Query 020165
Match_columns 330
No_of_seqs 264 out of 1769
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 07:32:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020165.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020165hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PHA02742 protein tyrosine phos 100.0 3.3E-70 7.2E-75 507.0 30.4 251 55-319 26-300 (303)
2 PHA02740 protein tyrosine phos 100.0 8.6E-70 1.9E-74 501.4 29.2 245 55-320 25-293 (298)
3 PHA02746 protein tyrosine phos 100.0 1E-67 2.2E-72 493.9 31.2 255 55-320 25-319 (323)
4 PHA02747 protein tyrosine phos 100.0 6.5E-68 1.4E-72 493.3 28.7 251 55-318 25-302 (312)
5 KOG0790 Protein tyrosine phosp 100.0 5.3E-69 1.1E-73 494.4 13.7 266 55-326 244-532 (600)
6 PHA02738 hypothetical protein; 100.0 3.2E-67 6.8E-72 490.0 25.8 252 55-323 25-302 (320)
7 KOG0792 Protein tyrosine phosp 100.0 7.2E-65 1.6E-69 507.1 27.6 270 40-322 855-1137(1144)
8 KOG4228 Protein tyrosine phosp 100.0 2.9E-64 6.3E-69 508.0 20.3 261 39-315 525-797 (1087)
9 smart00194 PTPc Protein tyrosi 100.0 2.4E-62 5.2E-67 446.4 27.6 244 57-312 2-257 (258)
10 KOG0793 Protein tyrosine phosp 100.0 5.3E-61 1.1E-65 460.0 18.6 283 29-322 707-1002(1004)
11 KOG0791 Protein tyrosine phosp 100.0 1.2E-58 2.6E-63 420.5 20.6 260 44-317 85-356 (374)
12 cd00047 PTPc Protein tyrosine 100.0 6.9E-57 1.5E-61 403.9 25.7 217 88-312 1-230 (231)
13 COG5599 PTP2 Protein tyrosine 100.0 6.9E-57 1.5E-61 391.8 20.7 231 77-319 44-298 (302)
14 PF00102 Y_phosphatase: Protei 100.0 1.1E-54 2.3E-59 389.1 21.2 221 86-313 1-235 (235)
15 KOG4228 Protein tyrosine phosp 100.0 9E-53 1.9E-57 424.8 17.9 276 26-316 776-1086(1087)
16 PRK15375 pathogenicity island 100.0 6.6E-49 1.4E-53 372.6 27.1 255 31-316 253-531 (535)
17 KOG0789 Protein tyrosine phosp 100.0 1.1E-46 2.3E-51 365.4 25.3 229 83-319 124-371 (415)
18 smart00404 PTPc_motif Protein 99.8 8.5E-20 1.9E-24 142.5 10.6 89 224-312 1-104 (105)
19 smart00012 PTPc_DSPc Protein t 99.8 8.5E-20 1.9E-24 142.5 10.6 89 224-312 1-104 (105)
20 PTZ00242 protein tyrosine phos 99.5 4.3E-13 9.3E-18 114.0 10.5 126 133-311 16-155 (166)
21 PTZ00393 protein tyrosine phos 99.1 4.3E-10 9.4E-15 99.3 11.1 123 133-310 92-225 (241)
22 cd00127 DSPc Dual specificity 98.7 4.3E-08 9.3E-13 80.3 7.9 72 224-302 49-120 (139)
23 KOG1720 Protein tyrosine phosp 98.7 1.9E-07 4.1E-12 80.2 10.1 75 232-312 122-206 (225)
24 COG2453 CDC14 Predicted protei 98.5 2.2E-07 4.8E-12 80.1 6.5 77 232-312 79-165 (180)
25 KOG2836 Protein tyrosine phosp 98.4 5.2E-06 1.1E-10 66.4 10.3 114 133-301 17-134 (173)
26 smart00195 DSPc Dual specifici 98.3 3.9E-06 8.4E-11 68.8 9.8 72 225-301 45-116 (138)
27 PF05706 CDKN3: Cyclin-depende 98.0 6.2E-06 1.3E-10 69.1 4.8 125 116-280 24-154 (168)
28 PF00782 DSPc: Dual specificit 98.0 3.3E-05 7.2E-10 62.7 8.3 54 241-301 58-111 (133)
29 PF03162 Y_phosphatase2: Tyros 97.8 5.2E-05 1.1E-09 64.3 6.0 71 224-301 58-128 (164)
30 PF14566 PTPlike_phytase: Inos 97.6 0.00012 2.6E-09 61.1 5.6 49 233-283 100-148 (149)
31 PRK12361 hypothetical protein; 97.2 0.00063 1.4E-08 68.7 6.0 63 235-301 152-214 (547)
32 KOG1717 Dual specificity phosp 97.0 0.0015 3.4E-08 58.3 6.0 63 246-312 241-307 (343)
33 COG5350 Predicted protein tyro 96.8 0.0046 9.9E-08 50.9 6.7 47 232-279 66-113 (172)
34 PF13350 Y_phosphatase3: Tyros 96.7 0.0036 7.9E-08 52.9 5.6 35 134-169 20-54 (164)
35 TIGR01244 conserved hypothetic 96.5 0.022 4.8E-07 46.6 9.0 52 241-301 71-122 (135)
36 KOG1718 Dual specificity phosp 96.5 0.004 8.7E-08 52.1 4.4 56 224-282 57-117 (198)
37 KOG2283 Clathrin coat dissocia 96.4 0.0026 5.6E-08 61.9 3.1 70 231-301 78-149 (434)
38 KOG1719 Dual specificity phosp 96.1 0.095 2E-06 43.4 10.3 83 236-327 87-179 (183)
39 PF04273 DUF442: Putative phos 95.7 0.024 5.1E-07 44.7 5.4 38 241-282 71-108 (110)
40 KOG1716 Dual specificity phosp 95.2 0.06 1.3E-06 49.8 7.2 37 244-283 143-179 (285)
41 COG2365 Protein tyrosine/serin 94.2 0.076 1.6E-06 48.1 5.0 25 259-283 136-160 (249)
42 PLN02727 NAD kinase 93.9 0.14 3.1E-06 53.8 6.9 40 241-282 325-364 (986)
43 KOG4471 Phosphatidylinositol 3 93.3 0.1 2.2E-06 51.8 4.4 29 255-283 370-398 (717)
44 KOG1572 Predicted protein tyro 87.4 2.1 4.5E-05 38.2 6.6 38 242-281 133-170 (249)
45 PF06602 Myotub-related: Myotu 84.7 1.7 3.8E-05 41.4 5.3 25 259-283 231-255 (353)
46 KOG1089 Myotubularin-related p 76.5 3.3 7.1E-05 41.6 4.2 23 260-282 345-367 (573)
47 COG3453 Uncharacterized protei 66.9 23 0.0005 28.3 6.1 33 241-277 72-104 (130)
48 PF02061 Lambda_CIII: Lambda P 46.9 28 0.0006 22.1 2.8 24 227-250 2-25 (45)
49 cd01518 RHOD_YceA Member of th 46.2 32 0.00069 25.8 3.9 17 260-277 62-78 (101)
50 PLN02160 thiosulfate sulfurtra 45.3 36 0.00077 27.5 4.2 16 260-276 82-97 (136)
51 cd01523 RHOD_Lact_B Member of 44.2 34 0.00073 25.6 3.7 16 260-276 62-77 (100)
52 cd05567 PTS_IIB_mannitol PTS_I 43.3 28 0.0006 25.7 3.0 17 261-278 2-18 (87)
53 COG0607 PspE Rhodanese-related 37.6 33 0.00071 25.8 2.7 17 259-276 61-77 (110)
54 PRK11493 sseA 3-mercaptopyruva 36.1 38 0.00082 31.0 3.3 50 228-279 202-251 (281)
55 cd01533 4RHOD_Repeat_2 Member 33.6 77 0.0017 24.0 4.3 14 260-274 67-80 (109)
56 KOG2386 mRNA capping enzyme, g 32.8 31 0.00068 33.3 2.2 50 232-281 93-146 (393)
57 cd01448 TST_Repeat_1 Thiosulfa 32.2 1.2E+02 0.0025 23.5 5.2 33 241-276 63-95 (122)
58 PF10727 Rossmann-like: Rossma 31.4 74 0.0016 25.6 3.9 28 244-271 80-108 (127)
59 COG5495 Uncharacterized conser 31.4 48 0.001 29.8 3.0 17 259-276 91-107 (289)
60 PF06165 Glyco_transf_36: Glyc 31.0 1.4E+02 0.003 23.1 5.4 42 190-233 48-89 (110)
61 KOG1147 Glutamyl-tRNA syntheta 30.8 11 0.00023 37.8 -1.3 28 133-160 475-502 (712)
62 PRK10310 PTS system galactitol 27.8 59 0.0013 24.5 2.6 17 261-278 4-20 (94)
63 TIGR03865 PQQ_CXXCW PQQ-depend 27.3 1.1E+02 0.0024 25.5 4.4 17 259-275 116-132 (162)
64 KOG1530 Rhodanese-related sulf 26.6 75 0.0016 25.8 3.1 28 247-275 76-104 (136)
65 TIGR00853 pts-lac PTS system, 23.8 1.1E+02 0.0024 23.1 3.4 25 260-287 4-28 (95)
66 PF14532 Sigma54_activ_2: Sigm 23.0 80 0.0017 25.2 2.8 32 244-275 6-37 (138)
67 COG2401 ABC-type ATPase fused 22.4 1.5E+02 0.0033 29.3 4.8 56 227-287 217-275 (593)
68 PF02302 PTS_IIB: PTS system, 22.4 1.1E+02 0.0023 22.3 3.2 12 262-273 2-13 (90)
69 COG5178 PRP8 U5 snRNP spliceos 21.6 85 0.0018 34.7 3.1 19 1-19 1-19 (2365)
70 cd01520 RHOD_YbbB Member of th 21.0 2E+02 0.0044 22.5 4.7 19 259-277 86-104 (128)
71 cd01519 RHOD_HSP67B2 Member of 20.6 1.8E+02 0.0038 21.6 4.1 16 259-275 66-81 (106)
72 cd01444 GlpE_ST GlpE sulfurtra 20.1 2.2E+02 0.0048 20.5 4.5 16 259-275 56-71 (96)
No 1
>PHA02742 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=3.3e-70 Score=507.04 Aligned_cols=251 Identities=29% Similarity=0.532 Sum_probs=219.9
Q ss_pred HHHHHHHHHhHhcCCCCccccccceeecCCCCCCCCCCCCCCCCCCCeEEeccCCCCCCCCCCceeeeeeecCCCCcccc
Q 020165 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQ 134 (330)
Q Consensus 55 ~~~~~Ef~~l~~~~~~~~~~~~~~~~a~~~~n~~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dYINAs~i~~~~~~~~~~ 134 (330)
..+.+||+.|..... ..+|..+..++|..||||.||+|||+|||+|+.. .+++||||||||+|+..+ ++
T Consensus 26 ~~i~~E~~~i~~~~~-----~~~~~~~~~~~N~~KNRy~~i~~~D~tRV~L~~~----~~~~dYINAsyI~g~~~~--~~ 94 (303)
T PHA02742 26 EILKEEHEHIMQEIV-----AFSCNESLELKNMKKCRYPDAPCFDRNRVILKIE----DGGDDFINASYVDGHNAK--GR 94 (303)
T ss_pred HHHHHHHHHHhcCCC-----CCchhhccChhhhhcCCCCCCCCCCCCEEEeCCC----CCCCCcEEEeeecCCCCC--Ce
Confidence 578999999975432 3578888999999999999999999999999853 246899999999998643 69
Q ss_pred eeeecCCCCCCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCC-CCcceeccceEEEEEeeeecccEEEEEEEe
Q 020165 135 FIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE-DGPREFGNIGIVTKWIKTTETALVLRNLEV 213 (330)
Q Consensus 135 yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~-~~~~~~g~~~V~~~~~~~~~~~~~~r~l~v 213 (330)
|||||||+++|++|||+|||+++|.+|||||++.|++ .++|.+|||.+ ++...||.|+|++..++. ..++++|.|.|
T Consensus 95 fIatQ~Pl~~T~~dFW~MVw~~~~~vIVmLt~~~E~g-~~kc~~YWp~~~~~~~~~g~~~V~~~~~~~-~~~~~~~~l~l 172 (303)
T PHA02742 95 FICTQAPLEETALDFWQAIFQDQVRVIVMITKIMEDG-KEACYPYWMPHERGKATHGEFKIKTKKIKS-FRNYAVTNLCL 172 (303)
T ss_pred EEEECCCCcccHHHHHHHHhhcCCCeEEEcchhhhCC-eeeccccCCCCCCCceEEEEEEEEEEEEEE-cCCEEEEEEEE
Confidence 9999999999999999999999999999999999976 58999999974 567889999999888765 46899999999
Q ss_pred eecCCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHcCC------------CCCCCEEEEcCCCCChhHHHHHHHH
Q 020165 214 NYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP------------PNFGPIVVHCSAGIGRTGAYCTIHN 281 (330)
Q Consensus 214 ~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~------------~~~~PivVHCs~GvGRtGtfiai~~ 281 (330)
++.+.+. .|.|+||||++|||+|+|.++..+++|+..+++.. ...+|||||||+|+||||||||+++
T Consensus 173 ~~~~~~~-~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~~~~~~~~~~~PIvVHCsaGvGRTGtF~aid~ 251 (303)
T PHA02742 173 TDTNTGA-SLDIKHFAYEDWPHGGLPRDPNKFLDFVLAVREADLKADVDIKGENIVKEPPILVHCSAGLDRAGAFCAIDI 251 (303)
T ss_pred EECCCCc-eEEEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHhhhccccccccccCCCCCeEEECCCCCchhHHHHHHHH
Confidence 9865554 67999999999999999999999999998775411 1237999999999999999999999
Q ss_pred HHHHHHc-CCCCHHHHHHHHH----------HHHHHHHHHHHHHHHHhh
Q 020165 282 TVQRILV-GDMSALDLANTVK----------EQYIFCHQAIVDELEDLI 319 (330)
Q Consensus 282 ~~~~l~~-~~~~v~di~~~vr----------~QY~F~y~~l~~~~~~~~ 319 (330)
+++++.. +.++++++++.|| +||.|||++|++|++.+-
T Consensus 252 ~i~~~~~~~~v~v~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~y~~~~~ 300 (303)
T PHA02742 252 CISKYNERAIIPLLSIVRDLRKQRHNCLSLPQQYIFCYFIVLIFAKLMA 300 (303)
T ss_pred HHHHHHhcCCCCHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 9999975 6789999999999 899999999999998754
No 2
>PHA02740 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=8.6e-70 Score=501.41 Aligned_cols=245 Identities=20% Similarity=0.349 Sum_probs=211.8
Q ss_pred HHHHHHHHHhHhcCCCCccccccceeecCCCCCCCCC--CCCCCCCCCCeEEeccCCCCCCCCCCceeeeeeecCCCCcc
Q 020165 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNR--YTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKV 132 (330)
Q Consensus 55 ~~~~~Ef~~l~~~~~~~~~~~~~~~~a~~~~n~~kNR--~~~i~p~D~tRV~L~~~~~~~~~~~dYINAs~i~~~~~~~~ 132 (330)
..+.+||+.|..... .+++..+.+++|..||| |.||+||||+||+|+. ++||||||||+|+..+
T Consensus 25 ~~i~~E~~~i~~~~~-----~~~~~~~~~~~n~~knr~r~~~i~~~D~sRV~L~~-------~~~YINAnyVdG~~~~-- 90 (298)
T PHA02740 25 SCIIKEYRAIVPEHE-----DEANKACAQAENKAKDENLALHITRLLHRRIKLFN-------DEKVLDARFVDGYDFE-- 90 (298)
T ss_pred HHHHHHHHHHhccCc-----cchhhhhhchhhhcccccccCCcCCccCceEEecC-------CCCcEEEEEecCCCCC--
Confidence 689999999975432 34677788899999996 6899999999999963 3589999999998654
Q ss_pred cceeeecCCCCCCHHHHHHHHHhccCCeEEEecccccCCcccccc-ccCCCCCC-cceeccceEEEEEeeeecccEEEEE
Q 020165 133 SQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCG-DYFQAEDG-PREFGNIGIVTKWIKTTETALVLRN 210 (330)
Q Consensus 133 ~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~-~YwP~~~~-~~~~g~~~V~~~~~~~~~~~~~~r~ 210 (330)
++|||||||+++|++|||+||||++|.+|||||+..| .+|. +|||.+.+ ...||+|+|++.++.. ..++++|.
T Consensus 91 ~~fIaTQ~Pl~~T~~dFW~MVwe~~~~iIVMLt~~~e----~kc~~~YWP~~~~~~~~~g~f~V~~~~~~~-~~~~~~~~ 165 (298)
T PHA02740 91 QKFICIINLCEDACDKFLQALSDNKVQIIVLISRHAD----KKCFNQFWSLKEGCVITSDKFQIETLEIII-KPHFNLTL 165 (298)
T ss_pred CcEEEecCCchhhHHHHHHHHHhcCCCEEEEcccccc----ccccccCCCCCCCCeEEECCEEEEEEEEEe-cCCEEEEE
Confidence 7999999999999999999999999999999999876 3798 99998654 4689999999887765 57899999
Q ss_pred EEeeecCCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHc---------CCCCCCCEEEEcCCCCChhHHHHHHHH
Q 020165 211 LEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYN---------LPPNFGPIVVHCSAGIGRTGAYCTIHN 281 (330)
Q Consensus 211 l~v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~---------~~~~~~PivVHCs~GvGRtGtfiai~~ 281 (330)
|.|++.. +. .|.|+||||++|||+|+|.++..+++|+..+++ .....+|||||||||+||||||||+|+
T Consensus 166 l~l~~~~-~~-~r~V~Hfqyt~WPd~gvP~~~~~~l~fi~~V~~~~~~~~~~~~~~~~~PIVVHCSaGvGRTGtFcaiDi 243 (298)
T PHA02740 166 LSLTDKF-GQ-AQKISHFQYTAWPADGFSHDPDAFIDFFCNIDDLCADLEKHKADGKIAPIIIDCIDGISSSAVFCVFDI 243 (298)
T ss_pred EEEEcCC-CC-cEEEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEECCCCCchhHHHHHHHH
Confidence 9998643 33 589999999999999999999999999876643 122358999999999999999999999
Q ss_pred HHHHHH-cCCCCHHHHHHHHH----------HHHHHHHHHHHHHHHHhhc
Q 020165 282 TVQRIL-VGDMSALDLANTVK----------EQYIFCHQAIVDELEDLIS 320 (330)
Q Consensus 282 ~~~~l~-~~~~~v~di~~~vr----------~QY~F~y~~l~~~~~~~~~ 320 (330)
+++++. .|.+++.++++.|| +||.|||++|++|++..+.
T Consensus 244 ~l~~~~~~~~vdi~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~yl~~~~~ 293 (298)
T PHA02740 244 CATEFDKTGMLSIANALKKVRQKKYGCMNCLDDYVFCYHLIAAYLKEKFD 293 (298)
T ss_pred HHHHHHhcCcccHHHHHHHHHhhCccccCCHHHHHHHHHHHHHHHHHhhc
Confidence 999996 47899999999999 9999999999999987653
No 3
>PHA02746 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=1e-67 Score=493.89 Aligned_cols=255 Identities=30% Similarity=0.526 Sum_probs=216.9
Q ss_pred HHHHHHHHHhHhcCCCCccccccceeecCCCCCCCCCCCCCCCCCCCeEEeccCCC-----------------CCCCCCC
Q 020165 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKD-----------------YRPAARG 117 (330)
Q Consensus 55 ~~~~~Ef~~l~~~~~~~~~~~~~~~~a~~~~n~~kNR~~~i~p~D~tRV~L~~~~~-----------------~~~~~~d 117 (330)
..+.+||..|..... .+++..+..+.|..||||.||+|||+|||+|....+ ...+++|
T Consensus 25 ~~~~~e~~~i~~~~~-----~~t~~~~~~~~N~~KNRy~di~p~D~sRV~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 99 (323)
T PHA02746 25 EFVLLEHAEVMDIPI-----RGTTNHFLKKENLKKNRFHDIPCWDHSRVVINAHESLKMFDVGDSDGKKIEVTSEDNAEN 99 (323)
T ss_pred HHHHHHHHHHhcCCC-----CcchhhccChhhccccCCCCCCCCcCCEEEecCCCCccccccccccccccccccCCCCCC
Confidence 578999999986543 346778889999999999999999999999986421 0134589
Q ss_pred ceeeeeeecCCCCcccceeeecCCCCCCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCCC-CcceeccceEEE
Q 020165 118 YINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAED-GPREFGNIGIVT 196 (330)
Q Consensus 118 YINAs~i~~~~~~~~~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~~-~~~~~g~~~V~~ 196 (330)
|||||||+|+.. .++|||||||+++|++|||+||||++|.+|||||++.++ ..+|.+|||.+. +...||.|.|++
T Consensus 100 YINAsyV~g~~~--~~~fIaTQ~Pl~~T~~dFW~MIwe~~v~vIVMLt~~~e~--~~kc~~YWP~~~~~~~~~g~~~V~~ 175 (323)
T PHA02746 100 YIHANFVDGFKE--ANKFICAQGPKEDTSEDFFKLISEHESQVIVSLTDIDDD--DEKCFELWTKEEDSELAFGRFVAKI 175 (323)
T ss_pred eEEEecccCCCC--CCeEEEeCCCChhhHHHHHHHHHhhCCCEEEEecccccC--CccCCCCCCCCCCCCeEEcCEEEEE
Confidence 999999999854 369999999999999999999999999999999998653 479999999864 457899999998
Q ss_pred EEeeeecccEEEEEEEeeecCCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHcC-----------CCCCCCEEEE
Q 020165 197 KWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL-----------PPNFGPIVVH 265 (330)
Q Consensus 197 ~~~~~~~~~~~~r~l~v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~-----------~~~~~PivVH 265 (330)
..... ..+++.|.|.|++...+. .|.|+||||++|||+|+|.++..+++|+..+++. +...+|||||
T Consensus 176 ~~~~~-~~~~~~~~l~l~~~~~~~-~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~~~~~~~~~~PIvVH 253 (323)
T PHA02746 176 LDIIE-ELSFTKTRLMITDKISDT-SREIHHFWFPDWPDNGIPTGMAEFLELINKVNEEQAELIKQADNDPQTLGPIVVH 253 (323)
T ss_pred EEEEE-cCCeEEEEEEEEECCCCC-ceEEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCEEEE
Confidence 87655 467899999999765554 5799999999999999999999999998876532 1123899999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHc-CCCCHHHHHHHHH----------HHHHHHHHHHHHHHHHhhc
Q 020165 266 CSAGIGRTGAYCTIHNTVQRILV-GDMSALDLANTVK----------EQYIFCHQAIVDELEDLIS 320 (330)
Q Consensus 266 Cs~GvGRtGtfiai~~~~~~l~~-~~~~v~di~~~vr----------~QY~F~y~~l~~~~~~~~~ 320 (330)
||+|+|||||||||+++++++.. +.+++.++++.|| +||.|||++|.++|.....
T Consensus 254 CsaGvGRTGtfcaid~~l~~l~~~~~vdv~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~~l~~~~~ 319 (323)
T PHA02746 254 CSAGIGRAGTFCAIDNALEQLEKEKEVCLGEIVLKIRKQRHSSVFLPEQYAFCYKALKYAIIEEAK 319 (323)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhcCCCCHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999975 6799999999999 9999999999998865443
No 4
>PHA02747 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=6.5e-68 Score=493.28 Aligned_cols=251 Identities=29% Similarity=0.457 Sum_probs=214.0
Q ss_pred HHHHHHHHHhHhcCCCCccccccceeecCCCCCCCCCCCCCCCCCCCeEEeccCCCCCCCCCCceeeeeeecCCCCcccc
Q 020165 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQ 134 (330)
Q Consensus 55 ~~~~~Ef~~l~~~~~~~~~~~~~~~~a~~~~n~~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dYINAs~i~~~~~~~~~~ 134 (330)
..+.+||+.|..... .+++..+..++|..||||.||+|||++||+|.... +..+||||||||+|+.. +++
T Consensus 25 ~~i~~E~~~i~~~~~-----~~~~~~~~~~~N~~kNRy~di~p~D~sRV~L~~~~---~~~~dYINAsyV~g~~~--~~~ 94 (312)
T PHA02747 25 GIIRDEHHQIILKPF-----DGLIANFEKPENQPKNRYWDIPCWDHNRVILDSGG---GSTSDYIHANWIDGFED--DKK 94 (312)
T ss_pred HHHHHHHHHHhcCCC-----CChhhhhhCchhhccCCCCCCCCCCCCEeEecCCC---CCCCCcEEeeeecCCCC--CCe
Confidence 578999999964321 23566778899999999999999999999998532 24689999999999864 369
Q ss_pred eeeecCCCCCCHHHHHHHHHhccCCeEEEecccc-cCCccccccccCCCC-CCcceeccceEEEEEeeeecccEEEEEEE
Q 020165 135 FIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLV-DNYKMVKCGDYFQAE-DGPREFGNIGIVTKWIKTTETALVLRNLE 212 (330)
Q Consensus 135 yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~-E~~~~~kc~~YwP~~-~~~~~~g~~~V~~~~~~~~~~~~~~r~l~ 212 (330)
|||||||+++|++|||+||||++|.+|||||++. |++ .++|.+|||.+ ++...+|+|.|++.++.. ..++++|.|+
T Consensus 95 yIaTQ~Pl~~T~~dFW~MVwe~~~~~IVMLt~~~~e~g-~~kc~~YWp~~~~~~~~~g~~~V~~~~~~~-~~~~~~~~l~ 172 (312)
T PHA02747 95 FIATQGPFAETCADFWKAVWQEHCSIIVMLTPTKGTNG-EEKCYQYWCLNEDGNIDMEDFRIETLKTSV-RAKYILTLIE 172 (312)
T ss_pred EEEeCCCcchhHHHHHHHHHhccCCEEEEcccccccCC-cccccccCCCCCCCCeEeeeEEEEEEEEEe-cCCeEEEEEE
Confidence 9999999999999999999999999999999998 654 68999999975 567889999999887765 5679999999
Q ss_pred eeecCCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHcC-----------CCCCCCEEEEcCCCCChhHHHHHHHH
Q 020165 213 VNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL-----------PPNFGPIVVHCSAGIGRTGAYCTIHN 281 (330)
Q Consensus 213 v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~-----------~~~~~PivVHCs~GvGRtGtfiai~~ 281 (330)
|++...+. .|.|+||||++|||+|+|.+...+++|+..++.. ....+|||||||+|+||||||||+++
T Consensus 173 l~~~~~~~-~r~V~h~~y~~Wpd~~~P~~~~~~l~fi~~v~~~~~~~~~~~~~~~~~~~PIvVHCsaGvGRtGtfcaidi 251 (312)
T PHA02747 173 ITDKILKD-SRKISHFQCSEWFEDETPSDHPDFIKFIKIIDINRKKSGKLFNPKDALLCPIVVHCSDGVGKTGIFCAVDI 251 (312)
T ss_pred EEECCCCC-ceEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHHHHhhccccccccCCCCEEEEecCCCcchhHHHHHHH
Confidence 99765544 6799999999999999999988888877654321 01237999999999999999999999
Q ss_pred HHHHHHc-CCCCHHHHHHHHH----------HHHHHH---HHHHHHHHHHh
Q 020165 282 TVQRILV-GDMSALDLANTVK----------EQYIFC---HQAIVDELEDL 318 (330)
Q Consensus 282 ~~~~l~~-~~~~v~di~~~vr----------~QY~F~---y~~l~~~~~~~ 318 (330)
+++++.. +.+++.++++.|| +||.|| |++|.+|+..+
T Consensus 252 ~i~~l~~~~~v~v~~~V~~lR~qR~~~Vqt~~QY~F~~~~Y~~l~~~~~~~ 302 (312)
T PHA02747 252 CLNQLVKRKAICLAKTAEKIREQRHAGIMNFDDYLFIQPGYEVLHYFLSKI 302 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999975 6799999999999 999999 99998887665
No 5
>KOG0790 consensus Protein tyrosine phosphatase Corkscrew and related SH2 domain enzymes [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-69 Score=494.35 Aligned_cols=266 Identities=35% Similarity=0.526 Sum_probs=227.3
Q ss_pred HHHHHHHHHhHhcCCCCccccccceeecCCCCCCCCCCCCCCCCCCCeEEeccCCCCCCCCCCceeeeeeecCC------
Q 020165 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSS------ 128 (330)
Q Consensus 55 ~~~~~Ef~~l~~~~~~~~~~~~~~~~a~~~~n~~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dYINAs~i~~~~------ 128 (330)
.||++||+.|++..... ..+-..+..|+|+.||||+||+|||||||+|.... .+.+++||||||||-...
T Consensus 244 ~GfwEEFesLqq~~~~~---~~sr~EG~r~eN~~KNRYkNIlPfDHtRViL~d~~-~n~pgsdYINAnyi~~~~q~~~~~ 319 (600)
T KOG0790|consen 244 AGFWEEFESLQQQEVKN---LHSRLEGQRPENKGKNRYKNILPFDHTRVILQDRD-PNIPGSDYINANYIMIEFQRLCNN 319 (600)
T ss_pred cchhHHHHHhhhhhhHh---hhhhhccccchhhccccccccCcccceeeEeecCC-CCCccchhcccchhhhhhhhccCc
Confidence 58999999998654321 23455678899999999999999999999998654 456889999999984321
Q ss_pred CCcccceeeecCCCCCCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCCCCcceeccceEEEEEeeeecccEEE
Q 020165 129 SEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVL 208 (330)
Q Consensus 129 ~~~~~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~~~~~~~ 208 (330)
..-++.||||||-|.+|+.|||+|||++|+++|||.+...|.| ..||.+|||+++....||.+.|++..+... .+|++
T Consensus 320 ~~~kKsyIAtQGCL~nTVnDFW~MvwQENsrVIVMtTkE~ERg-K~KC~~YWPee~~~e~~G~~~v~~v~E~~t-~dY~L 397 (600)
T KOG0790|consen 320 SKPKKSYIATQGCLQNTVNDFWRMVWQENSRVIVMTTKEVERG-KSKCVKYWPEEGALEEYGVMRVRNVKESDT-HDYTL 397 (600)
T ss_pred cccccceeehhhHHHHHHHHHHHHHHhccceEEEEehhhhhcc-cccccccCCcccchhhcCceEEEecccccc-cccee
Confidence 1112589999999999999999999999999999999999986 489999999887788999999999988764 68999
Q ss_pred EEEEeeecCCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHcCC---CCCCCEEEEcCCCCChhHHHHHHHHHHHH
Q 020165 209 RNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP---PNFGPIVVHCSAGIGRTGAYCTIHNTVQR 285 (330)
Q Consensus 209 r~l~v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~---~~~~PivVHCs~GvGRtGtfiai~~~~~~ 285 (330)
|+|.++....+...|.|+||||..|||||+|.++..++.|+..+.+.+ ...||||||||||+|||||||+||+++++
T Consensus 398 R~l~vs~~~~g~~~R~I~~yh~~tWPDHGvP~dPg~vLnFLe~V~~rq~~l~~AgpIvVHCSAGIGrTGTfiViD~lld~ 477 (600)
T KOG0790|consen 398 RELKVSKLGNGNLEREIWHYHYLTWPDHGVPSDPGGVLNFLEEVNHRQESLMDAGPIVVHCSAGIGRTGTFIVIDMLLDQ 477 (600)
T ss_pred hheeeccccCCcchhhhhhhheeecccCCCcCCccHHHHHHHHhhhhhccccccCcEEEEccCCcCCcceEEEhHHHHHH
Confidence 999999766666678999999999999999999999999999886543 23489999999999999999999999999
Q ss_pred HHc-C---CCCHHHHHHHHH----------HHHHHHHHHHHHHHHHhhcCCCccc
Q 020165 286 ILV-G---DMSALDLANTVK----------EQYIFCHQAIVDELEDLISGFNSER 326 (330)
Q Consensus 286 l~~-~---~~~v~di~~~vr----------~QY~F~y~~l~~~~~~~~~~~~~~~ 326 (330)
|++ | ++|+...++.|| .||.|+|.||.+||+.+....+.++
T Consensus 478 I~~~Gldc~iDi~ktIqmVRsqRSGmVQTEaQYkFiY~Avqhyietl~~r~e~eq 532 (600)
T KOG0790|consen 478 IREKGLDCDIDIQKTIQMVRSQRSGMVQTEAQYKFIYVAVQHYIETLQKRIEEEQ 532 (600)
T ss_pred HHhcCCCCcccHHHHHHHHHHHhcchhhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 975 4 467777777777 8999999999999998887655443
No 6
>PHA02738 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-67 Score=489.96 Aligned_cols=252 Identities=28% Similarity=0.484 Sum_probs=213.7
Q ss_pred HHHHHHHHHhHhcCCCCccccccceeecCCCCCCCCCCCCCCCCCCCeEEeccCCCCCCCCCCceeeeeeecCCCCcccc
Q 020165 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQ 134 (330)
Q Consensus 55 ~~~~~Ef~~l~~~~~~~~~~~~~~~~a~~~~n~~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dYINAs~i~~~~~~~~~~ 134 (330)
..+.+||+.|..... .+++..+. .|..||||.||+|||++||+|+.. .+++||||||||+|+..+ ++
T Consensus 25 ~~i~~E~~~i~~~~~-----~~t~~~~~--~N~~kNR~~~v~~~d~sRV~L~~~----~~~~dYINAsyVdg~~~~--~k 91 (320)
T PHA02738 25 EVITREHQKVISEKV-----DGTFNAEK--KNRKLNRYLDAVCFDHSRVILPAE----RNRGDYINANYVDGFEYK--KK 91 (320)
T ss_pred HHHHHHHHHHhcCCC-----CcchhHHH--HhhhhCCCCCcCCCcCCEEEeCCC----CCCCCceEeEEecCCCCC--ce
Confidence 578899999864432 12343333 399999999999999999999743 246899999999998653 69
Q ss_pred eeeecCCCCCCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCC-CCcceeccceEEEEEeeeecccEEEEEEEe
Q 020165 135 FIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE-DGPREFGNIGIVTKWIKTTETALVLRNLEV 213 (330)
Q Consensus 135 yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~-~~~~~~g~~~V~~~~~~~~~~~~~~r~l~v 213 (330)
|||||||+++|++|||+||||++|.+|||||+..|++ ..+|.+|||.+ ++...+|+|+|++..+.. ..+++.|.|.|
T Consensus 92 fI~TQ~Pl~~T~~dFW~MVwe~~v~~IVmL~~~~E~~-~~kc~~YWp~~~~~~~~~g~f~V~~~~~~~-~~~~~~~~l~l 169 (320)
T PHA02738 92 FICGQAPTRQTCYDFYRMLWMEHVQIIVMLCKKKENG-REKCFPYWSDVEQGSIRFGKFKITTTQVET-HPHYVKSTLLL 169 (320)
T ss_pred eEEecCCChHHHHHHHHHHHHhCCcEEEEeeehhhCC-eeeccccCCCCCCCceEeccEEEEEEEEEe-cCCeEEEEEEE
Confidence 9999999999999999999999999999999999875 58999999985 567889999999988776 56899999999
Q ss_pred eecCCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHcCC--------------CCCCCEEEEcCCCCChhHHHHHH
Q 020165 214 NYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP--------------PNFGPIVVHCSAGIGRTGAYCTI 279 (330)
Q Consensus 214 ~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~--------------~~~~PivVHCs~GvGRtGtfiai 279 (330)
++.. + ..|.|+||||++|||+|+|.++..+++++..+++.. ...+|||||||+|+||||||||+
T Consensus 170 ~~~~-~-~~r~V~h~~y~~Wpd~gvP~~~~~~l~fi~~V~~~~~~~~~~~~~~~~~~~~~~PIVVHCs~GiGRtGtFcai 247 (320)
T PHA02738 170 TDGT-S-ATQTVTHFNFTAWPDHDVPKNTSEFLNFVLEVRQCQKELAQESLQIGHNRLQPPPIVVHCNAGLGRTPCYCVV 247 (320)
T ss_pred EeCC-C-CcEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhhhcccCccccCCCCeEEEcCCCCChhhhhhHH
Confidence 8743 3 357999999999999999999999999987765310 11379999999999999999999
Q ss_pred HHHHHHHHc-CCCCHHHHHHHHH----------HHHHHHHHHHHHHHHHhhcCCC
Q 020165 280 HNTVQRILV-GDMSALDLANTVK----------EQYIFCHQAIVDELEDLISGFN 323 (330)
Q Consensus 280 ~~~~~~l~~-~~~~v~di~~~vr----------~QY~F~y~~l~~~~~~~~~~~~ 323 (330)
|++++++.. +.+++.++++.|| +||.|||++|++|+........
T Consensus 248 di~i~~~~~~~~vdv~~~V~~lR~qR~~~vqt~~QY~F~y~~l~~y~~~~~~~~~ 302 (320)
T PHA02738 248 DISISRFDACATVSIPSIVSSIRNQRYYSLFIPFQYFFCYRAVKRYVNLTVNKVS 302 (320)
T ss_pred HHHHHHHHhcCCcCHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCchhh
Confidence 999999975 6799999999999 9999999999999977655433
No 7
>KOG0792 consensus Protein tyrosine phosphatase PTPMEG, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-65 Score=507.05 Aligned_cols=270 Identities=34% Similarity=0.572 Sum_probs=240.3
Q ss_pred HHHHHHHHHHhhcchHHHHHHHHHhHhcCCCCccccccceeecCCCCCCCCCCCCCCCCCCCeEEeccCCCCCCCCCCce
Q 020165 40 SEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYI 119 (330)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~Ef~~l~~~~~~~~~~~~~~~~a~~~~n~~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dYI 119 (330)
.+.+..|++.+..+ ++..||+.|.+.. | ...|.+|..|+|..||||+||+|||.|||.|.+..+ ....||
T Consensus 855 dks~~~L~~~L~~g--~v~~efE~i~rkk--p---~~~~~~a~lpeN~~KNRyrdvlPYD~tRV~L~~~~~---~nagYI 924 (1144)
T KOG0792|consen 855 DKSCIILAQGLEDG--MVFTEFEQIYRKK--P---GMACSIARLPENAPKNRYRDVLPYDDTRVELQPSKD---NNAGYI 924 (1144)
T ss_pred hhHHHHHHhhhhcC--chHHHHHHHhhhC--C---CceeeeccccccccccccCCcCCCcCceeeeccCCC---CCcccc
Confidence 34457778888774 7888999998655 3 347999999999999999999999999999997654 367999
Q ss_pred eeeeeecCCCCcccceeeecCCCCCCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCC-CCcceeccceEEEEE
Q 020165 120 NASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE-DGPREFGNIGIVTKW 198 (330)
Q Consensus 120 NAs~i~~~~~~~~~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~-~~~~~~g~~~V~~~~ 198 (330)
|||+|+.+.++..+.|||||||++.|+.|||+||||+++.+|||||..+|.| +.||++|||.. .+++.||.|.|++..
T Consensus 925 NAS~i~ipvgg~e~~YIA~QGPLp~T~~DFWQMVWEQ~~~lIvMlT~e~Egg-R~KchqYWPr~~~~t~~ygrf~v~~~~ 1003 (1144)
T KOG0792|consen 925 NASHIEIPVGGIENRYIACQGPLPHTCTDFWQMVWEQGSTLIVMLTTEVEGG-RVKCHQYWPRLGHETMEYGRFQVTCVF 1003 (1144)
T ss_pred cceeeEeeecceeEEEEEecCCCcchHHHHHHHHHhcCceEEEEEeehhhcC-eeccccccCCCCccceeccceEEEEEE
Confidence 9999999977777899999999999999999999999999999999999976 69999999986 567899999999999
Q ss_pred eeeecccEEEEEEEeeecCCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHcCCCC-CCCEEEEcCCCCChhHHHH
Q 020165 199 IKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPN-FGPIVVHCSAGIGRTGAYC 277 (330)
Q Consensus 199 ~~~~~~~~~~r~l~v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~~~-~~PivVHCs~GvGRtGtfi 277 (330)
... ...|+.|.|+|.+..+++ .|+|+|+||+.|||||+|+++..|++|+..++..... ..|||||||||+||||++|
T Consensus 1004 ~~~-t~~y~tr~m~l~~~~t~e-eR~V~hLQYtaWPDHg~P~D~~~FL~FleevrsvR~~t~pPilvHCSAGiGRTGVlI 1081 (1144)
T KOG0792|consen 1004 EQQ-TTCYVTREMTLKDLQTRE-ERTVWHLQYTAWPDHGVPDDPNDFLDFLEEVRSVRRGTNPPILVHCSAGIGRTGVLI 1081 (1144)
T ss_pred ecc-cccEEEEeEEEeeccCCc-eeeeeeeeecccccCCCCCChHHHHHHHHHHHHHhccCCCCeEEEccCCCCcceehH
Confidence 876 578999999999988776 5699999999999999999999999999998876554 4699999999999999999
Q ss_pred HHHHHHHHHHc-CCCCHHHHHHHHH----------HHHHHHHHHHHHHHHHhhcCC
Q 020165 278 TIHNTVQRILV-GDMSALDLANTVK----------EQYIFCHQAIVDELEDLISGF 322 (330)
Q Consensus 278 ai~~~~~~l~~-~~~~v~di~~~vr----------~QY~F~y~~l~~~~~~~~~~~ 322 (330)
.++.++..|.. +.+++.||+++|| .||.|||++|+.++++.....
T Consensus 1082 l~e~~l~lle~Ne~vdi~divr~mR~QR~~mVQT~~QYkFVyevil~~l~~~~l~~ 1137 (1144)
T KOG0792|consen 1082 LMETALCLLEHNEPVDILDIVRTMRDQRAMMVQTLSQYKFVYEVILRVLKRGRLIP 1137 (1144)
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhccchHHhhHHHHHHHHHHHhccccc
Confidence 99999999975 5799999999999 899999999999998765443
No 8
>KOG4228 consensus Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-64 Score=507.98 Aligned_cols=261 Identities=31% Similarity=0.583 Sum_probs=232.3
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHhHhcCCCCccccccceeecCCCCCCCCCCCCCCCCCCCeEEeccCCCCCCCCCCc
Q 020165 39 CSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGY 118 (330)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~Ef~~l~~~~~~~~~~~~~~~~a~~~~n~~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dY 118 (330)
..+++++++.+..+...+|.+||+.|... ..++..+.+.+|..||||.||++|||+||+|....+ .+++||
T Consensus 525 v~dl~~~i~~~~~~~~~~F~~Eyesl~~~-------~~~~~~s~~~en~~KNRY~nilayD~sRV~L~~i~G--d~~sDY 595 (1087)
T KOG4228|consen 525 VADLLEHIERRKADDGYGFKQEYESLPEG-------QFTWEHSNKKENKQKNRYENILAYDHSRVILPPIEG--DPNSDY 595 (1087)
T ss_pred HHHHHHHHHHhhcccccchHHHHhhcccc-------CCccccCccccccccccCCcchhhhcceeeecccCC--Cccccc
Confidence 34556777777666557999999999754 135667788999999999999999999999998765 567899
Q ss_pred eeeeeeecCCCCcccceeeecCCCCCCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCCCCcceeccceEEEEE
Q 020165 119 INASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKW 198 (330)
Q Consensus 119 INAs~i~~~~~~~~~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~~~~~~~g~~~V~~~~ 198 (330)
||||||+|+.. +++|||||||+++|+.||||||||+++.+|||++.+.|.+ +.||.+||| .++..||++.|++..
T Consensus 596 INAnyIdGy~e--~n~yIaaQgP~~eTv~DFWRMVWEq~S~~IVMvTnl~E~~-r~kC~qYWP--~~t~~yGdi~V~~~~ 670 (1087)
T KOG4228|consen 596 INANYIDGYKE--PNAYIAAQGPRPETVGDFWRMVWEQKSAGIVMVTNLEEFS-RVKCAQYWP--EGTETYGDIKVTLVQ 670 (1087)
T ss_pred eeeeeeecccc--cccceeccCCcccchHHHHHHheeccCCcEEEEecccccc-cccccccCC--CCcccccccccccee
Confidence 99999999964 4799999999999999999999999999999999999975 689999999 688899999999988
Q ss_pred eeeecccEEEEEEEeeecCCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHcCCC-CCCCEEEEcCCCCChhHHHH
Q 020165 199 IKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPP-NFGPIVVHCSAGIGRTGAYC 277 (330)
Q Consensus 199 ~~~~~~~~~~r~l~v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~~-~~~PivVHCs~GvGRtGtfi 277 (330)
.+. ..+|.+|+|.|...+... .|.|+||||++|||+|+|..+..++.|+++++...+ ..||||||||||+||||+|+
T Consensus 671 ~~~-~a~y~iRtf~l~~~g~~~-~R~v~qfhFt~Wpd~gvPe~~t~lL~f~rrvk~~~p~~aGPiVVHCSAGvGRTG~fi 748 (1087)
T KOG4228|consen 671 TKP-LAEYGIRTFALKKQGENP-KREVRQFHFTAWPDHGVPETPTGLLKFRRRVKTFNPPDAGPIVVHCSAGVGRTGCFI 748 (1087)
T ss_pred eee-eccceEEeeeccccCCCC-CceeeeeeeccCCCCCCcccchHHHHHHHHhccCCCcCCCCEEEECCCCCCCcceEE
Confidence 876 578999999999776655 679999999999999999999999999999998763 44999999999999999999
Q ss_pred HHHHHHHHHHc-CCCCHHHHHHHHH----------HHHHHHHHHHHHHH
Q 020165 278 TIHNTVQRILV-GDMSALDLANTVK----------EQYIFCHQAIVDEL 315 (330)
Q Consensus 278 ai~~~~~~l~~-~~~~v~di~~~vr----------~QY~F~y~~l~~~~ 315 (330)
+||.+++++.. +.+++++-+.++| +||.|||++|+++.
T Consensus 749 ~iDaml~~~~~e~~vdiy~~v~~lR~QR~~mVQt~eQYiFi~~AllE~~ 797 (1087)
T KOG4228|consen 749 VIDAMLDRLECEGKVDIYGHVKTLRRQRNNMVQTEEQYIFIHEALLEAC 797 (1087)
T ss_pred EeHHHHHHHHhhCccceechhHHHHhccccccccHHHHHHHHHHHHHHH
Confidence 99999999974 7899999999999 99999999999865
No 9
>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain.
Probab=100.00 E-value=2.4e-62 Score=446.38 Aligned_cols=244 Identities=38% Similarity=0.694 Sum_probs=215.6
Q ss_pred HHHHHHHhHhcCCCCccccccceeecCCCCCCCCCCCCCCCCCCCeEEeccCCCCCCCCCCceeeeeeecCCCCccccee
Q 020165 57 ISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFI 136 (330)
Q Consensus 57 ~~~Ef~~l~~~~~~~~~~~~~~~~a~~~~n~~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dYINAs~i~~~~~~~~~~yI 136 (330)
+.+||+.|.+.... ..++..+..++|..||||.||+|+|++||+|....+ +++||||||||+|+..+ ++||
T Consensus 2 ~~~e~~~i~~~~~~----~~~~~~~~~~~n~~kNR~~~v~~~d~~RV~l~~~~~---~~~~YInAs~v~~~~~~--~~fI 72 (258)
T smart00194 2 LEEEFEKLDRLKPD----DESCTVAARPENRDKNRYKDVLPYDHTRVKLTPPPG---EGSDYINASYIDGPNGP--KAYI 72 (258)
T ss_pred hHHHHHHhhccCCC----CccccccCCccccccCCCCCCCCCCCCEeEccCCCC---CCCCceeeeeEecCCCc--cceE
Confidence 67899999865432 246778889999999999999999999999985331 46899999999998543 6999
Q ss_pred eecCCCCCCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCCCCcceeccceEEEEEeeeecccEEEEEEEeeec
Q 020165 137 ATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYK 216 (330)
Q Consensus 137 ~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~~~~~~~r~l~v~~~ 216 (330)
+||+|+++|++|||+|||++++.+||||++..|.+ ..+|.+|||.+.+...||.|+|++.+... ..++++|+|+|++.
T Consensus 73 ~tQ~P~~~t~~dFW~mv~~~~~~~IVmL~~~~e~~-~~~~~~Ywp~~~~~~~~g~~~V~~~~~~~-~~~~~~~~l~v~~~ 150 (258)
T smart00194 73 ATQGPLPSTVEDFWRMVWEEKVTTIVMLTELEEKG-REKCAQYWPEEEEPLTYGDITVTLKSVEK-VDDYTIRTLEVTNT 150 (258)
T ss_pred EeCCCchHHHHHHHHHHHhcCCCEEEEeccceeCC-EeeccccCCCCCCcceECCEEEEEEEEEe-cCCEEEEEEEEEEC
Confidence 99999999999999999999999999999999875 58999999987777899999999998876 47899999999987
Q ss_pred CCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHcCCCC-CCCEEEEcCCCCChhHHHHHHHHHHHHHHc-CCCCHH
Q 020165 217 ESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPN-FGPIVVHCSAGIGRTGAYCTIHNTVQRILV-GDMSAL 294 (330)
Q Consensus 217 ~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~~~-~~PivVHCs~GvGRtGtfiai~~~~~~l~~-~~~~v~ 294 (330)
+.+. ++.|+||||.+|||+++|.+...++++++.++..... .+||+|||++|+||||+|||++++++++.. +.+++.
T Consensus 151 ~~~~-~~~v~~~~y~~W~d~~~P~~~~~~~~~i~~v~~~~~~~~~pivVHC~~G~gRsg~f~a~~~~~~~l~~~~~v~v~ 229 (258)
T smart00194 151 GCSE-TRTVTHYHYTNWPDHGVPESPKSILDLVRAVRKSQSTSTGPIVVHCSAGVGRTGTFIAIDILLQQLEAGKEVDIF 229 (258)
T ss_pred CCCC-cEEEEEEeeCCCCCCCCCCCHHHHHHHHHHHHHhhccCCCCEEEEeCCCCCccchhhHHHHHHHHHHHcCCCCHH
Confidence 6544 6799999999999999999999999999988765432 489999999999999999999999999975 578999
Q ss_pred HHHHHHH----------HHHHHHHHHHH
Q 020165 295 DLANTVK----------EQYIFCHQAIV 312 (330)
Q Consensus 295 di~~~vr----------~QY~F~y~~l~ 312 (330)
++++.|| +||.|||.+|+
T Consensus 230 ~~v~~lR~~R~~~v~~~~Qy~f~~~~l~ 257 (258)
T smart00194 230 EIVKELRSQRPGMVQTEEQYIFLYRAIL 257 (258)
T ss_pred HHHHHHHhccccccCCHHHHHHHHHHHh
Confidence 9999999 89999999986
No 10
>KOG0793 consensus Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-61 Score=460.04 Aligned_cols=283 Identities=29% Similarity=0.515 Sum_probs=252.6
Q ss_pred CCCCHHHHhHHHHHHHHHHHHhhcchHHHHHHHHHhHhcCCCCccccccceeecCCCCCCCCCCCCCCCCCCCeEEeccC
Q 020165 29 ISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQC 108 (330)
Q Consensus 29 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~Ef~~l~~~~~~~~~~~~~~~~a~~~~n~~kNR~~~i~p~D~tRV~L~~~ 108 (330)
+.++...+...+..|++++..+.++ ..|+.||+.|...+..| .++..+..++|..|||..+++||||+||.|+..
T Consensus 707 pA~~nmDISTGHmiLsymedhLrnk-~rlekeWealc~YqaEp----n~r~~aq~e~~a~kNR~~a~LpyDhsrV~l~~~ 781 (1004)
T KOG0793|consen 707 PAQSNMDISTGHMILSYMEDHLRNK-NRLEKEWEALCAYQAEP----NSRFVAQREENAPKNRSLAVLPYDHSRVLLKAE 781 (1004)
T ss_pred ccccccccccchhHHHHHHHHhhCc-hHHHHHHHHHHHhhcCc----chhhhhcccccccccCCCCccccccceeeeccc
Confidence 4566668888999999999999987 88999999999877554 467888999999999999999999999999854
Q ss_pred CCCCCCCCCceeeeeeecCCCCcccceeeecCCCCCCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCCCCcce
Q 020165 109 KDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPRE 188 (330)
Q Consensus 109 ~~~~~~~~dYINAs~i~~~~~~~~~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~~~~~~ 188 (330)
. ..+.+||||||+|...++.. ..|||||||+++|+.|||+||||++|.+|||||.+.|++ ...|..|||.+ |+..
T Consensus 782 ~--s~s~~dYiNAS~I~DhDPR~-paYIAtQgPl~stiA~FWQmvWe~G~~vIV~Lt~l~Eng-v~qc~rYWPde-Gsel 856 (1004)
T KOG0793|consen 782 N--SHSHSDYINASPIMDHDPRN-PAYIATQGPLPSTIADFWQMVWESGCVVIVMLTPLAENG-VRQCYRYWPDE-GSEL 856 (1004)
T ss_pred c--CccccccccccccccCCCCc-cceeeccCCCchHHHHHHHHHHHcCcEEEEEecChhhcc-hhhhhhcCCCC-Ccce
Confidence 3 46788999999999887654 699999999999999999999999999999999999986 67899999985 6678
Q ss_pred eccceEEEEEeeeecccEEEEEEEeeecCCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHcC-CCCCCCEEEEcC
Q 020165 189 FGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL-PPNFGPIVVHCS 267 (330)
Q Consensus 189 ~g~~~V~~~~~~~~~~~~~~r~l~v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~-~~~~~PivVHCs 267 (330)
|+-|.|.++++.....+|.+|.|.+++..+++ .|+|++|||.+||+.|+|.+..++++|-++++++ .....|||||||
T Consensus 857 yhiyEV~LVSEHIWceDfLVRSFYLKNlqtse-TRTvTQFHfLSWp~egvPasarslLdFRRKVNK~YRGRScpIiVH~s 935 (1004)
T KOG0793|consen 857 YHIYEVNLVSEHIWCEDFLVRSFYLKNLQTSE-TRTVTQFHFLSWPDEGVPASARSLLDFRRKVNKCYRGRSCPIIVHCS 935 (1004)
T ss_pred eeeEEeeeehhhhhhhhHHHHHHHHhhccccc-ceeeeeeeeecccccCCccchHHHHHHHHHhhhhccCCCCceEEEcc
Confidence 99999999999888889999999999988877 6799999999999999999999999999999874 445689999999
Q ss_pred CCCChhHHHHHHHHHHHHHHcC--CCCHHHHHHHHH----------HHHHHHHHHHHHHHHHhhcCC
Q 020165 268 AGIGRTGAYCTIHNTVQRILVG--DMSALDLANTVK----------EQYIFCHQAIVDELEDLISGF 322 (330)
Q Consensus 268 ~GvGRtGtfiai~~~~~~l~~~--~~~v~di~~~vr----------~QY~F~y~~l~~~~~~~~~~~ 322 (330)
+|.|||||+|+||+++.+|.+| ++|+.-.+..+| +||.|.+.+|++.+..+|+..
T Consensus 936 dGaGRTG~YiliDmvl~Rm~kGakeIDIaATlEHlRDQR~GmVaTkdQFef~l~aVAeEVnaiLKal 1002 (1004)
T KOG0793|consen 936 DGAGRTGTYILIDMVLNRMAKGAKEIDIAATLEHLRDQRPGMVATKDQFEFALTAVAEEVNAILKAL 1002 (1004)
T ss_pred CCCCccceeeeHHHHHHHHhccchhhhHHHHHHHHhhcCCcceeehhhhHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999876 567777777777 999999999999998888753
No 11
>KOG0791 consensus Protein tyrosine phosphatase, contains fn3 domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-58 Score=420.52 Aligned_cols=260 Identities=34% Similarity=0.628 Sum_probs=226.1
Q ss_pred HHHHHHhhcchHHHHHHHHHhHhcCCCCccccccceeecCCCCCCCCCCCCCCCCCCCeEEeccCCCCCCCCCCceeeee
Q 020165 44 SFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASL 123 (330)
Q Consensus 44 ~~~~~~~~~~~~~~~~Ef~~l~~~~~~~~~~~~~~~~a~~~~n~~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dYINAs~ 123 (330)
.+++......+-++.+||++|...... .++..|..+.|..||||.||+|||++||+|.+..+ .+++|||||||
T Consensus 85 ~~~~~~~~dsn~~f~eey~~lk~~g~~-----~~~~aA~l~~n~~knr~~nilpYd~Srvkl~~~~e--~~~~DYinA~~ 157 (374)
T KOG0791|consen 85 LHVKKMSADSNYKFSEEYNELKLVGLD-----QSKLAALLPLNRPKNRYTNILPYDNSRVKLSPVNE--EEGSDYINASY 157 (374)
T ss_pred hhhhhcccccchhhHHHHhhhhhhccc-----chhhhhhcCCCCCcCCcCCCCCcccccceeccccc--cchhhhhhhhh
Confidence 445555555567899999999855432 24567888999999999999999999999997654 67889999999
Q ss_pred eecCCCCcccceeeecCCCCCCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCCCCcceeccceEEEEEeeeec
Q 020165 124 ISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTE 203 (330)
Q Consensus 124 i~~~~~~~~~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~~ 203 (330)
+.|+.++ +.|||||||+++|.++||+||||+++.+|||||...|.+ +.||..|||.+.....||+++|....+.. -
T Consensus 158 ~Pg~~s~--~~fIAtQGPlp~t~~~fW~mvwq~~~~~IVmlt~~~e~~-R~kc~~ywP~~~~~~~~gdi~V~~v~e~~-~ 233 (374)
T KOG0791|consen 158 IPGYNSP--REFIATQGPLPETRDDFWKMVWQQKSHIIVMLTKCNEKG-RVKCDEYWPDEEVPVAYGDITVTMVSEES-L 233 (374)
T ss_pred cCCCCCc--ceEEEeeCCCCCChhHHHHHHHHhhcceEEEEeeccccc-chhhhhhcccccccceeccEEEEEechhh-c
Confidence 9998765 699999999999999999999999999999999999976 68999999998777899999999998865 5
Q ss_pred ccEEEEEEEeeecCCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHcCC-CCCCCEEEEcCCCCChhHHHHHHHHH
Q 020165 204 TALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP-PNFGPIVVHCSAGIGRTGAYCTIHNT 282 (330)
Q Consensus 204 ~~~~~r~l~v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~-~~~~PivVHCs~GvGRtGtfiai~~~ 282 (330)
.++.+|.|.+.. .+. +|.++||||..|||+|+|..+..++.+++.+++.- ...+|++||||+|+||||||+|++.+
T Consensus 234 ~~w~ir~~~l~~--~~~-sr~ir~f~y~~wPd~gvp~~~~sl~~f~~~~r~~~~~~~~p~iVhCSAGVgRTGTFiald~L 310 (374)
T KOG0791|consen 234 DEWTIREFRLNY--AGE-SRKIRHFHYTAWPDFGVPSSTESLLQFVRMVRQSLDTSKGPTIVHCSAGVGRTGTFIALDRL 310 (374)
T ss_pred CCceEEEEeeec--ccc-cceeEEEEEeeccccCCCCCchhHHHHHHHHHhhcccCCCceeEEeecccccccchHhHHHH
Confidence 789999999982 222 46999999999999999988899999999887653 33579999999999999999999999
Q ss_pred HHHHHcC-CCCHHHHHHHHH----------HHHHHHHHHHHHHHHH
Q 020165 283 VQRILVG-DMSALDLANTVK----------EQYIFCHQAIVDELED 317 (330)
Q Consensus 283 ~~~l~~~-~~~v~di~~~vr----------~QY~F~y~~l~~~~~~ 317 (330)
++++..+ .+++++|+..+| +||.|+|+++++.+..
T Consensus 311 Lqq~~~~~~vdi~~iv~~lR~~R~~mVqte~Qyvfl~~c~~~~l~~ 356 (374)
T KOG0791|consen 311 LQQIDSEETVDIFGVVLELRSARMLMVQTEDQYVFLHQCVLESLQG 356 (374)
T ss_pred HHHhcccccccHHHHHHHhhhccccccchHHHHHHHHHHHHHHHhC
Confidence 9999864 689999999999 9999999999986644
No 12
>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.
Probab=100.00 E-value=6.9e-57 Score=403.90 Aligned_cols=217 Identities=42% Similarity=0.744 Sum_probs=193.2
Q ss_pred CCCCCCCCCCCCCCeEEeccCCCCCCCCCCceeeeeeecCCCCcccceeeecCCCCCCHHHHHHHHHhccCCeEEEeccc
Q 020165 88 SKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRL 167 (330)
Q Consensus 88 ~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dYINAs~i~~~~~~~~~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~ 167 (330)
+||||+|++|||++||+|.... .+.+||||||||+|+..+ ++||+||+|+.+|++|||+|||++++.+||||++.
T Consensus 1 ~knR~~~~~~~d~~rV~l~~~~---~~~~~yinA~~v~~~~~~--~~fI~tQ~P~~~t~~~FW~mv~~~~~~~IV~l~~~ 75 (231)
T cd00047 1 KKNRYKDILPYDHTRVKLKPDD---DEGSDYINASYIDGYNPP--KAYIATQGPLPNTVEDFWRMVWEQKVPVIVMLTEL 75 (231)
T ss_pred CCCCCCCCCCCCCCEEEccCCC---CCCCCcEEeeeEecCCCC--cceEEcCCCChhhHHHHHHHHHhcCCCEEEEcccc
Confidence 5899999999999999998532 256899999999998643 69999999999999999999999999999999999
Q ss_pred ccCCccccccccCCCCCCcceeccceEEEEEeeeecccEEEEEEEeeecCCCCCceEEEEEecCCCCCCCCCCChHHHHH
Q 020165 168 VDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVRE 247 (330)
Q Consensus 168 ~E~~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~~~~~~~r~l~v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~ 247 (330)
.|.+ .++|.+|||.+.+...||.|+|++.++.. ..+++.|+|+|+..+.+. ++.|+||||.+|||+++|.+...+++
T Consensus 76 ~e~~-~~~~~~Ywp~~~~~~~~g~~~V~~~~~~~-~~~~~~~~l~i~~~~~~~-~~~V~~~~~~~W~d~~~p~~~~~~~~ 152 (231)
T cd00047 76 VEKG-REKCAQYWPEEEGSLTYGDITVTLVSEEK-LDDYTVRTLKLSNTGTGE-TRTVTHFQYTGWPDHGVPESPDSLLD 152 (231)
T ss_pred ccCC-CccCccCCCCCCCCeEecCEEEEEEEEEE-cCCEEEEEEEEEECCCCC-ceEEEEEeECCCCCCCccCChHHHHH
Confidence 8865 57999999987677899999999998876 478999999999876444 67999999999999999999888999
Q ss_pred HHHHHHcCC--CCCCCEEEEcCCCCChhHHHHHHHHHHHHHHc-CCCCHHHHHHHHH----------HHHHHHHHHHH
Q 020165 248 ILKRIYNLP--PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILV-GDMSALDLANTVK----------EQYIFCHQAIV 312 (330)
Q Consensus 248 ~~~~~~~~~--~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~-~~~~v~di~~~vr----------~QY~F~y~~l~ 312 (330)
++..++... ...+||+|||++|+||||+|||++++++++.. +.+++.++++.|| +||.|||++++
T Consensus 153 ~~~~v~~~~~~~~~~pivVHC~~G~gRsg~~~a~~~~~~~~~~~~~~~~~~~v~~iR~~R~~~v~~~~Qy~f~~~~l~ 230 (231)
T cd00047 153 LLRKVRKSQQQPGSGPIVVHCSAGVGRTGTFIAIDILLQRLEAEGVVDIFQTVKELRSQRPGMVQTEEQYIFLYRAIL 230 (231)
T ss_pred HHHHHHHHhccCCCCCeEEECCCCCCccchHHHHHHHHHHHHhcCCCCHHHHHHHHHhccccccCCHHHHHHHHHHHh
Confidence 998887653 22489999999999999999999999999875 5789999999999 89999999986
No 13
>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-57 Score=391.85 Aligned_cols=231 Identities=32% Similarity=0.548 Sum_probs=189.9
Q ss_pred cceeecCCCCCCCCCCCCCCCCCCCeEEeccCCCCCCCCCCceeeeeeecCCCCcccceeeecCCCCCCHHHHHHHHHhc
Q 020165 77 GCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQY 156 (330)
Q Consensus 77 ~~~~a~~~~n~~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dYINAs~i~~~~~~~~~~yI~tQ~Pl~~T~~dFW~MV~e~ 156 (330)
++...+.+.|..||||.||+||++|||.|... .+.+||||||||+... .+|||||||+++|++|||+|||++
T Consensus 44 s~~~sls~~~~~rNRYsnIvPYe~tRV~Lk~~----k~~~DYINAS~ik~~~----~~yIAtQgP~~~t~ddFW~mvw~n 115 (302)
T COG5599 44 SDDTSLSSTNYARNRYSNIVPYEHTRVHLKYG----KSINDYINASYIKTPR----GKYIATQGPKPETIDDFWKMVWHN 115 (302)
T ss_pred ccccccCccccccccccccccccCceeeccCC----CchhhcccceeeecCC----CceEEecCCCCchHHHHHHHHHhc
Confidence 34456778899999999999999999999854 2578999999999975 269999999999999999999999
Q ss_pred cC--CeEEEecccccCCccccccccCCCC-CCcceeccceEEEEEeeee-cccEEEEEEEeeecCCCCCceEEEEEecCC
Q 020165 157 HC--PVIVMLTRLVDNYKMVKCGDYFQAE-DGPREFGNIGIVTKWIKTT-ETALVLRNLEVNYKESEEPPMSVLHIQYPE 232 (330)
Q Consensus 157 ~v--~~IVmL~~~~E~~~~~kc~~YwP~~-~~~~~~g~~~V~~~~~~~~-~~~~~~r~l~v~~~~~~~~~r~v~h~~~~~ 232 (330)
.. .+||||+++.|-+ ++||.+|||.. ++...+|...+..++.+.. ...+.++.++++..++ . ++.|+||||.+
T Consensus 116 ~~~~gvIVmLt~l~E~~-rekc~qYWp~~~~~~~~~G~~v~~~~~~e~~~d~~~~~~~f~L~~~~~-~-~k~Ihhf~y~n 192 (302)
T COG5599 116 VPNNGVIVMLTSLPEYN-REKCDQYWPLGYDDTLIIGLRVIKQKKYELFNDNIVNVHNFELTSING-P-PKKIHHFQYIN 192 (302)
T ss_pred CCCceEEEEecChHHHh-HHHHhhhCCCCcCcceeeeeEEEEEecccccccceeeeeecccccCCC-C-ccEEEEEEecC
Confidence 88 8999999999976 68999999964 4556788655555544432 2446789999987663 3 46999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHc---C-------CCCHHHHHHHHH-
Q 020165 233 WPDHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILV---G-------DMSALDLANTVK- 301 (330)
Q Consensus 233 Wpd~~vP~~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~---~-------~~~v~di~~~vr- 301 (330)
|+|.+.| +...+.++++.+...+-+.+|++||||||+||||||+|+|.++++... + .--+++|+..+|
T Consensus 193 W~D~~~p-~i~sl~~~~~sl~~sp~~t~piiVHCSAGvGRTGTFIalD~ll~~~~~~~~~t~~~~~t~D~if~iV~~LRs 271 (302)
T COG5599 193 WVDFNVP-DIRSLTEVIHSLNDSPVRTGPIIVHCSAGVGRTGTFIALDILLRMPNDTLNHTDTWEDTQDLIFQIVLSLRS 271 (302)
T ss_pred ccccCCc-CHHHHHHHHHHhhcCcCCCCCEEEEeccCCCCcceeeeHHHHHhccccccCCCchhhhhhhHHHHHHHHHHH
Confidence 9999999 777888888887766535599999999999999999999999987642 1 012678888887
Q ss_pred ---------HHHHHHHHHHHHHHHHhh
Q 020165 302 ---------EQYIFCHQAIVDELEDLI 319 (330)
Q Consensus 302 ---------~QY~F~y~~l~~~~~~~~ 319 (330)
+||.|||.+++++.+..+
T Consensus 272 QRmkmVQn~~Qf~flY~~~~~l~~~q~ 298 (302)
T COG5599 272 QRMKMVQNKTQFKFLYDAFLELNKSQI 298 (302)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhh
Confidence 899999999999885544
No 14
>PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry repesents several receptor and non-receptor protein-tyrosine phosphatases. Structurally, all known receptor PTPases, are made up of a variable length extracellular domain, followed by a transmembrane region and a C-terminal catalytic cytoplasmic domain. Some of the receptor PTPases contain fibronectin type III (FN-III) repeats, immunoglobulin-like domains, MAM domains or carbonic anhydrase-like domains in their extracellular region. The cytoplasmic region generally contains two copies of the PTPase domain. The first seems to have enzymatic activity, while the second is inactive. The inactive domains of tandem phosphatases can be divided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre []. PTPase domains consist of about 300 amino acids. There are two conserved cysteines, the second one has been shown to be absolutely required for activity. Furthermore, a number of conserved residues in its immediate vicinity have also been shown to be important.; GO: 0004725 protein tyrosine phosphatase activity, 0006470 protein dephosphorylation; PDB: 3O4T_A 3O4S_A 3O4U_A 2A3K_A 2QDP_A 2QDC_A 2QDM_A 2HVL_A 1ZC0_A 3D44_A ....
Probab=100.00 E-value=1.1e-54 Score=389.09 Aligned_cols=221 Identities=35% Similarity=0.695 Sum_probs=190.8
Q ss_pred CCCCCCCCCCCCCCCCeEEeccCCCCCCCCCCceeeeeeecCCCCcccceeeecCCCCCCHHHHHHHHHhccCCeEEEec
Q 020165 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLT 165 (330)
Q Consensus 86 n~~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dYINAs~i~~~~~~~~~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~ 165 (330)
|..|||+.||+|||++||+|... .+++||||||||+++.. .++||+||+|+++|++|||+|||+++|.+||||+
T Consensus 1 n~~knR~~~~~~~d~~rv~l~~~----~~~~~yi~A~~v~~~~~--~~~~I~~q~P~~~t~~~FW~mv~~~~~~~Iv~L~ 74 (235)
T PF00102_consen 1 NREKNRSPDILPYDDSRVKLNPS----PGDSDYINASYVDGYKN--GKKFIVTQAPMPDTIEDFWQMVWEQKVQIIVMLC 74 (235)
T ss_dssp GGGGSSSTTS-BBTTTEEETTTT----TTSTTEESEEEEEESSS--TEEEEEEES-SGGGHHHHHHHHHHTTBSEEEEES
T ss_pred CCccCCCCCCCcCcceEEEecCC----CCccchhhhhhhccccc--hhhheeecccccccccceehheeeccccceeccc
Confidence 67899999999999999999532 23468999999998853 4799999999999999999999999999999999
Q ss_pred ccccCCccccccccCCCC-CCcceeccceEEEE-EeeeecccEEEEEEEeeecCCCCCceEEEEEecCCCCCCCCCCChH
Q 020165 166 RLVDNYKMVKCGDYFQAE-DGPREFGNIGIVTK-WIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTL 243 (330)
Q Consensus 166 ~~~E~~~~~kc~~YwP~~-~~~~~~g~~~V~~~-~~~~~~~~~~~r~l~v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~ 243 (330)
+..|.+ ..+|.+|||.+ ++...+|.|+|++. .......++++|.|+|++.+.+...+.+.||||..||++++|.+..
T Consensus 75 ~~~e~~-~~~~~~y~P~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~v~~~~~~~W~~~~~P~~~~ 153 (235)
T PF00102_consen 75 SFDESG-DEKCDQYWPLKEGESLKFGDYTVKCKEKIEENSKHYTVRKLEVTNGKSKKKSRTVTHFHYTNWPDDGVPPSPE 153 (235)
T ss_dssp BSEETT-EESS--TSTSSSSSEEEETTEEEEEEEEEEEEESSEEEEEEEEEETTTTEEEEEEEEEEEESSSSSSSGSSSH
T ss_pred cccccc-ccccccccccccccccccccccccccccccccccceEEeeccccccccccccccccceeeeeccccccccccc
Confidence 998864 57999999954 66789999999999 6664568899999999987665335799999999999999999999
Q ss_pred HHHHHHHHHHcCC-CCCCCEEEEcCCCCChhHHHHHHHHHHHHHHc-CCCCHHHHHHHHH----------HHHHHHHHHH
Q 020165 244 AVREILKRIYNLP-PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILV-GDMSALDLANTVK----------EQYIFCHQAI 311 (330)
Q Consensus 244 ~~~~~~~~~~~~~-~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~-~~~~v~di~~~vr----------~QY~F~y~~l 311 (330)
.++++++.+.... ...+||+|||++|+||||+||+++++++++.. +.+++.++++.|| +||.|||.++
T Consensus 154 ~~~~~~~~v~~~~~~~~~pivVhc~~G~gRsg~f~~~~~~~~~~~~~~~~~v~~~~~~lR~~R~~~i~~~~qy~f~~~~~ 233 (235)
T PF00102_consen 154 SFLDFIRKVNKSKDDPNGPIVVHCSDGVGRSGTFCAIDILIEQLKKEGEVDVFEIVKKLRQQRPGAIQSPEQYRFCYMAV 233 (235)
T ss_dssp HHHHHHHHHHHHHSTTSSEEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTTSTTSSSSHHHHHHHHHHH
T ss_pred hhhhhhhhccccccCCccceEeecccccccccccccchhhccccccccchhhHHHHHHHHhhCCCccCCHHHHHHHHHHH
Confidence 9999998877654 34489999999999999999999999999986 5689999999999 9999999999
Q ss_pred HH
Q 020165 312 VD 313 (330)
Q Consensus 312 ~~ 313 (330)
+|
T Consensus 234 ~e 235 (235)
T PF00102_consen 234 LE 235 (235)
T ss_dssp HH
T ss_pred hC
Confidence 86
No 15
>KOG4228 consensus Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-53 Score=424.84 Aligned_cols=276 Identities=30% Similarity=0.533 Sum_probs=227.2
Q ss_pred CCCCCCCHHHHhHHHHHHHH-------------HHH----Hhh----cchHHHHHHHHHhHhcCCCCccccccceeecCC
Q 020165 26 PPRISLTADQYNHCSEALSF-------------FKE----KLQ----NKSREISQEFARLQASRIKPSEMARGCTVALDG 84 (330)
Q Consensus 26 p~~~~~t~~~~~~~~~~~~~-------------~~~----~~~----~~~~~~~~Ef~~l~~~~~~~~~~~~~~~~a~~~ 84 (330)
...+.+|.+|+-.+++++.- ++. +.. ....+|++||+.|......++. ..| |..+
T Consensus 776 R~~mVQt~eQYiFi~~AllE~~~~G~T~i~~~~~~~~~~~l~~~~p~~~~t~le~EF~~L~~~~~~~~~--~~~--~~l~ 851 (1087)
T KOG4228|consen 776 RNNMVQTEEQYIFIHEALLEACLCGDTEVPASTLAPYSQKLKRIDPPENKTGLEEEFKTLNSCKPRTRM--MIC--GNLP 851 (1087)
T ss_pred cccccccHHHHHHHHHHHHHHHhcCCccccHHHHHHHHHHhccCCCCCCCcchHHHHHHHhhccccchh--hhc--cccc
Confidence 46778899999988887742 222 111 1235899999999976544432 123 8899
Q ss_pred CCCCCCCCCCCCCCCCCeEEeccCCCCCCCCCCceeeeeeecCCCCcccceeeecCCCCCCHHHHHHHHHhccCCeEEEe
Q 020165 85 VNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVML 164 (330)
Q Consensus 85 ~n~~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dYINAs~i~~~~~~~~~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL 164 (330)
+|+.|||+.+|+|||++||.|.+..+ .++||||||+|+||... ..|||||+||.+|++|||||||+++|.+||||
T Consensus 852 ~N~~KNR~~~i~P~d~~rv~L~~~~G---~~sdYINAs~idgy~~~--~~fivtq~PL~~T~~DFWrmi~d~~~tsiVmL 926 (1087)
T KOG4228|consen 852 ENKSKNRQVNILPYDRNRVILIPTHG---ESSDYINASFIDGYRQP--KAFIVTQGPLAETVEDFWRMIWDQNVTSIVML 926 (1087)
T ss_pred hhcccccccccCCchhcccceeccCC---CcccccchhhhcccCCc--ceEEEecCCcccchHHHHHHhhccceeEEEEe
Confidence 99999999999999999999998765 48899999999999654 69999999999999999999999999999999
Q ss_pred cccccCCccccccccCCCCCCcceeccceEEEEEeeeecccEEEEEEEeeecCCCCCceEEEEEecCCCCCCCCCCCh-H
Q 020165 165 TRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDT-L 243 (330)
Q Consensus 165 ~~~~E~~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~~~~~~~r~l~v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~-~ 243 (330)
+++.+. ++|.+|||. .+...||.+.|....... ...++.|.|.|++...+. .|+|.||||++||..+.|... .
T Consensus 927 ~~l~~~---~~C~qyw~~-~g~~~yg~i~Ve~~~~~~-~~~~t~r~f~i~n~~~~~-~r~v~qfq~~~WP~~~~~p~~~~ 1000 (1087)
T KOG4228|consen 927 TELKHP---EKCPQYWPP-EGSQRYGPIEVEDMNEHI-NPQYTAREFGVTNEREKQ-SRTVRQFQFTGWPEYGKPPQSKG 1000 (1087)
T ss_pred cccCcc---cccccccCC-cCceecCcEEEEeccccc-chhhhhhhheeeeccccC-ceEEEEEEecCCcccCcCCCCcc
Confidence 999773 699999998 577889999999988776 567899999999876444 689999999999998876544 4
Q ss_pred HHHHHHHHHHcC--CCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHc-CCCCHHHHHHHHH----------HHHHHHHHH
Q 020165 244 AVREILKRIYNL--PPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILV-GDMSALDLANTVK----------EQYIFCHQA 310 (330)
Q Consensus 244 ~~~~~~~~~~~~--~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~-~~~~v~di~~~vr----------~QY~F~y~~ 310 (330)
.+..+...+.++ ....+|++|||++|+||||+||||.+++++++. +.+||+.+++.+| +||.|||++
T Consensus 1001 ~~~~i~~~~~~~q~~~~~~P~~Vhc~nG~~rsg~f~ai~~l~e~~~~e~~vDVfq~vk~Lr~~rp~mv~t~~QY~fcYdv 1080 (1087)
T KOG4228|consen 1001 PISKIPSVASKWQQLGADGPIIVHCLNGVGRTGTFCAISILLERMRKEGVVDVFQTVKTLRFQRPGMVDTSDQYQFCYDV 1080 (1087)
T ss_pred hhhhHHHHHHHHHhhcCCCCEEEEEcCCCcceeehHHHHHHHHHHhhcCceeeehhhhhhhhcCccccCcHHHHHHHHHH
Confidence 444444333322 222599999999999999999999999999985 6789999999998 999999999
Q ss_pred HHHHHH
Q 020165 311 IVDELE 316 (330)
Q Consensus 311 l~~~~~ 316 (330)
+++|+.
T Consensus 1081 ~~~y~~ 1086 (1087)
T KOG4228|consen 1081 ALEYLG 1086 (1087)
T ss_pred HHHhhc
Confidence 999873
No 16
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=100.00 E-value=6.6e-49 Score=372.63 Aligned_cols=255 Identities=16% Similarity=0.252 Sum_probs=188.8
Q ss_pred CCHHHHhHHHHHHHHHHHHhhcchHHHHHHHHHhHhcCCCCccccccceeecCCCCCCCCC--CCCCCCCCCCeEEeccC
Q 020165 31 LTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNR--YTDILPFDKNRVVLKQC 108 (330)
Q Consensus 31 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~Ef~~l~~~~~~~~~~~~~~~~a~~~~n~~kNR--~~~i~p~D~tRV~L~~~ 108 (330)
.|++++. ++.+.++..+..- ..+..|-+.+.....-+-.+.+ .....-| -.||+|+|||||+|+
T Consensus 253 as~~~l~---~a~~~~~~~~~~~-~~~~~~~~~~~ag~p~~~~~~~--------~~~~~~~~~~~~I~~~~~TrV~ls-- 318 (535)
T PRK15375 253 ASTHELT---QAVKKIHVIAKEL-KNVTAELEKIEAGAPMPQTMSG--------PTLGLARFAVSSIPINQQTQVKLS-- 318 (535)
T ss_pred cCHHHHH---HHHHHHHHHHHHH-HHHHHHHHHHhcCCCCccccCC--------ccchhhHHHhcccCccccceEEcC--
Confidence 3455443 3444444433322 4567777766654322211111 1223344 469999999999996
Q ss_pred CCCCCCCCCceeeeeeecCCCCcccceeeecCCCC--CCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCCCCc
Q 020165 109 KDYRPAARGYINASLISTSSSEKVSQFIATQGPLP--HTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGP 186 (330)
Q Consensus 109 ~~~~~~~~dYINAs~i~~~~~~~~~~yI~tQ~Pl~--~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~~~~ 186 (330)
+++|||||||+ +..+ +.+|++|.|+. +|++|||+||||++|.+||||++..|.+ ..+|.+||+ ++
T Consensus 319 ------~g~yI~ANyI~-~~~k--~~aIa~QYP~nt~eTieDFWrMVWEn~~~VIVMLT~l~E~g-~~KC~pYW~---~s 385 (535)
T PRK15375 319 ------DGMPVPVNTLT-FDGK--PVALAGSYPKNTPDALEAHMKMLLEKECSCLVVLTSEDQMQ-AKQLPPYFR---GS 385 (535)
T ss_pred ------CCCccccceee-ecCc--cceEeccCCCCchhhHHHHHHHHHHcCCCEEEEeeccccCc-ccccCccCC---Cc
Confidence 36999999999 5443 58999999975 8999999999999999999999998865 579999995 56
Q ss_pred ceeccceEEEEEeeeecccEEEEEEEeeecCCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHcCCC---------
Q 020165 187 REFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPP--------- 257 (330)
Q Consensus 187 ~~~g~~~V~~~~~~~~~~~~~~r~l~v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~~--------- 257 (330)
..||+|+|++.++.....++.+|.+.+..... +.++.|.||||++|||+|+|.++..+++|++.++....
T Consensus 386 ~tYGdItVts~seesls~g~iIR~f~L~Ik~~-E~R~tV~QFHyTnWPDHGVPpST~~LleLvr~Vr~~~q~~~~~~~~~ 464 (535)
T PRK15375 386 YTFGEVHTNSQKVSSASQGEAIDQYNMQLSCG-EKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSS 464 (535)
T ss_pred ceeccEEEEEEEEEeccCCceEEEEEEEEecC-CceeEEEEEEeCCCCCCCCCCChHHHHHHHHHHHHhhhccccccccc
Confidence 78999999988876543456777776654333 33458999999999999999888888888888765421
Q ss_pred CCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCCCCHHHHHHHHH-----------HHHHHHHHHHHHHHH
Q 020165 258 NFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVK-----------EQYIFCHQAIVDELE 316 (330)
Q Consensus 258 ~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~~~v~di~~~vr-----------~QY~F~y~~l~~~~~ 316 (330)
+.+++|||||||+||||||||++.+.+ .+.+++.+|+..+| +||.|++..-+..+.
T Consensus 465 nk~~PVVHCSAGVGRTGTFIAi~llk~---~~~~sle~IV~dlR~qRng~MVQt~eQy~~l~~~~~~~~~ 531 (535)
T PRK15375 465 DKHLPMIHCLGGVGRTGTMAAALVLKD---NPHSNLEQVRADFRNSRNNRMLEDASQFVQLKAMQAQLLM 531 (535)
T ss_pred CCCCceEEcCCCCchHHHHHHHHHHhc---cccCCHHHHHHHHHhcCCccccccHHHHHHHHHHHHHHhh
Confidence 113348999999999999999976321 35689999999999 999999998776553
No 17
>KOG0789 consensus Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-46 Score=365.39 Aligned_cols=229 Identities=30% Similarity=0.478 Sum_probs=178.3
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEeccCCCCCCCCCCceeeeeeecCCCCcccceeeecCCCCCCHHHHHHHHHhccCCeEE
Q 020165 83 DGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIV 162 (330)
Q Consensus 83 ~~~n~~kNR~~~i~p~D~tRV~L~~~~~~~~~~~dYINAs~i~~~~~~~~~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IV 162 (330)
...|..||||.||.|||++||+|.... ..||||||||+++.. . +.||+||||+++|.+|||+|||++++..||
T Consensus 124 ~~~~~~kNr~~dv~~~d~~rV~l~~~~-----~~dyI~A~~v~~~~~-~-~~~I~tQ~Pl~~t~~dFW~mv~~~k~~~Iv 196 (415)
T KOG0789|consen 124 FLKNMDKNRYSDVQCLDHTRVKLKPPQ-----DKDYIHASKIYFPKG-P-RTAILTQAPLSKTTEDFWRMVFEEKVESVV 196 (415)
T ss_pred hhccccccccCCcCcccCCeeecCCCC-----CcccchhhccCCcCC-C-cCceecCCCCcccHHHHHHHHHHcCCCEEE
Confidence 356888999999999999999997421 579999999999752 2 599999999999989999999999999999
Q ss_pred EecccccCCccccccccCCCCCC-cceeccceEEEEEeeeec-----ccEEEEEEEeeecCCCCCceEEEEEecCCCCCC
Q 020165 163 MLTRLVDNYKMVKCGDYFQAEDG-PREFGNIGIVTKWIKTTE-----TALVLRNLEVNYKESEEPPMSVLHIQYPEWPDH 236 (330)
Q Consensus 163 mL~~~~E~~~~~kc~~YwP~~~~-~~~~g~~~V~~~~~~~~~-----~~~~~r~l~v~~~~~~~~~r~v~h~~~~~Wpd~ 236 (330)
|||+..|.+ ..+|.+|||.+.+ ...||.+........... ..+....+.+...++...++.|.|+||.+|||+
T Consensus 197 ml~~~~E~~-~~kc~~Y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~WPd~ 275 (415)
T KOG0789|consen 197 LLCSDEELG-AAECASYFPSKRGVKLTFLEFGKKFVENRKVEMKQQDQTSTVGLLLLVLPEGLEISSSVVHYHYINWPDH 275 (415)
T ss_pred Eecchhhcc-HHHHhhcCcccCCCeeeecccceeEEEeeeeecccccccceeeEEEeecCCCccccceEEEEeeCCCccc
Confidence 999999986 6899999998763 446766644333222111 223333323332233332459999999999999
Q ss_pred CCCCChHHHHHHHHH-HHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcC--CCCHHHHHHHHH----------HH
Q 020165 237 GVPRDTLAVREILKR-IYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVG--DMSALDLANTVK----------EQ 303 (330)
Q Consensus 237 ~vP~~~~~~~~~~~~-~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~--~~~v~di~~~vr----------~Q 303 (330)
|+|.+...++.+++. .....+..+|++||||+|+||||||+++++++.++..+ ..++.++++.+| .|
T Consensus 276 ~~p~~~~~~l~~~~~~~~~~~~~~~P~vVhcsaG~gRtgt~v~~~~~~~~~~~~~~~~~~~~~~~~iR~qR~~~vqt~~Q 355 (415)
T KOG0789|consen 276 GAPDSVKSILPLLRQSVLELRPKQEPIEVHCSAGAGRAGTLVLIEHALIELQGPEGEPPIDEILREIRYQRPGAVQSPLQ 355 (415)
T ss_pred cCCcchHHHHHHHHhhhhhhcCCCCCeEEECCCCCCccchHHHHHHHHHHHhcCCCCccHHHHHHHHHHHhhhcccchhH
Confidence 999999999998874 22223344899999999999999999999888888642 345778877787 89
Q ss_pred HHHHHHHHHHHHHHhh
Q 020165 304 YIFCHQAIVDELEDLI 319 (330)
Q Consensus 304 Y~F~y~~l~~~~~~~~ 319 (330)
|.|+|+++++|++...
T Consensus 356 y~f~~~~~~~~~~~~~ 371 (415)
T KOG0789|consen 356 YLFIYAATLKYIKKVS 371 (415)
T ss_pred HHHHHHHHHHHHHHcc
Confidence 9999999999998733
No 18
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=99.82 E-value=8.5e-20 Score=142.49 Aligned_cols=89 Identities=36% Similarity=0.764 Sum_probs=77.6
Q ss_pred EEEEEecCCCCCCCCCCChHHHHHHHHHHHcCC---CCCCCEEEEcCCCCChhHHHHHHHHHHHHHHc--CCCCHHHHHH
Q 020165 224 SVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP---PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILV--GDMSALDLAN 298 (330)
Q Consensus 224 ~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~---~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~--~~~~v~di~~ 298 (330)
.+.||||.+|||.++|.....+++++..++... ...+||+|||++|+||||+||+++.++.++.. +.+++.++++
T Consensus 1 ~~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~~~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (105)
T smart00404 1 TVKHYHYTGWPDHGVPESPDSILEFLRAVKKNLNQSSSSGPVVVHCSAGVGRTGTFVALDILLQQLESETGEVDIFQTVK 80 (105)
T ss_pred CeEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 378999999999999988888888888776532 22489999999999999999999999999865 4689999999
Q ss_pred HHH----------HHHHHHHHHHH
Q 020165 299 TVK----------EQYIFCHQAIV 312 (330)
Q Consensus 299 ~vr----------~QY~F~y~~l~ 312 (330)
.+| +||.|+|.+++
T Consensus 81 ~ir~~r~~~~~~~~q~~~~~~~~~ 104 (105)
T smart00404 81 ELRKQRPGMVQTFEQYLFLYRALL 104 (105)
T ss_pred HHHhhhhhhCCcHHHHHHHHHHHh
Confidence 998 89999999986
No 19
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=99.82 E-value=8.5e-20 Score=142.49 Aligned_cols=89 Identities=36% Similarity=0.764 Sum_probs=77.6
Q ss_pred EEEEEecCCCCCCCCCCChHHHHHHHHHHHcCC---CCCCCEEEEcCCCCChhHHHHHHHHHHHHHHc--CCCCHHHHHH
Q 020165 224 SVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP---PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILV--GDMSALDLAN 298 (330)
Q Consensus 224 ~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~---~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~--~~~~v~di~~ 298 (330)
.+.||||.+|||.++|.....+++++..++... ...+||+|||++|+||||+||+++.++.++.. +.+++.++++
T Consensus 1 ~~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~~~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (105)
T smart00012 1 TVKHYHYTGWPDHGVPESPDSILEFLRAVKKNLNQSSSSGPVVVHCSAGVGRTGTFVALDILLQQLESETGEVDIFQTVK 80 (105)
T ss_pred CeEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 378999999999999988888888888776532 22489999999999999999999999999865 4689999999
Q ss_pred HHH----------HHHHHHHHHHH
Q 020165 299 TVK----------EQYIFCHQAIV 312 (330)
Q Consensus 299 ~vr----------~QY~F~y~~l~ 312 (330)
.+| +||.|+|.+++
T Consensus 81 ~ir~~r~~~~~~~~q~~~~~~~~~ 104 (105)
T smart00012 81 ELRKQRPGMVQTFEQYLFLYRALL 104 (105)
T ss_pred HHHhhhhhhCCcHHHHHHHHHHHh
Confidence 998 89999999986
No 20
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=99.46 E-value=4.3e-13 Score=113.95 Aligned_cols=126 Identities=23% Similarity=0.376 Sum_probs=86.6
Q ss_pred cceeeecCCCCCCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCCCCcceeccceEEEEEeeeecccEEEEEEE
Q 020165 133 SQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLE 212 (330)
Q Consensus 133 ~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~~~~~~~r~l~ 212 (330)
.+||++-+|+++++.+|....-+.++..||.++.. +|+.+ .+
T Consensus 16 ~r~~~~~~P~~~~~~~~l~~L~~~gI~~Iv~l~~~-----------~~~~~---------------------~~------ 57 (166)
T PTZ00242 16 FKFLILDAPSPSNLPLYIKELQRYNVTHLVRVCGP-----------TYDAE---------------------LL------ 57 (166)
T ss_pred eEEEEecCCCcccHHHHHHHHHhCCCeEEEecCCC-----------CCCHH---------------------HH------
Confidence 38999999999999999999999999999988531 11110 00
Q ss_pred eeecCCCCCceEEEEEecCCCC--CCCCCCCh--HHHHHHHHHHHcC-CCCCCCEEEEcCCCCChhHHHHHHHHHHHHHH
Q 020165 213 VNYKESEEPPMSVLHIQYPEWP--DHGVPRDT--LAVREILKRIYNL-PPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL 287 (330)
Q Consensus 213 v~~~~~~~~~r~v~h~~~~~Wp--d~~vP~~~--~~~~~~~~~~~~~-~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~ 287 (330)
...+++|..|| |.++|... ..+++++...... ....+||+|||.+|+||||+||++.. +.
T Consensus 58 -----------~~~gi~~~~~p~~D~~~P~~~~i~~~~~~i~~~~~~~~~~g~~V~VHC~aGigRSgt~~a~yL----~~ 122 (166)
T PTZ00242 58 -----------EKNGIEVHDWPFDDGAPPPKAVIDNWLRLLDQEFAKQSTPPETIAVHCVAGLGRAPILVALAL----VE 122 (166)
T ss_pred -----------HHCCCEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCeEEEECCCCCCHHHHHHHHHH----HH
Confidence 01122333444 66666332 3455666554432 12248999999999999999999863 34
Q ss_pred cCCCCHHHHHHHHH---------HHHHHHHHHH
Q 020165 288 VGDMSALDLANTVK---------EQYIFCHQAI 311 (330)
Q Consensus 288 ~~~~~v~di~~~vr---------~QY~F~y~~l 311 (330)
.+..++.+.++.+| +|+.|+.+..
T Consensus 123 ~~~~s~~eAi~~vr~~R~~~i~~~Q~~~l~~~~ 155 (166)
T PTZ00242 123 YGGMEPLDAVGFVREKRKGAINQTQLQFLKKYK 155 (166)
T ss_pred hCCCCHHHHHHHHHHHCCCCchHHHHHHHHHHH
Confidence 45578888888887 6888886654
No 21
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=99.13 E-value=4.3e-10 Score=99.34 Aligned_cols=123 Identities=18% Similarity=0.296 Sum_probs=83.1
Q ss_pred cceeeecCCCCCCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCCCCcceeccceEEEEEeeeecccEEEEEEE
Q 020165 133 SQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLE 212 (330)
Q Consensus 133 ~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~~~~~~~r~l~ 212 (330)
-+||++-+|+..++.+|..-....++..||-+|... | +.+ .+
T Consensus 92 ~rfLi~~~P~~~~~~~yl~eLk~~gV~~lVrlcE~~----------Y-d~~---------------------~~------ 133 (241)
T PTZ00393 92 IKILILDAPTNDLLPLYIKEMKNYNVTDLVRTCERT----------Y-NDG---------------------EI------ 133 (241)
T ss_pred eeEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCCCC----------C-CHH---------------------HH------
Confidence 499999999999999999999999999999986421 2 110 00
Q ss_pred eeecCCCCCceEEEEEecCCCCCCCCCCCh--HHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCC
Q 020165 213 VNYKESEEPPMSVLHIQYPEWPDHGVPRDT--LAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGD 290 (330)
Q Consensus 213 v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~--~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~ 290 (330)
... .+.+++ ..|||+++|... ..+++++.... ...++|+|||.+|+||||+++|+..+ + .|
T Consensus 134 ---~~~-----GI~~~~-lpipDg~aPs~~~i~~~l~~i~~~l---~~g~~VaVHC~AGlGRTGtl~AayLI-~---~G- 196 (241)
T PTZ00393 134 ---TSA-----GINVHE-LIFPDGDAPTVDIVSNWLTIVNNVI---KNNRAVAVHCVAGLGRAPVLASIVLI-E---FG- 196 (241)
T ss_pred ---HHc-----CCeEEE-eecCCCCCCCHHHHHHHHHHHHHHH---hcCCeEEEECCCCCCHHHHHHHHHHH-H---cC-
Confidence 000 122222 368999988432 23444444333 22378999999999999999987643 3 23
Q ss_pred CCHHHHHHHHH---------HHHHHHHHH
Q 020165 291 MSALDLANTVK---------EQYIFCHQA 310 (330)
Q Consensus 291 ~~v~di~~~vr---------~QY~F~y~~ 310 (330)
.+..+.+..|| .|+.|+.+.
T Consensus 197 mspeeAI~~VR~~RPgAIn~~Q~~fL~~y 225 (241)
T PTZ00393 197 MDPIDAIVFIRDRRKGAINKRQLQFLKAY 225 (241)
T ss_pred CCHHHHHHHHHHHCCCCCCHHHHHHHHHH
Confidence 46666666666 788876654
No 22
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=98.72 E-value=4.3e-08 Score=80.33 Aligned_cols=72 Identities=17% Similarity=0.227 Sum_probs=51.1
Q ss_pred EEEEEecCCCCCCCCCCChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 020165 224 SVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKE 302 (330)
Q Consensus 224 ~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~~~v~di~~~vr~ 302 (330)
...|+.+.+|++...+.....+++++...... .+||+|||.+|.||||++++...+.. +..+..+.++.||+
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~i~~~~~~---~~~vlVHC~~G~~Rs~~~~~~~l~~~----~~~~~~~a~~~vr~ 120 (139)
T cd00127 49 NYLYVPILDLPSQDISKYFDEAVDFIDDAREK---GGKVLVHCLAGVSRSATLVIAYLMKT----LGLSLREAYEFVKS 120 (139)
T ss_pred eEEEEEceeCCCCChHHHHHHHHHHHHHHHhc---CCcEEEECCCCCchhHHHHHHHHHHH----cCCCHHHHHHHHHH
Confidence 67788888888555443444556666655432 37999999999999999998765433 34677788887773
No 23
>KOG1720 consensus Protein tyrosine phosphatase CDC14 [Defense mechanisms]
Probab=98.66 E-value=1.9e-07 Score=80.24 Aligned_cols=75 Identities=28% Similarity=0.368 Sum_probs=56.1
Q ss_pred CCCCCCCCCChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCCCCHHHHHHHHH----------
Q 020165 232 EWPDHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVK---------- 301 (330)
Q Consensus 232 ~Wpd~~vP~~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~~~v~di~~~vr---------- 301 (330)
-.||.+.| ++..+.++++.+..... .|-|.|||-+|.||||+++|..++... .++.-+.+..||
T Consensus 122 ~f~Dg~tP-~~~~v~~fv~i~e~~~~-~g~iaVHCkaGlGRTG~liAc~lmy~~----g~ta~eaI~~lR~~RpG~V~gp 195 (225)
T KOG1720|consen 122 FFADGSTP-TDAIVKEFVKIVENAEK-GGKIAVHCKAGLGRTGTLIACYLMYEY----GMTAGEAIAWLRICRPGAVIGP 195 (225)
T ss_pred ecCCCCCC-CHHHHHHHHHHHHHHHh-cCeEEEEeccCCCchhHHHHHHHHHHh----CCCHHHHHHHHHhcCCccccCH
Confidence 35777777 67778888877766554 488999999999999999999876552 245556666666
Q ss_pred HHHHHHHHHHH
Q 020165 302 EQYIFCHQAIV 312 (330)
Q Consensus 302 ~QY~F~y~~l~ 312 (330)
+|+..+++--.
T Consensus 196 qQ~~l~~~q~~ 206 (225)
T KOG1720|consen 196 QQHKLLHKQRD 206 (225)
T ss_pred HHHHHHHHHHH
Confidence 88888877654
No 24
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=98.51 E-value=2.2e-07 Score=80.08 Aligned_cols=77 Identities=23% Similarity=0.226 Sum_probs=47.4
Q ss_pred CCCCCCCCCChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCCCCHHHHHHHHH----------
Q 020165 232 EWPDHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVK---------- 301 (330)
Q Consensus 232 ~Wpd~~vP~~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~~~v~di~~~vr---------- 301 (330)
.++|+.+|+- ..+.+++..+.......+.|+|||.+|+|||||+++...++.. +....-+.+.-+|
T Consensus 79 ~~~D~~~p~~-~~l~~~v~~i~~~~~~g~kVvVHC~~GigRSgtviaA~lm~~~---~~~~~~~~i~~~~~~r~~~v~~~ 154 (180)
T COG2453 79 PILDGTVPDL-EDLDKIVDFIEEALSKGKKVVVHCQGGIGRSGTVIAAYLMLYG---GLSLADEAIAVKRRRRPGAVVTE 154 (180)
T ss_pred eecCCCCCcH-HHHHHHHHHHHHHHhcCCeEEEEcCCCCchHHHHHHHHHHHHc---CCCCHHHHHHHHHhcCCcccccH
Confidence 6789998843 4444444443333223258999999999999999998765552 1122233333232
Q ss_pred HHHHHHHHHHH
Q 020165 302 EQYIFCHQAIV 312 (330)
Q Consensus 302 ~QY~F~y~~l~ 312 (330)
.|+.|..+...
T Consensus 155 ~q~~~~~e~~~ 165 (180)
T COG2453 155 IQHLFELEQEL 165 (180)
T ss_pred HHHHHHHHHHH
Confidence 67777776654
No 25
>KOG2836 consensus Protein tyrosine phosphatase IVA1 [Signal transduction mechanisms]
Probab=98.36 E-value=5.2e-06 Score=66.38 Aligned_cols=114 Identities=24% Similarity=0.438 Sum_probs=74.4
Q ss_pred cceeeecCCCCCCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCCCCcceeccceEEEEEeeeecccEEEEEEE
Q 020165 133 SQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLE 212 (330)
Q Consensus 133 ~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~~~~~~~r~l~ 212 (330)
.+|++|-.|...|+..|-.-+-.+++..+|-.|...-+. ... +..+
T Consensus 17 MrFLIThnPtnaTln~fieELkKygvttvVRVCe~TYdt-------------~~l--------------ek~G------- 62 (173)
T KOG2836|consen 17 MRFLITHNPTNATLNKFIEELKKYGVTTVVRVCEPTYDT-------------TPL--------------EKEG------- 62 (173)
T ss_pred eEEEEecCCCchhHHHHHHHHHhcCCeEEEEecccccCC-------------chh--------------hhcC-------
Confidence 589999999999999999999999999999987542210 000 0011
Q ss_pred eeecCCCCCceEEEEEecCCCC-CCCCCCChHH---HHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHc
Q 020165 213 VNYKESEEPPMSVLHIQYPEWP-DHGVPRDTLA---VREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILV 288 (330)
Q Consensus 213 v~~~~~~~~~r~v~h~~~~~Wp-d~~vP~~~~~---~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~ 288 (330)
++..+|| |.|.|..... .+.++..-.+..++ ..|.|||-+|+||+-+++|+..+-.
T Consensus 63 ---------------I~Vldw~f~dg~ppp~qvv~~w~~l~~~~f~e~p~-~cvavhcvaglgrapvlvalalie~---- 122 (173)
T KOG2836|consen 63 ---------------ITVLDWPFDDGAPPPNQVVDDWLSLVKTKFREEPG-CCVAVHCVAGLGRAPVLVALALIEA---- 122 (173)
T ss_pred ---------------ceEeecccccCCCCchHHHHHHHHHHHHHHhhCCC-CeEEEEeecccCcchHHHHHHHHHc----
Confidence 1234788 6777754432 33444333333343 6799999999999999999864322
Q ss_pred CCCCHHHHHHHHH
Q 020165 289 GDMSALDLANTVK 301 (330)
Q Consensus 289 ~~~~v~di~~~vr 301 (330)
| ..--|.++.||
T Consensus 123 g-mkyedave~ir 134 (173)
T KOG2836|consen 123 G-MKYEDAVEMIR 134 (173)
T ss_pred c-ccHHHHHHHHH
Confidence 2 23445555555
No 26
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=98.34 E-value=3.9e-06 Score=68.81 Aligned_cols=72 Identities=19% Similarity=0.188 Sum_probs=41.3
Q ss_pred EEEEecCCCCCCCCCCChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 020165 225 VLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVK 301 (330)
Q Consensus 225 v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~~~v~di~~~vr 301 (330)
+.++++ .++|...+.....+...++.+.......+||+|||.+|.||||+++++..+.. ...+..+.++.+|
T Consensus 45 ~~~~~i-pi~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~~yl~~~----~~~~~~~A~~~v~ 116 (138)
T smart00195 45 FTYLGV-PILDNTETKISPYFPEAVEFIEDAEKKGGKVLVHCQAGVSRSATLIIAYLMKY----RNLSLNDAYDFVK 116 (138)
T ss_pred CEEEEE-ECCCCCCCChHHHHHHHHHHHHHHhcCCCeEEEECCCCCchHHHHHHHHHHHH----hCCCHHHHHHHHH
Confidence 344444 34553333233333333333333233347999999999999999998764332 2345666666665
No 27
>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=98.04 E-value=6.2e-06 Score=69.10 Aligned_cols=125 Identities=20% Similarity=0.217 Sum_probs=55.0
Q ss_pred CCceeeeeeecCCCCcccceeeecCCCC------CCHHHHHHHHHhccCCeEEEecccccCCccccccccCCCCCCccee
Q 020165 116 RGYINASLISTSSSEKVSQFIATQGPLP------HTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREF 189 (330)
Q Consensus 116 ~dYINAs~i~~~~~~~~~~yI~tQ~Pl~------~T~~dFW~MV~e~~v~~IVmL~~~~E~~~~~kc~~YwP~~~~~~~~ 189 (330)
++-|+.+|++....+......+|-.|=. .....=-.-+.++.+..||.|+...|... .+ +|. +
T Consensus 24 ~~P~~i~~l~~s~~~~~~~Lglt~~PG~k~~d~~RdL~~DL~~Lk~~G~~~Vvtl~~~~EL~~-l~----Vp~------L 92 (168)
T PF05706_consen 24 QTPIQIDWLPLSPVNCSGFLGLTFLPGCKFKDWRRDLQADLERLKDWGAQDVVTLLTDHELAR-LG----VPD------L 92 (168)
T ss_dssp TS----EEEE-GGGT-SSEEEEES-TT-EETTEEB-HHHHHHHHHHTT--EEEE-S-HHHHHH-TT-----TT------H
T ss_pred CCceeeeeecccccCCcceeeeecCCCcccccccchHHHHHHHHHHCCCCEEEEeCcHHHHHH-cC----Ccc------H
Confidence 4677888877542222234555666632 22333345567889999999987766421 00 121 1
Q ss_pred ccceEEEEEeeeecccEEEEEEEeeecCCCCCceEEEEEecCCCCCCCCCCChHHHHHHHHHHHcCCCCCCCEEEEcCCC
Q 020165 190 GNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAG 269 (330)
Q Consensus 190 g~~~V~~~~~~~~~~~~~~r~l~v~~~~~~~~~r~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~~~~~PivVHCs~G 269 (330)
+. ..... ...+.| | -+||.++| +...+..++..+...-.+...|+|||..|
T Consensus 93 ~~--------~~~~~-----------------Gi~~~h--~-PI~D~~aP-d~~~~~~i~~eL~~~L~~g~~V~vHC~GG 143 (168)
T PF05706_consen 93 GE--------AAQAR-----------------GIAWHH--L-PIPDGSAP-DFAAAWQILEELAARLENGRKVLVHCRGG 143 (168)
T ss_dssp HH--------HHHHT-----------------T-EEEE-------TTS----HHHHHHHHHHHHHHHHTT--EEEE-SSS
T ss_pred HH--------HHHHc-----------------CCEEEe--c-CccCCCCC-CHHHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 11 00001 113333 3 67899999 45555555555443222236899999999
Q ss_pred CChhHHHHHHH
Q 020165 270 IGRTGAYCTIH 280 (330)
Q Consensus 270 vGRtGtfiai~ 280 (330)
.||||+++|..
T Consensus 144 lGRtGlvAAcL 154 (168)
T PF05706_consen 144 LGRTGLVAACL 154 (168)
T ss_dssp SSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999998764
No 28
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=97.99 E-value=3.3e-05 Score=62.70 Aligned_cols=54 Identities=24% Similarity=0.338 Sum_probs=35.7
Q ss_pred ChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 020165 241 DTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVK 301 (330)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~~~v~di~~~vr 301 (330)
....+.+++...... .++|+|||.+|+||||+++++..+.. +..+..+.++.++
T Consensus 58 ~~~~~~~~i~~~~~~---~~~VlVHC~~G~~RS~~v~~ayLm~~----~~~~~~~A~~~v~ 111 (133)
T PF00782_consen 58 HLDQAVEFIENAISE---GGKVLVHCKAGLSRSGAVAAAYLMKK----NGMSLEEAIEYVR 111 (133)
T ss_dssp GHHHHHHHHHHHHHT---TSEEEEEESSSSSHHHHHHHHHHHHH----HTSSHHHHHHHHH
T ss_pred HHHHHHHhhhhhhcc---cceeEEEeCCCcccchHHHHHHHHHH----cCCCHHHHHHHHH
Confidence 334556666655332 37899999999999999998765332 2245555555555
No 29
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=97.77 E-value=5.2e-05 Score=64.25 Aligned_cols=71 Identities=25% Similarity=0.353 Sum_probs=39.1
Q ss_pred EEEEEecCCCCCCCCCCChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 020165 224 SVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVK 301 (330)
Q Consensus 224 ~v~h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~~~v~di~~~vr 301 (330)
.+.|+....|.+..++.+...+.+.++.+... .+.||+|||..|..|||+.+|+.--++ .-+...++...|
T Consensus 58 ~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~--~n~PvLiHC~~G~~rTG~vvg~lRk~Q-----~W~~~~i~~Ey~ 128 (164)
T PF03162_consen 58 KLIHIPMSSSKDPWVPISEEQVAEALEIILDP--RNYPVLIHCNHGKDRTGLVVGCLRKLQ-----GWSLSSIFDEYR 128 (164)
T ss_dssp EEEE-------GGG----HHHHHHHHHHHH-G--GG-SEEEE-SSSSSHHHHHHHHHHHHT-----TB-HHHHHHHHH
T ss_pred eEEEeccccccCccccCCHHHHHHHHHHHhCC--CCCCEEEEeCCCCcchhhHHHHHHHHc-----CCCHHHHHHHHH
Confidence 44555555554445555667777777765432 238999999999999999999855222 345667777665
No 30
>PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B ....
Probab=97.59 E-value=0.00012 Score=61.06 Aligned_cols=49 Identities=27% Similarity=0.483 Sum_probs=33.7
Q ss_pred CCCCCCCCChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHH
Q 020165 233 WPDHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTV 283 (330)
Q Consensus 233 Wpd~~vP~~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~ 283 (330)
.+|+..| ++..+-.|+..++..+. ...+++||.+|.|||.+|.++..++
T Consensus 100 itd~~~P-~~~~iD~fi~~v~~~p~-~~~l~fhC~~G~GRTTt~Mv~~~li 148 (149)
T PF14566_consen 100 ITDHQAP-DPEDIDAFINFVKSLPK-DTWLHFHCQAGRGRTTTFMVMYDLI 148 (149)
T ss_dssp E-TTS----HHHHHHHHHHHHTS-T-T-EEEEE-SSSSHHHHHHHHHHHHH
T ss_pred CCCcCCC-CHHHHHHHHHHHHhCCC-CCeEEEECCCCCCHHHHHHHHHHHh
Confidence 4566666 56677777887877744 4889999999999999999887654
No 31
>PRK12361 hypothetical protein; Provisional
Probab=97.17 E-value=0.00063 Score=68.72 Aligned_cols=63 Identities=22% Similarity=0.344 Sum_probs=38.2
Q ss_pred CCCCCCChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 020165 235 DHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVK 301 (330)
Q Consensus 235 d~~vP~~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~~~v~di~~~vr 301 (330)
|...| +...+.+.++.+.+.....++|+|||.+|.|||+++++...+... ...+.-+.++.||
T Consensus 152 D~~~p-~~~~l~~a~~~i~~~~~~~~~VlVHC~~G~sRSa~vv~ayLm~~~---~~~~~~eA~~~vr 214 (547)
T PRK12361 152 DHSVP-TLAQLNQAINWIHRQVRANKSVVVHCALGRGRSVLVLAAYLLCKD---PDLTVEEVLQQIK 214 (547)
T ss_pred CCCCC-cHHHHHHHHHHHHHHHHCCCeEEEECCCCCCcHHHHHHHHHHHhc---cCCCHHHHHHHHH
Confidence 55556 445554444444433233379999999999999999887644221 1234445555444
No 32
>KOG1717 consensus Dual specificity phosphatase [Defense mechanisms]
Probab=96.99 E-value=0.0015 Score=58.35 Aligned_cols=63 Identities=21% Similarity=0.277 Sum_probs=43.9
Q ss_pred HHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCCCCHHHHHHHHH----HHHHHHHHHHH
Q 020165 246 REILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVK----EQYIFCHQAIV 312 (330)
Q Consensus 246 ~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~~~v~di~~~vr----~QY~F~y~~l~ 312 (330)
+.|+...+... .-++|||-+||.||-|.++.. +|+.+...--+.+|.++.-+ --|-|..+.+.
T Consensus 241 IsfIdeArsk~---cgvLVHClaGISRSvTvtvaY-LMqkl~lslndAyd~Vk~kksnisPNFnFMgQLld 307 (343)
T KOG1717|consen 241 ISFIDEARSKN---CGVLVHCLAGISRSVTVTVAY-LMQKLNLSLNDAYDFVKHKKSNISPNFNFMGQLLD 307 (343)
T ss_pred HHHHHHhhccC---CcEEEeeeccccchhHHHHHH-HHHHhccchhhHHHHHHHhccCCCCCcchhHHHHH
Confidence 45555554433 569999999999999888764 55555433346788888766 67888888653
No 33
>COG5350 Predicted protein tyrosine phosphatase [General function prediction only]
Probab=96.80 E-value=0.0046 Score=50.90 Aligned_cols=47 Identities=34% Similarity=0.577 Sum_probs=34.1
Q ss_pred CCCCCC-CCCChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHH
Q 020165 232 EWPDHG-VPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTI 279 (330)
Q Consensus 232 ~Wpd~~-vP~~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai 279 (330)
.-|+.| .-.....+..++..++.++.. .|++|||.+|+|||-....+
T Consensus 66 ~~~~~g~~ap~e~Hv~~i~DF~~~wp~~-apllIHC~aGISRStA~A~i 113 (172)
T COG5350 66 AEPDDGWIAPGEAHVRAIIDFADEWPRF-APLLIHCYAGISRSTAAALI 113 (172)
T ss_pred cCCCccccCCCHHHHHHHHHHHhcCccc-cceeeeeccccccchHHHHH
Confidence 344444 333667777888888888765 89999999999999664433
No 34
>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B.
Probab=96.67 E-value=0.0036 Score=52.88 Aligned_cols=35 Identities=11% Similarity=0.057 Sum_probs=21.6
Q ss_pred ceeeecCCCCCCHHHHHHHHHhccCCeEEEeccccc
Q 020165 134 QFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVD 169 (330)
Q Consensus 134 ~yI~tQ~Pl~~T~~dFW~MV~e~~v~~IVmL~~~~E 169 (330)
.++=+-.|..-|.+|.+.+. +.+++.||=|-...|
T Consensus 20 ~lyRS~~l~~lt~~d~~~L~-~lgI~tIiDLRs~~E 54 (164)
T PF13350_consen 20 RLYRSGNLSNLTEADLERLR-ELGIRTIIDLRSPTE 54 (164)
T ss_dssp SEEEES--TT--HHHHHHHH-HTT--EEEE-S-HHH
T ss_pred cEEecCCcCcCCHHHHHHHH-hCCCCEEEECCCccc
Confidence 44555666777889998888 999999999988776
No 35
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=96.49 E-value=0.022 Score=46.56 Aligned_cols=52 Identities=15% Similarity=0.289 Sum_probs=33.2
Q ss_pred ChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 020165 241 DTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVK 301 (330)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~~~v~di~~~vr 301 (330)
+...+..+.+.+... .+||++||.+|- |||++.++.... .| ++.-+|++..+
T Consensus 71 ~~~~v~~f~~~~~~~---~~pvL~HC~sG~-Rt~~l~al~~~~----~g-~~~~~i~~~~~ 122 (135)
T TIGR01244 71 TPDDVETFRAAIGAA---EGPVLAYCRSGT-RSSLLWGFRQAA----EG-VPVEEIVRRAQ 122 (135)
T ss_pred CHHHHHHHHHHHHhC---CCCEEEEcCCCh-HHHHHHHHHHHH----cC-CCHHHHHHHHH
Confidence 334444554444432 289999999999 999998875433 23 45556665554
No 36
>KOG1718 consensus Dual specificity phosphatase [Defense mechanisms]
Probab=96.46 E-value=0.004 Score=52.10 Aligned_cols=56 Identities=27% Similarity=0.446 Sum_probs=36.0
Q ss_pred EEEEEecCCCCCCCCCCCh-----HHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHH
Q 020165 224 SVLHIQYPEWPDHGVPRDT-----LAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNT 282 (330)
Q Consensus 224 ~v~h~~~~~Wpd~~vP~~~-----~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~ 282 (330)
....+||..-|-.+.|... +.+.+.+..+.. ..|.++|||-|||+||+++|.+..+
T Consensus 57 ~l~~~qy~kv~~~D~p~~~l~~hfD~vAD~I~~v~~---~gG~TLvHC~AGVSRSAsLClAYLm 117 (198)
T KOG1718|consen 57 SLPDIQYMKVPLEDTPQARLYDHFDPVADKIHSVIM---RGGKTLVHCVAGVSRSASLCLAYLM 117 (198)
T ss_pred cCCCceeEEEEcccCCcchhhhhhhHHHHHHHHHHh---cCCcEEEEEccccchhHHHHHHHHH
Confidence 3444555555544555332 334455555543 2388999999999999999987643
No 37
>KOG2283 consensus Clathrin coat dissociation kinase GAK/PTEN/Auxilin and related tyrosine phosphatases [Signal transduction mechanisms; General function prediction only]
Probab=96.36 E-value=0.0026 Score=61.88 Aligned_cols=70 Identities=29% Similarity=0.296 Sum_probs=43.9
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHcCC--CCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 020165 231 PEWPDHGVPRDTLAVREILKRIYNLP--PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVK 301 (330)
Q Consensus 231 ~~Wpd~~vP~~~~~~~~~~~~~~~~~--~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~~~v~di~~~vr 301 (330)
.+|+|+.+| +...+..+-+.+.++- ....=++|||-+|-||||+.+....+...+....-..++.+..-|
T Consensus 78 ~~~~Dh~~P-~L~~l~~~c~~~~~WL~~d~~nVvvvHCk~Gkgrtg~~icA~L~~~~~~~ta~eald~~~~kR 149 (434)
T KOG2283|consen 78 FGFDDHNPP-PLELLCPFCKSMDNWLSEDPKNVVVVHCKAGKGRTGVMICAYLIYSGISATAEEALDYFNEKR 149 (434)
T ss_pred cCCCCCCCC-cHHHHHHHHHCHHHHHhcCccceEEEEccCCCcceEEEEeHHHHhhhhcCCHHHHHHHHhhhh
Confidence 499999999 5555555555554431 112568999999999999987666555544332122344444444
No 38
>KOG1719 consensus Dual specificity phosphatase [Defense mechanisms]
Probab=96.07 E-value=0.095 Score=43.44 Aligned_cols=83 Identities=16% Similarity=0.280 Sum_probs=48.1
Q ss_pred CCCCCChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHHHHHHcCCCC---HHHHHHHHH-------HHHH
Q 020165 236 HGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMS---ALDLANTVK-------EQYI 305 (330)
Q Consensus 236 ~~vP~~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~~~l~~~~~~---v~di~~~vr-------~QY~ 305 (330)
.|.| +.+.+..-++.+.+...-...+-|||-||-|||.|.++...+.. .... .++-++.+| .|.
T Consensus 87 ~~~P-s~~~i~~aVeFi~k~asLGktvYVHCKAGRtRSaTvV~cYLmq~----~~wtpe~A~~~vr~iRp~VlL~~~Qw- 160 (183)
T KOG1719|consen 87 TGAP-SLENIQKAVEFIHKNASLGKTVYVHCKAGRTRSATVVACYLMQH----KNWTPEAAVEHVRKIRPRVLLRPAQW- 160 (183)
T ss_pred cCCC-CHHHHHHHHHHHHhccccCCeEEEEecCCCccchhhhhhhhhhh----cCCCHHHHHHHHHhcCcceeecHHHH-
Confidence 3566 44445444444443333225799999999999999988764322 2222 345555555 554
Q ss_pred HHHHHHHHHHHHhhcCCCcccc
Q 020165 306 FCHQAIVDELEDLISGFNSERT 327 (330)
Q Consensus 306 F~y~~l~~~~~~~~~~~~~~~~ 327 (330)
+++.+|.+.+....++.-+
T Consensus 161 ---~~l~ef~~~~~~~~ss~gt 179 (183)
T KOG1719|consen 161 ---DVLKEFYKQIVANASSDGT 179 (183)
T ss_pred ---HHHHHHHHHHHhccccccc
Confidence 3566666666655544433
No 39
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=95.73 E-value=0.024 Score=44.71 Aligned_cols=38 Identities=24% Similarity=0.521 Sum_probs=27.9
Q ss_pred ChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHH
Q 020165 241 DTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNT 282 (330)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~ 282 (330)
+...+..|.+.+.+.. +||++||..| .|++++.++.-.
T Consensus 71 ~~~~v~~f~~~l~~~~---~Pvl~hC~sG-~Ra~~l~~l~~~ 108 (110)
T PF04273_consen 71 TEEDVEAFADALESLP---KPVLAHCRSG-TRASALWALAQA 108 (110)
T ss_dssp -HHHHHHHHHHHHTTT---TSEEEE-SCS-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC---CCEEEECCCC-hhHHHHHHHHhh
Confidence 5566777777666643 7999999999 599999988654
No 40
>KOG1716 consensus Dual specificity phosphatase [Defense mechanisms]
Probab=95.25 E-value=0.06 Score=49.81 Aligned_cols=37 Identities=19% Similarity=0.357 Sum_probs=27.7
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHHH
Q 020165 244 AVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTV 283 (330)
Q Consensus 244 ~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~~ 283 (330)
...+++..+... .+-++|||.+|++||.+++.+.++.
T Consensus 143 ~~~~fI~~a~~~---~~~vlVHC~~GvSRSat~viAYlM~ 179 (285)
T KOG1716|consen 143 EAISFIEKAREK---GGKVLVHCQAGVSRSATLVIAYLMK 179 (285)
T ss_pred HHHHHHHHHHhC---CCeEEEEcCCccchhHHHHHHHHHH
Confidence 345566665544 3789999999999999998776543
No 41
>COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms]
Probab=94.20 E-value=0.076 Score=48.12 Aligned_cols=25 Identities=36% Similarity=0.806 Sum_probs=21.9
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHH
Q 020165 259 FGPIVVHCSAGIGRTGAYCTIHNTV 283 (330)
Q Consensus 259 ~~PivVHCs~GvGRtGtfiai~~~~ 283 (330)
++|+++||.+|.-|||..+|+...+
T Consensus 136 ~~PvL~HC~~GkdRTGl~~al~r~~ 160 (249)
T COG2365 136 NGPVLIHCTAGKDRTGLVAALYRKL 160 (249)
T ss_pred cCCEEEecCCCCcchHHHHHHHHHH
Confidence 4899999999999999999986543
No 42
>PLN02727 NAD kinase
Probab=93.94 E-value=0.14 Score=53.79 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=31.1
Q ss_pred ChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHHH
Q 020165 241 DTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNT 282 (330)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~~ 282 (330)
+.+.+.++.+.++... ..||++||..|.+|||++.|+...
T Consensus 325 t~EqVe~fa~~l~~sl--pkPVLvHCKSGarRAGamvA~yl~ 364 (986)
T PLN02727 325 SAEQVEKFASLVSDSS--KKPIYLHSKEGVWRTSAMVSRWKQ 364 (986)
T ss_pred CHHHHHHHHHHHHhhc--CCCEEEECCCCCchHHHHHHHHHH
Confidence 5677777777773322 279999999999999999998654
No 43
>KOG4471 consensus Phosphatidylinositol 3-phosphate 3-phosphatase myotubularin MTM1 [Lipid transport and metabolism; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.33 E-value=0.1 Score=51.84 Aligned_cols=29 Identities=24% Similarity=0.473 Sum_probs=24.1
Q ss_pred CCCCCCCEEEEcCCCCChhHHHHHHHHHH
Q 020165 255 LPPNFGPIVVHCSAGIGRTGAYCTIHNTV 283 (330)
Q Consensus 255 ~~~~~~PivVHCs~GvGRtGtfiai~~~~ 283 (330)
...+..||+||||+|=.||..+.++.+++
T Consensus 370 Ve~~~~sVlVHCSDGWDRT~QlvsLA~Ll 398 (717)
T KOG4471|consen 370 VESESRSVLVHCSDGWDRTAQLVSLAMLL 398 (717)
T ss_pred HhcCCceEEEEcCCCccchHHHHHHHHHH
Confidence 33445799999999999999999987764
No 44
>KOG1572 consensus Predicted protein tyrosine phosphatase [Defense mechanisms]
Probab=87.35 E-value=2.1 Score=38.17 Aligned_cols=38 Identities=29% Similarity=0.478 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHHHH
Q 020165 242 TLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHN 281 (330)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai~~ 281 (330)
.+.+...++.+- ...+.|++|||.-|=-|||++++..-
T Consensus 133 ~~~i~~~l~~ll--d~~N~P~Lihc~rGkhRtg~lVgclR 170 (249)
T KOG1572|consen 133 DHSIRKALKVLL--DKRNYPILIHCKRGKHRTGCLVGCLR 170 (249)
T ss_pred HHHHHHHHHHHh--cccCCceEEecCCCCcchhhhHHHHH
Confidence 344555555432 23348999999999999999998754
No 45
>PF06602 Myotub-related: Myotubularin-like phosphatase domain; InterPro: IPR010569 This family represents a region within eukaryotic myotubularin-related proteins that is sometimes found with IPR004182 from INTERPRO. Myotubularin is a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (3,5)-bi-phosphate []. Mutations in gene encoding myotubularin-related proteins have been associated with disease [].; GO: 0016791 phosphatase activity, 0016311 dephosphorylation; PDB: 1M7R_B 1LW3_A 1ZVR_A 1ZSQ_A 2YF0_A.
Probab=84.72 E-value=1.7 Score=41.41 Aligned_cols=25 Identities=28% Similarity=0.539 Sum_probs=19.9
Q ss_pred CCCEEEEcCCCCChhHHHHHHHHHH
Q 020165 259 FGPIVVHCSAGIGRTGAYCTIHNTV 283 (330)
Q Consensus 259 ~~PivVHCs~GvGRtGtfiai~~~~ 283 (330)
..+|+|||++|-.||..+++|..++
T Consensus 231 ~~~Vlvh~~dGwDrt~q~~sL~ql~ 255 (353)
T PF06602_consen 231 GSSVLVHCSDGWDRTSQLSSLAQLL 255 (353)
T ss_dssp --EEEEECTTSSSHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCcccHHHHHHHHHH
Confidence 3789999999999999988876543
No 46
>KOG1089 consensus Myotubularin-related phosphatidylinositol 3-phosphate 3-phosphatase MTM6 [General function prediction only]
Probab=76.53 E-value=3.3 Score=41.64 Aligned_cols=23 Identities=30% Similarity=0.586 Sum_probs=20.2
Q ss_pred CCEEEEcCCCCChhHHHHHHHHH
Q 020165 260 GPIVVHCSAGIGRTGAYCTIHNT 282 (330)
Q Consensus 260 ~PivVHCs~GvGRtGtfiai~~~ 282 (330)
.+||||||+|-.||...+.+..+
T Consensus 345 ~sVlvhcsdGwDrT~qV~SLaQl 367 (573)
T KOG1089|consen 345 ASVLVHCSDGWDRTCQVSSLAQL 367 (573)
T ss_pred CeEEEEccCCcchhHHHHHHHHH
Confidence 79999999999999998887554
No 47
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.93 E-value=23 Score=28.27 Aligned_cols=33 Identities=18% Similarity=0.393 Sum_probs=21.1
Q ss_pred ChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHH
Q 020165 241 DTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYC 277 (330)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfi 277 (330)
+...+..|.+.+.... +||+.||..| .|+=++-
T Consensus 72 T~~dV~~f~~Al~eae---gPVlayCrsG-tRs~~ly 104 (130)
T COG3453 72 TEADVEAFQRALDEAE---GPVLAYCRSG-TRSLNLY 104 (130)
T ss_pred CHHHHHHHHHHHHHhC---CCEEeeecCC-chHHHHH
Confidence 4455666665555443 8999999877 5554433
No 48
>PF02061 Lambda_CIII: Lambda Phage CIII; InterPro: IPR013056 Bacteriophage lambda regulatory protein CIII is a small protein that plays a role in stabilising the CII transcriptional activator, via a mechanism that is not yet fully understood [, ]. Stabilised CII activates CI, the gene for the repressor protein that prevents transcription of proteins required for lytic development. The central portion of the protein is well conserved and is both necessary and sufficient for the activity of the protein []. Comparative analysis of the CIII sequence in lambda, Bacteriophage HK022 and the lambdoid Enterobacteria phage P22 has led to the suggestion that this central region assumes an amphipathic alpha-helical structure []. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=46.95 E-value=28 Score=22.07 Aligned_cols=24 Identities=17% Similarity=0.468 Sum_probs=19.3
Q ss_pred EEecCCCCCCCCCCChHHHHHHHH
Q 020165 227 HIQYPEWPDHGVPRDTLAVREILK 250 (330)
Q Consensus 227 h~~~~~Wpd~~vP~~~~~~~~~~~ 250 (330)
+|++.+||--|+|.-.+++++.+.
T Consensus 2 ~~~~AG~~~~G~~ql~ESLLdrIt 25 (45)
T PF02061_consen 2 QYAIAGWPRMGCPQLSESLLDRIT 25 (45)
T ss_pred eeeecCccccCCchhhHHHHHHHH
Confidence 578899999999977777777653
No 49
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=46.25 E-value=32 Score=25.79 Aligned_cols=17 Identities=18% Similarity=0.376 Sum_probs=13.7
Q ss_pred CCEEEEcCCCCChhHHHH
Q 020165 260 GPIVVHCSAGIGRTGAYC 277 (330)
Q Consensus 260 ~PivVHCs~GvGRtGtfi 277 (330)
.||+|+|..| +||...+
T Consensus 62 ~~ivvyC~~G-~rs~~a~ 78 (101)
T cd01518 62 KKVLMYCTGG-IRCEKAS 78 (101)
T ss_pred CEEEEECCCc-hhHHHHH
Confidence 7999999887 7887543
No 50
>PLN02160 thiosulfate sulfurtransferase
Probab=45.30 E-value=36 Score=27.55 Aligned_cols=16 Identities=31% Similarity=0.549 Sum_probs=13.2
Q ss_pred CCEEEEcCCCCChhHHH
Q 020165 260 GPIVVHCSAGIGRTGAY 276 (330)
Q Consensus 260 ~PivVHCs~GvGRtGtf 276 (330)
.||+|+|..| +||..-
T Consensus 82 ~~IivyC~sG-~RS~~A 97 (136)
T PLN02160 82 DDILVGCQSG-ARSLKA 97 (136)
T ss_pred CcEEEECCCc-HHHHHH
Confidence 7999999988 777644
No 51
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=44.19 E-value=34 Score=25.56 Aligned_cols=16 Identities=19% Similarity=0.370 Sum_probs=12.6
Q ss_pred CCEEEEcCCCCChhHHH
Q 020165 260 GPIVVHCSAGIGRTGAY 276 (330)
Q Consensus 260 ~PivVHCs~GvGRtGtf 276 (330)
.||+|+|..| +||...
T Consensus 62 ~~ivv~C~~G-~rs~~a 77 (100)
T cd01523 62 QEVTVICAKE-GSSQFV 77 (100)
T ss_pred CeEEEEcCCC-CcHHHH
Confidence 7999999988 577543
No 52
>cd05567 PTS_IIB_mannitol PTS_IIB_mannitol: subunit IIB of enzyme II (EII) of the mannitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a mannitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIA, IIB, and IIC domains are expressed from the mtlA gene as a single protein, also known as the mannitol PTS permease, the mtl transporter, or MtlA. MtlA is only functional as a dimer with the dimer contacts occuring between the IIC domains. MtlA takes up exogenous mannitol releasing the phosphate ester into the cytoplasm in preparation for oxidation to fructose-6-phosphate by the NAD-dependent mannitol-P dehydrogenase (MtlD). The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include mannitol, chitobiose/lichenan, ascorbate, lactose, galactitol, fructose, and a s
Probab=43.34 E-value=28 Score=25.71 Aligned_cols=17 Identities=41% Similarity=0.729 Sum_probs=12.8
Q ss_pred CEEEEcCCCCChhHHHHH
Q 020165 261 PIVVHCSAGIGRTGAYCT 278 (330)
Q Consensus 261 PivVHCs~GvGRtGtfia 278 (330)
-|++.|++|.|- +++++
T Consensus 2 kilvvCg~G~gt-S~ml~ 18 (87)
T cd05567 2 KIVFACDAGMGS-SAMGA 18 (87)
T ss_pred EEEEECCCCccH-HHHHH
Confidence 389999999995 45544
No 53
>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=37.55 E-value=33 Score=25.80 Aligned_cols=17 Identities=47% Similarity=0.700 Sum_probs=13.3
Q ss_pred CCCEEEEcCCCCChhHHH
Q 020165 259 FGPIVVHCSAGIGRTGAY 276 (330)
Q Consensus 259 ~~PivVHCs~GvGRtGtf 276 (330)
..|++|+|..| .||+.-
T Consensus 61 ~~~ivv~C~~G-~rS~~a 77 (110)
T COG0607 61 DDPIVVYCASG-VRSAAA 77 (110)
T ss_pred CCeEEEEeCCC-CChHHH
Confidence 38999999999 677543
No 54
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=36.07 E-value=38 Score=31.00 Aligned_cols=50 Identities=16% Similarity=0.311 Sum_probs=24.7
Q ss_pred EecCCCCCCCCCCChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHHHHH
Q 020165 228 IQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTI 279 (330)
Q Consensus 228 ~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtfiai 279 (330)
+.+..+.+.+...+...+..++... ....+ .||+++|..|.--+.++.++
T Consensus 202 i~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~-~~ii~yC~~G~~A~~~~~~l 251 (281)
T PRK11493 202 VPWTELVREGELKTTDELDAIFFGR-GVSFD-RPIIASCGSGVTAAVVVLAL 251 (281)
T ss_pred CCHHHhcCCCCcCCHHHHHHHHHhc-CCCCC-CCEEEECCcHHHHHHHHHHH
Confidence 3334443333333445554444322 12333 69999998886444333333
No 55
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=33.59 E-value=77 Score=24.05 Aligned_cols=14 Identities=43% Similarity=0.755 Sum_probs=11.4
Q ss_pred CCEEEEcCCCCChhH
Q 020165 260 GPIVVHCSAGIGRTG 274 (330)
Q Consensus 260 ~PivVHCs~GvGRtG 274 (330)
.||+|+|..|. |+.
T Consensus 67 ~~ivv~C~~G~-rs~ 80 (109)
T cd01533 67 TPIVVNCAGRT-RSI 80 (109)
T ss_pred CeEEEECCCCc-hHH
Confidence 69999999884 663
No 56
>KOG2386 consensus mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification]
Probab=32.84 E-value=31 Score=33.31 Aligned_cols=50 Identities=28% Similarity=0.380 Sum_probs=29.7
Q ss_pred CCCCCC-CCC--ChHHHHHHHHHHHc-CCCCCCCEEEEcCCCCChhHHHHHHHH
Q 020165 232 EWPDHG-VPR--DTLAVREILKRIYN-LPPNFGPIVVHCSAGIGRTGAYCTIHN 281 (330)
Q Consensus 232 ~Wpd~~-vP~--~~~~~~~~~~~~~~-~~~~~~PivVHCs~GvGRtGtfiai~~ 281 (330)
.=+.++ +|. +...+..+++.... ......=|.|||..|..|||-+|+...
T Consensus 93 ~c~g~~~vp~~~~v~~fv~~v~~f~~~~~~~~~LI~vhcthG~NrtgyLI~~yL 146 (393)
T KOG2386|consen 93 NCPGRGVVPRTELVDKFVKLVKGFVDDTKLDDELIGVHCTHGLNRTGYLICAYL 146 (393)
T ss_pred ccCCcccCCCccchHHHHHHHHHHHhcccCCCCEEEEeCCCcccccceeeeeee
Confidence 334445 553 23445555543322 222225699999999999998876543
No 57
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=32.18 E-value=1.2e+02 Score=23.47 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=19.7
Q ss_pred ChHHHHHHHHHHHcCCCCCCCEEEEcCCCCChhHHH
Q 020165 241 DTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAY 276 (330)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGtf 276 (330)
+...+.+++.... ... ..||+|+|..| |+.+..
T Consensus 63 ~~~~~~~~~~~~~-~~~-~~~vv~~c~~g-~~~a~~ 95 (122)
T cd01448 63 SPEEFAELLGSLG-ISN-DDTVVVYDDGG-GFFAAR 95 (122)
T ss_pred CHHHHHHHHHHcC-CCC-CCEEEEECCCC-CccHHH
Confidence 4556666654432 222 37999999988 444444
No 58
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=31.38 E-value=74 Score=25.56 Aligned_cols=28 Identities=32% Similarity=0.472 Sum_probs=14.0
Q ss_pred HHHHHHHHHHcCC-CCCCCEEEEcCCCCC
Q 020165 244 AVREILKRIYNLP-PNFGPIVVHCSAGIG 271 (330)
Q Consensus 244 ~~~~~~~~~~~~~-~~~~PivVHCs~GvG 271 (330)
.+-.+...+.... ...+.+|||||...+
T Consensus 80 aI~~va~~La~~~~~~~g~iVvHtSGa~~ 108 (127)
T PF10727_consen 80 AIAEVAEQLAQYGAWRPGQIVVHTSGALG 108 (127)
T ss_dssp HHHHHHHHHHCC--S-TT-EEEES-SS--
T ss_pred HHHHHHHHHHHhccCCCCcEEEECCCCCh
Confidence 4555666665441 123789999996554
No 59
>COG5495 Uncharacterized conserved protein [Function unknown]
Probab=31.38 E-value=48 Score=29.79 Aligned_cols=17 Identities=47% Similarity=0.835 Sum_probs=11.8
Q ss_pred CCCEEEEcCCCCChhHHH
Q 020165 259 FGPIVVHCSAGIGRTGAY 276 (330)
Q Consensus 259 ~~PivVHCs~GvGRtGtf 276 (330)
.+-||+||| |.+-+|.|
T Consensus 91 pg~iv~HcS-ga~~~~il 107 (289)
T COG5495 91 PGTIVAHCS-GANGSGIL 107 (289)
T ss_pred CCeEEEEcc-CCCchhhh
Confidence 378999999 44545554
No 60
>PF06165 Glyco_transf_36: Glycosyltransferase family 36; InterPro: IPR010383 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyltransferase family 36 includes cellobiose phosphorylase (2.4.1.20 from EC), cellodextrin phosphorylase (2.4.1.49 from EC), and chitobiose phosphorylase. Many members of this family contain two copies of the domain represented in this entry.; PDB: 3QDE_A 3RRS_B 1V7V_A 1V7W_A 1V7X_A 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A ....
Probab=30.99 E-value=1.4e+02 Score=23.11 Aligned_cols=42 Identities=19% Similarity=0.397 Sum_probs=26.7
Q ss_pred ccceEEEEEeeeecccEEEEEEEeeecCCCCCceEEEEEecCCC
Q 020165 190 GNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEW 233 (330)
Q Consensus 190 g~~~V~~~~~~~~~~~~~~r~l~v~~~~~~~~~r~v~h~~~~~W 233 (330)
+++.+++.-.-..+....++.|+|++.... .|.+..+-|..|
T Consensus 48 ~gi~~~~~v~V~~~~~vEi~~l~l~N~~~~--~r~L~vtsy~E~ 89 (110)
T PF06165_consen 48 GGIETELTVFVPPDDPVEIRRLRLTNTSNR--PRRLSVTSYAEW 89 (110)
T ss_dssp TTEEEEEEEE--TTSSEEEEEEEEEE-SSS---EEEEEEEEEEE
T ss_pred CCEEEEEEEEEcCCCCEEEEEEEEEECcCC--cEEEEEEEEEEE
Confidence 444444433333356789999999987654 478888888877
No 61
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=30.81 E-value=11 Score=37.77 Aligned_cols=28 Identities=29% Similarity=0.517 Sum_probs=24.4
Q ss_pred cceeeecCCCCCCHHHHHHHHHhccCCe
Q 020165 133 SQFIATQGPLPHTYEDFWEMVIQYHCPV 160 (330)
Q Consensus 133 ~~yI~tQ~Pl~~T~~dFW~MV~e~~v~~ 160 (330)
++||++|||..+.+.-=|.-||.-|-.+
T Consensus 475 kqfIl~QG~Sk~v~~meWdkiWAfNKKv 502 (712)
T KOG1147|consen 475 KQFILAQGPSKNVVTMEWDKIWAFNKKV 502 (712)
T ss_pred HHHHHHhCCccceeeeehHhhhhhcccc
Confidence 6899999999999999999999776443
No 62
>PRK10310 PTS system galactitol-specific transporter subunit IIB; Provisional
Probab=27.76 E-value=59 Score=24.49 Aligned_cols=17 Identities=24% Similarity=0.589 Sum_probs=12.5
Q ss_pred CEEEEcCCCCChhHHHHH
Q 020165 261 PIVVHCSAGIGRTGAYCT 278 (330)
Q Consensus 261 PivVHCs~GvGRtGtfia 278 (330)
-|+|.|.+|+| |+++++
T Consensus 4 kILvvCgsG~~-TS~m~~ 20 (94)
T PRK10310 4 KIIVACGGAVA-TSTMAA 20 (94)
T ss_pred eEEEECCCchh-HHHHHH
Confidence 38999999998 444443
No 63
>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein. Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.
Probab=27.26 E-value=1.1e+02 Score=25.53 Aligned_cols=17 Identities=24% Similarity=0.168 Sum_probs=14.1
Q ss_pred CCCEEEEcCCCCChhHH
Q 020165 259 FGPIVVHCSAGIGRTGA 275 (330)
Q Consensus 259 ~~PivVHCs~GvGRtGt 275 (330)
..||||.|..|..|+..
T Consensus 116 d~~IVvYC~~G~~~S~~ 132 (162)
T TIGR03865 116 DRPLVFYCLADCWMSWN 132 (162)
T ss_pred CCEEEEEECCCCHHHHH
Confidence 37999999988777765
No 64
>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=26.61 E-value=75 Score=25.80 Aligned_cols=28 Identities=29% Similarity=0.422 Sum_probs=18.0
Q ss_pred HHHHHHHcCCCC-CCCEEEEcCCCCChhHH
Q 020165 247 EILKRIYNLPPN-FGPIVVHCSAGIGRTGA 275 (330)
Q Consensus 247 ~~~~~~~~~~~~-~~PivVHCs~GvGRtGt 275 (330)
+|++.+....+. ...||++|-.| .|+..
T Consensus 76 eF~kqvg~~kp~~d~eiIf~C~SG-~Rs~~ 104 (136)
T KOG1530|consen 76 EFLKQVGSSKPPHDKEIIFGCASG-VRSLK 104 (136)
T ss_pred HHHHHhcccCCCCCCcEEEEeccC-cchhH
Confidence 455555444332 25899999999 56644
No 65
>TIGR00853 pts-lac PTS system, lactose/cellobiose family IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Lac family includes several sequenced lactose (b-galactoside) permeases of Gram-positive bacteria as well as those in E. coli. While the Lac family usually consists of two polypeptide components IIA and IICB, the Chb permease of E. coli consists of three IIA, IIB and IIC. This family is specific for the IIB subunit of the Lac PTS family.
Probab=23.75 E-value=1.1e+02 Score=23.11 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=16.1
Q ss_pred CCEEEEcCCCCChhHHHHHHHHHHHHHH
Q 020165 260 GPIVVHCSAGIGRTGAYCTIHNTVQRIL 287 (330)
Q Consensus 260 ~PivVHCs~GvGRtGtfiai~~~~~~l~ 287 (330)
.-|++-|.+|++ |+. .+ .-+-+.+.
T Consensus 4 ~~ILl~C~~G~s-SS~-l~-~k~~~~~~ 28 (95)
T TIGR00853 4 TNILLLCAAGMS-TSL-LV-NKMNKAAE 28 (95)
T ss_pred cEEEEECCCchh-HHH-HH-HHHHHHHH
Confidence 358999999998 554 22 44444444
No 66
>PF14532 Sigma54_activ_2: Sigma-54 interaction domain; PDB: 3CO5_B 3N70_H.
Probab=23.01 E-value=80 Score=25.19 Aligned_cols=32 Identities=19% Similarity=0.433 Sum_probs=21.2
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEcCCCCChhHH
Q 020165 244 AVREILKRIYNLPPNFGPIVVHCSAGIGRTGA 275 (330)
Q Consensus 244 ~~~~~~~~~~~~~~~~~PivVHCs~GvGRtGt 275 (330)
.+.++.+.+.+......||++..-.|.|++-+
T Consensus 6 ~~~~l~~~l~~~a~~~~pvli~GE~GtGK~~~ 37 (138)
T PF14532_consen 6 AMRRLRRQLERLAKSSSPVLITGEPGTGKSLL 37 (138)
T ss_dssp HHHHHHHHHHHHHCSSS-EEEECCTTSSHHHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEcCCCCCHHHH
Confidence 34455555554444458999999999999853
No 67
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=22.40 E-value=1.5e+02 Score=29.28 Aligned_cols=56 Identities=18% Similarity=0.395 Sum_probs=36.2
Q ss_pred EEecCCCCCCCCCCChHHHHHHHHHHHcCCCCCCCEEEEc---CCCCChhHHHHHHHHHHHHHH
Q 020165 227 HIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPIVVHC---SAGIGRTGAYCTIHNTVQRIL 287 (330)
Q Consensus 227 h~~~~~Wpd~~vP~~~~~~~~~~~~~~~~~~~~~PivVHC---s~GvGRtGtfiai~~~~~~l~ 287 (330)
-||=+-||..+.- .-+.++..+.......-+|||- .+|+|+..+-.|+++++++-.
T Consensus 217 wf~p~f~p~r~l~-----~e~al~~~ntaaariarvvvhpdyr~dglg~~sv~~a~ewI~eRri 275 (593)
T COG2401 217 WFHPTFWPERELR-----KEEALRECNTAAARIARVVVHPDYRADGLGQLSVIAALEWIIERRI 275 (593)
T ss_pred hcCCcccchhhhh-----HHHHHHHhhhhhhheeEEEeccccccCccchhHHHHHHHHHHHhhC
Confidence 3455566664432 2233443333333346799996 699999999999999998753
No 68
>PF02302 PTS_IIB: PTS system, Lactose/Cellobiose specific IIB subunit; InterPro: IPR003501 The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes. The fold of IIB cellobiose shows similar structure to mammalian tyrosine phosphatases. This signature is often found downstream of IPR003352 from INTERPRO.; GO: 0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system; PDB: 1TVM_A 2WY2_D 1IIB_A 2WWV_D 1H9C_A 1E2B_A 2L2Q_A 2KYR_A 3CZC_A 3NBM_A ....
Probab=22.37 E-value=1.1e+02 Score=22.25 Aligned_cols=12 Identities=50% Similarity=1.074 Sum_probs=10.3
Q ss_pred EEEEcCCCCChh
Q 020165 262 IVVHCSAGIGRT 273 (330)
Q Consensus 262 ivVHCs~GvGRt 273 (330)
|++.|.+|+|-|
T Consensus 2 IlvvC~~Gi~TS 13 (90)
T PF02302_consen 2 ILVVCGSGIGTS 13 (90)
T ss_dssp EEEEESSSSHHH
T ss_pred EEEECCChHHHH
Confidence 789999999854
No 69
>COG5178 PRP8 U5 snRNP spliceosome subunit [RNA processing and modification]
Probab=21.57 E-value=85 Score=34.69 Aligned_cols=19 Identities=37% Similarity=0.532 Sum_probs=13.6
Q ss_pred CCCCCCCCCCCCCCCCCCC
Q 020165 1 MAASSAGNHSTPHNTKPFE 19 (330)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~ 19 (330)
||+-|+|++.||.++|-+.
T Consensus 1 ma~lppg~ppppppppg~e 19 (2365)
T COG5178 1 MASLPPGNPPPPPPPPGFE 19 (2365)
T ss_pred CCCCCCCCCcccccCCCCC
Confidence 7888999977776555443
No 70
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=21.02 E-value=2e+02 Score=22.53 Aligned_cols=19 Identities=16% Similarity=0.286 Sum_probs=13.8
Q ss_pred CCCEEEEcCCCCChhHHHH
Q 020165 259 FGPIVVHCSAGIGRTGAYC 277 (330)
Q Consensus 259 ~~PivVHCs~GvGRtGtfi 277 (330)
..||+|.|..|..||...+
T Consensus 86 ~~~vvvyC~~~G~rs~~a~ 104 (128)
T cd01520 86 DPKLLIYCARGGMRSQSLA 104 (128)
T ss_pred CCeEEEEeCCCCccHHHHH
Confidence 3799999975556776554
No 71
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=20.64 E-value=1.8e+02 Score=21.60 Aligned_cols=16 Identities=31% Similarity=0.602 Sum_probs=11.8
Q ss_pred CCCEEEEcCCCCChhHH
Q 020165 259 FGPIVVHCSAGIGRTGA 275 (330)
Q Consensus 259 ~~PivVHCs~GvGRtGt 275 (330)
..||||+|..|. |+..
T Consensus 66 ~~~ivv~c~~g~-~s~~ 81 (106)
T cd01519 66 DKELIFYCKAGV-RSKA 81 (106)
T ss_pred CCeEEEECCCcH-HHHH
Confidence 379999999874 5533
No 72
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=20.06 E-value=2.2e+02 Score=20.52 Aligned_cols=16 Identities=31% Similarity=0.567 Sum_probs=11.4
Q ss_pred CCCEEEEcCCCCChhHH
Q 020165 259 FGPIVVHCSAGIGRTGA 275 (330)
Q Consensus 259 ~~PivVHCs~GvGRtGt 275 (330)
..||+|+|..| .|+..
T Consensus 56 ~~~ivv~c~~g-~~s~~ 71 (96)
T cd01444 56 DRPVVVYCYHG-NSSAQ 71 (96)
T ss_pred CCCEEEEeCCC-ChHHH
Confidence 37999999966 44433
Done!