Your job contains 1 sequence.
>020162
MSKYGLQLRVNPSQQKKQPTNKPPLPPPKAFGLDDDGGGDDDVEGEISRQAIKNRALKEI
EEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRADTQPKYIHKLIHKADERKREHDI
IYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDV
SDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQRRPEKEEIQRAADTPEKE
RLSAYSNSASESSRGKEGHQAETSTSSRSIESSESNPASDRPVSDSSEQEKPSVEKPSDG
QPKPDHHKRGQDALAAAKERFMARKKAKEQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020162
(330 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006274 - symbol:AT2G27285 species:3702 "Ara... 665 1.6e-67 2
TAIR|locus:2039620 - symbol:AT2G27280 "AT2G27280" species... 517 7.8e-56 2
TAIR|locus:1009023139 - symbol:AT1G55928 "AT1G55928" spec... 457 1.6e-45 2
MGI|MGI:2144305 - symbol:Ccdc55 "coiled-coil domain conta... 304 1.7e-26 1
RGD|1309863 - symbol:Nsrp1 "nuclear speckle splicing regu... 289 1.8e-26 2
UNIPROTKB|Q2KIC0 - symbol:NSRP1 "Nuclear speckle splicing... 283 5.8e-26 2
UNIPROTKB|F1MMV5 - symbol:NSRP1 "Nuclear speckle-splicing... 283 7.3e-26 2
UNIPROTKB|E2QUP1 - symbol:NSRP1 "Uncharacterized protein"... 282 1.1e-25 2
UNIPROTKB|Q9H0G5 - symbol:NSRP1 "Nuclear speckle splicing... 273 2.2e-25 2
UNIPROTKB|F1P283 - symbol:NSRP1 "Uncharacterized protein"... 291 4.8e-25 1
UNIPROTKB|F1RN72 - symbol:NSRP1 "Uncharacterized protein"... 283 3.9e-24 1
FB|FBgn0030474 - symbol:CG15747 species:7227 "Drosophila ... 264 7.8e-23 1
ASPGD|ASPL0000006379 - symbol:AN6123 species:162425 "Emer... 202 1.1e-17 2
WB|WBGene00007627 - symbol:ccdc-55 species:6239 "Caenorha... 209 1.7e-16 1
UNIPROTKB|Q09252 - symbol:ccdc-55 "Nuclear speckle splici... 209 1.7e-16 1
UNIPROTKB|G4N7T6 - symbol:MGG_06365 "Uncharacterized prot... 210 1.7e-16 1
POMBASE|SPAC29A4.06c - symbol:SPAC29A4.06c "splicing prot... 151 1.7e-08 2
GENEDB_PFALCIPARUM|PF11_0486 - symbol:PF11_0486 "MAEBL, p... 152 2.3e-07 1
UNIPROTKB|Q8IHP3 - symbol:PF11_0486 "MAEBL, putative" spe... 152 2.3e-07 1
DICTYBASE|DDB_G0271058 - symbol:vilC "villin-like protein... 146 8.0e-07 1
DICTYBASE|DDB_G0289719 - symbol:DDB_G0289719 "SFRS2-inter... 132 2.8e-05 1
FB|FBgn0031273 - symbol:CG2839 species:7227 "Drosophila m... 129 3.2e-05 1
DICTYBASE|DDB_G0291063 - symbol:thoc2 "putative THO2 prot... 129 9.4e-05 1
UNIPROTKB|Q9KR10 - symbol:VC_1837 "TolA protein" species:... 119 0.00012 1
TIGR_CMR|VC_1837 - symbol:VC_1837 "tolA protein" species:... 119 0.00012 1
DICTYBASE|DDB_G0270864 - symbol:DDB_G0270864 "unknown" sp... 122 0.00023 1
RGD|1566064 - symbol:Prrc2c "proline-rich coiled-coil 2C"... 122 0.00032 2
WB|WBGene00016360 - symbol:C33G8.2 species:6239 "Caenorha... 115 0.00041 1
UNIPROTKB|J9P596 - symbol:TRDN "Triadin" species:9615 "Ca... 117 0.00059 1
GENEDB_PFALCIPARUM|PFI1065c - symbol:PFI1065c "hypothetic... 115 0.00073 1
UNIPROTKB|Q8I2T6 - symbol:PFI1065c "Putative uncharacteri... 115 0.00073 1
>TAIR|locus:505006274 [details] [associations]
symbol:AT2G27285 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008284 "positive
regulation of cell proliferation" evidence=RCA] EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC006233 UniGene:At.24034
eggNOG:NOG310283 KO:K13206 InterPro:IPR018612 Pfam:PF09745
HOGENOM:HOG000240822 EMBL:AY085624 EMBL:BT005450 EMBL:AK118763
EMBL:AK175231 EMBL:AK175237 IPI:IPI00529909 RefSeq:NP_565644.1
UniGene:At.13630 PRIDE:Q8S8I5 EnsemblPlants:AT2G27285.1
GeneID:817271 KEGG:ath:AT2G27285 TAIR:At2g27285 InParanoid:Q8S8I5
OMA:RESKYIA ProtClustDB:CLSN2917158 ArrayExpress:Q8S8I5
Genevestigator:Q8S8I5 Uniprot:Q8S8I5
Length = 323
Score = 665 (239.2 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 140/289 (48%), Positives = 195/289 (67%)
Query: 43 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRADTQPK 102
VE EISRQA K +A KEIEEQ +KAL EDP+ F YD YD+MKQK+V ++QDR + +P+
Sbjct: 37 VEKEISRQATKTKAHKEIEEQHKKALEEDPSAFSYDEVYDDMKQKAVLPRMQDREERKPR 96
Query: 103 YIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQ 162
YI L+ +A+ R++EH+I+YERKL KER K++HLF+DKEKFVTGAYK+KLEEQ++W E+
Sbjct: 97 YIQNLMKQAERREKEHEIVYERKLAKEREKDEHLFSDKEKFVTGAYKRKLEEQKKWLAEE 156
Query: 163 ALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQ 222
LR+LR+ERDDVTKK D+SDFYFN+ KNVAFG ++ K+AE + +++ +K EQ
Sbjct: 157 RLRELREERDDVTKKKDLSDFYFNIGKNVAFGAREVEA----KEAEKLEEQRKAEKLEEQ 212
Query: 223 RRPEK-EEIQRAADTPEKERLXXXXXXXXXXXRGKEGHQAXXXXXXXXXXXXXXNPASDR 281
R+ EK EE+++ EK+R G+ G S++
Sbjct: 213 RKAEKLEELRKEVTRVEKKRKSPEKEVSPDS--GEFG----SSRSKSLEPLEAEQAVSEK 266
Query: 282 PV-SDSSEQEKPSVEKPSDGQPKP-DHHKRGQDALAAAKERFMARKKAK 328
+ SD +E+ K S+++ + PK + KR +DA+AAAKERF+ARKKAK
Sbjct: 267 EMGSDGTEERKSSIKEAAKEVPKAINDQKRREDAIAAAKERFLARKKAK 315
Score = 39 (18.8 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 1 MSKYGLQLR 9
M KYGLQ+R
Sbjct: 1 MKKYGLQIR 9
>TAIR|locus:2039620 [details] [associations]
symbol:AT2G27280 "AT2G27280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006233
eggNOG:NOG310283 KO:K13206 InterPro:IPR018612 Pfam:PF09745
HOGENOM:HOG000240822 IPI:IPI00528821 PIR:A84671 RefSeq:NP_565643.1
UniGene:At.52934 PRIDE:Q9XIN5 EnsemblPlants:AT2G27280.1
GeneID:817270 KEGG:ath:AT2G27280 TAIR:At2g27280 InParanoid:Q9XIN5
OMA:RYIQHIM PhylomeDB:Q9XIN5 ProtClustDB:CLSN2917157
Genevestigator:Q9XIN5 Uniprot:Q9XIN5
Length = 427
Score = 517 (187.1 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
Identities = 103/240 (42%), Positives = 156/240 (65%)
Query: 1 MSKYGLQLRVNXXXXXXXXXXXXXXXXXXAFGLXXXXXXXXXVEGEISRQAIKNRALKEI 60
+ KYGLQ+R FG VE EISRQA K ++LK+I
Sbjct: 142 IKKYGLQIRAPSQKKQSSSRPLLRTASI--FG---EDDEENDVEKEISRQASKTKSLKKI 196
Query: 61 EEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRADTQPKYIHKLIHKADERKREHDI 120
E+Q +KA+ EDP+ F YD YD++K ++ ++QDR + + +YI ++ +A+ R++EH+I
Sbjct: 197 EKQHKKAIEEDPSAFAYDEVYDDIKHEAALPRMQDREEHKSRYIQHIMKQAERREKEHEI 256
Query: 121 IYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDV 180
+YERKL KER+K++HL++DKEKFVTG +K+KLEEQ++W E+ LR+LR+ERDDVTKK D+
Sbjct: 257 VYERKLAKERAKDEHLYSDKEKFVTGPFKRKLEEQKKWLEEERLRELREERDDVTKKNDL 316
Query: 181 SDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQRRPEKEEIQRAADTPEKE 240
S+FY N+ KNVAFG + ++ + E+ K ++ + + E+ R EK+ +PEKE
Sbjct: 317 SEFYINIGKNVAFGARDIEAREAGRLKELRKVDRLEELRKEETRKEKKR-----KSPEKE 371
Score = 76 (31.8 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 285 DSSEQEKPSVEKPSDG----QPKPDHHKRGQDALAAAKERFMARKKAK 328
D K SV KP D + K +DA+A AKERF++RKKAK
Sbjct: 378 DFGLSSKKSV-KPQDASIKEEAKETQKATREDAIATAKERFLSRKKAK 424
>TAIR|locus:1009023139 [details] [associations]
symbol:AT1G55928 "AT1G55928" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 eggNOG:NOG310283 KO:K13206
InterPro:IPR018612 Pfam:PF09745 EMBL:DQ487447 IPI:IPI00528263
RefSeq:NP_001031197.1 UniGene:At.66038 EnsemblPlants:AT1G55928.1
GeneID:3767464 KEGG:ath:AT1G55928 TAIR:At1g55928
HOGENOM:HOG000240822 OMA:HLFPDQV PhylomeDB:Q1G3Y7
Genevestigator:Q1G3Y7 Uniprot:Q1G3Y7
Length = 298
Score = 457 (165.9 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 93/197 (47%), Positives = 136/197 (69%)
Query: 43 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRAD-TQP 101
V+ EISRQA K ++LK+ EEQ +KAL EDP F YD YD+ KQ++ ++ +R + +P
Sbjct: 43 VDKEISRQASKTKSLKKFEEQHKKALEEDPCAFAYDEVYDDTKQEAPLPRLHERQECNKP 102
Query: 102 KYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWARE 161
Y + KAD R++E +I+YERKL KER+KE HLF D+ K VTG+YK+KLEE+ +W E
Sbjct: 103 IYNQLMKEKADRRQKEREIVYERKLAKERAKEQHLFPDQVKVVTGSYKRKLEERDQWLSE 162
Query: 162 QALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGN---KDSMNLDKKAEVTKPEKEVDK 218
+ LR+L +E+DDVTKK D+SDFYFN+ KNVAFG + +++ L ++ +V K E E+ +
Sbjct: 163 ERLRELGEEKDDVTKKKDLSDFYFNIGKNVAFGARDIKARETERLKEQRKVPKLE-ELRE 221
Query: 219 KAEQRRPEKEEIQRAAD 235
K + PE+ + + D
Sbjct: 222 KMKTESPERVVLPDSRD 238
Score = 38 (18.4 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 7/9 (77%), Positives = 9/9 (100%)
Query: 1 MSKYGLQLR 9
M+K+GLQLR
Sbjct: 12 MNKFGLQLR 20
>MGI|MGI:2144305 [details] [associations]
symbol:Ccdc55 "coiled-coil domain containing 55"
species:10090 "Mus musculus" [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607
"nuclear speck" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0032502 "developmental process"
evidence=ISO] MGI:MGI:2144305 GO:GO:0008380 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 GO:GO:0006913 GO:GO:0030529
EMBL:AL603842 GO:GO:0032502 GO:GO:0000381
GeneTree:ENSGT00700000104144 eggNOG:NOG310283 HOVERGEN:HBG081043
KO:K13206 OrthoDB:EOG43XV3P InterPro:IPR018612 Pfam:PF09745
OMA:NDKYRDR EMBL:AK168573 EMBL:BC089560 IPI:IPI00345960
RefSeq:NP_001012309.1 UniGene:Mm.156195 PhosphoSite:Q5NCR9
PRIDE:Q5NCR9 Ensembl:ENSMUST00000102494 GeneID:237859
KEGG:mmu:237859 UCSC:uc007kgg.1 CTD:237859 InParanoid:Q5NCR9
NextBio:383528 Bgee:Q5NCR9 CleanEx:MM_CCDC55 Genevestigator:Q5NCR9
GermOnline:ENSMUSG00000037958 Uniprot:Q5NCR9
Length = 542
Score = 304 (112.1 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 93/301 (30%), Positives = 143/301 (47%)
Query: 43 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQ 100
V + R+A K +A+K+ + + +KALAED V++YD YDEM++K K+ D +
Sbjct: 40 VSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSVYDEMQKKKEENNPKLLPGKDRK 99
Query: 101 PKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQ-QRWA 159
PKYIH L+ + RK+E + E+K+ +ER E+ F DKE FVT AYKKKLEE+ +
Sbjct: 100 PKYIHNLLKAVEIRKKEQEKRMEKKIQREREMENGEFDDKEAFVTSAYKKKLEERAEEEE 159
Query: 160 REQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEK---EV 216
RE+ L + DVTK+ D+S FY +L N A G + + V K EK
Sbjct: 160 REKRAAAL-EAHLDVTKQKDLSGFYRHL-LNQAVGEEAAPKSSFREARTVIKEEKLRGYP 217
Query: 217 DKKAEQRRPEKEE--IQRAADTPEKERLXXXXXXXXXXXRG-KEGHQAXXXXXXXXXXXX 273
D+ + RP ++ +QR A E+ G K H+
Sbjct: 218 DETNSESRPPQQSCVLQRGAQEAEENPDADREFDDESSEDGEKRDHKVKSRGEDTGASMK 277
Query: 274 XXNPASDRPVSDSSEQEKP-SVEKPSDGQPKPDH-H--KRGQDALAAAKERFMARKKAKE 329
+R S SS +E+ + S G H H ++ +D + K+R +K+
Sbjct: 278 HPKHHKNRAHSRSSSEERGLGTKHHSRGSQSRGHEHQDRQSRDQESCHKDRSHREEKSSH 337
Query: 330 Q 330
+
Sbjct: 338 R 338
>RGD|1309863 [details] [associations]
symbol:Nsrp1 "nuclear speckle splicing regulatory protein 1"
species:10116 "Rattus norvegicus" [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IEA;ISO;ISS]
[GO:0003729 "mRNA binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA;ISO;ISS] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA;ISO;ISS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA;ISO;ISS] [GO:0032502
"developmental process" evidence=IEA;ISO;ISS] RGD:1309863
GO:GO:0008380 GO:GO:0016607 GO:GO:0003729 GO:GO:0006397
GO:GO:0006913 GO:GO:0030529 GO:GO:0032502 GO:GO:0000381
GeneTree:ENSGT00700000104144 CTD:84081 eggNOG:NOG310283
HOVERGEN:HBG081043 KO:K13206 OrthoDB:EOG43XV3P InterPro:IPR018612
Pfam:PF09745 OMA:NDKYRDR EMBL:BC099120 IPI:IPI00370368
RefSeq:NP_001032266.1 UniGene:Rn.145937 PhosphoSite:Q4FZU3
PRIDE:Q4FZU3 Ensembl:ENSRNOT00000030749 GeneID:303346
KEGG:rno:303346 InParanoid:Q4FZU3 NextBio:651186
ArrayExpress:Q4FZU3 Genevestigator:Q4FZU3
GermOnline:ENSRNOG00000022502 Uniprot:Q4FZU3
Length = 547
Score = 289 (106.8 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 75/204 (36%), Positives = 113/204 (55%)
Query: 43 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQ 100
V + R+A K +A+++ + + +KALAED V++YD YDEM++K K+ D +
Sbjct: 40 VSESLQREAAKKQAMRQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEENNPKLLMGKDRK 99
Query: 101 PKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQ-QRWA 159
PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AYKKKLEE+ +
Sbjct: 100 PKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLEERAEEEE 159
Query: 160 REQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEK---EV 216
RE+ L + R DVTK+ D+S FY +L N A G + + V K EK
Sbjct: 160 REKRAAAL-EARLDVTKQKDLSGFYRHL-LNQAVGEEAVPKSSFREARTVIKEEKLRGYP 217
Query: 217 DKKAEQRRPEKE-EIQRAADTPEK 239
D+ + RP++ +Q + E+
Sbjct: 218 DETNSENRPQQNCALQSGVEEAEE 241
Score = 37 (18.1 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 285 DSSEQEKPSVEKPSDGQPKPDHHKRGQDALAAAKERFMARKKAKE 329
D S +E+ S + + K DHH + + K R ++ +E
Sbjct: 331 DRSHREEKSSHRHREASHK-DHHWKRHEHEDKPKGRGQGERQDRE 374
>UNIPROTKB|Q2KIC0 [details] [associations]
symbol:NSRP1 "Nuclear speckle splicing regulatory protein
1" species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0032502 "developmental process" evidence=ISS]
[GO:0006913 "nucleocytoplasmic transport" evidence=ISS] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISS] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] GO:GO:0008380 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 GO:GO:0006913 GO:GO:0030529
GO:GO:0032502 GO:GO:0000381 EMBL:BC112694 IPI:IPI00705608
RefSeq:NP_001039927.1 UniGene:Bt.31987 GeneID:539841
KEGG:bta:539841 CTD:84081 eggNOG:NOG310283 HOVERGEN:HBG081043
InParanoid:Q2KIC0 KO:K13206 OrthoDB:EOG43XV3P NextBio:20878253
InterPro:IPR018612 Pfam:PF09745 Uniprot:Q2KIC0
Length = 559
Score = 283 (104.7 bits), Expect = 5.8e-26, Sum P(2) = 5.8e-26
Identities = 84/261 (32%), Positives = 128/261 (49%)
Query: 43 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQ 100
V + R+A K +A+K+ + + +KALAED V++YD YDEM++K K+ D +
Sbjct: 42 VSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEESNPKLLLGKDRK 101
Query: 101 PKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQ-QRWA 159
PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AYKKKL+E+ +
Sbjct: 102 PKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEE 161
Query: 160 REQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEV--- 216
RE+ L + R DVTK+ D+S FY +L N A G + + + K EK
Sbjct: 162 RERRAAAL-EARLDVTKQRDLSGFYRHL-LNQAVGEEEVPTCSFREARSEIKEEKSKGYS 219
Query: 217 -DKKAEQRRPEKEEIQRAA----DTPEKERLXXXXXXXXXXXRGKEGH--QAXXXXXXXX 269
+ +E R P + I++ + P+ + G +G+ +
Sbjct: 220 DEVSSESRIPPENCIRQTGVKVEENPDADSDFDAKSSENDEMEGDKGNCRREKGTETLSS 279
Query: 270 XXXXXXNPASDRPVSDSSEQE 290
NPA R S S E+E
Sbjct: 280 HSKHHRNPA--RSPSSSEERE 298
Score = 39 (18.8 bits), Expect = 5.8e-26, Sum P(2) = 5.8e-26
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 280 DRPVSDSSEQEKPSVEKPSD-----GQPKPDHHKRGQDALAAAKERFMARKKAKEQ 330
DR S EQE+ D G K + K ++ + A KER+ K +++
Sbjct: 383 DREKYPSREQERHRQRNNYDRHNEKGCEKEEKSKEKEEHVKARKERYENSDKYRDR 438
>UNIPROTKB|F1MMV5 [details] [associations]
symbol:NSRP1 "Nuclear speckle-splicing regulatory protein
1" species:9913 "Bos taurus" [GO:0032502 "developmental process"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IEA] GO:GO:0016607
GO:GO:0003729 GO:GO:0006913 GO:GO:0030529 GO:GO:0032502
GO:GO:0000381 GeneTree:ENSGT00700000104144 IPI:IPI00705608
InterPro:IPR018612 Pfam:PF09745 OMA:NDKYRDR EMBL:DAAA02048626
Ensembl:ENSBTAT00000025760 Uniprot:F1MMV5
Length = 558
Score = 283 (104.7 bits), Expect = 7.3e-26, Sum P(2) = 7.3e-26
Identities = 84/261 (32%), Positives = 128/261 (49%)
Query: 43 VEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR--KVQDRADTQ 100
V + R+A K +A+K+ + + +KALAED V++YD YDEM++K K+ D +
Sbjct: 42 VSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEESNPKLLLGKDRK 101
Query: 101 PKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQ-QRWA 159
PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AYKKKL+E+ +
Sbjct: 102 PKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEE 161
Query: 160 REQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEV--- 216
RE+ L + R DVTK+ D+S FY +L N A G + + + K EK
Sbjct: 162 RERRAAAL-EARLDVTKQRDLSGFYRHL-LNQAVGEEEVPTCSFREARSEIKEEKSKGYS 219
Query: 217 -DKKAEQRRPEKEEIQRAA----DTPEKERLXXXXXXXXXXXRGKEGH--QAXXXXXXXX 269
+ +E R P + I++ + P+ + G +G+ +
Sbjct: 220 DEVSSESRIPPENCIRQTGVKVEENPDADSDFDAKSSENDEMEGDKGNCRREKGTETLSS 279
Query: 270 XXXXXXNPASDRPVSDSSEQE 290
NPA R S S E+E
Sbjct: 280 HSKHHRNPA--RSPSSSEERE 298
Score = 38 (18.4 bits), Expect = 7.3e-26, Sum P(2) = 7.3e-26
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 280 DRPVSDSSEQEKP----SVEKPSD-GQPKPDHHKRGQDALAAAKERFMARKKAKEQ 330
DR S EQE+ + ++ ++ G K + K ++ + A KER+ K +++
Sbjct: 382 DREKYPSREQERHRQLYNYDRHNEKGCEKEEKSKEKEEHVKARKERYENSDKYRDR 437
>UNIPROTKB|E2QUP1 [details] [associations]
symbol:NSRP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032502 "developmental process" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA] GO:GO:0016607 GO:GO:0003729
GO:GO:0006913 GO:GO:0030529 GO:GO:0032502 GO:GO:0000381
GeneTree:ENSGT00700000104144 CTD:84081 KO:K13206 InterPro:IPR018612
Pfam:PF09745 OMA:NDKYRDR EMBL:AAEX03006683 RefSeq:XP_868363.2
Ensembl:ENSCAFT00000030135 GeneID:610752 KEGG:cfa:610752
NextBio:20896301 Uniprot:E2QUP1
Length = 553
Score = 282 (104.3 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 71/187 (37%), Positives = 103/187 (55%)
Query: 31 FGLXXXXXXXXXVEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVR 90
FG V + R+A K +A+K+ + + +KALAED V++YD YDEM++K
Sbjct: 29 FGNDSDDDDETSVSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSIYDEMQKKREE 88
Query: 91 R--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAY 148
K+ D +PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AY
Sbjct: 89 NNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAY 148
Query: 149 KKKLEEQ-QRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKA 207
KKKL+E+ + RE+ L + R DVTK+ D+S FY +L N A G + + +
Sbjct: 149 KKKLQERAEEEEREKRAAAL-EARLDVTKQKDLSGFYRHL-LNQAVGEEEVPTCSFREAR 206
Query: 208 EVTKPEK 214
K EK
Sbjct: 207 SEIKEEK 213
Score = 37 (18.1 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 9/44 (20%), Positives = 24/44 (54%)
Query: 288 EQEKPSVEKPSD-GQPKPDHHKRGQDALAAAKERFMARKKAKEQ 330
++++ ++ S+ G+ K + K ++ + A KER K +++
Sbjct: 389 DRQRNEHDRHSEKGEEKEEKSKEKEEHMKARKERHENSDKYRDR 432
>UNIPROTKB|Q9H0G5 [details] [associations]
symbol:NSRP1 "Nuclear speckle splicing regulatory protein
1" species:9606 "Homo sapiens" [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IDA] [GO:0016607 "nuclear
speck" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0032502
"developmental process" evidence=IMP] GO:GO:0008380 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 GO:GO:0006913 GO:GO:0030529
GO:GO:0032502 GO:GO:0000381 EMBL:AC104984 CTD:84081
eggNOG:NOG310283 HOVERGEN:HBG081043 KO:K13206 OrthoDB:EOG43XV3P
InterPro:IPR018612 Pfam:PF09745 EMBL:AL136806 EMBL:CR533555
EMBL:BC040118 EMBL:BC105044 EMBL:BC105046 IPI:IPI00030274
RefSeq:NP_001248396.1 RefSeq:NP_115517.1 UniGene:Hs.462663
ProteinModelPortal:Q9H0G5 PhosphoSite:Q9H0G5 DMDM:74733524
PaxDb:Q9H0G5 PRIDE:Q9H0G5 DNASU:84081 Ensembl:ENST00000247026
GeneID:84081 KEGG:hsa:84081 UCSC:uc002heu.3 GeneCards:GC17P028445
HGNC:HGNC:25305 HPA:HPA015593 HPA:HPA015603 neXtProt:NX_Q9H0G5
PharmGKB:PA142672171 OMA:NDKYRDR PhylomeDB:Q9H0G5 GenomeRNAi:84081
NextBio:73307 ArrayExpress:Q9H0G5 Bgee:Q9H0G5 CleanEx:HS_CCDC55
Genevestigator:Q9H0G5 Uniprot:Q9H0G5
Length = 558
Score = 273 (101.2 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 67/167 (40%), Positives = 96/167 (57%)
Query: 31 FGLXXXXXXXXXVEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVR 90
FG V + R+A K +A+K+ + + +KALAED V++YD YDEM++K
Sbjct: 29 FGNDSDDDDETSVSESLQREAAKKQAMKQTKLEIQKALAEDATVYEYDSIYDEMQKKKEE 88
Query: 91 R--KVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAY 148
K+ D +PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT AY
Sbjct: 89 NNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAY 148
Query: 149 KKKLEEQ-QRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFG 194
KKKL+E+ + RE+ L + DVTK+ D+S FY +L N A G
Sbjct: 149 KKKLQERAEEEEREKRAAAL-EACLDVTKQKDLSGFYRHL-LNQAVG 193
Score = 44 (20.5 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 280 DRPVSDSSEQEKPSVE----KPSDGQPKPDHHKRGQDALAAAKERFMARKKAKEQ 330
DR EQE+ + +PS+ K + K ++ + KER+ K +++
Sbjct: 383 DREKYSQREQERDRQQNDQNRPSEKGEKEEKSKAKEEHMKVRKERYENNDKYRDR 437
>UNIPROTKB|F1P283 [details] [associations]
symbol:NSRP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0032502 "developmental process"
evidence=IEA] GO:GO:0016607 GO:GO:0003729 GO:GO:0006913
GO:GO:0030529 GO:GO:0032502 GO:GO:0000381
GeneTree:ENSGT00700000104144 InterPro:IPR018612 Pfam:PF09745
EMBL:AADN02025826 IPI:IPI00574640 Ensembl:ENSGALT00000006652
OMA:TICHIKS Uniprot:F1P283
Length = 543
Score = 291 (107.5 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 68/151 (45%), Positives = 97/151 (64%)
Query: 45 GE-ISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQK---SVRRKVQDRADTQ 100
GE + ++A+K +A+K+ + + +KAL+ED V++YD YDEM+QK S R + R + +
Sbjct: 34 GESLQKEALKKQAMKQTKLEIQKALSEDATVYEYDSIYDEMQQKKKESSARLLSGRDEKK 93
Query: 101 PKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKL----EEQQ 156
P+YIH ++ A+ RK+E + ERK+ KER E FADKE FVT AYKKKL EE++
Sbjct: 94 PRYIHNILKAAEIRKKEQEKRMERKIQKEREMEGGEFADKEAFVTSAYKKKLQERAEEEE 153
Query: 157 RWAREQALRDLRDERDDVTKKTDVSDFYFNL 187
R RE AL D VTK+ D+S FY +L
Sbjct: 154 RERREAALEAYLD----VTKQKDLSGFYRHL 180
>UNIPROTKB|F1RN72 [details] [associations]
symbol:NSRP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032502 "developmental process" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA] GO:GO:0016607 GO:GO:0003729
GO:GO:0006913 GO:GO:0030529 GO:GO:0032502 GO:GO:0000381
GeneTree:ENSGT00700000104144 KO:K13206 InterPro:IPR018612
Pfam:PF09745 OMA:NDKYRDR EMBL:CU972469 RefSeq:XP_003131832.1
Ensembl:ENSSSCT00000019367 GeneID:100517122 KEGG:ssc:100517122
Uniprot:F1RN72
Length = 554
Score = 283 (104.7 bits), Expect = 3.9e-24, P = 3.9e-24
Identities = 79/217 (36%), Positives = 115/217 (52%)
Query: 31 FGLXXXXXXXXXVEGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEM---KQK 87
FG V + R+A K +A+K+ + + +KALAED V++YD YDEM K++
Sbjct: 29 FGNDSDDDDETSVSESLQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEE 88
Query: 88 SVRRKVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGA 147
S R + + D +PKYIH L+ + RK+E + E+K+ +ER E F DKE FVT A
Sbjct: 89 SNPRLLLGK-DRKPKYIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSA 147
Query: 148 YKKKLEEQ-QRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKK 206
YKKKL+E+ + RE+ L + R DVTK+ D+S FY +L N A G + + +
Sbjct: 148 YKKKLQERAEEEERERRAAAL-EARLDVTKQRDLSGFYRHL-LNQAVGEEEVPTCSFREA 205
Query: 207 AEVTKPEKEV----DKKAEQRRP-EKEEIQRAADTPE 238
K EK + +E R P EK +Q E
Sbjct: 206 RSGIKEEKSKGYPDEVSSENRIPHEKCSLQTVVKVEE 242
>FB|FBgn0030474 [details] [associations]
symbol:CG15747 species:7227 "Drosophila melanogaster"
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] EMBL:AE014298
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
GeneTree:ENSGT00700000104144 KO:K13206 InterPro:IPR018612
Pfam:PF09745 FlyBase:FBgn0030474 RefSeq:NP_727694.1 UniGene:Dm.3769
MINT:MINT-1030688 EnsemblMetazoa:FBtr0073766 GeneID:32288
KEGG:dme:Dmel_CG15747 UCSC:CG15747-RA InParanoid:Q9VYE3 OMA:FYRHLYE
PhylomeDB:Q9VYE3 GenomeRNAi:32288 NextBio:777759
ArrayExpress:Q9VYE3 Bgee:Q9VYE3 Uniprot:Q9VYE3
Length = 387
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 81/255 (31%), Positives = 118/255 (46%)
Query: 63 QQRKALAEDPNVFDYDGCYDEMKQKSVRRK-VQDRADTQPKYIHKLIHKADERKREHDII 121
QQ KALAEDP +F YD YD+M K K + + +PKYI +L+ A+ RK E ++
Sbjct: 66 QQEKALAEDPTIFQYDELYDDMDSKREEAKQTKSQEPRKPKYIGRLMEHAERRKLEKELR 125
Query: 122 YERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDER-DDVTKKTDV 180
ER++ K+R E ++ DK+ +VT AY+KKLE R +EQ RD E DVTK+ D+
Sbjct: 126 IERQVQKDREAEGEMYKDKDTYVTAAYRKKLESI-RQMQEQEQRDEYLEAIGDVTKQKDL 184
Query: 181 SDFYFNLHKNVAFGGGNKDSMNLDKKAEVT-----KPEK-EVDKKAE--QRRPEKEEIQR 232
FY +L++ G +D + K A T KP K E K +RRP ++E ++
Sbjct: 185 DGFYRHLYEQKLGGPAQQDVVK-PKTAPTTDEVAYKPIKAEAVKHRSYRRRRPSEDEEEQ 243
Query: 233 AADTPEKERLXXXXXXXXXXXRGKEGHQAXXXXXXXXXXXXXXNPASDRPVSDSSEQEKP 292
T K QA + +SD +E+EK
Sbjct: 244 ---TKSKSDAASDATKSTDQTESIPA-QAHLTNNIDADSDFSIDDSSDEEDEKENEKEKN 299
Query: 293 SVE--KPSDGQPKPD 305
+ K D P+
Sbjct: 300 KLSQIKKEDKDKAPE 314
>ASPGD|ASPL0000006379 [details] [associations]
symbol:AN6123 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] EMBL:BN001301 EMBL:AACD01000104
eggNOG:NOG310283 InterPro:IPR018612 Pfam:PF09745 OrthoDB:EOG4MGWHK
RefSeq:XP_663727.1 EnsemblFungi:CADANIAT00006890 GeneID:2871060
KEGG:ani:AN6123.2 HOGENOM:HOG000214140 OMA:NAFEYDA Uniprot:Q5B007
Length = 448
Score = 202 (76.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 63/195 (32%), Positives = 96/195 (49%)
Query: 46 EISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRR-KVQDRADTQPKYI 104
E R+ AL +++ +A DP+++ YD YD + K ++ K ++ PKY+
Sbjct: 129 EREREYTNLSALHSMKKHASEAQDLDPSIYSYDAVYDSLHAKPEKKNKANADEESVPKYM 188
Query: 105 HKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQAL 164
L+ A+ RKR+ +R L KER E F DKEKFVT AYK + EE +R E+
Sbjct: 189 TSLLRSAEIRKRDQLRARDRMLAKEREAEGDEFDDKEKFVTSAYKAQQEELRRVEEEEKK 248
Query: 165 RDLRDE-RDDVTKKTDVSDFYFNLHKNVAFGGGNKDS-MNLDKKA--EVTKPEKEVDKKA 220
R+ +E R T + FY +L +A G D+ M ++A ++ + EV
Sbjct: 249 REQEEEERRKKNGGTGMVGFYRDL---LARGEEQHDAAMKATEEAARKIQENGGEVPTDT 305
Query: 221 EQRRPEKEEIQRAAD 235
Q EK E Q AA+
Sbjct: 306 TQE-DEKTEAQIAAE 319
Score = 52 (23.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 307 HKRGQDALAAAKERFMARKKAKE 329
HK + L+A +ER++ARK+ +E
Sbjct: 422 HKSATEVLSA-RERYLARKRERE 443
>WB|WBGene00007627 [details] [associations]
symbol:ccdc-55 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040039 "inductive
cell migration" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040039 EMBL:Z46787
GeneTree:ENSGT00700000104144 eggNOG:NOG310283 InterPro:IPR018612
Pfam:PF09745 PIR:T19327 RefSeq:NP_497831.1
ProteinModelPortal:Q09252 IntAct:Q09252 STRING:Q09252 PaxDb:Q09252
EnsemblMetazoa:C16C10.6.1 EnsemblMetazoa:C16C10.6.2 GeneID:175533
KEGG:cel:CELE_C16C10.6 CTD:175533 WormBase:C16C10.6
InParanoid:Q09252 OMA:ARDPTAI NextBio:888556 Uniprot:Q09252
Length = 392
Score = 209 (78.6 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 62/200 (31%), Positives = 107/200 (53%)
Query: 55 RALKEIEEQQRKALAEDPNVFDYDGCYDEMKQ-KSVRRKVQDRADT--QPKYIHKLIHKA 111
R K E + +KA AEDP +FDYDG YDE++ K+ +++ +AD + KY +I
Sbjct: 51 RVQKAAEREHQKAEAEDPTIFDYDGNYDEIQAIKNEKKEEARKADKNRESKYAENIIKAH 110
Query: 112 DERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEE----QQRWAREQALRDL 167
R+ E ER+ +ER KE F DKE FVTGAY+K+ EE +++ A E A D+
Sbjct: 111 ARRQLEQFSREERQQLREREKEGDEFDDKEVFVTGAYRKQQEEVKKHREQEAEEAAFNDM 170
Query: 168 RDERDDVTKKTDVSDFYFN-LHKN-VAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQ--R 223
+ + + N L ++ A K+ N+ K+ + ++E+D K E+ +
Sbjct: 171 TSVQKQKLWEIGMGRTLLNDLARDPTAIKQRKKEQKNVRKRED---SDEEIDPKPEKSDK 227
Query: 224 RPEKEEIQRA--ADTPEKER 241
+P E+++++ +D ++E+
Sbjct: 228 KPA-EKLKKSIYSDDSDEEK 246
>UNIPROTKB|Q09252 [details] [associations]
symbol:ccdc-55 "Nuclear speckle splicing regulatory protein
1 homolog" species:6239 "Caenorhabditis elegans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040039 EMBL:Z46787
GeneTree:ENSGT00700000104144 eggNOG:NOG310283 InterPro:IPR018612
Pfam:PF09745 PIR:T19327 RefSeq:NP_497831.1
ProteinModelPortal:Q09252 IntAct:Q09252 STRING:Q09252 PaxDb:Q09252
EnsemblMetazoa:C16C10.6.1 EnsemblMetazoa:C16C10.6.2 GeneID:175533
KEGG:cel:CELE_C16C10.6 CTD:175533 WormBase:C16C10.6
InParanoid:Q09252 OMA:ARDPTAI NextBio:888556 Uniprot:Q09252
Length = 392
Score = 209 (78.6 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 62/200 (31%), Positives = 107/200 (53%)
Query: 55 RALKEIEEQQRKALAEDPNVFDYDGCYDEMKQ-KSVRRKVQDRADT--QPKYIHKLIHKA 111
R K E + +KA AEDP +FDYDG YDE++ K+ +++ +AD + KY +I
Sbjct: 51 RVQKAAEREHQKAEAEDPTIFDYDGNYDEIQAIKNEKKEEARKADKNRESKYAENIIKAH 110
Query: 112 DERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEE----QQRWAREQALRDL 167
R+ E ER+ +ER KE F DKE FVTGAY+K+ EE +++ A E A D+
Sbjct: 111 ARRQLEQFSREERQQLREREKEGDEFDDKEVFVTGAYRKQQEEVKKHREQEAEEAAFNDM 170
Query: 168 RDERDDVTKKTDVSDFYFN-LHKN-VAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQ--R 223
+ + + N L ++ A K+ N+ K+ + ++E+D K E+ +
Sbjct: 171 TSVQKQKLWEIGMGRTLLNDLARDPTAIKQRKKEQKNVRKRED---SDEEIDPKPEKSDK 227
Query: 224 RPEKEEIQRA--ADTPEKER 241
+P E+++++ +D ++E+
Sbjct: 228 KPA-EKLKKSIYSDDSDEEK 246
>UNIPROTKB|G4N7T6 [details] [associations]
symbol:MGG_06365 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
EMBL:CM001234 InterPro:IPR018612 Pfam:PF09745 RefSeq:XP_003717209.1
EnsemblFungi:MGG_06365T0 GeneID:2684520 KEGG:mgr:MGG_06365
Uniprot:G4N7T6
Length = 423
Score = 210 (79.0 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 56/181 (30%), Positives = 91/181 (50%)
Query: 65 RKALAEDPNVFDYDGCYDEMKQKSVRRKVQ--DRADTQPKYIHKLIHKADERKREHDIIY 122
+ A EDP+++DYD YD K AD +P+Y+ L A+ R+R+ I
Sbjct: 119 QSAEKEDPSIYDYDAAYDSFKAAPAAAAAAKASAADRRPQYMANLKKMAEVRERDRKIAE 178
Query: 123 ERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSD 182
++K+ +ER E FADK+ FVT AYKK+ EE +R E+ R+ + D + ++
Sbjct: 179 DKKMKREREAEGDEFADKDMFVTEAYKKQQEENRRLEEEEKRRE--EAEDKKNEAGGMTG 236
Query: 183 FYFNLHKNVAFGGGNKDSMNLDKKAEVTK----PEKEVDKKAEQRRPEKEEIQRAADTPE 238
FY L G+K + K AE + P+K + +AE++ EK ++ A + +
Sbjct: 237 FYKRL-----LDQGDKRHAEMMKAAEEAQKNGGPQKPQEDEAEEK--EKTDVDMARELNQ 289
Query: 239 K 239
K
Sbjct: 290 K 290
>POMBASE|SPAC29A4.06c [details] [associations]
symbol:SPAC29A4.06c "splicing protein, human NSRP1
ortholog" species:4896 "Schizosaccharomyces pombe" [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] PomBase:SPAC29A4.06c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0003729 GO:GO:0030529
GO:GO:0000398 eggNOG:NOG310283 InterPro:IPR018612 Pfam:PF09745
OMA:ARDPTAI PIR:T38483 RefSeq:NP_594876.1
EnsemblFungi:SPAC29A4.06c.1 GeneID:2542169 KEGG:spo:SPAC29A4.06c
OrthoDB:EOG4MGWHK NextBio:20803240 Uniprot:O14009
Length = 355
Score = 151 (58.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 42/120 (35%), Positives = 62/120 (51%)
Query: 71 DPNVFDYDGCYDEMK---QKSVRRKVQDRADTQPKYIHKLIHKADERKREHDIIYERKLT 127
D +++ +D YD MK ++ + K + D +PKY+ LI A +RKR+ + ER L
Sbjct: 63 DASIYGFDEFYDSMKSAEREQMELKRLESKDRRPKYMENLIESAKKRKRDLLLARERALL 122
Query: 128 KERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNL 187
K+ E EKFVT +YKK EE Q+ A E R DE+ T + DFY ++
Sbjct: 123 KKNELEGD--DATEKFVTSSYKKHREEVQK-AIED--RKEEDEKSITDTTTGMKDFYASM 177
Score = 37 (18.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 289 QEKPSVEKPSDGQPKPDHHKRG--QDALAAAKERFMARKK 326
Q++ +K + K H R + + +A+ER++ RKK
Sbjct: 311 QKEKEFQKSREAALKI-HASRNTTETQVQSARERYLQRKK 349
>GENEDB_PFALCIPARUM|PF11_0486 [details] [associations]
symbol:PF11_0486 "MAEBL, putative" species:5833
"Plasmodium falciparum" [GO:0016020 "membrane" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0020007 "apical
complex" evidence=TAS] InterPro:IPR003298 Pfam:PF02430
GO:GO:0009405 GO:GO:0016020 EMBL:AE014186 HSSP:P04268 GO:GO:0020007
RefSeq:XP_001348153.1 ProteinModelPortal:Q8IHP3
EnsemblProtists:PF11_0486:mRNA GeneID:811029 KEGG:pfa:PF11_0486
EuPathDB:PlasmoDB:PF3D7_1147800.1 HOGENOM:HOG000065870
ProtClustDB:PTZ00121 InterPro:IPR021620 Pfam:PF11556 Uniprot:Q8IHP3
Length = 2055
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 67/286 (23%), Positives = 127/286 (44%)
Query: 50 QAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQD---RADTQPKYIHK 106
+A + R E+++ + K A++ + DE+K+K+ +K D + + K +
Sbjct: 1256 KAEEKRKADELKKAEEKKKADELKKSEEKKKADELKKKAEEKKKADELKKKAEEKKKADE 1315
Query: 107 LIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRD 166
L KA+E+K+ ++ K +E+ K D L +EK KK EE+++ + +
Sbjct: 1316 LKKKAEEKKKADEV----KKAEEKKKADELKKSEEKKKADELKKS-EEKKKADELKKKAE 1370
Query: 167 LRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQRRPE 226
+ + D++ KK + L K K + L KKAE K E+ KKAE+++ +
Sbjct: 1371 EKKKADELKKKAEEKKKADELKKKAE---EKKKADELKKKAEEKKKADELKKKAEEKK-K 1426
Query: 227 KEEIQRAADTPEKERLXXXXXXXXXXXRGKEGHQAXXXXXXXXXXXXXXNPASDRPVSDS 286
+E+++ A+ EK++ K+ + A ++ +D
Sbjct: 1427 ADELKKKAE--EKKK----AENLKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKAD- 1479
Query: 287 SEQEKPSVEKPSDGQPKPDHHKRGQDALAAAKERFMAR--KKAKEQ 330
E +K + EK + K K+ D L A+E+ A KKA+E+
Sbjct: 1480 -ELKKKAEEKKKADELKKAEEKKKADELKKAEEKKKADELKKAEEK 1524
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 64/297 (21%), Positives = 131/297 (44%)
Query: 46 EISRQAIKNRALKEIEEQQRKALAED-PNVFDYDGCYDEMKQKSVRRKVQDRADTQPKYI 104
E+ + K +A E+++ + K A++ + DE+K+K+ +K D + +
Sbjct: 1265 ELKKAEEKKKA-DELKKSEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKKKAEEK 1323
Query: 105 HKL--IHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQ 162
K + KA+E+K+ ++ K ++E+ K D L +EK KKK EE+++ +
Sbjct: 1324 KKADEVKKAEEKKKADEL----KKSEEKKKADELKKSEEKKKADELKKKAEEKKKADELK 1379
Query: 163 ALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQ 222
+ + + D++ KK + L K K + L KKAE K E+ KKAE+
Sbjct: 1380 KKAEEKKKADELKKKAEEKKKADELKKKAE---EKKKADELKKKAEEKKKADELKKKAEE 1436
Query: 223 RRPEK-----EEIQRAADTPEKERLXXXXXXXXXXXRGKEGHQAXXXXXXXXXXXXXXNP 277
++ + EE ++A + +K K+
Sbjct: 1437 KKKAENLKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKK 1496
Query: 278 ASDRPVSDS---SEQEKPSVE-KPSDGQPKPDHHKRGQDALAAAKERFMARKKAKEQ 330
A ++ +D +E++K + E K ++ + K D K+ ++ A +++ + +KK +E+
Sbjct: 1497 AEEKKKADELKKAEEKKKADELKKAEEKKKADELKKAEELKKAEEKKKVEQKKREEE 1553
>UNIPROTKB|Q8IHP3 [details] [associations]
symbol:PF11_0486 "MAEBL, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0008150 "biological_process"
evidence=ND] [GO:0020007 "apical complex" evidence=TAS]
InterPro:IPR003298 Pfam:PF02430 GO:GO:0009405 GO:GO:0016020
EMBL:AE014186 HSSP:P04268 GO:GO:0020007 RefSeq:XP_001348153.1
ProteinModelPortal:Q8IHP3 EnsemblProtists:PF11_0486:mRNA
GeneID:811029 KEGG:pfa:PF11_0486 EuPathDB:PlasmoDB:PF3D7_1147800.1
HOGENOM:HOG000065870 ProtClustDB:PTZ00121 InterPro:IPR021620
Pfam:PF11556 Uniprot:Q8IHP3
Length = 2055
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 67/286 (23%), Positives = 127/286 (44%)
Query: 50 QAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQD---RADTQPKYIHK 106
+A + R E+++ + K A++ + DE+K+K+ +K D + + K +
Sbjct: 1256 KAEEKRKADELKKAEEKKKADELKKSEEKKKADELKKKAEEKKKADELKKKAEEKKKADE 1315
Query: 107 LIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRD 166
L KA+E+K+ ++ K +E+ K D L +EK KK EE+++ + +
Sbjct: 1316 LKKKAEEKKKADEV----KKAEEKKKADELKKSEEKKKADELKKS-EEKKKADELKKKAE 1370
Query: 167 LRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQRRPE 226
+ + D++ KK + L K K + L KKAE K E+ KKAE+++ +
Sbjct: 1371 EKKKADELKKKAEEKKKADELKKKAE---EKKKADELKKKAEEKKKADELKKKAEEKK-K 1426
Query: 227 KEEIQRAADTPEKERLXXXXXXXXXXXRGKEGHQAXXXXXXXXXXXXXXNPASDRPVSDS 286
+E+++ A+ EK++ K+ + A ++ +D
Sbjct: 1427 ADELKKKAE--EKKK----AENLKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKAD- 1479
Query: 287 SEQEKPSVEKPSDGQPKPDHHKRGQDALAAAKERFMAR--KKAKEQ 330
E +K + EK + K K+ D L A+E+ A KKA+E+
Sbjct: 1480 -ELKKKAEEKKKADELKKAEEKKKADELKKAEEKKKADELKKAEEK 1524
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 64/297 (21%), Positives = 131/297 (44%)
Query: 46 EISRQAIKNRALKEIEEQQRKALAED-PNVFDYDGCYDEMKQKSVRRKVQDRADTQPKYI 104
E+ + K +A E+++ + K A++ + DE+K+K+ +K D + +
Sbjct: 1265 ELKKAEEKKKA-DELKKSEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKKKAEEK 1323
Query: 105 HKL--IHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQ 162
K + KA+E+K+ ++ K ++E+ K D L +EK KKK EE+++ +
Sbjct: 1324 KKADEVKKAEEKKKADEL----KKSEEKKKADELKKSEEKKKADELKKKAEEKKKADELK 1379
Query: 163 ALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQ 222
+ + + D++ KK + L K K + L KKAE K E+ KKAE+
Sbjct: 1380 KKAEEKKKADELKKKAEEKKKADELKKKAE---EKKKADELKKKAEEKKKADELKKKAEE 1436
Query: 223 RRPEK-----EEIQRAADTPEKERLXXXXXXXXXXXRGKEGHQAXXXXXXXXXXXXXXNP 277
++ + EE ++A + +K K+
Sbjct: 1437 KKKAENLKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKK 1496
Query: 278 ASDRPVSDS---SEQEKPSVE-KPSDGQPKPDHHKRGQDALAAAKERFMARKKAKEQ 330
A ++ +D +E++K + E K ++ + K D K+ ++ A +++ + +KK +E+
Sbjct: 1497 AEEKKKADELKKAEEKKKADELKKAEEKKKADELKKAEELKKAEEKKKVEQKKREEE 1553
>DICTYBASE|DDB_G0271058 [details] [associations]
symbol:vilC "villin-like protein C" species:44689
"Dictyostelium discoideum" [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR003128 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51089 SMART:SM00262 dictyBase:DDB_G0271058 GO:GO:0007010
EMBL:AAFI02000005 GenomeReviews:CM000150_GR SUPFAM:SSF47050
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626 eggNOG:NOG324767
RefSeq:XP_001134479.1 ProteinModelPortal:Q1ZXP5
EnsemblProtists:DDB0232136 GeneID:8617650 KEGG:ddi:DDB_G0271058
InParanoid:Q1ZXP5 OMA:DSRTEND Uniprot:Q1ZXP5
Length = 1528
Score = 146 (56.5 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 64/206 (31%), Positives = 104/206 (50%)
Query: 47 ISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDE---MKQKSVRRKVQDRADTQP-K 102
IS + + + KE+EE+ +K E + + E ++Q+ +RK+QD D + +
Sbjct: 133 ISAKEEREKRRKELEEEAKKLELEQQKIREEREKRKEERRLQQEEEQRKLQDLLDKKDSE 192
Query: 103 YIHKLIHKADER--KREHDIIYERKLTKERSKEDHLFADK-EKF-VTGAYKKKLEEQQRW 158
I KL + +E+ K E + I E++LT ++ KE+ ADK EK KLE++++
Sbjct: 193 KIEKLKQEENEKLEKEEKERI-EKELTDKKEKEEKELADKLEKERQEKELADKLEKEKKE 251
Query: 159 AREQALRD-LRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKD-SMNLDKKAEVT-KPEKE 215
E+ L D L ER D KK D + L + K+ + L+K+ E+ K EKE
Sbjct: 252 KEEKELADKLEKERLDKEKK-DKEEK--ELADKLEKESQEKELAEKLEKEKELADKLEKE 308
Query: 216 VDKKAEQRRPEKEEIQRAA-DTPEKE 240
+K E+ R EKE + A + EKE
Sbjct: 309 QKEKEEKERQEKELADKLAKEQKEKE 334
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 64/297 (21%), Positives = 128/297 (43%)
Query: 46 EISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRADTQPKY-I 104
E+ +Q I+ K EE++ + E + D D K + ++++ ++ + + K I
Sbjct: 154 ELEQQKIREEREKRKEERRLQQEEEQRKLQDLLDKKDSEKIEKLKQEENEKLEKEEKERI 213
Query: 105 HKLIHKADERKREHDIIYERKLTKERSKEDHLFADK-EKFVTGAYKKKLE---EQQRWAR 160
K + D++++E + + KL KER +++ ADK EK +K+L E++R +
Sbjct: 214 EKEL--TDKKEKEEKELAD-KLEKERQEKE--LADKLEKEKKEKEEKELADKLEKERLDK 268
Query: 161 EQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKA 220
E+ ++ ++ D + K++ + L K +K +K E + EKE+ K
Sbjct: 269 EKKDKEEKELADKLEKESQEKELAEKLEKEKELA--DKLEKEQKEKEEKERQEKELADKL 326
Query: 221 EQRRPEKEEIQRAADTPEKERLXXXXXXXXXXXRGK-------EGHQAXXXXXXXXXXXX 273
+ + EKEE + AD EKER + + E +
Sbjct: 327 AKEQKEKEE-KELADKLEKERQEKELADKLEKEKQEKELADKLEKEKQEKESLEKLEKEK 385
Query: 274 XXNPASDRPVSDSSEQEKPSVEKPSDGQPKPDHHKRGQDALAAAKERFMARKKAKEQ 330
+D+ + E+E+ ++ + Q K + ++ ++ LAAA K KE+
Sbjct: 386 QEKELADKLAKEQKEKEEKEEKEEKEKQEKEEKERKDKE-LAAAAAAAETEKLEKER 441
>DICTYBASE|DDB_G0289719 [details] [associations]
symbol:DDB_G0289719 "SFRS2-interacting protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0289719 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 EMBL:AAFI02000148 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 RefSeq:XP_636078.1
ProteinModelPortal:Q54H40 EnsemblProtists:DDB0188541 GeneID:8627288
KEGG:ddi:DDB_G0289719 eggNOG:KOG4430 InParanoid:Q54H40 OMA:ERESEHA
Uniprot:Q54H40
Length = 1419
Score = 132 (51.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 51/198 (25%), Positives = 96/198 (48%)
Query: 46 EISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRADTQPKYIH 105
E S+ + KN K +Q +K + ++ + + DE +K +KV+ + + K
Sbjct: 601 EESKDSKKN-VKKSASKQSKKKVTQESDE-ELKSESDEEIKKEKSKKVKKEKENKLKEKE 658
Query: 106 KLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALR 165
K + ++RK E + + K KE+ KE +KEK KK++E++++ RE +
Sbjct: 659 K--KEEEKRKEEKEKLEREKKEKEKEKEKEKEKEKEK-----EKKRIEKEKKKIRENEEK 711
Query: 166 DLRD-ERDDVTKKT-DVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQR 223
+ + E+D+ +K + D K N+++ +K+ E + EKE +K E+
Sbjct: 712 ERKQKEKDEKKRKEKEEKDRKEKEEKEEKERKENEENERKEKE-EKKRKEKERKEKEEKE 770
Query: 224 RPEKEEIQRAADTPEKER 241
R EKEE + + EK+R
Sbjct: 771 RKEKEE-KEIKEKEEKKR 787
Score = 119 (46.9 bits), Expect = 0.00079, P = 0.00079
Identities = 55/275 (20%), Positives = 113/275 (41%)
Query: 58 KEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRADTQPKYIHKLIHKADER-KR 116
K +Q +K + + +++ E + K ++ V+ A Q K K+ ++DE K
Sbjct: 578 KSSSKQSKKKVTKSKFESEHES---EEESKDSKKNVKKSASKQSK--KKVTQESDEELKS 632
Query: 117 EHDIIYERKLTKERSKE-DHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVT 175
E D +++ +K+ KE ++ +KEK +K+ EE+++ RE+ ++ E++
Sbjct: 633 ESDEEIKKEKSKKVKKEKENKLKEKEK---KEEEKRKEEKEKLEREKKEKEKEKEKEKEK 689
Query: 176 KKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQRRPEKEEIQRAAD 235
+K K + N++ K+ + K KE ++K + + EKEE +R +
Sbjct: 690 EKEKEKKRIEKEKKKIR---ENEEKERKQKEKD-EKKRKEKEEKDRKEKEEKEEKERK-E 744
Query: 236 TPEKERLXXXXXXXXXXXRGKEGHQAXXXXXXXXXXXXXXNPASDRPVSDSSEQEKPSVE 295
E ER R ++ + ++ D E+E+ E
Sbjct: 745 NEENERKEKEEKKRKEKERKEKEEKERKEKEEKEIKEKEEKKRKEKEEKDRKEKERKENE 804
Query: 296 KPSDGQPKPDHHKRGQDALAAAKERFMARKKAKEQ 330
+ + + K ++ KER K+ KE+
Sbjct: 805 EKKRKEKEEKERKEKEEREKQEKEREEKEKQEKEE 839
>FB|FBgn0031273 [details] [associations]
symbol:CG2839 species:7227 "Drosophila melanogaster"
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR001304
Pfam:PF00059 PROSITE:PS50041 SMART:SM00034 EMBL:AE014134
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 HSSP:P22897
GeneTree:ENSGT00700000104356 RefSeq:NP_608540.1
ProteinModelPortal:Q9VPS3 SMR:Q9VPS3 EnsemblMetazoa:FBtr0077999
GeneID:33244 KEGG:dme:Dmel_CG2839 UCSC:CG2839-RA
FlyBase:FBgn0031273 eggNOG:NOG243297 OMA:RIMEKER OrthoDB:EOG4DBRWH
PhylomeDB:Q9VPS3 GenomeRNAi:33244 NextBio:782628
ArrayExpress:Q9VPS3 Uniprot:Q9VPS3
Length = 826
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 63/292 (21%), Positives = 124/292 (42%)
Query: 44 EGEISRQAIKNRAL-KEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRADTQPK 102
E EI++ K R + KE +++ K E+ + +E K++ R++ ++R + +
Sbjct: 271 EDEINKNQGKPRIMEKERSKEEEKRKEEERRREEERKREEERKREEERKREEERKREEER 330
Query: 103 YIHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQ 162
+ K +ERK+E ER+ +ER +E + ++E+ K++ EE++R +E+
Sbjct: 331 KREEERRKEEERKKEE----EREREEERKREHNRKKEEER--KREEKRRKEEEKR--KEE 382
Query: 163 ALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLD-KKAEVTKPEKEVDKKAE 221
R +ER + ++ + K K+ D K+ + KE ++K E
Sbjct: 383 ERRK-EEERKEEERRKEEERKEEERRKEEE---RRKEKRRRDEKRRREEEKRKEEERKEE 438
Query: 222 QRRPE---KEEIQRAADTPEKERLXXXXXXXXXXXRGKEGHQAXXXXXXXXXXXXXXNPA 278
+RR E KEE ++A + +KE R +E +
Sbjct: 439 ERREEAERKEEERKAEERRKKEERRREEKRRREEKRRREEEERRKEEERREEEEKRKEEE 498
Query: 279 SDRPVSDSSEQEKPSVEKPSDGQPKPDHHKRGQDALAAAKERFMARKKAKEQ 330
+ E+EK E+ + + + + KR ++ KER +K KE+
Sbjct: 499 RRKDEERRREEEKRKEEERREKERRREEGKRKEEE-RREKERRREEEKRKEE 549
>DICTYBASE|DDB_G0291063 [details] [associations]
symbol:thoc2 "putative THO2 protein" species:44689
"Dictyostelium discoideum" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0291063
GenomeReviews:CM000154_GR EMBL:AAFI02000174 eggNOG:NOG270898
KO:K12879 InterPro:IPR021418 InterPro:IPR021726 Pfam:PF11262
Pfam:PF11732 OMA:SFYTKFI RefSeq:XP_635459.2
ProteinModelPortal:Q54F78 STRING:Q54F78 EnsemblProtists:DDB0233558
GeneID:8627959 KEGG:ddi:DDB_G0291063 ProtClustDB:CLSZ2848575
Uniprot:Q54F78
Length = 2110
Score = 129 (50.5 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 57/269 (21%), Positives = 111/269 (41%)
Query: 44 EGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRADTQPKY 103
E E R+ K R ++ E++R+ E + + + +++ R + ++R + K
Sbjct: 1423 EKEKEREREKEREKEKEREKEREREREKEREKEKEKERERERERE-REREKERDREREKE 1481
Query: 104 IHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQA 163
+ + ER+RE + E++ KER +E ++E+ +++ E+++ REQ
Sbjct: 1482 REREREREREREREREREKEKEKEKEREREREREREREREREREREREREKEKERDREQ- 1540
Query: 164 LRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQR 223
R+ ER+ K+ D SD N KN GG S DK + K+ D++ ++
Sbjct: 1541 -REKEREREQREKERDRSDR--NSDKNNNNDGGGSGSSRSDKSSSKDSGSKK-DQQTPRK 1596
Query: 224 RPEKEEI-QRAADTPEKERLXXXXXXXXXXXRGKEGHQAXXXXXXXXXXXXXXNPASDRP 282
EK E + D+ + R KE + +R
Sbjct: 1597 EIEKSESRENIRDSRSNDNNQSLSSSREIRERDKELKEKEQREKEQRDKDRENRERDNRD 1656
Query: 283 VSDSSEQEKPSVEKPSDGQPKPDHHKRGQ 311
V DS ++ + E+ G+P+ ++ Q
Sbjct: 1657 VRDSRNDQRGNQERDG-GEPQQRRQQQQQ 1684
>UNIPROTKB|Q9KR10 [details] [associations]
symbol:VC_1837 "TolA protein" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0005215 "transporter
activity" evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR014161 Pfam:PF06519 GO:GO:0016020 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005215 KO:K03646
TIGRFAMs:TIGR02794 PIR:A82152 RefSeq:NP_231471.1
ProteinModelPortal:Q9KR10 DNASU:2613591 GeneID:2613591
KEGG:vch:VC1837 PATRIC:20082716 OMA:VLHVILI ProtClustDB:CLSK874559
Uniprot:Q9KR10
Length = 356
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 63 QQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRADT---QPKYIHKLIHKADERKREHD 119
Q +A+ DP + +++ +K Q+R D + + + K +ER R+
Sbjct: 45 QMIEAVVIDPQLVRQQAQQIRSQREEAAKKEQERLDKLRRESEQLEKNRQAEEERIRQLK 104
Query: 120 IIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTD 179
+ K K + + L KE+ A +K EE++R A+ +A R +++E KK +
Sbjct: 105 E-QQAKEAKAAREAEKLREQKEQERLAAEQKAREEKERAAKAEAERKVKEE---AAKKAE 160
Query: 180 VSDFYFNLHKNVAFGGGNKDSMNLDKKA----EVTKPEKEVDKKAEQRRPEKEEIQR-AA 234
+ K A + + +K+A E K EKEV KAEQ R KE+ + AA
Sbjct: 161 QE----RVAKEAAAAKAEQQRIEREKEAKLAEEKAKREKEVAAKAEQERLAKEKAAKEAA 216
Query: 235 DTPEKER 241
D +KE+
Sbjct: 217 DKAKKEK 223
>TIGR_CMR|VC_1837 [details] [associations]
symbol:VC_1837 "tolA protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0006810 "transport" evidence=ISS] InterPro:IPR014161
Pfam:PF06519 GO:GO:0016020 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005215 KO:K03646 TIGRFAMs:TIGR02794 PIR:A82152
RefSeq:NP_231471.1 ProteinModelPortal:Q9KR10 DNASU:2613591
GeneID:2613591 KEGG:vch:VC1837 PATRIC:20082716 OMA:VLHVILI
ProtClustDB:CLSK874559 Uniprot:Q9KR10
Length = 356
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 63 QQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRADT---QPKYIHKLIHKADERKREHD 119
Q +A+ DP + +++ +K Q+R D + + + K +ER R+
Sbjct: 45 QMIEAVVIDPQLVRQQAQQIRSQREEAAKKEQERLDKLRRESEQLEKNRQAEEERIRQLK 104
Query: 120 IIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTD 179
+ K K + + L KE+ A +K EE++R A+ +A R +++E KK +
Sbjct: 105 E-QQAKEAKAAREAEKLREQKEQERLAAEQKAREEKERAAKAEAERKVKEE---AAKKAE 160
Query: 180 VSDFYFNLHKNVAFGGGNKDSMNLDKKA----EVTKPEKEVDKKAEQRRPEKEEIQR-AA 234
+ K A + + +K+A E K EKEV KAEQ R KE+ + AA
Sbjct: 161 QE----RVAKEAAAAKAEQQRIEREKEAKLAEEKAKREKEVAAKAEQERLAKEKAAKEAA 216
Query: 235 DTPEKER 241
D +KE+
Sbjct: 217 DKAKKEK 223
>DICTYBASE|DDB_G0270864 [details] [associations]
symbol:DDB_G0270864 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0270864 EMBL:AAFI02000005 ProtClustDB:CLSZ2847449
RefSeq:XP_645959.2 EnsemblProtists:DDB0305165 GeneID:8616903
KEGG:ddi:DDB_G0270864 eggNOG:NOG244368 InParanoid:Q55E22
OMA:SPNKFGG Uniprot:Q55E22
Length = 963
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 48/205 (23%), Positives = 99/205 (48%)
Query: 44 EGEISRQAIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRADTQPKY 103
E E Q + +E E++QRK E V + E + R K++ R + K
Sbjct: 256 EKERLNQQKEEAEREEREQEQRKRKEEQDRVNNEKKQRQEREDAEHREKLRLRNEQLEKE 315
Query: 104 IHKLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQA 163
++ K ++ K+E D + + + K + + + L DKE+ +KK EE+Q+ +EQ
Sbjct: 316 RQEIRDKEEQEKQEKDRLEKERREKLKQRNEQL--DKER--QEKFKKDQEEKQKQEQEQL 371
Query: 164 LRDLRDERDDVTKKTDVSDFYFNLHK---NVAFGGGNKDSMNLDKKAEVTKPEKEVDKKA 220
++ + + ++ +K ++D + K N ++ L ++A + + ++ V+
Sbjct: 372 EKE-KQRKLELQEKKRLADEQAAVAKKLENDRLAAEESENKRLTEEARLAEEKRLVE--L 428
Query: 221 EQRRPEKEEIQRAADTP---EKERL 242
E++R E+EE +R A+ E++RL
Sbjct: 429 EKKRSEEEEAKRLAEEARLAEEKRL 453
>RGD|1566064 [details] [associations]
symbol:Prrc2c "proline-rich coiled-coil 2C" species:10116
"Rattus norvegicus" [GO:0008022 "protein C-terminus binding"
evidence=ISO] RGD:1566064 InterPro:IPR009738 Pfam:PF07001
GeneTree:ENSGT00530000063496 IPI:IPI00950102
Ensembl:ENSRNOT00000004410 UCSC:RGD:1566064 RGD:1307838
ArrayExpress:D4A657 Uniprot:D4A657
Length = 2747
Score = 122 (48.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 51/190 (26%), Positives = 95/190 (50%)
Query: 51 AIKNRALKEIEEQQRKALAEDPNVFDYDGCYDEMKQKSVRRKVQDRADTQPKYIHKLIHK 110
A RA K EE++R+ + E C +++KQ + + ++ + P+ + + +
Sbjct: 456 AAVERARKRREEEERR-MEEQRKA----ACAEKLKQLDEKLGIIEKQPS-PEELRER-ER 508
Query: 111 ADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKKLEEQQRWAREQALRDLRD- 169
ER+RE + ER+L KE+ K+ + +++ +K+LE+Q+ +EQ L+ L++
Sbjct: 509 EKEREREKERERERELEKEQEKQREMERARQQ------EKELEQQRE--KEQELQRLKEQ 560
Query: 170 ERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAEVTKPEKEVDKKAEQRRPEKEE 229
E++ K+ + + NV N++S N KKAE E+ V + + R EKE
Sbjct: 561 EKEGELKEKEREEKVEPQEPNVEPATENQESENNCKKAE----EQPVFTRQDSNRSEKET 616
Query: 230 IQRAADT-PE 238
Q +T PE
Sbjct: 617 TQVVQETEPE 626
Score = 51 (23.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 282 PVSDSSEQEKPSV--EKPSDGQPKPDHHKRGQ 311
P S+ +E E V EKP+D P+P ++ Q
Sbjct: 1991 PASNGNENEVVPVLSEKPTDKVPEPKEQRQKQ 2022
>WB|WBGene00016360 [details] [associations]
symbol:C33G8.2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0007067 "mitosis" evidence=IMP] GO:GO:0009792
GO:GO:0007067 GeneTree:ENSGT00690000102070 EMBL:FO080765 PIR:T34137
RefSeq:NP_504775.1 UniGene:Cel.30633 ProteinModelPortal:Q18401
EnsemblMetazoa:C33G8.2 GeneID:183174 KEGG:cel:CELE_C33G8.2
UCSC:C33G8.2 CTD:183174 WormBase:C33G8.2 eggNOG:NOG145231
InParanoid:Q18401 OMA:DDVDKDM NextBio:920178 Uniprot:Q18401
Length = 390
Score = 115 (45.5 bits), Expect = 0.00041, P = 0.00041
Identities = 38/165 (23%), Positives = 80/165 (48%)
Query: 78 DGCYDEMKQKSVR-RKVQDRADTQPKYIHKLIHKADERKREHDIIYERKLTKERSKEDHL 136
D D+ K+K +R +K Q+ D + + K K D++K E D E+K K++ +++
Sbjct: 114 DSSEDKKKRKQMRDKKKQEEEDKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDD 173
Query: 137 FADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGGG 196
+++K KK +++ +++ +D + + DD + D K+
Sbjct: 174 DDEEDKKKDKKKKKDDNDEEEKEKDKKKKDKKKDDDDDEDENDKKKDK-KKKKDDKDDDE 232
Query: 197 NKDSMNLDKKAEVTKPEKEVDKKAEQRRPEKEEIQRAADTPEKER 241
N+D DKK + K +KE D E+ + +K++ ++ D E+++
Sbjct: 233 NEDDKKKDKKKK--KDDKEKDDDDEEEKDKKKKDKKKNDDDEEDK 275
>UNIPROTKB|J9P596 [details] [associations]
symbol:TRDN "Triadin" species:9615 "Canis lupus familiaris"
[GO:0016529 "sarcoplasmic reticulum" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR007943 InterPro:IPR010798 Pfam:PF05279
GO:GO:0016021 GO:GO:0016529 PANTHER:PTHR14106
GeneTree:ENSGT00510000049207 EMBL:AAEX03000413
Ensembl:ENSCAFT00000044100 Uniprot:J9P596
Length = 717
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 65/256 (25%), Positives = 100/256 (39%)
Query: 82 DEMKQKSVRRK--VQD--RADTQPKYIHKLIHKADERKREHDIIYER--KLTKERSKEDH 135
DE K+ S + K V++ + Q K K + A K+EH E+ K ER+KE+
Sbjct: 367 DEKKEDSKKTKTPVEEHPKGKKQEKK-EKYVEPAKSSKKEHSAPSEKQVKAKTERAKEET 425
Query: 136 LFADKEKFVTGAYKKKLEEQQRWAREQALRDLRDERDDVTKKTDVSDFYFNLHKNVAFGG 195
A +K V G K EE+ EQ ++R E+ T T D K V G
Sbjct: 426 SAASTKKAVPG----KKEEKTTKTVEQ---EIRKEKSGKTS-TASKDKEPIKGKEVKVPG 477
Query: 196 GNKDSMNLDKKAE-VTKPEKEVDKKAEQRRPEKEEIQRAADTPEKERLXXXXXXXXXXXR 254
K+ KK E + K +KEV K Q + +KEE + E +
Sbjct: 478 SLKEKEPEIKKDEKMPKADKEVKPKPPQSQVKKEEKSESQVKKEAKPEQDIAKPEKTVSH 537
Query: 255 GKEGHQAXXXXXXXXXXXXXXNPASDRPVSDSSEQEKPSVEKPSDGQPKPDHHKRGQDAL 314
GK + +P + QEK S +D +PKP + +
Sbjct: 538 GKP-EEKVVKQIKATEKAAIEKTVKPKPAKKAEHQEKESPTIKTD-KPKPTSKETPEVTE 595
Query: 315 AAAKERFMARKKAKEQ 330
+ K+ + K++KE+
Sbjct: 596 SGKKKIEKSEKESKEK 611
>GENEDB_PFALCIPARUM|PFI1065c [details] [associations]
symbol:PFI1065c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] EMBL:AL844508 RefSeq:XP_001352088.1
ProteinModelPortal:Q8I2T6 EnsemblProtists:PFI1065c:mRNA
GeneID:813493 KEGG:pfa:PFI1065c EuPathDB:PlasmoDB:PF3D7_0921700
HOGENOM:HOG000282950 ProtClustDB:CLSZ2435614 Uniprot:Q8I2T6
Length = 569
Score = 115 (45.5 bits), Expect = 0.00073, P = 0.00073
Identities = 45/176 (25%), Positives = 86/176 (48%)
Query: 49 RQAIKNRALKEIEEQQRKALAEDP---NVFDYDGCYDEMKQKSVRRKVQDRADTQPKYIH 105
R+ +K LK E + + + +D +VFDY ++MK S ++ D K
Sbjct: 113 RKLLKFYKLKRKNEGKEENVFDDKEKYSVFDY--IEEKMKNPS-NNSFNNKVDINMKEND 169
Query: 106 KLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKK-LEEQQRWAREQAL 164
L ++ +K+E+ ++ E+K +++ ++ ++ +++K++ KK LEEQQ + E+
Sbjct: 170 PLFNEG--KKKENILLGEKK-EEQQEQQKYILEEQQKYILEEQKKYILEEQQNYILEEPE 226
Query: 165 RDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAE--VTKPEKEVDK 218
D +D+ + D +N +NV KD L KK E TK +K++ K
Sbjct: 227 NITSD--NDIRNNENTEDDKYNDLENVE----KKDVETLSKKEEGKTTKKKKKLKK 276
>UNIPROTKB|Q8I2T6 [details] [associations]
symbol:PFI1065c "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] EMBL:AL844508 RefSeq:XP_001352088.1
ProteinModelPortal:Q8I2T6 EnsemblProtists:PFI1065c:mRNA
GeneID:813493 KEGG:pfa:PFI1065c EuPathDB:PlasmoDB:PF3D7_0921700
HOGENOM:HOG000282950 ProtClustDB:CLSZ2435614 Uniprot:Q8I2T6
Length = 569
Score = 115 (45.5 bits), Expect = 0.00073, P = 0.00073
Identities = 45/176 (25%), Positives = 86/176 (48%)
Query: 49 RQAIKNRALKEIEEQQRKALAEDP---NVFDYDGCYDEMKQKSVRRKVQDRADTQPKYIH 105
R+ +K LK E + + + +D +VFDY ++MK S ++ D K
Sbjct: 113 RKLLKFYKLKRKNEGKEENVFDDKEKYSVFDY--IEEKMKNPS-NNSFNNKVDINMKEND 169
Query: 106 KLIHKADERKREHDIIYERKLTKERSKEDHLFADKEKFVTGAYKKK-LEEQQRWAREQAL 164
L ++ +K+E+ ++ E+K +++ ++ ++ +++K++ KK LEEQQ + E+
Sbjct: 170 PLFNEG--KKKENILLGEKK-EEQQEQQKYILEEQQKYILEEQKKYILEEQQNYILEEPE 226
Query: 165 RDLRDERDDVTKKTDVSDFYFNLHKNVAFGGGNKDSMNLDKKAE--VTKPEKEVDK 218
D +D+ + D +N +NV KD L KK E TK +K++ K
Sbjct: 227 NITSD--NDIRNNENTEDDKYNDLENVE----KKDVETLSKKEEGKTTKKKKKLKK 276
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.353 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 330 278 0.00081 115 3 11 23 0.46 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 596 (63 KB)
Total size of DFA: 185 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.50u 0.12s 36.62t Elapsed: 00:00:02
Total cpu time: 36.51u 0.12s 36.63t Elapsed: 00:00:02
Start: Sat May 11 05:11:37 2013 End: Sat May 11 05:11:39 2013