Confidence 33466799999887765 221122 678888777655444433333444677899999999999998876544322
Q ss_pred ccCcChHHHHHHHHHHHHHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 163 FYSASFLGDMQEVVAHVGSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 163 ~~~~~~~~D~~~~i~~l~~~~~--~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
..-....+|..++.+.|.++.- ..++.+.|-|=||.+.-..+.++|+. +.++|+-.+..|+
T Consensus 475 ~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPel--fgA~v~evPllDM 537 (648)
T COG1505 475 ENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPEL--FGAAVCEVPLLDM 537 (648)
T ss_pred hcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhh--hCceeeccchhhh
Confidence 2224456899999999988732 33799999999999999999999997 7676666665564
No 179
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.11 E-value=0.0036 Score=54.14 Aligned_cols=102 Identities=15% Similarity=0.177 Sum_probs=64.1
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHH--hCCCCcEEE
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSK-GWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGS--KYPKAHLYA 190 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~-g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~--~~~~~~i~l 190 (330)
-++|++||+..+..+.-+..+.+.+.+. |..|.++|. |-| - ...+..-..+.+..+.+.+.. +.++ -+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~---~~s~l~pl~~Qv~~~ce~v~~m~~lsq-Gyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--I---KDSSLMPLWEQVDVACEKVKQMPELSQ-GYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--c---chhhhccHHHHHHHHHHHHhcchhccC-ceEE
Confidence 4599999997655433345565555443 677777776 333 1 111112233444444454443 2232 5899
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
+|.|.||.++-.++...++ .+|+..|.+++|-
T Consensus 97 vg~SQGglv~Raliq~cd~-ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDN-PPVKNFISLGGPH 128 (296)
T ss_pred EEEccccHHHHHHHHhCCC-CCcceeEeccCCc
Confidence 9999999999777766665 6799999999884
No 180
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.98 E-value=0.0019 Score=55.84 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC--CCcceEEEEcCCC
Q 020156 169 LGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS--CPLSGAVSLCNPF 223 (330)
Q Consensus 169 ~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~--~~i~~~v~~~~p~ 223 (330)
.+++...++.+.+++|+.++.+.||||||.+|..++...... .....++..++|-
T Consensus 111 ~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 111 YNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 345666666677778888999999999999999888764321 1134566666654
No 181
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.96 E-value=0.0033 Score=57.74 Aligned_cols=108 Identities=16% Similarity=0.158 Sum_probs=85.7
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC---CCCCccCcChHHHHHHHHHHHHHhCCCCc
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPV---TTPQFYSASFLGDMQEVVAHVGSKYPKAH 187 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~---~~~~~~~~~~~~D~~~~i~~l~~~~~~~~ 187 (330)
.++|+|+..-|+...... .-.... .++ +-+-+.+.+|-+|.|.. .+..++....+.|.+.+++.++.-|++ +
T Consensus 61 ~drPtV~~T~GY~~~~~p-~r~Ept-~Ll--d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~-k 135 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSP-RRSEPT-QLL--DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPG-K 135 (448)
T ss_pred CCCCeEEEecCcccccCc-cccchh-Hhh--ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccC-C
Confidence 378999999999764332 212222 222 35678999999999953 344577777889999999999998877 7
Q ss_pred EEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 188 LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 188 i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
++-.|.|=||+.++.+=.-+|+. |++.|.-.+|.+.
T Consensus 136 WISTG~SKGGmTa~y~rrFyP~D--VD~tVaYVAP~~~ 171 (448)
T PF05576_consen 136 WISTGGSKGGMTAVYYRRFYPDD--VDGTVAYVAPNDV 171 (448)
T ss_pred ceecCcCCCceeEEEEeeeCCCC--CCeeeeeeccccc
Confidence 99999999999999998999998 9999999999764
No 182
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.91 E-value=0.026 Score=47.64 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHh
Q 020156 168 FLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLG 205 (330)
Q Consensus 168 ~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~ 205 (330)
+.+-+..+.+++.+..|-. .++|+|.|+.++..+++
T Consensus 88 ~eesl~yl~~~i~enGPFD--GllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 88 FEESLEYLEDYIKENGPFD--GLLGFSQGAALAALLAG 123 (230)
T ss_pred hHHHHHHHHHHHHHhCCCc--cccccchhHHHHHHhhc
Confidence 3445777788888876643 89999999999999887
No 183
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.86 E-value=0.018 Score=54.16 Aligned_cols=110 Identities=20% Similarity=0.270 Sum_probs=82.1
Q ss_pred CCcEEEEeCCCCCCCchHHH----HHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-------CccCcChHHHHHHHHHHHH
Q 020156 112 DSPVLILMPGLTGGSEDSYV----RHMLLRARSKGWRVVVFNSRGCGDSPVTTP-------QFYSASFLGDMQEVVAHVG 180 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~----~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~-------~~~~~~~~~D~~~~i~~l~ 180 (330)
+.|+-|+|-|=+..+ +.|+ ..+...+.+.|-.|+...+|-+|.|..... .++......|+.++|+.+.
T Consensus 85 ~gPiFLmIGGEgp~~-~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPES-DKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCceEEEEcCCCCCC-CCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 567777776643222 1111 134556677899999999999998732211 1334556789999999999
Q ss_pred HhCC---CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 181 SKYP---KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 181 ~~~~---~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
.+++ +.|++.+|-|+-|.++.++=..+|+. +.++|+-++|..
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel--~~GsvASSapv~ 208 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL--TVGSVASSAPVL 208 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchh--heeeccccccee
Confidence 8874 23899999999999999999999998 999999998863
No 184
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.81 E-value=0.0034 Score=42.30 Aligned_cols=47 Identities=21% Similarity=0.253 Sum_probs=27.9
Q ss_pred CCcceEEEEcCCCCEEEEEeecCCC--CCCCCCCcEEEEeCCCCCCCch
Q 020156 82 VKLKRECIRTKDDGSVALDWISGDH--QLLPPDSPVLILMPGLTGGSED 128 (330)
Q Consensus 82 ~~~~~~~~~~~dg~~~~~~~~~~~~--~~~~~~~p~vv~~HG~~g~~~~ 128 (330)
.+.+...++++||..+.+...+... ......+|+|++.||+.+++..
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 3457788999999999998776543 2234578999999999987764
No 185
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.80 E-value=0.052 Score=47.33 Aligned_cols=53 Identities=13% Similarity=0.148 Sum_probs=38.9
Q ss_pred HHHHHHHHH-HHHHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 169 LGDMQEVVA-HVGSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 169 ~~D~~~~i~-~l~~~~~--~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
.+.+.+-++ ++..+|. ..+-.++|||+||.+++..+..+|+. +....++++.+
T Consensus 117 ~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~--F~~y~~~SPSl 172 (264)
T COG2819 117 REFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDC--FGRYGLISPSL 172 (264)
T ss_pred HHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcch--hceeeeecchh
Confidence 344443333 4444443 34689999999999999999999998 88888888764
No 186
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.80 E-value=0.002 Score=62.02 Aligned_cols=89 Identities=10% Similarity=0.154 Sum_probs=62.6
Q ss_pred HHHHHHHHHhCCcE-----EEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHh
Q 020156 131 VRHMLLRARSKGWR-----VVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLG 205 (330)
Q Consensus 131 ~~~~~~~~~~~g~~-----v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~ 205 (330)
+..+++.|.+.||. ...+|+| .+... .-...++...+...|+.+....++.+++++||||||.+++.++.
T Consensus 158 w~kLIe~L~~iGY~~~nL~gAPYDWR---ls~~~--le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 158 WAVLIANLARIGYEEKNMYMAAYDWR---LSFQN--TEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred HHHHHHHHHHcCCCCCceeecccccc---cCccc--hhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHH
Confidence 37888999999985 3345555 11110 01124666889999998887766679999999999999998876
Q ss_pred hcC----------C---CCCcceEEEEcCCCC
Q 020156 206 HES----------H---SCPLSGAVSLCNPFN 224 (330)
Q Consensus 206 ~~~----------~---~~~i~~~v~~~~p~d 224 (330)
.-. . ...|++.|.+++|+.
T Consensus 233 wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 233 WVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred hccccccccCCcchHHHHHHHHHheecccccC
Confidence 321 0 135889999999873
No 187
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.69 E-value=0.0046 Score=53.19 Aligned_cols=53 Identities=21% Similarity=0.280 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC--CCcceEEEEcCCC
Q 020156 170 GDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS--CPLSGAVSLCNPF 223 (330)
Q Consensus 170 ~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~--~~i~~~v~~~~p~ 223 (330)
....+.++.+..++++ ++.+.|||+||++|..++....+. ..|..+....+|-
T Consensus 69 ~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 4555666666666666 599999999999999988874432 2388888888774
No 188
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.69 E-value=0.0035 Score=52.02 Aligned_cols=80 Identities=13% Similarity=0.116 Sum_probs=49.7
Q ss_pred cEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh--cCC--CCCcceEEE
Q 020156 143 WRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGH--ESH--SCPLSGAVS 218 (330)
Q Consensus 143 ~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~--~~~--~~~i~~~v~ 218 (330)
..+..++|+-..... .-......=+.++...|+....+-|+.+++++|+|.||.++..++.. .+. ...|.++|+
T Consensus 40 ~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 556667777433211 00001122246777777777778899999999999999999999887 111 023889999
Q ss_pred EcCCCC
Q 020156 219 LCNPFN 224 (330)
Q Consensus 219 ~~~p~d 224 (330)
++.|..
T Consensus 118 fGdP~~ 123 (179)
T PF01083_consen 118 FGDPRR 123 (179)
T ss_dssp ES-TTT
T ss_pred ecCCcc
Confidence 998865
No 189
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.68 E-value=0.0015 Score=60.85 Aligned_cols=91 Identities=11% Similarity=0.143 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHhCCcE------EEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHH
Q 020156 129 SYVRHMLLRARSKGWR------VVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIR 202 (330)
Q Consensus 129 ~~~~~~~~~~~~~g~~------v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~ 202 (330)
.|+..+++.+..-||. -..+|+|= |...+ --.+.+...+...|+...+..+..|+++++|||||.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~--e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNS--EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCCh--hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHH
Confidence 4677888888888886 35688872 21111 1113456788888998888878789999999999999999
Q ss_pred HHhhcCCC------CCcceEEEEcCCCC
Q 020156 203 YLGHESHS------CPLSGAVSLCNPFN 224 (330)
Q Consensus 203 ~a~~~~~~------~~i~~~v~~~~p~d 224 (330)
++...++. ..|++.+.+++|+-
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCchhc
Confidence 99888872 35778888888863
No 190
>PLN02454 triacylglycerol lipase
Probab=96.62 E-value=0.0069 Score=56.29 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=34.0
Q ss_pred ChHHHHHHHHHHHHHhCCCCc--EEEEEEcHHHHHHHHHHhhc
Q 020156 167 SFLGDMQEVVAHVGSKYPKAH--LYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~~~~~~--i~lvG~SlGg~ia~~~a~~~ 207 (330)
...+++...|+.+.++|+..+ |.+.||||||.+|+.+|.+.
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 345678888888888888765 99999999999999988653
No 191
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.58 E-value=0.031 Score=52.95 Aligned_cols=118 Identities=14% Similarity=0.186 Sum_probs=76.0
Q ss_pred cceEEEEcC--CCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHH-----HhCC-------------c
Q 020156 84 LKRECIRTK--DDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRA-----RSKG-------------W 143 (330)
Q Consensus 84 ~~~~~~~~~--dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~-----~~~g-------------~ 143 (330)
...-++... .+..+-+++++.+ ..+..+|.||.+.|.+|+|.- ..+..++ ...| -
T Consensus 44 ~ysGYv~v~~~~~~~LFYwf~eS~--~~P~~dPlvLWLnGGPGCSSl---~G~~~E~GPf~v~~~G~tL~~N~ySWnk~a 118 (454)
T KOG1282|consen 44 QYSGYVTVNESEGRQLFYWFFESE--NNPETDPLVLWLNGGPGCSSL---GGLFEENGPFRVKYNGKTLYLNPYSWNKEA 118 (454)
T ss_pred cccceEECCCCCCceEEEEEEEcc--CCCCCCCEEEEeCCCCCccch---hhhhhhcCCeEEcCCCCcceeCCccccccc
Confidence 344456655 4667776666654 245678999999999998863 2222221 1111 3
Q ss_pred EEEEEcCC-CCCCCCCCCCC---ccCcChHHHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhh
Q 020156 144 RVVVFNSR-GCGDSPVTTPQ---FYSASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 144 ~v~~~d~r-G~G~S~~~~~~---~~~~~~~~D~~~~i~~l~~~~~---~~~i~lvG~SlGg~ia~~~a~~ 206 (330)
+++-+|.| |.|-|-..++. ......++|...++...-+++| +.++++.|-|++|...-.+|.+
T Consensus 119 NiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 119 NILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred cEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHH
Confidence 67888887 78877533331 2234456788877765555665 5699999999999877776643
No 192
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.46 E-value=0.16 Score=44.10 Aligned_cols=103 Identities=13% Similarity=0.153 Sum_probs=62.0
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCC--CcEEEEE
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPK--AHLYAVG 192 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~--~~i~lvG 192 (330)
+||++=||.|... ..+....+...+.|++++.+-.+-.... .+. .....-+..+++.+...... .++.+-.
T Consensus 1 plvvl~gW~gA~~-~hl~KY~~~Y~~~g~~il~~~~~~~~~~---~~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H~ 73 (240)
T PF05705_consen 1 PLVVLLGWMGAKP-KHLAKYSDLYQDPGFDILLVTSPPADFF---WPS---KRLAPAADKLLELLSDSQSASPPPILFHS 73 (240)
T ss_pred CEEEEEeCCCCCH-HHHHHHHHHHHhcCCeEEEEeCCHHHHe---eec---cchHHHHHHHHHHhhhhccCCCCCEEEEE
Confidence 3677789986554 5556677777779999999876532111 011 23333444455555554222 2899999
Q ss_pred EcHHHHHHHHHHhh----c---CCCCC-cceEEEEcCCCC
Q 020156 193 WSLGANILIRYLGH----E---SHSCP-LSGAVSLCNPFN 224 (330)
Q Consensus 193 ~SlGg~ia~~~a~~----~---~~~~~-i~~~v~~~~p~d 224 (330)
+|.||......+.+ . ....+ +++.|.=+.|..
T Consensus 74 FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~ 113 (240)
T PF05705_consen 74 FSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGI 113 (240)
T ss_pred EECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCc
Confidence 99988877766541 1 11122 777777777743
No 193
>COG0627 Predicted esterase [General function prediction only]
Probab=96.40 E-value=0.0093 Score=53.95 Aligned_cols=113 Identities=24% Similarity=0.328 Sum_probs=65.7
Q ss_pred CCcEEEEeCCCCCCCchHHHHH-HHHHHHhCCcEEEEEcC--C------------CCCCC---CCCCC-CccC-cChHHH
Q 020156 112 DSPVLILMPGLTGGSEDSYVRH-MLLRARSKGWRVVVFNS--R------------GCGDS---PVTTP-QFYS-ASFLGD 171 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~-~~~~~~~~g~~v~~~d~--r------------G~G~S---~~~~~-~~~~-~~~~~D 171 (330)
+-|+++++||.+++....|... +-......|+.++..|- | |.+.| +-..+ .... ..|.+=
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 5688999999987643333222 22334556777777533 2 32222 00000 0011 222222
Q ss_pred HHH-HHHHHHHhCCC----CcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChH
Q 020156 172 MQE-VVAHVGSKYPK----AHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 172 ~~~-~i~~l~~~~~~----~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~ 226 (330)
+.+ +-..+.+.++. ..-.++||||||.=|+.+|..+|++ ++.+...++..+..
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~--f~~~sS~Sg~~~~s 190 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR--FKSASSFSGILSPS 190 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch--hceecccccccccc
Confidence 222 22233333441 2679999999999999999999988 88888888877654
No 194
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.34 E-value=0.0048 Score=54.37 Aligned_cols=107 Identities=16% Similarity=0.294 Sum_probs=49.3
Q ss_pred CCcEEEEeCCCCCCCc---h-HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCC--C
Q 020156 112 DSPVLILMPGLTGGSE---D-SYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYP--K 185 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~---~-~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~--~ 185 (330)
...+||+.||++.+.. . .-+..+++... -|--|..++. |.+.+.- ....+.....+.+..+.+.+... | .
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~-PG~yV~si~i-g~~~~~D-~~~s~f~~v~~Qv~~vc~~l~~~-p~L~ 79 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQH-PGTYVHSIEI-GNDPSED-VENSFFGNVNDQVEQVCEQLAND-PELA 79 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHS-TT--EEE--S-SSSHHHH-HHHHHHSHHHHHHHHHHHHHHH--GGGT
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhC-CCceEEEEEE-CCCcchh-hhhhHHHHHHHHHHHHHHHHhhC-hhhh
Confidence 3455999999964321 1 11223333322 3666666655 2111100 00011112223334444444432 1 1
Q ss_pred CcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 186 AHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 186 ~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
.-+.++|+|.||.++-.++.+.+.. +|+..|++++|-
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~-~V~nlISlggph 116 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDP-PVHNLISLGGPH 116 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS--EEEEEEES--T
T ss_pred cceeeeeeccccHHHHHHHHHCCCC-CceeEEEecCcc
Confidence 2599999999999999999888753 599999999885
No 195
>PLN02209 serine carboxypeptidase
Probab=96.31 E-value=0.069 Score=50.74 Aligned_cols=118 Identities=22% Similarity=0.231 Sum_probs=70.4
Q ss_pred ceEEEEcCC--CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHH----------------HHHh------
Q 020156 85 KRECIRTKD--DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLL----------------RARS------ 140 (330)
Q Consensus 85 ~~~~~~~~d--g~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~----------------~~~~------ 140 (330)
....++..+ +..+.+.+++.. ..++..|+++.+-|.+|+|... -.+.+ .+..
T Consensus 40 ~sGy~~v~~~~~~~lf~~f~es~--~~~~~~Pl~lWlnGGPG~SS~~--g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~ 115 (437)
T PLN02209 40 ETGYIGIGEEENVQFFYYFIKSD--KNPQEDPLIIWLNGGPGCSCLS--GLFFENGPLALKNKVYNGSVPSLVSTTYSWT 115 (437)
T ss_pred EEEEEEecCCCCeEEEEEEEecC--CCCCCCCEEEEECCCCcHHHhh--hHHHhcCCceeccCCCCCCcccceeCCCchh
Confidence 334455533 344454444433 2456789999999999987531 11110 1111
Q ss_pred CCcEEEEEc-CCCCCCCCCCCCC--ccCcChHHHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhh
Q 020156 141 KGWRVVVFN-SRGCGDSPVTTPQ--FYSASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 141 ~g~~v~~~d-~rG~G~S~~~~~~--~~~~~~~~D~~~~i~~l~~~~~---~~~i~lvG~SlGg~ia~~~a~~ 206 (330)
+-.+++.+| .-|.|-|-...+. ......++|+.++++..-+++| ..++++.|.|+||..+..+|..
T Consensus 116 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~ 187 (437)
T PLN02209 116 KTANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHE 187 (437)
T ss_pred hcCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHH
Confidence 124789999 5689988543322 1222345666666665555555 4589999999999877766643
No 196
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.29 E-value=0.044 Score=47.33 Aligned_cols=81 Identities=16% Similarity=0.197 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHH----HHHHHHHHHHHhCC----CCcEEEEEEcHHHHHH
Q 020156 129 SYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLG----DMQEVVAHVGSKYP----KAHLYAVGWSLGANIL 200 (330)
Q Consensus 129 ~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~----D~~~~i~~l~~~~~----~~~i~lvG~SlGg~ia 200 (330)
...+.+.+.+.++||.|++.=+.- .+.+...++ ..+.+++.+..... .-|++-+|||||+-+-
T Consensus 34 itYr~lLe~La~~Gy~ViAtPy~~---------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklh 104 (250)
T PF07082_consen 34 ITYRYLLERLADRGYAVIATPYVV---------TFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLH 104 (250)
T ss_pred HHHHHHHHHHHhCCcEEEEEecCC---------CCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHH
Confidence 445889999999999999987741 233333333 34445555554422 1378999999999998
Q ss_pred HHHHhhcCCCCCcceEEEEc
Q 020156 201 IRYLGHESHSCPLSGAVSLC 220 (330)
Q Consensus 201 ~~~a~~~~~~~~i~~~v~~~ 220 (330)
+.+...++.. -++-++++
T Consensus 105 lLi~s~~~~~--r~gniliS 122 (250)
T PF07082_consen 105 LLIGSLFDVE--RAGNILIS 122 (250)
T ss_pred HHHhhhccCc--ccceEEEe
Confidence 8877666544 34444443
No 197
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.29 E-value=0.054 Score=51.41 Aligned_cols=119 Identities=22% Similarity=0.185 Sum_probs=69.9
Q ss_pred eEEEEcCC--CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchH-HHHHHHH-------------HHHh------CCc
Q 020156 86 RECIRTKD--DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDS-YVRHMLL-------------RARS------KGW 143 (330)
Q Consensus 86 ~~~~~~~d--g~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~-~~~~~~~-------------~~~~------~g~ 143 (330)
.-.++..+ +..+.+++++.. ..+...|+|+.+-|.+|+|... .+..... .+.. +-.
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~--~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 116 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSE--NNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMA 116 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecC--CCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcC
Confidence 44455543 334444444433 2456789999999999977531 1111000 1100 125
Q ss_pred EEEEEc-CCCCCCCCCCCCCccCc--ChHHHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhh
Q 020156 144 RVVVFN-SRGCGDSPVTTPQFYSA--SFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 144 ~v~~~d-~rG~G~S~~~~~~~~~~--~~~~D~~~~i~~l~~~~~---~~~i~lvG~SlGg~ia~~~a~~ 206 (330)
+++.+| .-|.|.|-...+..... ..++|+.++++..-.++| +.+++++|.|+||..+..+|.+
T Consensus 117 nllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~ 185 (433)
T PLN03016 117 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 185 (433)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHH
Confidence 789999 56999886443322221 233567666665555555 4689999999999877766654
No 198
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.28 E-value=0.0092 Score=50.30 Aligned_cols=84 Identities=18% Similarity=0.083 Sum_probs=53.3
Q ss_pred hCCcEEEEEcCCCCCCCCCC-C----CCccCcChHHHHHHHHHHHHHhCC-CCcEEEEEEcHHHHHHHHHHhhcCCC---
Q 020156 140 SKGWRVVVFNSRGCGDSPVT-T----PQFYSASFLGDMQEVVAHVGSKYP-KAHLYAVGWSLGANILIRYLGHESHS--- 210 (330)
Q Consensus 140 ~~g~~v~~~d~rG~G~S~~~-~----~~~~~~~~~~D~~~~i~~l~~~~~-~~~i~lvG~SlGg~ia~~~a~~~~~~--- 210 (330)
..-.+|+++=||=....... . ......--..|+.++.++..++++ +++++++|||.|+.++..++.++-+.
T Consensus 43 ~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl 122 (207)
T PF11288_consen 43 NGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDPL 122 (207)
T ss_pred hcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCchH
Confidence 34468888888843221111 1 111112234799998887777665 45999999999999999999877322
Q ss_pred -CCcceEEEEcCCC
Q 020156 211 -CPLSGAVSLCNPF 223 (330)
Q Consensus 211 -~~i~~~v~~~~p~ 223 (330)
..+.++-+++-+.
T Consensus 123 ~~rLVAAYliG~~v 136 (207)
T PF11288_consen 123 RKRLVAAYLIGYPV 136 (207)
T ss_pred HhhhheeeecCccc
Confidence 2355666655543
No 199
>PLN02162 triacylglycerol lipase
Probab=96.20 E-value=0.015 Score=54.71 Aligned_cols=54 Identities=13% Similarity=0.192 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh---cCCC---CCcceEEEEcCCC
Q 020156 170 GDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGH---ESHS---CPLSGAVSLCNPF 223 (330)
Q Consensus 170 ~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~---~~~~---~~i~~~v~~~~p~ 223 (330)
..+++.++.+..++++.++++.|||+||.+|+.++.. .++. ..+.+++..+.|-
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPR 321 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPR 321 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCC
Confidence 3456666666667888899999999999999987652 2211 1245677777663
No 200
>PLN00413 triacylglycerol lipase
Probab=96.19 E-value=0.014 Score=55.05 Aligned_cols=53 Identities=17% Similarity=0.273 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhc----CCC--CCcceEEEEcCCC
Q 020156 171 DMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHE----SHS--CPLSGAVSLCNPF 223 (330)
Q Consensus 171 D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~----~~~--~~i~~~v~~~~p~ 223 (330)
.+...++.+..++|+.++++.|||+||.+|..++... +.. ..+..+...+.|-
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 5667777777788988999999999999999887531 111 1255667777663
No 201
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.17 E-value=0.014 Score=51.65 Aligned_cols=111 Identities=17% Similarity=0.143 Sum_probs=68.4
Q ss_pred CCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCC----cEEEEEcCCCCCCCCCCCCCc-cCcChHHHHH-HHHHHHHH
Q 020156 108 LLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKG----WRVVVFNSRGCGDSPVTTPQF-YSASFLGDMQ-EVVAHVGS 181 (330)
Q Consensus 108 ~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g----~~v~~~d~rG~G~S~~~~~~~-~~~~~~~D~~-~~i~~l~~ 181 (330)
+...+.|++++.||-.-. +..-+....+.+...| -.++.+|+- +.......+ .+.++.+.+. +++=++.+
T Consensus 93 ~~~~k~pvl~~~DG~~~~-~~g~i~~~~dsli~~g~i~pai~vgid~~---d~~~R~~~~~~n~~~~~~L~~eLlP~v~~ 168 (299)
T COG2382 93 NPLEKYPVLYLQDGQDWF-RSGRIPRILDSLIAAGEIPPAILVGIDYI---DVKKRREELHCNEAYWRFLAQELLPYVEE 168 (299)
T ss_pred CccccccEEEEeccHHHH-hcCChHHHHHHHHHcCCCCCceEEecCCC---CHHHHHHHhcccHHHHHHHHHHhhhhhhc
Confidence 345588999999985211 1111234566666665 345666653 111111112 2233444443 45667888
Q ss_pred hCCCC----cEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCC
Q 020156 182 KYPKA----HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (330)
Q Consensus 182 ~~~~~----~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d 224 (330)
+|+.. .-+++|.|+||.+++..+..+|+. +-.+++-++.++
T Consensus 169 ~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~--FG~V~s~Sps~~ 213 (299)
T COG2382 169 RYPTSADADGRVLAGDSLGGLVSLYAGLRHPER--FGHVLSQSGSFW 213 (299)
T ss_pred cCcccccCCCcEEeccccccHHHHHHHhcCchh--hceeeccCCccc
Confidence 88643 458999999999999999999998 766666666553
No 202
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.16 E-value=0.018 Score=52.71 Aligned_cols=89 Identities=16% Similarity=0.184 Sum_probs=66.0
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEE
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 193 (330)
-.-||.-|=+|.. ..-+....+|.++|+.|+.+|.--+=-|. -+-+...+|+..+|++...+++..++.++|+
T Consensus 261 ~~av~~SGDGGWr--~lDk~v~~~l~~~gvpVvGvdsLRYfW~~-----rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGy 333 (456)
T COG3946 261 TVAVFYSGDGGWR--DLDKEVAEALQKQGVPVVGVDSLRYFWSE-----RTPEQIAADLSRLIRFYARRWGAKRVLLIGY 333 (456)
T ss_pred eEEEEEecCCchh--hhhHHHHHHHHHCCCceeeeehhhhhhcc-----CCHHHHHHHHHHHHHHHHHhhCcceEEEEee
Confidence 3456666654422 23467788899999999999975433222 2235678999999999999999889999999
Q ss_pred cHHHHHHHHHHhhcCC
Q 020156 194 SLGANILIRYLGHESH 209 (330)
Q Consensus 194 SlGg~ia~~~a~~~~~ 209 (330)
|+|+=+.-..-.+.|.
T Consensus 334 SfGADvlP~~~n~L~~ 349 (456)
T COG3946 334 SFGADVLPFAYNRLPP 349 (456)
T ss_pred cccchhhHHHHHhCCH
Confidence 9999888776665554
No 203
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.06 E-value=0.046 Score=53.65 Aligned_cols=124 Identities=15% Similarity=0.061 Sum_probs=69.7
Q ss_pred EEEEEeecCCCCCCCCCCcEEEEeCCCCCCCch--HH-HHHHHHHHHhCCcEEEEEcCC----CCCCCCCCCCCccCcCh
Q 020156 96 SVALDWISGDHQLLPPDSPVLILMPGLTGGSED--SY-VRHMLLRARSKGWRVVVFNSR----GCGDSPVTTPQFYSASF 168 (330)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~--~~-~~~~~~~~~~~g~~v~~~d~r----G~G~S~~~~~~~~~~~~ 168 (330)
-+.+..+.+....... .|++|++||..-...+ .+ .......+..+..-|+.+++| |+.... ......+.++
T Consensus 96 CLylNV~tp~~~~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~-d~~~~gN~gl 173 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTG-DSAAPGNLGL 173 (545)
T ss_pred CceEEEeccCCCccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecC-CCCCCCcccH
Confidence 4556666555311111 7999999997521111 11 122223344456778889998 332222 1111122232
Q ss_pred HHHHHHHHHHHHHh---CC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 169 LGDMQEVVAHVGSK---YP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 169 ~~D~~~~i~~l~~~---~~--~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
.|...+++|+++. ++ ..+|.++|||.||..+..+......+..+..+|..++.
T Consensus 174 -~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 174 -FDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred -HHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 4899999999875 22 34899999999998886655432222235555555554
No 204
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.00 E-value=0.058 Score=45.81 Aligned_cols=80 Identities=18% Similarity=0.356 Sum_probs=48.6
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEE-EEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRV-VVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v-~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
++..||+..|++.+.. . +.++. ...++++ +++|||-.-- |. + + .. ...|.+
T Consensus 10 ~~~LilfF~GWg~d~~-~-f~hL~---~~~~~D~l~~yDYr~l~~---------------d~----~-~-~~--y~~i~l 61 (213)
T PF04301_consen 10 GKELILFFAGWGMDPS-P-FSHLI---LPENYDVLICYDYRDLDF---------------DF----D-L-SG--YREIYL 61 (213)
T ss_pred CCeEEEEEecCCCChH-H-hhhcc---CCCCccEEEEecCccccc---------------cc----c-c-cc--CceEEE
Confidence 4567888899854322 1 23331 2456665 5688874211 10 1 1 12 238999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
|++|||-.+|..++...+ ++.++++++..
T Consensus 62 vAWSmGVw~A~~~l~~~~----~~~aiAINGT~ 90 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGIP----FKRAIAINGTP 90 (213)
T ss_pred EEEeHHHHHHHHHhccCC----cceeEEEECCC
Confidence 999999999988776543 66777776543
No 205
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=95.97 E-value=0.017 Score=50.50 Aligned_cols=54 Identities=20% Similarity=0.279 Sum_probs=43.8
Q ss_pred ChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 167 SFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
.+..+..+++..+++.||..+|.+.|||+||.+|..+...++- .+|+..+|-|.
T Consensus 257 ryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl-----P~VaFesPGd~ 310 (425)
T KOG4540|consen 257 RYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL-----PVVAFESPGDA 310 (425)
T ss_pred chhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC-----ceEEecCchhh
Confidence 4556788888889999999999999999999999888777763 45666666654
No 206
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=95.97 E-value=0.017 Score=50.50 Aligned_cols=54 Identities=20% Similarity=0.279 Sum_probs=43.8
Q ss_pred ChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCCh
Q 020156 167 SFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~ 225 (330)
.+..+..+++..+++.||..+|.+.|||+||.+|..+...++- .+|+..+|-|.
T Consensus 257 ryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl-----P~VaFesPGd~ 310 (425)
T COG5153 257 RYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL-----PVVAFESPGDA 310 (425)
T ss_pred chhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC-----ceEEecCchhh
Confidence 4556788888889999999999999999999999888777763 45666666654
No 207
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=95.72 E-value=0.044 Score=45.84 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=27.3
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEc
Q 020156 184 PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLC 220 (330)
Q Consensus 184 ~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~ 220 (330)
+..+|.+-|+|+||.+++..+..++.. +.+.+..+
T Consensus 91 ~~~rI~igGfs~G~a~aL~~~~~~~~~--l~G~~~~s 125 (206)
T KOG2112|consen 91 PSNRIGIGGFSQGGALALYSALTYPKA--LGGIFALS 125 (206)
T ss_pred CccceeEcccCchHHHHHHHHhccccc--cceeeccc
Confidence 345899999999999999999988765 55555443
No 208
>PLN02934 triacylglycerol lipase
Probab=95.71 E-value=0.035 Score=52.76 Aligned_cols=36 Identities=17% Similarity=0.216 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHh
Q 020156 170 GDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLG 205 (330)
Q Consensus 170 ~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~ 205 (330)
..+...++.+.+++|+.++++.|||+||.+|..++.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 357777888888899999999999999999998874
No 209
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.65 E-value=0.023 Score=52.20 Aligned_cols=90 Identities=17% Similarity=0.205 Sum_probs=49.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhC--CcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSK--GWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLY 189 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~--g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~ 189 (330)
+.-.||+.||+.| ....|+...+....+. +..++....+|.-.....-...-..+..+++.+.+.+... .+|.
T Consensus 79 ~~HLvVlthGi~~-~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si----~kIS 153 (405)
T KOG4372|consen 79 PKHLVVLTHGLHG-ADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSI----EKIS 153 (405)
T ss_pred CceEEEecccccc-ccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhcccc----ceee
Confidence 4567999999988 3345556666666544 3333444443221111111111122334444443333332 3899
Q ss_pred EEEEcHHHHHHHHHHhh
Q 020156 190 AVGWSLGANILIRYLGH 206 (330)
Q Consensus 190 lvG~SlGg~ia~~~a~~ 206 (330)
.+|||+||.++..+.+.
T Consensus 154 fvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 154 FVGHSLGGLVARYAIGY 170 (405)
T ss_pred eeeeecCCeeeeEEEEe
Confidence 99999999988755443
No 210
>PLN02571 triacylglycerol lipase
Probab=95.63 E-value=0.023 Score=52.87 Aligned_cols=40 Identities=20% Similarity=0.175 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHhCCCC--cEEEEEEcHHHHHHHHHHhhc
Q 020156 168 FLGDMQEVVAHVGSKYPKA--HLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 168 ~~~D~~~~i~~l~~~~~~~--~i~lvG~SlGg~ia~~~a~~~ 207 (330)
..+++.+.|+.+.++|++. +|.+.||||||.+|+..|.+.
T Consensus 206 ar~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 206 ARDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 3456777777777777654 799999999999999988653
No 211
>PLN02408 phospholipase A1
Probab=95.59 E-value=0.027 Score=51.74 Aligned_cols=55 Identities=22% Similarity=0.284 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHHHhCCCC--cEEEEEEcHHHHHHHHHHhhcCCC---CCcceEEEEcCC
Q 020156 168 FLGDMQEVVAHVGSKYPKA--HLYAVGWSLGANILIRYLGHESHS---CPLSGAVSLCNP 222 (330)
Q Consensus 168 ~~~D~~~~i~~l~~~~~~~--~i~lvG~SlGg~ia~~~a~~~~~~---~~i~~~v~~~~p 222 (330)
..+++.+.|+.+.++|++. +|.+.||||||.+|+.+|...... .+...++..++|
T Consensus 180 ~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsP 239 (365)
T PLN02408 180 LQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGP 239 (365)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCC
Confidence 3456777777788888764 599999999999999988765432 112345555555
No 212
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.53 E-value=0.094 Score=49.68 Aligned_cols=98 Identities=18% Similarity=0.185 Sum_probs=67.3
Q ss_pred CCCCCcEEEEeCCCCCCCchHHHHHHHHHH----HhCC---------------cEEEEEc-CCCCCCCCC--CCCCccCc
Q 020156 109 LPPDSPVLILMPGLTGGSEDSYVRHMLLRA----RSKG---------------WRVVVFN-SRGCGDSPV--TTPQFYSA 166 (330)
Q Consensus 109 ~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~----~~~g---------------~~v~~~d-~rG~G~S~~--~~~~~~~~ 166 (330)
.+.++|+++.+.|.+|++.. ..+.-++ ...| -+++.+| .-|.|.|.. ........
T Consensus 97 dp~~rPvi~wlNGGPGcSS~---~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~ 173 (498)
T COG2939 97 DPANRPVIFWLNGGPGCSSV---TGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFE 173 (498)
T ss_pred CCCCCceEEEecCCCChHhh---hhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchh
Confidence 45579999999999998763 2221111 0111 2688899 669998873 33344445
Q ss_pred ChHHHHHHHHHHHHHhCC-----CCcEEEEEEcHHHHHHHHHHhhcCC
Q 020156 167 SFLGDMQEVVAHVGSKYP-----KAHLYAVGWSLGANILIRYLGHESH 209 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~~~-----~~~i~lvG~SlGg~ia~~~a~~~~~ 209 (330)
...+|+..+.+.+...++ .++.+++|-|+||.-+..+|.+.-+
T Consensus 174 ~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~ 221 (498)
T COG2939 174 GAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLE 221 (498)
T ss_pred ccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHH
Confidence 667898888888776543 2389999999999988888765443
No 213
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=95.30 E-value=0.052 Score=47.95 Aligned_cols=94 Identities=22% Similarity=0.257 Sum_probs=52.9
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC----------CCCCCCCCCCCCccCcChHHHHHHHHHH---
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS----------RGCGDSPVTTPQFYSASFLGDMQEVVAH--- 178 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~----------rG~G~S~~~~~~~~~~~~~~D~~~~i~~--- 178 (330)
..|.+++.||+.+..... ......+...++.++..+. +|++.+......+.......+...++..
T Consensus 48 ~~p~v~~~h~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQS--LGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYR 125 (299)
T ss_pred cCceEEeccCccccccCc--chHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHH
Confidence 578899999998766542 2256677788888777765 3332222111111111111111111111
Q ss_pred HHHhCCCCcEEEEEEcHHHHHHHHHHhhcC
Q 020156 179 VGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 179 l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
.... ...+....|+++|+..+..++...+
T Consensus 126 ~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 126 LLGA-SLGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HHhh-hcCcceEEEEEeeccchHHHhhcch
Confidence 1111 1238899999999999999888776
No 214
>PLN02324 triacylglycerol lipase
Probab=95.24 E-value=0.04 Score=51.32 Aligned_cols=41 Identities=20% Similarity=0.156 Sum_probs=32.5
Q ss_pred ChHHHHHHHHHHHHHhCCCC--cEEEEEEcHHHHHHHHHHhhc
Q 020156 167 SFLGDMQEVVAHVGSKYPKA--HLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~~~~~--~i~lvG~SlGg~ia~~~a~~~ 207 (330)
...+.+.+.|+.+..+|++. +|.+.||||||.+|+..|...
T Consensus 194 SareqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 194 SAQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 34566777777888888764 699999999999999988653
No 215
>PLN02719 triacylglycerol lipase
Probab=94.94 E-value=0.053 Score=51.64 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHHHhCCC-----CcEEEEEEcHHHHHHHHHHhhc
Q 020156 168 FLGDMQEVVAHVGSKYPK-----AHLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 168 ~~~D~~~~i~~l~~~~~~-----~~i~lvG~SlGg~ia~~~a~~~ 207 (330)
..+++.+.|+.+.++|++ .+|.+.||||||.+|+..|...
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 456677778888887764 3899999999999999988544
No 216
>PLN02310 triacylglycerol lipase
Probab=94.52 E-value=0.074 Score=49.48 Aligned_cols=54 Identities=17% Similarity=0.192 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHhCC----CCcEEEEEEcHHHHHHHHHHhhcCC---CCCcceEEEEcCCC
Q 020156 169 LGDMQEVVAHVGSKYP----KAHLYAVGWSLGANILIRYLGHESH---SCPLSGAVSLCNPF 223 (330)
Q Consensus 169 ~~D~~~~i~~l~~~~~----~~~i~lvG~SlGg~ia~~~a~~~~~---~~~i~~~v~~~~p~ 223 (330)
.+.+.+.|+.+...|+ ..+|.++||||||.+|+..|.+... ..++ .++..++|-
T Consensus 188 ~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v-~vyTFGsPR 248 (405)
T PLN02310 188 SEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFV-SVISFGAPR 248 (405)
T ss_pred HHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcce-eEEEecCCC
Confidence 3456666666665553 3489999999999999988854321 1113 466666663
No 217
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=94.37 E-value=0.16 Score=48.86 Aligned_cols=102 Identities=13% Similarity=0.084 Sum_probs=63.1
Q ss_pred CCCcEEEEeCCCC-----CCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHh---
Q 020156 111 PDSPVLILMPGLT-----GGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK--- 182 (330)
Q Consensus 111 ~~~p~vv~~HG~~-----g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~--- 182 (330)
..+-.|+-+||.+ +-+++.|++.++.. .|+-++.+||-=- |......-.+.+--+.-|+...
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~a---L~cPiiSVdYSLA-------PEaPFPRaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQA---LGCPIISVDYSLA-------PEAPFPRALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHH---hCCCeEEeeeccC-------CCCCCCcHHHHHHHHHHHHhcCHHH
Confidence 3556789999975 34567787777544 4899999999421 2222334456666666665432
Q ss_pred --CCCCcEEEEEEcHHHHHHHHHH---hhcCCCCCcceEEEEcCCC
Q 020156 183 --YPKAHLYAVGWSLGANILIRYL---GHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 183 --~~~~~i~lvG~SlGg~ia~~~a---~~~~~~~~i~~~v~~~~p~ 223 (330)
.-..+|+++|-|.||++.+-.+ .+++-+ --+++++.-+|+
T Consensus 464 lG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvR-vPDGl~laY~pt 508 (880)
T KOG4388|consen 464 LGSTGERIVLAGDSAGGNLCFTVALRAIAYGVR-VPDGLMLAYPPT 508 (880)
T ss_pred hCcccceEEEeccCCCcceeehhHHHHHHhCCC-CCCceEEecChh
Confidence 1245999999999999765443 233333 134555554553
No 218
>PLN02847 triacylglycerol lipase
Probab=94.36 E-value=0.12 Score=50.23 Aligned_cols=36 Identities=19% Similarity=0.163 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh
Q 020156 171 DMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 171 D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~ 206 (330)
++...+..+..++|+-+++++||||||.+|..++..
T Consensus 236 ~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 236 LSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 334444555667888899999999999999987754
No 219
>PLN02761 lipase class 3 family protein
Probab=94.36 E-value=0.09 Score=50.21 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHHHHhCC------CCcEEEEEEcHHHHHHHHHHhh
Q 020156 168 FLGDMQEVVAHVGSKYP------KAHLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 168 ~~~D~~~~i~~l~~~~~------~~~i~lvG~SlGg~ia~~~a~~ 206 (330)
..+++.+.|+.+...|+ ..+|.+.||||||.+|+..|.+
T Consensus 270 aR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 270 AREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 44667777787877773 2379999999999999988854
No 220
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.30 E-value=0.074 Score=48.81 Aligned_cols=59 Identities=14% Similarity=0.232 Sum_probs=42.6
Q ss_pred cCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC----CCcceEEEEcCC
Q 020156 164 YSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS----CPLSGAVSLCNP 222 (330)
Q Consensus 164 ~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~----~~i~~~v~~~~p 222 (330)
+...|...+.+.++.|...+|+-+|.+.||||||.+|...|..--.. +.-..++..+.|
T Consensus 149 ~~~~~~~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~P 211 (336)
T KOG4569|consen 149 YTSLWNSGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQP 211 (336)
T ss_pred hccccHHHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCC
Confidence 33445578888888888888988999999999999999887543221 113456666665
No 221
>PLN02802 triacylglycerol lipase
Probab=94.29 E-value=0.071 Score=50.76 Aligned_cols=39 Identities=21% Similarity=0.245 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhCCCC--cEEEEEEcHHHHHHHHHHhhcC
Q 020156 170 GDMQEVVAHVGSKYPKA--HLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 170 ~D~~~~i~~l~~~~~~~--~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
+++.+.|+.+.++|++. +|.+.||||||.+|+..|...-
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~ 352 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELA 352 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHH
Confidence 46666777777777653 7999999999999998886553
No 222
>PLN02753 triacylglycerol lipase
Probab=94.27 E-value=0.09 Score=50.26 Aligned_cols=39 Identities=15% Similarity=0.086 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHHHhCCC-----CcEEEEEEcHHHHHHHHHHhh
Q 020156 168 FLGDMQEVVAHVGSKYPK-----AHLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 168 ~~~D~~~~i~~l~~~~~~-----~~i~lvG~SlGg~ia~~~a~~ 206 (330)
..+++.+.|+.+..+|+. .+|.+.||||||.+|+..|..
T Consensus 289 ~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 289 AREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 346677777777777753 489999999999999988854
No 223
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.96 E-value=0.14 Score=44.48 Aligned_cols=108 Identities=11% Similarity=0.139 Sum_probs=63.1
Q ss_pred CEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHH--HHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHH
Q 020156 95 GSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRH--MLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDM 172 (330)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~--~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~ 172 (330)
++-...|..|++ ..+.-|.+-|.+.++ |.+. +...+.++|...+++.-+-+|.......-...-..+.|+
T Consensus 100 ~~A~~~~liPQK-----~~~KOG~~a~tgdh~---y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDl 171 (371)
T KOG1551|consen 100 RTARVAWLIPQK-----MADLCLSWALTGDHV---YTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDL 171 (371)
T ss_pred cceeeeeecccC-----cCCeeEEEeecCCce---eEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHH
Confidence 344556666653 445555555543222 2343 466788899999999999998764332111111122232
Q ss_pred ----HHHHHHHHH------hCCCCcEEEEEEcHHHHHHHHHHhhcCCC
Q 020156 173 ----QEVVAHVGS------KYPKAHLYAVGWSLGANILIRYLGHESHS 210 (330)
Q Consensus 173 ----~~~i~~l~~------~~~~~~i~lvG~SlGg~ia~~~a~~~~~~ 210 (330)
++.|+.... ..+-.++.++|-||||.+|......++..
T Consensus 172 f~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~P 219 (371)
T KOG1551|consen 172 FKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKP 219 (371)
T ss_pred HHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCC
Confidence 122222222 12344899999999999999888877654
No 224
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=93.40 E-value=0.25 Score=45.66 Aligned_cols=35 Identities=9% Similarity=-0.053 Sum_probs=28.2
Q ss_pred CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 185 KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 185 ~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
-.++++.|.|==|..+...|+.. .+ |++++-++-.
T Consensus 171 i~~FvV~GaSKRGWTtWltaa~D-~R--V~aivP~Vid 205 (367)
T PF10142_consen 171 IEKFVVTGASKRGWTTWLTAAVD-PR--VKAIVPIVID 205 (367)
T ss_pred ccEEEEeCCchHhHHHHHhhccC-cc--eeEEeeEEEc
Confidence 34899999999999999888855 44 8888877654
No 225
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.16 E-value=0.11 Score=49.58 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhCC----CCcEEEEEEcHHHHHHHHHHhhc
Q 020156 170 GDMQEVVAHVGSKYP----KAHLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 170 ~D~~~~i~~l~~~~~----~~~i~lvG~SlGg~ia~~~a~~~ 207 (330)
+.+.+.|+.+.+.|+ ..+|.+.||||||.+|+..|.+.
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHH
Confidence 344455555555553 33799999999999999888553
No 226
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=92.65 E-value=0.44 Score=43.41 Aligned_cols=63 Identities=24% Similarity=0.256 Sum_probs=45.0
Q ss_pred EEEEEcCC-CCCCCCCCCCCccC--cChHHHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhh
Q 020156 144 RVVVFNSR-GCGDSPVTTPQFYS--ASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 144 ~v~~~d~r-G~G~S~~~~~~~~~--~~~~~D~~~~i~~l~~~~~---~~~i~lvG~SlGg~ia~~~a~~ 206 (330)
+++.+|.| |.|-|-...+.... ...++|+..+++..-+++| +.++++.|-|.||..+-.+|.+
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~ 71 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 71 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHH
Confidence 68889988 89988544332222 2344788877776666665 5699999999999987777654
No 227
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.41 E-value=0.47 Score=38.54 Aligned_cols=51 Identities=16% Similarity=0.225 Sum_probs=40.9
Q ss_pred HHHHHHHHHh-CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChH
Q 020156 173 QEVVAHVGSK-YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 173 ~~~i~~l~~~-~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~ 226 (330)
++.-.|+.++ .|. +..+-|.||||..++++.-++|+. ..++|++++.+|..
T Consensus 88 ~AyerYv~eEalpg-s~~~sgcsmGayhA~nfvfrhP~l--ftkvialSGvYdar 139 (227)
T COG4947 88 RAYERYVIEEALPG-STIVSGCSMGAYHAANFVFRHPHL--FTKVIALSGVYDAR 139 (227)
T ss_pred HHHHHHHHHhhcCC-CccccccchhhhhhhhhheeChhH--hhhheeecceeeHH
Confidence 3444566554 343 578899999999999999999998 99999999988753
No 228
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=90.87 E-value=2 Score=36.94 Aligned_cols=83 Identities=16% Similarity=0.082 Sum_probs=46.7
Q ss_pred CcEEEEEcCCCC-CCCCCCCCCccC-cChHHHHHHHHHHHHHhC-CCCcEEEEEEcHHHHHHHHHHhhcCCC----CCcc
Q 020156 142 GWRVVVFNSRGC-GDSPVTTPQFYS-ASFLGDMQEVVAHVGSKY-PKAHLYAVGWSLGANILIRYLGHESHS----CPLS 214 (330)
Q Consensus 142 g~~v~~~d~rG~-G~S~~~~~~~~~-~~~~~D~~~~i~~l~~~~-~~~~i~lvG~SlGg~ia~~~a~~~~~~----~~i~ 214 (330)
|+.+..++++.. +--.. ....+. ....+-+..+.+.+.... ...+++++|+|.|+.++...+.+.-+. ....
T Consensus 2 ~~~~~~V~YPa~f~P~~g-~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l 80 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTG-IGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDL 80 (225)
T ss_pred CcceEEecCCchhcCcCC-CCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCce
Confidence 678888888862 11000 011111 222222333333344322 455899999999999999887655331 1244
Q ss_pred eEEEEcCCCCh
Q 020156 215 GAVSLCNPFNL 225 (330)
Q Consensus 215 ~~v~~~~p~d~ 225 (330)
..|++++|...
T Consensus 81 ~fVl~gnP~rp 91 (225)
T PF08237_consen 81 SFVLIGNPRRP 91 (225)
T ss_pred EEEEecCCCCC
Confidence 68888888543
No 229
>PF03283 PAE: Pectinacetylesterase
Probab=90.44 E-value=0.96 Score=41.91 Aligned_cols=36 Identities=19% Similarity=0.173 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHh-CCC-CcEEEEEEcHHHHHHHHHHh
Q 020156 170 GDMQEVVAHVGSK-YPK-AHLYAVGWSLGANILIRYLG 205 (330)
Q Consensus 170 ~D~~~~i~~l~~~-~~~-~~i~lvG~SlGg~ia~~~a~ 205 (330)
.-+++++++|..+ .++ .++++.|.|.||.-++..+-
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 5688899999887 543 38999999999998887553
No 230
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=89.63 E-value=0.99 Score=41.36 Aligned_cols=44 Identities=20% Similarity=0.175 Sum_probs=34.2
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHhhcCCC---CCcceEEEEcCCCChH
Q 020156 183 YPKAHLYAVGWSLGANILIRYLGHESHS---CPLSGAVSLCNPFNLV 226 (330)
Q Consensus 183 ~~~~~i~lvG~SlGg~ia~~~a~~~~~~---~~i~~~v~~~~p~d~~ 226 (330)
.+++|+.++|||+|+-+....+.+-.++ ..|+.+++++.|....
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 3667999999999999988776555443 3478899999987654
No 231
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=89.58 E-value=3.3 Score=34.10 Aligned_cols=39 Identities=18% Similarity=0.409 Sum_probs=33.6
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
.+|.+|++-|+.|+..+.-...+...|.++|+++++.|-
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 578899999999987776666777888999999999985
No 232
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=89.24 E-value=3.4 Score=37.16 Aligned_cols=98 Identities=16% Similarity=0.257 Sum_probs=63.2
Q ss_pred CCCcEEEEeCCCCCCCch---HHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCC------------C-CccCcChHHHHH
Q 020156 111 PDSPVLILMPGLTGGSED---SYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTT------------P-QFYSASFLGDMQ 173 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~---~~~~~~~~~~~~-~g~~v~~~d~rG~G~S~~~~------------~-~~~~~~~~~D~~ 173 (330)
+.+..|+++-|....-.. ..+-.+...+.. .+-+++++--.|.|.-.... . .++..+..+.++
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 356667777776421111 123344444433 57788888778887542210 0 122234567888
Q ss_pred HHHHHHHHhC-CCCcEEEEEEcHHHHHHHHHHhhcC
Q 020156 174 EVVAHVGSKY-PKAHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 174 ~~i~~l~~~~-~~~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
.+..+|...| |...|+++|+|-|+.++-.+|+...
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagmir 144 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGMIR 144 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHHHH
Confidence 8888888877 6779999999999999998887643
No 233
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=87.94 E-value=1.9 Score=41.63 Aligned_cols=89 Identities=15% Similarity=0.109 Sum_probs=59.8
Q ss_pred HHHHhCCcEEEEEcCCCCCCCCCC--CCCccCc--------ChHHHHHHHHHHHHHhC---CCCcEEEEEEcHHHHHHHH
Q 020156 136 LRARSKGWRVVVFNSRGCGDSPVT--TPQFYSA--------SFLGDMQEVVAHVGSKY---PKAHLYAVGWSLGANILIR 202 (330)
Q Consensus 136 ~~~~~~g~~v~~~d~rG~G~S~~~--~~~~~~~--------~~~~D~~~~i~~l~~~~---~~~~i~lvG~SlGg~ia~~ 202 (330)
...+++||.++.=|- ||..+... .....+. .-..+...+-+.|.+.| +...-+..|.|-||--++.
T Consensus 53 ~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 53 ATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred chhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 456789999999997 55544321 1111111 11234444444444443 2336899999999999999
Q ss_pred HHhhcCCCCCcceEEEEcCCCChHh
Q 020156 203 YLGHESHSCPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 203 ~a~~~~~~~~i~~~v~~~~p~d~~~ 227 (330)
.|.++|+. .+++++-+|.++...
T Consensus 132 ~AQryP~d--fDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 132 AAQRYPED--FDGILAGAPAINWTH 154 (474)
T ss_pred HHHhChhh--cCeEEeCCchHHHHH
Confidence 99999998 999999998877544
No 234
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=87.31 E-value=4.1 Score=36.26 Aligned_cols=95 Identities=15% Similarity=0.295 Sum_probs=57.4
Q ss_pred cEEEEeCCCCCCCch----HHHHHHHHHH-HhCCcEEEEEcCCCCCCC--------CCCC----CCccCcChHHHHHHHH
Q 020156 114 PVLILMPGLTGGSED----SYVRHMLLRA-RSKGWRVVVFNSRGCGDS--------PVTT----PQFYSASFLGDMQEVV 176 (330)
Q Consensus 114 p~vv~~HG~~g~~~~----~~~~~~~~~~-~~~g~~v~~~d~rG~G~S--------~~~~----~~~~~~~~~~D~~~~i 176 (330)
.+||++=|...+... ..+..+...+ ...+-..+++=.+|.|.. .... ......+..+.+..+.
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 456666666533221 2244555445 223335555666777761 1111 1122235567888888
Q ss_pred HHHHHhC-CCCcEEEEEEcHHHHHHHHHHhhcC
Q 020156 177 AHVGSKY-PKAHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 177 ~~l~~~~-~~~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
.++.+.| +..+|.++|+|-|+.+|-.++..-.
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i~ 114 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMID 114 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHHh
Confidence 8887766 4568999999999999998887653
No 235
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=85.72 E-value=4.6 Score=42.74 Aligned_cols=97 Identities=12% Similarity=0.180 Sum_probs=60.9
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCC-CCCCCCccCcChHHHH-HHHHHHHHHhCCCCcE
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS-PVTTPQFYSASFLGDM-QEVVAHVGSKYPKAHL 188 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S-~~~~~~~~~~~~~~D~-~~~i~~l~~~~~~~~i 188 (330)
+..|++.++|.+.|.... +..++..+ ..|.+|.- ....|. +-.+++ ...|+.+++-.|..|.
T Consensus 2121 se~~~~Ffv~pIEG~tt~--l~~la~rl----------e~PaYglQ~T~~vP~----dSies~A~~yirqirkvQP~GPY 2184 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTA--LESLASRL----------EIPAYGLQCTEAVPL----DSIESLAAYYIRQIRKVQPEGPY 2184 (2376)
T ss_pred ccCCceEEEeccccchHH--HHHHHhhc----------CCcchhhhccccCCc----chHHHHHHHHHHHHHhcCCCCCe
Confidence 367889999998764332 33443322 23333321 111111 223443 3467778887788899
Q ss_pred EEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 189 YAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 189 ~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
-++|+|+|+.++..+|....+......++++....
T Consensus 2185 rl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2185 RLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred eeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 99999999999999987766554456677776543
No 236
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=84.86 E-value=1.8 Score=33.48 Aligned_cols=32 Identities=22% Similarity=0.491 Sum_probs=23.3
Q ss_pred CCCcEEEEeCCCCCCCchHHHHH-HHHHHHhCCc
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRH-MLLRARSKGW 143 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~-~~~~~~~~g~ 143 (330)
+.+|.|+-+||++|... .|+.. +++.+.+.|.
T Consensus 50 p~KpLVlSfHG~tGtGK-n~v~~liA~~ly~~G~ 82 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGK-NFVSRLIAEHLYKSGM 82 (127)
T ss_pred CCCCEEEEeecCCCCcH-HHHHHHHHHHHHhccc
Confidence 37899999999999776 44444 4566677663
No 237
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=84.50 E-value=4.9 Score=38.32 Aligned_cols=112 Identities=15% Similarity=0.199 Sum_probs=64.2
Q ss_pred CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEE-EEEcCCCCCCCCCCCCCccCcChHHHH
Q 020156 94 DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRV-VVFNSRGCGDSPVTTPQFYSASFLGDM 172 (330)
Q Consensus 94 g~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v-~~~d~rG~G~S~~~~~~~~~~~~~~D~ 172 (330)
+.++.+.+.+++- +.|..|+.-|+-. .+.+ .. ...+.+.|.-. +.-|.|=-|++=- ...+.+.+-+
T Consensus 275 reEi~yYFnPGD~-----KPPL~VYFSGyR~--aEGF-Eg-y~MMk~Lg~PfLL~~DpRleGGaFY----lGs~eyE~~I 341 (511)
T TIGR03712 275 RQEFIYYFNPGDF-----KPPLNVYFSGYRP--AEGF-EG-YFMMKRLGAPFLLIGDPRLEGGAFY----LGSDEYEQGI 341 (511)
T ss_pred CCeeEEecCCcCC-----CCCeEEeeccCcc--cCcc-hh-HHHHHhcCCCeEEeeccccccceee----eCcHHHHHHH
Confidence 4455544444432 4566789988854 2222 11 11244456554 4457775555411 1112344455
Q ss_pred HHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCC
Q 020156 173 QEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 173 ~~~i~~l~~~~--~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~ 223 (330)
..+|+...+.. ....+++.|.|||..=|+.|++.... .+|+|+-|.
T Consensus 342 ~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P-----~AIiVgKPL 389 (511)
T TIGR03712 342 INVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSP-----HAIIVGKPL 389 (511)
T ss_pred HHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCC-----ceEEEcCcc
Confidence 55555443332 34489999999999999999988764 467777664
No 238
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=81.13 E-value=3.3 Score=31.39 Aligned_cols=32 Identities=19% Similarity=0.341 Sum_probs=16.6
Q ss_pred CCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCch
Q 020156 93 DDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSED 128 (330)
Q Consensus 93 dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~ 128 (330)
||..+..-...+. .++..+||++||++|+--+
T Consensus 76 ~g~~iHFih~rs~----~~~aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 76 DGLDIHFIHVRSK----RPNAIPLLLLHGWPGSFLE 107 (112)
T ss_dssp TTEEEEEEEE--S-----TT-EEEEEE--SS--GGG
T ss_pred eeEEEEEEEeeCC----CCCCeEEEEECCCCccHHh
Confidence 5766666555543 2366789999999997654
No 239
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=80.96 E-value=4.4 Score=32.69 Aligned_cols=39 Identities=21% Similarity=0.434 Sum_probs=32.1
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r 151 (330)
+|.+|++-|+.|+..+...+.+...|.+.|+.++.+|-.
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 478999999999888777778888899999999999863
No 240
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=73.24 E-value=19 Score=30.50 Aligned_cols=55 Identities=16% Similarity=0.203 Sum_probs=37.4
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCc-EEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHh
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGW-RVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK 182 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~-~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~ 182 (330)
.+.-+|+++||....+...| .-+-..+.++|| .|++...-|+ -++..+++++++.
T Consensus 136 k~e~~vlmgHGt~h~s~~~Y-acLd~~~~~~~f~~v~v~~ve~y----------------P~~d~vi~~l~~~ 191 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAY-ACLDHVLDEYGFDNVFVAAVEGY----------------PLVDTVIEYLRKN 191 (265)
T ss_pred cCeEEEEEecCCCccHHHHH-HHHHHHHHhcCCCceEEEEecCC----------------CcHHHHHHHHHHc
Confidence 45678999999876666544 445455678899 7777766544 2345678888775
No 241
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=72.79 E-value=28 Score=30.96 Aligned_cols=39 Identities=23% Similarity=0.436 Sum_probs=34.6
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
.+|++|++=|+.|+....|++++..++.+++...+++|+
T Consensus 17 ~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNL 55 (366)
T KOG1532|consen 17 QRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINL 55 (366)
T ss_pred cCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeC
Confidence 678899999999999999999999999998887777776
No 242
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=72.58 E-value=22 Score=32.26 Aligned_cols=97 Identities=16% Similarity=0.256 Sum_probs=61.0
Q ss_pred CCCCcEEEEeCCCCCCCchHHHHHHHH--HHH----h------CCcEEEEEcCC-CCCCCCCCCCCccCc---ChHHHHH
Q 020156 110 PPDSPVLILMPGLTGGSEDSYVRHMLL--RAR----S------KGWRVVVFNSR-GCGDSPVTTPQFYSA---SFLGDMQ 173 (330)
Q Consensus 110 ~~~~p~vv~~HG~~g~~~~~~~~~~~~--~~~----~------~g~~v~~~d~r-G~G~S~~~~~~~~~~---~~~~D~~ 173 (330)
...+|..+.+-|..|.|...| -.+.+ .+. . +--+++.+|.| |.|.|-......|.. ..+.|+.
T Consensus 28 ks~~pl~lwlqGgpGaSstG~-GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~ 106 (414)
T KOG1283|consen 28 KSERPLALWLQGGPGASSTGF-GNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLV 106 (414)
T ss_pred ccCCCeeEEecCCCCCCCcCc-cchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCcccccccHHHHHHHHH
Confidence 356888999999998877544 22211 000 0 11356666665 888774433333332 3456777
Q ss_pred HHHHHHHHh---CCCCcEEEEEEcHHHHHHHHHHhhc
Q 020156 174 EVVAHVGSK---YPKAHLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 174 ~~i~~l~~~---~~~~~i~lvG~SlGg~ia~~~a~~~ 207 (330)
+.++.+-.. +...|++++.-|+||-++..++.+.
T Consensus 107 ~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l 143 (414)
T KOG1283|consen 107 ELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALEL 143 (414)
T ss_pred HHHHHHHhcCccccccceEEEEhhcccchhhhhhhhH
Confidence 777665444 3466999999999999998876544
No 243
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=71.78 E-value=27 Score=28.03 Aligned_cols=76 Identities=16% Similarity=0.293 Sum_probs=49.4
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEE
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 193 (330)
..-++-.|..|.........+...+.....+++++.. |. .+... ......+.++++.+++.++..+|..++++++.
T Consensus 23 ~~~v~n~g~~G~t~~~~~~~~~~~~~~~~pd~v~i~~-G~--ND~~~-~~~~~~~~~~~~~l~~~~~~~~p~~~vi~~~~ 98 (174)
T cd01841 23 GKTVNNLGIAGISSRQYLEHIEPQLIQKNPSKVFLFL-GT--NDIGK-EVSSNQFIKWYRDIIEQIREEFPNTKIYLLSV 98 (174)
T ss_pred CCeEEecccccccHHHHHHHHHHHHHhcCCCEEEEEe-cc--ccCCC-CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEee
Confidence 4456778888876655555554566666777776653 22 22211 12345678899999999998877777777763
No 244
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=71.55 E-value=8.3 Score=37.01 Aligned_cols=45 Identities=18% Similarity=0.253 Sum_probs=33.5
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHh---hcCCCCCcceEEEEcCCCChHh
Q 020156 183 YPKAHLYAVGWSLGANILIRYLG---HESHSCPLSGAVSLCNPFNLVI 227 (330)
Q Consensus 183 ~~~~~i~lvG~SlGg~ia~~~a~---~~~~~~~i~~~v~~~~p~d~~~ 227 (330)
.+++||.++|||+|+-+....+. +..+-..|..++++++|.....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCH
Confidence 46789999999999999876554 3333345888999999975543
No 245
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=70.82 E-value=38 Score=30.16 Aligned_cols=87 Identities=18% Similarity=0.120 Sum_probs=48.8
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccC---cChHHHHHHHHHHHHHh---CC---CCcEEEEEEcHHHHHHHHH
Q 020156 133 HMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYS---ASFLGDMQEVVAHVGSK---YP---KAHLYAVGWSLGANILIRY 203 (330)
Q Consensus 133 ~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~---~~~~~D~~~~i~~l~~~---~~---~~~i~lvG~SlGg~ia~~~ 203 (330)
.-.+.+..-...++++-| |..++...+. +.-.+-.+++++.+... .| ..++++.|.|||++-+...
T Consensus 52 ~a~E~l~~GD~A~va~QY-----SylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~a 126 (289)
T PF10081_consen 52 DALEYLYGGDVAIVAMQY-----SYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAA 126 (289)
T ss_pred hHHHHHhCCCeEEEEecc-----ccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhh
Confidence 334555555567777766 3333322111 12223344455555432 23 2379999999999877654
Q ss_pred HhhcCCC-CCcceEEEEcCCCC
Q 020156 204 LGHESHS-CPLSGAVSLCNPFN 224 (330)
Q Consensus 204 a~~~~~~-~~i~~~v~~~~p~d 224 (330)
.....+. ..+++++.+++|..
T Consensus 127 f~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 127 FDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred hccHHHhhhhcceEEEeCCCCC
Confidence 4332221 23889999988864
No 246
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=70.40 E-value=4.1 Score=39.68 Aligned_cols=54 Identities=15% Similarity=0.222 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHh-C-CCCcEEEEEEcHHHHHHHHHHhh-----cCCC----CCcceEEEEcCCC
Q 020156 170 GDMQEVVAHVGSK-Y-PKAHLYAVGWSLGANILIRYLGH-----ESHS----CPLSGAVSLCNPF 223 (330)
Q Consensus 170 ~D~~~~i~~l~~~-~-~~~~i~lvG~SlGg~ia~~~a~~-----~~~~----~~i~~~v~~~~p~ 223 (330)
.-..++++.+... . .+++|..+||||||..+-..+.+ .|+- ..-.+++.++.|.
T Consensus 508 ~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 508 ARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 3444566666553 2 36699999999999887665533 2321 2356788888874
No 247
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=70.31 E-value=40 Score=30.24 Aligned_cols=108 Identities=10% Similarity=0.137 Sum_probs=66.1
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
..|.|+++-.+.|... ..++..++.++. .-.|++-||----..+.....+..+++.+-+.+++++++. .++++
T Consensus 102 pdPkvLivapmsGH~a-TLLR~TV~alLp-~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp-----~~hv~ 174 (415)
T COG4553 102 PDPKVLIVAPMSGHYA-TLLRGTVEALLP-YHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGP-----DAHVM 174 (415)
T ss_pred CCCeEEEEecccccHH-HHHHHHHHHhcc-ccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCC-----CCcEE
Confidence 3567888888877544 556777777764 4678888886544444444455555666666666666553 35555
Q ss_pred EEcHHH-----HHHHHHHhhcCCCCCcceEEEEcCCCChHhh
Q 020156 192 GWSLGA-----NILIRYLGHESHSCPLSGAVSLCNPFNLVIA 228 (330)
Q Consensus 192 G~SlGg-----~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~~ 228 (330)
+.+.=+ .++++.+...|.. -....++++|.|...+
T Consensus 175 aVCQP~vPvLAAisLM~~~~~p~~--PssMtlmGgPIDaR~n 214 (415)
T COG4553 175 AVCQPTVPVLAAISLMEEDGDPNV--PSSMTLMGGPIDARKN 214 (415)
T ss_pred EEecCCchHHHHHHHHHhcCCCCC--CceeeeecCccccccC
Confidence 555443 3444444444433 5677888888875443
No 248
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=69.36 E-value=6.9 Score=34.51 Aligned_cols=40 Identities=18% Similarity=0.475 Sum_probs=35.2
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r 151 (330)
..|+||++.|+.++.....++.+...+..+|++|.++..+
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 4699999999998888788899999999999999999554
No 249
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=68.59 E-value=7 Score=33.75 Aligned_cols=73 Identities=14% Similarity=0.148 Sum_probs=49.9
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCC-CCcEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYP-KAHLYA 190 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~-~~~i~l 190 (330)
+.|+||++.|+.++.....++.+...+..+|++|.++..|-. .+.-+..+--.....| ...|.+
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt~---------------eE~~~p~lwRfw~~lP~~G~i~I 93 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPSD---------------RERTQWYFQRYVQHLPAAGEIVL 93 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCH---------------HHHcChHHHHHHHhCCCCCeEEE
Confidence 569999999999888878889999999999999999866521 1222233433333344 337777
Q ss_pred EEEcHHHHH
Q 020156 191 VGWSLGANI 199 (330)
Q Consensus 191 vG~SlGg~i 199 (330)
+=-|+=+-+
T Consensus 94 F~rSwY~~~ 102 (230)
T TIGR03707 94 FDRSWYNRA 102 (230)
T ss_pred EeCchhhhH
Confidence 777754443
No 250
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=67.75 E-value=13 Score=29.27 Aligned_cols=44 Identities=16% Similarity=0.430 Sum_probs=32.7
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT 159 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~ 159 (330)
+|.+-|..++..+...+.++..+.++||+|.++=.-++|.....
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d 45 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEID 45 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccC
Confidence 67777887777788889999999999999997766677665543
No 251
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=66.80 E-value=29 Score=28.97 Aligned_cols=79 Identities=19% Similarity=0.372 Sum_probs=44.6
Q ss_pred CCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHh----CCcEEEEEcCCCCCCCCCC-CCCcc---
Q 020156 93 DDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARS----KGWRVVVFNSRGCGDSPVT-TPQFY--- 164 (330)
Q Consensus 93 dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~----~g~~v~~~d~rG~G~S~~~-~~~~~--- 164 (330)
.+..+.++.... | =+++-|-+|+..+.+++.++..+.. ...+++++|..|....... .+...
T Consensus 27 ~~~~v~~dl~~~---------~-h~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~~~~~~~~~~~~ 96 (205)
T PF01580_consen 27 RGDPVVLDLKKN---------P-HLLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAPLADLPHVAAVA 96 (205)
T ss_dssp TS-EEEEEGGGS-----------SEEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGGGTT-TTBSS-S
T ss_pred CCCEEEEEcCCC---------c-eEEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccchhhhhhhhcccc
Confidence 455666655331 2 3455677787787888888888877 6899999999977544322 11211
Q ss_pred CcChHHHHHHHHHHHHH
Q 020156 165 SASFLGDMQEVVAHVGS 181 (330)
Q Consensus 165 ~~~~~~D~~~~i~~l~~ 181 (330)
.....+++..+++++..
T Consensus 97 ~~~~~~~~~~~l~~l~~ 113 (205)
T PF01580_consen 97 VATDPEEILRLLEELVE 113 (205)
T ss_dssp -B-SHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHH
Confidence 23345566666665543
No 252
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=66.10 E-value=20 Score=31.04 Aligned_cols=92 Identities=15% Similarity=0.151 Sum_probs=48.9
Q ss_pred CcEEEEeCCCCC-CCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-C-ccCcChHHHHHH------HHHHHHHhC
Q 020156 113 SPVLILMPGLTG-GSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-Q-FYSASFLGDMQE------VVAHVGSKY 183 (330)
Q Consensus 113 ~p~vv~~HG~~g-~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~-~-~~~~~~~~D~~~------~i~~l~~~~ 183 (330)
+|.|++++--.. ...+.|.......+.+.|+.+..++...--....... - +...+.+--+.+ +.+.+++.+
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~ 110 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAV 110 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHH
Confidence 466888886542 2345677888888888999988887652100000000 0 001111111111 112222222
Q ss_pred CCCcEEEEEEcHHHHHHHHHHh
Q 020156 184 PKAHLYAVGWSLGANILIRYLG 205 (330)
Q Consensus 184 ~~~~i~lvG~SlGg~ia~~~a~ 205 (330)
.+ -..++|.|.|++++.....
T Consensus 111 ~~-G~~~~G~SAGAii~~~~i~ 131 (233)
T PRK05282 111 KN-GTPYIGWSAGANVAGPTIR 131 (233)
T ss_pred HC-CCEEEEECHHHHhhhccce
Confidence 22 3689999999998766544
No 253
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=64.08 E-value=14 Score=34.08 Aligned_cols=45 Identities=7% Similarity=-0.099 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEE
Q 020156 170 GDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGHESHSCPLSGAV 217 (330)
Q Consensus 170 ~D~~~~i~~l~~~~~---~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v 217 (330)
--+..+++....+.. -..+.+.|.|--|..+...|...|. +.+.|
T Consensus 215 ~a~srAMdlAq~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDpr---v~aIv 262 (507)
T COG4287 215 YAVSRAMDLAQDELEQVEIKGFMVTGASKRGWTTWLTAIADPR---VFAIV 262 (507)
T ss_pred HHHHHHHHHHHhhhhheeeeeEEEeccccchHHHHHHHhcCcc---hhhhh
Confidence 344445554444332 2368999999999999988888886 55555
No 254
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=61.69 E-value=11 Score=33.51 Aligned_cols=82 Identities=17% Similarity=0.164 Sum_probs=45.0
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCc-------EEEEEcCCCCCCCCCCCC---C-ccCc--C--hHHHHHHHHHHHH
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGW-------RVVVFNSRGCGDSPVTTP---Q-FYSA--S--FLGDMQEVVAHVG 180 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~-------~v~~~d~rG~G~S~~~~~---~-~~~~--~--~~~D~~~~i~~l~ 180 (330)
-|++.|. |+....-.+.+...+.++|. +++.+|..|.=..+.... + .+.. . ...++.++|+.++
T Consensus 27 ~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v~ 105 (279)
T cd05312 27 RILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAVK 105 (279)
T ss_pred EEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhcC
Confidence 4455665 33333444556666666787 899999998643322110 0 0000 0 1134555555544
Q ss_pred HhCCCCcEEEEEEcH-HHHHHHHHH
Q 020156 181 SKYPKAHLYAVGWSL-GANILIRYL 204 (330)
Q Consensus 181 ~~~~~~~i~lvG~Sl-Gg~ia~~~a 204 (330)
+-+++|-|- ||.+.-...
T Consensus 106 ------ptvlIG~S~~~g~ft~evv 124 (279)
T cd05312 106 ------PTVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred ------CCEEEEeCCCCCCCCHHHH
Confidence 559999995 675555444
No 255
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=60.67 E-value=66 Score=23.77 Aligned_cols=81 Identities=11% Similarity=0.084 Sum_probs=52.0
Q ss_pred HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHH--HHHHHHHhhcCC
Q 020156 132 RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGA--NILIRYLGHESH 209 (330)
Q Consensus 132 ~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg--~ia~~~a~~~~~ 209 (330)
..+.+.+..+||-.=.+.+|..|.+-... ...+..+-=+..|+.+...+|+.+++++|=|--. -+-...+.++|+
T Consensus 14 ~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~---~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGPLLLRDYGPSLSGL---FKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHhcCCCCCceEcccCCcccccc---ccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 45556666778877777777775442211 1111123445678888888999999999998543 233356788898
Q ss_pred CCCcceEE
Q 020156 210 SCPLSGAV 217 (330)
Q Consensus 210 ~~~i~~~v 217 (330)
+ |.++.
T Consensus 91 ~--i~ai~ 96 (100)
T PF09949_consen 91 R--ILAIY 96 (100)
T ss_pred C--EEEEE
Confidence 8 75554
No 256
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=60.39 E-value=4.9 Score=34.65 Aligned_cols=40 Identities=25% Similarity=0.494 Sum_probs=32.3
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r 151 (330)
+.|+||++.|+.++....-++.+...+..+|++|.++..|
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 4579999999998887777888888888999999999875
No 257
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=59.84 E-value=21 Score=29.49 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=23.6
Q ss_pred ccCcChHHHHHHHHHHHHHhCCCCcEEEEEEc
Q 020156 163 FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWS 194 (330)
Q Consensus 163 ~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S 194 (330)
.....+.+-+..+|+.+++.+|..||+++-+-
T Consensus 71 ~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~ 102 (178)
T PF14606_consen 71 MSPEEFRERLDGFVKTIREAHPDTPILLVSPI 102 (178)
T ss_dssp CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE--
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCEEEEecC
Confidence 34457788999999999999999999888754
No 258
>TIGR00455 apsK adenylylsulfate kinase (apsK). Important residue (active site in E.coli) is residue 100 of the seed alignment.
Probab=58.82 E-value=56 Score=26.72 Aligned_cols=39 Identities=28% Similarity=0.535 Sum_probs=31.1
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
..+.++++.|..|+..+...+.+...+...|+.++.+|-
T Consensus 16 ~~~~~i~i~G~~GsGKstla~~l~~~l~~~~~~~~~l~~ 54 (184)
T TIGR00455 16 HRGVVIWLTGLSGSGKSTIANALEKKLESKGYRVYVLDG 54 (184)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECC
Confidence 567899999999988877777777777778888877764
No 259
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=58.32 E-value=47 Score=26.59 Aligned_cols=75 Identities=16% Similarity=0.204 Sum_probs=45.5
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEE
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 193 (330)
.-++-.|..|.........+...+......++++-. |. .+.. .....+.+.+.+.++++.++...|+.++++++.
T Consensus 23 ~~v~N~Gi~G~~~~~~~~~~~~~~~~~~p~~vvi~~-G~--ND~~-~~~~~~~~~~~~~~lv~~i~~~~~~~~iil~~~ 97 (171)
T cd04502 23 LPVVNRGFGGSTLADCLHYFDRLVLPYQPRRVVLYA-GD--NDLA-SGRTPEEVLRDFRELVNRIRAKLPDTPIAIISI 97 (171)
T ss_pred CceeecCcccchHHHHHHHHHhhhccCCCCEEEEEE-ec--Cccc-CCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEEe
Confidence 346778888876544444444444444556665533 22 1211 112245677889999999998888778888874
No 260
>PRK00889 adenylylsulfate kinase; Provisional
Probab=58.02 E-value=25 Score=28.49 Aligned_cols=38 Identities=24% Similarity=0.476 Sum_probs=31.1
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
++.++++.|..|+..+...+.++..+...|..++.+|.
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 45688999999988887777888888788888888865
No 261
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=56.74 E-value=17 Score=30.91 Aligned_cols=36 Identities=22% Similarity=0.590 Sum_probs=31.8
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
++|++-|++|+....+.+.++..|.+++++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 488999999998888999999999999999987654
No 262
>PRK03846 adenylylsulfate kinase; Provisional
Probab=55.32 E-value=87 Score=26.00 Aligned_cols=39 Identities=13% Similarity=0.267 Sum_probs=30.1
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
.+|.+|.+.|..|+..+...+.+...+...|+.++.+|-
T Consensus 22 ~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld~ 60 (198)
T PRK03846 22 HKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLDG 60 (198)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEcC
Confidence 567899999998877766666777777777888888863
No 263
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=53.06 E-value=24 Score=31.82 Aligned_cols=31 Identities=26% Similarity=0.520 Sum_probs=21.9
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHH-HHHHHhCC
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHM-LLRARSKG 142 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~-~~~~~~~g 142 (330)
+.+|.++-+||++|... +|+..+ ++.+...|
T Consensus 107 p~KPLvLSfHG~tGTGK-N~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGK-NYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCeEEEecCCCCCch-hHHHHHHHHHHHhcc
Confidence 47899999999999766 565554 44455444
No 264
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=52.71 E-value=31 Score=31.16 Aligned_cols=60 Identities=10% Similarity=0.172 Sum_probs=44.0
Q ss_pred HhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhc
Q 020156 139 RSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 139 ~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~ 207 (330)
...+|+-+++- +|+.....+....+.+.+.++++|++.. ..-++|.++|+.+++.+++-.
T Consensus 96 ~~~~~DG~IIT-----GAp~e~~~fedv~YW~El~~i~~w~~~~----~~s~LgICwGaQa~a~algGi 155 (302)
T PRK05368 96 KDEKFDGLIIT-----GAPVEQLPFEDVDYWDELKEILDWAKTH----VTSTLFICWAAQAALYHLYGI 155 (302)
T ss_pred ccCCCCEEEEc-----CCCCCCccCCCCchHHHHHHHHHHHHHc----CCCEEEEcHHHHHHHHHcCCC
Confidence 35677777762 3444333444556677899999999986 678999999999999887653
No 265
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=51.83 E-value=62 Score=26.32 Aligned_cols=77 Identities=13% Similarity=0.164 Sum_probs=42.1
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhC---CcEEEEEcCCCCCCCCCCC--CCccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSK---GWRVVVFNSRGCGDSPVTT--PQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~---g~~v~~~d~rG~G~S~~~~--~~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
-+.-.|..|.........+-..+.+. ...++++.. |.-+..... .......+.+.++.+++.++..+++.++++
T Consensus 34 ~v~N~g~~G~t~~~~~~~~~~~~~~~~~~~pd~vii~~-G~ND~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ii~ 112 (199)
T cd01838 34 DVINRGFSGYNTRWALKVLPKIFLEEKLAQPDLVTIFF-GANDAALPGQPQHVPLDEYKENLRKIVSHLKSLSPKTKVIL 112 (199)
T ss_pred heeccCCCcccHHHHHHHHHHhcCccccCCceEEEEEe-cCccccCCCCCCcccHHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 35556776644433333333333333 466666644 211111100 112345667889999999988777778888
Q ss_pred EEE
Q 020156 191 VGW 193 (330)
Q Consensus 191 vG~ 193 (330)
++.
T Consensus 113 ~t~ 115 (199)
T cd01838 113 ITP 115 (199)
T ss_pred eCC
Confidence 764
No 266
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=51.13 E-value=61 Score=25.41 Aligned_cols=70 Identities=11% Similarity=0.098 Sum_probs=40.8
Q ss_pred eCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEE
Q 020156 119 MPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (330)
Q Consensus 119 ~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 192 (330)
-.|+.|.........+...+.....+++++.. |..+... ......+.+.+..+++.++...|+.++++++
T Consensus 17 n~g~~G~~~~~~~~~~~~~~~~~~pd~vvi~~-G~ND~~~---~~~~~~~~~~~~~~i~~i~~~~p~~~ii~~~ 86 (157)
T cd01833 17 HEGHSGYLIDQIAAAAADWVLAAKPDVVLLHL-GTNDLVL---NRDPDTAPDRLRALIDQMRAANPDVKIIVAT 86 (157)
T ss_pred CCCCCCccHHHHHHHhhhccccCCCCEEEEec-cCccccc---CCCHHHHHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 35665655444333333444555677777755 3222211 1233567788999999998887766666654
No 267
>PRK10824 glutaredoxin-4; Provisional
Probab=50.78 E-value=99 Score=23.48 Aligned_cols=82 Identities=12% Similarity=0.153 Sum_probs=52.2
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
..++||+.-|........|.......|.+.|...-.+|.-. + .+++..+..+...---.+|++=
T Consensus 14 ~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~--------------d--~~~~~~l~~~sg~~TVPQIFI~ 77 (115)
T PRK10824 14 ENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQ--------------N--PDIRAELPKYANWPTFPQLWVD 77 (115)
T ss_pred cCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecC--------------C--HHHHHHHHHHhCCCCCCeEEEC
Confidence 57899999997665666777777777777774443444410 0 2344444444321111278999
Q ss_pred EEcHHHHHHHHHHhhcCC
Q 020156 192 GWSLGANILIRYLGHESH 209 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~~~ 209 (330)
|...||+=-+..+.+.++
T Consensus 78 G~~IGG~ddl~~l~~~G~ 95 (115)
T PRK10824 78 GELVGGCDIVIEMYQRGE 95 (115)
T ss_pred CEEEcChHHHHHHHHCCC
Confidence 999999988777766665
No 268
>PRK07933 thymidylate kinase; Validated
Probab=50.04 E-value=42 Score=28.45 Aligned_cols=42 Identities=19% Similarity=0.319 Sum_probs=35.3
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP 157 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~ 157 (330)
+|.+=|.-|+..+.....+.+.+.++|+.|+....|++|.+.
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~~ 43 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRSV 43 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 577788888888778888999999999999999999776543
No 269
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=49.57 E-value=49 Score=26.79 Aligned_cols=44 Identities=16% Similarity=0.356 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEE
Q 020156 170 GDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAV 217 (330)
Q Consensus 170 ~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v 217 (330)
+++.+.++.++.+ +.+|++.|-|..|.+.+++++..++. |+.+|
T Consensus 55 ~~l~~~L~~~~~~--gk~I~~yGA~~kg~tlln~~g~~~~~--I~~vv 98 (160)
T PF08484_consen 55 AELREFLEKLKAE--GKRIAGYGAGAKGNTLLNYFGLDNDL--IDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHT--T--EEEE---SHHHHHHHHHT--TTT--S--EE
T ss_pred HHHHHHHHHHHHc--CCEEEEECcchHHHHHHHHhCCCcce--eEEEE
Confidence 3455555555554 24899999999999999999887775 55544
No 270
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=48.95 E-value=1.6e+02 Score=24.79 Aligned_cols=40 Identities=20% Similarity=0.346 Sum_probs=29.6
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhC-CcEEEEEcCCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSK-GWRVVVFNSRG 152 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~-g~~v~~~d~rG 152 (330)
..+.|++++--.+ ..+.|...+...+.+. |+.+..++...
T Consensus 30 ~~~~i~~IptAs~-~~~~~~~~~~~a~~~l~G~~~~~~~~~~ 70 (212)
T cd03146 30 ARPKVLFVPTASG-DRDEYTARFYAAFESLRGVEVSHLHLFD 70 (212)
T ss_pred CCCeEEEECCCCC-CHHHHHHHHHHHHhhccCcEEEEEeccC
Confidence 4567888887644 3446777888888888 99998888654
No 271
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=48.70 E-value=21 Score=34.22 Aligned_cols=107 Identities=20% Similarity=0.108 Sum_probs=54.7
Q ss_pred CCcEEEEeCCCC---CCCc-hHHHHHHHHHHHhC-CcEEEEEcCCC--CCC--CCCCCCCccCcChHHHHHHHHHHHHHh
Q 020156 112 DSPVLILMPGLT---GGSE-DSYVRHMLLRARSK-GWRVVVFNSRG--CGD--SPVTTPQFYSASFLGDMQEVVAHVGSK 182 (330)
Q Consensus 112 ~~p~vv~~HG~~---g~~~-~~~~~~~~~~~~~~-g~~v~~~d~rG--~G~--S~~~~~~~~~~~~~~D~~~~i~~l~~~ 182 (330)
+.-++|.+-|.+ |++. +.|- ...++.. .--|+.+|||= +|. -+....-..+-++ -|-.-+++|+++.
T Consensus 134 n~tVlVWiyGGGF~sGt~SLdvYd---Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl-~DQqLAl~WV~~N 209 (601)
T KOG4389|consen 134 NLTVLVWIYGGGFYSGTPSLDVYD---GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGL-LDQQLALQWVQEN 209 (601)
T ss_pred CceEEEEEEcCccccCCcceeeec---cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccch-HHHHHHHHHHHHh
Confidence 444788888765 2211 1121 1223333 45567788881 121 1111111112233 3445578888875
Q ss_pred ---CC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 183 ---YP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 183 ---~~--~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
++ ..++.++|.|.|+.-...-+..-+.+..+..+|+-++.
T Consensus 210 i~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS 254 (601)
T KOG4389|consen 210 IAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGS 254 (601)
T ss_pred HHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCC
Confidence 22 34899999999987655443333333345666655543
No 272
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=47.56 E-value=18 Score=29.77 Aligned_cols=61 Identities=11% Similarity=0.170 Sum_probs=44.9
Q ss_pred HhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcC
Q 020156 139 RSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 139 ~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
..++|+-+++- +++.....+....+.+.+.++++|.+.. -.-.+|.++|+.+++.++.-.+
T Consensus 59 ~~~~yDGlIIT-----GApve~~~fe~v~Yw~El~~i~dwa~~~----v~stl~iCWgaqaal~~~yGi~ 119 (175)
T cd03131 59 RDAKFDGLIVT-----GAPVEHLPFEQVDYWEELTEILDWAKTH----VTSTLFSCWAAMAALYYFYGIK 119 (175)
T ss_pred cccCCCEEEEe-----CCCcccCCccccchHHHHHHHHHHHHHh----CcchHHHHHHHHHHHHHHcCcc
Confidence 34567777763 3444444455566778899999999977 5688999999999999886554
No 273
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=47.13 E-value=1 Score=39.51 Aligned_cols=92 Identities=14% Similarity=-0.092 Sum_probs=53.5
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHh---CCCCcE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK---YPKAHL 188 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~---~~~~~i 188 (330)
.....+..||....... ............++.++..|+++++.+....... .+..|...+..++... ....++
T Consensus 87 ~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~ 162 (299)
T COG1073 87 FGESGGDPRGLADSEGY-AEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILA---GLSLGGPSAGALLAWGPTRLDASRI 162 (299)
T ss_pred ccccccccccccCcccc-ccccchhheeeeccccccHHHHHHhhhcCcceEE---EEEeeccchHHHhhcchhHHHhhcc
Confidence 34567888887332221 1112223445678999999999999886432221 2222222233332222 123389
Q ss_pred EEEEEcHHHHHHHHHHhhc
Q 020156 189 YAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 189 ~lvG~SlGg~ia~~~a~~~ 207 (330)
.++|.|+||..++...+..
T Consensus 163 ~~~g~s~g~~~~~~~~~~~ 181 (299)
T COG1073 163 VVWGESLGGALALLLLGAN 181 (299)
T ss_pred cceeeccCceeeccccccc
Confidence 9999999999888766543
No 274
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=46.84 E-value=1e+02 Score=25.22 Aligned_cols=53 Identities=13% Similarity=0.092 Sum_probs=34.8
Q ss_pred HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCC
Q 020156 132 RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYP 184 (330)
Q Consensus 132 ~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 184 (330)
...++++.+++|-|..+|+--.-..+..---.....|++.-..+++.+.+...
T Consensus 17 Sacv~~FkannywV~siDl~eNe~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~ 69 (236)
T KOG4022|consen 17 SACVEFFKANNYWVLSIDLSENEQADSSILVDGNKSWTEQEQSVLEQVGSSLQ 69 (236)
T ss_pred HHHHHHHHhcCeEEEEEeecccccccceEEecCCcchhHHHHHHHHHHHHhhc
Confidence 34667888999999999996543332211122345788888888887766543
No 275
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=46.74 E-value=1.1e+02 Score=22.19 Aligned_cols=81 Identities=15% Similarity=0.219 Sum_probs=52.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCC-cEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKA-HLYA 190 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~-~i~l 190 (330)
..++||+..|....+...|.......|.+.|.....+|.-- + .++++.+..+... ... .+++
T Consensus 11 ~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~--------------~--~~~~~~l~~~tg~-~tvP~vfi 73 (97)
T TIGR00365 11 ENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLE--------------D--PEIRQGIKEYSNW-PTIPQLYV 73 (97)
T ss_pred cCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCC--------------C--HHHHHHHHHHhCC-CCCCEEEE
Confidence 57899999987655666677777778888887766666620 0 2233333333221 122 5666
Q ss_pred EEEcHHHHHHHHHHhhcCC
Q 020156 191 VGWSLGANILIRYLGHESH 209 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~ 209 (330)
=|...||.--+..+.+.++
T Consensus 74 ~g~~iGG~ddl~~l~~~g~ 92 (97)
T TIGR00365 74 KGEFVGGCDIIMEMYQSGE 92 (97)
T ss_pred CCEEEeChHHHHHHHHCcC
Confidence 6788999988877766665
No 276
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=46.07 E-value=57 Score=28.89 Aligned_cols=62 Identities=15% Similarity=0.215 Sum_probs=35.7
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHH
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHV 179 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l 179 (330)
+||++-|++|+..+.....+...+.+.++.|.+++--..+.. ...+....-...++..+...
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~~~---~~~y~~~~~Ek~~R~~l~s~ 63 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLGID---RNDYADSKKEKEARGSLKSA 63 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH-T---TSSS--GGGHHHHHHHHHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccccc---hhhhhchhhhHHHHHHHHHH
Confidence 488999999988888888888888889999999986544411 11122333445555555433
No 277
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=45.69 E-value=1.2e+02 Score=24.04 Aligned_cols=73 Identities=4% Similarity=0.118 Sum_probs=44.1
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEE
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 193 (330)
-+.-.|..|.........+...+ ....+++++..-+. +.. .......+.+.+..+++.+++..++.++++++.
T Consensus 23 ~v~n~g~~G~~~~~~~~~l~~~~-~~~pd~vvl~~G~N---D~~-~~~~~~~~~~~l~~li~~~~~~~~~~~vi~~~~ 95 (169)
T cd01828 23 KVANRGISGDTTRGLLARLDEDV-ALQPKAIFIMIGIN---DLA-QGTSDEDIVANYRTILEKLRKHFPNIKIVVQSI 95 (169)
T ss_pred ceEecCcccccHHHHHHHHHHHh-ccCCCEEEEEeecc---CCC-CCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 46677877766544444443333 44567777755222 111 122335677889999999988777767777664
No 278
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=44.27 E-value=37 Score=32.91 Aligned_cols=42 Identities=19% Similarity=0.318 Sum_probs=36.9
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~ 153 (330)
+.|+||++-|+-|+....-++.+...+..+|++|.++..|..
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~~ 79 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPSD 79 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCCH
Confidence 578999999999888878889999999999999999988743
No 279
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=44.24 E-value=65 Score=26.35 Aligned_cols=53 Identities=19% Similarity=0.367 Sum_probs=41.0
Q ss_pred HHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHH
Q 020156 138 ARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLG 196 (330)
Q Consensus 138 ~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlG 196 (330)
+.+.|++.+++|.=.+=..+ +......++.+.++.+++.++..++.++--|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~------~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPP------YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCC------CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 78899999999996653221 223445788889999999888778999999986
No 280
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=43.71 E-value=49 Score=26.81 Aligned_cols=41 Identities=10% Similarity=0.321 Sum_probs=35.9
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCC
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G 154 (330)
+.|+-+=|+.++.....+..++..+.++||+|.++-+-+|+
T Consensus 2 ~~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 2 MKILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred CcEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 35777788887777788899999999999999999999998
No 281
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=43.57 E-value=47 Score=26.62 Aligned_cols=39 Identities=10% Similarity=0.351 Sum_probs=30.6
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G 154 (330)
|+.+-|..|+........++..+..+|++|.++..-+++
T Consensus 1 vi~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 1 VLQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 355668888777777788888898899999999876554
No 282
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=43.23 E-value=1.1e+02 Score=26.50 Aligned_cols=65 Identities=17% Similarity=0.182 Sum_probs=38.4
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc-cCcChHHHHHHHHHHHHHhCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQF-YSASFLGDMQEVVAHVGSKYP 184 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~-~~~~~~~D~~~~i~~l~~~~~ 184 (330)
++++-|.+++.. ..++..|.++|++|+..+...-.......... ......+++.++++.+...++
T Consensus 11 ~vlItG~s~gIG----~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 76 (266)
T PRK06171 11 IIIVTGGSSGIG----LAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFG 76 (266)
T ss_pred EEEEeCCCChHH----HHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 456667544333 56778889999999998865422111000000 112234688888888877765
No 283
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=42.78 E-value=56 Score=22.85 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=32.5
Q ss_pred ChHHHHHHHHHHHHHhC---CCCcEEEEEEcHHHHHHHHHHhhcCC
Q 020156 167 SFLGDMQEVVAHVGSKY---PKAHLYAVGWSLGANILIRYLGHESH 209 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~~---~~~~i~lvG~SlGg~ia~~~a~~~~~ 209 (330)
+....+.+.|+|++.+. +..++.++|-|-|=.+|...++.+.-
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg~ 63 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFGA 63 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhcC
Confidence 56688889999998742 22389999999999999888877754
No 284
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=41.04 E-value=22 Score=30.23 Aligned_cols=89 Identities=18% Similarity=0.210 Sum_probs=49.7
Q ss_pred CCcEEEEeCCCCCCCc-hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-----CCcc-CcChHHHHHHHHH------H
Q 020156 112 DSPVLILMPGLTGGSE-DSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT-----PQFY-SASFLGDMQEVVA------H 178 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~-~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~-----~~~~-~~~~~~D~~~~i~------~ 178 (330)
.++.|.+++--++.+. +.|+......+.+.|+.+.-++.----...... .-.+ ..+.+-++...++ -
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~~~~~~Ie~~l~~~d~IyVgGGNTF~LL~~lke~gld~i 110 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLSKPPLAAIENKLMKADIIYVGGGNTFNLLQELKETGLDDI 110 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeeccCCCHHHHHHhhhhccEEEECCchHHHHHHHHHHhCcHHH
Confidence 3678999987655443 347788888889999999888763110000000 0011 1223333333322 1
Q ss_pred HHHhCCCCcEEEEEEcHHHHHHH
Q 020156 179 VGSKYPKAHLYAVGWSLGANILI 201 (330)
Q Consensus 179 l~~~~~~~~i~lvG~SlGg~ia~ 201 (330)
++++... =+..+|+|.|++++.
T Consensus 111 Ir~~vk~-G~~YiG~SAGA~ia~ 132 (224)
T COG3340 111 IRERVKA-GTPYIGWSAGANIAG 132 (224)
T ss_pred HHHHHHc-CCceEEeccCceeec
Confidence 2332222 367899999998875
No 285
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=41.01 E-value=46 Score=28.29 Aligned_cols=35 Identities=29% Similarity=0.514 Sum_probs=29.5
Q ss_pred EeCCCCCCCchHHHHHHHHHHH-hCCcEEEEEcCCC
Q 020156 118 LMPGLTGGSEDSYVRHMLLRAR-SKGWRVVVFNSRG 152 (330)
Q Consensus 118 ~~HG~~g~~~~~~~~~~~~~~~-~~g~~v~~~d~rG 152 (330)
.+=|.+|+..+..+..++..+. +.|..++++|.=|
T Consensus 27 ~I~G~TGsGKS~~~~~ll~~l~~~~~~~~ii~D~~G 62 (229)
T PF01935_consen 27 AIFGTTGSGKSNTVKVLLEELLKKKGAKVIIFDPHG 62 (229)
T ss_pred EEECCCCCCHHHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 3558888888888889999998 8999999999944
No 286
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=40.54 E-value=57 Score=31.06 Aligned_cols=39 Identities=15% Similarity=0.342 Sum_probs=32.9
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
.+|.+|++-|..|...+.....++..+.++|++|.+++.
T Consensus 98 ~~~~vi~lvG~~GvGKTTtaaKLA~~l~~~G~kV~lV~~ 136 (429)
T TIGR01425 98 GKQNVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVCA 136 (429)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 468899999999988877778888888888999888766
No 287
>PRK06490 glutamine amidotransferase; Provisional
Probab=40.34 E-value=2.4e+02 Score=24.34 Aligned_cols=84 Identities=21% Similarity=0.302 Sum_probs=47.3
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC-CCCCCC--CCC---------C--CccCcChHHHHHHHHH
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR-GCGDSP--VTT---------P--QFYSASFLGDMQEVVA 177 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r-G~G~S~--~~~---------~--~~~~~~~~~D~~~~i~ 177 (330)
...++|+.|--.+.. ..+...+.+.|+.+-+++.. |- ..+ ... + ......|..++.++|+
T Consensus 7 ~~~vlvi~h~~~~~~-----g~l~~~l~~~g~~~~v~~~~~~~-~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~ 80 (239)
T PRK06490 7 KRPVLIVLHQERSTP-----GRVGQLLQERGYPLDIRRPRLGD-PLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWIS 80 (239)
T ss_pred CceEEEEecCCCCCC-----hHHHHHHHHCCCceEEEeccCCC-CCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHH
Confidence 556778888753332 33556677788877776543 21 111 000 0 0111234455555555
Q ss_pred HHHHhCCCCcEEEEEEcHHHHHHHHHHh
Q 020156 178 HVGSKYPKAHLYAVGWSLGANILIRYLG 205 (330)
Q Consensus 178 ~l~~~~~~~~i~lvG~SlGg~ia~~~a~ 205 (330)
.+... .+=++|.++|..+...+++
T Consensus 81 ~~~~~----~~PvLGIC~G~Qlla~alG 104 (239)
T PRK06490 81 VPLKE----NKPFLGICLGAQMLARHLG 104 (239)
T ss_pred HHHHC----CCCEEEECHhHHHHHHHcC
Confidence 44443 4569999999999888764
No 288
>PLN02924 thymidylate kinase
Probab=40.34 E-value=75 Score=27.14 Aligned_cols=43 Identities=12% Similarity=0.179 Sum_probs=36.1
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~ 153 (330)
..++.+|.+=|..|+..+.-...+.+.+..+|+.|+.+..|+.
T Consensus 13 ~~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~~ 55 (220)
T PLN02924 13 ESRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPDR 55 (220)
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCCC
Confidence 3567789999999988887788889999999999988887763
No 289
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=40.32 E-value=74 Score=26.12 Aligned_cols=43 Identities=9% Similarity=0.201 Sum_probs=34.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G 154 (330)
..++++.+=|..|+..+..+..++..+..+|++|-++-+-|+|
T Consensus 4 ~~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~ 46 (173)
T PRK10751 4 TMIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHD 46 (173)
T ss_pred CCceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence 3456777779888888788889998888889988777776665
No 290
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=40.28 E-value=49 Score=26.83 Aligned_cols=34 Identities=15% Similarity=-0.011 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC
Q 020156 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESH 209 (330)
Q Consensus 175 ~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~ 209 (330)
+++.+.++. -..-.++|.|.|+.++..++...+.
T Consensus 16 vl~aL~e~g-i~~d~v~GtSaGAi~aa~~a~g~~~ 49 (172)
T cd07198 16 VAKALRERG-PLIDIIAGTSAGAIVAALLASGRDL 49 (172)
T ss_pred HHHHHHHcC-CCCCEEEEECHHHHHHHHHHcCCCH
Confidence 455555542 2266999999999999999986543
No 291
>PRK13700 conjugal transfer protein TraD; Provisional
Probab=40.23 E-value=47 Score=33.77 Aligned_cols=37 Identities=24% Similarity=0.452 Sum_probs=33.2
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
=++++|.+|+..+..++.++....++|-+++++|.-|
T Consensus 187 H~li~GttGSGKS~~i~~LL~~ir~RGdrAIIyD~~G 223 (732)
T PRK13700 187 NFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSG 223 (732)
T ss_pred ceEEeCCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 3678999998888888999999999999999999977
No 292
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=39.52 E-value=45 Score=30.16 Aligned_cols=33 Identities=21% Similarity=0.117 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcC
Q 020156 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 175 ~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
+++.+.+. +-..=.++|.|+|+.++..|++..+
T Consensus 33 vL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 33 VIKALEEA-GIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 45555554 2225589999999999999998643
No 293
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=39.47 E-value=1.8e+02 Score=23.31 Aligned_cols=54 Identities=15% Similarity=0.250 Sum_probs=35.3
Q ss_pred HHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEc
Q 020156 138 ARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWS 194 (330)
Q Consensus 138 ~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S 194 (330)
+.+...+++++.. |. .+..........+.+.+..+++.+++..++.+++++|..
T Consensus 52 l~~~~pd~Vii~~-G~--ND~~~~~~~~~~~~~~~~~li~~i~~~~~~~~iv~~~~~ 105 (189)
T cd01825 52 LAALPPDLVILSY-GT--NEAFNKQLNASEYRQQLREFIKRLRQILPNASILLVGPP 105 (189)
T ss_pred HhhCCCCEEEEEC-CC--cccccCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3455667777655 22 221112223456788999999999998788889998853
No 294
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=39.24 E-value=1.4e+02 Score=24.12 Aligned_cols=71 Identities=18% Similarity=0.230 Sum_probs=38.7
Q ss_pred EEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEE
Q 020156 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (330)
Q Consensus 117 v~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 192 (330)
+.-.|..|.....+...+- .+.....+++++..=+ .+.. .......+.+++.++++.++.+.++.++++++
T Consensus 43 ~~n~g~~G~t~~~~~~~l~-~~~~~~pd~Vii~~G~---ND~~-~~~~~~~~~~~l~~li~~i~~~~~~~~iiv~~ 113 (191)
T cd01836 43 WRLFAKTGATSADLLRQLA-PLPETRFDVAVISIGV---NDVT-HLTSIARWRKQLAELVDALRAKFPGARVVVTA 113 (191)
T ss_pred EEEEecCCcCHHHHHHHHH-hcccCCCCEEEEEecc---cCcC-CCCCHHHHHHHHHHHHHHHHhhCCCCEEEEEC
Confidence 3444655544433333222 2344556677664411 1111 01123467788999999998877777777764
No 295
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=39.22 E-value=1.2e+02 Score=28.02 Aligned_cols=88 Identities=13% Similarity=0.084 Sum_probs=54.2
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-CCccCcChHHHHHHHHHHHHHhCC--CCcE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT-PQFYSASFLGDMQEVVAHVGSKYP--KAHL 188 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~-~~~~~~~~~~D~~~~i~~l~~~~~--~~~i 188 (330)
...+||++=||.|..+ .++.....-..+.||.++.+-.+-+-..-..+ +... ..++...+..+...+. ..++
T Consensus 37 s~k~Iv~~~gWag~~~-r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~s----l~~~~~~l~~L~~~~~~~~~pi 111 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAID-RNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILS----LSLASTRLSELLSDYNSDPCPI 111 (350)
T ss_pred ccccEEEEeeeccccc-hhHHHHHHHHhcCCceEEEecCcccccccccccccch----hhHHHHHHHHHhhhccCCcCce
Confidence 3334666667777555 46677777788899999998887553322111 1111 2333344444444433 4488
Q ss_pred EEEEEcHHHHHHHHHH
Q 020156 189 YAVGWSLGANILIRYL 204 (330)
Q Consensus 189 ~lvG~SlGg~ia~~~a 204 (330)
++--+|+||...+...
T Consensus 112 ~fh~FS~ng~~~~~si 127 (350)
T KOG2521|consen 112 IFHVFSGNGVRLMYSI 127 (350)
T ss_pred EEEEecCCceeehHHH
Confidence 8889999998776544
No 296
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=39.13 E-value=1e+02 Score=23.04 Aligned_cols=56 Identities=14% Similarity=0.262 Sum_probs=36.0
Q ss_pred EEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHh
Q 020156 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK 182 (330)
Q Consensus 117 v~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~ 182 (330)
|++||-.|.......+.++..+ |+.++.+|..-...+ +.....+.+..+++.+...
T Consensus 1 ill~G~~G~GKT~l~~~la~~l---~~~~~~i~~~~~~~~-------~~~~~~~~i~~~~~~~~~~ 56 (132)
T PF00004_consen 1 ILLHGPPGTGKTTLARALAQYL---GFPFIEIDGSELISS-------YAGDSEQKIRDFFKKAKKS 56 (132)
T ss_dssp EEEESSTTSSHHHHHHHHHHHT---TSEEEEEETTHHHTS-------STTHHHHHHHHHHHHHHHT
T ss_pred CEEECcCCCCeeHHHHHHHhhc---ccccccccccccccc-------ccccccccccccccccccc
Confidence 6899999988876666665444 788888988644311 2223445666666665554
No 297
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=39.09 E-value=2.3e+02 Score=25.15 Aligned_cols=38 Identities=24% Similarity=0.396 Sum_probs=26.9
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCC
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
++++++|+..+..+.....+++.|.++|++|.++...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 46666766534444666788888988999998876544
No 298
>PRK10279 hypothetical protein; Provisional
Probab=39.04 E-value=44 Score=30.15 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=23.9
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhc
Q 020156 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 175 ~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~ 207 (330)
+++.+.+. +-..-.++|.|+|+.++..||+..
T Consensus 23 VL~aL~E~-gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 23 VINALKKV-GIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHc-CCCcCEEEEEcHHHHHHHHHHcCC
Confidence 45556554 223669999999999999999754
No 299
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=38.77 E-value=2.2e+02 Score=23.41 Aligned_cols=77 Identities=17% Similarity=0.270 Sum_probs=42.0
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCc--EEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE--
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGW--RVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV-- 191 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~--~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv-- 191 (330)
+|-++|.-+......+......+.+.+. -++.+|.+| +.+....++++.+.. .+..-+..+
T Consensus 3 vv~i~g~I~~~~~~~l~~~l~~a~~~~~~~vvl~InSpG--------------G~v~~~~~i~~~l~~-~~kPvia~v~~ 67 (187)
T cd07020 3 VLEINGAITPATADYLERAIDQAEEGGADALIIELDTPG--------------GLLDSTREIVQAILA-SPVPVVVYVYP 67 (187)
T ss_pred EEEEeeEEChHHHHHHHHHHHHHHhCCCCEEEEEEECCC--------------CCHHHHHHHHHHHHh-CCCCEEEEEec
Confidence 5666765543333334444445544433 345568877 223444455555543 233233344
Q ss_pred --EEcHHHHHHHHHHhhc
Q 020156 192 --GWSLGANILIRYLGHE 207 (330)
Q Consensus 192 --G~SlGg~ia~~~a~~~ 207 (330)
|+..||...+.+++..
T Consensus 68 ~~G~AasgG~~iala~D~ 85 (187)
T cd07020 68 SGARAASAGTYILLAAHI 85 (187)
T ss_pred CCCCchhHHHHHHHhCCc
Confidence 8999988888887765
No 300
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=38.67 E-value=52 Score=26.80 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=22.5
Q ss_pred EeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC
Q 020156 118 LMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (330)
Q Consensus 118 ~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r 151 (330)
+..+-+|...+.....++..+.++|++|+++|.=
T Consensus 3 v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 3 VTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 3344434444445566788888899999999993
No 301
>cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS). The end-product PAPS is a biologically "activated" sulfate form important for the assimilation of inorganic sulfate.
Probab=38.39 E-value=1.1e+02 Score=24.10 Aligned_cols=35 Identities=23% Similarity=0.447 Sum_probs=27.4
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
+|++-|..|+..+.+.+.+...+...|+.++.+|.
T Consensus 1 ~i~i~G~~GsGKSTla~~L~~~l~~~g~~~~~i~~ 35 (149)
T cd02027 1 VIWLTGLSGSGKSTIARALEEKLFQRGRPVYVLDG 35 (149)
T ss_pred CEEEEcCCCCCHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 46777999888877778888887778888887763
No 302
>PF10412 TrwB_AAD_bind: Type IV secretion-system coupling protein DNA-binding domain; InterPro: IPR019476 The plasmid conjugative coupling protein TraD (also known as TrwB) is a basic integral inner-membrane nucleoside-triphosphate-binding protein. It is the structural prototype for the type IV secretion system coupling proteins, a family of proteins essential for macromolecular transport between cells []. This protein forms hexamers from six structurally very similar protomers []. This hexamer contains a central channel running from the cytosolic pole (formed by the all-alpha domains) to the membrane pole ending at the transmembrane pore shaped by 12 transmembrane helices, rendering an overall mushroom-like structure. The TrwB all-alpha domain appears to be the DNA-binding domain of the structure. ; PDB: 1E9S_D 1E9R_F 1GKI_B 1GL7_G 1GL6_A.
Probab=38.29 E-value=40 Score=31.57 Aligned_cols=36 Identities=33% Similarity=0.719 Sum_probs=28.4
Q ss_pred EEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCC
Q 020156 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 117 v~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
+++.|.+|+..+..+..++..+.++|.+++++|.-|
T Consensus 18 ~li~G~~GsGKT~~i~~ll~~~~~~g~~~iI~D~kg 53 (386)
T PF10412_consen 18 ILIIGATGSGKTQAIRHLLDQIRARGDRAIIYDPKG 53 (386)
T ss_dssp EEEEE-TTSSHHHHHHHHHHHHHHTT-EEEEEEETT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 456788888777788899999999999999999764
No 303
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=38.22 E-value=63 Score=22.40 Aligned_cols=32 Identities=16% Similarity=0.343 Sum_probs=23.8
Q ss_pred EeCCCCCCCchHHHHHHHHHHHhCCcEEEEEc
Q 020156 118 LMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 118 ~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d 149 (330)
++-|..|...+.....++..+.+.|++|+.+|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 34455555565666778888888999999999
No 304
>PRK09004 FMN-binding protein MioC; Provisional
Probab=37.88 E-value=1.7e+02 Score=23.03 Aligned_cols=77 Identities=14% Similarity=0.261 Sum_probs=42.0
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC------CCCccCcChHHHHHHHHHHHHHh---CCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT------TPQFYSASFLGDMQEVVAHVGSK---YPKA 186 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~------~~~~~~~~~~~D~~~~i~~l~~~---~~~~ 186 (330)
|+++.|...+..+.+...+...+.+.|+.+-++|..-.-..+.. .+.+.....-++...+.+++... ..+.
T Consensus 4 i~I~ygS~tGnae~~A~~l~~~~~~~g~~~~~~~~~~~~~l~~~~~li~~~sT~G~Ge~p~~~~~f~~~L~~~~~~l~g~ 83 (146)
T PRK09004 4 ITLISGSTLGGAEYVADHLAEKLEEAGFSTETLHGPLLDDLSASGLWLIVTSTHGAGDLPDNLQPFFEELQEQKPDLSQV 83 (146)
T ss_pred EEEEEEcCchHHHHHHHHHHHHHHHcCCceEEeccCCHHHhccCCeEEEEECCCCCCCCChhHHHHHHHHHhcCCCCCCC
Confidence 55566655555556677788888888999887775321000000 01111223446677777777654 2233
Q ss_pred cEEEEE
Q 020156 187 HLYAVG 192 (330)
Q Consensus 187 ~i~lvG 192 (330)
++.++|
T Consensus 84 ~~aVfG 89 (146)
T PRK09004 84 RFAAIG 89 (146)
T ss_pred EEEEEe
Confidence 555555
No 305
>PRK12467 peptide synthase; Provisional
Probab=37.88 E-value=1.4e+02 Score=37.14 Aligned_cols=86 Identities=16% Similarity=0.091 Sum_probs=51.7
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEE
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 192 (330)
.+.|+..|...+.... ...+.. ....+..++++..++.-.-.. .. ..+.+-....+++++...+..+..+.|
T Consensus 3692 ~~~l~~~h~~~r~~~~--~~~l~~-~l~~~~~~~~l~~~~~~~d~~--~~---~~~~~~~~~y~~~~~~~~~~~p~~l~g 3763 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFD--YEPLAV-ILEGDRHVLGLTCRHLLDDGW--QD---TSLQAMAVQYADYILWQQAKGPYGLLG 3763 (3956)
T ss_pred ccceeeechhhcchhh--hHHHHH-HhCCCCcEEEEeccccccccC--Cc---cchHHHHHHHHHHHHHhccCCCeeeee
Confidence 3559999998665442 233333 334567888887776532211 11 122222334455555555666899999
Q ss_pred EcHHHHHHHHHHhh
Q 020156 193 WSLGANILIRYLGH 206 (330)
Q Consensus 193 ~SlGg~ia~~~a~~ 206 (330)
+|+||.++..++..
T Consensus 3764 ~s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3764 WSLGGTLARLVAEL 3777 (3956)
T ss_pred eecchHHHHHHHHH
Confidence 99999999877653
No 306
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=37.58 E-value=63 Score=29.18 Aligned_cols=37 Identities=24% Similarity=0.336 Sum_probs=25.8
Q ss_pred EEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q 020156 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP 157 (330)
Q Consensus 117 v~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~ 157 (330)
|++-|..|-.. .+.+..|.+.||.|+++|.--.|...
T Consensus 3 iLVtGGAGYIG----SHtv~~Ll~~G~~vvV~DNL~~g~~~ 39 (329)
T COG1087 3 VLVTGGAGYIG----SHTVRQLLKTGHEVVVLDNLSNGHKI 39 (329)
T ss_pred EEEecCcchhH----HHHHHHHHHCCCeEEEEecCCCCCHH
Confidence 45556545333 35667788899999999998766543
No 307
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=37.55 E-value=1.3e+02 Score=24.22 Aligned_cols=71 Identities=15% Similarity=0.154 Sum_probs=35.1
Q ss_pred EEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEE
Q 020156 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (330)
Q Consensus 117 v~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 192 (330)
+.--|.+|...................+++++.+ |.-+.. ........+.+++..+++.++. ++.++++++
T Consensus 42 ~~N~g~~G~~~~~~~~~~~~~~~~~~~d~vii~~-G~ND~~--~~~~~~~~~~~~~~~~i~~i~~--~~~~vil~~ 112 (185)
T cd01832 42 YANLAVRGRRTAQILAEQLPAALALRPDLVTLLA-GGNDIL--RPGTDPDTYRADLEEAVRRLRA--AGARVVVFT 112 (185)
T ss_pred EeeccCCcchHHHHHHHHHHHHHhcCCCEEEEec-cccccc--cCCCCHHHHHHHHHHHHHHHHh--CCCEEEEec
Confidence 3334555544332223223333445677777755 322221 1123344566777788887772 333555554
No 308
>PRK06696 uridine kinase; Validated
Probab=37.28 E-value=71 Score=27.15 Aligned_cols=38 Identities=13% Similarity=0.379 Sum_probs=31.1
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEc
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d 149 (330)
++|.+|.+-|..|+..+.....++..+.+.|..++.+.
T Consensus 20 ~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 20 TRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 57899999999998888777888888877788877743
No 309
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.11 E-value=42 Score=27.23 Aligned_cols=31 Identities=29% Similarity=0.462 Sum_probs=24.5
Q ss_pred cEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcC
Q 020156 187 HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCN 221 (330)
Q Consensus 187 ~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~ 221 (330)
.+.+|.+|||-.+|-..+...+ ++.++++.+
T Consensus 58 hirlvAwSMGVwvAeR~lqg~~----lksatAiNG 88 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQGIR----LKSATAING 88 (214)
T ss_pred hhhhhhhhHHHHHHHHHHhhcc----ccceeeecC
Confidence 5778999999999988887665 567776654
No 310
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=36.51 E-value=58 Score=26.79 Aligned_cols=34 Identities=15% Similarity=-0.088 Sum_probs=24.1
Q ss_pred HHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcC
Q 020156 174 EVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 174 ~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
.+++.+.+. .-..=.++|.|.||.++..++....
T Consensus 16 Gvl~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 16 GALKALEEA-GILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHHc-CCCcceEEEECHHHHHHHHHHcCCC
Confidence 455555554 2224699999999999999997543
No 311
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=36.49 E-value=1.1e+02 Score=23.77 Aligned_cols=29 Identities=14% Similarity=0.133 Sum_probs=21.2
Q ss_pred CchHHHHHHHHHHHhCCcEEEEEcCCCCC
Q 020156 126 SEDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (330)
Q Consensus 126 ~~~~~~~~~~~~~~~~g~~v~~~d~rG~G 154 (330)
..+.++..++..+.++|++|.++-...-+
T Consensus 13 G~e~~~~~l~~~l~~~G~~v~v~~~~~~~ 41 (177)
T PF13439_consen 13 GAERVVLNLARALAKRGHEVTVVSPGVKD 41 (177)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEESS-TT
T ss_pred hHHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 34567889999999999999998655443
No 312
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=36.20 E-value=1.6e+02 Score=20.91 Aligned_cols=82 Identities=13% Similarity=0.234 Sum_probs=51.7
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
+.|+||+..|.++.....|.......|.+.|.....+|... + .++++.+..+....--..+++=
T Consensus 7 ~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~--------------~--~~~~~~l~~~~g~~tvP~vfi~ 70 (90)
T cd03028 7 ENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILE--------------D--EEVRQGLKEYSNWPTFPQLYVN 70 (90)
T ss_pred cCCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCC--------------C--HHHHHHHHHHhCCCCCCEEEEC
Confidence 57899999998777777777888888888887766666531 0 2333333333221111146666
Q ss_pred EEcHHHHHHHHHHhhcCC
Q 020156 192 GWSLGANILIRYLGHESH 209 (330)
Q Consensus 192 G~SlGg~ia~~~a~~~~~ 209 (330)
|.-.||.--+..+.+.++
T Consensus 71 g~~iGG~~~l~~l~~~g~ 88 (90)
T cd03028 71 GELVGGCDIVKEMHESGE 88 (90)
T ss_pred CEEEeCHHHHHHHHHcCC
Confidence 777888877766655443
No 313
>TIGR02759 TraD_Ftype type IV conjugative transfer system coupling protein TraD. The TraD protein performs an essential coupling function in conjugative type IV secretion systems. This protein sits at the inner membrane in contact with the assembled pilus and its scaffold as well as the relaxosome-plasmid DNA complex (through TraM).
Probab=36.09 E-value=59 Score=32.22 Aligned_cols=38 Identities=26% Similarity=0.490 Sum_probs=31.5
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~ 153 (330)
=++++|-+|+..+..+..+.....++|.+++++|.-|-
T Consensus 178 h~li~G~tGsGKs~~i~~ll~~~~~~g~~~ii~D~~g~ 215 (566)
T TIGR02759 178 HILIHGTTGSGKSVAIRKLLRWIRQRGDRAIIYDKGCT 215 (566)
T ss_pred ceEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 46778888887777788888888899999999998653
No 314
>PRK05541 adenylylsulfate kinase; Provisional
Probab=36.03 E-value=69 Score=25.92 Aligned_cols=38 Identities=18% Similarity=0.332 Sum_probs=30.1
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEc
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d 149 (330)
..|.+|++-|..|+..+...+.+...+...+..++.+|
T Consensus 5 ~~~~~I~i~G~~GsGKst~a~~l~~~l~~~~~~~~~~~ 42 (176)
T PRK05541 5 PNGYVIWITGLAGSGKTTIAKALYERLKLKYSNVIYLD 42 (176)
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEEEe
Confidence 45679999999998887777777777777777777775
No 315
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=35.21 E-value=68 Score=27.39 Aligned_cols=32 Identities=16% Similarity=-0.090 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhc
Q 020156 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 175 ~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~ 207 (330)
+++.+.+. +-..-.++|.|.|+.++..++...
T Consensus 18 vL~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 18 FLAALLEM-GLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHc-CCCceEEEEeCHHHHHHHHHHcCC
Confidence 44555444 222558999999999999998644
No 316
>PF02492 cobW: CobW/HypB/UreG, nucleotide-binding domain; InterPro: IPR003495 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CobW proteins are generally found proximal to the trimeric cobaltochelatase subunit CobN, which is essential for vitamin B12 (cobalamin) biosynthesis []. They contain a P-loop nucleotide-binding loop in the N-terminal domain and a histidine-rich region in the C-terminal portion suggesting a role in metal binding, possibly as an intermediary between the cobalt transport and chelation systems. CobW might be involved in cobalt reduction leading to cobalt(I) corrinoids. This entry represents CobW-like proteins, including P47K (P31521 from SWISSPROT), a Pseudomonas chlororaphis protein needed for nitrile hydratase expression [], and urease accessory protein UreG, which acts as a chaperone in the activation of urease upon insertion of nickel into the active site [].; PDB: 2WSM_B 1NIJ_A 2HF9_A 2HF8_B.
Probab=35.14 E-value=56 Score=26.66 Aligned_cols=33 Identities=27% Similarity=0.574 Sum_probs=23.7
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEE
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVF 148 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~ 148 (330)
+|+++.|+.|+....++++++. ...+|.++.++
T Consensus 1 Pv~ii~GfLGsGKTTli~~ll~-~~~~~~~~~vI 33 (178)
T PF02492_consen 1 PVIIITGFLGSGKTTLINHLLK-RNRQGERVAVI 33 (178)
T ss_dssp -EEEEEESTTSSHHHHHHHHHH-HHTTTS-EEEE
T ss_pred CEEEEEcCCCCCHHHHHHHHHH-HhcCCceeEEE
Confidence 4889999999998888888876 55566655443
No 317
>PRK13529 malate dehydrogenase; Provisional
Probab=34.88 E-value=52 Score=32.37 Aligned_cols=80 Identities=18% Similarity=0.211 Sum_probs=43.5
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCc-------EEEEEcCCCCCCCCCCCC---C-ccC---c---Ch-----HHHHH
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGW-------RVVVFNSRGCGDSPVTTP---Q-FYS---A---SF-----LGDMQ 173 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~-------~v~~~d~rG~G~S~~~~~---~-~~~---~---~~-----~~D~~ 173 (330)
-|++.|. |+....-.+.+...+.++|. +++.+|..|.=..+...- + .+. . .| ..++.
T Consensus 297 riv~~GA-GsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~~~~~~~~~~~~~~~L~ 375 (563)
T PRK13529 297 RIVFLGA-GSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKREELADWDTEGDVISLL 375 (563)
T ss_pred EEEEECC-CHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhcccccccccccCCCCHH
Confidence 4555665 33333444556666666787 899999998643322110 0 000 0 01 12455
Q ss_pred HHHHHHHHhCCCCcEEEEEEcH-HHHHHHH
Q 020156 174 EVVAHVGSKYPKAHLYAVGWSL-GANILIR 202 (330)
Q Consensus 174 ~~i~~l~~~~~~~~i~lvG~Sl-Gg~ia~~ 202 (330)
++|+.++ |-+++|.|- ||...-.
T Consensus 376 e~v~~~k------PtvLIG~S~~~g~Ft~e 399 (563)
T PRK13529 376 EVVRNVK------PTVLIGVSGQPGAFTEE 399 (563)
T ss_pred HHHhccC------CCEEEEecCCCCCCCHH
Confidence 5555444 569999998 6654433
No 318
>PRK13768 GTPase; Provisional
Probab=34.83 E-value=69 Score=27.99 Aligned_cols=36 Identities=14% Similarity=0.361 Sum_probs=29.3
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
.++++-|.+|...+.+...++..+..+|.+|+++|.
T Consensus 3 ~~i~v~G~~G~GKTt~~~~~~~~l~~~g~~v~~i~~ 38 (253)
T PRK13768 3 YIVFFLGTAGSGKTTLTKALSDWLEEQGYDVAIVNL 38 (253)
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHhcCCceEEEEC
Confidence 466777887777777788888888889999999875
No 319
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=34.60 E-value=1.3e+02 Score=25.64 Aligned_cols=52 Identities=17% Similarity=0.284 Sum_probs=34.1
Q ss_pred HHHHHHHHhCCcEEEEEcCCCCCCCCC-------CCCCccC----cChHHHHHHHHHHHHHhCCCCcE
Q 020156 132 RHMLLRARSKGWRVVVFNSRGCGDSPV-------TTPQFYS----ASFLGDMQEVVAHVGSKYPKAHL 188 (330)
Q Consensus 132 ~~~~~~~~~~g~~v~~~d~rG~G~S~~-------~~~~~~~----~~~~~D~~~~i~~l~~~~~~~~i 188 (330)
..++..+.+.|-.|++- |+... ..+.... .+..+..+++++|+.++||+-.+
T Consensus 19 l~lak~f~elgN~VIi~-----gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv 81 (245)
T COG3967 19 LALAKRFLELGNTVIIC-----GRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV 81 (245)
T ss_pred HHHHHHHHHhCCEEEEe-----cCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence 56888899999999885 44321 1222111 23345678999999999996543
No 320
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=34.40 E-value=3.7e+02 Score=24.74 Aligned_cols=83 Identities=13% Similarity=0.193 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCC--cEEEEEEcHHHHHHHHHHhh
Q 020156 129 SYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKA--HLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 129 ~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~--~i~lvG~SlGg~ia~~~a~~ 206 (330)
.-...-++.+.++||+++.+|--|-=.. .....+.+..+.+-+....+.. .+.++--+.-|.-++.=|..
T Consensus 208 aVafDAi~~Akar~~DvvliDTAGRLhn--------k~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~ 279 (340)
T COG0552 208 AVAFDAIQAAKARGIDVVLIDTAGRLHN--------KKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKI 279 (340)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCcccccC--------chhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHH
Confidence 3456677888899999999998764222 2345677777777776665433 37777788888888888888
Q ss_pred cCCCCCcceEEEE
Q 020156 207 ESHSCPLSGAVSL 219 (330)
Q Consensus 207 ~~~~~~i~~~v~~ 219 (330)
+.+...+++.|+.
T Consensus 280 F~eav~l~GiIlT 292 (340)
T COG0552 280 FNEAVGLDGIILT 292 (340)
T ss_pred HHHhcCCceEEEE
Confidence 8776667777653
No 321
>PRK13973 thymidylate kinase; Provisional
Probab=34.33 E-value=1e+02 Score=26.03 Aligned_cols=40 Identities=25% Similarity=0.400 Sum_probs=34.1
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~ 153 (330)
..+|.+=|..|+..+.-...+...+.++|+.|+....||.
T Consensus 3 g~~IviEG~dGsGKtTq~~~l~~~l~~~g~~~~~~~~p~~ 42 (213)
T PRK13973 3 GRFITFEGGEGAGKSTQIRLLAERLRAAGYDVLVTREPGG 42 (213)
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 3577789999988877788889999999999999998873
No 322
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=33.90 E-value=51 Score=31.97 Aligned_cols=70 Identities=11% Similarity=0.173 Sum_probs=49.3
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCC-CcEE
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPK-AHLY 189 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~-~~i~ 189 (330)
.+.|+||++-|+.++.....++.+...+..+||+|+.+-.|- ..+.-+..+--...+.|. ..+.
T Consensus 296 ~~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~Pt---------------~~E~~~~~lwRf~~~lP~~G~i~ 360 (493)
T TIGR03708 296 RKRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAPT---------------DEEKAQHYLWRFWRHIPRRGRIT 360 (493)
T ss_pred CCCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCcC---------------HHHHcCcHHHHHHHhCCCCCeEE
Confidence 367999999999988777889999999999999999986641 112233344444444453 3677
Q ss_pred EEEEcH
Q 020156 190 AVGWSL 195 (330)
Q Consensus 190 lvG~Sl 195 (330)
++=-|.
T Consensus 361 iFdRSw 366 (493)
T TIGR03708 361 IFDRSW 366 (493)
T ss_pred EEcCCc
Confidence 777664
No 323
>PF00101 RuBisCO_small: Ribulose bisphosphate carboxylase, small chain; InterPro: IPR000894 RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) is a bifunctional enzyme that catalyses both the carboxylation and oxygenation of ribulose-1,5-bisphosphate (RuBP) [], thus fixing carbon dioxide as the first step of the Calvin cycle. RuBisCO is the major protein in the stroma of chloroplasts, and in higher plants exists as a complex of 8 large and 8 small subunits. The function of the small subunit is unknown []. While the large subunit is coded for by a single gene, the small subunit is coded for by several different genes, which are distributed in a tissue specific manner. They are transcriptionally regulated by light receptor phytochrome [], which results in RuBisCO being more abundant during the day when it is required. The RuBisCo small subunit consists of a central four-stranded beta-sheet, with two helices packed against it [].; PDB: 1BWV_W 1IWA_P 3AXM_X 1WDD_S 3AXK_T 1IR2_K 1RBL_N 1UZH_J 1RSC_P 1UW9_C ....
Probab=33.84 E-value=1.9e+02 Score=21.28 Aligned_cols=64 Identities=8% Similarity=0.129 Sum_probs=41.2
Q ss_pred HHHHHHHHHhCCcEEEE-EcCCCCCCCC-CC--CCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEc
Q 020156 131 VRHMLLRARSKGWRVVV-FNSRGCGDSP-VT--TPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWS 194 (330)
Q Consensus 131 ~~~~~~~~~~~g~~v~~-~d~rG~G~S~-~~--~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S 194 (330)
+...+..++++||.+.+ +.-..+-.+. -. ........-...+.+.|+..+..+|+.-|=++|+.
T Consensus 16 i~~Qv~~ll~qG~~i~iE~ad~r~~r~~~W~mW~~p~~~~~~~~~Vl~el~~c~~~~p~~yVRlig~D 83 (99)
T PF00101_consen 16 IAKQVRYLLSQGWIIGIEHADPRRFRTSYWQMWKLPMFGCTDPAQVLAELEACLAEHPGEYVRLIGFD 83 (99)
T ss_dssp HHHHHHHHHHTT-EEEEEEESCGGSTSSS-EEESSEBTTBSSHHHHHHHHHHHHHHSTTSEEEEEEEE
T ss_pred HHHHHHhhhhcCceeeEEecCCCCCCCCEeecCCCCCcCCCCHHHHHHHHHHHHHhCCCceEEEEEEc
Confidence 56778889999998844 4333332221 11 12233344567788888888999999989899875
No 324
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=33.78 E-value=2.8e+02 Score=24.25 Aligned_cols=39 Identities=8% Similarity=0.237 Sum_probs=25.6
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcE-EEEEcCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWR-VVVFNSR 151 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~-v~~~d~r 151 (330)
..|.|++++--.+ ..+.|...+...+.+.|+. |-.++.+
T Consensus 27 ~~~rI~~iptAS~-~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 27 EDAIIVIITSASE-EPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCceEEEEeCCCC-ChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 4467888885433 3445667777778888984 5556653
No 325
>PTZ00062 glutaredoxin; Provisional
Probab=33.71 E-value=2.6e+02 Score=23.66 Aligned_cols=81 Identities=19% Similarity=0.245 Sum_probs=55.2
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCC-CcEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPK-AHLYA 190 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~-~~i~l 190 (330)
..|++|+..|........|.+.....|.+.|.....+|.-- + +++++.+..+... +. ..+++
T Consensus 112 ~~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~--------------d--~~~~~~l~~~sg~-~TvPqVfI 174 (204)
T PTZ00062 112 NHKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFE--------------D--PDLREELKVYSNW-PTYPQLYV 174 (204)
T ss_pred cCCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCC--------------C--HHHHHHHHHHhCC-CCCCeEEE
Confidence 67999999998766777788888888888887666666530 1 3445544443221 22 25777
Q ss_pred EEEcHHHHHHHHHHhhcCC
Q 020156 191 VGWSLGANILIRYLGHESH 209 (330)
Q Consensus 191 vG~SlGg~ia~~~a~~~~~ 209 (330)
=|--.||+--+.-+.+.++
T Consensus 175 ~G~~IGG~d~l~~l~~~G~ 193 (204)
T PTZ00062 175 NGELIGGHDIIKELYESNS 193 (204)
T ss_pred CCEEEcChHHHHHHHHcCC
Confidence 7888999888877777665
No 326
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=33.67 E-value=67 Score=29.11 Aligned_cols=18 Identities=22% Similarity=0.311 Sum_probs=16.4
Q ss_pred EEEEEcHHHHHHHHHHhh
Q 020156 189 YAVGWSLGANILIRYLGH 206 (330)
Q Consensus 189 ~lvG~SlGg~ia~~~a~~ 206 (330)
.+.|.|.||.+++.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 799999999999999863
No 327
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=33.65 E-value=80 Score=28.90 Aligned_cols=37 Identities=19% Similarity=0.388 Sum_probs=33.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVF 148 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~ 148 (330)
++|.|+++=|..|.....-+-.++..+.++|+.|+..
T Consensus 137 ~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~Vlla 173 (340)
T COG0552 137 KKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLA 173 (340)
T ss_pred CCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEE
Confidence 6799999999999887777889999999999999875
No 328
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=33.53 E-value=53 Score=29.77 Aligned_cols=29 Identities=17% Similarity=0.157 Sum_probs=21.4
Q ss_pred HHHHHhC-CCCcEEEEEEcHHHHHHHHHHh
Q 020156 177 AHVGSKY-PKAHLYAVGWSLGANILIRYLG 205 (330)
Q Consensus 177 ~~l~~~~-~~~~i~lvG~SlGg~ia~~~a~ 205 (330)
+.+.++. +..+.++.|||+|=+.++..++
T Consensus 75 ~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 75 RVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 3344444 4558899999999998887765
No 329
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=33.40 E-value=87 Score=24.86 Aligned_cols=23 Identities=22% Similarity=0.304 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhCCcEEEEEcCCC
Q 020156 130 YVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 130 ~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
|+..+.+.+.+.|+.+..+|..-
T Consensus 1 y~~~~~~~f~~~g~~v~~l~~~~ 23 (154)
T PF03575_consen 1 YVEKFRKAFRKLGFEVDQLDLSD 23 (154)
T ss_dssp HHHHHHHHHHHCT-EEEECCCTS
T ss_pred CHHHHHHHHHHCCCEEEEEeccC
Confidence 45667777888899888888754
No 330
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=33.26 E-value=51 Score=28.89 Aligned_cols=83 Identities=17% Similarity=0.256 Sum_probs=45.3
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCc-------EEEEEcCCCCCCCCCCC--C---C---ccC-cChHHHHHHHHHHH
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGW-------RVVVFNSRGCGDSPVTT--P---Q---FYS-ASFLGDMQEVVAHV 179 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~-------~v~~~d~rG~G~S~~~~--~---~---~~~-~~~~~D~~~~i~~l 179 (330)
-|++.|- |+....-.+.+...+.++|. +++.+|..|.=..+... + . +.. .....|+.++|+.+
T Consensus 27 riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~~~~~~~~~L~eav~~~ 105 (254)
T cd00762 27 KVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFANPERESGDLEDAVEAA 105 (254)
T ss_pred EEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHcCcccccCCHHHHHHhh
Confidence 3455564 32333333445555554443 79999999853332211 1 0 111 11224677777666
Q ss_pred HHhCCCCcEEEEEEcH-HHHHHHHHHh
Q 020156 180 GSKYPKAHLYAVGWSL-GANILIRYLG 205 (330)
Q Consensus 180 ~~~~~~~~i~lvG~Sl-Gg~ia~~~a~ 205 (330)
+ +-+++|-|- ||.+.-....
T Consensus 106 k------ptvlIG~S~~~g~ft~evv~ 126 (254)
T cd00762 106 K------PDFLIGVSRVGGAFTPEVIR 126 (254)
T ss_pred C------CCEEEEeCCCCCCCCHHHHH
Confidence 5 459999998 8866655543
No 331
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=33.22 E-value=1.8e+02 Score=23.96 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=50.1
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---C--CccC--cChHHHHHHHHHHHHHhCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT---P--QFYS--ASFLGDMQEVVAHVGSKYP 184 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~---~--~~~~--~~~~~D~~~~i~~l~~~~~ 184 (330)
.+..|-++.|..++.. +..++.+.++|-.|+..|+|-.++.+... . -+.. -.-.+|+++++...+.+|+
T Consensus 7 ~kglvalvtggasglg----~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfg 82 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLG----KATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFG 82 (260)
T ss_pred hcCeeEEeecCccccc----HHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence 3556777777544333 55678899999999999999766543110 0 0111 1235799999999888876
Q ss_pred CCcEEEEEEcHH
Q 020156 185 KAHLYAVGWSLG 196 (330)
Q Consensus 185 ~~~i~lvG~SlG 196 (330)
++.+.=.+.|
T Consensus 83 --rld~~vncag 92 (260)
T KOG1199|consen 83 --RLDALVNCAG 92 (260)
T ss_pred --ceeeeeeccc
Confidence 3444434433
No 332
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=33.17 E-value=25 Score=25.96 Aligned_cols=19 Identities=11% Similarity=-0.139 Sum_probs=16.3
Q ss_pred CCcceEEEEecCCcccccc
Q 020156 310 VRIPLLCIQVGCFYHFQRQ 328 (330)
Q Consensus 310 I~~P~Lii~g~~D~~f~~~ 328 (330)
-+.|+|+|+++.|+..|.+
T Consensus 33 ~~~piL~l~~~~Dp~TP~~ 51 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYE 51 (103)
T ss_pred CCCCEEEEecCcCCCCcHH
Confidence 3689999999999988764
No 333
>PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: Succinyl-CoA + L-homoserine = CoA + O-succinyl-L-homoserine This enzyme is consequently essential for the survival of bacteria, plants and fungi. Since they are not found in humans, they make a promising new target for antimicrobial drug development. Homoserine O-succinyltransferase (HST) is a representative from this class and has recently had the key amino acids involved in substrate specificity and catalysis elucidated [].; GO: 0016746 transferase activity, transferring acyl groups, 0019281 L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine, 0005737 cytoplasm; PDB: 2H2W_A 2GHR_A 2VDJ_A.
Probab=32.88 E-value=1.4e+02 Score=26.89 Aligned_cols=60 Identities=10% Similarity=0.194 Sum_probs=43.7
Q ss_pred HHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh
Q 020156 138 ARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 138 ~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~ 206 (330)
...++|+-+++- +.+.....+.-.++.+.+.++++|.+.. ...-+..++||..|+.+---
T Consensus 94 i~~~~~DglIIT-----GAPvE~l~Fe~V~YW~El~~i~dwa~~~----v~stl~iCWgAqAaLy~~yG 153 (298)
T PF04204_consen 94 IKDRKFDGLIIT-----GAPVEQLPFEEVDYWDELTEIFDWAKTH----VTSTLFICWGAQAALYHFYG 153 (298)
T ss_dssp CTTS-EEEEEE--------TTTTS-GGGSTTHHHHHHHHHHHHHH----EEEEEEETHHHHHHHHHHH-
T ss_pred HhhCCCCEEEEe-----CCCcCCCCcccCCcHHHHHHHHHHHHHc----CCcchhhhHHHHHHHHHHcC
Confidence 355678877773 2444444566678889999999999998 88999999999999987643
No 334
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=32.46 E-value=67 Score=28.45 Aligned_cols=32 Identities=13% Similarity=-0.003 Sum_probs=23.3
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhc
Q 020156 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 175 ~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~ 207 (330)
+++.+.+. +-..=.++|.|+|+.++..||...
T Consensus 28 VL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEA-GIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHc-CCCccEEEEECHHHHHHHHHHcCC
Confidence 45555544 222458999999999999999764
No 335
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=32.45 E-value=57 Score=28.78 Aligned_cols=22 Identities=27% Similarity=0.265 Sum_probs=18.3
Q ss_pred CCcEEEEEEcHHHHHHHHHHhh
Q 020156 185 KAHLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 185 ~~~i~lvG~SlGg~ia~~~a~~ 206 (330)
-.+-.++|||+|=+.|+..++.
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCC
Confidence 5588999999999988877754
No 336
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=32.21 E-value=2.4e+02 Score=25.06 Aligned_cols=66 Identities=15% Similarity=0.013 Sum_probs=40.9
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHH
Q 020156 131 VRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGAN 198 (330)
Q Consensus 131 ~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ 198 (330)
.+.+++.+.+.|+.-+.+|--=.+.-...........-..|+.++++|.+++ +..|.+..||-++.
T Consensus 34 ~k~yIDfAa~~G~eYvlvD~GW~~~~~~~~~d~~~~~~~~dl~elv~Ya~~K--gVgi~lw~~~~~~~ 99 (273)
T PF10566_consen 34 QKRYIDFAAEMGIEYVLVDAGWYGWEKDDDFDFTKPIPDFDLPELVDYAKEK--GVGIWLWYHSETGG 99 (273)
T ss_dssp HHHHHHHHHHTT-SEEEEBTTCCGS--TTT--TT-B-TT--HHHHHHHHHHT--T-EEEEEEECCHTT
T ss_pred HHHHHHHHHHcCCCEEEeccccccccccccccccccCCccCHHHHHHHHHHc--CCCEEEEEeCCcch
Confidence 4788999999999999998743321111111122222337999999999998 33699999998833
No 337
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=32.19 E-value=90 Score=29.85 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=32.8
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r 151 (330)
..|.++++-|..|...+.....++..+.++|++|.+++.-
T Consensus 93 ~~p~vI~lvG~~GsGKTTtaakLA~~L~~~g~kV~lV~~D 132 (437)
T PRK00771 93 LKPQTIMLVGLQGSGKTTTAAKLARYFKKKGLKVGLVAAD 132 (437)
T ss_pred CCCeEEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEecCC
Confidence 4577888889999888777788888888899999887763
No 338
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=32.19 E-value=2.5e+02 Score=22.51 Aligned_cols=64 Identities=11% Similarity=0.140 Sum_probs=37.9
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHh
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK 182 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~ 182 (330)
.-+.-.|.+|.....++..+...+.....+++++.. |.-+. .. ......+.+.+..+++.+++.
T Consensus 32 ~~v~n~g~~G~~~~~~l~~l~~~~~~~~~d~v~i~~-G~ND~--~~-~~~~~~~~~~~~~li~~~~~~ 95 (183)
T cd04501 32 KEVINRGINGDTTSQMLVRFYEDVIALKPAVVIIMG-GTNDI--IV-NTSLEMIKDNIRSMVELAEAN 95 (183)
T ss_pred CeEEecCcCCccHHHHHHHHHHHHHhcCCCEEEEEe-ccCcc--cc-CCCHHHHHHHHHHHHHHHHHC
Confidence 345667888776666666665556666778777776 33222 11 112345566777777777553
No 339
>PRK06398 aldose dehydrogenase; Validated
Probab=32.17 E-value=2e+02 Score=24.76 Aligned_cols=65 Identities=18% Similarity=0.206 Sum_probs=36.4
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPK 185 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 185 (330)
.+++-|..++. -..++..+.++|++|++.+...-.......... .-...+++.++++.+.++++.
T Consensus 8 ~vlItGas~gI----G~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~-D~~~~~~i~~~~~~~~~~~~~ 72 (258)
T PRK06398 8 VAIVTGGSQGI----GKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKV-DVSNKEQVIKGIDYVISKYGR 72 (258)
T ss_pred EEEEECCCchH----HHHHHHHHHHCCCeEEEEeCCccccCceEEEEc-cCCCHHHHHHHHHHHHHHcCC
Confidence 45555643332 256778889999999988754211100000011 112346788888888776653
No 340
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=31.98 E-value=1.9e+02 Score=26.38 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=25.2
Q ss_pred CCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q 020156 124 GGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP 157 (330)
Q Consensus 124 g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~ 157 (330)
|+.....+..++..+.++|++|.++ .||+|++.
T Consensus 61 GtGKTP~v~~L~~~l~~~g~~~~il-sRGYg~~~ 93 (325)
T PRK00652 61 GTGKTPVVIALAEQLQARGLKPGVV-SRGYGGKL 93 (325)
T ss_pred CCChHHHHHHHHHHHHHCCCeEEEE-CCCCCCCc
Confidence 4456677788888899999987655 78998754
No 341
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=31.96 E-value=2.6e+02 Score=22.11 Aligned_cols=72 Identities=10% Similarity=0.151 Sum_probs=37.9
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEE
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 192 (330)
.-+.-.|..|.........+...+.....+++++..= . .+.. .......+.+++..+++.++.+ +.++++++
T Consensus 37 ~~v~n~g~~G~~~~~~~~~l~~~~~~~~pd~v~i~~G-~--ND~~-~~~~~~~~~~~l~~li~~~~~~--~~~vil~~ 108 (177)
T cd01822 37 VTVINAGVSGDTTAGGLARLPALLAQHKPDLVILELG-G--NDGL-RGIPPDQTRANLRQMIETAQAR--GAPVLLVG 108 (177)
T ss_pred eEEEecCcCCcccHHHHHHHHHHHHhcCCCEEEEecc-C--cccc-cCCCHHHHHHHHHHHHHHHHHC--CCeEEEEe
Confidence 3445556655444333334444444446677766542 1 1111 1122345667788888888765 34677776
No 342
>PRK06523 short chain dehydrogenase; Provisional
Probab=31.69 E-value=1.9e+02 Score=24.72 Aligned_cols=64 Identities=22% Similarity=0.151 Sum_probs=37.2
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCcc--CcChHHHHHHHHHHHHHhCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFY--SASFLGDMQEVVAHVGSKYP 184 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~--~~~~~~D~~~~i~~l~~~~~ 184 (330)
.+++.|.+++.. ..++..+.++|++|++.+...-...... -... .-...+++..+++.+.+.++
T Consensus 11 ~vlItGas~gIG----~~ia~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (260)
T PRK06523 11 RALVTGGTKGIG----AATVARLLEAGARVVTTARSRPDDLPEG-VEFVAADLTTAEGCAAVARAVLERLG 76 (260)
T ss_pred EEEEECCCCchh----HHHHHHHHHCCCEEEEEeCChhhhcCCc-eeEEecCCCCHHHHHHHHHHHHHHcC
Confidence 567777655443 4677788889999999876422111100 0011 11234677778887777655
No 343
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.
Probab=31.66 E-value=1.8e+02 Score=25.27 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=25.4
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~ 153 (330)
..|.|+++=+ .+. ...++..+...||+|.++|.|-.
T Consensus 99 p~~~L~IfGa----G~v--a~~la~la~~lGf~V~v~D~R~~ 134 (246)
T TIGR02964 99 PAPHVVLFGA----GHV--GRALVRALAPLPCRVTWVDSREA 134 (246)
T ss_pred CCCEEEEECC----cHH--HHHHHHHHhcCCCEEEEEeCCcc
Confidence 4455666622 333 56777788888999999999854
No 344
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=31.58 E-value=88 Score=25.39 Aligned_cols=33 Identities=18% Similarity=0.092 Sum_probs=23.9
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcC
Q 020156 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 175 ~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
+++.+.+. ....=.++|.|.|+.++..++....
T Consensus 18 vl~~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 18 VLRALEEE-GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHC-CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 45555544 2235689999999999999987654
No 345
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=31.41 E-value=73 Score=26.97 Aligned_cols=33 Identities=18% Similarity=0.032 Sum_probs=24.4
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcC
Q 020156 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 175 ~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
+++.+.+.. ...=.++|.|.|+.++..++...+
T Consensus 16 vl~aL~e~g-~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAG-IEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcC-CCCCEEEEECHHHHHHHHHHcCCc
Confidence 455555542 235599999999999999998664
No 346
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=31.12 E-value=3.4e+02 Score=24.82 Aligned_cols=81 Identities=19% Similarity=0.167 Sum_probs=41.6
Q ss_pred EEeCCCCCCCchHHHHHHHHHHHhCC--cEEEEEcC--CCCCCCCCC--------C-CCccCcChHHHHHHHHHHHHHhC
Q 020156 117 ILMPGLTGGSEDSYVRHMLLRARSKG--WRVVVFNS--RGCGDSPVT--------T-PQFYSASFLGDMQEVVAHVGSKY 183 (330)
Q Consensus 117 v~~HG~~g~~~~~~~~~~~~~~~~~g--~~v~~~d~--rG~G~S~~~--------~-~~~~~~~~~~D~~~~i~~l~~~~ 183 (330)
|+++|+ | |....+..++..+.... +.|+++|- |++.-.+.. . .........+-+..+++++...-
T Consensus 57 lL~YG~-G-SKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~ 134 (326)
T PF04084_consen 57 LLFYGY-G-SKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRP 134 (326)
T ss_pred EEEEec-C-hHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccC
Confidence 556666 2 33345566666655543 55666652 222110000 0 01111233445555666666653
Q ss_pred CCCcEEEEEEcHHHHH
Q 020156 184 PKAHLYAVGWSLGANI 199 (330)
Q Consensus 184 ~~~~i~lvG~SlGg~i 199 (330)
...+++++=|++=|..
T Consensus 135 ~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 135 SPPPLYLVIHNIDGPS 150 (326)
T ss_pred CCCceEEEEECCCChh
Confidence 3569999999987665
No 347
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=31.09 E-value=1.7e+02 Score=25.56 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=28.4
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
=++++|-.|+..++.++.+...+..+|.+++-++-
T Consensus 54 nvLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k 88 (249)
T PF05673_consen 54 NVLLWGARGTGKSSLVKALLNEYADQGLRLIEVSK 88 (249)
T ss_pred ceEEecCCCCCHHHHHHHHHHHHhhcCceEEEECH
Confidence 45668988888888888888888899988887754
No 348
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=30.93 E-value=97 Score=24.77 Aligned_cols=34 Identities=15% Similarity=0.285 Sum_probs=23.1
Q ss_pred EeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC
Q 020156 118 LMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (330)
Q Consensus 118 ~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r 151 (330)
+..+-+|...+.....++..+.++|++|+++|.=
T Consensus 4 v~~~kgG~GKtt~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 4 VTSGKGGVGKTTTTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred EeeCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3333334444445667888888999999999763
No 349
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=30.80 E-value=1.1e+02 Score=24.57 Aligned_cols=26 Identities=12% Similarity=0.295 Sum_probs=18.6
Q ss_pred cChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 166 ASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 166 ~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
..+.+.+..+++.+++..++.+++++
T Consensus 85 ~~~~~~l~~~v~~~~~~~~~~~ii~~ 110 (191)
T cd01834 85 EKFKTNLRRLIDRLKNKESAPRIVLV 110 (191)
T ss_pred HHHHHHHHHHHHHHHcccCCCcEEEE
Confidence 45677888888888765566666665
No 350
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=30.77 E-value=1.7e+02 Score=26.36 Aligned_cols=34 Identities=29% Similarity=0.466 Sum_probs=26.9
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~ 153 (330)
+-++-|.+|... .| +++.|+++||.|..+-.|-.
T Consensus 4 ~ALITGITGQDG-sY---La~lLLekGY~VhGi~Rrss 37 (345)
T COG1089 4 VALITGITGQDG-SY---LAELLLEKGYEVHGIKRRSS 37 (345)
T ss_pred eEEEecccCCch-HH---HHHHHHhcCcEEEEEeeccc
Confidence 567889988554 44 67779999999999998843
No 351
>PRK10867 signal recognition particle protein; Provisional
Probab=30.65 E-value=96 Score=29.63 Aligned_cols=39 Identities=21% Similarity=0.400 Sum_probs=30.9
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhC-CcEEEEEcC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSK-GWRVVVFNS 150 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~-g~~v~~~d~ 150 (330)
..|.++++-|..|...+.....++..+.++ |..|.++|.
T Consensus 98 ~~p~vI~~vG~~GsGKTTtaakLA~~l~~~~G~kV~lV~~ 137 (433)
T PRK10867 98 KPPTVIMMVGLQGAGKTTTAGKLAKYLKKKKKKKVLLVAA 137 (433)
T ss_pred CCCEEEEEECCCCCcHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 457888888999988877778888888887 887766554
No 352
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=30.58 E-value=83 Score=27.96 Aligned_cols=23 Identities=17% Similarity=0.128 Sum_probs=18.7
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhh
Q 020156 184 PKAHLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 184 ~~~~i~lvG~SlGg~ia~~~a~~ 206 (330)
+..+-.++|||+|=..|+..++-
T Consensus 74 g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 74 LPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred CCCCcEEeecCHHHHHHHHHhCC
Confidence 44588999999999988877653
No 353
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=30.57 E-value=75 Score=27.14 Aligned_cols=35 Identities=6% Similarity=0.302 Sum_probs=25.9
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEc
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d 149 (330)
..||++|...... ...+..++..+.++||+++.++
T Consensus 187 g~IiLlHd~~~~t-~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDN-AEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCH-HHHHHHHHHHHHHCCCEEEEhH
Confidence 4689999753322 2356888999999999998764
No 354
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=30.55 E-value=58 Score=28.07 Aligned_cols=34 Identities=15% Similarity=-0.106 Sum_probs=23.8
Q ss_pred HHHHHHHhC-CCCcEEEEEEcHHHHHHHHHHhhcC
Q 020156 175 VVAHVGSKY-PKAHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 175 ~i~~l~~~~-~~~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
+++.+.++. ....-.++|-|.|+.++..|+....
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 556665542 1113479999999999999997654
No 355
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=30.38 E-value=1.5e+02 Score=25.22 Aligned_cols=65 Identities=9% Similarity=0.113 Sum_probs=37.0
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCC---------CCCCCCcc--CcChHHHHHHHHHHHHHhCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS---------PVTTPQFY--SASFLGDMQEVVAHVGSKYP 184 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S---------~~~~~~~~--~~~~~~D~~~~i~~l~~~~~ 184 (330)
.+++-|.+|.. -..++..|.++|++|++++.+..... ........ .-...+++..+++.+.+.++
T Consensus 4 ~vlItG~sg~i----G~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 4 VALVTGGRRGI----GLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred EEEEeCCCchH----HHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 45565644432 35678888899999999987642110 00000111 11234677788888877765
No 356
>PRK06114 short chain dehydrogenase; Provisional
Probab=30.36 E-value=2e+02 Score=24.53 Aligned_cols=65 Identities=14% Similarity=0.169 Sum_probs=36.1
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCC---------CCCCCcc--CcChHHHHHHHHHHHHHhCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP---------VTTPQFY--SASFLGDMQEVVAHVGSKYP 184 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~---------~~~~~~~--~~~~~~D~~~~i~~l~~~~~ 184 (330)
++++-|.+++. -..++..+.++|++|++.+.+...... ....... .....+++.++++.+...++
T Consensus 10 ~~lVtG~s~gI----G~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 10 VAFVTGAGSGI----GQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred EEEEECCCchH----HHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 44555654432 356788889999999998865321100 0000000 11234577788888777655
No 357
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=30.36 E-value=66 Score=28.53 Aligned_cols=23 Identities=26% Similarity=0.086 Sum_probs=18.7
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhh
Q 020156 184 PKAHLYAVGWSLGANILIRYLGH 206 (330)
Q Consensus 184 ~~~~i~lvG~SlGg~ia~~~a~~ 206 (330)
+-.+-.++|||+|-+.|+..++.
T Consensus 80 Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 80 GVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred CCcccEEEecCHHHHHHHHHhCC
Confidence 44578999999999999877754
No 358
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=30.28 E-value=1.1e+02 Score=21.87 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=21.1
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
++++||+|+.. ..+ ...+..|.+.||. +.++.|
T Consensus 61 ~~~ivv~C~~G---~rs---~~aa~~L~~~G~~--~~~l~G 93 (100)
T cd01523 61 DQEVTVICAKE---GSS---QFVAELLAERGYD--VDYLAG 93 (100)
T ss_pred CCeEEEEcCCC---CcH---HHHHHHHHHcCce--eEEeCC
Confidence 67888888753 222 3455677889998 455554
No 359
>PF05707 Zot: Zonular occludens toxin (Zot); InterPro: IPR008900 This entry consists of bacterial and viral proteins which are very similar to the Zonular occludens toxin (Zot). Zot is elaborated by bacteriophage present in toxigenic strains of Vibrio cholerae. Zot is a single polypeptide chain of 44.8 kDa, with the ability to reversibly alter intestinal epithelial tight junctions, allowing the passage of macromolecules through mucosal barriers.; PDB: 2R2A_B.
Probab=30.25 E-value=63 Score=26.80 Aligned_cols=39 Identities=26% Similarity=0.418 Sum_probs=20.6
Q ss_pred EEEEeCCCCCCCchHHHHHH-HHHHHhCCcEEEEEcCCCCC
Q 020156 115 VLILMPGLTGGSEDSYVRHM-LLRARSKGWRVVVFNSRGCG 154 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~-~~~~~~~g~~v~~~d~rG~G 154 (330)
.|.++.|..|+..+.+.-.. +..+.++|..|++ |.+|.-
T Consensus 1 mI~~~~G~pGsGKS~~av~~~i~~~l~~gr~V~t-ni~gL~ 40 (193)
T PF05707_consen 1 MIYLITGKPGSGKSYYAVSYVIIPALKKGRPVYT-NIPGLN 40 (193)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHH-GGGS---EEE---TTB-
T ss_pred CEEEEEcCCCCcHhHHHHHHHHHHHHhCCCEEEE-ccCCcc
Confidence 36788999998776544444 5566778888888 988764
No 360
>PF09757 Arb2: Arb2 domain; InterPro: IPR019154 The fission yeast Argonaute siRNA chaperone (ARC) complex contains the Argonaute protein Ago1 and two previously uncharacterised proteins, Arb1 and Arb2, both of which are required for histone H3 Lys9 (H3-K9) methylation, heterochromatin assembly and siRNA generation []. This entry represents a region found in both Arb2 and the Hda1 protein. ; PDB: 2VQV_A 2VQO_A 2VQJ_A 2VQQ_B 2VQM_A 2VQW_G.
Probab=30.05 E-value=17 Score=29.90 Aligned_cols=41 Identities=17% Similarity=0.268 Sum_probs=0.0
Q ss_pred CCcEEEEeCCCCC----------CCchHHHHH-HHHHHHhCCcEEEEEcCCC
Q 020156 112 DSPVLILMPGLTG----------GSEDSYVRH-MLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 112 ~~p~vv~~HG~~g----------~~~~~~~~~-~~~~~~~~g~~v~~~d~rG 152 (330)
....||++||.+. +....-... +++.+.++||.|+.+|..-
T Consensus 98 ~~~llViih~~g~~wa~~~~~~~~l~~gs~~~~~i~~A~~~~~gVI~~N~~~ 149 (178)
T PF09757_consen 98 AKKLLVIIHGSGVIWARRLIINGGLDSGSQIPQYIKWALKEGYGVIDLNPNQ 149 (178)
T ss_dssp ----------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4567888888542 010011223 6677788999999998853
No 361
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=29.86 E-value=1.9e+02 Score=25.78 Aligned_cols=64 Identities=16% Similarity=0.234 Sum_probs=38.5
Q ss_pred EeCCCCCCCchHHHHHHHHHHHhCCcEEEEE------cCCCCCCCCCCCCCccCcChHHHHHHHHHHHHH--hCCCCcEE
Q 020156 118 LMPGLTGGSEDSYVRHMLLRARSKGWRVVVF------NSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGS--KYPKAHLY 189 (330)
Q Consensus 118 ~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~------d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~--~~~~~~i~ 189 (330)
.+||..|++.. +..+...|++|+++ |++|+|...+.. .-.+++.++++.+.. ....-..+
T Consensus 10 Vv~G~vGn~AA------~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v------~~~e~l~~~l~~l~~~~~~~~~dav 77 (281)
T COG2240 10 VVYGSVGNSAA------IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIV------MPPEQLADLLNGLEAIDKLGECDAV 77 (281)
T ss_pred EeecccccHhH------HHHHHHcCCceeeeceEEecCCCCCCCCCCcC------CCHHHHHHHHHHHHhcccccccCEE
Confidence 46787775543 23567789988765 567888754321 223666666766665 22333667
Q ss_pred EEEE
Q 020156 190 AVGW 193 (330)
Q Consensus 190 lvG~ 193 (330)
+.|+
T Consensus 78 ltGY 81 (281)
T COG2240 78 LTGY 81 (281)
T ss_pred EEcc
Confidence 7776
No 362
>PRK07856 short chain dehydrogenase; Provisional
Probab=29.84 E-value=1.6e+02 Score=25.06 Aligned_cols=75 Identities=17% Similarity=0.129 Sum_probs=40.8
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCcc--CcChHHHHHHHHHHHHHhCCCCcEEEEEE
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFY--SASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~--~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 193 (330)
.+++-|.+++.. ..++..|.++|++|++.+...-........... .....+++.++++.+.+.++ ++.++=|
T Consensus 8 ~~lItGas~gIG----~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~vi~ 81 (252)
T PRK07856 8 VVLVTGGTRGIG----AGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHG--RLDVLVN 81 (252)
T ss_pred EEEEeCCCchHH----HHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEEE
Confidence 455666544332 567788889999999987653210000000111 11224677788888777655 3444444
Q ss_pred cHH
Q 020156 194 SLG 196 (330)
Q Consensus 194 SlG 196 (330)
+.|
T Consensus 82 ~ag 84 (252)
T PRK07856 82 NAG 84 (252)
T ss_pred CCC
Confidence 443
No 363
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=29.81 E-value=3e+02 Score=24.16 Aligned_cols=68 Identities=12% Similarity=0.250 Sum_probs=40.9
Q ss_pred HHHhhhhcCCCCCCcceEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEc
Q 020156 70 TIFAAFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 70 t~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d 149 (330)
..+..+........-+|..+.++.|.++.+. .-+|=++--+..+.+. ..-++.+++.||.|+..-
T Consensus 16 s~~~eFi~~q~s~~~rrIVlVTSGGTtVPLE------------~ntVRFiDNFSaGtRG---AaSAE~Fl~agYaVIFl~ 80 (302)
T KOG2728|consen 16 SLIEEFIKLQASLQGRRIVLVTSGGTTVPLE------------QNTVRFIDNFSAGTRG---AASAEYFLAAGYAVIFLY 80 (302)
T ss_pred HHHHHHHHHHhhccCceEEEEecCCeEeecc------------cCceEeeeccCcCCcc---chhHHHHHhCCceEEEEe
Confidence 3355555444344446777888877776653 2346666665544432 234566788999998776
Q ss_pred CCC
Q 020156 150 SRG 152 (330)
Q Consensus 150 ~rG 152 (330)
..+
T Consensus 81 R~~ 83 (302)
T KOG2728|consen 81 RER 83 (302)
T ss_pred ecc
Confidence 543
No 364
>TIGR03586 PseI pseudaminic acid synthase.
Probab=29.70 E-value=3.1e+02 Score=25.11 Aligned_cols=78 Identities=13% Similarity=0.261 Sum_probs=48.1
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCc-EEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEE
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGW-RVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~-~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 191 (330)
+.+|++=-|+ ++..+ +...+..+.+.|. +++... +-|..+.+.. .-|+ .+|..+++.++ .+|.+.
T Consensus 134 gkPvilstG~-~t~~E--i~~Av~~i~~~g~~~i~Llh----C~s~YP~~~~-----~~nL-~~i~~lk~~f~-~pVG~S 199 (327)
T TIGR03586 134 GKPIIMSTGI-ATLEE--IQEAVEACREAGCKDLVLLK----CTSSYPAPLE-----DANL-RTIPDLAERFN-VPVGLS 199 (327)
T ss_pred CCcEEEECCC-CCHHH--HHHHHHHHHHCCCCcEEEEe----cCCCCCCCcc-----cCCH-HHHHHHHHHhC-CCEEee
Confidence 4457788887 34444 6777888888887 565554 2333332221 1122 46778888874 589899
Q ss_pred EEcHHHHHHHHHH
Q 020156 192 GWSLGANILIRYL 204 (330)
Q Consensus 192 G~SlGg~ia~~~a 204 (330)
.|+.|-.+++...
T Consensus 200 DHt~G~~~~~aAv 212 (327)
T TIGR03586 200 DHTLGILAPVAAV 212 (327)
T ss_pred CCCCchHHHHHHH
Confidence 9999965554444
No 365
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=29.64 E-value=1.9e+02 Score=26.30 Aligned_cols=69 Identities=19% Similarity=0.277 Sum_probs=41.1
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCC---CCC-CCCccC----cChHHHHHHHHHHHHHhCCCCc
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS---PVT-TPQFYS----ASFLGDMQEVVAHVGSKYPKAH 187 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S---~~~-~~~~~~----~~~~~D~~~~i~~l~~~~~~~~ 187 (330)
.|+|-| .++.+-+.++..+.++||+|++=-.-.-|.. ... ++++.. -.-.+.+.++.+++++..++..
T Consensus 31 ~VlITG----CDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 31 AVLITG----CDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred EEEEec----CCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 666766 3446678899999999999987433222210 000 222111 1224678888999888766544
Q ss_pred E
Q 020156 188 L 188 (330)
Q Consensus 188 i 188 (330)
+
T Consensus 107 L 107 (322)
T KOG1610|consen 107 L 107 (322)
T ss_pred c
Confidence 3
No 366
>COG2840 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.63 E-value=67 Score=26.67 Aligned_cols=42 Identities=29% Similarity=0.363 Sum_probs=26.1
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPV 158 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~ 158 (330)
=|=+||++-.-...-+..++..+.++|.+|+.+=. |.|.|.+
T Consensus 98 ~LDLHG~tq~eAr~~L~~Fi~~a~~~~~rcv~Vih-GkG~s~g 139 (184)
T COG2840 98 RLDLHGLTQEEARQELGAFIARARAEGLRCVLVIH-GKGRSKG 139 (184)
T ss_pred eeeccCCCHHHHHHHHHHHHHHHHHhCCcEEEEEe-CCCcCCC
Confidence 45589997543334456667777778877665543 5555544
No 367
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=29.57 E-value=2.1e+02 Score=23.95 Aligned_cols=89 Identities=17% Similarity=0.228 Sum_probs=45.4
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC-------ccCcCh----HHHHHH--HHHHH
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ-------FYSASF----LGDMQE--VVAHV 179 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~-------~~~~~~----~~D~~~--~i~~l 179 (330)
.+.|++++--.+. .+.+...+.+.+.+.|..+..+...-....+..... +...+. .+-++. .++.+
T Consensus 29 ~~~i~~iptA~~~-~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~i 107 (210)
T cd03129 29 GARVLFIPTASGD-RDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDAI 107 (210)
T ss_pred CCeEEEEeCCCCC-hHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHHH
Confidence 4557777654333 445566777777888988776654322111100000 000111 111111 22233
Q ss_pred HHhCCCCcEEEEEEcHHHHHHHHH
Q 020156 180 GSKYPKAHLYAVGWSLGANILIRY 203 (330)
Q Consensus 180 ~~~~~~~~i~lvG~SlGg~ia~~~ 203 (330)
.+.+. .-..++|.|.|+++....
T Consensus 108 ~~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 108 LKRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHHH-cCCeEEEcCHHHHHhhhc
Confidence 33322 257999999999999886
No 368
>PRK07053 glutamine amidotransferase; Provisional
Probab=29.33 E-value=3.7e+02 Score=23.12 Aligned_cols=83 Identities=18% Similarity=0.184 Sum_probs=47.8
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCC-C------------CCCCCccC---cChHHHHHHHH
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS-P------------VTTPQFYS---ASFLGDMQEVV 176 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S-~------------~~~~~~~~---~~~~~D~~~~i 176 (330)
++++|+-|--..+. ..+...+.+.|+.+-+++.-. +.. . +.....+. ..|..+..+++
T Consensus 3 ~~ilviqh~~~e~~-----g~i~~~L~~~g~~~~v~~~~~-~~~~~~~~~~~d~lii~Ggp~~~~d~~~~p~~~~~~~~i 76 (234)
T PRK07053 3 KTAVAIRHVAFEDL-----GSFEQVLGARGYRVRYVDVGV-DDLETLDALEPDLLVVLGGPIGVYDDELYPFLAPEIALL 76 (234)
T ss_pred ceEEEEECCCCCCC-----hHHHHHHHHCCCeEEEEecCC-CccCCCCccCCCEEEECCCCCCCCCCCcCCcHHHHHHHH
Confidence 35678888754433 335666778888776665421 111 0 00001111 23556666666
Q ss_pred HHHHHhCCCCcEEEEEEcHHHHHHHHHHh
Q 020156 177 AHVGSKYPKAHLYAVGWSLGANILIRYLG 205 (330)
Q Consensus 177 ~~l~~~~~~~~i~lvG~SlGg~ia~~~a~ 205 (330)
+.+... .+=++|.++|..+...+++
T Consensus 77 ~~~~~~----~~PvlGIC~G~Qlla~alG 101 (234)
T PRK07053 77 RQRLAA----GLPTLGICLGAQLIARALG 101 (234)
T ss_pred HHHHHC----CCCEEEECccHHHHHHHcC
Confidence 655544 4568999999999888774
No 369
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=29.30 E-value=96 Score=27.02 Aligned_cols=34 Identities=21% Similarity=0.019 Sum_probs=23.0
Q ss_pred HHHHHHHhCCC-CcEEEEEEcHHHHHHHHHHhhcC
Q 020156 175 VVAHVGSKYPK-AHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 175 ~i~~l~~~~~~-~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
+++.+.++.+. ..-.+.|-|.|+.++..++...+
T Consensus 18 Vl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 18 VAVCLKKYAPHLLLNKISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCCc
Confidence 45555555321 11249999999999999987654
No 370
>CHL00175 minD septum-site determining protein; Validated
Probab=29.20 E-value=1.4e+02 Score=26.35 Aligned_cols=39 Identities=15% Similarity=0.372 Sum_probs=28.0
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r 151 (330)
..++.++.|-+|...+.....++..+.+.|++|+++|.=
T Consensus 15 ~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 15 SRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred ceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 345666666655555555667788888899999999874
No 371
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=29.12 E-value=1e+02 Score=24.87 Aligned_cols=32 Identities=19% Similarity=0.005 Sum_probs=22.8
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhc
Q 020156 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 175 ~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~ 207 (330)
++++|.++. ...=.++|.|.|+.++..++...
T Consensus 18 vl~~L~~~~-~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEEAG-IPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHcC-CCeeEEEEECHHHHHHHHHHcCC
Confidence 455555442 22458999999999999998644
No 372
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=28.98 E-value=1.2e+02 Score=28.85 Aligned_cols=39 Identities=23% Similarity=0.469 Sum_probs=30.6
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHH-hCCcEEEEEcC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRAR-SKGWRVVVFNS 150 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~-~~g~~v~~~d~ 150 (330)
.+|.++++-|..|...+.....++..+. ++|++|.++|.
T Consensus 97 ~~p~vi~~vG~~GsGKTTtaakLA~~l~~~~g~kV~lV~~ 136 (428)
T TIGR00959 97 KPPTVILMVGLQGSGKTTTCGKLAYYLKKKQGKKVLLVAC 136 (428)
T ss_pred CCCEEEEEECCCCCcHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 5688999999999888777778887775 57888866655
No 373
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=28.82 E-value=1.1e+02 Score=26.10 Aligned_cols=40 Identities=10% Similarity=0.076 Sum_probs=27.5
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCC
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G 154 (330)
++.+..+=+|...+...-.++..+.++|++|+++|.=..|
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 4445554444445555667788888899999999986544
No 374
>KOG0635 consensus Adenosine 5'-phosphosulfate kinase [Inorganic ion transport and metabolism]
Probab=28.72 E-value=1.5e+02 Score=24.01 Aligned_cols=39 Identities=13% Similarity=0.279 Sum_probs=30.6
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
.+..+|++.|+.|+..+...=.+.+.|.++|--.+..|-
T Consensus 29 qkGcviWiTGLSgSGKStlACaL~q~L~qrgkl~Y~LDG 67 (207)
T KOG0635|consen 29 QKGCVIWITGLSGSGKSTLACALSQALLQRGKLTYILDG 67 (207)
T ss_pred CCCcEEEEeccCCCCchhHHHHHHHHHHhcCceEEEecC
Confidence 567899999999877665545566778899988888874
No 375
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=28.19 E-value=3.5e+02 Score=24.17 Aligned_cols=26 Identities=19% Similarity=0.409 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhCCcE--EEEEcCCCCCCC
Q 020156 130 YVRHMLLRARSKGWR--VVVFNSRGCGDS 156 (330)
Q Consensus 130 ~~~~~~~~~~~~g~~--v~~~d~rG~G~S 156 (330)
|+...++.+.+.|.. =+++|. |.|.+
T Consensus 164 ~l~~~i~~a~~~GI~~~~IilDP-GiGF~ 191 (282)
T PRK11613 164 YFIEQIARCEAAGIAKEKLLLDP-GFGFG 191 (282)
T ss_pred HHHHHHHHHHHcCCChhhEEEeC-CCCcC
Confidence 445666778889986 788888 66643
No 376
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=28.10 E-value=1.2e+02 Score=20.75 Aligned_cols=34 Identities=29% Similarity=0.405 Sum_probs=20.3
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVF 148 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~ 148 (330)
..|.++++||......+ ......+.++|+.++.+
T Consensus 30 ~~~~~~lvhGga~~GaD---~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 30 RHPDMVLVHGGAPKGAD---RIAARWARERGVPVIRF 63 (71)
T ss_pred hCCCEEEEECCCCCCHH---HHHHHHHHHCCCeeEEe
Confidence 34778899996511222 22334456778877765
No 377
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=28.06 E-value=37 Score=29.88 Aligned_cols=21 Identities=10% Similarity=0.135 Sum_probs=17.3
Q ss_pred CCC-CcceEEEEecCCcccccc
Q 020156 308 KHV-RIPLLCIQVGCFYHFQRQ 328 (330)
Q Consensus 308 ~~I-~~P~Lii~g~~D~~f~~~ 328 (330)
.++ ++|+++|.|++|..+|.+
T Consensus 207 ~~~~~vP~l~I~g~~D~~ip~~ 228 (273)
T PLN02211 207 GDIDKVPRVYIKTLHDHVVKPE 228 (273)
T ss_pred cccCccceEEEEeCCCCCCCHH
Confidence 345 789999999999988753
No 378
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=28.02 E-value=44 Score=27.60 Aligned_cols=36 Identities=14% Similarity=0.298 Sum_probs=23.9
Q ss_pred cEEEEeCCCCCCCc-hHHHHHHHHHHHhCCcEEEEEc
Q 020156 114 PVLILMPGLTGGSE-DSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 114 p~vv~~HG~~g~~~-~~~~~~~~~~~~~~g~~v~~~d 149 (330)
..||++|-...... ...+..++..+.++||+.+.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 34899994211111 2245778889999999998764
No 379
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=28.01 E-value=1e+02 Score=29.04 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=43.6
Q ss_pred CchHHHHHHH-HHHHhCCcEEEEEcCCCCCCCCCCCCCcc---CcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHH
Q 020156 126 SEDSYVRHML-LRARSKGWRVVVFNSRGCGDSPVTTPQFY---SASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILI 201 (330)
Q Consensus 126 ~~~~~~~~~~-~~~~~~g~~v~~~d~rG~G~S~~~~~~~~---~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~ 201 (330)
++..|+..+. ..+++.|..++++.|.|- ....+.+. ....-.|+...+++|..+++...+-+-..|.|...+.
T Consensus 200 dw~~Wi~al~~a~lla~g~~~va~TY~G~---~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~ 276 (398)
T PRK13656 200 DWELWIDALDEAGVLAEGAKTVAYSYIGP---ELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQ 276 (398)
T ss_pred hHHHHHHHHHhcccccCCcEEEEEecCCc---ceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccch
Confidence 4443433332 234668999999999873 33444442 2333468888888888776544455555566654443
No 380
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=27.96 E-value=1.8e+02 Score=24.67 Aligned_cols=64 Identities=14% Similarity=0.117 Sum_probs=34.8
Q ss_pred EEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc-cCcChHHHHHHHHHHHHHhCC
Q 020156 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQF-YSASFLGDMQEVVAHVGSKYP 184 (330)
Q Consensus 117 v~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~-~~~~~~~D~~~~i~~l~~~~~ 184 (330)
+++-|.+++. -..++..+.++|++|++.+..-........... ......+++.++++.+..+++
T Consensus 11 vlItGas~~i----G~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK08220 11 VWVTGAAQGI----GYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETG 75 (252)
T ss_pred EEEeCCCchH----HHHHHHHHHHCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4455543332 256777888999999999865311000000000 011224577777877776655
No 381
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=27.90 E-value=91 Score=27.28 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC
Q 020156 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESH 209 (330)
Q Consensus 175 ~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~ 209 (330)
+++.+.+..-...=.++|.|.||.++..++.....
T Consensus 16 vl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 16 VLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 45555554221133899999999999999876654
No 382
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=27.84 E-value=72 Score=31.39 Aligned_cols=80 Identities=19% Similarity=0.181 Sum_probs=43.4
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCc-------EEEEEcCCCCCCCCCCC---C-C--ccCc---Ch---HHHHHHHH
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGW-------RVVVFNSRGCGDSPVTT---P-Q--FYSA---SF---LGDMQEVV 176 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~-------~v~~~d~rG~G~S~~~~---~-~--~~~~---~~---~~D~~~~i 176 (330)
-|++-|. |+....-.+.+...+.+.|. +++.+|..|.=..+... + + +-.. .. ..++.++|
T Consensus 299 riv~~GA-GsAgiGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~~~~~~L~e~v 377 (559)
T PTZ00317 299 RIVFFGA-GSAAIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTDISAEDSSLKTLEDVV 377 (559)
T ss_pred EEEEECC-CHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccccccccccCCCHHHHH
Confidence 4455564 33333334555566667787 89999999864332211 0 0 0000 00 23555666
Q ss_pred HHHHHhCCCCcEEEEEEcH-HHHHHHH
Q 020156 177 AHVGSKYPKAHLYAVGWSL-GANILIR 202 (330)
Q Consensus 177 ~~l~~~~~~~~i~lvG~Sl-Gg~ia~~ 202 (330)
+.++ |-+++|-|- ||.+.-.
T Consensus 378 ~~~K------PtvLIG~S~~~g~Ft~e 398 (559)
T PTZ00317 378 RFVK------PTALLGLSGVGGVFTEE 398 (559)
T ss_pred hccC------CCEEEEecCCCCCCCHH
Confidence 5544 569999996 6644443
No 383
>PRK07069 short chain dehydrogenase; Validated
Probab=27.84 E-value=1.8e+02 Score=24.59 Aligned_cols=31 Identities=23% Similarity=0.407 Sum_probs=22.5
Q ss_pred EEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC
Q 020156 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (330)
Q Consensus 117 v~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r 151 (330)
+++.|.+++.. ..++..+.++|++|++.+..
T Consensus 2 ilVtG~~~~iG----~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 2 AFITGAAGGLG----RAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred EEEECCCChHH----HHHHHHHHHCCCEEEEEeCC
Confidence 56677654433 56778888999999998764
No 384
>PRK09739 hypothetical protein; Provisional
Probab=27.67 E-value=3.5e+02 Score=22.35 Aligned_cols=67 Identities=15% Similarity=0.243 Sum_probs=35.0
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC----cc--CcChHHHHHHHHHHHHHh
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ----FY--SASFLGDMQEVVAHVGSK 182 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~----~~--~~~~~~D~~~~i~~l~~~ 182 (330)
+|..|.-.++........+++.+.+.|..+..+|+....-.+..... .. .....+|+.+.++.+...
T Consensus 8 iI~~sp~~~s~s~~l~~~~~~~~~~~g~~v~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A 80 (199)
T PRK09739 8 LVWAHPRHDSLTAKVAEAIHQRAQERGHQVEELDLYRSGFDPVLTPEDEPDWKNPDKRYSPEVHQLYSELLEH 80 (199)
T ss_pred EEEcCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEhhhhCCCCCCCHHHhhhhcccCCCCCHHHHHHHHHHHhC
Confidence 34445443333333445667777778999999998654322211100 00 011235667777776654
No 385
>PRK09435 membrane ATPase/protein kinase; Provisional
Probab=27.64 E-value=1.4e+02 Score=27.47 Aligned_cols=39 Identities=15% Similarity=0.380 Sum_probs=31.7
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEE--EcC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVV--FNS 150 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~--~d~ 150 (330)
+++.+|-+.|..|...+.+...++..+.++|++|.+ .|.
T Consensus 54 ~~~~~igi~G~~GaGKSTl~~~l~~~l~~~g~~v~vi~~Dp 94 (332)
T PRK09435 54 GNALRIGITGVPGVGKSTFIEALGMHLIEQGHKVAVLAVDP 94 (332)
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 567899999999988888888888888888877654 554
No 386
>PRK14974 cell division protein FtsY; Provisional
Probab=27.61 E-value=3.3e+02 Score=25.04 Aligned_cols=74 Identities=18% Similarity=0.318 Sum_probs=41.3
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCC
Q 020156 133 HMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCP 212 (330)
Q Consensus 133 ~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~ 212 (330)
..+..+..+|++++.+|-.|....+ ....+.+..+++.+. |. .+++|.-+.-|.-+..-+..+.....
T Consensus 213 ~ai~~~~~~~~DvVLIDTaGr~~~~--------~~lm~eL~~i~~~~~---pd-~~iLVl~a~~g~d~~~~a~~f~~~~~ 280 (336)
T PRK14974 213 DAIEHAKARGIDVVLIDTAGRMHTD--------ANLMDELKKIVRVTK---PD-LVIFVGDALAGNDAVEQAREFNEAVG 280 (336)
T ss_pred HHHHHHHhCCCCEEEEECCCccCCc--------HHHHHHHHHHHHhhC---Cc-eEEEeeccccchhHHHHHHHHHhcCC
Confidence 3344456678999999999765422 233344444433332 33 45666666666666665555443323
Q ss_pred cceEEE
Q 020156 213 LSGAVS 218 (330)
Q Consensus 213 i~~~v~ 218 (330)
++++|+
T Consensus 281 ~~giIl 286 (336)
T PRK14974 281 IDGVIL 286 (336)
T ss_pred CCEEEE
Confidence 656554
No 387
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=27.50 E-value=2e+02 Score=26.53 Aligned_cols=26 Identities=31% Similarity=0.493 Sum_probs=22.8
Q ss_pred HHHHHHHHHhCCcEEEE-EcCCCCCCC
Q 020156 131 VRHMLLRARSKGWRVVV-FNSRGCGDS 156 (330)
Q Consensus 131 ~~~~~~~~~~~g~~v~~-~d~rG~G~S 156 (330)
++.+++.+.++|.+||- +|.|||-.+
T Consensus 72 i~eiv~yA~~rgI~vIPEID~PGH~~a 98 (348)
T cd06562 72 VKEIVEYARLRGIRVIPEIDTPGHTGS 98 (348)
T ss_pred HHHHHHHHHHcCCEEEEeccCchhhHH
Confidence 68899999999999876 999999765
No 388
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=27.23 E-value=98 Score=22.92 Aligned_cols=32 Identities=19% Similarity=0.533 Sum_probs=23.1
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
+|++-|.+|+..+.+...+++.+ |+.++..|-
T Consensus 1 vI~I~G~~gsGKST~a~~La~~~---~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKSTLAKELAERL---GFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH---TCEEEEEHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHH---CCeEEEecc
Confidence 57889998877765544444333 899999988
No 389
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=27.17 E-value=3e+02 Score=22.05 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=19.7
Q ss_pred ChHHHHHHHHHHHHHhCCCCcEEEEE
Q 020156 167 SFLGDMQEVVAHVGSKYPKAHLYAVG 192 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~~~~~~i~lvG 192 (330)
.+.+++..+++.++..+|+.++++++
T Consensus 75 ~~~~~~~~~i~~i~~~~p~~~iil~~ 100 (177)
T cd01844 75 MVRERLGPLVKGLRETHPDTPILLVS 100 (177)
T ss_pred HHHHHHHHHHHHHHHHCcCCCEEEEe
Confidence 56678888888888877776777665
No 390
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=27.05 E-value=84 Score=27.20 Aligned_cols=34 Identities=21% Similarity=0.520 Sum_probs=27.5
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEc
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d 149 (330)
+|++-|.+|+..+...+.+...+...|+.++.++
T Consensus 1 LIvl~G~pGSGKST~a~~La~~l~~~~~~v~~i~ 34 (249)
T TIGR03574 1 LIILTGLPGVGKSTFSKELAKKLSEKNIDVIILG 34 (249)
T ss_pred CEEEEcCCCCCHHHHHHHHHHHHHHcCCceEEEc
Confidence 5788899998888787888888877788887774
No 391
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal sighnal sequences of newly synthesized polypeptides at the ribosome. The SRP-polypeptide complex is then targeted to the membrane by an interaction between SRP and its cognated receptor (SR). In mammals, SRP consists of six protein subunits and a 7SL RNA. One of these subunits is a 54 kd protein (SRP54), which is a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 is a multidomain protein that consists of an N-terminal domain, followed by a central G (GTPase) domain and a C-terminal M domain.
Probab=26.93 E-value=1.2e+02 Score=24.26 Aligned_cols=35 Identities=26% Similarity=0.461 Sum_probs=28.0
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
++++-|-+|...+.....++..+.+.|.+|+.+|.
T Consensus 2 ~~~~~G~~G~GKTt~~~~la~~~~~~g~~v~~i~~ 36 (173)
T cd03115 2 VILLVGLQGVGKTTTAAKLALYLKKKGKKVLLVAA 36 (173)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 56666888888877778888888888999888774
No 392
>PRK05670 anthranilate synthase component II; Provisional
Probab=26.82 E-value=2.8e+02 Score=22.72 Aligned_cols=76 Identities=14% Similarity=0.204 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC--CCC---cc-CcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHH
Q 020156 128 DSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT--TPQ---FY-SASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILI 201 (330)
Q Consensus 128 ~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~--~~~---~~-~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~ 201 (330)
+.|...+++.+.++|+.+.++.+-.-+..... .+. .. ...-..|.....+.++.- . .++=++|.++|..+..
T Consensus 9 d~f~~~i~~~l~~~g~~~~v~~~~~~~~~~~~~~~~dglIlsgGpg~~~d~~~~~~~l~~~-~-~~~PvLGIClG~Qlla 86 (189)
T PRK05670 9 DSFTYNLVQYLGELGAEVVVYRNDEITLEEIEALNPDAIVLSPGPGTPAEAGISLELIREF-A-GKVPILGVCLGHQAIG 86 (189)
T ss_pred CchHHHHHHHHHHCCCcEEEEECCCCCHHHHHhCCCCEEEEcCCCCChHHcchHHHHHHHh-c-CCCCEEEECHHHHHHH
Confidence 45678888888889988877655311110000 000 00 001122322222233221 1 1455899999999888
Q ss_pred HHHh
Q 020156 202 RYLG 205 (330)
Q Consensus 202 ~~a~ 205 (330)
.+++
T Consensus 87 ~alG 90 (189)
T PRK05670 87 EAFG 90 (189)
T ss_pred HHhC
Confidence 8765
No 393
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=26.69 E-value=42 Score=27.05 Aligned_cols=48 Identities=19% Similarity=0.295 Sum_probs=25.2
Q ss_pred CCCCCCCCCCCCCccCcChHHHHHHHH----HHHHHhCC----CCcEEEEEEcHHHH
Q 020156 150 SRGCGDSPVTTPQFYSASFLGDMQEVV----AHVGSKYP----KAHLYAVGWSLGAN 198 (330)
Q Consensus 150 ~rG~G~S~~~~~~~~~~~~~~D~~~~i----~~l~~~~~----~~~i~lvG~SlGg~ 198 (330)
.-|||........+ .....+.+...+ +.+.++++ ..+|.++|.||+..
T Consensus 61 lVGHG~~~~~~~~l-~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFNNQTL-AGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTSSSEE-TTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCCCcee-CCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 34676552222222 123345666666 77776652 23899999999987
No 394
>cd03527 RuBisCO_small Ribulose bisphosphate carboxylase/oxygenase (Rubisco), small subunit. Rubisco is a bifunctional enzyme catalyzes the initial steps of two opposing metabolic pathways: photosynthetic carbon fixation and the competing process of photorespiration. Rubisco Form I, present in plants and green algae, is composed of eight large and eight small subunits. The nearly identical small subunits are encoded by a family of nuclear genes. After translation, the small subunits are translocated across the chloroplast membrane, where an N-terminal signal peptide is cleaved off. While the large subunits contain the catalytic activities, it has been shown that the small subunits are important for catalysis by enhancing the catalytic rate through inducing conformational changes in the large subunits.
Probab=26.65 E-value=2.7e+02 Score=20.59 Aligned_cols=64 Identities=16% Similarity=0.282 Sum_probs=41.8
Q ss_pred HHHHHHHHHhCCcEEEE-EcCCCCCCCCC-C--CCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEc
Q 020156 131 VRHMLLRARSKGWRVVV-FNSRGCGDSPV-T--TPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWS 194 (330)
Q Consensus 131 ~~~~~~~~~~~g~~v~~-~d~rG~G~S~~-~--~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S 194 (330)
+...++.+.++||.+.+ ++-.++-...- . ...+....-..++...|+..++.+|+.-|=++|+.
T Consensus 17 i~~QI~yll~qG~~~~lE~ad~~~~~~~yW~mwklP~f~~~d~~~Vl~ei~~C~~~~p~~YVRliG~D 84 (99)
T cd03527 17 IAKQIDYIISNGWAPCLEFTEPEHYDNRYWTMWKLPMFGCTDPAQVLREIEACRKAYPDHYVRVVGFD 84 (99)
T ss_pred HHHHHHHHHhCCCEEEEEcccCCCCCCCEEeeccCCCCCCCCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 56778899999998754 44444322211 1 01222234456777888888889999888888875
No 395
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=26.53 E-value=1.8e+02 Score=26.35 Aligned_cols=42 Identities=26% Similarity=0.450 Sum_probs=29.3
Q ss_pred EEEeCCCC--CCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q 020156 116 LILMPGLT--GGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPV 158 (330)
Q Consensus 116 vv~~HG~~--g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~ 158 (330)
||.+=.++ |+..+..+..+++.+.++|+++.++ .||+|+...
T Consensus 30 VIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~Il-SRGYg~~~~ 73 (311)
T TIGR00682 30 VVIVGNLSVGGTGKTPVVVWLAELLKDRGLRVGVL-SRGYGSKTK 73 (311)
T ss_pred EEEEeccccCCcChHHHHHHHHHHHHHCCCEEEEE-CCCCCCCCC
Confidence 45554333 4445677788888899999987655 679998643
No 396
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=26.52 E-value=2.7e+02 Score=20.66 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=18.4
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEc
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d 149 (330)
|+.+.+ +..++.-..-+...+...||+|+...
T Consensus 3 l~~~~~--~e~H~lG~~~~~~~l~~~G~~V~~lg 34 (119)
T cd02067 3 VIATVG--GDGHDIGKNIVARALRDAGFEVIDLG 34 (119)
T ss_pred EEEeeC--CchhhHHHHHHHHHHHHCCCEEEECC
Confidence 444444 23443334455666778999996554
No 397
>PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A.
Probab=26.52 E-value=80 Score=25.35 Aligned_cols=42 Identities=29% Similarity=0.446 Sum_probs=25.3
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~ 153 (330)
..+.+++++|-.|...+..++.+...+.+.+..++.++....
T Consensus 22 ~~~~~~ll~G~~G~GKT~ll~~~~~~~~~~~~~~~~~~~~~~ 63 (185)
T PF13191_consen 22 GSPRNLLLTGESGSGKTSLLRALLDRLAERGGYVISINCDDS 63 (185)
T ss_dssp -----EEE-B-TTSSHHHHHHHHHHHHHHHT--EEEEEEETT
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHHHhcCCEEEEEEEecc
Confidence 456799999999988887777777777666544777777544
No 398
>PLN02840 tRNA dimethylallyltransferase
Probab=26.50 E-value=2e+02 Score=27.40 Aligned_cols=78 Identities=15% Similarity=0.291 Sum_probs=44.9
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC----CCCC-CCCCCC------------------CCccCcCh
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS----RGCG-DSPVTT------------------PQFYSASF 168 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~----rG~G-~S~~~~------------------~~~~~~~~ 168 (330)
.+..+|++-|-+|+..+.....++..+ +..++..|. +|.- +|..++ ..++...|
T Consensus 19 ~~~~vi~I~GptgsGKTtla~~La~~~---~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F 95 (421)
T PLN02840 19 KKEKVIVISGPTGAGKSRLALELAKRL---NGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAF 95 (421)
T ss_pred cCCeEEEEECCCCCCHHHHHHHHHHHC---CCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHH
Confidence 445688888888876654434443332 456777776 3331 111111 12334667
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEEc
Q 020156 169 LGDMQEVVAHVGSKYPKAHLYAVGWS 194 (330)
Q Consensus 169 ~~D~~~~i~~l~~~~~~~~i~lvG~S 194 (330)
.+|+..+++.+..+ ++.| ++||-+
T Consensus 96 ~~~A~~~I~~i~~r-gkiP-IvVGGT 119 (421)
T PLN02840 96 FDDARRATQDILNR-GRVP-IVAGGT 119 (421)
T ss_pred HHHHHHHHHHHHhc-CCCE-EEEcCc
Confidence 88999999998876 4435 445543
No 399
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=26.36 E-value=4.2e+02 Score=23.52 Aligned_cols=23 Identities=13% Similarity=0.018 Sum_probs=17.2
Q ss_pred chHHHHHHHHHHHhCCcEEEEEc
Q 020156 127 EDSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 127 ~~~~~~~~~~~~~~~g~~v~~~d 149 (330)
+..-++.+++++.+.|.+-+++.
T Consensus 19 D~~~l~~l~~~l~~~Gv~gi~v~ 41 (289)
T cd00951 19 DEDAYRAHVEWLLSYGAAALFAA 41 (289)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC
Confidence 33445788899999999888763
No 400
>COG1341 Predicted GTPase or GTP-binding protein [General function prediction only]
Probab=26.34 E-value=1.2e+02 Score=28.43 Aligned_cols=39 Identities=8% Similarity=0.249 Sum_probs=31.1
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
..+.++++=|-..+..+.+...++..+.++|++|..+|.
T Consensus 71 ~~~~~vmvvG~vDSGKSTLt~~LaN~~l~rG~~v~iiDa 109 (398)
T COG1341 71 GKVGVVMVVGPVDSGKSTLTTYLANKLLARGRKVAIIDA 109 (398)
T ss_pred cCCcEEEEECCcCcCHHHHHHHHHHHHhhcCceEEEEeC
Confidence 456677777776666666777788999999999999998
No 401
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=26.15 E-value=2.7e+02 Score=25.44 Aligned_cols=43 Identities=26% Similarity=0.431 Sum_probs=30.2
Q ss_pred EEEeCCCC--CCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q 020156 116 LILMPGLT--GGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT 159 (330)
Q Consensus 116 vv~~HG~~--g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~ 159 (330)
||.+=.++ |+..+..+..++..+.++|+++.++ .||+|+....
T Consensus 37 VIsVGNltvGGTGKTP~v~~L~~~L~~~G~~~~Il-SRGYg~~~~~ 81 (326)
T PF02606_consen 37 VISVGNLTVGGTGKTPLVIWLARLLQARGYRPAIL-SRGYGRKSKG 81 (326)
T ss_pred EEEEcccccCCCCchHHHHHHHHHHHhcCCceEEE-cCCCCCCCCC
Confidence 55554333 4445677788899999999996655 6899986543
No 402
>PRK09065 glutamine amidotransferase; Provisional
Probab=26.07 E-value=4.3e+02 Score=22.75 Aligned_cols=35 Identities=14% Similarity=0.280 Sum_probs=26.2
Q ss_pred ChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHh
Q 020156 167 SFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLG 205 (330)
Q Consensus 167 ~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~ 205 (330)
.|..++.++|+.+... .+=++|.++|..+...+++
T Consensus 72 ~w~~~~~~~i~~~~~~----~~PvlGIC~G~Qlla~alG 106 (237)
T PRK09065 72 DWSERTADWLRQAAAA----GMPLLGICYGHQLLAHALG 106 (237)
T ss_pred hhHHHHHHHHHHHHHC----CCCEEEEChhHHHHHHHcC
Confidence 4566667777766554 5679999999999888765
No 403
>PRK06762 hypothetical protein; Provisional
Probab=25.90 E-value=1.1e+02 Score=24.24 Aligned_cols=25 Identities=20% Similarity=0.440 Sum_probs=18.3
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHH
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRA 138 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~ 138 (330)
|.+|++.|..|+..+.+.+.+...+
T Consensus 2 ~~li~i~G~~GsGKST~A~~L~~~l 26 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIAKQLQERL 26 (166)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 6789999999988766655555444
No 404
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=25.88 E-value=96 Score=27.88 Aligned_cols=34 Identities=18% Similarity=0.073 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC
Q 020156 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESH 209 (330)
Q Consensus 175 ~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~ 209 (330)
+++.|.+. +-.+-.+.|.|+|+.++..+|....+
T Consensus 29 Vl~aL~e~-gi~~~~iaGtS~GAiva~l~A~g~~~ 62 (306)
T COG1752 29 VLKALEEA-GIPIDVIAGTSAGAIVAALYAAGMDE 62 (306)
T ss_pred HHHHHHHc-CCCccEEEecCHHHHHHHHHHcCCCh
Confidence 44555444 23367999999999999999986544
No 405
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=25.78 E-value=4.7e+02 Score=23.15 Aligned_cols=75 Identities=12% Similarity=0.160 Sum_probs=45.0
Q ss_pred HHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC
Q 020156 132 RHMLLRARS-KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS 210 (330)
Q Consensus 132 ~~~~~~~~~-~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~ 210 (330)
......+.+ .+++++.+|..|..... .+.+.++.+.+....|...+.++.-++++.-+...+..+..
T Consensus 143 ~~~l~~l~~~~~~D~ViIDt~Gr~~~~-----------~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~- 210 (270)
T PRK06731 143 TRALTYFKEEARVDYILIDTAGKNYRA-----------SETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKD- 210 (270)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCcCC-----------HHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCC-
Confidence 344444433 47999999999874321 23344444444433344345556667888888888777654
Q ss_pred CCcceEEE
Q 020156 211 CPLSGAVS 218 (330)
Q Consensus 211 ~~i~~~v~ 218 (330)
..++++|.
T Consensus 211 ~~~~~~I~ 218 (270)
T PRK06731 211 IHIDGIVF 218 (270)
T ss_pred CCCCEEEE
Confidence 34766665
No 406
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=25.75 E-value=2.1e+02 Score=20.94 Aligned_cols=34 Identities=12% Similarity=0.168 Sum_probs=20.9
Q ss_pred CCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEE
Q 020156 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVF 148 (330)
Q Consensus 111 ~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~ 148 (330)
.+.++||++.+... .. ....+..+.+.||+|..+
T Consensus 63 ~~~~vvvyc~~g~~-~~---s~~~a~~l~~~G~~v~~l 96 (110)
T cd01521 63 KEKLFVVYCDGPGC-NG---ATKAALKLAELGFPVKEM 96 (110)
T ss_pred CCCeEEEEECCCCC-ch---HHHHHHHHHHcCCeEEEe
Confidence 36788888876321 11 234556677889986544
No 407
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=25.70 E-value=3.2e+02 Score=25.13 Aligned_cols=41 Identities=24% Similarity=0.380 Sum_probs=28.7
Q ss_pred EEEeCCCC--CCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q 020156 116 LILMPGLT--GGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP 157 (330)
Q Consensus 116 vv~~HG~~--g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~ 157 (330)
||.+=.++ |+.....+..+++.+.++|+++.++ .||+|+..
T Consensus 58 VIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~Il-SRGYg~~~ 100 (338)
T PRK01906 58 VVVVGNVTVGGTGKTPTVIALVDALRAAGFTPGVV-SRGYGAKI 100 (338)
T ss_pred EEEECCccCCCCChHHHHHHHHHHHHHcCCceEEE-ecCCCCCC
Confidence 55554333 4445667778888899999987554 78999764
No 408
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=25.66 E-value=3.1e+02 Score=22.47 Aligned_cols=77 Identities=21% Similarity=0.300 Sum_probs=43.6
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcE--EEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcE-EEEE
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWR--VVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHL-YAVG 192 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~--v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i-~lvG 192 (330)
+|-+.|.-......|+.+....+.+.+.. ++.+|.+| +..+....+++.+... +..-+ ++-|
T Consensus 3 vi~i~g~I~~~~~~~l~~~l~~a~~~~~~~ivl~inspG--------------G~v~~~~~I~~~l~~~-~~pvva~V~g 67 (178)
T cd07021 3 VIPIEGEIDPGLAAFVERALKEAKEEGADAVVLDIDTPG--------------GRVDSALEIVDLILNS-PIPTIAYVND 67 (178)
T ss_pred EEEEeeEECHHHHHHHHHHHHHHHhCCCCeEEEEEECcC--------------CCHHHHHHHHHHHHhC-CCCEEEEECC
Confidence 45566654444445666666666666554 45555554 3456777777777654 32222 3336
Q ss_pred EcHHHHHHHHHHhhc
Q 020156 193 WSLGANILIRYLGHE 207 (330)
Q Consensus 193 ~SlGg~ia~~~a~~~ 207 (330)
...||...+.+++..
T Consensus 68 ~AaSaG~~ia~a~d~ 82 (178)
T cd07021 68 RAASAGALIALAADE 82 (178)
T ss_pred chHHHHHHHHHhCCe
Confidence 666666666666543
No 409
>PLN02748 tRNA dimethylallyltransferase
Probab=25.60 E-value=2.3e+02 Score=27.38 Aligned_cols=78 Identities=14% Similarity=0.210 Sum_probs=45.1
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC----CCCC--CCCCC-----------------CCCccCcCh
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS----RGCG--DSPVT-----------------TPQFYSASF 168 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~----rG~G--~S~~~-----------------~~~~~~~~~ 168 (330)
.++.+|++-|-+|+..+.....++ ...+..++..|. +|.- ....+ ...++...|
T Consensus 20 ~~~~~i~i~GptgsGKs~la~~la---~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F 96 (468)
T PLN02748 20 GKAKVVVVMGPTGSGKSKLAVDLA---SHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDF 96 (468)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHH---HhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHH
Confidence 445588888988876653333332 223677888883 4431 11110 112444667
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEEc
Q 020156 169 LGDMQEVVAHVGSKYPKAHLYAVGWS 194 (330)
Q Consensus 169 ~~D~~~~i~~l~~~~~~~~i~lvG~S 194 (330)
.+++..+|+.+..+ ++.| ++||-|
T Consensus 97 ~~~A~~~I~~I~~r-gk~P-IlVGGT 120 (468)
T PLN02748 97 RDHAVPLIEEILSR-NGLP-VIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHhc-CCCe-EEEcCh
Confidence 88999999988776 3334 555544
No 410
>PRK06179 short chain dehydrogenase; Provisional
Probab=25.06 E-value=2.2e+02 Score=24.47 Aligned_cols=65 Identities=17% Similarity=0.212 Sum_probs=36.8
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccC--cChHHHHHHHHHHHHHhCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYS--ASFLGDMQEVVAHVGSKYP 184 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~--~~~~~D~~~~i~~l~~~~~ 184 (330)
.+++-|.+|+. -..++..+.++|++|++.+...-............ ....+++.++++.+.++++
T Consensus 6 ~vlVtGasg~i----G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 72 (270)
T PRK06179 6 VALVTGASSGI----GRATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAG 72 (270)
T ss_pred EEEEecCCCHH----HHHHHHHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence 45666654432 35678888999999999886521111110001111 1234677888888777655
No 411
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=25.04 E-value=1.4e+02 Score=28.36 Aligned_cols=41 Identities=27% Similarity=0.451 Sum_probs=0.0
Q ss_pred CCCCCCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEE
Q 020156 108 LLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVF 148 (330)
Q Consensus 108 ~~~~~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~ 148 (330)
......|.+|++=|+-|+......-.++.++.++|+.|.++
T Consensus 94 ~l~~~~P~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllV 134 (451)
T COG0541 94 NLAKKPPTVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLV 134 (451)
T ss_pred ccCCCCCeEEEEEeccCCChHhHHHHHHHHHHHcCCceEEE
No 412
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=24.98 E-value=5e+02 Score=23.15 Aligned_cols=87 Identities=10% Similarity=0.010 Sum_probs=41.9
Q ss_pred CchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHh
Q 020156 126 SEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLG 205 (330)
Q Consensus 126 ~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~ 205 (330)
-+..-++.+++.+.+.|.+-+++. +|.+....++. ++-.++++...+...++-.+++|.+..-.-+...+.
T Consensus 23 iD~~~l~~li~~l~~~Gv~gi~v~-----GstGE~~~Lt~----eEr~~v~~~~~~~~~g~~pvi~gv~~~t~~ai~~a~ 93 (296)
T TIGR03249 23 FDEAAYRENIEWLLGYGLEALFAA-----GGTGEFFSLTP----AEYEQVVEIAVSTAKGKVPVYTGVGGNTSDAIEIAR 93 (296)
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEC-----CCCcCcccCCH----HHHHHHHHHHHHHhCCCCcEEEecCccHHHHHHHHH
Confidence 333446888999999999888763 23333333333 333344444433322223355565422222223322
Q ss_pred hcCCCCCcceEEEEcCCC
Q 020156 206 HESHSCPLSGAVSLCNPF 223 (330)
Q Consensus 206 ~~~~~~~i~~~v~~~~p~ 223 (330)
.. +...++++++ .+|+
T Consensus 94 ~a-~~~Gadav~~-~pP~ 109 (296)
T TIGR03249 94 LA-EKAGADGYLL-LPPY 109 (296)
T ss_pred HH-HHhCCCEEEE-CCCC
Confidence 22 2223666655 4454
No 413
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=24.96 E-value=59 Score=29.36 Aligned_cols=25 Identities=20% Similarity=0.155 Sum_probs=19.2
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHhhc
Q 020156 183 YPKAHLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 183 ~~~~~i~lvG~SlGg~ia~~~a~~~ 207 (330)
.+-.|-.++|||+|=+.|+..++..
T Consensus 81 ~Gi~P~~v~GhSlGE~aA~~aaG~l 105 (318)
T PF00698_consen 81 WGIKPDAVIGHSLGEYAALVAAGAL 105 (318)
T ss_dssp TTHCESEEEESTTHHHHHHHHTTSS
T ss_pred cccccceeeccchhhHHHHHHCCcc
Confidence 3455889999999999888766543
No 414
>PRK05506 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional
Probab=24.65 E-value=1.2e+02 Score=30.42 Aligned_cols=38 Identities=16% Similarity=0.372 Sum_probs=30.6
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEc
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d 149 (330)
.+|.+|++.|+.|+..+...+.+...+...|..++.+|
T Consensus 458 ~~~~~i~~~G~~gsGKst~a~~l~~~l~~~~~~~~~l~ 495 (632)
T PRK05506 458 QKPATVWFTGLSGSGKSTIANLVERRLHALGRHTYLLD 495 (632)
T ss_pred CCcEEEEecCCCCchHHHHHHHHHHHHHHcCCCEEEEc
Confidence 45889999999998887777777778777788777775
No 415
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=24.55 E-value=4.7e+02 Score=23.77 Aligned_cols=80 Identities=11% Similarity=0.169 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCc--EEEEEEcHHHHHHHHHHhhcC
Q 020156 131 VRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAH--LYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 131 ~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~--i~lvG~SlGg~ia~~~a~~~~ 208 (330)
....+.....++|+++.+|-+|...... ...+.+..+.+.+....+..+ ++++-.+.-|.-++.-+..+-
T Consensus 185 v~~~l~~~~~~~~D~ViIDTaGr~~~~~--------~l~~eL~~~~~v~~~~~~~~p~~~~LVl~a~~g~~~~~~a~~f~ 256 (318)
T PRK10416 185 AFDAIQAAKARGIDVLIIDTAGRLHNKT--------NLMEELKKIKRVIKKADPDAPHEVLLVLDATTGQNALSQAKAFH 256 (318)
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCcCCH--------HHHHHHHHHHHHHhhhcCCCCceEEEEEECCCChHHHHHHHHHH
Q ss_pred CCCCcceEEE
Q 020156 209 HSCPLSGAVS 218 (330)
Q Consensus 209 ~~~~i~~~v~ 218 (330)
+...+.++|+
T Consensus 257 ~~~~~~giIl 266 (318)
T PRK10416 257 EAVGLTGIIL 266 (318)
T ss_pred hhCCCCEEEE
No 416
>PRK14974 cell division protein FtsY; Provisional
Probab=24.54 E-value=1.6e+02 Score=27.00 Aligned_cols=38 Identities=21% Similarity=0.499 Sum_probs=32.0
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEc
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d 149 (330)
.+|.++++-|.+|...+.....++..+.++|++|++++
T Consensus 138 ~~~~vi~~~G~~GvGKTTtiakLA~~l~~~g~~V~li~ 175 (336)
T PRK14974 138 GKPVVIVFVGVNGTGKTTTIAKLAYYLKKNGFSVVIAA 175 (336)
T ss_pred CCCeEEEEEcCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 46789999999998887777888888888999988875
No 417
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=24.47 E-value=2.9e+02 Score=24.93 Aligned_cols=74 Identities=14% Similarity=0.169 Sum_probs=43.2
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC----CCC-CCCCC------------------CCCccCcChHHH
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR----GCG-DSPVT------------------TPQFYSASFLGD 171 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r----G~G-~S~~~------------------~~~~~~~~~~~D 171 (330)
.||++-|-+|+..+. ++-.+.+++-.++..|.+ |.- +|..+ ...++...|.+|
T Consensus 5 ~ii~I~GpTasGKS~----LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~ 80 (300)
T PRK14729 5 KIVFIFGPTAVGKSN----ILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKE 80 (300)
T ss_pred cEEEEECCCccCHHH----HHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHH
Confidence 378888888876643 333444444588888864 331 11111 112344567789
Q ss_pred HHHHHHHHHHhCCCCcEEEEEEc
Q 020156 172 MQEVVAHVGSKYPKAHLYAVGWS 194 (330)
Q Consensus 172 ~~~~i~~l~~~~~~~~i~lvG~S 194 (330)
+..+|+.+..+ +..+ +++|-|
T Consensus 81 a~~~i~~i~~~-gk~P-ilvGGT 101 (300)
T PRK14729 81 ALKIIKELRQQ-KKIP-IFVGGS 101 (300)
T ss_pred HHHHHHHHHHC-CCCE-EEEeCc
Confidence 99999988776 3334 555544
No 418
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=24.40 E-value=1.8e+02 Score=25.59 Aligned_cols=41 Identities=17% Similarity=0.199 Sum_probs=29.6
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCC
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS 156 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S 156 (330)
++.++ |=+|...+...-.++..|.++|++|+++|.=-.|..
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~ 43 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADC 43 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcccc
Confidence 45555 655555555567888889999999999998655543
No 419
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=24.32 E-value=2e+02 Score=23.99 Aligned_cols=29 Identities=17% Similarity=0.383 Sum_probs=23.2
Q ss_pred cCcChHHHHHHHHHHHHHhCCCCcEEEEE
Q 020156 164 YSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (330)
Q Consensus 164 ~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 192 (330)
....+.+++..+++.++..+|..+|++++
T Consensus 107 ~~~~~~~~l~~ii~~l~~~~P~~~Iil~~ 135 (214)
T cd01820 107 TAEEIAEGILAIVEEIREKLPNAKILLLG 135 (214)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 34566788999999999888887888876
No 420
>TIGR00041 DTMP_kinase thymidylate kinase. Function: phosphorylation of DTMP to form DTDP in both de novo and salvage pathways of DTTP synthesis. Catalytic activity: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate.
Probab=24.29 E-value=1.9e+02 Score=23.53 Aligned_cols=39 Identities=15% Similarity=0.374 Sum_probs=31.9
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCC
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
..+|.+=|..|+..+.....+.+.+...|+.|+....|+
T Consensus 3 g~~IvieG~~GsGKsT~~~~L~~~l~~~g~~v~~~~~~~ 41 (195)
T TIGR00041 3 GMFIVIEGIDGAGKTTQANLLKKLLQENGYDVLFTREPG 41 (195)
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 357888999998887777888888888899998776664
No 421
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=24.28 E-value=1.4e+02 Score=23.79 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=22.9
Q ss_pred EEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC
Q 020156 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (330)
Q Consensus 117 v~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r 151 (330)
.+..+-+|...+.....++..+.+.|++|+++|.=
T Consensus 3 ~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D 37 (169)
T cd02037 3 AVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDAD 37 (169)
T ss_pred EEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCC
Confidence 33444334444444567777888899999999864
No 422
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.21 E-value=1.1e+02 Score=28.76 Aligned_cols=37 Identities=22% Similarity=0.513 Sum_probs=30.7
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVF 148 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~ 148 (330)
.+|.||++=|+-|+....-+-.++.++.++||.|+.+
T Consensus 99 ~kpsVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~Lv 135 (483)
T KOG0780|consen 99 GKPSVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALV 135 (483)
T ss_pred CCCcEEEEEeccCCCcceeHHHHHHHHHhcCCceeEE
Confidence 7899999999998777666678888899999987654
No 423
>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In E. coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.
Probab=24.15 E-value=1.9e+02 Score=23.30 Aligned_cols=40 Identities=18% Similarity=0.326 Sum_probs=32.6
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD 155 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~ 155 (330)
++.+=|..|+..+.....++..+..+|++|-++.+-+++.
T Consensus 3 vi~i~G~~gsGKTTli~~L~~~l~~~g~~V~~iK~~~~~~ 42 (159)
T cd03116 3 VIGFVGYSGSGKTTLLEKLIPALSARGLRVAVIKHDHHDF 42 (159)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCCcc
Confidence 6777788877777788889999989999998888877653
No 424
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.09 E-value=1.2e+02 Score=26.93 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=22.5
Q ss_pred HHHHHHHhCCC---CcEEEEEEcHHHHHHHHHHhhc
Q 020156 175 VVAHVGSKYPK---AHLYAVGWSLGANILIRYLGHE 207 (330)
Q Consensus 175 ~i~~l~~~~~~---~~i~lvG~SlGg~ia~~~a~~~ 207 (330)
+++.+.++.++ .-=.++|.|.||.+++.++...
T Consensus 20 vL~~Le~~~~~~~~~fD~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 20 LLKRLAEEFPSFLDQIDLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred HHHHHHHhCcccccceeEEEEeCHHHHHHHHHHcCc
Confidence 44555554331 1238999999999999998654
No 425
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=24.01 E-value=1.9e+02 Score=26.51 Aligned_cols=38 Identities=16% Similarity=0.218 Sum_probs=26.4
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
+..+|.+.|-+|...+.....++..+.++|++|+++|.
T Consensus 30 ~~~ii~v~gkgG~GKSt~a~nLa~~la~~g~rVllid~ 67 (329)
T cd02033 30 KTQIIAIYGKGGIGKSFTLANLSYMMAQQGKRVLLIGC 67 (329)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEe
Confidence 34455555866655555556777788889999988876
No 426
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=23.93 E-value=98 Score=30.47 Aligned_cols=28 Identities=21% Similarity=0.323 Sum_probs=22.6
Q ss_pred HhCCCCcEEEEEEcHHHHHHHHHHhhcC
Q 020156 181 SKYPKAHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 181 ~~~~~~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
+.++-.|-.++|||+|=+.++..|+-..
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGvls 287 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGVWK 287 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCCCC
Confidence 4556668899999999999998887653
No 427
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=23.73 E-value=2.2e+02 Score=20.98 Aligned_cols=21 Identities=14% Similarity=0.233 Sum_probs=16.6
Q ss_pred HHHHHHHHHhCCcEEEEEcCC
Q 020156 131 VRHMLLRARSKGWRVVVFNSR 151 (330)
Q Consensus 131 ~~~~~~~~~~~g~~v~~~d~r 151 (330)
...+...+.++||+|..+|..
T Consensus 17 l~~la~~l~~~G~~v~~~d~~ 37 (121)
T PF02310_consen 17 LLYLAAYLRKAGHEVDILDAN 37 (121)
T ss_dssp HHHHHHHHHHTTBEEEEEESS
T ss_pred HHHHHHHHHHCCCeEEEECCC
Confidence 456677788889999999774
No 428
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=23.59 E-value=3.4e+02 Score=20.74 Aligned_cols=78 Identities=14% Similarity=0.232 Sum_probs=39.9
Q ss_pred cEEEEeCCCCCCCchHHHHHH--HHHHHhCCcEEEEEcCCCCCCCCCCCC-CccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 114 PVLILMPGLTGGSEDSYVRHM--LLRARSKGWRVVVFNSRGCGDSPVTTP-QFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~--~~~~~~~g~~v~~~d~rG~G~S~~~~~-~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
...+.-.|.+|.......... .........+++++.. |..+.... ......+.+.+..+++.+++..++.++++
T Consensus 35 ~~~~~n~~~~g~~~~~~~~~~~~~~~~~~~~~d~vil~~---G~ND~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vv~ 111 (187)
T cd00229 35 GVEVINLGVSGATTADALRRLGLRLALLKDKPDLVIIEL---GTNDLGRGGDTSIDEFKANLEELLDALRERAPGAKVIL 111 (187)
T ss_pred CceEEeecccchhHHHHHhhcchhhhhccCCCCEEEEEe---cccccccccccCHHHHHHHHHHHHHHHHHHCCCCcEEE
Confidence 344445555444443222222 2334455677777766 32322111 12234566778888888887555556665
Q ss_pred EEEc
Q 020156 191 VGWS 194 (330)
Q Consensus 191 vG~S 194 (330)
++..
T Consensus 112 ~~~~ 115 (187)
T cd00229 112 ITPP 115 (187)
T ss_pred EeCC
Confidence 5543
No 429
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=23.33 E-value=1.3e+02 Score=26.06 Aligned_cols=34 Identities=24% Similarity=0.177 Sum_probs=23.5
Q ss_pred HHHHHHHhCCC-Cc--EEEEEEcHHHHHHHHHHhhcC
Q 020156 175 VVAHVGSKYPK-AH--LYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 175 ~i~~l~~~~~~-~~--i~lvG~SlGg~ia~~~a~~~~ 208 (330)
+++.+.+.... .+ -.++|-|.|+.++..++...+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCC
Confidence 45555554321 01 389999999999999997654
No 430
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=23.20 E-value=2.3e+02 Score=23.46 Aligned_cols=38 Identities=11% Similarity=0.297 Sum_probs=24.3
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r 151 (330)
.+|.+.-+-+|...+.....++..+.+.|++|+++|.=
T Consensus 18 kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 18 KVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 33444433334334444567778888899999999873
No 431
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=23.11 E-value=1.6e+02 Score=22.18 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=23.7
Q ss_pred EEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 117 v~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
+++-|-+|...+.....++..+.++|.+|+++|.
T Consensus 2 i~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~ 35 (116)
T cd02034 2 IAITGKGGVGKTTIAALLARYLAEKGKPVLAIDA 35 (116)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEC
Confidence 3455655655555556667778888999999985
No 432
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional
Probab=23.08 E-value=1.6e+02 Score=27.35 Aligned_cols=43 Identities=14% Similarity=0.345 Sum_probs=37.0
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCC
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD 155 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~ 155 (330)
++.+|-+=|..|+..+..+..++..+.++||+|.++-+-+|+.
T Consensus 204 ~~~~~~~~g~~~~GKtt~~~~l~~~l~~~g~~v~~iKh~~h~~ 246 (366)
T PRK14489 204 APPLLGVVGYSGTGKTTLLEKLIPELIARGYRIGLIKHSHHRV 246 (366)
T ss_pred CccEEEEecCCCCCHHHHHHHHHHHHHHcCCEEEEEEECCccc
Confidence 4668999999888888888999999999999999998877763
No 433
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=23.08 E-value=5.4e+02 Score=24.37 Aligned_cols=94 Identities=12% Similarity=0.195 Sum_probs=50.6
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccC--------cCh------------HH-HH
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYS--------ASF------------LG-DM 172 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~--------~~~------------~~-D~ 172 (330)
|+|+++ |......+. +..+.+.+.++|..++.+|.-=.+..... ..... ..+ .+ -.
T Consensus 2 ~tI~ii-gT~DTK~~E-~~yl~~~i~~~G~~v~~iDvg~~~~~~~~-~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~ 78 (403)
T PF06792_consen 2 KTIAII-GTLDTKGEE-LLYLRDQIEAQGVEVLLIDVGTLGEPSFP-PDISREEVARAAGDSIEAVRSSGDRGEAIEAMA 78 (403)
T ss_pred CEEEEE-EccCCCHHH-HHHHHHHHHHCCCcEEEEEcCCCCCCCCC-CCcCHHHHHHhcCCChHHhhccCCHHHHHHHHH
Confidence 345554 333333332 24455667789999999998544333211 11100 000 00 11
Q ss_pred HHHHHHHHHhCCC---CcEEEEEEcHHHHHHHHHHhhcCCC
Q 020156 173 QEVVAHVGSKYPK---AHLYAVGWSLGANILIRYLGHESHS 210 (330)
Q Consensus 173 ~~~i~~l~~~~~~---~~i~lvG~SlGg~ia~~~a~~~~~~ 210 (330)
..+.+++...+.. .-++-+|-|.|..++.......|-.
T Consensus 79 ~ga~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG 119 (403)
T PF06792_consen 79 RGAARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIG 119 (403)
T ss_pred HHHHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCC
Confidence 1122233333332 2578999999999999998888765
No 434
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=23.07 E-value=2.8e+02 Score=23.16 Aligned_cols=32 Identities=25% Similarity=0.331 Sum_probs=21.6
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~r 151 (330)
.+++-|.+|.. -..++..+.++|++|++...+
T Consensus 7 ~vlItG~sg~i----G~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 7 VALVTGASRGI----GRAIAERLAAQGANVVINYAS 38 (248)
T ss_pred EEEEECCCchH----HHHHHHHHHHCCCEEEEEeCC
Confidence 45566654432 356788888999999777654
No 435
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=23.03 E-value=2.1e+02 Score=26.02 Aligned_cols=65 Identities=17% Similarity=0.308 Sum_probs=41.8
Q ss_pred EEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC-CC----CCCCCCC--ccCcChHHHHHHHHHHHHHh
Q 020156 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC-GD----SPVTTPQ--FYSASFLGDMQEVVAHVGSK 182 (330)
Q Consensus 117 v~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~-G~----S~~~~~~--~~~~~~~~D~~~~i~~l~~~ 182 (330)
|++.|...++.. -+..+++.+.+.+.+.+++|.-+- |. |..+... ........|+.++++.++++
T Consensus 2 iYlt~~~a~~~~-~~~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~ 73 (316)
T PF13200_consen 2 IYLTAYSAGSPE-RLDKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEH 73 (316)
T ss_pred EEechhhcCCHH-HHHHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHC
Confidence 455565544432 357888888899999999999853 32 2211111 11222357999999999998
No 436
>PRK12937 short chain dehydrogenase; Provisional
Probab=23.03 E-value=2.4e+02 Score=23.71 Aligned_cols=65 Identities=9% Similarity=0.122 Sum_probs=36.2
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCC---------CCCCCc--cCcChHHHHHHHHHHHHHhCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP---------VTTPQF--YSASFLGDMQEVVAHVGSKYP 184 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~---------~~~~~~--~~~~~~~D~~~~i~~l~~~~~ 184 (330)
.+++.|.+++.. ..++..+.++|+++++...+...... ...... ......+++.++++.+.++++
T Consensus 7 ~vlItG~~~~iG----~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 7 VAIVTGASRGIG----AAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred EEEEeCCCchHH----HHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 566677544333 56788889999999877543211000 000000 011234677788888777665
No 437
>PF12846 AAA_10: AAA-like domain
Probab=22.95 E-value=1.3e+02 Score=26.29 Aligned_cols=35 Identities=31% Similarity=0.634 Sum_probs=27.4
Q ss_pred EeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCC
Q 020156 118 LMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 118 ~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
++=|-+|+..+..+..++..+...|..++++|.-|
T Consensus 5 ~i~G~tGsGKT~~~~~l~~~~~~~g~~~~i~D~~g 39 (304)
T PF12846_consen 5 LILGKTGSGKTTLLKNLLEQLIRRGPRVVIFDPKG 39 (304)
T ss_pred EEECCCCCcHHHHHHHHHHHHHHcCCCEEEEcCCc
Confidence 34466777777777788888899999999999864
No 438
>PRK07667 uridine kinase; Provisional
Probab=22.94 E-value=2.2e+02 Score=23.54 Aligned_cols=42 Identities=12% Similarity=0.334 Sum_probs=32.9
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCC
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~ 153 (330)
..+.||.+-|..|+..+.....+...+.+.|..+.+++.-.+
T Consensus 15 ~~~~iIgI~G~~gsGKStla~~L~~~l~~~~~~~~~i~~Dd~ 56 (193)
T PRK07667 15 ENRFILGIDGLSRSGKTTFVANLKENMKQEGIPFHIFHIDDY 56 (193)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEEEcCcc
Confidence 345789999999988877777788888888888777777654
No 439
>PF02972 Phycoerythr_ab: Phycoerythrin, alpha/beta chain; InterPro: IPR004228 Cryptophytes are unicellular photosynthetic algae that use a lumenally located light-harvesting system, which is distinct from the phycobilisome structure found in cyanobacteria and red algae. One of the key components of this system is water-soluble phycoerythrin (PE) 545 whose expression is enhanced by low light levels []. Phycoerythrin (PE) 545 is a heterodimeric of alpha(1)alpha(2)betabeta subunits. Each alpha subunit carries a covalently linked 15,16-dihydrobiliverdin chromophore that probably acts as the final energy acceptor. The architecture of the heterodimer suggests that PE 545 may dock to an acceptor protein via a deep cleft and that energy may be transferred via this intermediary protein to the reaction centre [].; GO: 0030089 phycobilisome; PDB: 1XG0_B 1QGW_B 1XF6_B.
Probab=22.64 E-value=62 Score=20.93 Aligned_cols=13 Identities=38% Similarity=1.191 Sum_probs=7.0
Q ss_pred EEEEcCCCCCCCC
Q 020156 145 VVVFNSRGCGDSP 157 (330)
Q Consensus 145 v~~~d~rG~G~S~ 157 (330)
+-+||.|||...+
T Consensus 5 ItiFDhRGC~r~~ 17 (57)
T PF02972_consen 5 ITIFDHRGCDRAP 17 (57)
T ss_dssp EEEEE-TT-SS--
T ss_pred EEEecccccCCCc
Confidence 5679999996543
No 440
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=22.63 E-value=1.9e+02 Score=24.96 Aligned_cols=40 Identities=15% Similarity=0.267 Sum_probs=31.7
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD 155 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~ 155 (330)
++.+=|..++..+.....++..|.++|++|.++.+-+|+.
T Consensus 3 vi~ivG~~gsGKTtl~~~l~~~L~~~G~~V~viK~~~~~~ 42 (229)
T PRK14494 3 AIGVIGFKDSGKTTLIEKILKNLKERGYRVATAKHTHHEF 42 (229)
T ss_pred EEEEECCCCChHHHHHHHHHHHHHhCCCeEEEEEecccCC
Confidence 5667777776666677888999999999999998876653
No 441
>cd01394 radB RadB. The archaeal protein radB shares similarity radA, the archaeal functional homologue to the bacterial RecA. The precise function of radB is unclear.
Probab=22.63 E-value=1.9e+02 Score=24.17 Aligned_cols=38 Identities=11% Similarity=0.225 Sum_probs=31.7
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
...++.+.|-+|+..+.+...++..+..+|..|+.+|.
T Consensus 18 ~g~i~~i~G~~GsGKT~l~~~~a~~~~~~g~~v~yi~~ 55 (218)
T cd01394 18 RGTVTQVYGPPGTGKTNIAIQLAVETAGQGKKVAYIDT 55 (218)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 45689999999988887777888888888999999984
No 442
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=22.62 E-value=5.6e+02 Score=22.96 Aligned_cols=23 Identities=13% Similarity=0.073 Sum_probs=17.1
Q ss_pred chHHHHHHHHHHHhCCcEEEEEc
Q 020156 127 EDSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 127 ~~~~~~~~~~~~~~~g~~v~~~d 149 (330)
+..-++.+++++.+.|.+-+++.
T Consensus 26 D~~~l~~li~~l~~~Gv~Gi~~~ 48 (303)
T PRK03620 26 DEAAYREHLEWLAPYGAAALFAA 48 (303)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC
Confidence 33345788889999999888763
No 443
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=22.51 E-value=93 Score=29.59 Aligned_cols=34 Identities=15% Similarity=0.022 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC
Q 020156 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESH 209 (330)
Q Consensus 175 ~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~ 209 (330)
+++.+.++. -.+=++.|.|.|+.++..++...++
T Consensus 91 VLkaL~E~g-l~p~vIsGTSaGAivAal~as~~~e 124 (421)
T cd07230 91 VLKALFEAN-LLPRIISGSSAGSIVAAILCTHTDE 124 (421)
T ss_pred HHHHHHHcC-CCCCEEEEECHHHHHHHHHHcCCHH
Confidence 556665541 1134899999999999999986554
No 444
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=22.45 E-value=1.8e+02 Score=24.93 Aligned_cols=77 Identities=21% Similarity=0.337 Sum_probs=44.1
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcE---EEEEcCCCCCCCCCCCC-----CccCcChHHHHHHHHHHHHHhCCC
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWR---VVVFNSRGCGDSPVTTP-----QFYSASFLGDMQEVVAHVGSKYPK 185 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~---v~~~d~rG~G~S~~~~~-----~~~~~~~~~D~~~~i~~l~~~~~~ 185 (330)
..=|++-|+.|-.. .+...++.....++-. +.+.=+-|..+|..+.+ ......+.+.++.++.++....|.
T Consensus 37 kaDv~~RGysGynS-RwALkvL~~ifp~~~s~~p~lvtVffGaNDs~l~~~~~~~~hvPl~Ey~dNlr~iv~~lks~~~~ 115 (245)
T KOG3035|consen 37 KADVLLRGYSGYNS-RWALKVLPEIFPKGSSIQPVLVTVFFGANDSCLPEPSSLGQHVPLEEYKDNLRKIVSHLKSLSPE 115 (245)
T ss_pred hhhhhhcccccchh-HHHHHHhhhhccccccCCceEEEEEecCccccCCCCCCCCCccCHHHHHHHHHHHHHHhhccCCc
Confidence 44566778866443 3344455555555433 45555566655543322 244567788888888888876444
Q ss_pred CcEEEE
Q 020156 186 AHLYAV 191 (330)
Q Consensus 186 ~~i~lv 191 (330)
.+|+++
T Consensus 116 ~riIli 121 (245)
T KOG3035|consen 116 TRIILI 121 (245)
T ss_pred ceEEEe
Confidence 444444
No 445
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=22.21 E-value=5.3e+02 Score=23.96 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=46.6
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEE-
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA- 190 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~l- 190 (330)
.+.+|++--|..++..+ +...++.+.+.|-.=+++-.||. |..+++..... |++ +|..+++.++ -||++
T Consensus 224 ~gkPVilk~G~~~t~~e--~~~Ave~i~~~Gn~~i~L~erg~--s~yp~~~~~~l----dl~-~i~~lk~~~~-~PV~~d 293 (360)
T PRK12595 224 VNKPVLLKRGLSATIEE--FIYAAEYIMSQGNGQIILCERGI--RTYEKATRNTL----DIS-AVPILKQETH-LPVMVD 293 (360)
T ss_pred cCCcEEEeCCCCCCHHH--HHHHHHHHHHCCCCCEEEECCcc--CCCCCCCCCCc----CHH-HHHHHHHHhC-CCEEEe
Confidence 34568888998655555 67778888888875566666665 33222212111 444 4556666543 37777
Q ss_pred EEEcHH
Q 020156 191 VGWSLG 196 (330)
Q Consensus 191 vG~SlG 196 (330)
..||.|
T Consensus 294 ~~Hs~G 299 (360)
T PRK12595 294 VTHSTG 299 (360)
T ss_pred CCCCCc
Confidence 799987
No 446
>PRK02399 hypothetical protein; Provisional
Probab=22.10 E-value=6.8e+02 Score=23.71 Aligned_cols=24 Identities=13% Similarity=0.058 Sum_probs=21.0
Q ss_pred cEEEEEEcHHHHHHHHHHhhcCCC
Q 020156 187 HLYAVGWSLGANILIRYLGHESHS 210 (330)
Q Consensus 187 ~i~lvG~SlGg~ia~~~a~~~~~~ 210 (330)
-++.+|-|.|..+++......|-.
T Consensus 98 gviglGGs~GT~lat~aMr~LPiG 121 (406)
T PRK02399 98 GVIGLGGSGGTALATPAMRALPIG 121 (406)
T ss_pred EEEEecCcchHHHHHHHHHhCCCC
Confidence 589999999999999998888865
No 447
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=22.09 E-value=1.9e+02 Score=24.67 Aligned_cols=27 Identities=7% Similarity=0.131 Sum_probs=20.3
Q ss_pred CchHHHHHHHHHHHhCCcEEEEEcCCC
Q 020156 126 SEDSYVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 126 ~~~~~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
..+.....++..+.++|++|+++|.--
T Consensus 13 GKTt~a~~LA~~la~~g~~VlliD~D~ 39 (251)
T TIGR01969 13 GKTTITANLGVALAKLGKKVLALDADI 39 (251)
T ss_pred cHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 334445677888889999999999853
No 448
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=22.03 E-value=90 Score=27.62 Aligned_cols=34 Identities=15% Similarity=0.316 Sum_probs=25.2
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEc
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d 149 (330)
..||++|-... ....+..++..+.++||+++.++
T Consensus 231 G~IILmHd~~~--T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTAS--STEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCcc--HHHHHHHHHHHHHHCCCEEEeHH
Confidence 35889996532 22446888999999999998764
No 449
>cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2.7.1.48), also known as uridine kinase or uridine-cytidine kinase (UCK).
Probab=22.03 E-value=3.4e+02 Score=22.08 Aligned_cols=37 Identities=16% Similarity=0.349 Sum_probs=26.8
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
||.+-|.+|+..+.....+...+...|..+.++..=+
T Consensus 1 ii~i~G~sgsGKttla~~l~~~l~~~~~~~~~i~~Dd 37 (179)
T cd02028 1 VVGIAGPSGSGKTTFAKKLSNQLRVNGIGPVVISLDD 37 (179)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEehhh
Confidence 4677888888877777777777777777776664433
No 450
>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=21.90 E-value=7.8e+02 Score=24.65 Aligned_cols=110 Identities=13% Similarity=0.202 Sum_probs=68.9
Q ss_pred CCcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCC-CCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEE
Q 020156 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG-DSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G-~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 190 (330)
..|.|+.+-|-+|+..+..++.++..+.+.-.+ +.+|-= -+.+...+.+.-..-+|+.++|+-.... .+++
T Consensus 67 PPPfIvavvGPpGtGKsTLirSlVrr~tk~ti~----~i~GPiTvvsgK~RRiTflEcp~Dl~~miDvaKIa----DLVl 138 (1077)
T COG5192 67 PPPFIVAVVGPPGTGKSTLIRSLVRRFTKQTID----EIRGPITVVSGKTRRITFLECPSDLHQMIDVAKIA----DLVL 138 (1077)
T ss_pred CCCeEEEeecCCCCChhHHHHHHHHHHHHhhhh----ccCCceEEeecceeEEEEEeChHHHHHHHhHHHhh----heeE
Confidence 345677688888877777788888887654221 122210 0122334455556669999999877664 3222
Q ss_pred ------EEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChHhhHHHHh
Q 020156 191 ------VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFR 233 (330)
Q Consensus 191 ------vG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~~~~~~~~ 233 (330)
+|+-|-.+--++.+..++- -.++.+..-.|+......+.
T Consensus 139 LlIdgnfGfEMETmEFLnil~~HGm----PrvlgV~ThlDlfk~~stLr 183 (1077)
T COG5192 139 LLIDGNFGFEMETMEFLNILISHGM----PRVLGVVTHLDLFKNPSTLR 183 (1077)
T ss_pred EEeccccCceehHHHHHHHHhhcCC----CceEEEEeecccccChHHHH
Confidence 5888888888898888874 35555666666655554443
No 451
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=21.70 E-value=6.8e+02 Score=23.53 Aligned_cols=88 Identities=10% Similarity=0.070 Sum_probs=52.7
Q ss_pred CcEEEEeCCCCCC-----CchHHHHHHHHHHHhCCcEEE-EEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCC
Q 020156 113 SPVLILMPGLTGG-----SEDSYVRHMLLRARSKGWRVV-VFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKA 186 (330)
Q Consensus 113 ~p~vv~~HG~~g~-----~~~~~~~~~~~~~~~~g~~v~-~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~ 186 (330)
...||++||=.-+ ....-|..+++.+.++|+-.+ =+-|-|+|. +..+|...+-..+...
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~-----------GleeDa~~lR~~a~~~---- 235 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD-----------GLEEDAYALRLFAEVG---- 235 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc-----------chHHHHHHHHHHHHhC----
Confidence 3459999974311 112234677777777776443 355556552 3456766544444443
Q ss_pred cEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCC
Q 020156 187 HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (330)
Q Consensus 187 ~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p 222 (330)
+-.++..|+.=+.. .|+++ |-+..+++.-
T Consensus 236 ~~~lva~S~SKnfg-----LYgER--VGa~~vva~~ 264 (396)
T COG1448 236 PELLVASSFSKNFG-----LYGER--VGALSVVAED 264 (396)
T ss_pred CcEEEEehhhhhhh-----hhhhc--cceeEEEeCC
Confidence 33888888876554 47787 8777777654
No 452
>COG1663 LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]
Probab=21.59 E-value=5.6e+02 Score=23.54 Aligned_cols=33 Identities=30% Similarity=0.392 Sum_probs=25.3
Q ss_pred CCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q 020156 124 GGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP 157 (330)
Q Consensus 124 g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~ 157 (330)
|+.....+..+++.+.++|+++-++ .||+|+..
T Consensus 59 GtGKTP~vi~la~~l~~rG~~~gvv-SRGYgg~~ 91 (336)
T COG1663 59 GTGKTPVVIWLAEALQARGVRVGVV-SRGYGGKL 91 (336)
T ss_pred CCCcCHHHHHHHHHHHhcCCeeEEE-ecCcCCCC
Confidence 3345567788999999999988766 78999844
No 453
>PRK09134 short chain dehydrogenase; Provisional
Probab=21.48 E-value=2.8e+02 Score=23.67 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=23.4
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
.+++-|.+++.. ..++..+.++|++|++.+.+.
T Consensus 11 ~vlItGas~giG----~~la~~l~~~g~~v~~~~~~~ 43 (258)
T PRK09134 11 AALVTGAARRIG----RAIALDLAAHGFDVAVHYNRS 43 (258)
T ss_pred EEEEeCCCcHHH----HHHHHHHHHCCCEEEEEeCCC
Confidence 566667654333 567788889999998887653
No 454
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=21.43 E-value=4e+02 Score=25.10 Aligned_cols=44 Identities=14% Similarity=0.188 Sum_probs=30.0
Q ss_pred HHHHHHhCC--cEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHh
Q 020156 134 MLLRARSKG--WRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK 182 (330)
Q Consensus 134 ~~~~~~~~g--~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~ 182 (330)
+...+.++| |++|++|.|.+++|+... ....+|...+++...+.
T Consensus 280 ~l~~~~~~g~~fDlIilDPPsF~r~k~~~-----~~~~rdy~~l~~~~~~i 325 (393)
T COG1092 280 WLRKAERRGEKFDLIILDPPSFARSKKQE-----FSAQRDYKDLNDLALRL 325 (393)
T ss_pred HHHHHHhcCCcccEEEECCcccccCcccc-----hhHHHHHHHHHHHHHHH
Confidence 344455554 999999999999886532 24456777777665554
No 455
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=21.41 E-value=1.5e+02 Score=25.85 Aligned_cols=21 Identities=24% Similarity=0.165 Sum_probs=18.1
Q ss_pred EEEEEEcHHHHHHHHHHhhcC
Q 020156 188 LYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 188 i~lvG~SlGg~ia~~~a~~~~ 208 (330)
-.++|-|.|+.++..|+...+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 479999999999999987554
No 456
>PTZ00445 p36-lilke protein; Provisional
Probab=21.39 E-value=4.3e+02 Score=22.60 Aligned_cols=65 Identities=11% Similarity=0.003 Sum_probs=40.9
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCC------CCCCCC--CCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHH
Q 020156 131 VRHMLLRARSKGWRVVVFNSRGC------GDSPVT--TPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGA 197 (330)
Q Consensus 131 ~~~~~~~~~~~g~~v~~~d~rG~------G~S~~~--~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg 197 (330)
...+++.|.+.|.+++++|+=-. |+-..+ .........+.++..+++.+.+. +-++.+|-+|-=.
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~--~I~v~VVTfSd~~ 103 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNS--NIKISVVTFSDKE 103 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHC--CCeEEEEEccchh
Confidence 56788889999999999998422 111111 11111223456777777777664 3388999998653
No 457
>PRK05568 flavodoxin; Provisional
Probab=21.23 E-value=3.8e+02 Score=20.47 Aligned_cols=78 Identities=21% Similarity=0.248 Sum_probs=40.6
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC--------CCCccCcCh--HHHHHHHHHHHHHhCC
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT--------TPQFYSASF--LGDMQEVVAHVGSKYP 184 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~--------~~~~~~~~~--~~D~~~~i~~l~~~~~ 184 (330)
++|+.+-..|+.. .....+.+.+.+.|..|-++|..-.-.++.. +|.+ .... ...+..+++.+.....
T Consensus 4 ~~IvY~S~~GnT~-~~a~~i~~~~~~~g~~v~~~~~~~~~~~~~~~~d~iilgsp~y-~~~~~~~~~~~~f~~~~~~~~~ 81 (142)
T PRK05568 4 INIIYWSGTGNTE-AMANLIAEGAKENGAEVKLLNVSEASVDDVKGADVVALGSPAM-GDEVLEEGEMEPFVESISSLVK 81 (142)
T ss_pred EEEEEECCCchHH-HHHHHHHHHHHHCCCeEEEEECCCCCHHHHHhCCEEEEECCcc-CcccccchhHHHHHHHhhhhhC
Confidence 3444444444433 4456666777778999888888642211110 1111 1111 1345566666554444
Q ss_pred CCcEEEEEEc
Q 020156 185 KAHLYAVGWS 194 (330)
Q Consensus 185 ~~~i~lvG~S 194 (330)
+.++.++|.+
T Consensus 82 ~k~~~~f~t~ 91 (142)
T PRK05568 82 GKKLVLFGSY 91 (142)
T ss_pred CCEEEEEEcc
Confidence 5577777764
No 458
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=21.12 E-value=98 Score=24.18 Aligned_cols=66 Identities=14% Similarity=0.218 Sum_probs=37.0
Q ss_pred EEEeCCCCC--CCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc-cCcChHHHHHHHHHHHHHh
Q 020156 116 LILMPGLTG--GSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQF-YSASFLGDMQEVVAHVGSK 182 (330)
Q Consensus 116 vv~~HG~~g--~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~-~~~~~~~D~~~~i~~l~~~ 182 (330)
|+++.|-.. +......+.+.+.+.+.|+.+-.+|++.+ .-+.-.... ......+|+.++++.+...
T Consensus 3 ilii~gS~r~~~~t~~l~~~~~~~l~~~g~e~~~i~l~~~-~~p~~~~~~~~~~~~~d~~~~~~~~l~~a 71 (152)
T PF03358_consen 3 ILIINGSPRKNSNTRKLAEAVAEQLEEAGAEVEVIDLADY-PLPCCDGDFECPCYIPDDVQELYDKLKEA 71 (152)
T ss_dssp EEEEESSSSTTSHHHHHHHHHHHHHHHTTEEEEEEECTTS-HCHHHHHHHHHTGCTSHHHHHHHHHHHHS
T ss_pred EEEEECcCCCCCHHHHHHHHHHHHHHHcCCEEEEEecccc-chhhcccccccccCCcHHHHHHHhceecC
Confidence 566666542 22234445566667777999999999865 111000000 0022347788888887765
No 459
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=20.97 E-value=3.7e+02 Score=21.78 Aligned_cols=53 Identities=11% Similarity=0.334 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCcceEEEEcCCCChH
Q 020156 170 GDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLV 226 (330)
Q Consensus 170 ~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~~~i~~~v~~~~p~d~~ 226 (330)
++..++++.+....+ .++++|....-.= .++.++.+..+..-.+.+++.+|..
T Consensus 88 ~~~~~i~~~I~~~~p--div~vglG~PkQE--~~~~~~~~~l~~~v~i~vG~~~d~~ 140 (172)
T PF03808_consen 88 EEEEAIINRINASGP--DIVFVGLGAPKQE--RWIARHRQRLPAGVIIGVGGAFDFL 140 (172)
T ss_pred hhHHHHHHHHHHcCC--CEEEEECCCCHHH--HHHHHHHHHCCCCEEEEECchhhhh
Confidence 456666777776534 5677766555333 2333333331122344455555543
No 460
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=20.94 E-value=1.6e+02 Score=25.74 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=25.0
Q ss_pred CCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCC
Q 020156 121 GLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD 155 (330)
Q Consensus 121 G~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~ 155 (330)
|=+|...+...-.++..+.++|++|+++|.=-.|.
T Consensus 7 gKGGvGKTT~a~nLA~~la~~G~rvlliD~Dpq~~ 41 (267)
T cd02032 7 GKGGIGKSTTSSNLSVALAKRGKKVLQIGCDPKHD 41 (267)
T ss_pred cCCCCCHHHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 64444444556678888899999999999854443
No 461
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=20.94 E-value=19 Score=14.71 Aligned_cols=6 Identities=67% Similarity=1.304 Sum_probs=2.6
Q ss_pred EEcHHH
Q 020156 192 GWSLGA 197 (330)
Q Consensus 192 G~SlGg 197 (330)
|++|||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 344443
No 462
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=20.87 E-value=2.1e+02 Score=24.51 Aligned_cols=37 Identities=14% Similarity=0.212 Sum_probs=24.3
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
|.+.-+=+|...+.....++..+.++|++|+++|.=-
T Consensus 4 i~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D~ 40 (261)
T TIGR01968 4 IVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADI 40 (261)
T ss_pred EEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 4444444344444445667777888999999999853
No 463
>PRK07952 DNA replication protein DnaC; Validated
Probab=20.77 E-value=1.7e+02 Score=25.54 Aligned_cols=35 Identities=11% Similarity=0.225 Sum_probs=28.4
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
-++++|-+|...+.....++..+.+.|..|+.++.
T Consensus 101 ~~~l~G~~GtGKThLa~aia~~l~~~g~~v~~it~ 135 (244)
T PRK07952 101 SFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITV 135 (244)
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEH
Confidence 67889988888877777788888888999988843
No 464
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=20.63 E-value=1.4e+02 Score=25.92 Aligned_cols=31 Identities=16% Similarity=-0.025 Sum_probs=21.3
Q ss_pred HHHHHHHhCCC---CcEEEEEEcHHHHHHHHHHh
Q 020156 175 VVAHVGSKYPK---AHLYAVGWSLGANILIRYLG 205 (330)
Q Consensus 175 ~i~~l~~~~~~---~~i~lvG~SlGg~ia~~~a~ 205 (330)
+++.+.+.... ..=.+.|.|.|+.++..|+.
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHhc
Confidence 45555554221 12389999999999999984
No 465
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=20.58 E-value=99 Score=30.61 Aligned_cols=80 Identities=19% Similarity=0.256 Sum_probs=41.2
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHh-CCc-------EEEEEcCCCCCCCCCCC---C-C-ccC--cChHHHHHHHHHHHH
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARS-KGW-------RVVVFNSRGCGDSPVTT---P-Q-FYS--ASFLGDMQEVVAHVG 180 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~-~g~-------~v~~~d~rG~G~S~~~~---~-~-~~~--~~~~~D~~~~i~~l~ 180 (330)
-|++.|- |+......+.+...+.+ .|. +++.+|..|.=..+... + + .+. .....++.++|+.++
T Consensus 323 riv~~GA-GsAgigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 401 (581)
T PLN03129 323 RILFAGA-GEAGTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSLQPFKKPFAHDHEPGASLLEAVKAIK 401 (581)
T ss_pred eEEEECC-CHHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccChHHHHHHHhhcccCCCHHHHHhccC
Confidence 4555665 33332333444555544 376 89999999864332211 0 0 000 011235555555544
Q ss_pred HhCCCCcEEEEEEcH-HHHHHHH
Q 020156 181 SKYPKAHLYAVGWSL-GANILIR 202 (330)
Q Consensus 181 ~~~~~~~i~lvG~Sl-Gg~ia~~ 202 (330)
+-+++|-|- ||.+.-.
T Consensus 402 ------ptvLIG~S~~~g~Ft~e 418 (581)
T PLN03129 402 ------PTVLIGLSGVGGTFTKE 418 (581)
T ss_pred ------CCEEEEecCCCCCCCHH
Confidence 559999995 5644433
No 466
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=20.54 E-value=3e+02 Score=25.81 Aligned_cols=45 Identities=22% Similarity=0.351 Sum_probs=29.4
Q ss_pred CCcEEEEeCCCCCCC-chHHHHHHHHHHHhCCcEEEEEcC-CCCCCC
Q 020156 112 DSPVLILMPGLTGGS-EDSYVRHMLLRARSKGWRVVVFNS-RGCGDS 156 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~-~~~~~~~~~~~~~~~g~~v~~~d~-rG~G~S 156 (330)
+++.||.+-..-|+. .+...-+++..+..+|++|+++|. -..|..
T Consensus 104 ~~~~vIav~n~KGGVGKTTta~nLA~~LA~~G~rVLlIDl~DpQ~nl 150 (387)
T PHA02519 104 KNPVVLAVMSHKGGVYKTSSAVHTAQWLALQGHRVLLIEGNDPQGTA 150 (387)
T ss_pred CCceEEEEecCCCCCcHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCc
Confidence 345555555444443 333456777788899999999995 766654
No 467
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=20.52 E-value=4.6e+02 Score=26.31 Aligned_cols=66 Identities=12% Similarity=0.097 Sum_probs=40.0
Q ss_pred CCcEEEEeCCCCCCCch-HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHh
Q 020156 112 DSPVLILMPGLTGGSED-SYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK 182 (330)
Q Consensus 112 ~~p~vv~~HG~~g~~~~-~~~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~ 182 (330)
-+.+++++||.....-. .-...+...|..+|..|-.+=+++.|.+-.. .....+-+..+++|+.+.
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~-----~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR-----PENRVKVLKEILDWFKRH 616 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC-----chhHHHHHHHHHHHHHHH
Confidence 45679999997532211 1124566777788988766666654433211 234556777888888765
No 468
>PRK08116 hypothetical protein; Validated
Probab=20.43 E-value=1.7e+02 Score=25.85 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=28.9
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 115 ~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
.-++++|-.|...+.....++..+.++|+.|+.++.
T Consensus 115 ~gl~l~G~~GtGKThLa~aia~~l~~~~~~v~~~~~ 150 (268)
T PRK08116 115 VGLLLWGSVGTGKTYLAACIANELIEKGVPVIFVNF 150 (268)
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEH
Confidence 357889998888877777778888888999988874
No 469
>PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif. They are found associated with IS21 family insertion sequences []. Functionally they have not been characterised, but they may be involved in transposition [].; GO: 0005524 ATP binding; PDB: 3EC2_A 3ECC_A 2W58_A 2QGZ_A.
Probab=20.32 E-value=1.5e+02 Score=24.33 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=25.5
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
=++++|-+|...+.....++..+..+|+.|..++.
T Consensus 49 ~l~l~G~~G~GKThLa~ai~~~~~~~g~~v~f~~~ 83 (178)
T PF01695_consen 49 NLILYGPPGTGKTHLAVAIANEAIRKGYSVLFITA 83 (178)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEH
T ss_pred EEEEEhhHhHHHHHHHHHHHHHhccCCcceeEeec
Confidence 47788888877766666677788889999988865
No 470
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=20.32 E-value=1.8e+02 Score=25.44 Aligned_cols=39 Identities=15% Similarity=0.214 Sum_probs=26.5
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD 155 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~ 155 (330)
|-+. |=+|...+...-.++..|.++|++|+++|.=-.|.
T Consensus 4 iav~-~KGGVGKTT~~~nLA~~La~~G~rVLlID~Dpq~~ 42 (274)
T PRK13235 4 VAIY-GKGGIGKSTTTQNTVAGLAEMGKKVMVVGCDPKAD 42 (274)
T ss_pred EEEe-CCCCccHHHHHHHHHHHHHHCCCcEEEEecCCccc
Confidence 4445 54344444556778888999999999998844443
No 471
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=20.31 E-value=5.5e+02 Score=21.94 Aligned_cols=27 Identities=11% Similarity=0.103 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHHHh------CCCCcEEEEEEc
Q 020156 168 FLGDMQEVVAHVGSK------YPKAHLYAVGWS 194 (330)
Q Consensus 168 ~~~D~~~~i~~l~~~------~~~~~i~lvG~S 194 (330)
...-+..+|+|+... +.+.++.++|.|
T Consensus 105 ipg~LKNaiDwls~~~~~~~~~~~KpvaivgaS 137 (219)
T TIGR02690 105 ITGSQKDQIDWIPLSVGPVRPTQGKTLAVMQVS 137 (219)
T ss_pred cCHHHHHHHHhcccCcccccccCCCcEEEEEeC
Confidence 334667778887653 234578888888
No 472
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=20.29 E-value=2.3e+02 Score=25.01 Aligned_cols=37 Identities=19% Similarity=0.394 Sum_probs=27.9
Q ss_pred cEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 114 p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
+.++++=|-+|...+.....++..+.+.|++|.++|.
T Consensus 72 ~~vi~l~G~~G~GKTTt~akLA~~l~~~g~~V~li~~ 108 (272)
T TIGR00064 72 PNVILFVGVNGVGKTTTIAKLANKLKKQGKSVLLAAG 108 (272)
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 3344444888877777778888888889999988875
No 473
>cd01672 TMPK Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor. TMPK represents the rate-limiting step in either de novo or salvage biosynthesis of thymidine triphosphate (TTP).
Probab=20.25 E-value=2.2e+02 Score=22.98 Aligned_cols=37 Identities=22% Similarity=0.544 Sum_probs=30.2
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
+|.+=|..|+..+...+.+...+.++|+.|+....+.
T Consensus 2 ~I~ieG~~GsGKtT~~~~L~~~l~~~g~~v~~~~~~~ 38 (200)
T cd01672 2 FIVFEGIDGAGKTTLIELLAERLEARGYEVVLTREPG 38 (200)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 5667788888877777888888888999998887765
No 474
>PRK12828 short chain dehydrogenase; Provisional
Probab=20.25 E-value=1.3e+02 Score=25.17 Aligned_cols=65 Identities=15% Similarity=0.168 Sum_probs=36.7
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCC------CCCCCc--cCcChHHHHHHHHHHHHHhCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP------VTTPQF--YSASFLGDMQEVVAHVGSKYP 184 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~------~~~~~~--~~~~~~~D~~~~i~~l~~~~~ 184 (330)
.+++.|.+|... ..++..+.++|++|++++..--.... ...... ......+++..+++.+...++
T Consensus 9 ~vlItGatg~iG----~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (239)
T PRK12828 9 VVAITGGFGGLG----RATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFG 81 (239)
T ss_pred EEEEECCCCcHh----HHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 466677655433 56778888999999999863211000 000000 111234677778887777655
No 475
>TIGR00750 lao LAO/AO transport system ATPase. Mutations have also been found that do not phosphorylate the periplasmic binding proteins, yet still allow transport. The ATPase activity of this protein seems to be necessary, however.
Probab=20.25 E-value=2.2e+02 Score=25.44 Aligned_cols=38 Identities=16% Similarity=0.340 Sum_probs=29.2
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcC
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~ 150 (330)
.+.+|.+-|.+|+..+.+...+...+.++|++|.+++.
T Consensus 33 ~~~~i~i~G~~G~GKttl~~~l~~~~~~~~~~v~~i~~ 70 (300)
T TIGR00750 33 NAHRVGITGTPGAGKSTLLEALGMELRRRGLKVAVIAV 70 (300)
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEec
Confidence 34566666998988888888888888889998866553
No 476
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=20.25 E-value=1.7e+02 Score=24.40 Aligned_cols=76 Identities=14% Similarity=0.208 Sum_probs=39.6
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccCcChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC
Q 020156 131 VRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS 210 (330)
Q Consensus 131 ~~~~~~~~~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a~~~~~~ 210 (330)
.....+.+.+++++++.+|-.|....+ ....+++..+++.+ .+. .++++=-+..+.-.+..+..+-+.
T Consensus 72 ~~~~l~~~~~~~~D~vlIDT~Gr~~~d--------~~~~~el~~~~~~~---~~~-~~~LVlsa~~~~~~~~~~~~~~~~ 139 (196)
T PF00448_consen 72 AREALEKFRKKGYDLVLIDTAGRSPRD--------EELLEELKKLLEAL---NPD-EVHLVLSATMGQEDLEQALAFYEA 139 (196)
T ss_dssp HHHHHHHHHHTTSSEEEEEE-SSSSTH--------HHHHHHHHHHHHHH---SSS-EEEEEEEGGGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCEEEEecCCcchhh--------HHHHHHHHHHhhhc---CCc-cceEEEecccChHHHHHHHHHhhc
Confidence 344556677789999999999864221 12334444444444 233 455544444444454444333222
Q ss_pred CCcceEEE
Q 020156 211 CPLSGAVS 218 (330)
Q Consensus 211 ~~i~~~v~ 218 (330)
..++++|+
T Consensus 140 ~~~~~lIl 147 (196)
T PF00448_consen 140 FGIDGLIL 147 (196)
T ss_dssp SSTCEEEE
T ss_pred ccCceEEE
Confidence 22666664
No 477
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=20.24 E-value=1.6e+02 Score=25.78 Aligned_cols=34 Identities=18% Similarity=0.010 Sum_probs=23.3
Q ss_pred HHHHHHHhCCC---CcEEEEEEcHHHHHHHHHHhhcC
Q 020156 175 VVAHVGSKYPK---AHLYAVGWSLGANILIRYLGHES 208 (330)
Q Consensus 175 ~i~~l~~~~~~---~~i~lvG~SlGg~ia~~~a~~~~ 208 (330)
+++.+.++.+. ..-.+.|-|.|+.++..|+...+
T Consensus 22 Vl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 22 VASCLLEHAPFLVANARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred HHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHcCCC
Confidence 45555554321 13468899999999999987654
No 478
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=20.22 E-value=3.1e+02 Score=22.81 Aligned_cols=39 Identities=8% Similarity=0.200 Sum_probs=24.4
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHh-CCcEEEEEcCC
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARS-KGWRVVVFNSR 151 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~-~g~~v~~~d~r 151 (330)
..+|.++-+-+|...+.....++..+.+ .|++|+++|.=
T Consensus 35 ~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 35 NNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred CeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 4455555444444444445567777765 69999998874
No 479
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=20.12 E-value=2e+02 Score=25.01 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=24.7
Q ss_pred CCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCC
Q 020156 121 GLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD 155 (330)
Q Consensus 121 G~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~ 155 (330)
|=+|...+...-.++..|.++|++|+++|.=-.|.
T Consensus 7 gKGGVGKTT~~~nLA~~La~~g~rVLliD~D~q~~ 41 (268)
T TIGR01281 7 GKGGIGKSTTSSNLSVAFAKLGKRVLQIGCDPKHD 41 (268)
T ss_pred cCCcCcHHHHHHHHHHHHHhCCCeEEEEecCcccc
Confidence 64444444445677888899999999999855543
No 480
>TIGR02237 recomb_radB DNA repair and recombination protein RadB. This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA (TIGR02012), eukaryotic RAD51 (TIGR02239) and DMC1 (TIGR02238), and archaeal RadA (TIGR02236).
Probab=20.02 E-value=2.5e+02 Score=23.23 Aligned_cols=40 Identities=18% Similarity=0.314 Sum_probs=32.7
Q ss_pred CcEEEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCC
Q 020156 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (330)
Q Consensus 113 ~p~vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG 152 (330)
+..++.+.|-+|+..+.+...++.....+|..|+.+|.-+
T Consensus 11 ~g~i~~i~G~~GsGKT~l~~~~~~~~~~~g~~v~yi~~e~ 50 (209)
T TIGR02237 11 RGTITQIYGPPGSGKTNICMILAVNAARQGKKVVYIDTEG 50 (209)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 3569999999998887777777777778899999999854
No 481
>cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine
Probab=20.01 E-value=4.8e+02 Score=21.14 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=25.2
Q ss_pred cChHHHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHH
Q 020156 166 ASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYL 204 (330)
Q Consensus 166 ~~~~~D~~~~i~~l~~~~~~~~i~lvG~SlGg~ia~~~a 204 (330)
..|...+.++++++... .+-++|.++|..+....+
T Consensus 64 ~~~~~~~~~~i~~~~~~----~~pilgiC~G~q~l~~~l 98 (188)
T cd01741 64 YPWLKKLKELIRQALAA----GKPVLGICLGHQLLARAL 98 (188)
T ss_pred ChHHHHHHHHHHHHHHC----CCCEEEECccHHHHHHHh
Confidence 34556677777776655 567999999998776665
No 482
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=20.01 E-value=2.2e+02 Score=26.27 Aligned_cols=38 Identities=16% Similarity=0.296 Sum_probs=28.4
Q ss_pred EEEeCCCCCCCchHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q 020156 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP 157 (330)
Q Consensus 116 vv~~HG~~g~~~~~~~~~~~~~~~~~g~~v~~~d~rG~G~S~ 157 (330)
||++|+..- . . ++.++..|.++|+.|.++-..+.+..+
T Consensus 2 il~~~~~~p--~-~-~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--G-Q-FRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--h-h-HHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 678886422 1 2 588999999999999998887766544
Done!