BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020168
(330 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A
MUTANT
Length = 554
Score = 358 bits (919), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/240 (71%), Positives = 199/240 (82%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 120
ILSG+ +E VQD ETAGGVMTVLI RNTTIPTK+ Q F+TYSD
Sbjct: 374 AVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSD 433
Query: 121 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK 180
NQPGVLIQVYEGER T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK
Sbjct: 434 NQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDK 493
Query: 181 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTI 240
+TG++NKITITNDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE+YA+NM+ T+
Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 554
Score = 358 bits (918), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 172/240 (71%), Positives = 199/240 (82%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 120
ILSG+ +E VQD ETAGGVMTVLI RNTTIPTK+ Q F+TYSD
Sbjct: 374 AVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSD 433
Query: 121 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK 180
NQPGVLIQVYEGER T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK
Sbjct: 434 NQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDK 493
Query: 181 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTI 240
+TG++NKITITNDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE+YA+NM+ T+
Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
Length = 543
Score = 343 bits (881), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 167/230 (72%), Positives = 190/230 (82%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 120
ILSG+ +E VQD ETAGGVMTVLI RNTTIPTK+ Q F+TYSD
Sbjct: 374 AVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSD 433
Query: 121 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK 180
NQPGVLIQVYEGER T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK
Sbjct: 434 NQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDK 493
Query: 181 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALE 230
+TG++NKITITNDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE
Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 543
>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
pdb|7HSC|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
Length = 159
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/159 (74%), Positives = 134/159 (84%)
Query: 72 NEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYE 131
+E VQD ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYE
Sbjct: 1 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 60
Query: 132 GERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITIT 191
GER T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+TG++NKITIT
Sbjct: 61 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 120
Query: 192 NDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALE 230
NDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE
Sbjct: 121 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 213 bits (543), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 174/294 (59%), Gaps = 11/294 (3%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EP++ L+DA + S + DV+LVGG TR+P VQ+ + +FF GKE K +NPDE
Sbjct: 317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGA 375
Query: 61 XXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 120
+L+G+ V+D ET GGVMT LI +NTTIPTK QVFST D
Sbjct: 376 AVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAED 431
Query: 121 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK 180
NQ V I V +GER R DN LG+F L GI PAPRG+PQI V FDIDA+GIL+VSA+DK
Sbjct: 432 NQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDK 491
Query: 181 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTI 240
+G++ KITI G L+++EI+KMV++AE D + + V+ +N ++ ++ R +
Sbjct: 492 NSGKEQKITIKASSG-LNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQV 550
Query: 241 KDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPII 294
E+ KLP DK IE A+ L G A E KM+EL + ++
Sbjct: 551 --EEAGDKLPADDKTAIESALTALETALKGEDKA---AIEAKMQELAQVSQKLM 599
>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2
Protein From Saccharomyces Cerevisiae
Length = 152
Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 115/140 (82%)
Query: 91 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSG 150
ET GGVMT LI RNT IPTKK Q+FST DNQP V+I+VYEGER ++DNNLLGKFEL+G
Sbjct: 13 ETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTG 72
Query: 151 IPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAE 210
IPPAPRGVPQI V F +DANGIL VSA DK TG+ ITITNDKGRL++EEI++MV+EAE
Sbjct: 73 IPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAE 132
Query: 211 KYKAEDDEHKKKVEAKNALE 230
K+ +ED K KVE++N LE
Sbjct: 133 KFASEDASIKAKVESRNKLE 152
>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein
F44e5.5 From C.Elegans.
pdb|3DOB|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein
F44e5.5 From C.Elegans
Length = 152
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 119/140 (85%)
Query: 91 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSG 150
ETAGGVMT LI RNT IPTK + F+TY+DNQPGV IQVYEGER TRDN+ LG FELSG
Sbjct: 13 ETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSG 72
Query: 151 IPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAE 210
IPPAPRGVPQI V F+IDANGILNVSAEDK+TG+ N+ITI N+KGRL++ +I++MV EA+
Sbjct: 73 IPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAK 132
Query: 211 KYKAEDDEHKKKVEAKNALE 230
+++ ED E +++V+A+N LE
Sbjct: 133 QFEKEDGEQRERVQARNQLE 152
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|B Chain B, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|C Chain C, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|D Chain D, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
Length = 605
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/261 (44%), Positives = 159/261 (60%), Gaps = 8/261 (3%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EP++ L+DA + S + DV+LVGG TR P VQ+ + +FF GKE K +NPDE
Sbjct: 317 IEPLKVALQDAGLSVSDIDDVILVGGQTRXPXVQKKVAEFF-GKEPRKDVNPDEAVAIGA 375
Query: 61 XXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 120
+L+G+ V+D ET GGV T LI +NTTIPTK QVFST D
Sbjct: 376 AVQGGVLTGD----VKDVLLLDVTPLSLGIETXGGVXTTLIAKNTTIPTKHSQVFSTAED 431
Query: 121 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK 180
NQ V I V +GER R DN LG+F L GI PAPRG PQI V FDIDA+GIL+VSA+DK
Sbjct: 432 NQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGXPQIEVTFDIDADGILHVSAKDK 491
Query: 181 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTI 240
+G++ KITI G L+++EI+K V++AE D + ++ V+ +N ++ ++ R +
Sbjct: 492 NSGKEQKITIKASSG-LNEDEIQKXVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQV 550
Query: 241 KDEKISAKLPTADKKKIEDAI 261
E+ KLP DK IE A+
Sbjct: 551 --EEAGDKLPADDKTAIESAL 569
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 142/227 (62%), Gaps = 6/227 (2%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
M PV + L+DA + + + V+LVGGSTRIP VQ+ ++ GKE K +NPDE
Sbjct: 286 MGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGA 344
Query: 61 XXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSD 120
+++GE V+D ET GGV T LI RNTTIPT K QVF+T +D
Sbjct: 345 AIQGGVIAGE----VKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAAD 400
Query: 121 NQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDK 180
NQ V I V +GER DN LG+F+L+GIPPAPRGVPQI V FDIDANGI++V A+D
Sbjct: 401 NQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRAKDL 460
Query: 181 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKN 227
T ++ ITI + G LS+EEI++M++EAE+ D + K+ E +N
Sbjct: 461 GTNKEQSITIKSSSG-LSEEEIQRMIKEAEENAEADRKRKEAAELRN 506
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D
Precursor From C.Elegans
Length = 152
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 110/140 (78%)
Query: 91 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSG 150
ET GGVMT LI RNT IPTKK QVFST +D+Q V I +YEGER DN+ LG F+++G
Sbjct: 13 ETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTG 72
Query: 151 IPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAE 210
IPPAPRGVPQI V F+ID NGIL+VSAEDK TG KNK+TITND RLS E+IE+M+ +A+
Sbjct: 73 IPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDAD 132
Query: 211 KYKAEDDEHKKKVEAKNALE 230
K+ A+D K+KVE++N LE
Sbjct: 133 KFAADDQAQKEKVESRNELE 152
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPO|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPP|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPP|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPQ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|E Chain E, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|F Chain F, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3QNJ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|3QNJ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|4E81|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
pdb|4E81|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
Length = 219
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 128/204 (62%), Gaps = 6/204 (2%)
Query: 91 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSG 150
ET GGVMT LI +NTTIPTK QVFST DNQ V I V +GER R DN LG+F L G
Sbjct: 14 ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDG 73
Query: 151 IPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAE 210
I PAPRG+PQI V FDIDA+GIL+VSA+DK +G++ KITI G L+++EI+KMV++AE
Sbjct: 74 INPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAE 132
Query: 211 KYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDG 270
D + ++ V+ +N ++ ++ R + E+ KLP DK IE A+ L G
Sbjct: 133 ANAEADRKFEELVQTRNQGDHLLHSTRKQV--EEAGDKLPADDKTAIESALTALETALKG 190
Query: 271 NQLAEADEFEDKMKELEGICNPII 294
A E KM+EL + ++
Sbjct: 191 EDKA---AIEAKMQELAQVSQKLM 211
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKY|B Chain B, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKZ|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1 Native
Crystals
Length = 219
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 128/204 (62%), Gaps = 6/204 (2%)
Query: 91 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSG 150
ET GGVMT LI +NTTIPTK QVFST DNQ V I V +GER R DN LG+F L G
Sbjct: 14 ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRAADNKSLGQFNLDG 73
Query: 151 IPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAE 210
I PAPRG+PQI V FDIDA+GIL+VSA+DK +G++ KITI G L+++EI+KMV++AE
Sbjct: 74 INPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAE 132
Query: 211 KYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDG 270
D + ++ V+ +N ++ ++ R + E+ KLP DK IE A+ L G
Sbjct: 133 ANAEADRKFEELVQTRNQGDHLLHSTRKQV--EEAGDKLPADDKTAIESALTALETALKG 190
Query: 271 NQLAEADEFEDKMKELEGICNPII 294
A E KM+EL + ++
Sbjct: 191 EDKA---AIEAKMQELAQVSQKLM 211
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1
Selenomethionyl Crystals
Length = 219
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 127/204 (62%), Gaps = 6/204 (2%)
Query: 91 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSG 150
ET GGVMT LI +NTTIPTK QVFST DNQ V I V +GER R DN LG+F L G
Sbjct: 14 ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDG 73
Query: 151 IPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAE 210
I PAPRG+PQI V FDIDA+GIL+VSA+DK +G++ KITI G L+++EI+KMV++AE
Sbjct: 74 INPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAE 132
Query: 211 KYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDG 270
D + + V+ +N ++ ++ R + E+ KLP DK IE A+ L G
Sbjct: 133 ANAEADRKFDELVQTRNQGDHLLHSTRKQV--EEAGDKLPADDKTAIESALTALETALKG 190
Query: 271 NQLAEADEFEDKMKELEGICNPII 294
A E KM+EL + ++
Sbjct: 191 EDKA---AIEAKMQELAQVSQKLM 211
>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|C Chain C, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|D Chain D, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans
Length = 151
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 103/140 (73%), Gaps = 1/140 (0%)
Query: 91 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSG 150
ET GG+MT LI RNTTIPTKK QVFST +D Q V I+V++GER N LLG+F L G
Sbjct: 13 ETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVG 72
Query: 151 IPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAE 210
IPPAPRGVPQ+ V FDIDANGI+NVSA D+ TG++ +I I + G LSK++IE M++EAE
Sbjct: 73 IPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGG-LSKDQIENMIKEAE 131
Query: 211 KYKAEDDEHKKKVEAKNALE 230
K AED + K+ VE N E
Sbjct: 132 KNAAEDAKRKELVEVINQAE 151
>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda
Prote (Mortalin)
pdb|3N8E|B Chain B, Substrate Binding Domain Of The Human Heat Shock 70kda
Prote (Mortalin)
Length = 182
Score = 164 bits (414), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
Query: 91 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSG 150
ET GGV T LI RNTTIPTKK QVFST +D Q V I+V +GER DN LLG+F L G
Sbjct: 33 ETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIG 92
Query: 151 IPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAE 210
IPPAPRGVPQI V FDIDANGI++VSA+DK TG++ +I I + G LSK++IE MV+ AE
Sbjct: 93 IPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGG-LSKDDIENMVKNAE 151
Query: 211 KYKAEDDEHKKKVEAKNALENYAYN 235
KY ED K++VEA N E ++
Sbjct: 152 KYAEEDRRKKERVEAVNMAEGIIHD 176
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak,
Minimized Average Structure
pdb|2BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, 25
Structures
Length = 191
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 111/163 (68%), Gaps = 3/163 (1%)
Query: 91 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSG 150
ET GGVMT LI +NTTIPTK QVFST DNQ V I V +GER R DN LG+F L G
Sbjct: 32 ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDG 91
Query: 151 IPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAE 210
I PAPRG+PQI V FDIDA+GIL+VSA+DK +G++ KITI G L+++EI+KMV++AE
Sbjct: 92 INPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAE 150
Query: 211 KYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTAD 253
D + ++ V+ +N ++ ++ R + E+ KLP D
Sbjct: 151 ANAEADRKFEELVQTRNQGDHLLHSTRKQV--EEAGDKLPADD 191
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In
The Apo Form
Length = 115
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 77/105 (73%)
Query: 91 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSG 150
ET GGVMT LI +NTTIPTK QVFST DNQ V I V +GER R DN LG+F L G
Sbjct: 10 ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDG 69
Query: 151 IPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKG 195
I PAPRG+PQI V FDIDA+GIL+VSA+DK +G++ KITI G
Sbjct: 70 INPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 114
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak
Bound To The Peptide Nrllltg
Length = 135
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 77/105 (73%)
Query: 91 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSG 150
ET GGVMT LI +NTTIPTK QVFST DNQ V I V +GER R DN LG+F L G
Sbjct: 30 ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDG 89
Query: 151 IPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKG 195
I PAPRG+PQI V FDIDA+GIL+VSA+DK +G++ KITI G
Sbjct: 90 INPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 134
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 61/77 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNEKVQD 77
ILSG+ +E VQD
Sbjct: 374 AVQAAILSGDKSENVQD 390
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 61/77 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNEKVQD 77
ILSG+ +E VQD
Sbjct: 374 AVQAAILSGDKSENVQD 390
>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu
Recognition Peptide Elppvkihc
Length = 227
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 104/194 (53%), Gaps = 18/194 (9%)
Query: 91 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSG 150
ET GG++ +IPRNTTIP + Q F+T+ D Q + I V +GER +D L +F L G
Sbjct: 11 ETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRG 70
Query: 151 IPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAE 210
IP P G I V F +DA+G+L+V+A +K+TG + I + G L+ EI M++++
Sbjct: 71 IPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG-LTDSEIASMIKDSM 129
Query: 211 KYKAEDDEHK----KKVEAKNALENY-----------AYNMRNTIKDEKISAKLPTADKK 255
Y +D + + +KVEA LE+ + R I D +A L +
Sbjct: 130 SYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDA--AAHLSEVAQG 187
Query: 256 KIEDAIEEAIQWLD 269
DAIE+AI+ +D
Sbjct: 188 DDVDAIEQAIKNVD 201
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
1nge 3
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In The
Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A
70k Heat-Shock Cognate Protein
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILSGEGNE 73
ILSG+ +E
Sbjct: 374 AVQAAILSGDKSE 386
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 403
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 55/70 (78%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVEK LRDAK+DK+ +HDVVLVGGSTRIPKVQ+LLQDFFNGKEL KSINPDE
Sbjct: 334 LEPVEKALRDAKLDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGA 393
Query: 61 XXXXXILSGE 70
+L G+
Sbjct: 394 AVQAAVLMGD 403
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 58/75 (77%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE
Sbjct: 317 LEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGA 376
Query: 61 XXXXXILSGEGNEKV 75
IL G+ +E V
Sbjct: 377 AVQAAILMGDKSENV 391
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The
Apo Form
Length = 391
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 58/75 (77%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE
Sbjct: 317 LEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGA 376
Query: 61 XXXXXILSGEGNEKV 75
IL G+ +E V
Sbjct: 377 AVQAAILMGDKSENV 391
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound And
Mg Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg Ion-,
And K Ion- Bound State
Length = 392
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 58/75 (77%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE
Sbjct: 318 LEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGA 377
Query: 61 XXXXXILSGEGNEKV 75
IL G+ +E V
Sbjct: 378 AVQAAILMGDKSENV 392
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 311 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 370
Query: 61 XXXXXILS 68
ILS
Sbjct: 371 AVQAAILS 378
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 311 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 370
Query: 61 XXXXXILS 68
ILS
Sbjct: 371 AVQAAILS 378
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant
Length = 381
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILS 68
ILS
Sbjct: 374 AVQAAILS 381
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant
Length = 381
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILS 68
ILS
Sbjct: 374 AVQAAILS 381
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 311 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 370
Query: 61 XXXXXILS 68
ILS
Sbjct: 371 AVQAAILS 378
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant
Length = 381
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILS 68
ILS
Sbjct: 374 AVQAAILS 381
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 319 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 378
Query: 61 XXXXXILS 68
ILS
Sbjct: 379 AVQAAILS 386
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILS 68
ILS
Sbjct: 374 AVQAAILS 381
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 333 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 392
Query: 61 XXXXXILS 68
ILS
Sbjct: 393 AVQAAILS 400
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 373
Query: 61 XXXXXILS 68
ILS
Sbjct: 374 AVQAAILS 381
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a
(Hsp70-1) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 409
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 57/73 (78%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE
Sbjct: 336 LEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGA 395
Query: 61 XXXXXILSGEGNE 73
IL G+ +E
Sbjct: 396 AVQAAILMGDKSE 408
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 55/70 (78%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L KSINPDE
Sbjct: 338 LEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGA 397
Query: 61 XXXXXILSGE 70
IL G+
Sbjct: 398 AVQAAILMGD 407
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 54/69 (78%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE
Sbjct: 314 LEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGA 373
Query: 61 XXXXXILSG 69
IL G
Sbjct: 374 AVQAAILXG 382
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 54/69 (78%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE
Sbjct: 314 LEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGA 373
Query: 61 XXXXXILSG 69
IL G
Sbjct: 374 AVQAAILMG 382
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 54/69 (78%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE
Sbjct: 314 LEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGA 373
Query: 61 XXXXXILSG 69
IL G
Sbjct: 374 AVQAAILMG 382
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 54/69 (78%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE
Sbjct: 312 LEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGA 371
Query: 61 XXXXXILSG 69
IL G
Sbjct: 372 AVQAAILMG 380
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3KVG|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3L4I|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L4I|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L6Q|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
pdb|3L6Q|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
Length = 400
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 53/70 (75%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+ PVEK L+DA MDK SVHDVVLVGGSTRIPKVQ L+Q+FFNGKE CK+INPDE
Sbjct: 331 LAPVEKVLKDAGMDKRSVHDVVLVGGSTRIPKVQALIQEFFNGKEPCKAINPDEAVAYGA 390
Query: 61 XXXXXILSGE 70
IL+GE
Sbjct: 391 AVQAAILNGE 400
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|D Chain D, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 191
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 51/54 (94%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDE 54
+EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE
Sbjct: 134 LEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDE 187
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2)
From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVEK LRDAK+DK + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 317 LEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 376
Query: 61 XXXXXILSGE 70
IL G+
Sbjct: 377 AVQAAILIGD 386
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2
(Hsp70-2) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 404
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVEK LRDAK+DK + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE
Sbjct: 335 LEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 394
Query: 61 XXXXXILSGE 70
IL G+
Sbjct: 395 AVQAAILIGD 404
>pdb|3LOF|A Chain A, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|B Chain B, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|C Chain C, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|D Chain D, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|E Chain E, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|F Chain F, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b
Length = 113
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%)
Query: 222 KVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFED 281
+V AKNALE+YA+N ++ ++DE + K+ ADKKK+ D +E I WLD N LAE DEFE
Sbjct: 7 RVSAKNALESYAFNXKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEH 66
Query: 282 KMKELEGICNPIIAKMY 298
K KELE +CNPII+ +Y
Sbjct: 67 KRKELEQVCNPIISGLY 83
>pdb|2LMG|A Chain A, Solution Structure Of The C-Terminal Domain (537-610) Of
Human Heat Shock Protein 70
Length = 75
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 55/73 (75%)
Query: 225 AKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMK 284
AKNALE+YA+NM++ ++DE + K+ ADKKK+ D +E I WLD N LAE DEFE K K
Sbjct: 3 AKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRK 62
Query: 285 ELEGICNPIIAKM 297
ELE +CNPII+ +
Sbjct: 63 ELEQVCNPIISGL 75
>pdb|2P32|A Chain A, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|B Chain B, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|C Chain C, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|D Chain D, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|E Chain E, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|F Chain F, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
Length = 120
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 56/73 (76%)
Query: 228 ALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELE 287
LE+YA+N++ TI+DEK+ K+ DKKKIED +E ++WLD NQ AE +EFE + K+LE
Sbjct: 22 GLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLE 81
Query: 288 GICNPIIAKMYQG 300
G+ NPII+K+YQ
Sbjct: 82 GLANPIISKLYQS 94
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 51/68 (75%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
+EPVE+ L+DAK+ KS + +VVLVGGSTRIPKVQ+LL DFF+GK+L KSINPDE
Sbjct: 320 LEPVEQVLKDAKISKSQIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGA 379
Query: 61 XXXXXILS 68
IL+
Sbjct: 380 AVQGAILT 387
>pdb|1UD0|A Chain A, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|B Chain B, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|C Chain C, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|D Chain D, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
Length = 113
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 52/73 (71%)
Query: 227 NALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKEL 286
+ LE+YA+N + T++DEK+ K+ DK+KI D E I WLD NQ AE +EFE + KEL
Sbjct: 7 HXLESYAFNXKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKEL 66
Query: 287 EGICNPIIAKMYQ 299
E +CNPII K+YQ
Sbjct: 67 EKVCNPIITKLYQ 79
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
pdb|3IUC|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
Length = 408
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 50/70 (71%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE + INPDE
Sbjct: 337 MKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGA 396
Query: 61 XXXXXILSGE 70
+LSG+
Sbjct: 397 AVQAGVLSGD 406
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDL|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDN|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDN|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDO|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDO|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDP|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
pdb|3LDP|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
Length = 384
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
M+PV+K L D+ + KS + ++VLVGGSTRIPK+QQL+++FFNGKE + INPDE
Sbjct: 316 MKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGA 375
Query: 61 XXXXXILSG 69
+LSG
Sbjct: 376 AVQAGVLSG 384
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN
pdb|3QML|A Chain A, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
pdb|3QML|B Chain B, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
Length = 390
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK L+D+ ++K V D+VLVGGSTRIPKVQQLL+ +F+GK+ K INPDE
Sbjct: 323 LKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGA 382
Query: 61 XXXXXILS 68
+LS
Sbjct: 383 AVQAGVLS 390
>pdb|3QFU|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXED WITH
ADP
Length = 394
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXX 60
++PVEK L+D+ ++K V D+VLVGGSTRIPKVQQLL+ +F+GK+ K INPDE
Sbjct: 327 LKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGA 386
Query: 61 XXXXXILS 68
+LS
Sbjct: 387 AVQAGVLS 394
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe
Bound To The Atpase Domain Of The Molecular Chaperone
Dnak
Length = 383
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 1 MEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDE 54
+E ++ L+DA + S + DV+LVGG TR+P VQ+ + +FF GKE K +NPDE
Sbjct: 317 IELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDE 369
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 675
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 25/284 (8%)
Query: 2 EPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXX 61
EPV K L AK+ V V ++GG+TRIP ++Q + + F GK L ++N DE
Sbjct: 319 EPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAA 377
Query: 62 XXXXILSGEGN---EKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 118
I S K +D M V P ++ P+ K +
Sbjct: 378 FICAIHSPTLRVRPFKFEDIHPYSVSYSWDKQVEDEDHMEVF-PAGSSFPSTKLITLNRT 436
Query: 119 SDNQPGVLIQVYEGERTRTRDNN--LLGKFELSGI--PPAPRGVPQINVCFDIDANGILN 174
D + + T+ N + +E++G+ P VP + + D +G+
Sbjct: 437 GDFS----MAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVP-VKLKLRCDPSGLHT 491
Query: 175 V----------SAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVE 224
+ + D T +K+ +TI L +++ +++++ + A+D + +
Sbjct: 492 IEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETED 551
Query: 225 AKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWL 268
KN LE Y Y +R + +E+ + A+K K++ + +A +WL
Sbjct: 552 RKNTLEEYIYTLRGKL-EEEYAPFASDAEKTKLQGMLNKAEEWL 594
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 675
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 115/285 (40%), Gaps = 27/285 (9%)
Query: 2 EPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXX 61
EPV K L AK+ V V ++GG+TRIP ++Q + + F GK L ++N DE
Sbjct: 319 EPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAA 377
Query: 62 XXXXILSGEGN------EKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVF 115
I S E + E V P ++ P+ K
Sbjct: 378 FICAIHSPTLRVRPFKFEDIHPYSVSYSWDKQVEDEDHXEVF----PAGSSFPSTKLITL 433
Query: 116 STYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGI--PPAPRGVPQINVCFDIDANGIL 173
+ D T + + +E++G+ P VP + + D +G+
Sbjct: 434 NRTGDFSXAASYTDITQLPPNTPEQ--IANWEITGVQLPEGQDSVP-VKLKLRCDPSGLH 490
Query: 174 NV----------SAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKV 223
+ + D T +K+ +TI L +++ +++++ + A+D +
Sbjct: 491 TIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEXLAQDKLVAETE 550
Query: 224 EAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWL 268
+ KN LE Y Y +R + +E+ + A+K K++ + +A +WL
Sbjct: 551 DRKNTLEEYIYTLRGKL-EEEYAPFASDAEKTKLQGXLNKAEEWL 594
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 668
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 EPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDE 54
EPV K L AK+ V V ++GG+TRIP ++Q + + F GK L ++N DE
Sbjct: 321 EPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDE 372
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 188 ITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISA 247
+TI L +++ +++++ + A+D + + KN LE Y Y +R + +E+ +
Sbjct: 535 LTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKL-EEEYAP 593
Query: 248 KLPTADKKKIEDAIEEAIQWL 268
A+K K++ + +A +WL
Sbjct: 594 FASDAEKTKLQGMLNKAEEWL 614
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
pdb|2QXL|B Chain B, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
Length = 658
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 2 EPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDE 54
EPV K L AK+ V V ++GG+TRIP ++Q + + F GK L ++N DE
Sbjct: 318 EPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDE 369
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 188 ITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISA 247
+TI L +++ +++++ + A+D + + KN LE Y Y +R + +E+ +
Sbjct: 532 LTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKL-EEEYAP 590
Query: 248 KLPTADKKKIEDAIEEAIQWL 268
A+K K++ + +A +WL
Sbjct: 591 FASDAEKTKLQGMLNKAEEWL 611
>pdb|3LRA|A Chain A, Structural Basis For Assembling A Human Tripartite Complex
Dlg1-Mpp7- Mals3
Length = 254
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 243 EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGG 302
E+ +KL + +++ +IE I N + ++ E+ + NP + ++QG G
Sbjct: 15 EEYRSKLSQTEDRQLRSSIERVINIFQSNLFQALIDIQE-FYEVTLLDNPKLEVLFQGPG 73
Query: 303 ADAG 306
+D G
Sbjct: 74 SDTG 77
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.309 0.131 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,768,513
Number of Sequences: 62578
Number of extensions: 350993
Number of successful extensions: 1023
Number of sequences better than 100.0: 101
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 917
Number of HSP's gapped (non-prelim): 111
length of query: 330
length of database: 14,973,337
effective HSP length: 99
effective length of query: 231
effective length of database: 8,778,115
effective search space: 2027744565
effective search space used: 2027744565
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 52 (24.6 bits)