BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020171
(330 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S752|LOFG2_ARATH Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana
GN=LOG2 PE=1 SV=1
Length = 388
Score = 334 bits (856), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 167/265 (63%), Positives = 207/265 (78%), Gaps = 17/265 (6%)
Query: 71 SGHYPAHPPPPPPPPQYMEHQKAVTIRNDVNVKKETLRVEPDEENPGQFLVAFTFDAAAP 130
+GH A P P Y+EHQKAVTIRNDVN+KKE+LR+EPD +NPG+FLV+FTFDA
Sbjct: 113 AGHMMAQPTP------YVEHQKAVTIRNDVNLKKESLRLEPDPDNPGRFLVSFTFDATVS 166
Query: 131 GSITVAFFGKEDVDCTLIATKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALTK 190
G I+V FF KE DC L ATKE++L P+T+ F++GLGQKF+Q G+GID S+F+++ L K
Sbjct: 167 GRISVIFFAKESEDCKLTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFK 226
Query: 191 VNA--EIYPIIVRAEARPA--DSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWV 246
A EIYP+ V+AEA P+ ++ E E + + N+QIT AV+E K++G ++V+KQILWV
Sbjct: 227 AAADTEIYPLAVKAEAAPSGGENEEEERSGSKNAQITQAVYE-KDKGEIKIRVVKQILWV 285
Query: 247 NRVRYELQEIYGIGSTVAGDETDS------GKECVICLSEPRDTTVLPCRHMCMCSECAK 300
N RYELQEIYGIG+TV GD+ + GKECVICLSEPRDTTVLPCRHMCMCS CAK
Sbjct: 286 NGTRYELQEIYGIGNTVEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAK 345
Query: 301 VLQFQTNRCPICRQPVERLLEIKVN 325
VL+FQTNRCPICRQPVERLLEIKV+
Sbjct: 346 VLRFQTNRCPICRQPVERLLEIKVH 370
>sp|Q9LFH6|LUL2_ARATH Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana
GN=LUL2 PE=2 SV=1
Length = 299
Score = 323 bits (827), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/294 (57%), Positives = 199/294 (67%), Gaps = 23/294 (7%)
Query: 37 PYPSQYPNQYYPLYPGYYPPPVPVHGAYGYHHMPSGHYPAHPPPPPPPPQYMEHQKAVTI 96
PYP+ PN Y G YP P Y Y M S P QY+EHQ+AVTI
Sbjct: 21 PYPN--PNAQYQ---GNYPSPYQDCARYPYGEMAS------------PVQYVEHQEAVTI 63
Query: 97 RNDVNVKKETLRVEPDEENPGQFLVAFTFDAAAPGSITVAFFGKEDVDCTLIATKEELLK 156
RND+N+KKETLR+EPDE+NPG+FL++FTFDA+ PGSITV FF KE DC LIATKE+L
Sbjct: 64 RNDINLKKETLRLEPDEQNPGKFLLSFTFDASVPGSITVMFFAKEGKDCNLIATKEDLFP 123
Query: 157 PVTITFQQGLGQKFRQPCGTGIDLSMFDEIALTKVN-AEIYPIIVRAEARPADSSEAEAN 215
++F +GL Q+F+Q CGTGID S E L + N ++Y + V+AE D
Sbjct: 124 STQVSFAKGLEQRFKQACGTGIDFSDMSEADLVEANETDVYHVAVKAEVVSEDDHPESGT 183
Query: 216 PTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQEIYGIGSTV---AGDETDSGK 272
P N QIT V EK +G + +V+KQILWVN RY LQEIYGIG+TV D + GK
Sbjct: 184 P--NRQITHVVLEKDHKGEYKARVVKQILWVNGNRYVLQEIYGIGNTVDDNGEDANERGK 241
Query: 273 ECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEIKVNN 326
ECVICLSEPRDTTVLPCRHMCMCS CAK+L+FQTN CPICRQPV+RLLEI VNN
Sbjct: 242 ECVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQTNLCPICRQPVDRLLEITVNN 295
>sp|Q9LYW5|LUL1_ARATH Probable E3 ubiquitin-protein ligase LUL1 OS=Arabidopsis thaliana
GN=LUL1 PE=1 SV=1
Length = 337
Score = 322 bits (825), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/332 (53%), Positives = 223/332 (67%), Gaps = 22/332 (6%)
Query: 8 RRHHSNIPPPTPPPTTRQTQSQYVFAAATPYPSQYPNQYYPLYPGY-YPPPV------PV 60
RR SNIPP +++VFAA PY + PN Y YPG PPPV P
Sbjct: 13 RRQRSNIPPAMETAPLELPPNRFVFAAVPPYLNPNPN-YVDQYPGNCLPPPVTEPPMLPY 71
Query: 61 HGAYGYHHMPSGHYPAHPP------PPPPPPQYMEHQKAVTIRNDVNVKKETLRVEPDEE 114
+ + +H+ P+ + HP P PPP Y+ HQKAVTIRNDVN+KK+TL + PD E
Sbjct: 72 NFNHLHHYPPNSYQLPHPLFHGGRYPILPPPTYV-HQKAVTIRNDVNLKKKTLTLIPDPE 130
Query: 115 NPGQFLVAFTFDAAAPGSITVAFFGKEDVDCTLIATKEELLKPVTITFQQGLGQKFRQPC 174
NP + LV+FTFDA+ PG ITV FF ED +C L ATKE+ L P+T F +GLGQKF Q
Sbjct: 131 NPNRLLVSFTFDASMPGRITVVFFATEDAECNLRATKEDTLPPITFDFGEGLGQKFIQSS 190
Query: 175 GTGIDLSMFDEIALTK-VNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEG 233
GTGIDL+ F + L K V+ +++P+ V+AEA PA+ ++ + N QIT V+ KE+G
Sbjct: 191 GTGIDLTAFKDSELFKEVDTDVFPLAVKAEATPAEEGKSGST---NVQITQVVY-TKEKG 246
Query: 234 GFHVQVIKQILWVNRVRYELQEIYGIGSTVAGDETDSGKECVICLSEPRDTTVLPCRHMC 293
++V+KQILWVN+ RYEL EIYGI +TV G +D GKECV+CLSEPRDTTVLPCRHMC
Sbjct: 247 EIKIEVVKQILWVNKRRYELLEIYGIENTVDG--SDEGKECVVCLSEPRDTTVLPCRHMC 304
Query: 294 MCSECAKVLQFQTNRCPICRQPVERLLEIKVN 325
MCS CAK L+FQTN CP+CRQPVE LLEI N
Sbjct: 305 MCSGCAKALRFQTNLCPVCRQPVEMLLEINKN 336
>sp|Q84ME1|LUL3_ARATH Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana
GN=LUL3 PE=1 SV=1
Length = 378
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/311 (47%), Positives = 196/311 (63%), Gaps = 30/311 (9%)
Query: 37 PYPSQY-PNQYYPLY-PGYYPPPVPVHGAYGYHHMPSGHYPAHPP----PPP-----PPP 85
PY Y NQYYP P Y+ GYHH +G P P P P PP
Sbjct: 78 PYGQNYHQNQYYPQQAPPYFT---------GYHH--NGFNPMMRPVYFGPTPVAVMEPPA 126
Query: 86 QYMEHQKAVTIRNDVNVKKETLRVEPDEENPGQFLVAFTFDAAAPGSITVAFFGKEDVDC 145
Y+EHQ A ++NDVNV K T+R+ D+ NPG +LV+F FDA GS T+ FFG+E+ C
Sbjct: 127 PYVEHQTAKKVKNDVNVNKATVRLVADDLNPGHYLVSFVFDALFDGSFTIIFFGEEESKC 186
Query: 146 TLIATKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALTKVN-AEIYPIIVRAEA 204
T++ E P+ + FQ+G GQKF Q GTGIDL F L+K + E+YP+++ AE
Sbjct: 187 TIVPHLPEAFPPIKVPFQKGAGQKFLQAPGTGIDLGFFSLDDLSKPSPEEVYPLVISAET 246
Query: 205 RPADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQEIYGI----- 259
+ SS +E P + QIT AV EK +G F V+V+KQILW+ RYELQE+YGI
Sbjct: 247 VISPSSVSE-EPLVHKQITQAVLEKTNDGSFKVKVMKQILWIEGERYELQELYGIDNSIT 305
Query: 260 -GSTVAGDETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVER 318
G+ +G E GKECVICL+EP+DT V+PCRH+C+CS+CA+ L+FQTN+CPICRQP+
Sbjct: 306 QGTAASGLEDTGGKECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHE 365
Query: 319 LLEIKVNNAAD 329
L++IKV ++ +
Sbjct: 366 LVKIKVESSDE 376
>sp|Q8LA32|LUL4_ARATH Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana
GN=LUL4 PE=2 SV=1
Length = 359
Score = 258 bits (659), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 124/245 (50%), Positives = 171/245 (69%), Gaps = 5/245 (2%)
Query: 87 YMEHQKAVTIRNDVNVKKETLRVEPDEENPGQFLVAFTFDAAAPGSITVAFFGKEDVDCT 146
Y+E Q A +RNDVNV ++T+R+E D+ PG LV+F FDA GS T+ FF KE+ +CT
Sbjct: 112 YLEQQNAKKVRNDVNVHRDTVRLEVDDLVPGHHLVSFVFDALFDGSFTITFFAKEEPNCT 171
Query: 147 LIATKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALTK-VNAEIYPIIVRAEAR 205
+I E+ P FQ+G GQKF QP GTG DLS F L+K + ++YP+++ AE
Sbjct: 172 IIPQFPEVYSPTRFHFQKGPGQKFLQPSGTGTDLSFFVLDDLSKPLEEDVYPLVISAETI 231
Query: 206 PADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQEIYGI---GST 262
+ +S +E + + Q+T AV EK +G F V+V+KQILW+ VRYEL+E+YG G+
Sbjct: 232 ISPNSISEQSSV-HKQVTQAVLEKDNDGSFKVKVVKQILWIEGVRYELRELYGSTTQGAA 290
Query: 263 VAGDETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
DE+ SG ECVIC++E +DT VLPCRH+CMCS+CAK L+ Q+N+CPICRQP+E LLEI
Sbjct: 291 SGLDESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELLEI 350
Query: 323 KVNNA 327
K+N++
Sbjct: 351 KMNSS 355
>sp|Q96PX1|RN157_HUMAN RING finger protein 157 OS=Homo sapiens GN=RNF157 PE=1 SV=3
Length = 679
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 153/275 (55%), Gaps = 33/275 (12%)
Query: 72 GHYPAHPPPPPPPPQYMEHQKAVTIRNDVNVKKETLR-VEPDEE--NPGQ--------FL 120
G+ P P PPPQ + T+R+ VN++K+TLR V+ EE +PG+ +
Sbjct: 64 GNRPVVFPYAAPPPQ----EPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYN 119
Query: 121 VAFTFDAAAPGSITVAFFGKEDVDCTLIAT--KEELLKPVTITFQQGLGQKFRQPCGTGI 178
V FTFD A +IT+ + E+ + + K+ L+ T+ +++G+ Q+F P T +
Sbjct: 120 VEFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHT-V 178
Query: 179 DLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHV 237
D S + E L ++ E+YP++V A D G+ + + FEK +G F V
Sbjct: 179 DPSEWAEEELGFDLDREVYPLVVHAVVDEGDEY------FGHCHVLLGTFEKHTDGTFCV 232
Query: 238 QVIKQILWVNRVRYELQEIYGI-------GSTVAGDE-TDSGKECVICLSEPRDTTVLPC 289
+ +KQ V+ V Y LQEIYGI S VA DE +D+ ECV+CLS+ RDT +LPC
Sbjct: 233 KPLKQKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPC 292
Query: 290 RHMCMCSECAKVLQFQTNRCPICRQPVERLLEIKV 324
RH+C+C+ CA L++Q N CPICR P LL+I+
Sbjct: 293 RHLCLCNTCADTLRYQANNCPICRLPFRALLQIRA 327
>sp|Q5XIQ4|MGRN1_RAT E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1
PE=2 SV=1
Length = 533
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 146/255 (57%), Gaps = 26/255 (10%)
Query: 90 HQKAVTIRNDVNVKKETLRV---EPDEENPGQ--------FLVAFTFDAAAPGSITVAFF 138
H+ T+R+ VN++K++LR+ + D ++P + + + FTFDA A +IT+
Sbjct: 79 HEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDADARVAITIYCQ 138
Query: 139 GKEDV--DCTLIATKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEI 195
E+ T+ + K L+ T+ +++G+ Q+F P ID S + + L ++ +
Sbjct: 139 AVEEFVNGMTVYSCKNPSLQSETVHYKRGVSQQFSLP-SFKIDFSEWKDDELNFDLDRGV 197
Query: 196 YPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQE 255
+P++++A TG++ + +A FEK +G F V+ +KQ V+RV Y LQE
Sbjct: 198 FPVVIQAVV----DEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQE 253
Query: 256 IYGIGSTV------AGDE-TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNR 308
IYGI + + DE +D+ ECV+CLS+ RDT +LPCRH+C+C+ CA L++Q N
Sbjct: 254 IYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN 313
Query: 309 CPICRQPVERLLEIK 323
CPICR P LL+I+
Sbjct: 314 CPICRLPFRALLQIR 328
>sp|O60291|MGRN1_HUMAN E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1
SV=2
Length = 552
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 145/256 (56%), Gaps = 26/256 (10%)
Query: 90 HQKAVTIRNDVNVKKETLRV---EPDEENPGQ--------FLVAFTFDAAAPGSITVAFF 138
H+ T+R+ VN++K++LR+ + D ++P + + + FTFDA A +IT+
Sbjct: 78 HEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSLEFTFDADARVAITIYCQ 137
Query: 139 GKEDV--DCTLIATKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEI 195
E+ + + K L+ T+ +++G+ Q+F P ID S + + L ++ +
Sbjct: 138 ASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLP-SFKIDFSEWKDDELNFDLDRGV 196
Query: 196 YPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQE 255
+P++++A TG++ + +A FEK +G F V+ +KQ V+RV Y LQE
Sbjct: 197 FPVVIQAVV----DEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQKQIVDRVSYLLQE 252
Query: 256 IYGIGS-----TVAGDE--TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNR 308
IYGI + T D+ +D+ ECV+CLS+ RDT +LPCRH+C+C+ CA L++Q N
Sbjct: 253 IYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN 312
Query: 309 CPICRQPVERLLEIKV 324
CPICR P LL+I+
Sbjct: 313 CPICRLPFRALLQIRA 328
>sp|Q9D074|MGRN1_MOUSE E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1
SV=2
Length = 532
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 146/255 (57%), Gaps = 26/255 (10%)
Query: 90 HQKAVTIRNDVNVKKETLRV---EPDEENPGQ--------FLVAFTFDAAAPGSITVAFF 138
H+ T+R+ VN++K++LR+ + D ++P + + + FTFDA A +IT+
Sbjct: 78 HEPVKTLRSLVNIRKDSLRLVRYKEDADSPTEDGEKPRVLYSLEFTFDADARVAITIYCQ 137
Query: 139 GKEDV--DCTLIATKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEI 195
E++ + + K L+ T+ +++G+ Q+F P ID S + + L ++ +
Sbjct: 138 AVEELVNGVAVYSCKNPSLQSETVHYKRGVSQQFSLP-SFKIDFSEWKDDELNFDLDRGV 196
Query: 196 YPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQE 255
+P++++A TG++ + +A FEK +G F V+ +KQ V+RV Y LQE
Sbjct: 197 FPVVIQAVV----DEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQE 252
Query: 256 IYGIGSTV------AGDE-TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNR 308
IYGI + + DE +D+ ECV+CLS+ RDT +LPCRH+C+C+ CA L++Q N
Sbjct: 253 IYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN 312
Query: 309 CPICRQPVERLLEIK 323
CPICR P LL+I+
Sbjct: 313 CPICRLPFRALLQIR 327
>sp|Q3TEL6|RN157_MOUSE RING finger protein 157 OS=Mus musculus GN=Rnf157 PE=2 SV=2
Length = 685
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 150/275 (54%), Gaps = 33/275 (12%)
Query: 72 GHYPAHPPPPPPPPQYMEHQKAVTIRNDVNVKKETLR-------VEPDEENPGQ----FL 120
G+ P P PPPQ + T+R+ +N++K+TLR V+ E G+ +
Sbjct: 64 GNRPVAFPYAAPPPQ----EPVKTLRSLINIRKDTLRLVKCAEEVKSHGEEAGKAKVHYN 119
Query: 121 VAFTFDAAAPGSITVAFFGKEDVDCTLIAT--KEELLKPVTITFQQGLGQKFRQPCGTGI 178
V FTFD A +IT+ + E+ + + K+ L+ T+ +++G+ Q+F P T +
Sbjct: 120 VEFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVHYKRGVFQQFCLPSHT-V 178
Query: 179 DLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHV 237
D S + E L ++ E+YP++V A D G+ + + FEK +G F V
Sbjct: 179 DPSEWAEEELGFDLDREVYPLVVHAVVDEGDEY------FGHCHVLLGTFEKHPDGTFCV 232
Query: 238 QVIKQILWVNRVRYELQEIYGI-------GSTVAGDE-TDSGKECVICLSEPRDTTVLPC 289
+ +KQ V+ V Y LQEIYGI S VA D+ +D+ ECV+CLS+ RDT +LPC
Sbjct: 233 KPLKQKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDDVSDNSAECVVCLSDVRDTLILPC 292
Query: 290 RHMCMCSECAKVLQFQTNRCPICRQPVERLLEIKV 324
RH+C+C+ CA L++Q N CPICR P LL+I+
Sbjct: 293 RHLCLCNTCADTLRYQANNCPICRLPFRALLQIRA 327
>sp|Q6INH1|RN157_XENLA RING finger protein 157 OS=Xenopus laevis GN=rnf157 PE=2 SV=1
Length = 674
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 150/275 (54%), Gaps = 33/275 (12%)
Query: 72 GHYPAHPPPPPPPPQYMEHQKAVTIRNDVNVKKETLR-VEPDEENPG----------QFL 120
G P P P PQ + T+R+ +N++K+TLR V EE +
Sbjct: 64 GSRPVTFPYTAPSPQ----EPVKTLRSLINIRKDTLRLVRCTEELKTTGVEGSRPKVHYN 119
Query: 121 VAFTFDAAAPGSITVAFFGKEDVDCTLIAT--KEELLKPVTITFQQGLGQKFRQPCGTGI 178
V FTFD A +IT+ + E+ + + K L+ T+ F++G+ Q+F P T +
Sbjct: 120 VEFTFDTDARVAITMYYQATEEFQGGIPSYLPKSSNLQSDTVHFKRGVSQQFCFPSHT-V 178
Query: 179 DLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHV 237
D S + E LT ++ E+YP++V A E E + G+S + MA FEK +G F V
Sbjct: 179 DPSEWREEELTFDLDREVYPMVVHAVVE-----EGEEH-LGHSHVLMATFEKHADGSFCV 232
Query: 238 QVIKQILWVNRVRYELQEIYGI-------GSTVAGDE-TDSGKECVICLSEPRDTTVLPC 289
+ +KQ V+ V Y LQEIYGI S VA DE +D+ ECV+CLS+ RDT +LPC
Sbjct: 233 KPLKQKQVVDGVSYLLQEIYGIENKYNSQDSKVAEDELSDNSAECVVCLSDVRDTLILPC 292
Query: 290 RHMCMCSECAKVLQFQTNRCPICRQPVERLLEIKV 324
RH+C+C+ CA L++Q + CPICR P LL+I+
Sbjct: 293 RHLCLCNACADTLRYQASNCPICRLPFRALLQIRA 327
>sp|Q7ZUL9|MGRN1_DANRE Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1
PE=2 SV=1
Length = 529
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 28/256 (10%)
Query: 90 HQKAVTIRNDVNVKKETLRV-------EPDEENPGQ----FLVAFTFDAAAPGSITVAFF 138
H+ T+R+ VN++K++LR+ + E+ G + V F FD A +IT+
Sbjct: 78 HEPVKTLRSLVNIRKDSLRLVRYKDDSDSTPEDTGDPRVLYSVEFCFDTDARVAITLYCQ 137
Query: 139 GKEDV--DCTLIATKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEI 195
E+ + + K + T+ +++G+ Q+F P ID + + L ++ +
Sbjct: 138 AFEEFANGMAIYSAKSPSMVSETVHYKRGINQQFSLP-SFKIDFTKWKPEELNFDLDKGV 196
Query: 196 YPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFHVQVIKQILWVNRVRYELQE 255
+P++V+A D + TG++ + +A FE+ +G F V+ +KQ V+RV Y LQE
Sbjct: 197 FPLVVQAIVDDGD------DVTGHAHVLLAAFERHVDGSFSVKPLKQKQIVDRVSYLLQE 250
Query: 256 IYGIGS-------TVAGDETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNR 308
IYGI + + + +D+ ECV+CLS+ RDT +LPCRH+C+C+ CA L++Q N
Sbjct: 251 IYGIENRNNQETKSTEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNACADTLRYQANN 310
Query: 309 CPICRQPVERLLEIKV 324
CPICR P LL+I+
Sbjct: 311 CPICRLPFRALLQIRA 326
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2
Length = 943
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 232 EGGFHVQVIKQILWVNRVRYELQEIYGIGSTVAGDETDSGKECVICLSEPRDTTVLPCRH 291
E FH +KQI + RY L + + D+ CVIC S P + +LPCRH
Sbjct: 859 ESSFH-NGLKQIGSIKDQRY-LNRLVSLEK--EKDQLKDQNSCVICASNPPNIVLLPCRH 914
Query: 292 MCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
+CS+C L +CPICR +E + I
Sbjct: 915 SSLCSDCCSKL----TKCPICRSHIENKISI 941
>sp|O10296|IAP1_NPVOP Apoptosis inhibitor 1 OS=Orgyia pseudotsugata multicapsid
polyhedrosis virus GN=IAP1 PE=4 SV=1
Length = 275
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 273 ECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEIKV 324
EC +CL RD +LPCRH C+C +C L +CP CRQ V ++I V
Sbjct: 226 ECKVCLERQRDAVLLPCRHFCVCMQCYFALD---GKCPTCRQDVADFIKIFV 274
>sp|P41435|IAP1_NPVAC Apoptosis inhibitor 1 OS=Autographa californica nuclear
polyhedrosis virus GN=IAP1 PE=4 SV=1
Length = 286
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 265 GDETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEIKV 324
D+ + EC +CL RD ++PCRH C+C +C L +CP CRQ V ++I V
Sbjct: 229 ADDIEEKYECKVCLERQRDAVLMPCRHFCVCVQCYFGLD---QKCPTCRQDVTDFIKIFV 285
>sp|Q8CJC5|NEUL3_MOUSE E3 ubiquitin-protein ligase NEURL3 OS=Mus musculus GN=Neurl3 PE=2
SV=1
Length = 254
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 260 GSTVAGDETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERL 319
G V E SG+ECVIC +T ++PC H C CA + T RCPICR +E +
Sbjct: 183 GEPVPESEVISGEECVICFHNTANTRLMPCGHSHFCGSCAWHIFKDTARCPICRWQIEEV 242
>sp|Q6ZQM0|RFFL_MOUSE E3 ubiquitin-protein ligase rififylin OS=Mus musculus GN=Rffl PE=1
SV=1
Length = 377
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 28/113 (24%)
Query: 234 GFHVQVIKQILWVNRVRY-------ELQE----IY----GIGSTVAGDETDSGKE----- 273
G V+ +K+IL N V Y EL E +Y G+ V+G+E +G
Sbjct: 266 GLTVRQLKEILARNFVNYKGCCEKWELMERVTRLYKDQKGLQHLVSGNEDQNGGAVPSGL 325
Query: 274 ----CVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
C IC+ P D +L C HM C++C K + N CPICRQ V R + +
Sbjct: 326 EENLCKICMDSPIDCVLLECGHMVTCTKCGKRM----NECPICRQYVIRAVHV 374
>sp|Q8CIN9|RFFL_RAT E3 ubiquitin-protein ligase rififylin OS=Rattus norvegicus GN=Rffl
PE=1 SV=1
Length = 362
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 28/113 (24%)
Query: 234 GFHVQVIKQILWVNRVRY-------ELQE----IY----GIGSTVAGDETDSGKE----- 273
G V+ +K+IL N V Y EL E +Y G+ V+G+E +G
Sbjct: 251 GLTVRQLKEILARNFVNYKGCCEKWELMERVTRLYKDQKGLQHLVSGNEDQNGGAVPSGL 310
Query: 274 ----CVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
C IC+ P D +L C HM C++C K + N CPICRQ V R + +
Sbjct: 311 EENLCKICMDSPIDCVLLECGHMVTCTKCGKRM----NECPICRQYVIRAVHV 359
>sp|Q8BUH7|RNF26_MOUSE Ring finger protein 26 OS=Mus musculus GN=Rnf26 PE=2 SV=1
Length = 424
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 266 DETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQ----FQTNRCPICRQPVERLLE 321
E + K+CVIC + + +LPCRH+C+C C ++L + N CP+CR+ + + L
Sbjct: 363 KEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRN-CPLCRRSILQTLN 421
Query: 322 I 322
+
Sbjct: 422 V 422
>sp|Q5M870|NEUL3_RAT E3 ubiquitin-protein ligase NEURL3 OS=Rattus norvegicus GN=Neurl3
PE=2 SV=1
Length = 254
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 267 ETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERL 319
E SG+ECVIC +T ++PC H C CA + T RCP+CR +E +
Sbjct: 190 EVTSGEECVICFHNTANTRLMPCGHSQFCGSCAWHIFKDTARCPMCRWQIEEV 242
>sp|P29503|NEUR_DROME Protein neuralized OS=Drosophila melanogaster GN=neur PE=1 SV=2
Length = 754
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 267 ETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQ---TNRCPICRQPVERLLE 321
TDS EC IC P D+ + C HMCMC +CA + Q++ +CP+CR + ++
Sbjct: 694 STDSSAECTICYENPIDSVLYMCGHMCMCYDCA-IEQWRGVGGGQCPLCRAVIRDVIR 750
>sp|Q24746|NEUR_DROVI Protein neuralized OS=Drosophila virilis GN=neur PE=4 SV=1
Length = 747
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 267 ETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQ---TNRCPICRQPVERLLE 321
TDS EC IC P D+ + C HMCMC +CA + Q++ +CP+CR + ++
Sbjct: 687 STDSSAECTICYENPIDSVLYMCGHMCMCYDCA-IEQWRGVGGGQCPLCRAVIRDVIR 743
>sp|Q5M7X9|MUL1A_DANRE Mitochondrial ubiquitin ligase activator of nfkb 1-A OS=Danio rerio
GN=mul1a PE=2 SV=1
Length = 341
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 17/91 (18%)
Query: 243 ILWVNR-------VRYE----LQEIYGIGSTVAGDETDSGKE--CVICLSEPRDTTVLPC 289
++W R +R+E +E G+G+ E D+G E CVICLS PR +L C
Sbjct: 250 LIWTGRRYYRQLKLRWEQENLRREFEGMGT--GEREEDNGVENACVICLSNPRGCVLLDC 307
Query: 290 RHMCMCSECAKVLQFQTNRCPICRQPVERLL 320
H+C C C + L CPICRQ ++R++
Sbjct: 308 GHVCCCFRCYQAL--PQPFCPICRQHIKRVV 336
>sp|Q9BY78|RNF26_HUMAN RING finger protein 26 OS=Homo sapiens GN=RNF26 PE=2 SV=1
Length = 433
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 266 DETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQ----FQTNRCPICRQPVERLLE 321
E + K+CVIC + + +LPCRH+C+C C ++L + N CP+CR+ + + L
Sbjct: 372 KEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRN-CPLCRRGILQTLN 430
Query: 322 I 322
+
Sbjct: 431 V 431
>sp|Q0MW30|NEU1B_MOUSE E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus GN=Neurl1b PE=1
SV=1
Length = 546
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 273 ECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNR-CPICRQPVERLLEI 322
EC +C DT + C HMC+C C L+ Q CPICR+P++ +++I
Sbjct: 493 ECTVCFDSEVDTVIYTCGHMCLCHGCGLRLRRQARACCPICRRPIKDVIKI 543
>sp|A8MQ27|NEU1B_HUMAN E3 ubiquitin-protein ligase NEURL1B OS=Homo sapiens GN=NEURL1B PE=1
SV=1
Length = 555
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 273 ECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNR-CPICRQPVERLLEI 322
EC +C DT + C HMC+C C L+ Q CPICR+P++ +++I
Sbjct: 502 ECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552
>sp|Q8WZ73|RFFL_HUMAN E3 ubiquitin-protein ligase rififylin OS=Homo sapiens GN=RFFL PE=1
SV=1
Length = 363
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 28/113 (24%)
Query: 234 GFHVQVIKQILWVNRVRY-------ELQE----IY----GIGSTVAGDETDSGKE----- 273
G V+ +K+IL N V Y EL E +Y G+ V+G E +G
Sbjct: 252 GLTVRQLKEILARNFVNYKGCCEKWELMERVTRLYKDQKGLQHLVSGAEDQNGGAVPSGL 311
Query: 274 ----CVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
C IC+ P D +L C HM C++C K + N CPICRQ V R + +
Sbjct: 312 EENLCKICMDSPIDCVLLECGHMVTCTKCGKRM----NECPICRQYVIRAVHV 360
>sp|Q7XI08|XB34_ORYSJ Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp.
japonica GN=XBOS34 PE=2 SV=1
Length = 513
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 274 CVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
CVICL P + +PC HM C C K ++ + CPICR + +++ +
Sbjct: 462 CVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRL 510
>sp|P97587|CGRF1_RAT Cell growth regulator with RING finger domain protein 1 OS=Rattus
norvegicus GN=Cgrrf1 PE=2 SV=1
Length = 332
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 263 VAGDETD----SGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVER 318
+AG E D S K+CV+C + + +LPCRH C+C C V F+ +CP+CRQ V+
Sbjct: 259 LAGAEVDPVEESSKDCVVCQNGGVNWVLLPCRHACLCDSC--VCYFK--QCPMCRQFVQE 314
Query: 319 LLEIKVNNAAD 329
+ AD
Sbjct: 315 SFALCGQKEAD 325
>sp|Q99675|CGRF1_HUMAN Cell growth regulator with RING finger domain protein 1 OS=Homo
sapiens GN=CGRRF1 PE=1 SV=1
Length = 332
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 253 LQEIYGIGSTVAGDETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPIC 312
L E G+ + ++ K+CV+C + + +LPCRH C+C C K Q +CP+C
Sbjct: 253 LLEKVGLSESEVEPSEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQ----QCPMC 308
Query: 313 RQPVE 317
RQ V+
Sbjct: 309 RQFVQ 313
>sp|Q4R7G8|MUL1_MACFA Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Macaca
fascicularis GN=MUL1 PE=2 SV=1
Length = 352
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 266 DETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLL 320
D CV+CLS + L C H+C C+EC + L + +CPICRQ + R++
Sbjct: 294 DRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALP-EPKKCPICRQAITRVI 347
>sp|Q969V5|MUL1_HUMAN Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Homo sapiens
GN=MUL1 PE=1 SV=1
Length = 352
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 266 DETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLL 320
D CV+CLS + L C H+C C+EC + L + +CPICRQ + R++
Sbjct: 294 DRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALP-EPKKCPICRQAITRVI 347
>sp|Q8BMJ7|CGRF1_MOUSE Cell growth regulator with RING finger domain protein 1 OS=Mus
musculus GN=Cgrrf1 PE=2 SV=1
Length = 332
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 8/59 (13%)
Query: 263 VAGDETD----SGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVE 317
+AG++ D S ++CV+C + + +LPCRH C+C C + + +CP+CRQ V+
Sbjct: 259 LAGNDGDPVEESSRDCVVCQNGGVNWVLLPCRHACLCDSCVRYFK----QCPMCRQFVQ 313
>sp|Q0WPJ7|RF298_ARATH Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana
GN=RF298 PE=2 SV=1
Length = 814
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 272 KECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQT-NRCPICRQPVERLLEIK 323
+ECV+CLSE LPC H +CS+C ++ + + CP CR ++R ++ +
Sbjct: 758 RECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQRRIQAR 810
>sp|Q923S6|NEU1A_MOUSE Neuralized-like protein 1A OS=Mus musculus GN=Neurl PE=1 SV=1
Length = 574
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 273 ECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNR-CPICRQPVERLLE 321
EC IC DT + C HMC+C C L+ + CPICR+P++ +++
Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYSCGLRLKKALHACCPICRRPIKDIIK 569
>sp|O76050|NEU1A_HUMAN Neuralized-like protein 1A OS=Homo sapiens GN=NEURL PE=2 SV=1
Length = 574
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 273 ECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNR-CPICRQPVERLLE 321
EC IC DT + C HMC+C C L+ + CPICR+P++ +++
Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHACCPICRRPIKDIIK 569
>sp|Q4FE47|XB35_ARATH Putative E3 ubiquitin-protein ligase XBAT35 OS=Arabidopsis thaliana
GN=XBAT35 PE=2 SV=1
Length = 462
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 261 STVAGDETDSGKE--CVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVER 318
++ G+ + G C ICL P + +PC H+ C C K ++ + CP+CR +++
Sbjct: 396 ASTEGERKEDGNTGTCAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQ 455
Query: 319 LLEI 322
++++
Sbjct: 456 VIKL 459
>sp|Q8VCM5|MUL1_MOUSE Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Mus musculus
GN=Mul1 PE=2 SV=2
Length = 352
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 266 DETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLL 320
D CV+CLS + L C H+C C +C L + RCPICR+ + R++
Sbjct: 294 DRESLKSACVVCLSNFKSCVFLECGHVCSCRQCYLALP-EPKRCPICRREITRVI 347
>sp|Q6R7I2|IAP1_OSHVF Putative apoptosis inhibitor ORF42 OS=Ostreid herpesvirus 1
(isolate France) GN=ORF42 PE=4 SV=1
Length = 364
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 270 SGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLE 321
+ +ECVICL DT + PC H +C C+ Q +CP+CR+ +E+ ++
Sbjct: 311 NDEECVICLGAKADTILKPCLHYSLCYGCST----QVQKCPLCRKKIEKRVQ 358
>sp|Q6AYH3|RNF34_RAT E3 ubiquitin-protein ligase RNF34 OS=Rattus norvegicus GN=Rnf34
PE=1 SV=1
Length = 381
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 234 GFHVQVIKQILWVNRVRY---------------------ELQEIYGIGSTVAGDETDSGK 272
G V+ +K+IL N V Y E Q+ YG + +E DS
Sbjct: 275 GMSVRQLKEILARNFVNYSGCCEKWELVEKVNRLYKENEENQKSYGERMQLQDEEDDS-- 332
Query: 273 ECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
C IC+ D +L C HM C++C K + + CPICRQ V R + +
Sbjct: 333 LCRICMDAVIDCVLLECGHMVTCTKCGK----RMSECPICRQYVVRAVHV 378
>sp|Q99KR6|RNF34_MOUSE E3 ubiquitin-protein ligase RNF34 OS=Mus musculus GN=Rnf34 PE=1
SV=1
Length = 376
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 234 GFHVQVIKQILWVNRVRY---------------------ELQEIYGIGSTVAGDETDSGK 272
G V+ +K+IL N V Y E Q+ YG + +E DS
Sbjct: 270 GMSVRQLKEILARNFVNYSGCCEKWELVEKVNRLYKENEENQKSYGERMQLQDEEDDS-- 327
Query: 273 ECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
C IC+ D +L C HM C++C K + + CPICRQ V R + +
Sbjct: 328 LCRICMDAVIDCVLLECGHMVTCTKCGK----RMSECPICRQYVVRAVHV 373
>sp|Q5NVC7|RNF34_PONAB E3 ubiquitin-protein ligase RNF34 OS=Pongo abelii GN=RNF34 PE=2
SV=2
Length = 372
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 234 GFHVQVIKQILWVNRVRY---------------------ELQEIYGIGSTVAGDETDSGK 272
G V+ +K+IL N V Y E Q+ YG + +E DS
Sbjct: 266 GMSVRQLKEILARNFVNYSGCCEKWELVEKVNRLYKENEENQKSYGERLQLQDEEDDS-- 323
Query: 273 ECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
C IC+ D +L C HM C++C K + + CPICRQ V R + +
Sbjct: 324 LCRICMDAVIDCVLLECGHMVTCTKCGK----RMSECPICRQYVVRAVHV 369
>sp|Q969K3|RNF34_HUMAN E3 ubiquitin-protein ligase RNF34 OS=Homo sapiens GN=RNF34 PE=1
SV=1
Length = 372
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 234 GFHVQVIKQILWVNRVRY---------------------ELQEIYGIGSTVAGDETDSGK 272
G V+ +K+IL N V Y E Q+ YG + +E DS
Sbjct: 266 GMSVRQLKEILARNFVNYSGCCEKWELVEKVNRLYKENEENQKSYGERLQLQDEEDDS-- 323
Query: 273 ECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
C IC+ D +L C HM C++C K + + CPICRQ V R + +
Sbjct: 324 LCRICMDAVIDCVLLECGHMVTCTKCGK----RMSECPICRQYVVRAVHV 369
>sp|Q5E9J6|RNF34_BOVIN E3 ubiquitin-protein ligase RNF34 OS=Bos taurus GN=RNF34 PE=2 SV=1
Length = 375
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 234 GFHVQVIKQILWVNRVRY---------------------ELQEIYGIGSTVAGDETDSGK 272
G V+ +K+IL N V Y E Q+ YG + +E DS
Sbjct: 269 GMSVRQLKEILARNFVNYSGCCEKWELVEKVNRLYKENEENQKSYGERLQLQDEEDDS-- 326
Query: 273 ECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
C IC+ D +L C HM C++C K + + CPICRQ V R + +
Sbjct: 327 LCRICMDAVIDCVLLECGHMVTCTKCGK----RMSECPICRQYVVRAVHV 372
>sp|Q557E7|CBLA_DICDI E3 ubiquitin-protein ligase cblA OS=Dictyostelium discoideum
GN=cblA-1 PE=1 SV=1
Length = 665
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 268 TDSGKE-CVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
+D K+ C +C+ +T L C H+ CS C+ L+ +CPICR + R++ I
Sbjct: 611 SDESKDLCTVCMDNEINTVFLECGHLSCCSLCSVKLK----KCPICRSRITRVINI 662
>sp|C0HBT3|RN146_SALSA E3 ubiquitin-protein ligase rnf146 OS=Salmo salar GN=rnf146 PE=2
SV=1
Length = 349
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 273 ECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPV-ERLLE 321
EC ICL LPCRH+ C C K +Q+ RC +CRQ V E LE
Sbjct: 40 ECAICLQSCVHPVQLPCRHV-FCFLCVKGASWQSKRCALCRQEVPEDFLE 88
>sp|Q9FPH0|XB34_ARATH Putative E3 ubiquitin-protein ligase XBAT34 OS=Arabidopsis thaliana
GN=XBAT34 PE=2 SV=1
Length = 376
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 30/49 (61%)
Query: 274 CVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEI 322
CVIC+ P + +PC H+ C C K ++ + CP+CR +++++++
Sbjct: 325 CVICVDAPSEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKL 373
>sp|Q6ZSG1|RN165_HUMAN RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1
Length = 346
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 258 GIGSTVAGDETDSGKECVICLS---EPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQ 314
G G G+E+D+ ++C ICLS + D LPC H+ C + +CPICR
Sbjct: 278 GKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHL-FHQLCVDQWLAMSKKCPICRV 336
Query: 315 PVERLL 320
+E L
Sbjct: 337 DIETQL 342
>sp|Q86YT6|MIB1_HUMAN E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1
Length = 1006
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 272 KECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVER 318
+ECV+C + PC HMC C CA +++ +C CR VER
Sbjct: 864 EECVVCSDKKAAVLFQPCGHMCACENCANLMK----KCVQCRAVVER 906
Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 262 TVAGDETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLE 321
++ +++++ +EC++C RDT PC H+ CS C+ + +C IC++ V+ +
Sbjct: 807 SMISNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSP----RVKKCLICKEQVQSRTK 862
Query: 322 IK 323
I+
Sbjct: 863 IE 864
>sp|Q6GNY1|MIB1_XENLA E3 ubiquitin-protein ligase mib1 OS=Xenopus laevis GN=mib1 PE=2
SV=1
Length = 1011
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 272 KECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVER 318
+ECV+C + PC HMC C CA +++ +C CR VER
Sbjct: 865 EECVVCSDKKAAVLFQPCGHMCACENCASLMK----KCVQCRAVVER 907
Score = 41.2 bits (95), Expect = 0.011, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 262 TVAGDETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLE 321
++ +++++ +EC++C RDT PC H+ CS C+ + +C +C++ V+ +
Sbjct: 808 SMINNDSETLEECMVCSDLKRDTLFGPCGHIATCSLCSP----RVKKCLLCKEQVQSRTK 863
Query: 322 IK 323
I+
Sbjct: 864 IE 865
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,409,730
Number of Sequences: 539616
Number of extensions: 6875563
Number of successful extensions: 56219
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 1054
Number of HSP's that attempted gapping in prelim test: 39704
Number of HSP's gapped (non-prelim): 8811
length of query: 330
length of database: 191,569,459
effective HSP length: 118
effective length of query: 212
effective length of database: 127,894,771
effective search space: 27113691452
effective search space used: 27113691452
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)