Query 020169
Match_columns 330
No_of_seqs 179 out of 329
Neff 5.0
Searched_HMMs 46136
Date Fri Mar 29 07:35:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020169.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020169hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4287 Pectin acetylesterase 100.0 5.2E-84 1.1E-88 621.9 7.4 266 45-310 36-316 (402)
2 PF03283 PAE: Pectinacetyleste 100.0 6.5E-80 1.4E-84 604.1 21.7 266 43-309 12-305 (361)
3 KOG1515 Arylacetamide deacetyl 95.9 0.033 7.1E-07 55.3 8.5 71 160-231 142-213 (336)
4 PRK10162 acetyl esterase; Prov 93.9 0.095 2E-06 50.6 5.3 44 165-208 132-178 (318)
5 PF00326 Peptidase_S9: Prolyl 93.6 0.062 1.3E-06 47.8 3.2 91 135-231 14-105 (213)
6 PF10340 DUF2424: Protein of u 92.2 1.3 2.8E-05 44.8 10.6 109 69-207 107-218 (374)
7 PRK10566 esterase; Provisional 90.9 0.54 1.2E-05 42.3 5.8 53 168-224 91-143 (249)
8 PF00135 COesterase: Carboxyle 89.7 0.93 2E-05 45.4 6.9 80 164-250 185-269 (535)
9 PF07859 Abhydrolase_3: alpha/ 89.4 0.65 1.4E-05 40.8 5.0 41 167-208 51-95 (211)
10 PF01764 Lipase_3: Lipase (cla 86.2 2.8 6E-05 34.6 6.6 40 183-222 63-103 (140)
11 PF12695 Abhydrolase_5: Alpha/ 85.4 1.1 2.4E-05 36.3 3.8 40 163-203 41-80 (145)
12 PLN02408 phospholipase A1 84.5 4.3 9.3E-05 41.0 8.1 64 172-242 188-252 (365)
13 cd00312 Esterase_lipase Estera 84.2 1.5 3.2E-05 44.3 4.8 40 164-203 153-195 (493)
14 TIGR01840 esterase_phb esteras 83.9 1.5 3.3E-05 39.3 4.3 37 166-202 77-113 (212)
15 COG0657 Aes Esterase/lipase [L 82.7 2.7 5.9E-05 39.8 5.8 41 168-208 133-176 (312)
16 PRK10115 protease 2; Provision 82.7 0.93 2E-05 48.8 2.8 35 165-199 505-539 (686)
17 COG2939 Carboxypeptidase C (ca 80.7 16 0.00035 38.4 10.9 140 69-222 88-240 (498)
18 PLN02802 triacylglycerol lipas 80.7 5.7 0.00012 41.8 7.5 52 184-241 330-381 (509)
19 PLN02454 triacylglycerol lipas 79.9 9.7 0.00021 39.2 8.8 65 171-242 215-282 (414)
20 cd00707 Pancreat_lipase_like P 79.6 4.8 0.0001 38.3 6.2 58 167-227 95-152 (275)
21 PF00756 Esterase: Putative es 78.2 2 4.3E-05 38.9 3.0 49 167-219 98-147 (251)
22 cd00519 Lipase_3 Lipase (class 75.6 8.8 0.00019 34.8 6.5 39 183-222 127-165 (229)
23 PF05677 DUF818: Chlamydia CHL 75.5 5.5 0.00012 40.2 5.5 53 168-223 198-254 (365)
24 PF12242 Eno-Rase_NADH_b: NAD( 74.3 4.6 0.0001 32.4 3.7 45 165-214 20-66 (78)
25 TIGR02821 fghA_ester_D S-formy 73.5 4.3 9.2E-05 38.1 4.0 23 182-204 136-158 (275)
26 cd07224 Pat_like Patatin-like 71.0 4.8 0.0001 37.5 3.7 32 171-203 17-48 (233)
27 PRK10439 enterobactin/ferric e 70.8 5.8 0.00013 40.3 4.5 39 166-204 264-308 (411)
28 PF10503 Esterase_phd: Esteras 70.7 5.8 0.00013 37.1 4.2 41 167-211 80-120 (220)
29 cd00741 Lipase Lipase. Lipase 70.4 11 0.00024 32.0 5.5 28 182-209 26-53 (153)
30 cd07198 Patatin Patatin-like p 69.0 5.8 0.00013 34.7 3.6 31 170-203 15-45 (172)
31 PF02230 Abhydrolase_2: Phosph 68.1 9.3 0.0002 34.3 4.8 35 167-202 89-123 (216)
32 PRK13604 luxD acyl transferase 66.8 12 0.00026 36.9 5.7 51 164-224 91-141 (307)
33 PF00450 Peptidase_S10: Serine 66.3 43 0.00093 32.6 9.4 128 79-219 38-175 (415)
34 PF03583 LIP: Secretory lipase 66.2 12 0.00026 36.0 5.4 48 179-227 66-115 (290)
35 PF07819 PGAP1: PGAP1-like pro 66.2 26 0.00057 32.5 7.5 34 167-200 65-101 (225)
36 PF00975 Thioesterase: Thioest 65.9 19 0.00042 31.8 6.4 53 166-221 50-102 (229)
37 KOG1282 Serine carboxypeptidas 65.9 32 0.00069 35.8 8.7 142 65-220 56-208 (454)
38 cd07222 Pat_PNPLA4 Patatin-lik 64.4 7.1 0.00015 36.7 3.4 32 171-202 17-49 (246)
39 PF08840 BAAT_C: BAAT / Acyl-C 64.4 15 0.00033 33.6 5.5 56 167-226 5-60 (213)
40 PF05728 UPF0227: Uncharacteri 62.9 16 0.00034 33.3 5.3 37 168-210 45-81 (187)
41 COG1770 PtrB Protease II [Amin 62.9 7.5 0.00016 42.1 3.6 37 165-201 508-546 (682)
42 PLN02442 S-formylglutathione h 62.3 7.9 0.00017 36.7 3.4 22 182-203 141-162 (283)
43 TIGR03100 hydr1_PEP hydrolase, 62.0 12 0.00027 35.0 4.6 36 166-202 83-118 (274)
44 COG1506 DAP2 Dipeptidyl aminop 61.9 7.5 0.00016 41.3 3.4 36 166-201 455-490 (620)
45 cd07218 Pat_iPLA2 Calcium-inde 61.7 9.6 0.00021 36.1 3.8 31 171-202 18-48 (245)
46 cd07204 Pat_PNPLA_like Patatin 61.3 9.5 0.0002 35.8 3.6 32 171-202 17-49 (243)
47 PLN03037 lipase class 3 family 60.6 24 0.00052 37.4 6.8 55 182-242 316-370 (525)
48 KOG1209 1-Acyl dihydroxyaceton 60.5 9.5 0.00021 36.7 3.5 65 180-244 4-75 (289)
49 KOG4627 Kynurenine formamidase 60.4 9.2 0.0002 36.6 3.3 32 172-204 125-156 (270)
50 COG3509 LpqC Poly(3-hydroxybut 60.1 22 0.00048 35.3 6.0 33 168-200 128-160 (312)
51 TIGR03712 acc_sec_asp2 accesso 58.2 4.9 0.00011 42.2 1.3 27 179-206 353-379 (511)
52 COG2272 PnbA Carboxylesterase 58.2 12 0.00025 39.4 3.9 37 163-199 156-195 (491)
53 PLN02298 hydrolase, alpha/beta 58.1 27 0.00058 33.1 6.2 36 166-201 116-151 (330)
54 PF12697 Abhydrolase_6: Alpha/ 56.0 41 0.0009 27.9 6.4 37 184-224 66-102 (228)
55 PF06028 DUF915: Alpha/beta hy 54.1 25 0.00055 33.6 5.3 61 163-227 84-146 (255)
56 TIGR03101 hydr2_PEP hydrolase, 53.9 26 0.00056 33.6 5.3 58 168-239 86-143 (266)
57 PLN00021 chlorophyllase 53.3 21 0.00046 34.8 4.7 39 168-206 102-148 (313)
58 PRK11460 putative hydrolase; P 52.0 23 0.00049 32.6 4.5 33 168-200 87-119 (232)
59 cd07205 Pat_PNPLA6_PNPLA7_NTE1 51.9 38 0.00082 29.4 5.7 32 168-202 15-46 (175)
60 KOG1516 Carboxylesterase and r 51.4 20 0.00044 36.8 4.5 34 168-201 176-212 (545)
61 TIGR03695 menH_SHCHC 2-succiny 50.4 36 0.00077 28.8 5.2 31 172-204 60-90 (251)
62 PLN02324 triacylglycerol lipas 49.8 50 0.0011 34.1 6.9 38 170-208 201-239 (415)
63 PF01738 DLH: Dienelactone hyd 49.1 22 0.00048 31.7 3.8 37 166-202 80-116 (218)
64 PLN02310 triacylglycerol lipas 49.1 49 0.0011 34.0 6.7 52 183-241 208-259 (405)
65 KOG1553 Predicted alpha/beta h 49.0 33 0.00072 35.2 5.3 80 157-245 284-364 (517)
66 COG4814 Uncharacterized protei 48.9 20 0.00044 35.0 3.7 45 165-211 119-165 (288)
67 KOG2237 Predicted serine prote 48.5 16 0.00034 39.8 3.2 33 165-197 530-562 (712)
68 cd07207 Pat_ExoU_VipD_like Exo 48.4 22 0.00048 31.2 3.7 31 169-202 15-45 (194)
69 PF12740 Chlorophyllase2: Chlo 48.0 22 0.00048 34.4 3.8 40 166-206 65-113 (259)
70 PRK10673 acyl-CoA esterase; Pr 48.0 33 0.00072 30.4 4.8 36 183-222 80-115 (255)
71 PRK10349 carboxylesterase BioH 48.0 45 0.00099 29.9 5.7 49 169-224 62-110 (256)
72 PLN02965 Probable pheophorbida 47.7 46 0.001 30.2 5.8 38 180-221 68-105 (255)
73 COG0412 Dienelactone hydrolase 47.1 30 0.00065 32.3 4.5 42 165-206 93-134 (236)
74 TIGR01738 bioH putative pimelo 47.1 40 0.00086 28.7 5.0 51 168-225 52-102 (245)
75 PLN02211 methyl indole-3-aceta 46.9 48 0.001 31.0 5.9 24 180-203 83-106 (273)
76 PF08237 PE-PPE: PE-PPE domain 46.7 59 0.0013 30.4 6.4 55 163-221 31-88 (225)
77 TIGR03056 bchO_mg_che_rel puta 45.9 56 0.0012 29.0 6.0 35 183-221 94-128 (278)
78 KOG1552 Predicted alpha/beta h 45.6 33 0.00072 33.2 4.6 41 165-210 112-152 (258)
79 TIGR03230 lipo_lipase lipoprot 45.6 46 0.001 34.5 5.9 56 167-227 102-159 (442)
80 PRK05077 frsA fermentation/res 45.4 42 0.00091 33.9 5.5 35 166-200 247-281 (414)
81 KOG4569 Predicted lipase [Lipi 45.2 53 0.0011 32.5 6.1 83 167-257 156-246 (336)
82 KOG3724 Negative regulator of 44.3 56 0.0012 36.7 6.5 67 180-252 178-247 (973)
83 PRK00870 haloalkane dehalogena 44.1 90 0.0019 29.0 7.2 37 183-223 114-150 (302)
84 PLN03016 sinapoylglucose-malat 43.0 98 0.0021 31.8 7.8 132 66-207 50-188 (433)
85 cd07230 Pat_TGL4-5_like Triacy 42.8 29 0.00062 35.6 3.9 30 170-202 90-119 (421)
86 cd07220 Pat_PNPLA2 Patatin-lik 42.6 28 0.00061 33.1 3.6 30 171-200 22-52 (249)
87 PTZ00472 serine carboxypeptida 41.5 2.5E+02 0.0055 29.0 10.6 116 79-208 75-195 (462)
88 PLN00413 triacylglycerol lipas 41.4 41 0.00088 35.4 4.8 36 170-207 272-307 (479)
89 TIGR02240 PHA_depoly_arom poly 40.6 47 0.001 30.4 4.7 36 183-222 90-125 (276)
90 PLN02894 hydrolase, alpha/beta 40.6 62 0.0014 32.4 5.9 40 183-226 175-215 (402)
91 PRK15231 fimbrial adhesin prot 40.4 40 0.00086 30.2 3.9 62 65-134 78-139 (150)
92 TIGR00976 /NonD putative hydro 40.2 39 0.00084 35.2 4.5 36 166-202 80-115 (550)
93 PF01734 Patatin: Patatin-like 39.6 22 0.00049 29.5 2.2 18 185-202 28-45 (204)
94 PF03575 Peptidase_S51: Peptid 39.2 32 0.00069 29.7 3.1 11 186-196 70-80 (154)
95 PLN02571 triacylglycerol lipas 38.8 61 0.0013 33.5 5.5 39 169-208 208-250 (413)
96 PLN02719 triacylglycerol lipas 38.5 57 0.0012 34.6 5.4 26 183-208 297-322 (518)
97 cd07210 Pat_hypo_W_succinogene 38.5 38 0.00083 31.3 3.7 30 170-202 17-46 (221)
98 PLN02847 triacylglycerol lipas 38.2 71 0.0015 34.7 6.1 24 184-207 251-274 (633)
99 PLN02209 serine carboxypeptida 37.5 2.3E+02 0.0051 29.2 9.6 132 66-208 52-191 (437)
100 COG1752 RssA Predicted esteras 37.5 36 0.00077 32.8 3.5 30 171-203 29-58 (306)
101 cd07228 Pat_NTE_like_bacteria 37.5 46 0.001 29.1 4.0 29 170-201 17-45 (175)
102 TIGR03739 PRTRC_D PRTRC system 37.3 59 0.0013 31.5 5.0 34 181-220 272-305 (320)
103 COG1075 LipA Predicted acetylt 37.0 93 0.002 30.6 6.4 60 137-210 90-149 (336)
104 PLN02733 phosphatidylcholine-s 36.3 62 0.0013 33.4 5.2 34 167-202 147-180 (440)
105 TIGR03611 RutD pyrimidine util 36.2 67 0.0015 27.7 4.8 21 183-203 79-99 (257)
106 PLN02753 triacylglycerol lipas 36.1 65 0.0014 34.4 5.3 53 183-241 311-369 (531)
107 PLN02824 hydrolase, alpha/beta 36.0 97 0.0021 28.6 6.1 34 184-221 102-135 (294)
108 PLN02934 triacylglycerol lipas 35.7 62 0.0013 34.4 5.1 39 167-207 306-344 (515)
109 KOG3101 Esterase D [General fu 35.6 15 0.00033 35.2 0.6 54 145-201 100-158 (283)
110 PF05057 DUF676: Putative seri 33.7 37 0.0008 31.0 2.8 47 159-206 54-100 (217)
111 cd07209 Pat_hypo_Ecoli_Z1214_l 33.6 48 0.001 30.2 3.6 28 171-201 16-43 (215)
112 PLN02162 triacylglycerol lipas 33.5 70 0.0015 33.7 5.0 124 81-208 163-302 (475)
113 cd07225 Pat_PNPLA6_PNPLA7 Pata 33.0 48 0.001 32.4 3.6 31 170-203 32-62 (306)
114 PRK10985 putative hydrolase; P 33.0 1.7E+02 0.0036 28.0 7.3 33 166-200 115-147 (324)
115 PF00151 Lipase: Lipase; Inte 32.9 79 0.0017 31.3 5.2 82 134-229 103-194 (331)
116 PRK13917 plasmid segregation p 32.1 1.1E+02 0.0024 30.2 6.1 27 180-211 289-315 (344)
117 cd07208 Pat_hypo_Ecoli_yjju_li 31.6 54 0.0012 30.6 3.6 31 169-201 14-44 (266)
118 PF00091 Tubulin: Tubulin/FtsZ 31.5 1.3E+02 0.0029 27.3 6.1 49 164-212 103-156 (216)
119 PRK04940 hypothetical protein; 31.2 68 0.0015 29.4 4.1 23 184-210 60-82 (180)
120 PRK10279 hypothetical protein; 30.8 55 0.0012 32.0 3.6 29 171-202 23-51 (300)
121 PF06500 DUF1100: Alpha/beta h 30.7 55 0.0012 33.8 3.7 34 166-199 243-276 (411)
122 cd07206 Pat_TGL3-4-5_SDP1 Tria 30.7 61 0.0013 32.0 3.9 29 171-202 87-115 (298)
123 TIGR03343 biphenyl_bphD 2-hydr 30.2 1.1E+02 0.0024 27.5 5.4 23 182-204 99-121 (282)
124 PRK10749 lysophospholipase L2; 30.0 1.4E+02 0.0031 28.5 6.3 21 183-203 130-150 (330)
125 cd01819 Patatin_and_cPLA2 Pata 29.7 72 0.0016 27.6 3.8 33 169-202 14-46 (155)
126 KOG2564 Predicted acetyltransf 28.9 74 0.0016 31.8 4.1 38 169-211 134-171 (343)
127 PF00561 Abhydrolase_1: alpha/ 28.8 81 0.0018 26.9 4.0 37 166-204 28-64 (230)
128 cd07231 Pat_SDP1-like Sugar-De 28.7 69 0.0015 32.0 3.9 30 171-203 86-115 (323)
129 PF06821 Ser_hydrolase: Serine 28.4 1.3E+02 0.0027 26.8 5.2 35 166-203 40-74 (171)
130 PF09752 DUF2048: Uncharacteri 28.4 1E+02 0.0022 31.2 5.0 36 169-211 163-198 (348)
131 TIGR01836 PHA_synth_III_C poly 27.9 73 0.0016 30.8 3.9 34 167-202 121-154 (350)
132 TIGR01392 homoserO_Ac_trn homo 27.6 1.5E+02 0.0032 28.6 6.0 37 184-224 126-163 (351)
133 cd07221 Pat_PNPLA3 Patatin-lik 27.5 68 0.0015 30.5 3.5 32 171-202 18-50 (252)
134 TIGR02427 protocat_pcaD 3-oxoa 27.4 1.1E+02 0.0025 25.9 4.7 21 183-203 78-98 (251)
135 PLN02578 hydrolase 26.6 2.4E+02 0.0053 27.2 7.3 39 183-225 151-190 (354)
136 TIGR01250 pro_imino_pep_2 prol 26.1 1.5E+02 0.0032 25.9 5.3 20 183-202 95-114 (288)
137 PF04260 DUF436: Protein of un 26.0 75 0.0016 29.1 3.3 26 168-193 3-28 (172)
138 cd07227 Pat_Fungal_NTE1 Fungal 25.9 77 0.0017 30.5 3.6 30 171-203 28-57 (269)
139 PRK11071 esterase YqiA; Provis 25.7 1.4E+02 0.003 26.6 5.0 34 167-202 46-79 (190)
140 PF07172 GRP: Glycine rich pro 25.3 40 0.00087 27.8 1.3 15 2-16 4-18 (95)
141 PLN02761 lipase class 3 family 25.2 1.4E+02 0.003 31.9 5.6 54 183-242 293-353 (527)
142 CHL00024 psbI photosystem II p 25.2 40 0.00087 23.3 1.1 12 120-131 21-32 (36)
143 PRK02655 psbI photosystem II r 25.1 41 0.00088 23.5 1.1 13 120-132 21-33 (38)
144 cd07232 Pat_PLPL Patain-like p 24.9 79 0.0017 32.3 3.7 31 170-203 84-114 (407)
145 cd07229 Pat_TGL3_like Triacylg 24.2 88 0.0019 32.0 3.8 30 171-203 101-130 (391)
146 COG4947 Uncharacterized protei 24.1 48 0.001 31.0 1.8 14 185-198 102-115 (227)
147 cd07386 MPP_DNA_pol_II_small_a 24.1 2.3E+02 0.0049 26.1 6.3 42 146-195 5-48 (243)
148 PRK03592 haloalkane dehalogena 23.8 2.4E+02 0.0052 25.9 6.4 34 184-221 93-126 (295)
149 KOG4409 Predicted hydrolase/ac 23.2 1.7E+02 0.0036 29.9 5.5 54 168-228 147-200 (365)
150 PF01083 Cutinase: Cutinase; 23.2 1.6E+02 0.0035 26.2 5.0 40 163-204 62-101 (179)
151 PRK03204 haloalkane dehalogena 23.2 1.8E+02 0.0039 27.2 5.5 50 167-222 86-135 (286)
152 PF11187 DUF2974: Protein of u 23.2 2E+02 0.0043 26.9 5.8 37 168-207 71-107 (224)
153 PLN02872 triacylglycerol lipas 23.1 1E+02 0.0022 31.2 4.0 34 163-199 142-175 (395)
154 KOG4391 Predicted alpha/beta h 23.0 73 0.0016 30.9 2.8 68 135-208 106-173 (300)
155 PLN02385 hydrolase; alpha/beta 23.0 1.3E+02 0.0027 29.0 4.5 17 184-200 162-178 (349)
156 PF11288 DUF3089: Protein of u 22.9 1.2E+02 0.0026 28.4 4.1 66 133-199 42-110 (207)
157 cd07213 Pat17_PNPLA8_PNPLA9_li 22.8 1.3E+02 0.0028 28.7 4.5 34 167-201 16-51 (288)
158 COG5294 Uncharacterized protei 22.7 2.8E+02 0.0062 23.8 6.0 29 58-87 43-73 (113)
159 PRK06489 hypothetical protein; 22.3 1.9E+02 0.004 28.1 5.6 34 167-202 138-172 (360)
160 PF04631 Baculo_44: Baculoviru 22.2 49 0.0011 33.6 1.5 50 59-113 94-149 (371)
161 COG5023 Tubulin [Cytoskeleton] 22.2 1.6E+02 0.0034 30.5 5.1 53 160-212 105-162 (443)
162 cd07390 MPP_AQ1575 Aquifex aeo 21.8 70 0.0015 27.8 2.3 51 143-194 2-54 (168)
163 KOG1454 Predicted hydrolase/ac 21.7 2.4E+02 0.0052 27.7 6.2 50 164-220 111-160 (326)
164 PRK08775 homoserine O-acetyltr 21.7 1.4E+02 0.003 28.7 4.5 35 184-222 138-172 (343)
165 PF02450 LCAT: Lecithin:choles 21.6 1.3E+02 0.0027 30.3 4.4 37 166-205 104-140 (389)
166 smart00087 PTH Parathyroid hor 21.5 99 0.0022 21.4 2.4 22 293-314 7-28 (36)
167 COG0031 CysK Cysteine synthase 21.3 1.2E+02 0.0025 30.2 3.9 57 159-223 238-295 (300)
168 KOG2183 Prolylcarboxypeptidase 21.3 1.2E+02 0.0025 31.9 4.0 84 118-211 98-190 (492)
169 cd07387 MPP_PolD2_C PolD2 (DNA 21.2 2.6E+02 0.0057 26.9 6.2 32 166-197 18-57 (257)
170 PF08538 DUF1749: Protein of u 21.1 1.5E+02 0.0032 29.4 4.6 67 135-207 63-131 (303)
171 PRK13690 hypothetical protein; 20.5 1.3E+02 0.0029 27.8 3.8 28 166-193 8-35 (184)
172 PLN02511 hydrolase 20.5 1.4E+02 0.003 29.7 4.3 35 166-202 157-191 (388)
173 COG4099 Predicted peptidase [G 20.5 1.2E+02 0.0026 30.7 3.8 43 167-209 252-294 (387)
174 PF05448 AXE1: Acetyl xylan es 20.5 65 0.0014 31.7 2.0 43 157-201 147-192 (320)
175 PF02553 CbiN: Cobalt transpor 20.3 70 0.0015 25.4 1.8 16 1-16 1-16 (74)
No 1
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=5.2e-84 Score=621.88 Aligned_cols=266 Identities=66% Similarity=1.138 Sum_probs=255.8
Q ss_pred cccCeEEEecCCCCCCccCCCCCCceEEeccCCCCCCcEEEEeeccccccCchhhhcccCCCCCCchhhhccCCccccCC
Q 020169 45 LMVPLTLIQGADSKGAVCLDGTLPGYHIHRGSGSGANSWLIHLEGGGWCNTIRNCVYRKTTRRGSAKFMEKQLPFTGILS 124 (330)
Q Consensus 45 ~~~~ltll~~a~~~gA~ClDGSp~gyy~~~g~g~gs~kwlI~leGGG~C~d~~tC~~R~~t~lGSS~~~~~~~~~~GIls 124 (330)
+.|++|+|+.|.++||+|+|||+||||+.+|+|+|+++|||+|||||||.+..+|..|..|++|||++|++++.|+||||
T Consensus 36 ~~v~ltli~~A~akGAvClDGSlpgYhl~~g~GSg~n~wliqlegGgwC~~i~sCv~Rk~tr~GSS~~mek~~~FtGILS 115 (402)
T KOG4287|consen 36 LMVPLTLIRGAAAKGAVCLDGSLPGYHLHRGSGSGANNWLIQLEGGGWCNNIRSCVYRKMTRLGSSNYMEKELAFTGILS 115 (402)
T ss_pred ccchhHHHhhHhhcCceecCCCCcceeeccCCCccccceeEecccccccccchhHHHHhhccccccccchhhcceeEEec
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccEEEEecCCCCccCCCCCCCCc-eEEEehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhH
Q 020169 125 NKAEENPDFFNWNRVKLRYCDGASFSGDSQNEGA-QLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 125 ~~~~~NP~F~nwN~VfVpYCdGd~~~G~~~~~~~-~l~frG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d 203 (330)
+++++||||+|||+|+||||||++|+|+.++++. +++|||++||+|||++|+++||.+|+++||+||||||+|+++|||
T Consensus 116 ~k~~eNPdF~NWNrVkvRYCDGasFsGd~e~~~~t~l~fRG~rIw~av~~eLl~kGms~Ak~alLsGcSAGGLa~iLhCD 195 (402)
T KOG4287|consen 116 NKPSENPDFYNWNRVKVRYCDGASFSGDSENKNATQLQFRGARIWLAVMDELLAKGMSNAKQALLSGCSAGGLASILHCD 195 (402)
T ss_pred CCcccCCcccccceeEEeecCCCcccCcccccchhhhhhhHHHHHHHHHHHHHHhhhhHHHHHHhhcCCccchhheeehH
Confidence 9999999999999999999999999999886543 999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCceEEEecCcccccccCCCCchhhHHHHhhhhhhhhcccccCCcccccCCCCccccccccc--cccCCcce-
Q 020169 204 EFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAGVVSLQEVQKNLPITCTSQLDPTSVNIWLSL--AFLDPTYF- 280 (330)
Q Consensus 204 ~vr~~lp~~a~V~~l~DSG~Fld~~~~~g~~~i~~~~~~vv~l~~~~~~lp~~C~~~~~~w~CfFp~~l--~~~tP~f~- 280 (330)
++|++||++++|+||+|||||||.+|++|+++++.+|.++|++|+++++||+.|+++++||.|||||++ .++||+|+
T Consensus 196 ~Fr~~lp~~t~VKClSDaG~FLd~~dv~g~~t~~~~~~~vv~lqg~~k~Lp~~Ct~~~~p~~CfFpq~v~~~irtP~F~v 275 (402)
T KOG4287|consen 196 EFRELLPPTTKVKCLSDAGFFLDAKDVSGGPTLRSYYAGVVTLQGLQKNLPQSCTSHLEPSLCFFPQYVLKTIRTPVFLV 275 (402)
T ss_pred HHHhhCCCCceeEEecccceeeecccccCCcchhhhhhhheeeecccccCCHHHHhcCCchhhcchHHHHhhcCCceEeh
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 58999995
Q ss_pred eccccccccc-----------chhHHHHHHHhHhhhhhhHH
Q 020169 281 NSSYENVTLC-----------RGLDYIHSLLSFFSASSLKI 310 (330)
Q Consensus 281 ns~yD~v~~~-----------~~w~yi~~~~~~~~~~~~~~ 310 (330)
|++||.+|.+ +-|.|++..++--.++-++.
T Consensus 276 N~afD~wQi~~~laP~s~d~~g~w~~ckl~~~~c~~~q~~~ 316 (402)
T KOG4287|consen 276 NAAFDSWQIQNSLAPTSADPSGSWKYCKLNHRECTAAQIDF 316 (402)
T ss_pred hhhhhHHhccCCCCCCCCCcccchhhcccccccCCHHHHHH
Confidence 9999999864 45999999999888776654
No 2
>PF03283 PAE: Pectinacetylesterase
Probab=100.00 E-value=6.5e-80 Score=604.14 Aligned_cols=266 Identities=48% Similarity=0.834 Sum_probs=252.5
Q ss_pred CCcccCeEEEecCCCCCCccCCCCCCceEEeccCCCCCCcEEEEeeccccccCchhhhcccCCCCCCchhhhccCCcccc
Q 020169 43 EPLMVPLTLIQGADSKGAVCLDGTLPGYHIHRGSGSGANSWLIHLEGGGWCNTIRNCVYRKTTRRGSAKFMEKQLPFTGI 122 (330)
Q Consensus 43 ~~~~~~ltll~~a~~~gA~ClDGSp~gyy~~~g~g~gs~kwlI~leGGG~C~d~~tC~~R~~t~lGSS~~~~~~~~~~GI 122 (330)
+.+.++||+|++|.+++|+|+||||++||+|+|+|++++||||||||||||||.++|..|..|.+|||+.|++++.+.||
T Consensus 12 ~~~~~~l~~l~~~~~~~a~C~DGS~~~yy~~~g~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gi 91 (361)
T PF03283_consen 12 QSDEVKLTLLDDAVDTGAVCLDGSPPGYYFRPGSGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGI 91 (361)
T ss_pred cccccceEEecCCCCCCCCcCCCCCCcEEEccCCCCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhcccccc
Confidence 45699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccEEEEecCCCCccCCCCC---CCCceEEEehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHH
Q 020169 123 LSNKAEENPDFFNWNRVKLRYCDGASFSGDSQ---NEGAQLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASI 199 (330)
Q Consensus 123 ls~~~~~NP~F~nwN~VfVpYCdGd~~~G~~~---~~~~~l~frG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~ 199 (330)
|++++++||+|+|||+|||||||||+|+|+++ +++.++||||++|++|||++|+++|+++|++|||+||||||+||+
T Consensus 92 ls~~~~~Np~f~~wN~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~ 171 (361)
T PF03283_consen 92 LSNDPAENPDFYNWNHVFVPYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAI 171 (361)
T ss_pred ccCCcccCCccccccEEEEEecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcccceEEEeccChHHHHHH
Confidence 99999999999999999999999999999876 567899999999999999999998999999999999999999999
Q ss_pred HhhHHHHhhCCCCceEEEecCcccccccCCCCchhhHHHHhhhhhhhhcccccCCcccccCCCCccccccccc--cccCC
Q 020169 200 LHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAGVVSLQEVQKNLPITCTSQLDPTSVNIWLSL--AFLDP 277 (330)
Q Consensus 200 l~~d~vr~~lp~~a~V~~l~DSG~Fld~~~~~g~~~i~~~~~~vv~l~~~~~~lp~~C~~~~~~w~CfFp~~l--~~~tP 277 (330)
+|+|+||++||+.++|++++|||||+|.++++|.+.++.+++.++++|++.+++|++|++++++. |||||++ +|+||
T Consensus 172 ~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~~~~~~-C~f~q~~~~~I~tP 250 (361)
T PF03283_consen 172 LHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNWSKSLPESCVAQYDPE-CFFPQYLYPYIKTP 250 (361)
T ss_pred HHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHhhccCCHhHHhccCcc-ccchHHHHhhcCcc
Confidence 99999999999889999999999999999999999999999999999999999999999988777 9999998 69999
Q ss_pred cce-eccccccccc----------------------chhHHHHHHHhHhhhhhhH
Q 020169 278 TYF-NSSYENVTLC----------------------RGLDYIHSLLSFFSASSLK 309 (330)
Q Consensus 278 ~f~-ns~yD~v~~~----------------------~~w~yi~~~~~~~~~~~~~ 309 (330)
+|| ||+||.+|+. .||+|||++++.|.+.--.
T Consensus 251 lFivns~YD~wQl~~il~p~~~~w~~c~~~~~~Cs~~Ql~~lq~fr~~~~~aL~~ 305 (361)
T PF03283_consen 251 LFIVNSLYDSWQLQNILVPPSGSWISCKNDLPPCSPSQLDYLQGFRSEMLDALKN 305 (361)
T ss_pred eeeehhhhCHHHhhcccCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 994 9999998842 4799999999999876433
No 3
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=95.92 E-value=0.033 Score=55.26 Aligned_cols=71 Identities=18% Similarity=0.138 Sum_probs=43.6
Q ss_pred EEEehHHHHHHHHHH-HHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccccccCCCC
Q 020169 160 LYFRGQRIWLTAMQD-LMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVS 231 (330)
Q Consensus 160 l~frG~~n~~Avl~~-L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~Fld~~~~~ 231 (330)
-|.-|-.-++-+++. ++. --.++++|+|+|.||||--|..=+.++++-=+...++++..=--.|+...+..
T Consensus 142 ~y~D~~~Al~w~~~~~~~~-~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~ 213 (336)
T KOG1515|consen 142 AYDDGWAALKWVLKNSWLK-LGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRT 213 (336)
T ss_pred cchHHHHHHHHHHHhHHHH-hCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCC
Confidence 344455555666663 222 24678889999999999988888888886421223444444334555555443
No 4
>PRK10162 acetyl esterase; Provisional
Probab=93.89 E-value=0.095 Score=50.56 Aligned_cols=44 Identities=16% Similarity=0.109 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHh--CCC-CcCeEEEeeeChhhHHHHHhhHHHHhh
Q 020169 165 QRIWLTAMQDLMAK--GMQ-NADQALLSGCSAGGLASILHCDEFRDL 208 (330)
Q Consensus 165 ~~n~~Avl~~L~~~--gl~-~a~~VlLsG~SAGGlga~l~~d~vr~~ 208 (330)
..-..++++|+.++ .++ ++++|+|.|.||||.-|+.-+-.+++.
T Consensus 132 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~ 178 (318)
T PRK10162 132 IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDK 178 (318)
T ss_pred HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhc
Confidence 35567788888652 243 578999999999999988877777654
No 5
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=93.60 E-value=0.062 Score=47.83 Aligned_cols=91 Identities=16% Similarity=0.210 Sum_probs=49.7
Q ss_pred cccEEEEecCCCCccCCCCCC-CCceEEEehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCc
Q 020169 135 NWNRVKLRYCDGASFSGDSQN-EGAQLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTT 213 (330)
Q Consensus 135 nwN~VfVpYCdGd~~~G~~~~-~~~~l~frG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a 213 (330)
+++++.+.|--+..+-.+-.. ....+--....-+.+++++|.+++.-++++|.+.|.|+||+.|.+-+- ..|...
T Consensus 14 Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~----~~~~~f 89 (213)
T PF00326_consen 14 GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT----QHPDRF 89 (213)
T ss_dssp T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH----HTCCGS
T ss_pred CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc----ccceee
Confidence 566777777655522110000 000010111334667789998877779999999999999999886544 344322
Q ss_pred eEEEecCcccccccCCCC
Q 020169 214 KVKCLSDAGMFLDAVDVS 231 (330)
Q Consensus 214 ~V~~l~DSG~Fld~~~~~ 231 (330)
+ .+++.+|+ .|.....
T Consensus 90 ~-a~v~~~g~-~d~~~~~ 105 (213)
T PF00326_consen 90 K-AAVAGAGV-SDLFSYY 105 (213)
T ss_dssp S-EEEEESE--SSTTCSB
T ss_pred e-eeecccee-cchhccc
Confidence 1 23445553 4554443
No 6
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=92.25 E-value=1.3 Score=44.85 Aligned_cols=109 Identities=19% Similarity=0.246 Sum_probs=62.2
Q ss_pred ceEEecc-C--CCCCCcEEEEeeccccccCchhhhcccCCCCCCchhhhccCCccccCCCCCCCCCCcccccEEEEecCC
Q 020169 69 GYHIHRG-S--GSGANSWLIHLEGGGWCNTIRNCVYRKTTRRGSAKFMEKQLPFTGILSNKAEENPDFFNWNRVKLRYCD 145 (330)
Q Consensus 69 gyy~~~g-~--g~gs~kwlI~leGGG~C~d~~tC~~R~~t~lGSS~~~~~~~~~~GIls~~~~~NP~F~nwN~VfVpYCd 145 (330)
+|++.+. . ...++..|||+=|||++-....+.-.... .+ .-.+. +-.++.+-|=-
T Consensus 107 s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~------~i------~~~l~----------~~SILvLDYsL 164 (374)
T PF10340_consen 107 SYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLL------NI------YKLLP----------EVSILVLDYSL 164 (374)
T ss_pred eEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHH------HH------HHHcC----------CCeEEEEeccc
Confidence 4777763 2 23468999999999999876554432110 01 01111 01666666632
Q ss_pred CCccCCCCCCCCceEEEehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHh
Q 020169 146 GASFSGDSQNEGAQLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRD 207 (330)
Q Consensus 146 Gd~~~G~~~~~~~~l~frG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~ 207 (330)
-.+=..+...| .++ .=+-++.++|.+. ...++|+|.|.||||--++--..++++
T Consensus 165 t~~~~~~~~yP-tQL-----~qlv~~Y~~Lv~~--~G~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 165 TSSDEHGHKYP-TQL-----RQLVATYDYLVES--EGNKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred cccccCCCcCc-hHH-----HHHHHHHHHHHhc--cCCCeEEEEecCccHHHHHHHHHHHhh
Confidence 11000111122 111 2344566778731 235789999999999998888888876
No 7
>PRK10566 esterase; Provisional
Probab=90.88 E-value=0.54 Score=42.33 Aligned_cols=53 Identities=23% Similarity=0.317 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccc
Q 020169 168 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMF 224 (330)
Q Consensus 168 ~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~F 224 (330)
+.++++++.+++.-+.++|.|.|.|+||.-++.-+ ...|.-..+..+..++++
T Consensus 91 ~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~----~~~~~~~~~~~~~~~~~~ 143 (249)
T PRK10566 91 FPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIM----ARHPWVKCVASLMGSGYF 143 (249)
T ss_pred HHHHHHHHHhcCCcCccceeEEeecccHHHHHHHH----HhCCCeeEEEEeeCcHHH
Confidence 45667787765556789999999999999988443 234431223334455554
No 8
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=89.66 E-value=0.93 Score=45.44 Aligned_cols=80 Identities=18% Similarity=0.126 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHHHh--CCC-CcCeEEEeeeChhhHHHHHhhHHH--HhhCCCCceEEEecCcccccccCCCCchhhHHH
Q 020169 164 GQRIWLTAMQDLMAK--GMQ-NADQALLSGCSAGGLASILHCDEF--RDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRN 238 (330)
Q Consensus 164 G~~n~~Avl~~L~~~--gl~-~a~~VlLsG~SAGGlga~l~~d~v--r~~lp~~a~V~~l~DSG~Fld~~~~~g~~~i~~ 238 (330)
|-.=.+++|+|+.++ .|+ ++++|.|.|.||||..+.+|.-.= +.++ =++|.-||-.+......... +.
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF-----~raI~~SGs~~~~~~~~~~~--~~ 257 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLF-----HRAILQSGSALSPWATSENP--EQ 257 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSB-----SEEEEES--TTSTTSSBSHH--HH
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccc-----cccccccccccccccccccc--ch
Confidence 556678899999874 555 899999999999999988876551 1222 24556666444333333222 34
Q ss_pred Hhhhhhhhhccc
Q 020169 239 MFAGVVSLQEVQ 250 (330)
Q Consensus 239 ~~~~vv~l~~~~ 250 (330)
.+..+.+.-++.
T Consensus 258 ~~~~la~~lgc~ 269 (535)
T PF00135_consen 258 QAQKLAKALGCD 269 (535)
T ss_dssp HHHHHHHHTTST
T ss_pred hhhhhhhhhccc
Confidence 455555554554
No 9
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=89.42 E-value=0.65 Score=40.80 Aligned_cols=41 Identities=27% Similarity=0.264 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHh----CCCCcCeEEEeeeChhhHHHHHhhHHHHhh
Q 020169 167 IWLTAMQDLMAK----GMQNADQALLSGCSAGGLASILHCDEFRDL 208 (330)
Q Consensus 167 n~~Avl~~L~~~----gl~~a~~VlLsG~SAGGlga~l~~d~vr~~ 208 (330)
=+.++++|++++ + -++++|+|.|.||||.=++.-+-..++.
T Consensus 51 D~~~a~~~l~~~~~~~~-~d~~~i~l~G~SAGg~la~~~~~~~~~~ 95 (211)
T PF07859_consen 51 DVKAAYRWLLKNADKLG-IDPERIVLIGDSAGGHLALSLALRARDR 95 (211)
T ss_dssp HHHHHHHHHHHTHHHHT-EEEEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred ccccceeeecccccccc-ccccceEEeecccccchhhhhhhhhhhh
Confidence 456677888763 2 3588999999999999888888877776
No 10
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=86.16 E-value=2.8 Score=34.56 Aligned_cols=40 Identities=23% Similarity=0.395 Sum_probs=25.8
Q ss_pred cCeEEEeeeChhhHHHHHhhHHHHhhCCC-CceEEEecCcc
Q 020169 183 ADQALLSGCSAGGLASILHCDEFRDLFPK-TTKVKCLSDAG 222 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d~vr~~lp~-~a~V~~l~DSG 222 (330)
..+|+++|+|-||-=|.+-+-++.+..+. ..++++++=+.
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~ 103 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGA 103 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCC
Confidence 37899999999997555555555554432 34566665433
No 11
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=85.41 E-value=1.1 Score=36.34 Aligned_cols=40 Identities=25% Similarity=0.360 Sum_probs=30.3
Q ss_pred ehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhH
Q 020169 163 RGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 163 rG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d 203 (330)
.+...++++++++.. ...++++++|.|.|+||..+..-..
T Consensus 41 ~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 41 DGADAVERVLADIRA-GYPDPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp HHSHHHHHHHHHHHH-HHCTCCEEEEEEETHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHh-hcCCCCcEEEEEEccCcHHHHHHhh
Confidence 445578888888754 2348999999999999987766444
No 12
>PLN02408 phospholipase A1
Probab=84.47 E-value=4.3 Score=41.01 Aligned_cols=64 Identities=17% Similarity=0.304 Sum_probs=41.7
Q ss_pred HHHHHHhCCCC-cCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccccccCCCCchhhHHHHhhh
Q 020169 172 MQDLMAKGMQN-ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAG 242 (330)
Q Consensus 172 l~~L~~~gl~~-a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~Fld~~~~~g~~~i~~~~~~ 242 (330)
++.|++ ..++ ...|+++|+|-||-=|.+.+.+++..++....|.++.=++ +--|+....++++.
T Consensus 188 I~~ll~-~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGs------PRVGN~~Fa~~~~~ 252 (365)
T PLN02408 188 IARLLQ-SYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGG------PRVGNRSFRRQLEK 252 (365)
T ss_pred HHHHHH-hcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCC------CCcccHHHHHHHHh
Confidence 444444 3343 3469999999999999999999998876433455555333 23455566665543
No 13
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=84.18 E-value=1.5 Score=44.34 Aligned_cols=40 Identities=23% Similarity=0.193 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHHHh--CC-CCcCeEEEeeeChhhHHHHHhhH
Q 020169 164 GQRIWLTAMQDLMAK--GM-QNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 164 G~~n~~Avl~~L~~~--gl-~~a~~VlLsG~SAGGlga~l~~d 203 (330)
|..-..++++|+.++ .+ .++++|.|.|.||||..+.++.-
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLL 195 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhh
Confidence 566788889998764 23 58999999999999988877654
No 14
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=83.94 E-value=1.5 Score=39.27 Aligned_cols=37 Identities=16% Similarity=0.184 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
.-++.+++++.++.--++++|+|.|.|+||..++.-+
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a 113 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLG 113 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHH
Confidence 4467788888764333667999999999999876543
No 15
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=82.72 E-value=2.7 Score=39.82 Aligned_cols=41 Identities=24% Similarity=0.238 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhC--CC-CcCeEEEeeeChhhHHHHHhhHHHHhh
Q 020169 168 WLTAMQDLMAKG--MQ-NADQALLSGCSAGGLASILHCDEFRDL 208 (330)
Q Consensus 168 ~~Avl~~L~~~g--l~-~a~~VlLsG~SAGGlga~l~~d~vr~~ 208 (330)
+.++++|+.++. ++ ++++|.|+|+||||.=+..-+...++.
T Consensus 133 ~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 133 AYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred HHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc
Confidence 567788887632 33 589999999999999999999999986
No 16
>PRK10115 protease 2; Provisional
Probab=82.70 E-value=0.93 Score=48.84 Aligned_cols=35 Identities=26% Similarity=0.256 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHH
Q 020169 165 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASI 199 (330)
Q Consensus 165 ~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~ 199 (330)
..=+.++.++|+++|+-++++|.+.|.||||+-+.
T Consensus 505 ~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~ 539 (686)
T PRK10115 505 FNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMG 539 (686)
T ss_pred HHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHH
Confidence 44577889999999999999999999999998654
No 17
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=80.72 E-value=16 Score=38.39 Aligned_cols=140 Identities=15% Similarity=0.158 Sum_probs=78.7
Q ss_pred ceEEeccC-CCCCCcEEEEeeccccccCchhhhcccCCCCCCchhhhccCCccccCCCCCCCCCCcc--cccEEEE--ec
Q 020169 69 GYHIHRGS-GSGANSWLIHLEGGGWCNTIRNCVYRKTTRRGSAKFMEKQLPFTGILSNKAEENPDFF--NWNRVKL--RY 143 (330)
Q Consensus 69 gyy~~~g~-g~gs~kwlI~leGGG~C~d~~tC~~R~~t~lGSS~~~~~~~~~~GIls~~~~~NP~F~--nwN~VfV--pY 143 (330)
.||...+. ..-++-+++.|.||=-|.+..==.. .+|-+ .+..+ . ++....||+=+ +.+.||| |-
T Consensus 88 ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~----elGP~-----rI~~~-~-~P~~~~NP~SW~~~adLvFiDqPv 156 (498)
T COG2939 88 FFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLG----ELGPK-----RIQSG-T-SPSYPDNPGSWLDFADLVFIDQPV 156 (498)
T ss_pred EEEEecCCCCCCCCceEEEecCCCChHhhhhhhh----hcCCe-----eeeCC-C-CCCCCCCccccccCCceEEEecCc
Confidence 45666553 2235789999999988876542111 12211 11111 1 33333689544 4679999 56
Q ss_pred CCCCccC-CCCCCCCceEEEeh---HHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhh---CCCCceEE
Q 020169 144 CDGASFS-GDSQNEGAQLYFRG---QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDL---FPKTTKVK 216 (330)
Q Consensus 144 CdGd~~~-G~~~~~~~~l~frG---~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~---lp~~a~V~ 216 (330)
=||-+.+ |+.. ....+=.| +...+-+++++-. -.....+.+|+|.|-||.=...-+..|.+. +...+.+.
T Consensus 157 GTGfS~a~~~e~--~~d~~~~~~D~~~~~~~f~~~fp~-~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nls 233 (498)
T COG2939 157 GTGFSRALGDEK--KKDFEGAGKDVYSFLRLFFDKFPH-YARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLS 233 (498)
T ss_pred ccCccccccccc--ccchhccchhHHHHHHHHHHHHHH-HhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEee
Confidence 6666665 3221 11111111 2345556666643 455667899999999998777777777774 33345555
Q ss_pred EecC-cc
Q 020169 217 CLSD-AG 222 (330)
Q Consensus 217 ~l~D-SG 222 (330)
.+.+ +|
T Consensus 234 svligng 240 (498)
T COG2939 234 SVLIGNG 240 (498)
T ss_pred eeeecCC
Confidence 5554 45
No 18
>PLN02802 triacylglycerol lipase
Probab=80.66 E-value=5.7 Score=41.83 Aligned_cols=52 Identities=21% Similarity=0.311 Sum_probs=36.9
Q ss_pred CeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccccccCCCCchhhHHHHhh
Q 020169 184 DQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFA 241 (330)
Q Consensus 184 ~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~Fld~~~~~g~~~i~~~~~ 241 (330)
.+|+|||+|-||-=|.+.+.+++...+....|.++.=++ +-.|+..+.++++
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGs------PRVGN~aFA~~~~ 381 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGG------PRVGNRAFADRLN 381 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCC------CCcccHHHHHHHH
Confidence 479999999999999999999998877533455555333 2345555555553
No 19
>PLN02454 triacylglycerol lipase
Probab=79.94 E-value=9.7 Score=39.16 Aligned_cols=65 Identities=14% Similarity=0.210 Sum_probs=40.2
Q ss_pred HHHHHHHhCCCCcC-eEEEeeeChhhHHHHHhhHHHHhhCC--CCceEEEecCcccccccCCCCchhhHHHHhhh
Q 020169 171 AMQDLMAKGMQNAD-QALLSGCSAGGLASILHCDEFRDLFP--KTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAG 242 (330)
Q Consensus 171 vl~~L~~~gl~~a~-~VlLsG~SAGGlga~l~~d~vr~~lp--~~a~V~~l~DSG~Fld~~~~~g~~~i~~~~~~ 242 (330)
.++.|++ ..++.+ .|++||+|-||--|.+.+.+++.... ....|.++.=++ +--|+..+.+++..
T Consensus 215 ~V~~l~~-~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGs------PRVGN~~Fa~~~~~ 282 (414)
T PLN02454 215 KIKELLE-RYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGS------PQVGNKEFNDRFKE 282 (414)
T ss_pred HHHHHHH-hCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCC------CcccCHHHHHHHHh
Confidence 3444544 344433 69999999999999999988877532 223455544332 23455666666654
No 20
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=79.62 E-value=4.8 Score=38.30 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCccccccc
Q 020169 167 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDA 227 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~Fld~ 227 (330)
.+.+.++.|.+..-...++|.|.|+|.||.-+..-+.++.+.+ .++.+|.=+|.++..
T Consensus 95 ~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v---~~iv~LDPa~p~f~~ 152 (275)
T cd00707 95 ELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKL---GRITGLDPAGPLFSG 152 (275)
T ss_pred HHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCcc---ceeEEecCCcccccC
Confidence 3455666666531124678999999999998877766554443 246666557766554
No 21
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=78.20 E-value=2 Score=38.88 Aligned_cols=49 Identities=20% Similarity=0.275 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCCCcCe-EEEeeeChhhHHHHHhhHHHHhhCCCCceEEEec
Q 020169 167 IWLTAMQDLMAKGMQNADQ-ALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLS 219 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~-VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~ 219 (330)
+.++++.++.+ .++..+. ..|+|+|.||++|+..+=+--+.|. .|.+++
T Consensus 98 l~~el~p~i~~-~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~---~~~~~S 147 (251)
T PF00756_consen 98 LTEELIPYIEA-NYRTDPDRRAIAGHSMGGYGALYLALRHPDLFG---AVIAFS 147 (251)
T ss_dssp HHTHHHHHHHH-HSSEEECCEEEEEETHHHHHHHHHHHHSTTTES---EEEEES
T ss_pred hhccchhHHHH-hcccccceeEEeccCCCcHHHHHHHHhCccccc---cccccC
Confidence 44555555554 4553333 9999999999999965544334443 355555
No 22
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=75.57 E-value=8.8 Score=34.80 Aligned_cols=39 Identities=21% Similarity=0.217 Sum_probs=28.9
Q ss_pred cCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcc
Q 020169 183 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAG 222 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG 222 (330)
..+++++|+|-||-=|.+.+-+++...+. .++.++.=++
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~~-~~i~~~tFg~ 165 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGPG-SDVTVYTFGQ 165 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCCC-CceEEEEeCC
Confidence 46799999999999888888888877643 4466655333
No 23
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=75.49 E-value=5.5 Score=40.21 Aligned_cols=53 Identities=15% Similarity=0.223 Sum_probs=35.6
Q ss_pred HHHHHHHHHHh-CCCCcCeEEEeeeChhhHHHHHhhHHHHhh-CC--CCceEEEecCccc
Q 020169 168 WLTAMQDLMAK-GMQNADQALLSGCSAGGLASILHCDEFRDL-FP--KTTKVKCLSDAGM 223 (330)
Q Consensus 168 ~~Avl~~L~~~-gl~~a~~VlLsG~SAGGlga~l~~d~vr~~-lp--~~a~V~~l~DSG~ 223 (330)
.+|.+++|.++ .=.+|+++++-|.|-||.=+. ..+++. +. .+++..++.|-||
T Consensus 198 ~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa---~AL~~~~~~~~dgi~~~~ikDRsf 254 (365)
T PF05677_consen 198 YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQA---EALKKEVLKGSDGIRWFLIKDRSF 254 (365)
T ss_pred HHHHHHHHHhcccCCChheEEEeeccccHHHHH---HHHHhcccccCCCeeEEEEecCCc
Confidence 46788888863 235899999999999985322 233332 21 2477778888875
No 24
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=74.30 E-value=4.6 Score=32.37 Aligned_cols=45 Identities=22% Similarity=0.341 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHh-CCCCcCeEEEeeeChh-hHHHHHhhHHHHhhCCCCce
Q 020169 165 QRIWLTAMQDLMAK-GMQNADQALLSGCSAG-GLASILHCDEFRDLFPKTTK 214 (330)
Q Consensus 165 ~~n~~Avl~~L~~~-gl~~a~~VlLsG~SAG-Glga~l~~d~vr~~lp~~a~ 214 (330)
.++++.-+++.+++ .+..+++||+.|+|.| |+++ +|...|...+.
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAs-----RIa~aFg~gA~ 66 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLAS-----RIAAAFGAGAD 66 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHH-----HHHHHHCC--E
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHH-----HHHHHhcCCCC
Confidence 46788888888873 5677899999999998 4443 45555544333
No 25
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=73.49 E-value=4.3 Score=38.08 Aligned_cols=23 Identities=17% Similarity=0.384 Sum_probs=19.4
Q ss_pred CcCeEEEeeeChhhHHHHHhhHH
Q 020169 182 NADQALLSGCSAGGLASILHCDE 204 (330)
Q Consensus 182 ~a~~VlLsG~SAGGlga~l~~d~ 204 (330)
+.+++.|+|+|+||..|+..+-.
T Consensus 136 ~~~~~~~~G~S~GG~~a~~~a~~ 158 (275)
T TIGR02821 136 DGERQGITGHSMGGHGALVIALK 158 (275)
T ss_pred CCCceEEEEEChhHHHHHHHHHh
Confidence 56789999999999999876654
No 26
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=71.03 E-value=4.8 Score=37.49 Aligned_cols=32 Identities=31% Similarity=0.481 Sum_probs=24.2
Q ss_pred HHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhH
Q 020169 171 AMQDLMAKGMQNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 171 vl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d 203 (330)
|++.|+++|+.. +...++|+|||++-+.+++-
T Consensus 17 Vl~~L~e~gi~~-~~~~i~G~SAGAl~aa~~as 48 (233)
T cd07224 17 VLSLLIEAGVIN-ETTPLAGASAGSLAAACSAS 48 (233)
T ss_pred HHHHHHHcCCCC-CCCEEEEEcHHHHHHHHHHc
Confidence 678888877652 34689999999998776653
No 27
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=70.80 E-value=5.8 Score=40.30 Aligned_cols=39 Identities=31% Similarity=0.539 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHH---hC---CCCcCeEEEeeeChhhHHHHHhhHH
Q 020169 166 RIWLTAMQDLMA---KG---MQNADQALLSGCSAGGLASILHCDE 204 (330)
Q Consensus 166 ~n~~Avl~~L~~---~g---l~~a~~VlLsG~SAGGlga~l~~d~ 204 (330)
.-.+.+.++|++ +. ..++++.+|+|.|.||++|+.-+=.
T Consensus 264 ~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~ 308 (411)
T PRK10439 264 DFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLH 308 (411)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHh
Confidence 345556666654 12 3478899999999999998864433
No 28
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=70.72 E-value=5.8 Score=37.10 Aligned_cols=41 Identities=15% Similarity=0.262 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCC
Q 020169 167 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPK 211 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~ 211 (330)
.+.++++++..+.--++++|.++|.|+||.-+. .+.-.+|+
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~----~la~~~pd 120 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMAN----VLACAYPD 120 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHH----HHHHhCCc
Confidence 577889998874434889999999999996654 45555665
No 29
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=70.40 E-value=11 Score=31.97 Aligned_cols=28 Identities=21% Similarity=0.134 Sum_probs=21.9
Q ss_pred CcCeEEEeeeChhhHHHHHhhHHHHhhC
Q 020169 182 NADQALLSGCSAGGLASILHCDEFRDLF 209 (330)
Q Consensus 182 ~a~~VlLsG~SAGGlga~l~~d~vr~~l 209 (330)
...+++++|+|.||-=|.+-+-++....
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~ 53 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRG 53 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhcc
Confidence 4568999999999977777677776654
No 30
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=69.00 E-value=5.8 Score=34.69 Aligned_cols=31 Identities=23% Similarity=0.385 Sum_probs=23.9
Q ss_pred HHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhH
Q 020169 170 TAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 170 Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d 203 (330)
-|++.|.++|+. --+++|+|||++-+.+.+-
T Consensus 15 Gvl~aL~e~gi~---~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 15 GVAKALRERGPL---IDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHc
Confidence 467888777766 5689999999998776554
No 31
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=68.15 E-value=9.3 Score=34.35 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 167 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
.+.++|+.+.+++ -++++|+|.|.|-||.-|+.-+
T Consensus 89 ~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~ 123 (216)
T PF02230_consen 89 RLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLA 123 (216)
T ss_dssp HHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHH
Confidence 3455566655545 6778999999999998877654
No 32
>PRK13604 luxD acyl transferase; Provisional
Probab=66.83 E-value=12 Score=36.89 Aligned_cols=51 Identities=14% Similarity=0.097 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccc
Q 020169 164 GQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMF 224 (330)
Q Consensus 164 G~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~F 224 (330)
|..-++++++|++++ ..+++.|.|+|.||.-+++-+. .-+ ++ .++.|||+.
T Consensus 91 g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~----~~~--v~-~lI~~sp~~ 141 (307)
T PRK13604 91 GKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVIN----EID--LS-FLITAVGVV 141 (307)
T ss_pred cHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhc----CCC--CC-EEEEcCCcc
Confidence 677899999999874 3467999999999988654332 111 22 277888865
No 33
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=66.27 E-value=43 Score=32.61 Aligned_cols=128 Identities=16% Similarity=0.181 Sum_probs=63.8
Q ss_pred CCCcEEEEeeccccccCchhhhcccCCCCCCchhhhccCCccccCCCCCCCCCCcc--cccEEEE--ecCCCCccCCCCC
Q 020169 79 GANSWLIHLEGGGWCNTIRNCVYRKTTRRGSAKFMEKQLPFTGILSNKAEENPDFF--NWNRVKL--RYCDGASFSGDSQ 154 (330)
Q Consensus 79 gs~kwlI~leGGG~C~d~~tC~~R~~t~lGSS~~~~~~~~~~GIls~~~~~NP~F~--nwN~VfV--pYCdGd~~~G~~~ 154 (330)
..+-++|.|+||=-|.+..--.. ..|--. +...+ ...-..||+=+ ..|+||| |=-+|=++.-+..
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g~f~----e~GP~~-----~~~~~--~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~ 106 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWGLFG----ENGPFR-----INPDG--PYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPS 106 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHHHHC----TTSSEE-----EETTS--TSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGG
T ss_pred CCccEEEEecCCceecccccccc----ccCceE-----Eeecc--cccccccccccccccceEEEeecCceEEeeccccc
Confidence 45789999999966776542221 111100 00000 01124566322 4678999 4555555554332
Q ss_pred CCCceEEEehHHHHHHHHHHHHHhCCC--CcCeEEEeeeChhhHHHHHhhHHHHhhCCC----CceEEEec
Q 020169 155 NEGAQLYFRGQRIWLTAMQDLMAKGMQ--NADQALLSGCSAGGLASILHCDEFRDLFPK----TTKVKCLS 219 (330)
Q Consensus 155 ~~~~~l~frG~~n~~Avl~~L~~~gl~--~a~~VlLsG~SAGGlga~l~~d~vr~~lp~----~a~V~~l~ 219 (330)
......--....+.+++.+.+ .+ ++ +...+.|+|.|-||.=+..-+.+|.+.-.+ ...++.|.
T Consensus 107 ~~~~~~~~~a~~~~~fl~~f~-~~-~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~ 175 (415)
T PF00450_consen 107 DYVWNDDQAAEDLYEFLQQFF-QK-FPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIA 175 (415)
T ss_dssp GGS-SHHHHHHHHHHHHHHHH-HH-SGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEE
T ss_pred cccchhhHHHHHHHHHHHHhh-hh-hhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccce
Confidence 100011111222333333333 32 33 334799999999999888888888877643 36676665
No 34
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=66.17 E-value=12 Score=36.00 Aligned_cols=48 Identities=21% Similarity=0.305 Sum_probs=32.7
Q ss_pred CCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCce--EEEecCccccccc
Q 020169 179 GMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTK--VKCLSDAGMFLDA 227 (330)
Q Consensus 179 gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~--V~~l~DSG~Fld~ 227 (330)
|++...+|.+.|.|=||.+|..-+ .++..+-++.+ ++..+=.|+-.|.
T Consensus 66 gl~~~~~v~l~GySqGG~Aa~~AA-~l~~~YApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 66 GLSPSSRVALWGYSQGGQAALWAA-ELAPSYAPELNRDLVGAAAGGPPADL 115 (290)
T ss_pred CCCCCCCEEEEeeCccHHHHHHHH-HHhHHhCcccccceeEEeccCCccCH
Confidence 566668999999999999997554 45555444455 6666655554443
No 35
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=66.16 E-value=26 Score=32.47 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHh---CCCCcCeEEEeeeChhhHHHHH
Q 020169 167 IWLTAMQDLMAK---GMQNADQALLSGCSAGGLASIL 200 (330)
Q Consensus 167 n~~Avl~~L~~~---gl~~a~~VlLsG~SAGGlga~l 200 (330)
-+...++++++. ....+++|+|.|+|.||+-+-.
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~ 101 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARS 101 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHH
Confidence 344555665542 3578899999999999986544
No 36
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=65.93 E-value=19 Score=31.76 Aligned_cols=53 Identities=15% Similarity=0.208 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCc
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDA 221 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DS 221 (330)
..+...++.+++. .++ ...+|.|.|.||+=|+-=+..+.+. ...+...++.|+
T Consensus 50 ~la~~y~~~I~~~-~~~-gp~~L~G~S~Gg~lA~E~A~~Le~~-G~~v~~l~liD~ 102 (229)
T PF00975_consen 50 ELASRYAEAIRAR-QPE-GPYVLAGWSFGGILAFEMARQLEEA-GEEVSRLILIDS 102 (229)
T ss_dssp HHHHHHHHHHHHH-TSS-SSEEEEEETHHHHHHHHHHHHHHHT-T-SESEEEEESC
T ss_pred HHHHHHHHHhhhh-CCC-CCeeehccCccHHHHHHHHHHHHHh-hhccCceEEecC
Confidence 3445555555542 122 2799999999999999888888877 333555666775
No 37
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=65.89 E-value=32 Score=35.83 Aligned_cols=142 Identities=15% Similarity=0.121 Sum_probs=85.3
Q ss_pred CCCCceEEeccCC-CCCCcEEEEeeccccccCchhhhcccCCCCCCchhhhccCCccccCCCCCCCCCCcc--cccEEEE
Q 020169 65 GTLPGYHIHRGSG-SGANSWLIHLEGGGWCNTIRNCVYRKTTRRGSAKFMEKQLPFTGILSNKAEENPDFF--NWNRVKL 141 (330)
Q Consensus 65 GSp~gyy~~~g~g-~gs~kwlI~leGGG~C~d~~tC~~R~~t~lGSS~~~~~~~~~~GIls~~~~~NP~F~--nwN~VfV 141 (330)
|..-.||+-+... ..++-+||.|.||=-|-+..=- ...+|-... ...|- .-..||.=| ..|++||
T Consensus 56 ~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~----~~E~GPf~v-----~~~G~---tL~~N~ySWnk~aNiLfL 123 (454)
T KOG1282|consen 56 GRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGL----FEENGPFRV-----KYNGK---TLYLNPYSWNKEANILFL 123 (454)
T ss_pred CceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhh----hhhcCCeEE-----cCCCC---cceeCCccccccccEEEE
Confidence 4555677766542 1234599999999988876511 122221111 11221 345677222 3567788
Q ss_pred --ecCCCCccCCCCCCCCceEEEehHHHHHHHHHHHHHhCCC--CcCeEEEeeeChhhHHHHHhhHHHHhhCC----CCc
Q 020169 142 --RYCDGASFSGDSQNEGAQLYFRGQRIWLTAMQDLMAKGMQ--NADQALLSGCSAGGLASILHCDEFRDLFP----KTT 213 (330)
Q Consensus 142 --pYCdGd~~~G~~~~~~~~l~frG~~n~~Avl~~L~~~gl~--~a~~VlLsG~SAGGlga~l~~d~vr~~lp----~~a 213 (330)
|==+|-+++.+..+-...-.-...++..+..+|+.+ ++ +-....++|.|-+|.=+..-++.|.+.=. ...
T Consensus 124 d~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~k--fPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~i 201 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEK--FPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNI 201 (454)
T ss_pred ecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHh--ChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcc
Confidence 666666666665422223333458899999999974 34 34579999999999888777777776532 124
Q ss_pred eEEEecC
Q 020169 214 KVKCLSD 220 (330)
Q Consensus 214 ~V~~l~D 220 (330)
..++++=
T Consensus 202 NLkG~~I 208 (454)
T KOG1282|consen 202 NLKGYAI 208 (454)
T ss_pred cceEEEe
Confidence 5555553
No 38
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=64.41 E-value=7.1 Score=36.73 Aligned_cols=32 Identities=25% Similarity=0.383 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCCcCeE-EEeeeChhhHHHHHhh
Q 020169 171 AMQDLMAKGMQNADQA-LLSGCSAGGLASILHC 202 (330)
Q Consensus 171 vl~~L~~~gl~~a~~V-lLsG~SAGGlga~l~~ 202 (330)
|++.|+++|..--+++ .++|+|||++-+...+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a 49 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLL 49 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHh
Confidence 6788887776433333 7999999999877763
No 39
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=64.36 E-value=15 Score=33.56 Aligned_cols=56 Identities=20% Similarity=0.308 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccccc
Q 020169 167 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLD 226 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~Fld 226 (330)
-++.+++||.++..-++++|-|.|.|-||--|++ ++..+|.-..|.+++.|++..-
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALl----lAs~~~~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALL----LASRFPQISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHH----HHHHSSSEEEEEEES--SB--S
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHH----HHhcCCCccEEEEeCCceeEec
Confidence 3678999998754445689999999999988876 4556665334666777776553
No 40
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=62.94 E-value=16 Score=33.29 Aligned_cols=37 Identities=16% Similarity=0.464 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCC
Q 020169 168 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFP 210 (330)
Q Consensus 168 ~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp 210 (330)
..+.++.+++. .. ++.++|.|+|.||+-|.. ++++++
T Consensus 45 a~~~l~~~i~~-~~-~~~~~liGSSlGG~~A~~----La~~~~ 81 (187)
T PF05728_consen 45 AIAQLEQLIEE-LK-PENVVLIGSSLGGFYATY----LAERYG 81 (187)
T ss_pred HHHHHHHHHHh-CC-CCCeEEEEEChHHHHHHH----HHHHhC
Confidence 33445555552 22 333999999999976664 555655
No 41
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=62.88 E-value=7.5 Score=42.13 Aligned_cols=37 Identities=24% Similarity=0.470 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhCCCCcCeEEEeeeChhhH--HHHHh
Q 020169 165 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGL--ASILH 201 (330)
Q Consensus 165 ~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGl--ga~l~ 201 (330)
..-+.|+.+.|...|+...++++..|.||||+ ||++|
T Consensus 508 f~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N 546 (682)
T COG1770 508 FTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVAN 546 (682)
T ss_pred HHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHh
Confidence 45677889999988999999999999999996 44443
No 42
>PLN02442 S-formylglutathione hydrolase
Probab=62.34 E-value=7.9 Score=36.68 Aligned_cols=22 Identities=23% Similarity=0.299 Sum_probs=18.7
Q ss_pred CcCeEEEeeeChhhHHHHHhhH
Q 020169 182 NADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 182 ~a~~VlLsG~SAGGlga~l~~d 203 (330)
+.++++|+|.|+||++|+..+-
T Consensus 141 ~~~~~~i~G~S~GG~~a~~~a~ 162 (283)
T PLN02442 141 DTSRASIFGHSMGGHGALTIYL 162 (283)
T ss_pred CCCceEEEEEChhHHHHHHHHH
Confidence 6688999999999999986554
No 43
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=61.97 E-value=12 Score=34.96 Aligned_cols=36 Identities=11% Similarity=0.083 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
.-+.+++++|.+ ..+..++|+|.|.|.||+-++..+
T Consensus 83 ~d~~~~~~~l~~-~~~g~~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 83 ADIAAAIDAFRE-AAPHLRRIVAWGLCDAASAALLYA 118 (274)
T ss_pred HHHHHHHHHHHh-hCCCCCcEEEEEECHHHHHHHHHh
Confidence 457788888875 344557799999999999887764
No 44
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=61.88 E-value=7.5 Score=41.31 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHh
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILH 201 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~ 201 (330)
+=+.+.+++|.+.++-++++|-++|.|.||+-|+.-
T Consensus 455 ~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~ 490 (620)
T COG1506 455 EDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLA 490 (620)
T ss_pred HHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHH
Confidence 345666777766678888899999999999998763
No 45
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=61.68 E-value=9.6 Score=36.06 Aligned_cols=31 Identities=26% Similarity=0.107 Sum_probs=21.1
Q ss_pred HHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 171 AMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 171 vl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
|++.|++++.....+ .++|+|||++-+...+
T Consensus 18 Vl~aL~e~g~~~~~d-~i~GtSAGAl~aa~~a 48 (245)
T cd07218 18 VAVCLKKYAPHLLLN-KISGASAGALAACCLL 48 (245)
T ss_pred HHHHHHHhCcccCCC-eEEEEcHHHHHHHHHH
Confidence 567777766332222 3999999999887643
No 46
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=61.25 E-value=9.5 Score=35.82 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=23.0
Q ss_pred HHHHHHHhCCCCcCe-EEEeeeChhhHHHHHhh
Q 020169 171 AMQDLMAKGMQNADQ-ALLSGCSAGGLASILHC 202 (330)
Q Consensus 171 vl~~L~~~gl~~a~~-VlLsG~SAGGlga~l~~ 202 (330)
|++.|+++|.....+ -.++|+|||++-+...+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a 49 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVL 49 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHH
Confidence 677787777543332 48999999999877544
No 47
>PLN03037 lipase class 3 family protein; Provisional
Probab=60.59 E-value=24 Score=37.41 Aligned_cols=55 Identities=16% Similarity=0.258 Sum_probs=38.2
Q ss_pred CcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccccccCCCCchhhHHHHhhh
Q 020169 182 NADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAG 242 (330)
Q Consensus 182 ~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~Fld~~~~~g~~~i~~~~~~ 242 (330)
....|+|||+|-||-=|.+++-+++...|....|.++.=++ +-.|+..+.++++.
T Consensus 316 e~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGs------PRVGN~aFA~~~~~ 370 (525)
T PLN03037 316 EEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGA------PRVGNLAFKEKLNE 370 (525)
T ss_pred CcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecC------CCccCHHHHHHHHh
Confidence 45679999999999999999999998887532455544332 33455565555543
No 48
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=60.55 E-value=9.5 Score=36.71 Aligned_cols=65 Identities=22% Similarity=0.318 Sum_probs=40.1
Q ss_pred CCCcCeEEEeeeChhhHHHHHhhHHHHhhCC------CCceEEEec-CcccccccCCCCchhhHHHHhhhhh
Q 020169 180 MQNADQALLSGCSAGGLASILHCDEFRDLFP------KTTKVKCLS-DAGMFLDAVDVSGGHTLRNMFAGVV 244 (330)
Q Consensus 180 l~~a~~VlLsG~SAGGlga~l~~d~vr~~lp------~~a~V~~l~-DSG~Fld~~~~~g~~~i~~~~~~vv 244 (330)
...++.|+++|||-||+|--+--..-++-+. +-.+..-|. |+|.+.---|++-.+.++.+-..+.
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr 75 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVR 75 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHh
Confidence 3568899999999999996665444433221 001122233 8898866667766666666545444
No 49
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=60.39 E-value=9.2 Score=36.55 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=24.2
Q ss_pred HHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHH
Q 020169 172 MQDLMAKGMQNADQALLSGCSAGGLASILHCDE 204 (330)
Q Consensus 172 l~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~ 204 (330)
+++++. -+++++++++.|+|||+-=++.-.-+
T Consensus 125 v~filk-~~~n~k~l~~gGHSaGAHLa~qav~R 156 (270)
T KOG4627|consen 125 VNFILK-YTENTKVLTFGGHSAGAHLAAQAVMR 156 (270)
T ss_pred HHHHHH-hcccceeEEEcccchHHHHHHHHHHH
Confidence 566665 68999999999999999665544333
No 50
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=60.12 E-value=22 Score=35.29 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHH
Q 020169 168 WLTAMQDLMAKGMQNADQALLSGCSAGGLASIL 200 (330)
Q Consensus 168 ~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l 200 (330)
+++.++.|+.+.=-++.+|+++|-|+||.=+..
T Consensus 128 lr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~ 160 (312)
T COG3509 128 LRALVAKLVNEYGIDPARVYVTGLSNGGRMANR 160 (312)
T ss_pred HHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHH
Confidence 677788887643346789999999999964433
No 51
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=58.23 E-value=4.9 Score=42.16 Aligned_cols=27 Identities=30% Similarity=0.501 Sum_probs=21.9
Q ss_pred CCCCcCeEEEeeeChhhHHHHHhhHHHH
Q 020169 179 GMQNADQALLSGCSAGGLASILHCDEFR 206 (330)
Q Consensus 179 gl~~a~~VlLsG~SAGGlga~l~~d~vr 206 (330)
|++ ++++||+|-|+|.+||+++...+.
T Consensus 353 gF~-~~qLILSGlSMGTfgAlYYga~l~ 379 (511)
T TIGR03712 353 GFD-HDQLILSGLSMGTFGALYYGAKLS 379 (511)
T ss_pred CCC-HHHeeeccccccchhhhhhcccCC
Confidence 554 567999999999999999776543
No 52
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=58.18 E-value=12 Score=39.43 Aligned_cols=37 Identities=19% Similarity=0.174 Sum_probs=29.6
Q ss_pred ehHHHHHHHHHHHHHh--CCC-CcCeEEEeeeChhhHHHH
Q 020169 163 RGQRIWLTAMQDLMAK--GMQ-NADQALLSGCSAGGLASI 199 (330)
Q Consensus 163 rG~~n~~Avl~~L~~~--gl~-~a~~VlLsG~SAGGlga~ 199 (330)
-|..-...+|+|..++ .|+ ++++|-|.|.|||+..+.
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~ 195 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASIL 195 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHH
Confidence 4667778889998774 344 899999999999998754
No 53
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=58.15 E-value=27 Score=33.12 Aligned_cols=36 Identities=19% Similarity=0.193 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHh
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILH 201 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~ 201 (330)
+-+.++++.|....-....+++|.|+|.||.-++..
T Consensus 116 ~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~ 151 (330)
T PLN02298 116 EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLI 151 (330)
T ss_pred HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHH
Confidence 446777888765211123469999999999877643
No 54
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=55.97 E-value=41 Score=27.94 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=24.9
Q ss_pred CeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccc
Q 020169 184 DQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMF 224 (330)
Q Consensus 184 ~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~F 224 (330)
++++|.|+|.||.-++..+. ..|+.++-.++.+++..
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAA----RYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHH----HSGGGEEEEEEESESSS
T ss_pred cccccccccccccccccccc----ccccccccceeeccccc
Confidence 67999999999987776553 35544444455555554
No 55
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=54.15 E-value=25 Score=33.59 Aligned_cols=61 Identities=23% Similarity=0.261 Sum_probs=36.4
Q ss_pred ehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHH--HhhCCCCceEEEecCccccccc
Q 020169 163 RGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEF--RDLFPKTTKVKCLSDAGMFLDA 227 (330)
Q Consensus 163 rG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~v--r~~lp~~a~V~~l~DSG~Fld~ 227 (330)
+-..=+++||..|.++ -..+++=+.|+|.||++++...-.- ...+|+- -+++.=+|.|-..
T Consensus 84 ~qa~wl~~vl~~L~~~--Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l--~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 84 KQAKWLKKVLKYLKKK--YHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKL--NKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHHHHHHHHC--C--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EE--EEEEEES--TTTT
T ss_pred HHHHHHHHHHHHHHHh--cCCCEEeEEEECccHHHHHHHHHHhccCCCCccc--ceEEEeccccCcc
Confidence 3345678899999873 3577899999999999987543332 2336652 3344445666443
No 56
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=53.93 E-value=26 Score=33.56 Aligned_cols=58 Identities=19% Similarity=0.190 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccccccCCCCchhhHHHH
Q 020169 168 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNM 239 (330)
Q Consensus 168 ~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~Fld~~~~~g~~~i~~~ 239 (330)
+.+++++|.+. ..++|+|.|.|.||.=++..+ ...|..++ ++.+..+-++|...++.+
T Consensus 86 v~~ai~~L~~~---~~~~v~LvG~SmGG~vAl~~A----~~~p~~v~-------~lVL~~P~~~g~~~l~~~ 143 (266)
T TIGR03101 86 VAAAYRWLIEQ---GHPPVTLWGLRLGALLALDAA----NPLAAKCN-------RLVLWQPVVSGKQQLQQF 143 (266)
T ss_pred HHHHHHHHHhc---CCCCEEEEEECHHHHHHHHHH----HhCccccc-------eEEEeccccchHHHHHHH
Confidence 44566777653 256899999999998877543 33443221 122333445666555554
No 57
>PLN00021 chlorophyllase
Probab=53.32 E-value=21 Score=34.81 Aligned_cols=39 Identities=15% Similarity=0.057 Sum_probs=27.1
Q ss_pred HHHHHHHHHHh---C-----CCCcCeEEEeeeChhhHHHHHhhHHHH
Q 020169 168 WLTAMQDLMAK---G-----MQNADQALLSGCSAGGLASILHCDEFR 206 (330)
Q Consensus 168 ~~Avl~~L~~~---g-----l~~a~~VlLsG~SAGGlga~l~~d~vr 206 (330)
..++++|+.+. - -.+.+++.|.|+|+||..++.-+-...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcc
Confidence 45667776541 1 134578999999999999887665443
No 58
>PRK11460 putative hydrolase; Provisional
Probab=51.96 E-value=23 Score=32.56 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHH
Q 020169 168 WLTAMQDLMAKGMQNADQALLSGCSAGGLASIL 200 (330)
Q Consensus 168 ~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l 200 (330)
+.+.++++..+.--+.++|+|.|.|.||.-++.
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~ 119 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALE 119 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHH
Confidence 334555555432235678999999999988875
No 59
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=51.93 E-value=38 Score=29.43 Aligned_cols=32 Identities=25% Similarity=0.457 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 168 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 168 ~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
---+++.|.++++. + =+++|.|||++-+.+.+
T Consensus 15 ~~Gvl~~L~~~~~~-~--d~i~GtSaGal~a~~~a 46 (175)
T cd07205 15 HIGVLKALEEAGIP-I--DIVSGTSAGAIVGALYA 46 (175)
T ss_pred HHHHHHHHHHcCCC-e--eEEEEECHHHHHHHHHH
Confidence 34567888776653 3 48999999999876655
No 60
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=51.38 E-value=20 Score=36.77 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=26.4
Q ss_pred HHHHHHHHHHh--CC-CCcCeEEEeeeChhhHHHHHh
Q 020169 168 WLTAMQDLMAK--GM-QNADQALLSGCSAGGLASILH 201 (330)
Q Consensus 168 ~~Avl~~L~~~--gl-~~a~~VlLsG~SAGGlga~l~ 201 (330)
..++|+|+..+ .+ +++++|.|.|.||||..+-++
T Consensus 176 q~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l 212 (545)
T KOG1516|consen 176 QLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLL 212 (545)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHH
Confidence 45677887663 34 599999999999999887554
No 61
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=50.37 E-value=36 Score=28.84 Aligned_cols=31 Identities=19% Similarity=0.360 Sum_probs=21.3
Q ss_pred HHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHH
Q 020169 172 MQDLMAKGMQNADQALLSGCSAGGLASILHCDE 204 (330)
Q Consensus 172 l~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~ 204 (330)
++.+++ .+ ..++++|.|.|+||.-++..+..
T Consensus 60 ~~~~~~-~~-~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 60 LATLLD-QL-GIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred HHHHHH-Hc-CCCeEEEEEeccHHHHHHHHHHh
Confidence 444443 22 34679999999999887766554
No 62
>PLN02324 triacylglycerol lipase
Probab=49.78 E-value=50 Score=34.09 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=27.1
Q ss_pred HHHHHHHHhCCCCc-CeEEEeeeChhhHHHHHhhHHHHhh
Q 020169 170 TAMQDLMAKGMQNA-DQALLSGCSAGGLASILHCDEFRDL 208 (330)
Q Consensus 170 Avl~~L~~~gl~~a-~~VlLsG~SAGGlga~l~~d~vr~~ 208 (330)
+-+..|++ ..++. .+|++||+|-||-=|.+.+-++.+.
T Consensus 201 ~eV~~L~~-~Yp~e~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 201 GELKRLLE-LYKNEEISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred HHHHHHHH-HCCCCCceEEEecCcHHHHHHHHHHHHHHHh
Confidence 33444554 34544 4799999999998888888877653
No 63
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=49.10 E-value=22 Score=31.66 Aligned_cols=37 Identities=19% Similarity=0.142 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
..+++++++|.+..-...++|-+.|.|.||.-++.-+
T Consensus 80 ~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 80 ADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 4456778888764334788999999999998887543
No 64
>PLN02310 triacylglycerol lipase
Probab=49.07 E-value=49 Score=34.03 Aligned_cols=52 Identities=19% Similarity=0.238 Sum_probs=35.3
Q ss_pred cCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccccccCCCCchhhHHHHhh
Q 020169 183 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFA 241 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~Fld~~~~~g~~~i~~~~~ 241 (330)
..+|++||+|-||-=|.+.+..++...|. ..|.++.=+++ -.|+..+.+.++
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~dl~~~~~~-~~v~vyTFGsP------RVGN~~Fa~~~~ 259 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYEAATTIPD-LFVSVISFGAP------RVGNIAFKEKLN 259 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHHHHHhCcC-cceeEEEecCC------CcccHHHHHHHH
Confidence 35799999999999999999888877664 34555443332 345555555444
No 65
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=48.99 E-value=33 Score=35.19 Aligned_cols=80 Identities=20% Similarity=0.279 Sum_probs=49.2
Q ss_pred CceEEEehHHHHHHHHHHHHHh-CCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccccccCCCCchhh
Q 020169 157 GAQLYFRGQRIWLTAMQDLMAK-GMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHT 235 (330)
Q Consensus 157 ~~~l~frG~~n~~Avl~~L~~~-gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~Fld~~~~~g~~~ 235 (330)
+...-+.-..-.+||++..+.. |+ ..+++||-|.|-||+-+. +.+..+|. ++- ++-|+-| =|.-... -..
T Consensus 284 G~P~p~n~~nA~DaVvQfAI~~Lgf-~~edIilygWSIGGF~~~----waAs~YPd-Vka-vvLDAtF-DDllpLA-l~r 354 (517)
T KOG1553|consen 284 GLPYPVNTLNAADAVVQFAIQVLGF-RQEDIILYGWSIGGFPVA----WAASNYPD-VKA-VVLDATF-DDLLPLA-LFR 354 (517)
T ss_pred CCCCcccchHHHHHHHHHHHHHcCC-CccceEEEEeecCCchHH----HHhhcCCC-ceE-EEeecch-hhhhhHH-hhh
Confidence 4455566667788888887762 44 457799999999997764 56777886 322 2336643 2221111 123
Q ss_pred HHHHhhhhhh
Q 020169 236 LRNMFAGVVS 245 (330)
Q Consensus 236 i~~~~~~vv~ 245 (330)
|-.+|.++|+
T Consensus 355 MP~~~~giV~ 364 (517)
T KOG1553|consen 355 MPTFFSGIVE 364 (517)
T ss_pred chHHHHHHHH
Confidence 4456777663
No 66
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=48.95 E-value=20 Score=35.05 Aligned_cols=45 Identities=22% Similarity=0.220 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHH--hhCCC
Q 020169 165 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFR--DLFPK 211 (330)
Q Consensus 165 ~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr--~~lp~ 211 (330)
..=++.+|.+|.++ -+-+++=+.|+|+||+|...+.-... +.+|+
T Consensus 119 s~wlk~~msyL~~~--Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~ 165 (288)
T COG4814 119 SKWLKKAMSYLQKH--YNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPP 165 (288)
T ss_pred HHHHHHHHHHHHHh--cCCceeeeeeeccccHHHHHHHHHhcCCCCCcc
Confidence 44578999999873 23445668899999999887766655 35776
No 67
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=48.54 E-value=16 Score=39.76 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHH
Q 020169 165 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLA 197 (330)
Q Consensus 165 ~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlg 197 (330)
..-+.+..++|.++|+..++++-+.|.||||+=
T Consensus 530 f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlL 562 (712)
T KOG2237|consen 530 FDDFIACAEYLVENGYTQPSKLAIEGGSAGGLL 562 (712)
T ss_pred HHHHHHHHHHHHHcCCCCccceeEecccCccch
Confidence 455788899999999999999999999999974
No 68
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=48.41 E-value=22 Score=31.18 Aligned_cols=31 Identities=26% Similarity=0.457 Sum_probs=22.1
Q ss_pred HHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 169 LTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 169 ~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
-.|++.|.+++..- =+++|.|||++=+.+.+
T Consensus 15 ~Gvl~~L~e~~~~~---d~i~GtSaGai~aa~~a 45 (194)
T cd07207 15 IGALKALEEAGILK---KRVAGTSAGAITAALLA 45 (194)
T ss_pred HHHHHHHHHcCCCc---ceEEEECHHHHHHHHHH
Confidence 35677777766543 68999999998665444
No 69
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=48.04 E-value=22 Score=34.35 Aligned_cols=40 Identities=18% Similarity=0.147 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhCC---------CCcCeEEEeeeChhhHHHHHhhHHHH
Q 020169 166 RIWLTAMQDLMAKGM---------QNADQALLSGCSAGGLASILHCDEFR 206 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl---------~~a~~VlLsG~SAGGlga~l~~d~vr 206 (330)
+-++++++||.+ ++ .+.+++-|+|+|+||-.++.-+-..+
T Consensus 65 ~~~~~vi~Wl~~-~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~ 113 (259)
T PF12740_consen 65 ASAAEVIDWLAK-GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNA 113 (259)
T ss_pred HHHHHHHHHHHh-cchhhccccccccccceEEeeeCCCCHHHHHHHhhhc
Confidence 457888999865 32 25578999999999998876555443
No 70
>PRK10673 acyl-CoA esterase; Provisional
Probab=48.03 E-value=33 Score=30.42 Aligned_cols=36 Identities=22% Similarity=0.214 Sum_probs=23.0
Q ss_pred cCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcc
Q 020169 183 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAG 222 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG 222 (330)
.+++.|.|+|.||.-++..+.. .|..++-.++.|++
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~----~~~~v~~lvli~~~ 115 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTAL----APDRIDKLVAIDIA 115 (255)
T ss_pred CCceEEEEECHHHHHHHHHHHh----CHhhcceEEEEecC
Confidence 3569999999999877755433 44434444444544
No 71
>PRK10349 carboxylesterase BioH; Provisional
Probab=48.03 E-value=45 Score=29.93 Aligned_cols=49 Identities=16% Similarity=0.222 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccc
Q 020169 169 LTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMF 224 (330)
Q Consensus 169 ~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~F 224 (330)
....+++...+ .+++.|.|.|.||.-++..+- ..|..++-.++.|+...
T Consensus 62 ~~~~~~l~~~~---~~~~~lvGhS~Gg~ia~~~a~----~~p~~v~~lili~~~~~ 110 (256)
T PRK10349 62 ADMAEAVLQQA---PDKAIWLGWSLGGLVASQIAL----THPERVQALVTVASSPC 110 (256)
T ss_pred HHHHHHHHhcC---CCCeEEEEECHHHHHHHHHHH----hChHhhheEEEecCccc
Confidence 44555555432 367999999999998775443 34544444445566433
No 72
>PLN02965 Probable pheophorbidase
Probab=47.73 E-value=46 Score=30.16 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=23.2
Q ss_pred CCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCc
Q 020169 180 MQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDA 221 (330)
Q Consensus 180 l~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DS 221 (330)
++..++++|.|+|.||.=+...+. ..|+.++-.++.++
T Consensus 68 l~~~~~~~lvGhSmGG~ia~~~a~----~~p~~v~~lvl~~~ 105 (255)
T PLN02965 68 LPPDHKVILVGHSIGGGSVTEALC----KFTDKISMAIYVAA 105 (255)
T ss_pred cCCCCCEEEEecCcchHHHHHHHH----hCchheeEEEEEcc
Confidence 333368999999999975554332 34554443444444
No 73
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=47.15 E-value=30 Score=32.30 Aligned_cols=42 Identities=14% Similarity=0.081 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHH
Q 020169 165 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFR 206 (330)
Q Consensus 165 ~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr 206 (330)
..-+++++++|.+....++++|.++|.|.||.=|++.+....
T Consensus 93 ~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~ 134 (236)
T COG0412 93 LADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP 134 (236)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC
Confidence 345788999998755578899999999999998888776643
No 74
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=47.15 E-value=40 Score=28.69 Aligned_cols=51 Identities=20% Similarity=0.276 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCccccc
Q 020169 168 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFL 225 (330)
Q Consensus 168 ~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~Fl 225 (330)
++.+.+++... +. +++.|.|.|.||.-++.-+. ..|+.++-.++.++...+
T Consensus 52 ~~~~~~~~~~~-~~--~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~il~~~~~~~ 102 (245)
T TIGR01738 52 LADAAEAIAAQ-AP--DPAIWLGWSLGGLVALHIAA----THPDRVRALVTVASSPCF 102 (245)
T ss_pred HHHHHHHHHHh-CC--CCeEEEEEcHHHHHHHHHHH----HCHHhhheeeEecCCccc
Confidence 55666666552 22 57999999999987765443 344333333444554433
No 75
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=46.88 E-value=48 Score=31.03 Aligned_cols=24 Identities=29% Similarity=0.512 Sum_probs=18.6
Q ss_pred CCCcCeEEEeeeChhhHHHHHhhH
Q 020169 180 MQNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 180 l~~a~~VlLsG~SAGGlga~l~~d 203 (330)
+...++++|.|+|.||+-+...+.
T Consensus 83 l~~~~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 83 LPENEKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred cCCCCCEEEEEECchHHHHHHHHH
Confidence 334578999999999997666653
No 76
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=46.67 E-value=59 Score=30.43 Aligned_cols=55 Identities=9% Similarity=0.059 Sum_probs=38.7
Q ss_pred ehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCC---CCceEEEecCc
Q 020169 163 RGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFP---KTTKVKCLSDA 221 (330)
Q Consensus 163 rG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp---~~a~V~~l~DS 221 (330)
.|..++.+.|+... ...+.|+|.|.|.|+.-+-....++.+.-. ...++..+.|-
T Consensus 31 ~G~~~L~~ai~~~~----~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 31 EGVANLDAAIRAAI----AAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHHHhhc----cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 46667777666543 366789999999999999998888887432 23455555554
No 77
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=45.94 E-value=56 Score=29.04 Aligned_cols=35 Identities=20% Similarity=0.060 Sum_probs=22.4
Q ss_pred cCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCc
Q 020169 183 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDA 221 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DS 221 (330)
.++++|.|.|.||.-++..+ ...|..++..++.++
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a----~~~p~~v~~~v~~~~ 128 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLA----LDGPVTPRMVVGINA 128 (278)
T ss_pred CCCceEEEECccHHHHHHHH----HhCCcccceEEEEcC
Confidence 36789999999998877554 345543333333343
No 78
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=45.61 E-value=33 Score=33.25 Aligned_cols=41 Identities=15% Similarity=0.269 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCC
Q 020169 165 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFP 210 (330)
Q Consensus 165 ~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp 210 (330)
+.-++||-++|.+. .++.++|+|-|.|.|..-++ +++.+.|
T Consensus 112 y~Di~avye~Lr~~-~g~~~~Iil~G~SiGt~~tv----~Lasr~~ 152 (258)
T KOG1552|consen 112 YADIKAVYEWLRNR-YGSPERIILYGQSIGTVPTV----DLASRYP 152 (258)
T ss_pred hhhHHHHHHHHHhh-cCCCceEEEEEecCCchhhh----hHhhcCC
Confidence 45689999999873 34889999999999987633 4555555
No 79
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=45.57 E-value=46 Score=34.51 Aligned_cols=56 Identities=16% Similarity=0.083 Sum_probs=36.0
Q ss_pred HHHHHHHHHHH-hCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCC-ceEEEecCccccccc
Q 020169 167 IWLTAMQDLMA-KGMQNADQALLSGCSAGGLASILHCDEFRDLFPKT-TKVKCLSDAGMFLDA 227 (330)
Q Consensus 167 n~~Avl~~L~~-~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~-a~V~~l~DSG~Fld~ 227 (330)
.+.+.+++|.+ .++ ..++|.|.|+|.||.-|..-+. ..|.. .++.+|.=+|+++..
T Consensus 102 ~la~lI~~L~~~~gl-~l~~VhLIGHSLGAhIAg~ag~----~~p~rV~rItgLDPAgP~F~~ 159 (442)
T TIGR03230 102 DVAKFVNWMQEEFNY-PWDNVHLLGYSLGAHVAGIAGS----LTKHKVNRITGLDPAGPTFEY 159 (442)
T ss_pred HHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHHH----hCCcceeEEEEEcCCCCcccc
Confidence 35566777754 243 5688999999999987776443 34432 246666557766544
No 80
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=45.37 E-value=42 Score=33.93 Aligned_cols=35 Identities=9% Similarity=0.049 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHH
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASIL 200 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l 200 (330)
...++++++|.....-+.++|.+.|.|.||+-++.
T Consensus 247 ~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~ 281 (414)
T PRK05077 247 LLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVR 281 (414)
T ss_pred HHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHH
Confidence 34478999997643336789999999999987764
No 81
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=45.24 E-value=53 Score=32.47 Aligned_cols=83 Identities=14% Similarity=0.115 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCC-CCceEEEecCcccccccCCCCchhhHHHHhhhhh-
Q 020169 167 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFP-KTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAGVV- 244 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp-~~a~V~~l~DSG~Fld~~~~~g~~~i~~~~~~vv- 244 (330)
-+++.++.|++ .++ --+|++||+|.||-=|.+-+.++...-. ...+|+++.=++ +-.|+....+.+...+
T Consensus 156 ~~~~~~~~L~~-~~~-~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~------PRvGn~~fa~~~d~~~~ 227 (336)
T KOG4569|consen 156 GLDAELRRLIE-LYP-NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQ------PRVGNLAFAEWHDELVP 227 (336)
T ss_pred HHHHHHHHHHH-hcC-CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecC------CCcccHHHHHHHHhhCC
Confidence 45667777776 345 4569999999999777777777776543 234566665443 3345555554444333
Q ss_pred ------hhhcccccCCccc
Q 020169 245 ------SLQEVQKNLPITC 257 (330)
Q Consensus 245 ------~l~~~~~~lp~~C 257 (330)
..+.+...+|..+
T Consensus 228 ~s~Rvv~~~DiVP~lP~~~ 246 (336)
T KOG4569|consen 228 YSFRVVHRRDIVPHLPGIV 246 (336)
T ss_pred cEEEEEcCCCCCCCCCCcc
Confidence 3344455666555
No 82
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=44.28 E-value=56 Score=36.69 Aligned_cols=67 Identities=15% Similarity=0.097 Sum_probs=36.3
Q ss_pred CCCcCeEEEeeeChhhHHHHH---hhHHHHhhCCCCceEEEecCcccccccCCCCchhhHHHHhhhhhhhhccccc
Q 020169 180 MQNADQALLSGCSAGGLASIL---HCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAGVVSLQEVQKN 252 (330)
Q Consensus 180 l~~a~~VlLsG~SAGGlga~l---~~d~vr~~lp~~a~V~~l~DSG~Fld~~~~~g~~~i~~~~~~vv~l~~~~~~ 252 (330)
.+.|+.|+|.|+|.||+=|.. +-+++..... .+|.=|. -...++..-++.+-+||..+++.|+...+
T Consensus 178 ~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVn-----tIITlss-PH~a~Pl~~D~~l~~fy~~vnn~W~k~~~ 247 (973)
T KOG3724|consen 178 SPLPHSVILVGHSMGGIVARATLTLKNEVQGSVN-----TIITLSS-PHAAPPLPLDRFLLRFYLLVNNYWNKLQN 247 (973)
T ss_pred CCCCceEEEEeccchhHHHHHHHhhhhhccchhh-----hhhhhcC-cccCCCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 456899999999999975432 2222222111 0111111 11223334456777788888877664433
No 83
>PRK00870 haloalkane dehalogenase; Provisional
Probab=44.07 E-value=90 Score=29.03 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=24.1
Q ss_pred cCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCccc
Q 020169 183 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGM 223 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~ 223 (330)
.++++|.|+|.||.=+..-+ ...|+.++-.++.|++.
T Consensus 114 ~~~v~lvGhS~Gg~ia~~~a----~~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 114 LTDVTLVCQDWGGLIGLRLA----AEHPDRFARLVVANTGL 150 (302)
T ss_pred CCCEEEEEEChHHHHHHHHH----HhChhheeEEEEeCCCC
Confidence 35799999999997665433 33455444445566654
No 84
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=43.03 E-value=98 Score=31.82 Aligned_cols=132 Identities=15% Similarity=0.143 Sum_probs=62.9
Q ss_pred CCCceEEecc-CCCCCCcEEEEeeccccccCchhhhcccCCCCCCchhhhccCCccccCCCCCCCCCCcc--cccEEEEe
Q 020169 66 TLPGYHIHRG-SGSGANSWLIHLEGGGWCNTIRNCVYRKTTRRGSAKFMEKQLPFTGILSNKAEENPDFF--NWNRVKLR 142 (330)
Q Consensus 66 Sp~gyy~~~g-~g~gs~kwlI~leGGG~C~d~~tC~~R~~t~lGSS~~~~~~~~~~GIls~~~~~NP~F~--nwN~VfVp 142 (330)
+--.|++-+. .....+-++|.|.||=-|.+..-+..- .|--..-..+.+ | -...-..||.=+ ..|++||=
T Consensus 50 ~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e----~GP~~~~~~~~~--~-~~~~l~~n~~sW~~~anllfiD 122 (433)
T PLN03016 50 VQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFE----NGPVGLKFEVFN--G-SAPSLFSTTYSWTKMANIIFLD 122 (433)
T ss_pred eEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHh----cCCceeeccccC--C-CCCceeeCCCchhhcCcEEEec
Confidence 3344555433 223467899999999666664433321 121110000000 1 001224566322 35677884
Q ss_pred cC--CCCccCCCCCCCCceEEEehHHHHHHHHHHHHHhCCC--CcCeEEEeeeChhhHHHHHhhHHHHh
Q 020169 143 YC--DGASFSGDSQNEGAQLYFRGQRIWLTAMQDLMAKGMQ--NADQALLSGCSAGGLASILHCDEFRD 207 (330)
Q Consensus 143 YC--dGd~~~G~~~~~~~~l~frG~~n~~Avl~~L~~~gl~--~a~~VlLsG~SAGGlga~l~~d~vr~ 207 (330)
-= +|=+++-+..+..... -....+.+++.+++.. ++ ....+.|+|.|-||.=+..-+.+|.+
T Consensus 123 qPvGtGfSy~~~~~~~~~d~-~~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yvP~la~~i~~ 188 (433)
T PLN03016 123 QPVGSGFSYSKTPIDKTGDI-SEVKRTHEFLQKWLSR--HPQYFSNPLYVVGDSYSGMIVPALVQEISQ 188 (433)
T ss_pred CCCCCCccCCCCCCCccCCH-HHHHHHHHHHHHHHHh--ChhhcCCCEEEEccCccceehHHHHHHHHh
Confidence 33 3333322111100000 0113444555555533 33 24569999999999776666666654
No 85
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=42.76 E-value=29 Score=35.61 Aligned_cols=30 Identities=23% Similarity=0.560 Sum_probs=22.4
Q ss_pred HHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 170 TAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 170 Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
-|++.|.++|+.- + +++|+|||++-+.+.+
T Consensus 90 GVLkaL~E~gl~p-~--vIsGTSaGAivAal~a 119 (421)
T cd07230 90 GVLKALFEANLLP-R--IISGSSAGSIVAAILC 119 (421)
T ss_pred HHHHHHHHcCCCC-C--EEEEECHHHHHHHHHH
Confidence 3677787777653 2 7999999998876655
No 86
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=42.65 E-value=28 Score=33.12 Aligned_cols=30 Identities=23% Similarity=0.242 Sum_probs=20.2
Q ss_pred HHHHHHHhCCCC-cCeEEEeeeChhhHHHHH
Q 020169 171 AMQDLMAKGMQN-ADQALLSGCSAGGLASIL 200 (330)
Q Consensus 171 vl~~L~~~gl~~-a~~VlLsG~SAGGlga~l 200 (330)
|++.|++++..- .+--.++|+|||++.+..
T Consensus 22 Vl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~ 52 (249)
T cd07220 22 VASCLLEHAPFLVANARKIYGASAGALTATA 52 (249)
T ss_pred HHHHHHhcCCcccccCCeEEEEcHHHHHHHH
Confidence 567777755321 113568899999998775
No 87
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=41.48 E-value=2.5e+02 Score=28.97 Aligned_cols=116 Identities=14% Similarity=0.115 Sum_probs=56.1
Q ss_pred CCCcEEEEeeccccccCchhhhcccCCCCCCchhhhccCCccccCCCCCCCCCCcc--cccEEEEecCCCCccCCCCC-C
Q 020169 79 GANSWLIHLEGGGWCNTIRNCVYRKTTRRGSAKFMEKQLPFTGILSNKAEENPDFF--NWNRVKLRYCDGASFSGDSQ-N 155 (330)
Q Consensus 79 gs~kwlI~leGGG~C~d~~tC~~R~~t~lGSS~~~~~~~~~~GIls~~~~~NP~F~--nwN~VfVpYCdGd~~~G~~~-~ 155 (330)
..+-++|+|+||=-|.+..-... ..|--.. ...+ ..-..||.=+ ..|+|||--=-|.-|+=... +
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~f~----E~GP~~i-----~~~~---~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~ 142 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFALLA----ENGPCLM-----NETT---GDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKAD 142 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhhhc----cCCCeEE-----eCCC---CceeECCcccccccCeEEEeCCCCcCcccCCCCC
Confidence 35679999999977765432211 1221110 0010 1223466211 24567774333332221111 1
Q ss_pred CCceEEEehHHHHHHHHHHHHHhCCCC--cCeEEEeeeChhhHHHHHhhHHHHhh
Q 020169 156 EGAQLYFRGQRIWLTAMQDLMAKGMQN--ADQALLSGCSAGGLASILHCDEFRDL 208 (330)
Q Consensus 156 ~~~~l~frG~~n~~Avl~~L~~~gl~~--a~~VlLsG~SAGGlga~l~~d~vr~~ 208 (330)
..... ..-..-+.++|+..++ .++. ...+.|+|.|.||.=+..-+.+|.+.
T Consensus 143 ~~~~~-~~~a~d~~~~l~~f~~-~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~ 195 (462)
T PTZ00472 143 YDHNE-SEVSEDMYNFLQAFFG-SHEDLRANDLFVVGESYGGHYAPATAYRINMG 195 (462)
T ss_pred CCCCh-HHHHHHHHHHHHHHHH-hCccccCCCEEEEeecchhhhHHHHHHHHHhh
Confidence 01110 1112233344444443 2343 36799999999998877777777643
No 88
>PLN00413 triacylglycerol lipase
Probab=41.41 E-value=41 Score=35.38 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHh
Q 020169 170 TAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRD 207 (330)
Q Consensus 170 Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~ 207 (330)
..++++++ ..++. +|++||+|.||-=|.+.+..++.
T Consensus 272 ~~Lk~ll~-~~p~~-kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 272 RHLKEIFD-QNPTS-KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHH-HCCCC-eEEEEecCHHHHHHHHHHHHHHh
Confidence 34455544 34444 59999999999888888877664
No 89
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=40.65 E-value=47 Score=30.45 Aligned_cols=36 Identities=22% Similarity=0.210 Sum_probs=22.4
Q ss_pred cCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcc
Q 020169 183 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAG 222 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG 222 (330)
.++++|.|.|.||.=++.-+- ..|+.++-.++.++.
T Consensus 90 ~~~~~LvG~S~GG~va~~~a~----~~p~~v~~lvl~~~~ 125 (276)
T TIGR02240 90 YGQVNAIGVSWGGALAQQFAH----DYPERCKKLILAATA 125 (276)
T ss_pred cCceEEEEECHHHHHHHHHHH----HCHHHhhheEEeccC
Confidence 456999999999987664443 344334444444543
No 90
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=40.57 E-value=62 Score=32.38 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=24.4
Q ss_pred cCeEEEeeeChhhHHHHHhhHHHHhhCCCCce-EEEecCcccccc
Q 020169 183 ADQALLSGCSAGGLASILHCDEFRDLFPKTTK-VKCLSDAGMFLD 226 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~-V~~l~DSG~Fld 226 (330)
.++++|.|+|.||+-++..+-. .|..++ +.++.-+|+..+
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~----~p~~v~~lvl~~p~~~~~~ 215 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALK----HPEHVQHLILVGPAGFSSE 215 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHh----CchhhcEEEEECCccccCC
Confidence 3579999999999987765433 343232 334444554433
No 91
>PRK15231 fimbrial adhesin protein SefD; Provisional
Probab=40.39 E-value=40 Score=30.16 Aligned_cols=62 Identities=19% Similarity=0.232 Sum_probs=41.0
Q ss_pred CCCCceEEeccCCCCCCcEEEEeeccccccCchhhhcccCCCCCCchhhhccCCccccCCCCCCCCCCcc
Q 020169 65 GTLPGYHIHRGSGSGANSWLIHLEGGGWCNTIRNCVYRKTTRRGSAKFMEKQLPFTGILSNKAEENPDFF 134 (330)
Q Consensus 65 GSp~gyy~~~g~g~gs~kwlI~leGGG~C~d~~tC~~R~~t~lGSS~~~~~~~~~~GIls~~~~~NP~F~ 134 (330)
|-.|+.|+-.|.....+++-|=++|.||--|. .. .|=++.-.....|.=+.+.++..+||-|
T Consensus 78 gg~P~~YIvqGk~dsqh~LrVRlgGeGWqPd~---~g-----~Giv~~~~eqa~FDVv~DGnQ~V~pD~Y 139 (150)
T PRK15231 78 KNTPGAYIIRGQNNSAHKLRIRIGGEDWQPDN---SG-----IGMVSHSDFTNEFNIYYFGNGDIPVDTY 139 (150)
T ss_pred CCCccEEEEECCCCCcceEEEEecCCCccCCC---CC-----CceEeecccceeEEEEEeCCeecCCCeE
Confidence 55567777777766788999999999998776 22 2211111234456666777777777643
No 92
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=40.22 E-value=39 Score=35.23 Aligned_cols=36 Identities=8% Similarity=-0.024 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
.-+.++++|+..+...+ .+|.+.|.|.||.-+++-+
T Consensus 80 ~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a 115 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAA 115 (550)
T ss_pred hHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHh
Confidence 34678999997754444 6899999999997766543
No 93
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=39.56 E-value=22 Score=29.47 Aligned_cols=18 Identities=39% Similarity=0.525 Sum_probs=13.7
Q ss_pred eEEEeeeChhhHHHHHhh
Q 020169 185 QALLSGCSAGGLASILHC 202 (330)
Q Consensus 185 ~VlLsG~SAGGlga~l~~ 202 (330)
--+++|+||||+-+.+.+
T Consensus 28 ~d~i~GtS~Gal~a~~~~ 45 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLA 45 (204)
T ss_dssp -SEEEEECCHHHHHHHHH
T ss_pred ccEEEEcChhhhhHHHHH
Confidence 356999999999885543
No 94
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=39.16 E-value=32 Score=29.68 Aligned_cols=11 Identities=36% Similarity=0.724 Sum_probs=9.6
Q ss_pred EEEeeeChhhH
Q 020169 186 ALLSGCSAGGL 196 (330)
Q Consensus 186 VlLsG~SAGGl 196 (330)
+++.|.|||+.
T Consensus 70 ~vi~G~SAGA~ 80 (154)
T PF03575_consen 70 GVIIGTSAGAM 80 (154)
T ss_dssp SEEEEETHHHH
T ss_pred CEEEEEChHHh
Confidence 78999999993
No 95
>PLN02571 triacylglycerol lipase
Probab=38.75 E-value=61 Score=33.48 Aligned_cols=39 Identities=10% Similarity=0.211 Sum_probs=26.9
Q ss_pred HHHHHHH---HHhCCCCcC-eEEEeeeChhhHHHHHhhHHHHhh
Q 020169 169 LTAMQDL---MAKGMQNAD-QALLSGCSAGGLASILHCDEFRDL 208 (330)
Q Consensus 169 ~Avl~~L---~~~gl~~a~-~VlLsG~SAGGlga~l~~d~vr~~ 208 (330)
+.+++++ ++ .+++.+ .|+++|+|-||-=|.+.+.+++..
T Consensus 208 ~qvl~eV~~L~~-~y~~e~~sI~VTGHSLGGALAtLaA~dl~~~ 250 (413)
T PLN02571 208 DQVLNEVGRLVE-KYKDEEISITICGHSLGAALATLNAVDIVAN 250 (413)
T ss_pred HHHHHHHHHHHH-hcCcccccEEEeccchHHHHHHHHHHHHHHh
Confidence 3444444 43 344433 699999999998888888888753
No 96
>PLN02719 triacylglycerol lipase
Probab=38.49 E-value=57 Score=34.65 Aligned_cols=26 Identities=19% Similarity=0.359 Sum_probs=23.0
Q ss_pred cCeEEEeeeChhhHHHHHhhHHHHhh
Q 020169 183 ADQALLSGCSAGGLASILHCDEFRDL 208 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d~vr~~ 208 (330)
..+|++||+|-||-=|.+.+.++++.
T Consensus 297 ~~sItVTGHSLGGALAtLaA~Dl~~~ 322 (518)
T PLN02719 297 ELSITVTGHSLGGALAVLSAYDVAEM 322 (518)
T ss_pred cceEEEecCcHHHHHHHHHHHHHHHh
Confidence 35899999999999999999998875
No 97
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=38.47 E-value=38 Score=31.29 Aligned_cols=30 Identities=30% Similarity=0.476 Sum_probs=21.8
Q ss_pred HHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 170 TAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 170 Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
-|++.|.++|++ . -.++|.|||++-+.+.+
T Consensus 17 GvL~aL~e~gi~-~--~~i~GtSaGAi~aa~~a 46 (221)
T cd07210 17 GFLAALLEMGLE-P--SAISGTSAGALVGGLFA 46 (221)
T ss_pred HHHHHHHHcCCC-c--eEEEEeCHHHHHHHHHH
Confidence 467777776653 2 36999999999876655
No 98
>PLN02847 triacylglycerol lipase
Probab=38.22 E-value=71 Score=34.68 Aligned_cols=24 Identities=25% Similarity=0.243 Sum_probs=18.3
Q ss_pred CeEEEeeeChhhHHHHHhhHHHHh
Q 020169 184 DQALLSGCSAGGLASILHCDEFRD 207 (330)
Q Consensus 184 ~~VlLsG~SAGGlga~l~~d~vr~ 207 (330)
-+|+++|+|-||-=|.+-+-.+++
T Consensus 251 YkLVITGHSLGGGVAALLAilLRe 274 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILRE 274 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHhc
Confidence 379999999998665555667765
No 99
>PLN02209 serine carboxypeptidase
Probab=37.51 E-value=2.3e+02 Score=29.17 Aligned_cols=132 Identities=15% Similarity=0.172 Sum_probs=63.9
Q ss_pred CCCceEEeccC-CCCCCcEEEEeeccccccCchhhhcccCCCCCCchhhhccCCccccCCCCCCCCCCcc--cccEEEE-
Q 020169 66 TLPGYHIHRGS-GSGANSWLIHLEGGGWCNTIRNCVYRKTTRRGSAKFMEKQLPFTGILSNKAEENPDFF--NWNRVKL- 141 (330)
Q Consensus 66 Sp~gyy~~~g~-g~gs~kwlI~leGGG~C~d~~tC~~R~~t~lGSS~~~~~~~~~~GIls~~~~~NP~F~--nwN~VfV- 141 (330)
+.-.|++-+.. ....+-++|+|+||=-|-+..-... ..|--..-++ ...|-. ..-..||+-+ ..|+|||
T Consensus 52 ~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~----e~GP~~~~~~--~~~~~~-~~l~~n~~sW~~~anllfiD 124 (437)
T PLN02209 52 VQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFF----ENGPLALKNK--VYNGSV-PSLVSTTYSWTKTANIIFLD 124 (437)
T ss_pred eEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHH----hcCCceeccC--CCCCCc-ccceeCCCchhhcCcEEEec
Confidence 33445554432 2235689999999966655432222 1121110000 000000 1224577433 3577888
Q ss_pred -ecCCCCccCCCCCC-CCceEEEehHHHHHHHHHHHHHhCCCC--cCeEEEeeeChhhHHHHHhhHHHHhh
Q 020169 142 -RYCDGASFSGDSQN-EGAQLYFRGQRIWLTAMQDLMAKGMQN--ADQALLSGCSAGGLASILHCDEFRDL 208 (330)
Q Consensus 142 -pYCdGd~~~G~~~~-~~~~l~frG~~n~~Avl~~L~~~gl~~--a~~VlLsG~SAGGlga~l~~d~vr~~ 208 (330)
|-=+|=+++-+... ...+ -....+++.+..++.. +++ ...+.|+|.|-||.=+..-+.+|.+.
T Consensus 125 qPvGtGfSy~~~~~~~~~~~--~~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~ 191 (437)
T PLN02209 125 QPVGSGFSYSKTPIERTSDT--SEVKKIHEFLQKWLIK--HPQFLSNPFYVVGDSYSGMIVPALVHEISKG 191 (437)
T ss_pred CCCCCCccCCCCCCCccCCH--HHHHHHHHHHHHHHHh--CccccCCCEEEEecCcCceehHHHHHHHHhh
Confidence 44445554332211 1100 0123444444444432 332 34699999999997766666677553
No 100
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=37.50 E-value=36 Score=32.78 Aligned_cols=30 Identities=23% Similarity=0.416 Sum_probs=22.2
Q ss_pred HHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhH
Q 020169 171 AMQDLMAKGMQNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 171 vl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d 203 (330)
|++.|.+.| -+--+++|+|||++-+.+.+.
T Consensus 29 Vl~aL~e~g---i~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 29 VLKALEEAG---IPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHcC---CCccEEEecCHHHHHHHHHHc
Confidence 577777655 445789999999987666554
No 101
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=37.45 E-value=46 Score=29.11 Aligned_cols=29 Identities=24% Similarity=0.486 Sum_probs=20.2
Q ss_pred HHHHHHHHhCCCCcCeEEEeeeChhhHHHHHh
Q 020169 170 TAMQDLMAKGMQNADQALLSGCSAGGLASILH 201 (330)
Q Consensus 170 Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~ 201 (330)
-+++.|.++++. -=+++|.|||++-+.+.
T Consensus 17 Gvl~~L~e~g~~---~d~i~GtSaGAi~aa~~ 45 (175)
T cd07228 17 GVLRALEEEGIE---IDIIAGSSIGALVGALY 45 (175)
T ss_pred HHHHHHHHCCCC---eeEEEEeCHHHHHHHHH
Confidence 356777776653 35899999999954443
No 102
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=37.33 E-value=59 Score=31.48 Aligned_cols=34 Identities=18% Similarity=0.404 Sum_probs=24.8
Q ss_pred CCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecC
Q 020169 181 QNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSD 220 (330)
Q Consensus 181 ~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~D 220 (330)
.+.+.|+|+|. |+.+..+++++.+|+ +++.++.|
T Consensus 272 ~~~~~Iil~GG-----Ga~ll~~~l~~~f~~-~~i~~~~d 305 (320)
T TIGR03739 272 ESIQNIVLVGG-----GAFLFKKAVKAAFPK-HRIVEVDE 305 (320)
T ss_pred CcccEEEEeCC-----cHHHHHHHHHHHCCC-CeeEecCC
Confidence 35788999875 345668999999997 55655555
No 103
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=36.98 E-value=93 Score=30.60 Aligned_cols=60 Identities=27% Similarity=0.305 Sum_probs=36.3
Q ss_pred cEEEEecCCCCccCCCCCCCCceEEEehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCC
Q 020169 137 NRVKLRYCDGASFSGDSQNEGAQLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFP 210 (330)
Q Consensus 137 N~VfVpYCdGd~~~G~~~~~~~~l~frG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp 210 (330)
|.|+..++++. .+ .....=+|....+-|-+-|. ...+++|.|.|+|+||.-+. ++.+.++
T Consensus 90 ~~~~~~~~~~~--~~-----~~~~~~~~~ql~~~V~~~l~---~~ga~~v~LigHS~GG~~~r----y~~~~~~ 149 (336)
T COG1075 90 NGVYAFELSGG--DG-----TYSLAVRGEQLFAYVDEVLA---KTGAKKVNLIGHSMGGLDSR----YYLGVLG 149 (336)
T ss_pred ccccccccccc--CC-----CccccccHHHHHHHHHHHHh---hcCCCceEEEeecccchhhH----HHHhhcC
Confidence 34555666655 11 12334455555554444443 25679999999999998888 4444454
No 104
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=36.34 E-value=62 Score=33.45 Aligned_cols=34 Identities=12% Similarity=0.099 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 167 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
-+++.++.+.++ ...++|+|.|+|.||+=+....
T Consensus 147 ~Lk~lIe~~~~~--~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 147 GLKKKLETVYKA--SGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHHHHHHHH--cCCCCEEEEEECHhHHHHHHHH
Confidence 344555555442 3356899999999998877543
No 105
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=36.16 E-value=67 Score=27.75 Aligned_cols=21 Identities=19% Similarity=0.287 Sum_probs=16.7
Q ss_pred cCeEEEeeeChhhHHHHHhhH
Q 020169 183 ADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d 203 (330)
.++++|.|+|.||.-++..+.
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLAL 99 (257)
T ss_pred CCcEEEEEechhHHHHHHHHH
Confidence 467999999999987776543
No 106
>PLN02753 triacylglycerol lipase
Probab=36.12 E-value=65 Score=34.35 Aligned_cols=53 Identities=19% Similarity=0.336 Sum_probs=35.1
Q ss_pred cCeEEEeeeChhhHHHHHhhHHHHhh-CCC-----CceEEEecCcccccccCCCCchhhHHHHhh
Q 020169 183 ADQALLSGCSAGGLASILHCDEFRDL-FPK-----TTKVKCLSDAGMFLDAVDVSGGHTLRNMFA 241 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d~vr~~-lp~-----~a~V~~l~DSG~Fld~~~~~g~~~i~~~~~ 241 (330)
..+|++||+|-||-=|.+.+.+++.. ++. ...|.++.=++ +-.|+..+.++++
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGs------PRVGN~aFA~~~~ 369 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGG------PRVGNVRFKDRME 369 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCC------CCccCHHHHHHHH
Confidence 46899999999999999999888764 321 12344544332 3346666666554
No 107
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=35.96 E-value=97 Score=28.55 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=22.4
Q ss_pred CeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCc
Q 020169 184 DQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDA 221 (330)
Q Consensus 184 ~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DS 221 (330)
++++|.|.|.||.=++..+- ..|+.++-.++.++
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~----~~p~~v~~lili~~ 135 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAV----DAPELVRGVMLINI 135 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHH----hChhheeEEEEECC
Confidence 67999999999987765443 34543444444454
No 108
>PLN02934 triacylglycerol lipase
Probab=35.66 E-value=62 Score=34.38 Aligned_cols=39 Identities=21% Similarity=0.266 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHh
Q 020169 167 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRD 207 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~ 207 (330)
.++..++++++ ..++ .++++||+|-||-=|.+.+..++.
T Consensus 306 ~v~~~lk~ll~-~~p~-~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 306 AVRSKLKSLLK-EHKN-AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHH-HCCC-CeEEEeccccHHHHHHHHHHHHHH
Confidence 35556666665 3444 469999999999888887776654
No 109
>KOG3101 consensus Esterase D [General function prediction only]
Probab=35.64 E-value=15 Score=35.22 Aligned_cols=54 Identities=19% Similarity=0.273 Sum_probs=29.9
Q ss_pred CCCccCCCCCCCCceEEEehHHHHHHHHHHHHH----hCCC-CcCeEEEeeeChhhHHHHHh
Q 020169 145 DGASFSGDSQNEGAQLYFRGQRIWLTAMQDLMA----KGMQ-NADQALLSGCSAGGLASILH 201 (330)
Q Consensus 145 dGd~~~G~~~~~~~~l~frG~~n~~Avl~~L~~----~gl~-~a~~VlLsG~SAGGlga~l~ 201 (330)
.|+.|-=|++.+...-|+| ...-|.++|.+ ..++ ++.++-++|+|.||.||+.-
T Consensus 100 ~GAGFYvnAt~epw~~~yr---MYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~ 158 (283)
T KOG3101|consen 100 QGAGFYVNATQEPWAKHYR---MYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTI 158 (283)
T ss_pred CCceeEEecccchHhhhhh---HHHHHHHHHHHHhccccccccchhcceeccccCCCceEEE
Confidence 4444444444332333333 33444444433 2333 45668899999999998753
No 110
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=33.68 E-value=37 Score=31.04 Aligned_cols=47 Identities=15% Similarity=0.179 Sum_probs=30.6
Q ss_pred eEEEehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHH
Q 020169 159 QLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFR 206 (330)
Q Consensus 159 ~l~frG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr 206 (330)
.+.-.|.+.++++.+.+... -....++.+.|+|.||+=+-.-.-...
T Consensus 54 gI~~~g~rL~~eI~~~~~~~-~~~~~~IsfIgHSLGGli~r~al~~~~ 100 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDY-ESKIRKISFIGHSLGGLIARYALGLLH 100 (217)
T ss_pred hhHHHHHHHHHHHHHhcccc-ccccccceEEEecccHHHHHHHHHHhh
Confidence 34446777777777777542 122468999999999986544333333
No 111
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=33.64 E-value=48 Score=30.25 Aligned_cols=28 Identities=25% Similarity=0.532 Sum_probs=20.6
Q ss_pred HHHHHHHhCCCCcCeEEEeeeChhhHHHHHh
Q 020169 171 AMQDLMAKGMQNADQALLSGCSAGGLASILH 201 (330)
Q Consensus 171 vl~~L~~~gl~~a~~VlLsG~SAGGlga~l~ 201 (330)
|++.|.++|. .--+++|.|||++=+.+.
T Consensus 16 vl~aL~e~g~---~~d~i~GtS~GAl~aa~~ 43 (215)
T cd07209 16 VLKALAEAGI---EPDIISGTSIGAINGALI 43 (215)
T ss_pred HHHHHHHcCC---CCCEEEEECHHHHHHHHH
Confidence 6777777666 344899999999865544
No 112
>PLN02162 triacylglycerol lipase
Probab=33.52 E-value=70 Score=33.66 Aligned_cols=124 Identities=16% Similarity=0.100 Sum_probs=59.5
Q ss_pred CcEEEEeeccccccCchhhhcccCCCCCCc-hhhhcc--CCccccCCCCCCCCCCcccccEEEEecCC-CCccCCCCC--
Q 020169 81 NSWLIHLEGGGWCNTIRNCVYRKTTRRGSA-KFMEKQ--LPFTGILSNKAEENPDFFNWNRVKLRYCD-GASFSGDSQ-- 154 (330)
Q Consensus 81 ~kwlI~leGGG~C~d~~tC~~R~~t~lGSS-~~~~~~--~~~~GIls~~~~~NP~F~nwN~VfVpYCd-Gd~~~G~~~-- 154 (330)
+.|=.+|-|+=-||+...-........... ..-++. ..|-|--+.+. .| -..|.+...+++|+ |-+|.|-..
T Consensus 163 ~~w~m~~v~~y~~wn~~~~~~~TQafv~~d~~~d~~~IVVAFRGT~~~~~-~D-WiTDld~s~~~~~~~GkVH~GF~~A~ 240 (475)
T PLN02162 163 NTWKMDLVGNYDFYNAFQESKLTQAFVFKTSSTNPDLIVVSFRGTEPFEA-AD-WCTDLDLSWYELKNVGKVHAGFSRAL 240 (475)
T ss_pred HhcCccccchhhhhhhhhhhcccceEEEEeccCCCceEEEEEccCCCCcH-HH-HHhhcCcceecCCCCeeeeHHHHHHH
Confidence 678899999999998543221111100000 000000 12233221111 01 12344455666664 667777432
Q ss_pred ----C---CCceEEEehHHH---HHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhh
Q 020169 155 ----N---EGAQLYFRGQRI---WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDL 208 (330)
Q Consensus 155 ----~---~~~~l~frG~~n---~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~ 208 (330)
+ +....-.+.... +++.+++++.+ .++ .++++||+|-||-=|.+.+..++..
T Consensus 241 ~~~~~~~~p~~~~~~~~~~ay~~I~~~L~~lL~k-~p~-~kliVTGHSLGGALAtLaAa~L~~~ 302 (475)
T PLN02162 241 GLQKDGGWPKENISLLHQYAYYTIRQMLRDKLAR-NKN-LKYILTGHSLGGALAALFPAILAIH 302 (475)
T ss_pred HhhhcccccccccchhhhhhHHHHHHHHHHHHHh-CCC-ceEEEEecChHHHHHHHHHHHHHHc
Confidence 0 111111111222 33344444442 333 4699999999998888887777643
No 113
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=33.04 E-value=48 Score=32.40 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=23.6
Q ss_pred HHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhH
Q 020169 170 TAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 170 Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d 203 (330)
-||+.|.++|++ --+++|+|||++=+.+++-
T Consensus 32 GvL~aLee~gi~---~d~v~GtSaGAi~ga~ya~ 62 (306)
T cd07225 32 GVIKALEEAGIP---VDMVGGTSIGAFIGALYAE 62 (306)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHc
Confidence 467888887765 3689999999987766553
No 114
>PRK10985 putative hydrolase; Provisional
Probab=32.98 E-value=1.7e+02 Score=28.00 Aligned_cols=33 Identities=15% Similarity=-0.047 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHH
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASIL 200 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l 200 (330)
.-+.++++++.++ ++ .+++++.|.|.||.=+..
T Consensus 115 ~D~~~~i~~l~~~-~~-~~~~~~vG~S~GG~i~~~ 147 (324)
T PRK10985 115 EDARFFLRWLQRE-FG-HVPTAAVGYSLGGNMLAC 147 (324)
T ss_pred HHHHHHHHHHHHh-CC-CCCEEEEEecchHHHHHH
Confidence 4567788888763 33 356999999999964443
No 115
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=32.85 E-value=79 Score=31.27 Aligned_cols=82 Identities=17% Similarity=0.195 Sum_probs=50.9
Q ss_pred ccccEEEEecCCCCccCCCCCCCCceEEEehHHHHHH-------HHHHHHH-hCCCCcCeEEEeeeChhhHHHHHhhHHH
Q 020169 134 FNWNRVKLRYCDGASFSGDSQNEGAQLYFRGQRIWLT-------AMQDLMA-KGMQNADQALLSGCSAGGLASILHCDEF 205 (330)
Q Consensus 134 ~nwN~VfVpYCdGd~~~G~~~~~~~~l~frG~~n~~A-------vl~~L~~-~gl~~a~~VlLsG~SAGGlga~l~~d~v 205 (330)
.|.|++.|-+-.++. ..|.....|++. .|+.|.. .|+ ..++|-|.|+|-||--|-+-..++
T Consensus 103 ~d~NVI~VDWs~~a~----------~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~-~~~~ihlIGhSLGAHvaG~aG~~~ 171 (331)
T PF00151_consen 103 GDYNVIVVDWSRGAS----------NNYPQAVANTRLVGRQLAKFLSFLINNFGV-PPENIHLIGHSLGAHVAGFAGKYL 171 (331)
T ss_dssp S-EEEEEEE-HHHHS----------S-HHHHHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHT
T ss_pred CCceEEEEcchhhcc----------ccccchhhhHHHHHHHHHHHHHHHHhhcCC-ChhHEEEEeeccchhhhhhhhhhc
Confidence 367888888865542 124444444433 3555553 344 478899999999999888888888
Q ss_pred Hh--hCCCCceEEEecCcccccccCC
Q 020169 206 RD--LFPKTTKVKCLSDAGMFLDAVD 229 (330)
Q Consensus 206 r~--~lp~~a~V~~l~DSG~Fld~~~ 229 (330)
.. .++ ++.+|.=||+.++..+
T Consensus 172 ~~~~ki~---rItgLDPAgP~F~~~~ 194 (331)
T PF00151_consen 172 KGGGKIG---RITGLDPAGPLFENNP 194 (331)
T ss_dssp TT---SS---EEEEES-B-TTTTTS-
T ss_pred cCcceee---EEEecCcccccccCCC
Confidence 77 554 6999999999887654
No 116
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=32.06 E-value=1.1e+02 Score=30.15 Aligned_cols=27 Identities=15% Similarity=0.449 Sum_probs=21.2
Q ss_pred CCCcCeEEEeeeChhhHHHHHhhHHHHhhCCC
Q 020169 180 MQNADQALLSGCSAGGLASILHCDEFRDLFPK 211 (330)
Q Consensus 180 l~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~ 211 (330)
..+.++|+|+|.+|- +..++|++.+|+
T Consensus 289 ~~~~d~IiL~GGGA~-----ll~~~lk~~f~~ 315 (344)
T PRK13917 289 INSFDRVIVTGGGAN-----IFFDSLSHWYSD 315 (344)
T ss_pred cCCCCEEEEECCcHH-----HHHHHHHHHcCC
Confidence 456788999998763 356999999995
No 117
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=31.62 E-value=54 Score=30.62 Aligned_cols=31 Identities=23% Similarity=0.373 Sum_probs=22.1
Q ss_pred HHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHh
Q 020169 169 LTAMQDLMAKGMQNADQALLSGCSAGGLASILH 201 (330)
Q Consensus 169 ~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~ 201 (330)
--|++.|.++++. +==+++|.|||++=+...
T Consensus 14 ~Gvl~al~e~~~~--~fd~i~GtSaGAi~a~~~ 44 (266)
T cd07208 14 AGVLDAFLEAGIR--PFDLVIGVSAGALNAASY 44 (266)
T ss_pred HHHHHHHHHcCCC--CCCEEEEECHHHHhHHHH
Confidence 3467788777765 233799999999876653
No 118
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=31.50 E-value=1.3e+02 Score=27.35 Aligned_cols=49 Identities=16% Similarity=0.324 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHHHHh--CCCCcCeEEEeeeChhhHHH---HHhhHHHHhhCCCC
Q 020169 164 GQRIWLTAMQDLMAK--GMQNADQALLSGCSAGGLAS---ILHCDEFRDLFPKT 212 (330)
Q Consensus 164 G~~n~~Avl~~L~~~--gl~~a~~VlLsG~SAGGlga---~l~~d~vr~~lp~~ 212 (330)
|...++.+++.+.+. ..+..+-++|.-+-+||.|+ .+-++.+++.+|+.
T Consensus 103 ~~~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~ 156 (216)
T PF00091_consen 103 GEEALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKK 156 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTS
T ss_pred ccccccccccccchhhccccccccceecccccceeccccccccchhhhcccccc
Confidence 445778888887652 44889999999888888774 56688899999863
No 119
>PRK04940 hypothetical protein; Provisional
Probab=31.18 E-value=68 Score=29.38 Aligned_cols=23 Identities=22% Similarity=0.440 Sum_probs=18.8
Q ss_pred CeEEEeeeChhhHHHHHhhHHHHhhCC
Q 020169 184 DQALLSGCSAGGLASILHCDEFRDLFP 210 (330)
Q Consensus 184 ~~VlLsG~SAGGlga~l~~d~vr~~lp 210 (330)
+.++|.|+|-|| +++.++.+++.
T Consensus 60 ~~~~liGSSLGG----yyA~~La~~~g 82 (180)
T PRK04940 60 ERPLICGVGLGG----YWAERIGFLCG 82 (180)
T ss_pred CCcEEEEeChHH----HHHHHHHHHHC
Confidence 569999999999 66777777765
No 120
>PRK10279 hypothetical protein; Provisional
Probab=30.81 E-value=55 Score=32.01 Aligned_cols=29 Identities=24% Similarity=0.519 Sum_probs=22.6
Q ss_pred HHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 171 AMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 171 vl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
|++.|.+.|++ --+++|+|||++=+.+.+
T Consensus 23 VL~aL~E~gi~---~d~i~GtS~GAlvga~yA 51 (300)
T PRK10279 23 VINALKKVGIE---IDIVAGCSIGSLVGAAYA 51 (300)
T ss_pred HHHHHHHcCCC---cCEEEEEcHHHHHHHHHH
Confidence 67888877775 368999999998766655
No 121
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=30.72 E-value=55 Score=33.76 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHH
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASI 199 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~ 199 (330)
+-+++|||+|.+...=+.++|.+.|-|.||+-|+
T Consensus 243 ~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~Av 276 (411)
T PF06500_consen 243 RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAV 276 (411)
T ss_dssp HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHH
T ss_pred HHHHHHHHHHhcCCccChhheEEEEeccchHHHH
Confidence 5679999999764333677999999999997654
No 122
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=30.71 E-value=61 Score=31.96 Aligned_cols=29 Identities=24% Similarity=0.415 Sum_probs=21.6
Q ss_pred HHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 171 AMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 171 vl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
|++.|.++|+.. + +++|.|||++-+.+.+
T Consensus 87 vl~aL~e~~l~~-~--~i~GtSaGAi~aa~~~ 115 (298)
T cd07206 87 VVKALWEQDLLP-R--VISGSSAGAIVAALLG 115 (298)
T ss_pred HHHHHHHcCCCC-C--EEEEEcHHHHHHHHHH
Confidence 566676666642 2 6999999999887766
No 123
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=30.19 E-value=1.1e+02 Score=27.52 Aligned_cols=23 Identities=30% Similarity=0.420 Sum_probs=18.3
Q ss_pred CcCeEEEeeeChhhHHHHHhhHH
Q 020169 182 NADQALLSGCSAGGLASILHCDE 204 (330)
Q Consensus 182 ~a~~VlLsG~SAGGlga~l~~d~ 204 (330)
..+++.|.|+|.||.=++..+..
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALE 121 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHh
Confidence 34689999999999888876543
No 124
>PRK10749 lysophospholipase L2; Provisional
Probab=29.97 E-value=1.4e+02 Score=28.47 Aligned_cols=21 Identities=19% Similarity=0.123 Sum_probs=16.7
Q ss_pred cCeEEEeeeChhhHHHHHhhH
Q 020169 183 ADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d 203 (330)
.+++.|.|+|.||.-+...+.
T Consensus 130 ~~~~~l~GhSmGG~ia~~~a~ 150 (330)
T PRK10749 130 YRKRYALAHSMGGAILTLFLQ 150 (330)
T ss_pred CCCeEEEEEcHHHHHHHHHHH
Confidence 467999999999987765543
No 125
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=29.69 E-value=72 Score=27.58 Aligned_cols=33 Identities=18% Similarity=0.299 Sum_probs=24.1
Q ss_pred HHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 169 LTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 169 ~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
--|++.|.++++.+ .--.++|.|||++-+...+
T Consensus 14 ~gvl~~l~~~~~~~-~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 14 AGVLSALAERGLLD-CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHhCCcc-CCCEEEEEcHHHHHHHHHh
Confidence 34677777766542 3467899999999888777
No 126
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=28.88 E-value=74 Score=31.82 Aligned_cols=38 Identities=21% Similarity=0.329 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCC
Q 020169 169 LTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPK 211 (330)
Q Consensus 169 ~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~ 211 (330)
-+++++|.. ..+.+|+|.|+|.||-=+ -.-.....+|+
T Consensus 134 ~~~i~~~fg---e~~~~iilVGHSmGGaIa--v~~a~~k~lps 171 (343)
T KOG2564|consen 134 GAVIKELFG---ELPPQIILVGHSMGGAIA--VHTAASKTLPS 171 (343)
T ss_pred HHHHHHHhc---cCCCceEEEeccccchhh--hhhhhhhhchh
Confidence 366666653 456679999999998433 23344556776
No 127
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=28.76 E-value=81 Score=26.88 Aligned_cols=37 Identities=16% Similarity=0.192 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHH
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDE 204 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~ 204 (330)
.-+.+.++.++++ ++..+ +.+.|.|.||.=+...+..
T Consensus 28 ~~~~~~~~~~~~~-l~~~~-~~~vG~S~Gg~~~~~~a~~ 64 (230)
T PF00561_consen 28 DDLAADLEALREA-LGIKK-INLVGHSMGGMLALEYAAQ 64 (230)
T ss_dssp HHHHHHHHHHHHH-HTTSS-EEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hCCCC-eEEEEECCChHHHHHHHHH
Confidence 3445555555552 33333 9999999999877665544
No 128
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=28.71 E-value=69 Score=32.04 Aligned_cols=30 Identities=13% Similarity=0.369 Sum_probs=21.9
Q ss_pred HHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhH
Q 020169 171 AMQDLMAKGMQNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 171 vl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d 203 (330)
|++-|.++|+.. -+++|+|||++-+.+.+-
T Consensus 86 VlkaL~e~gl~p---~~i~GsSaGAivaa~~~~ 115 (323)
T cd07231 86 VVRTLVEHQLLP---RVIAGSSVGSIVCAIIAT 115 (323)
T ss_pred HHHHHHHcCCCC---CEEEEECHHHHHHHHHHc
Confidence 567777767643 259999999998776553
No 129
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=28.38 E-value=1.3e+02 Score=26.80 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhH
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d 203 (330)
..|.+.|+.-+. .. .+.++|.|+|.|.+.++.+..
T Consensus 40 ~~W~~~l~~~i~-~~--~~~~ilVaHSLGc~~~l~~l~ 74 (171)
T PF06821_consen 40 DEWVQALDQAID-AI--DEPTILVAHSLGCLTALRWLA 74 (171)
T ss_dssp HHHHHHHHHCCH-C---TTTEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hc--CCCeEEEEeCHHHHHHHHHHh
Confidence 445556555443 22 344999999999999998876
No 130
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=28.36 E-value=1e+02 Score=31.23 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=26.6
Q ss_pred HHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCC
Q 020169 169 LTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPK 211 (330)
Q Consensus 169 ~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~ 211 (330)
++.++||.++|+. .+-|+|-|.||. ++.-.....|+
T Consensus 163 ~~Ll~Wl~~~G~~---~~g~~G~SmGG~----~A~laa~~~p~ 198 (348)
T PF09752_consen 163 RALLHWLEREGYG---PLGLTGISMGGH----MAALAASNWPR 198 (348)
T ss_pred HHHHHHHHhcCCC---ceEEEEechhHh----hHHhhhhcCCC
Confidence 4568888876554 799999999995 45555666775
No 131
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=27.94 E-value=73 Score=30.77 Aligned_cols=34 Identities=21% Similarity=0.180 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 167 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
-+.+++++++++ ...+++.+.|.|.||.-++..+
T Consensus 121 ~~~~~v~~l~~~--~~~~~i~lvGhS~GG~i~~~~~ 154 (350)
T TIGR01836 121 YIDKCVDYICRT--SKLDQISLLGICQGGTFSLCYA 154 (350)
T ss_pred HHHHHHHHHHHH--hCCCcccEEEECHHHHHHHHHH
Confidence 367778888763 2457899999999998776543
No 132
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=27.62 E-value=1.5e+02 Score=28.61 Aligned_cols=37 Identities=19% Similarity=0.361 Sum_probs=24.2
Q ss_pred Ce-EEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccc
Q 020169 184 DQ-ALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMF 224 (330)
Q Consensus 184 ~~-VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~F 224 (330)
++ ++|.|.|.||.=++..+-. .|..++-.++.|+...
T Consensus 126 ~~~~~l~G~S~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 126 EQIAAVVGGSMGGMQALEWAID----YPERVRAIVVLATSAR 163 (351)
T ss_pred CCceEEEEECHHHHHHHHHHHH----ChHhhheEEEEccCCc
Confidence 45 9999999999777665543 3443444455566543
No 133
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=27.48 E-value=68 Score=30.50 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=20.7
Q ss_pred HHHHHHHhCCCCc-CeEEEeeeChhhHHHHHhh
Q 020169 171 AMQDLMAKGMQNA-DQALLSGCSAGGLASILHC 202 (330)
Q Consensus 171 vl~~L~~~gl~~a-~~VlLsG~SAGGlga~l~~ 202 (330)
|++-|++++..-- +--.++|.|||++-+...+
T Consensus 18 Vl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~a 50 (252)
T cd07221 18 VTRCLSERAPHLLRDARMFFGASAGALHCVTFL 50 (252)
T ss_pred HHHHHHHhCcchhccCCEEEEEcHHHHHHHHHH
Confidence 5666666442211 1246999999999877664
No 134
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=27.43 E-value=1.1e+02 Score=25.87 Aligned_cols=21 Identities=29% Similarity=0.403 Sum_probs=16.4
Q ss_pred cCeEEEeeeChhhHHHHHhhH
Q 020169 183 ADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d 203 (330)
.+++.|.|.|.||.-++..+.
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~ 98 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAA 98 (251)
T ss_pred CCceEEEEeCchHHHHHHHHH
Confidence 467999999999987765443
No 135
>PLN02578 hydrolase
Probab=26.59 E-value=2.4e+02 Score=27.23 Aligned_cols=39 Identities=28% Similarity=0.442 Sum_probs=23.8
Q ss_pred cCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecC-ccccc
Q 020169 183 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSD-AGMFL 225 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~D-SG~Fl 225 (330)
.++++|.|.|.||+=++..+.. .|..++-.++.| +|.+.
T Consensus 151 ~~~~~lvG~S~Gg~ia~~~A~~----~p~~v~~lvLv~~~~~~~ 190 (354)
T PLN02578 151 KEPAVLVGNSLGGFTALSTAVG----YPELVAGVALLNSAGQFG 190 (354)
T ss_pred cCCeEEEEECHHHHHHHHHHHh----ChHhcceEEEECCCcccc
Confidence 3679999999999866655444 444333333444 45443
No 136
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=26.08 E-value=1.5e+02 Score=25.94 Aligned_cols=20 Identities=30% Similarity=0.301 Sum_probs=15.9
Q ss_pred cCeEEEeeeChhhHHHHHhh
Q 020169 183 ADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~ 202 (330)
.++++|.|.|.||.=++..+
T Consensus 95 ~~~~~liG~S~Gg~ia~~~a 114 (288)
T TIGR01250 95 LDKFYLLGHSWGGMLAQEYA 114 (288)
T ss_pred CCcEEEEEeehHHHHHHHHH
Confidence 45699999999998766644
No 137
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=25.97 E-value=75 Score=29.11 Aligned_cols=26 Identities=23% Similarity=0.495 Sum_probs=17.9
Q ss_pred HHHHHHHHHHhCCCCcCeEEEeeeCh
Q 020169 168 WLTAMQDLMAKGMQNADQALLSGCSA 193 (330)
Q Consensus 168 ~~Avl~~L~~~gl~~a~~VlLsG~SA 193 (330)
+++++++|+++.--++.++++-|||-
T Consensus 3 ~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T PF04260_consen 3 LRQALEELLEQANLKPGQIFVVGCST 28 (172)
T ss_dssp HHHHHHHHHHHS---TT-EEEEEE-H
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeeeH
Confidence 67899999986666778899999994
No 138
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=25.90 E-value=77 Score=30.52 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhH
Q 020169 171 AMQDLMAKGMQNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 171 vl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d 203 (330)
|++.|.++|++ -=+++|.|||++=+.+++-
T Consensus 28 VL~aLeE~gi~---~d~v~GtSaGAiiga~ya~ 57 (269)
T cd07227 28 ILQALEEAGIP---IDAIGGTSIGSFVGGLYAR 57 (269)
T ss_pred HHHHHHHcCCC---ccEEEEECHHHHHHHHHHc
Confidence 67777776775 4589999999987766654
No 139
>PRK11071 esterase YqiA; Provisional
Probab=25.71 E-value=1.4e+02 Score=26.57 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 167 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
.+.+.++++++. ++ .+++++.|+|.||.=++.-+
T Consensus 46 ~~~~~l~~l~~~-~~-~~~~~lvG~S~Gg~~a~~~a 79 (190)
T PRK11071 46 DAAELLESLVLE-HG-GDPLGLVGSSLGGYYATWLS 79 (190)
T ss_pred HHHHHHHHHHHH-cC-CCCeEEEEECHHHHHHHHHH
Confidence 355566666652 22 35799999999998776543
No 140
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=25.28 E-value=40 Score=27.75 Aligned_cols=15 Identities=13% Similarity=0.293 Sum_probs=8.3
Q ss_pred CCchhhHHHHHHHHh
Q 020169 2 KPMLYFCFVIVLIRS 16 (330)
Q Consensus 2 ~~~l~~~~~~~~~~~ 16 (330)
|++|+|.++++++++
T Consensus 4 K~~llL~l~LA~lLl 18 (95)
T PF07172_consen 4 KAFLLLGLLLAALLL 18 (95)
T ss_pred hHHHHHHHHHHHHHH
Confidence 555666665554444
No 141
>PLN02761 lipase class 3 family protein
Probab=25.25 E-value=1.4e+02 Score=31.89 Aligned_cols=54 Identities=13% Similarity=0.202 Sum_probs=34.2
Q ss_pred cCeEEEeeeChhhHHHHHhhHHHHhh-CC------CCceEEEecCcccccccCCCCchhhHHHHhhh
Q 020169 183 ADQALLSGCSAGGLASILHCDEFRDL-FP------KTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAG 242 (330)
Q Consensus 183 a~~VlLsG~SAGGlga~l~~d~vr~~-lp------~~a~V~~l~DSG~Fld~~~~~g~~~i~~~~~~ 242 (330)
..+|+++|+|-||-=|.+.+.+|+.. ++ ....|.+++=++ +--|+..+.++++.
T Consensus 293 ~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGs------PRVGN~~FA~~~d~ 353 (527)
T PLN02761 293 EISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSG------PRVGNLRFKERCDE 353 (527)
T ss_pred CceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCC------CCcCCHHHHHHHHh
Confidence 34799999999998888888888764 22 112355544333 23455666665544
No 142
>CHL00024 psbI photosystem II protein I
Probab=25.23 E-value=40 Score=23.30 Aligned_cols=12 Identities=50% Similarity=0.756 Sum_probs=11.2
Q ss_pred cccCCCCCCCCC
Q 020169 120 TGILSNKAEENP 131 (330)
Q Consensus 120 ~GIls~~~~~NP 131 (330)
-|.+|+|+..||
T Consensus 21 fGFlsnDp~RnP 32 (36)
T CHL00024 21 FGFLSNDPGRNP 32 (36)
T ss_pred ccccCCCCCCCC
Confidence 599999999999
No 143
>PRK02655 psbI photosystem II reaction center I protein I; Provisional
Probab=25.06 E-value=41 Score=23.49 Aligned_cols=13 Identities=38% Similarity=0.644 Sum_probs=11.6
Q ss_pred cccCCCCCCCCCC
Q 020169 120 TGILSNKAEENPD 132 (330)
Q Consensus 120 ~GIls~~~~~NP~ 132 (330)
-|.||+|+..||-
T Consensus 21 FGflsnDP~RnP~ 33 (38)
T PRK02655 21 FGFLSSDPTRNPG 33 (38)
T ss_pred cccCCCCCCCCCC
Confidence 5899999999993
No 144
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=24.92 E-value=79 Score=32.30 Aligned_cols=31 Identities=26% Similarity=0.563 Sum_probs=23.0
Q ss_pred HHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhH
Q 020169 170 TAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 170 Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d 203 (330)
-|++-|.++|+. ++ +++|+|||++-+.+.+-
T Consensus 84 GVlkaL~e~gll-p~--iI~GtSAGAivaalla~ 114 (407)
T cd07232 84 GVVKALLDADLL-PN--VISGTSGGSLVAALLCT 114 (407)
T ss_pred HHHHHHHhCCCC-CC--EEEEECHHHHHHHHHHc
Confidence 467888887754 22 59999999998776654
No 145
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=24.17 E-value=88 Score=32.04 Aligned_cols=30 Identities=20% Similarity=0.405 Sum_probs=21.4
Q ss_pred HHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhH
Q 020169 171 AMQDLMAKGMQNADQALLSGCSAGGLASILHCD 203 (330)
Q Consensus 171 vl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d 203 (330)
|++-|.++|+..- +++|+|||++-+.+.+.
T Consensus 101 v~kaL~e~gl~p~---~i~GtS~Gaivaa~~a~ 130 (391)
T cd07229 101 VVKALWLRGLLPR---IITGTATGALIAALVGV 130 (391)
T ss_pred HHHHHHHcCCCCc---eEEEecHHHHHHHHHHc
Confidence 5677777665432 59999999987666554
No 146
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.13 E-value=48 Score=30.99 Aligned_cols=14 Identities=36% Similarity=0.824 Sum_probs=11.2
Q ss_pred eEEEeeeChhhHHH
Q 020169 185 QALLSGCSAGGLAS 198 (330)
Q Consensus 185 ~VlLsG~SAGGlga 198 (330)
.-+++|||.||+=|
T Consensus 102 s~~~sgcsmGayhA 115 (227)
T COG4947 102 STIVSGCSMGAYHA 115 (227)
T ss_pred Cccccccchhhhhh
Confidence 37899999999544
No 147
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=24.07 E-value=2.3e+02 Score=26.07 Aligned_cols=42 Identities=10% Similarity=0.086 Sum_probs=26.6
Q ss_pred CCccCCCCCCCCceEEEehHHHHHHHHHHHHHhC--CCCcCeEEEeeeChhh
Q 020169 146 GASFSGDSQNEGAQLYFRGQRIWLTAMQDLMAKG--MQNADQALLSGCSAGG 195 (330)
Q Consensus 146 Gd~~~G~~~~~~~~l~frG~~n~~Avl~~L~~~g--l~~a~~VlLsG~SAGG 195 (330)
+|+|.|... .+...++..+++|.... -.+++.|+++|...-.
T Consensus 5 SDlHl~~~~--------~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~ 48 (243)
T cd07386 5 SDVHVGSKT--------FLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDG 48 (243)
T ss_pred cccCCCchh--------hhHHHHHHHHHHHcCCcccccCccEEEEeCCcccc
Confidence 466665432 23456777777775311 1257899999988765
No 148
>PRK03592 haloalkane dehalogenase; Provisional
Probab=23.78 E-value=2.4e+02 Score=25.94 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=22.7
Q ss_pred CeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCc
Q 020169 184 DQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDA 221 (330)
Q Consensus 184 ~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DS 221 (330)
++++|.|.|.||.=++..+ ...|+.++-.++.++
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a----~~~p~~v~~lil~~~ 126 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWA----ARHPDRVRGIAFMEA 126 (295)
T ss_pred CCeEEEEECHHHHHHHHHH----HhChhheeEEEEECC
Confidence 6799999999998776443 445654444444454
No 149
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=23.25 E-value=1.7e+02 Score=29.92 Aligned_cols=54 Identities=19% Similarity=0.139 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcccccccC
Q 020169 168 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAV 228 (330)
Q Consensus 168 ~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG~Fld~~ 228 (330)
++.+=+|-...|+. +.+|.|+|-||+=+..++- .+|+.++-.+|+|..=|-..+
T Consensus 147 vesiE~WR~~~~L~---KmilvGHSfGGYLaa~YAl----KyPerV~kLiLvsP~Gf~~~~ 200 (365)
T KOG4409|consen 147 VESIEQWRKKMGLE---KMILVGHSFGGYLAAKYAL----KYPERVEKLILVSPWGFPEKP 200 (365)
T ss_pred HHHHHHHHHHcCCc---ceeEeeccchHHHHHHHHH----hChHhhceEEEecccccccCC
Confidence 44455555544554 7999999999976554432 367777777888864444433
No 150
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=23.21 E-value=1.6e+02 Score=26.25 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=29.0
Q ss_pred ehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHH
Q 020169 163 RGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDE 204 (330)
Q Consensus 163 rG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~ 204 (330)
.|..++...|++..++ -++ .+++|+|.|-|+.-+-.....
T Consensus 62 ~G~~~~~~~i~~~~~~-CP~-~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 62 AGVANLVRLIEEYAAR-CPN-TKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp HHHHHHHHHHHHHHHH-STT-SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-CCC-CCEEEEecccccHHHHHHHHh
Confidence 4677888888887663 344 479999999999776554433
No 151
>PRK03204 haloalkane dehalogenase; Provisional
Probab=23.18 E-value=1.8e+02 Score=27.16 Aligned_cols=50 Identities=14% Similarity=0.106 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcc
Q 020169 167 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAG 222 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG 222 (330)
-+.+.+++++++ + +.++++|.|+|.||.=++..+ ...|..++-.++.+++
T Consensus 86 ~~~~~~~~~~~~-~-~~~~~~lvG~S~Gg~va~~~a----~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 86 EHARVIGEFVDH-L-GLDRYLSMGQDWGGPISMAVA----VERADRVRGVVLGNTW 135 (286)
T ss_pred HHHHHHHHHHHH-h-CCCCEEEEEECccHHHHHHHH----HhChhheeEEEEECcc
Confidence 345555555552 2 336799999999997554433 2344433333444544
No 152
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=23.16 E-value=2e+02 Score=26.86 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHh
Q 020169 168 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRD 207 (330)
Q Consensus 168 ~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~ 207 (330)
..+-++.++. ..++ .++|+|+|=||.=|.+-+-.+.+
T Consensus 71 A~~yl~~~~~-~~~~--~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 71 ALAYLKKIAK-KYPG--KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHH-hCCC--CEEEEEechhhHHHHHHHHHccH
Confidence 3334444443 2333 59999999999766555544433
No 153
>PLN02872 triacylglycerol lipase
Probab=23.08 E-value=1e+02 Score=31.20 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=26.1
Q ss_pred ehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHH
Q 020169 163 RGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASI 199 (330)
Q Consensus 163 rG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~ 199 (330)
.+..-+.|+++++++. . .+++.+.|+|.||.-++
T Consensus 142 ~a~~Dl~a~id~i~~~--~-~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 142 LALYDLAEMIHYVYSI--T-NSKIFIVGHSQGTIMSL 175 (395)
T ss_pred HHHHHHHHHHHHHHhc--c-CCceEEEEECHHHHHHH
Confidence 4445688999998753 2 36899999999998765
No 154
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=22.99 E-value=73 Score=30.94 Aligned_cols=68 Identities=21% Similarity=0.180 Sum_probs=41.1
Q ss_pred cccEEEEecCCCCccCCCCCCCCceEEEehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhh
Q 020169 135 NWNRVKLRYCDGASFSGDSQNEGAQLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDL 208 (330)
Q Consensus 135 nwN~VfVpYCdGd~~~G~~~~~~~~l~frG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~ 208 (330)
+-|+..|-|=-=.-=.|..+.+ .++ .--++++|+|..+-.-+-++++|.|-|-||--|+.-+...+++
T Consensus 106 ~mnv~ivsYRGYG~S~GspsE~--GL~----lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r 173 (300)
T KOG4391|consen 106 KMNVLIVSYRGYGKSEGSPSEE--GLK----LDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR 173 (300)
T ss_pred CceEEEEEeeccccCCCCcccc--cee----ccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh
Confidence 3566666663322222332222 232 2368999999986555667899999999996555544444443
No 155
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=22.97 E-value=1.3e+02 Score=29.00 Aligned_cols=17 Identities=29% Similarity=0.388 Sum_probs=14.2
Q ss_pred CeEEEeeeChhhHHHHH
Q 020169 184 DQALLSGCSAGGLASIL 200 (330)
Q Consensus 184 ~~VlLsG~SAGGlga~l 200 (330)
.+++|.|.|.||.-++.
T Consensus 162 ~~~~LvGhSmGG~val~ 178 (349)
T PLN02385 162 LPSFLFGQSMGGAVALK 178 (349)
T ss_pred CCEEEEEeccchHHHHH
Confidence 46999999999987654
No 156
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=22.88 E-value=1.2e+02 Score=28.42 Aligned_cols=66 Identities=15% Similarity=0.106 Sum_probs=38.5
Q ss_pred cccccEEEEecCCCCccCCCC-C--CCCceEEEehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHH
Q 020169 133 FFNWNRVKLRYCDGASFSGDS-Q--NEGAQLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASI 199 (330)
Q Consensus 133 F~nwN~VfVpYCdGd~~~G~~-~--~~~~~l~frG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~ 199 (330)
|..--.||-||=-......-. . .......=-++.=+++++++-++ +..+-.-+||+|+|-|+.-..
T Consensus 42 F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~-~~n~GRPfILaGHSQGs~~l~ 110 (207)
T PF11288_consen 42 FNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLA-NYNNGRPFILAGHSQGSMHLL 110 (207)
T ss_pred hhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHH-hcCCCCCEEEEEeChHHHHHH
Confidence 555666666664444322222 1 11122222345667777777776 566667899999999995443
No 157
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.81 E-value=1.3e+02 Score=28.75 Aligned_cols=34 Identities=24% Similarity=0.240 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHhCCCCcC--eEEEeeeChhhHHHHHh
Q 020169 167 IWLTAMQDLMAKGMQNAD--QALLSGCSAGGLASILH 201 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~--~VlLsG~SAGGlga~l~ 201 (330)
+--.+|+.|.+++ ++.. -=+++|.||||+-|...
T Consensus 16 ~~~~vL~~Le~~~-~~~~~~fD~i~GTSaGaiia~~l 51 (288)
T cd07213 16 VQLVLLKRLAEEF-PSFLDQIDLFAGTSAGSLIALGL 51 (288)
T ss_pred HHHHHHHHHHHhC-cccccceeEEEEeCHHHHHHHHH
Confidence 3445677777653 2211 23799999999876554
No 158
>COG5294 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.70 E-value=2.8e+02 Score=23.79 Aligned_cols=29 Identities=17% Similarity=0.154 Sum_probs=16.0
Q ss_pred CCCccCCCCCCce-EEeccCC-CCCCcEEEEe
Q 020169 58 KGAVCLDGTLPGY-HIHRGSG-SGANSWLIHL 87 (330)
Q Consensus 58 ~gA~ClDGSp~gy-y~~~g~g-~gs~kwlI~l 87 (330)
..-.-.|||| +| |=-.++. .|.++-+-|.
T Consensus 43 ~~~~t~~~~~-~y~y~i~ayn~~Gkkk~v~f~ 73 (113)
T COG5294 43 VEEDTQDGSP-GYEYTITAYNKNGKKKEVKFT 73 (113)
T ss_pred cccccccCCc-cceeeehhhccCCcEEEEEEE
Confidence 3445668999 88 4445544 3444444443
No 159
>PRK06489 hypothetical protein; Provisional
Probab=22.26 E-value=1.9e+02 Score=28.07 Aligned_cols=34 Identities=18% Similarity=0.313 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhCCCCcCeE-EEeeeChhhHHHHHhh
Q 020169 167 IWLTAMQDLMAKGMQNADQA-LLSGCSAGGLASILHC 202 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~V-lLsG~SAGGlga~l~~ 202 (330)
.++.+++.+++ .++ .+++ +|.|.|.||.=++..+
T Consensus 138 ~a~~~~~~l~~-~lg-i~~~~~lvG~SmGG~vAl~~A 172 (360)
T PRK06489 138 MVEAQYRLVTE-GLG-VKHLRLILGTSMGGMHAWMWG 172 (360)
T ss_pred HHHHHHHHHHH-hcC-CCceeEEEEECHHHHHHHHHH
Confidence 34444444444 222 2445 6999999997766544
No 160
>PF04631 Baculo_44: Baculovirus hypothetical protein; InterPro: IPR006725 This family includes several hypothetical baculoviral proteins, with predicted molecular weights of approximately 44 kDa.
Probab=22.20 E-value=49 Score=33.61 Aligned_cols=50 Identities=20% Similarity=0.434 Sum_probs=33.7
Q ss_pred CCccCCCCCCceEEeccCCCCCCcEEE---EeeccccccCc---hhhhcccCCCCCCchhh
Q 020169 59 GAVCLDGTLPGYHIHRGSGSGANSWLI---HLEGGGWCNTI---RNCVYRKTTRRGSAKFM 113 (330)
Q Consensus 59 gA~ClDGSp~gyy~~~g~g~gs~kwlI---~leGGG~C~d~---~tC~~R~~t~lGSS~~~ 113 (330)
.++|.|.|...||+.+. +|++| .|.-||||... .+|.......+-|.+.|
T Consensus 94 t~iC~n~sA~yf~V~~~-----dkfvvng~~L~~GgYCttnsvPrnCNreTSvvl~slNqW 149 (371)
T PF04631_consen 94 TSICDNPSAVYFFVGEH-----DKFVVNGQRLSPGGYCTTNSVPRNCNRETSVVLHSLNQW 149 (371)
T ss_pred hhhcCCCcceEEEecCC-----ceEEEcCcCccCCccccCCCcccccCccceEEEEcCCcE
Confidence 46788999877777664 57777 48899999753 47983322234555555
No 161
>COG5023 Tubulin [Cytoskeleton]
Probab=22.16 E-value=1.6e+02 Score=30.53 Aligned_cols=53 Identities=26% Similarity=0.365 Sum_probs=36.9
Q ss_pred EEEehHHHHHHHHHHHHHh--CCCCcCeEEEeeeChhhHHH---HHhhHHHHhhCCCC
Q 020169 160 LYFRGQRIWLTAMQDLMAK--GMQNADQALLSGCSAGGLAS---ILHCDEFRDLFPKT 212 (330)
Q Consensus 160 l~frG~~n~~Avl~~L~~~--gl~~a~~VlLsG~SAGGlga---~l~~d~vr~~lp~~ 212 (330)
-|=.|.+|++.|||.+.+. +-+.-+-.+|+=+=|||.|+ -+-.+++++.+|+.
T Consensus 105 hYtvG~e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK 162 (443)
T COG5023 105 HYTVGKEIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKK 162 (443)
T ss_pred ccchhHHHHHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHHhcchh
Confidence 3567899999999988652 44555556666666666553 23468899999974
No 162
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=21.76 E-value=70 Score=27.83 Aligned_cols=51 Identities=8% Similarity=-0.006 Sum_probs=31.6
Q ss_pred cCCCCccCCCCCCCC--ceEEEehHHHHHHHHHHHHHhCCCCcCeEEEeeeChh
Q 020169 143 YCDGASFSGDSQNEG--AQLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAG 194 (330)
Q Consensus 143 YCdGd~~~G~~~~~~--~~l~frG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAG 194 (330)
|+-+|.|.|...... ..-+-+-....+++++.+.+ .+++++.|+++|--..
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~d~vi~~GDl~~ 54 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNE-TVGPDDTVYHLGDFSF 54 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhh-hcCCCCEEEEeCCCCC
Confidence 778999999753110 00001112345667777765 5788999999997554
No 163
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=21.70 E-value=2.4e+02 Score=27.69 Aligned_cols=50 Identities=18% Similarity=0.185 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecC
Q 020169 164 GQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSD 220 (330)
Q Consensus 164 G~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~D 220 (330)
-..-++.+.+...+ +... .+.|.|.|.||+=++. ++..+|..++..++-|
T Consensus 111 ~~~~v~~i~~~~~~--~~~~-~~~lvghS~Gg~va~~----~Aa~~P~~V~~lv~~~ 160 (326)
T KOG1454|consen 111 LRELVELIRRFVKE--VFVE-PVSLVGHSLGGIVALK----AAAYYPETVDSLVLLD 160 (326)
T ss_pred hhHHHHHHHHHHHh--hcCc-ceEEEEeCcHHHHHHH----HHHhCcccccceeeec
Confidence 33444444444443 2223 3999999999976665 5555777655555334
No 164
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=21.67 E-value=1.4e+02 Score=28.72 Aligned_cols=35 Identities=14% Similarity=0.235 Sum_probs=21.8
Q ss_pred CeEEEeeeChhhHHHHHhhHHHHhhCCCCceEEEecCcc
Q 020169 184 DQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAG 222 (330)
Q Consensus 184 ~~VlLsG~SAGGlga~l~~d~vr~~lp~~a~V~~l~DSG 222 (330)
+.+.|.|.|.||.=++..+- ..|..++-.++.|+.
T Consensus 138 ~~~~lvG~SmGG~vA~~~A~----~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 138 RLHAFVGYSYGALVGLQFAS----RHPARVRTLVVVSGA 172 (343)
T ss_pred cceEEEEECHHHHHHHHHHH----HChHhhheEEEECcc
Confidence 33579999999976665443 345444444555654
No 165
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=21.64 E-value=1.3e+02 Score=30.27 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHH
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEF 205 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~v 205 (330)
..+++.|+++..+ +.++|+|.|+|.||+=+..-....
T Consensus 104 ~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 104 TKLKQLIEEAYKK---NGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHh---cCCcEEEEEeCCCchHHHHHHHhc
Confidence 4466677776652 277899999999998776655554
No 166
>smart00087 PTH Parathyroid hormone.
Probab=21.55 E-value=99 Score=21.43 Aligned_cols=22 Identities=18% Similarity=0.448 Sum_probs=19.0
Q ss_pred hHHHHHHHhHhhhhhhHHHHHH
Q 020169 293 LDYIHSLLSFFSASSLKIWLQI 314 (330)
Q Consensus 293 w~yi~~~~~~~~~~~~~~~~~~ 314 (330)
=+++|++|+......-.+|||-
T Consensus 7 ~QLMHd~g~~~q~~~R~~WLq~ 28 (36)
T smart00087 7 IQLMHNLGKHLQSLERREWLRK 28 (36)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999988888999984
No 167
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=21.30 E-value=1.2e+02 Score=30.16 Aligned_cols=57 Identities=21% Similarity=0.306 Sum_probs=39.5
Q ss_pred eEEEehHHHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhCCC-CceEEEecCccc
Q 020169 159 QLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPK-TTKVKCLSDAGM 223 (330)
Q Consensus 159 ~l~frG~~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~lp~-~a~V~~l~DSG~ 223 (330)
.++.....-.-+...+|.++ +=++.|.|.|+ ++.-+-.+++.++. ..-|.+++|+|.
T Consensus 238 ~v~~V~d~~A~~~~r~La~~------eGilvG~SsGA--~~~aa~~~a~~~~~g~~IVti~pD~G~ 295 (300)
T COG0031 238 EVIRVSDEEAIATARRLARE------EGLLVGISSGA--ALAAALKLAKELPAGKTIVTILPDSGE 295 (300)
T ss_pred eEEEECHHHHHHHHHHHHHH------hCeeecccHHH--HHHHHHHHHHhcCCCCeEEEEECCCcc
Confidence 45555565566666777652 45788888886 45556678888874 455889999984
No 168
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=21.29 E-value=1.2e+02 Score=31.94 Aligned_cols=84 Identities=21% Similarity=0.183 Sum_probs=48.4
Q ss_pred CccccCCCCCCCCCCcccccEEEEe--cCCCCccCCCCCCCCceEEEehHHHHHHHHHHH-------HHhCCCCcCeEEE
Q 020169 118 PFTGILSNKAEENPDFFNWNRVKLR--YCDGASFSGDSQNEGAQLYFRGQRIWLTAMQDL-------MAKGMQNADQALL 188 (330)
Q Consensus 118 ~~~GIls~~~~~NP~F~nwN~VfVp--YCdGd~~~G~~~~~~~~l~frG~~n~~Avl~~L-------~~~gl~~a~~VlL 188 (330)
..+|.+=+.. |. .+.-.||+- |=--..=-|++. -+...|-|+.+.+.+|++. ++.--.++..||.
T Consensus 98 ~ntGFm~D~A---p~-~~AllVFaEHRyYGeS~PFG~~s--~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIa 171 (492)
T KOG2183|consen 98 NNTGFMWDLA---PE-LKALLVFAEHRYYGESLPFGSQS--YKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIA 171 (492)
T ss_pred hccchHHhhh---Hh-hCceEEEeehhccccCCCCcchh--ccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEE
Confidence 3456654333 22 356777762 211111113322 2345677888888877763 3222336778999
Q ss_pred eeeChhhHHHHHhhHHHHhhCCC
Q 020169 189 SGCSAGGLASILHCDEFRDLFPK 211 (330)
Q Consensus 189 sG~SAGGlga~l~~d~vr~~lp~ 211 (330)
.|.|-|| .-+.++|-.+|.
T Consensus 172 fGGSYGG----MLaAWfRlKYPH 190 (492)
T KOG2183|consen 172 FGGSYGG----MLAAWFRLKYPH 190 (492)
T ss_pred ecCchhh----HHHHHHHhcChh
Confidence 9999999 455677777764
No 169
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=21.22 E-value=2.6e+02 Score=26.86 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHh-C-------CCCcCeEEEeeeChhhHH
Q 020169 166 RIWLTAMQDLMAK-G-------MQNADQALLSGCSAGGLA 197 (330)
Q Consensus 166 ~n~~Avl~~L~~~-g-------l~~a~~VlLsG~SAGGlg 197 (330)
..++-.+|||... | -.+-.++|++|.|-.+.+
T Consensus 18 ~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~ 57 (257)
T cd07387 18 LSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKST 57 (257)
T ss_pred HHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccc
Confidence 4677788888631 1 123357999999999865
No 170
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=21.14 E-value=1.5e+02 Score=29.42 Aligned_cols=67 Identities=18% Similarity=0.233 Sum_probs=38.5
Q ss_pred cccEEEEecCCCCccCCCCCCCCceEEEehHHHHHHHHHHHHHh--CCCCcCeEEEeeeChhhHHHHHhhHHHHh
Q 020169 135 NWNRVKLRYCDGASFSGDSQNEGAQLYFRGQRIWLTAMQDLMAK--GMQNADQALLSGCSAGGLASILHCDEFRD 207 (330)
Q Consensus 135 nwN~VfVpYCdGd~~~G~~~~~~~~l~frG~~n~~Avl~~L~~~--gl~~a~~VlLsG~SAGGlga~l~~d~vr~ 207 (330)
+|..|.+.-.+ +|.|-.... | =|=..-+.+.+++|... |..+.++|+|.|+|-|..-++.+...-..
T Consensus 63 ~wsl~q~~LsS--Sy~G~G~~S---L-~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~ 131 (303)
T PF08538_consen 63 GWSLFQVQLSS--SYSGWGTSS---L-DRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNP 131 (303)
T ss_dssp T-EEEEE--GG--GBTTS-S-----H-HHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT
T ss_pred CeEEEEEEecC--ccCCcCcch---h-hhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCc
Confidence 69999888755 445543210 0 01134578889999874 44578899999999999988876665553
No 171
>PRK13690 hypothetical protein; Provisional
Probab=20.47 E-value=1.3e+02 Score=27.83 Aligned_cols=28 Identities=18% Similarity=0.385 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeCh
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSA 193 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SA 193 (330)
.-++.++++|++..--++.++++.|||-
T Consensus 8 ~~~~~~~~El~~~a~l~~g~i~VvGcST 35 (184)
T PRK13690 8 KQTRQILEELLEQANLKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 4578889999886555677899999984
No 172
>PLN02511 hydrolase
Probab=20.46 E-value=1.4e+02 Score=29.75 Aligned_cols=35 Identities=9% Similarity=-0.000 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhh
Q 020169 166 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 202 (330)
Q Consensus 166 ~n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~ 202 (330)
.-+++++++|.. .+++ .++++.|.|.||.=++..+
T Consensus 157 ~Dl~~~i~~l~~-~~~~-~~~~lvG~SlGg~i~~~yl 191 (388)
T PLN02511 157 GDLRQVVDHVAG-RYPS-ANLYAAGWSLGANILVNYL 191 (388)
T ss_pred HHHHHHHHHHHH-HCCC-CCEEEEEechhHHHHHHHH
Confidence 347888999876 3444 4699999999997665544
No 173
>COG4099 Predicted peptidase [General function prediction only]
Probab=20.45 E-value=1.2e+02 Score=30.69 Aligned_cols=43 Identities=19% Similarity=0.265 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHhCCCCcCeEEEeeeChhhHHHHHhhHHHHhhC
Q 020169 167 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLF 209 (330)
Q Consensus 167 n~~Avl~~L~~~gl~~a~~VlLsG~SAGGlga~l~~d~vr~~l 209 (330)
-++.+.+.|.+.---+-.++.++|-|-||+|++.-...+-+.|
T Consensus 252 ~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfF 294 (387)
T COG4099 252 KIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFF 294 (387)
T ss_pred HHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhh
Confidence 3555555666531124568999999999999987665444433
No 174
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=20.45 E-value=65 Score=31.65 Aligned_cols=43 Identities=19% Similarity=0.242 Sum_probs=28.6
Q ss_pred CceEEEehH-HHHHHHHHHHHHhCCC--CcCeEEEeeeChhhHHHHHh
Q 020169 157 GAQLYFRGQ-RIWLTAMQDLMAKGMQ--NADQALLSGCSAGGLASILH 201 (330)
Q Consensus 157 ~~~l~frG~-~n~~Avl~~L~~~gl~--~a~~VlLsG~SAGGlga~l~ 201 (330)
..+.|||+- ......++.|. .++ ++++|.++|.|-||.=|++-
T Consensus 147 ~e~~yyr~~~~D~~ravd~l~--slpevD~~rI~v~G~SqGG~lal~~ 192 (320)
T PF05448_consen 147 PEDYYYRRVYLDAVRAVDFLR--SLPEVDGKRIGVTGGSQGGGLALAA 192 (320)
T ss_dssp TTT-HHHHHHHHHHHHHHHHH--TSTTEEEEEEEEEEETHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH--hCCCcCcceEEEEeecCchHHHHHH
Confidence 456777764 33334466665 456 57899999999999766653
No 175
>PF02553 CbiN: Cobalt transport protein component CbiN; InterPro: IPR003705 The cobalt transport protein CbiN is part of the active cobalt transport system involved in uptake of cobalt in to the cell involved with cobalamin biosynthesis (vitamin B12). It has been suggested that CbiN may function as the periplasmic binding protein component of the active cobalt transport system [].; GO: 0015087 cobalt ion transmembrane transporter activity, 0006824 cobalt ion transport, 0009236 cobalamin biosynthetic process, 0016020 membrane
Probab=20.30 E-value=70 Score=25.43 Aligned_cols=16 Identities=31% Similarity=0.474 Sum_probs=11.8
Q ss_pred CCCchhhHHHHHHHHh
Q 020169 1 MKPMLYFCFVIVLIRS 16 (330)
Q Consensus 1 m~~~l~~~~~~~~~~~ 16 (330)
||+++++.++++|+++
T Consensus 1 ~kn~~l~~~vv~l~~~ 16 (74)
T PF02553_consen 1 MKNLLLLLLVVALAVV 16 (74)
T ss_pred CceeHHHHHHHHHHHH
Confidence 8888888776666654
Done!