BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020172
(330 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 219/322 (68%), Positives = 244/322 (75%), Gaps = 34/322 (10%)
Query: 23 SLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWNFGSNSSA-VSSGESENNAPNNFA 81
SLDCLLSATNSN+ +TS EDD GIS++FS DCRNLWNF NSSA VSSGESENN N
Sbjct: 1 SLDCLLSATNSNT-DTSVEDD-GISMIFS-DCRNLWNFAPNSSAAVSSGESENNTCNPGN 57
Query: 82 RNNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRPGSTKRKNIDDHQSEQ------- 134
+ + PV+ ELD ET+SHCSS QY G+ + +P STKR N DH SE
Sbjct: 58 KEMHCPVS-ELD-ETVSHCSSDQY---GKNRDCSQTKPVSTKRSN--DHCSELKMGLKHP 110
Query: 135 -FHLFQG------GGFKLISENPPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPD 187
F + Q GGF+LIS+NPPK+KKPR DKRPSS+NINFQ +S+ SS D
Sbjct: 111 FFDILQSECSNQEGGFRLISDNPPKSKKPRSDKRPSSSNINFQQPSSSISSSIEEP---D 167
Query: 188 PEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVL 247
PEAIA MKEMIYRAAAFRPVNLGLEV EKPKRKNVRISTDPQTVAARQRRERIS+RIRVL
Sbjct: 168 PEAIAQMKEMIYRAAAFRPVNLGLEVAEKPKRKNVRISTDPQTVAARQRRERISDRIRVL 227
Query: 248 QRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMNYP-PTNLAFSSL 306
Q +VPGGSKMDTASMLDEAANYLKFLRSQVKALEN GH+ S+N P PTN+AFSSL
Sbjct: 228 QGMVPGGSKMDTASMLDEAANYLKFLRSQVKALENLGHKL----DSVNCPQPTNIAFSSL 283
Query: 307 PFNNNSFPVQTHFSLQNPNHIH 328
PF N+SFP+Q HF QNPNHIH
Sbjct: 284 PF-NHSFPLQNHFPFQNPNHIH 304
>gi|255549698|ref|XP_002515900.1| DNA binding protein, putative [Ricinus communis]
gi|223544805|gb|EEF46320.1| DNA binding protein, putative [Ricinus communis]
Length = 395
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 221/326 (67%), Positives = 247/326 (75%), Gaps = 40/326 (12%)
Query: 18 TCSLESLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWNFGSNSSAVSSGESENNAP 77
T SLESLDCLLSATNSN+ +TS EDD GIS++FS DCRNLWNF +NS+A SSGESENN
Sbjct: 95 TGSLESLDCLLSATNSNT-DTSVEDD-GISMIFS-DCRNLWNFSANSAA-SSGESENNTS 150
Query: 78 NNFARNNNGPVNNELDHETIS---HCSSVQYVNNGRIVHQEELRPGSTKRKNID-DHQSE 133
N ARN +E ++IS CS +P STKR N + +++
Sbjct: 151 N--ARNKEMHCPDETVSQSISSDKKCSQTS-------------KPVSTKRSNDQTELKAD 195
Query: 134 QFHLFQG------GGFKLISENPPKAKKPRLD-KRPSSANINFQLQASNNSSVSSSIEEP 186
F L Q GGF+LISENP K+K+ R D K+PSS+NINFQ +S SVSSSIEEP
Sbjct: 196 IFDLLQTNSCTTQGGFRLISENPSKSKRLRSDNKKPSSSNINFQQPSS---SVSSSIEEP 252
Query: 187 DPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRV 246
DPEAIA MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRV
Sbjct: 253 DPEAIAQMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRV 312
Query: 247 LQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMNYPPTNLAFSSL 306
LQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN GH+ +N PPTN+AFSSL
Sbjct: 313 LQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENLGHK-----LEVNSPPTNIAFSSL 367
Query: 307 PFNNNSF-PVQTHF-SLQNPNHIHRP 330
PFN++ F P+QTHF SLQNPNHIH P
Sbjct: 368 PFNSHPFHPMQTHFSSLQNPNHIHHP 393
>gi|359482873|ref|XP_003632856.1| PREDICTED: transcription factor bHLH87-like [Vitis vinifera]
Length = 471
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 220/344 (63%), Positives = 249/344 (72%), Gaps = 37/344 (10%)
Query: 4 QSQVANK----AVGVSTTTCSLESLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWN 59
Q QV N GVS T SLESLDCLLSATNSN+ ETS EDD GIS++FS DCRNLWN
Sbjct: 146 QFQVVNGFQDGTAGVSATG-SLESLDCLLSATNSNT-ETSIEDD-GISVIFS-DCRNLWN 201
Query: 60 FGSNSSAVSSGESENNAPNNFARNNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRP 119
FGS S AVSSG+SENN N + VN ELD ET+S +S + N G E +P
Sbjct: 202 FGSGS-AVSSGDSENNGFNTRKKEMRCAVN-ELD-ETVSQGASDRLANPGIC---SETKP 255
Query: 120 GSTKRKNIDDHQ---SEQFHLFQ---------GGGFKLISENPPKAKKPRLDKRP-SSAN 166
STKR + D ++ S +H F GGF+LISEN PK KKPR +KRP SS+N
Sbjct: 256 NSTKR-SCDQNELKVSPNYHCFDLLQSDACTPDGGFRLISENSPKPKKPRAEKRPPSSSN 314
Query: 167 INFQLQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRIST 226
INFQ SS +SS+EEPD EAIA MKE+IYRAAAFRPVN G++ VEKPKRKNVRIST
Sbjct: 315 INFQ----QPSSSASSVEEPDSEAIAQMKEIIYRAAAFRPVNFGMDAVEKPKRKNVRIST 370
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQ 286
DPQTVAARQRRERISERIRVLQRLVPGG+KMDTASMLDEAANYLKFLRSQVKALE GH+
Sbjct: 371 DPQTVAARQRRERISERIRVLQRLVPGGNKMDTASMLDEAANYLKFLRSQVKALETLGHK 430
Query: 287 KPDHHHSMNYPPTNLAFSSLPFNNNSFPVQTHFSLQNPNHIHRP 330
S+N TNL FS+LPF N+SFP+QTH LQNP+ IH+P
Sbjct: 431 ----LDSVNCVHTNLPFSALPF-NHSFPMQTHLPLQNPSPIHQP 469
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 189/310 (60%), Positives = 221/310 (71%), Gaps = 24/310 (7%)
Query: 19 CSLESLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWNFGSNSSAVSSGESENNAPN 78
CSLE DCL+SATNSN+ +TS EDDDGIS++ S DC NLWN S S S+GESE+NA N
Sbjct: 144 CSLEPFDCLISATNSNT-DTSVEDDDGISMILS-DCGNLWNNFSYGSVASTGESESNASN 201
Query: 79 NFARNNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRPGSTKRKNIDDHQSEQFHLF 138
++ PVN E+D ET+S + + R Q ++ +I + S
Sbjct: 202 GRNKDMQCPVN-EVD-ETVSQTVESEANCSKRSHDQSKMIQVGDSCFSIVQNSSP----I 255
Query: 139 QGGGFKLISENPPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDPEAIAHMKEMI 198
+ GGF+LIS+NPP+ KKPR D SS NINFQ NSS+SSSIEEPDPEAIA MKEMI
Sbjct: 256 EEGGFRLISDNPPECKKPRWDMSSSSNNINFQ---QPNSSISSSIEEPDPEAIAQMKEMI 312
Query: 199 YRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMD 258
YRAAAFRPVN GLEVVEK KRKNV+ISTDPQTVAAR RRERISE+IRVLQ+LVPGGSKMD
Sbjct: 313 YRAAAFRPVNFGLEVVEKLKRKNVKISTDPQTVAARHRRERISEKIRVLQKLVPGGSKMD 372
Query: 259 TASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMNYPPTNLAFSSLPFNNNSFPVQTH 318
TASMLDEAANYLKFLRSQVKALE+ G++ +MN PPT++AFS P SFP+QT
Sbjct: 373 TASMLDEAANYLKFLRSQVKALESLGNKV----DAMNCPPTSIAFSFNP----SFPMQTP 424
Query: 319 FSLQNPNHIH 328
S HIH
Sbjct: 425 LS-----HIH 429
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 184/307 (59%), Positives = 216/307 (70%), Gaps = 33/307 (10%)
Query: 21 LESLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWNFGSNSSAVSSGESENNAPNNF 80
LES DCL+SATNSN+ TS EDDDGIS++ S DC NLW+ S SA S+GESE+NA N
Sbjct: 142 LESFDCLISATNSNTDITSVEDDDGISMILS-DCGNLWSNFSYGSAASTGESESNASN-- 198
Query: 81 ARNNN---GPVNNELDHETISHCSSVQYVNNGRIVHQEELRPGSTKRKNIDDHQSEQFHL 137
RN + PVN E+D ET+S + N + H + +K + D F +
Sbjct: 199 GRNKDMQCSPVNIEVD-ETVSQTVESE-ANCSKRSHAHD----QSKMIKVGD---SCFSI 249
Query: 138 FQG------GGFKLISE-NPPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDPEA 190
Q GGF+L+S+ N P+ KK R D SS NINFQ NSS+SSSIEEPDPEA
Sbjct: 250 VQNSSPIEEGGFRLVSDINQPECKKSRWDMSSSSNNINFQ---QPNSSISSSIEEPDPEA 306
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
IA MKEMIYRAAAFRPVN GLEV EKPKRKNV+ISTDPQTVAAR RRERI+E+IRVLQ+L
Sbjct: 307 IAQMKEMIYRAAAFRPVNFGLEVAEKPKRKNVKISTDPQTVAARHRRERINEKIRVLQKL 366
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMNYPPTNLAFSSLPFNN 310
VPGGSKMDTASMLDEAANYLKFLRSQVKALE+ G++ +MN PPT++AFS P
Sbjct: 367 VPGGSKMDTASMLDEAANYLKFLRSQVKALESLGNKV----DAMNCPPTSIAFSFNP--- 419
Query: 311 NSFPVQT 317
SFP+QT
Sbjct: 420 -SFPMQT 425
>gi|147797615|emb|CAN65002.1| hypothetical protein VITISV_023488 [Vitis vinifera]
Length = 447
Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 225/344 (65%), Gaps = 61/344 (17%)
Query: 4 QSQVANK----AVGVSTTTCSLESLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWN 59
Q QV N GVS T SLESLDCLL NLWN
Sbjct: 146 QFQVVNGFQDGTAGVSATG-SLESLDCLL---------------------------NLWN 177
Query: 60 FGSNSSAVSSGESENNAPNNFARNNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRP 119
FGS S AVSSG+SENN N + VN ELD ETIS SS + N G E +P
Sbjct: 178 FGSGS-AVSSGDSENNGFNTRKKEMRCAVN-ELD-ETISQGSSDRLANPGIC---PETKP 231
Query: 120 GSTKRKNIDDHQ---SEQFHLFQ---------GGGFKLISENPPKAKKPRLDKRP-SSAN 166
S KR + D ++ S +H F GGF+LISEN PK KKPR +KRP SS+N
Sbjct: 232 NSMKR-SCDQNELKVSPNYHCFDLLQSDACTPDGGFRLISENSPKPKKPRSEKRPPSSSN 290
Query: 167 INFQLQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRIST 226
INFQ SS +SS+EEPD EAIA MKE+IYRAAAFRPVN G++ VEKPKRKNVRIST
Sbjct: 291 INFQ----QPSSSASSVEEPDSEAIAQMKEIIYRAAAFRPVNFGMDAVEKPKRKNVRIST 346
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQ 286
DPQTVAARQRRERISERIRVLQRLVPGG+KMDTASMLDEAANYLKFLRSQVKALE GH+
Sbjct: 347 DPQTVAARQRRERISERIRVLQRLVPGGNKMDTASMLDEAANYLKFLRSQVKALETLGHK 406
Query: 287 KPDHHHSMNYPPTNLAFSSLPFNNNSFPVQTHFSLQNPNHIHRP 330
S+N TNL FS+LPF N+SFP+QTH LQNP+ IH+P
Sbjct: 407 L----DSVNCVHTNLPFSALPF-NHSFPMQTHLPLQNPSPIHQP 445
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 181/310 (58%), Positives = 215/310 (69%), Gaps = 39/310 (12%)
Query: 23 SLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWNFGSNSSAVSSGESENNAPNNFAR 82
SLDCLLSATNSN+ +TS EDD GIS++ DC NLWNF S+A SSGESE NA N +
Sbjct: 207 SLDCLLSATNSNT-DTSVEDD-GISMILP-DCGNLWNFSHGSAAASSGESETNASNG-TK 262
Query: 83 NNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRPGSTKRKNIDDHQSEQFHLFQG-- 140
N + +T+S SS ++L+P KR+N + F + +
Sbjct: 263 NKHMEFQVNEPVQTVSQSSS------------DQLKP---KRRNNQSSDDQYFTMLENSP 307
Query: 141 --GGFKLISENPPKAKKPRLDK-RPSSANINFQLQASNNSSVSSSIEEPDPEAIAHMKEM 197
GGF+LISENPPK KKPR +K SS+NINFQ S SSSIEEPDPEAIA MKEM
Sbjct: 308 IEGGFRLISENPPKCKKPRWEKGSCSSSNINFQQPNS-----SSSIEEPDPEAIAQMKEM 362
Query: 198 IYRAAAFRPVNL-GLE-VVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGS 255
IYRAAAFRPV+L GLE V EKPKRKNV+IS+DPQTVAARQRRERIS+RIRVLQ++VPGGS
Sbjct: 363 IYRAAAFRPVSLLGLEEVAEKPKRKNVKISSDPQTVAARQRRERISDRIRVLQKIVPGGS 422
Query: 256 KMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMNY-PPTNLAFSSLPFNNNSFP 314
KMDTASMLDEAANYLKFLRSQVKALE+ G++ +M+Y P+++AFS P SFP
Sbjct: 423 KMDTASMLDEAANYLKFLRSQVKALESLGNKVST---AMDYCSPSSIAFSFNP----SFP 475
Query: 315 VQTHFSLQNP 324
+Q Q P
Sbjct: 476 MQMKDDYQLP 485
>gi|449448090|ref|XP_004141799.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 393
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 183/319 (57%), Positives = 222/319 (69%), Gaps = 48/319 (15%)
Query: 15 STTTCSLESLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWNFGSNSSAVSSGESEN 74
+ TTCSLESLDCLLSATNSN+ +TS EDD +S++ + D NLWNFG N+ AVSS ESE
Sbjct: 110 TVTTCSLESLDCLLSATNSNT-DTSVEDDGSVSMMLT-DYTNLWNFGGNA-AVSSKESEK 166
Query: 75 NAPNNFARNNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRPGSTKRKNIDDHQSEQ 134
N N+ R+ HE ++ + + I+ N+ D S+
Sbjct: 167 NGSNSTKRS----------HEQTQFKAADYSIFSNNII-------------NLSDSTSD- 202
Query: 135 FHLFQGGGFKLISE-NPPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDPEAIAH 193
GGF++I++ + PK KKPR +K PSS+NINFQ S+ SS +EPDPEAIA
Sbjct: 203 -----SGGFRIITDHDLPKQKKPRSEKPPSSSNINFQQSCSSGSSCID--QEPDPEAIAQ 255
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
MKEMIYRAAAFRPVNLGLE++EKPKRKNVRIS+DPQTVAARQRRERISERIRVLQRLVPG
Sbjct: 256 MKEMIYRAAAFRPVNLGLEMIEKPKRKNVRISSDPQTVAARQRRERISERIRVLQRLVPG 315
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMNYPPTNLAFSSLPFNNNSF 313
GSKMDTASMLDEAANYLKFL+SQ+KALEN G + S+N PPT++AFS P SF
Sbjct: 316 GSKMDTASMLDEAANYLKFLKSQIKALENLGQK----LESLNCPPTSIAFSFNP----SF 367
Query: 314 PVQT-----HFSLQNPNHI 327
P+QT +F+L NPNH+
Sbjct: 368 PIQTSSSHNNFTLLNPNHL 386
>gi|357454723|ref|XP_003597642.1| Transcription factor bHLH87 [Medicago truncatula]
gi|355486690|gb|AES67893.1| Transcription factor bHLH87 [Medicago truncatula]
Length = 392
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 191/336 (56%), Positives = 226/336 (67%), Gaps = 57/336 (16%)
Query: 7 VANKAVGVSTTTCSLES-LDCLLSATNSNSAETSAEDDDGISILFSSDC--RNLWNFGSN 63
+A++ + STTTCSLES LDCLLSAT +++ +T++ DDGIS++FS DC RNLWNF +
Sbjct: 89 MAHQPISKSTTTCSLESSLDCLLSATTNSNTDTNSVQDDGISMIFS-DCKNRNLWNFSAV 147
Query: 64 SSAVSSGESENNAPNNFARNNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRPGSTK 123
SSA S + N + ELD ET+S SS Q G+I+ ++ STK
Sbjct: 148 SSAESESTNARNKDMQYGFK-------ELDQETVSPASSDQ----GKIIDNSKVH--STK 194
Query: 124 RKNIDDHQ------------SEQFHLFQGGGFKLISENPPKAKKPRLD-KRPSSANINFQ 170
R NID + S +F GFKLISE PPK+KKPR D K P S+NINFQ
Sbjct: 195 RTNIDQYDPCFSITAQNSSSSTEF------GFKLISEKPPKSKKPRWDNKCPGSSNINFQ 248
Query: 171 LQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPV-NLGLEVVEKPKRKNVRISTDPQ 229
+SS EEPDPEAIA MKEMIYRAAAFRPV NLGLEV+EKPKRKNV+IS DPQ
Sbjct: 249 -------QPNSSFEEPDPEAIAQMKEMIYRAAAFRPVTNLGLEVMEKPKRKNVKISKDPQ 301
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPD 289
TVAARQRRERISERIRVLQ++VPGG+KMDTASMLDEAANYLKFLR+QVK LEN G+ K D
Sbjct: 302 TVAARQRRERISERIRVLQKIVPGGTKMDTASMLDEAANYLKFLRAQVKELENIGN-KID 360
Query: 290 HHHSMNYPPTNLAFSSLPFNNNSFPVQTHFSLQNPN 325
+ N PPTN+AFS P S+QNPN
Sbjct: 361 TVN--NCPPTNIAFSFNP----------SISMQNPN 384
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/340 (52%), Positives = 208/340 (61%), Gaps = 48/340 (14%)
Query: 1 MADQSQVANKAVGVSTTTCSLESLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWNF 60
+ Q V N+A + + SLDCLLSAT SNS TS EDD+GIS+LFS DC+ LW+F
Sbjct: 71 IQQQQHVGNRASSIDPS-----SLDCLLSAT-SNSNNTSTEDDEGISVLFS-DCQTLWSF 123
Query: 61 GSNSSAVSSGESENNAPNNFARNNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRPG 120
G VSS ESEN N P + + + + +P
Sbjct: 124 G----GVSSAESENREVTNETTTTIKPKSLKRNRGGDGGTTETT--------TTTTTKPK 171
Query: 121 STKRKNIDDHQSEQFHLF------QGGGFKLI-SENPPKAKKPRLDK-RPSSANINFQLQ 172
KR N D F L + GGFKLI EN K+KKPR +K R S+NI+FQ
Sbjct: 172 YVKR-NRGDETGSHFSLLHPQDDSEKGGFKLIYDENQSKSKKPRTEKERGGSSNISFQ-- 228
Query: 173 ASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVA 232
+S+ S EPD EAIA MKEMIYRAAAFRPVN GLE+VEKPKRKNV+ISTDPQTVA
Sbjct: 229 ---HSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVA 285
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHH 292
ARQRRERISE+IRVLQ LVPGG+KMDTASMLDEAANYLKFLR+QVKALEN +P
Sbjct: 286 ARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALEN---LRP---- 338
Query: 293 SMNYPPTNLAFSSLPFNNNSFPV--QTHFSLQNPNHIHRP 330
TNL+FSS P SFP+ + LQNPN IH P
Sbjct: 339 --KLDQTNLSFSSAP----SFPLFHPSFLPLQNPNQIHHP 372
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 180/340 (52%), Positives = 207/340 (60%), Gaps = 48/340 (14%)
Query: 1 MADQSQVANKAVGVSTTTCSLESLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWNF 60
+ Q V N+A + + SLDCLLSAT SNS TS EDD+GIS+LFS DC+ LW+F
Sbjct: 70 IQQQQHVGNRASSIDPS-----SLDCLLSAT-SNSNNTSTEDDEGISVLFS-DCQTLWSF 122
Query: 61 GSNSSAVSSGESENNAPNNFARNNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRPG 120
G VSS ESEN P + + + +P
Sbjct: 123 G----GVSSAESENREITTETTTTIKPKPLKRNRGGDGGTTETTTTTT---------KPK 169
Query: 121 STKRKNIDDHQSEQFHLF------QGGGFKLI-SENPPKAKKPRLDK-RPSSANINFQLQ 172
S KR N D F L + GGFKLI EN K+KKPR +K R S+NI+FQ
Sbjct: 170 SLKR-NRGDETGSHFSLVHPQDDSEKGGFKLIYDENQSKSKKPRTEKERGGSSNISFQ-- 226
Query: 173 ASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVA 232
+S+ S EPD EAIA MKEMIYRAAAFRPVN GLE+VEKPKRKNV+ISTDPQTVA
Sbjct: 227 ---HSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVA 283
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHH 292
ARQRRERISE+IRVLQ LVPGG+KMDTASMLDEAANYLKFLR+QVKALEN K D
Sbjct: 284 ARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENL-RPKLDQ-- 340
Query: 293 SMNYPPTNLAFSSLPFNNNSFPV--QTHFSLQNPNHIHRP 330
TNL+FSS P SFP+ + LQNPN IH P
Sbjct: 341 ------TNLSFSSAP---TSFPLFHPSFLPLQNPNQIHHP 371
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 180/337 (53%), Positives = 206/337 (61%), Gaps = 48/337 (14%)
Query: 4 QSQVANKAVGVSTTTCSLESLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWNFGSN 63
Q V N+A + + SLDCLLSAT SNS TS EDD+GIS+LFS DC+ LW+FG
Sbjct: 102 QQHVGNRASSIDPS-----SLDCLLSAT-SNSNNTSTEDDEGISVLFS-DCQTLWSFG-- 152
Query: 64 SSAVSSGESENNAPNNFARNNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRPGSTK 123
VSS ESEN P + + + +P S K
Sbjct: 153 --GVSSAESENREITTETTTTIKPKPLKRNRGGDGGTTETTTTTT---------KPKSLK 201
Query: 124 RKNIDDHQSEQFHLF------QGGGFKLI-SENPPKAKKPRLDK-RPSSANINFQLQASN 175
R N D F L + GGFKLI EN K+KKPR +K R S+NI+FQ
Sbjct: 202 R-NRGDETGSHFSLVHPQDDSEKGGFKLIYDENQSKSKKPRTEKERGGSSNISFQ----- 255
Query: 176 NSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQ 235
+S+ S EPD EAIA MKEMIYRAAAFRPVN GLE+VEKPKRKNV+ISTDPQTVAARQ
Sbjct: 256 HSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQ 315
Query: 236 RRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMN 295
RRERISE+IRVLQ LVPGG+KMDTASMLDEAANYLKFLR+QVKALEN K D
Sbjct: 316 RRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENL-RPKLDQ----- 369
Query: 296 YPPTNLAFSSLPFNNNSFPV--QTHFSLQNPNHIHRP 330
TNL+FSS P SFP+ + LQNPN IH P
Sbjct: 370 ---TNLSFSSAP---TSFPLFHPSFLPLQNPNQIHHP 400
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 179/340 (52%), Positives = 206/340 (60%), Gaps = 48/340 (14%)
Query: 1 MADQSQVANKAVGVSTTTCSLESLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWNF 60
+ Q V N+A + + SLDCLLSAT SNS TS EDD+GIS+LFS DC+ LW+F
Sbjct: 70 IQQQQHVGNRASSIDPS-----SLDCLLSAT-SNSNNTSTEDDEGISVLFS-DCQTLWSF 122
Query: 61 GSNSSAVSSGESENNAPNNFARNNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRPG 120
G VSS ESEN P + + + +P
Sbjct: 123 G----GVSSAESENREITTETTTTIKPKPLKRNRGGDGGTTETTTTTT---------KPK 169
Query: 121 STKRKNIDDHQSEQFHLF------QGGGFKLI-SENPPKAKKPRLDK-RPSSANINFQLQ 172
S KR N D F L + GGFKLI EN K+KKPR +K R S+NI+FQ
Sbjct: 170 SLKR-NRGDETGSHFSLVHPQDDSEKGGFKLIYDENQSKSKKPRTEKERGGSSNISFQ-- 226
Query: 173 ASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVA 232
+S+ S EPD EAIA MKEMIYRAAAFRPVN GLE+VEKPKRKNV+ISTDPQTVA
Sbjct: 227 ---HSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVA 283
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHH 292
ARQRRERISE+IRVLQ LVPGG+KMDTASMLDEAANY KFLR+QVKALEN K D
Sbjct: 284 ARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYFKFLRAQVKALENL-RPKLDQ-- 340
Query: 293 SMNYPPTNLAFSSLPFNNNSFPV--QTHFSLQNPNHIHRP 330
TNL+FSS P SFP+ + LQNPN IH P
Sbjct: 341 ------TNLSFSSAP---TSFPLFHPSFLPLQNPNQIHHP 371
>gi|449480726|ref|XP_004155978.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH87-like
[Cucumis sativus]
Length = 383
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/273 (58%), Positives = 191/273 (69%), Gaps = 35/273 (12%)
Query: 15 STTTCSLESLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWNFGSNSSAVSSGESEN 74
+ TTCSLESLDCLLSATNSN+ +TS EDD +S++ + D NLWNFG N+ AVSS ESE
Sbjct: 110 TVTTCSLESLDCLLSATNSNT-DTSVEDDGSVSMMLT-DYTNLWNFGGNA-AVSSKESEK 166
Query: 75 NAPNNFARNNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRPGSTKRKNIDDHQSEQ 134
N N+ R+ HE ++ + + I+ N+ D S+
Sbjct: 167 NGSNSTKRS----------HEQTQFKAADYSIFSNNII-------------NLSDSTSDS 203
Query: 135 FHLFQGGGFKLISE-NPPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDPEAIAH 193
GGF++I++ + PK KKPR +K PSS+NINFQ S+ SS +EPDPEAIA
Sbjct: 204 ------GGFRIITDHDLPKQKKPRSEKPPSSSNINFQQSCSSGSSCID--QEPDPEAIAQ 255
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
MKEMIYRAAAFRPVNLGLE++EKPKRKNVRIS+DPQTVAARQRRERISERIRVLQRLVPG
Sbjct: 256 MKEMIYRAAAFRPVNLGLEMIEKPKRKNVRISSDPQTVAARQRRERISERIRVLQRLVPG 315
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALENPGHQ 286
GSKMDTASMLDEAA K L+SQ+KALEN G +
Sbjct: 316 GSKMDTASMLDEAAXLSKVLKSQIKALENLGQK 348
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/105 (78%), Positives = 93/105 (88%), Gaps = 5/105 (4%)
Query: 185 EPDPEAIAHMKEMIYRAAAFRPVNLGLEVV-----EKPKRKNVRISTDPQTVAARQRRER 239
EPD EA+A +KEMIYRAAA RPVNLG EV+ EKP+RKNVRIS+DPQTVAAR RRER
Sbjct: 248 EPDMEAMAQVKEMIYRAAAMRPVNLGPEVIAAAAAEKPRRKNVRISSDPQTVAARLRRER 307
Query: 240 ISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPG 284
+SER+RVLQ+LVPGGSKMDTASMLDEAA+YLKFL+SQV+ALE G
Sbjct: 308 VSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALETLG 352
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/132 (64%), Positives = 104/132 (78%), Gaps = 7/132 (5%)
Query: 160 KRPSSANINFQLQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVV----- 214
KR ++ +I+F + +++ EPD EA+A +KEMIYRAAA RPVNLG E V
Sbjct: 220 KRRAATSISFGGGHVPSCGAAAAGYEPDMEAMAQVKEMIYRAAAMRPVNLGPEAVGAAGA 279
Query: 215 --EKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
E+P+RKNVRIS+DPQTVAAR RRER+SER+RVLQ+LVPGGSKMDTASMLDEAA+YLKF
Sbjct: 280 GAERPRRKNVRISSDPQTVAARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKF 339
Query: 273 LRSQVKALENPG 284
L+SQV+ALE G
Sbjct: 340 LKSQVQALETLG 351
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 95/111 (85%), Gaps = 1/111 (0%)
Query: 173 ASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLE-VVEKPKRKNVRISTDPQTV 231
A N V S+ EPD EA+A +KEMIYRAAA RPV+LG E E+P+R+NVRIS+DPQTV
Sbjct: 301 AGNGGGVEDSMYEPDTEALAQVKEMIYRAAAMRPVSLGSEDAGERPRRRNVRISSDPQTV 360
Query: 232 AARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
AARQRRERISER+RVLQ+LVPGG+KMDTASMLDEAANYL+FL+SQV+ L+
Sbjct: 361 AARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQVRELQT 411
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%), Gaps = 5/136 (3%)
Query: 151 PKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLG 210
P+A R ++ +I F LQ +N++ + E PD EA+A +KEMIYRAAA RPV+L
Sbjct: 205 PRAGTKRKAPATTATSITFGLQDTNSAGAAGGYE-PDMEAMAQVKEMIYRAAAMRPVSLV 263
Query: 211 LEV----VEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEA 266
E + KP+RKNVRIS+DPQTVAAR RRER+S+R+RVLQ+LVPGGSKMDTASMLDEA
Sbjct: 264 TESPAAGISKPRRKNVRISSDPQTVAARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEA 323
Query: 267 ANYLKFLRSQVKALEN 282
A+YLKFL+SQV+ALE
Sbjct: 324 ASYLKFLKSQVQALET 339
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 115/160 (71%), Gaps = 9/160 (5%)
Query: 163 SSANINFQLQASNN-SSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVV-EKPKRK 220
S+ +I F Q ++ + +++ EPD EA+A +KEMIYRAAA RPV+LG E +KP+RK
Sbjct: 218 SATSITFGHQPHHHHAGATTAGYEPDMEAMAQVKEMIYRAAAMRPVHLGTEAAADKPRRK 277
Query: 221 NVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
NVRIS+DPQTVAAR RRER+S+R+RVLQ+LVPGG+KMDTASMLDEAA+YLKFL+SQV+ L
Sbjct: 278 NVRISSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKL 337
Query: 281 ENPGH-----QKPDHHHSMNYPPTN--LAFSSLPFNNNSF 313
E G + P ++S N +N F NNN+
Sbjct: 338 ETLGTTTTTSKLPQQYYSGNINSSNNHHGFLGFAANNNTI 377
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 115/160 (71%), Gaps = 9/160 (5%)
Query: 163 SSANINFQLQASNN-SSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVV-EKPKRK 220
S+ +I F Q ++ + +++ EPD EA+A +KEMIYRAAA RPV+LG E +KP+RK
Sbjct: 219 SATSITFGHQPHHHHAGATTAGYEPDMEAMAQVKEMIYRAAAMRPVHLGTEAAADKPRRK 278
Query: 221 NVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
NVRIS+DPQTVAAR RRER+S+R+RVLQ+LVPGG+KMDTASMLDEAA+YLKFL+SQV+ L
Sbjct: 279 NVRISSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKL 338
Query: 281 ENPGH-----QKPDHHHSMNYPPTN--LAFSSLPFNNNSF 313
E G + P ++S N +N F NNN+
Sbjct: 339 ETLGTTTTTSKLPQQYYSGNINSSNNHHGFLGFAANNNTI 378
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 90/101 (89%), Gaps = 1/101 (0%)
Query: 183 IEEPDPEAIAHMKEMIYRAAAFRPVNLGLE-VVEKPKRKNVRISTDPQTVAARQRRERIS 241
+ EPD EAIA +KEMIYRAAA RPV LG E E+P+R+NVRIS+DPQTVAARQRRERIS
Sbjct: 328 LYEPDTEAIAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERIS 387
Query: 242 ERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
ER+RVLQ+LVPGG+KMDTASMLDEAANYL+FL+SQ++ L+
Sbjct: 388 ERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 428
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 90/101 (89%), Gaps = 1/101 (0%)
Query: 183 IEEPDPEAIAHMKEMIYRAAAFRPVNLGLE-VVEKPKRKNVRISTDPQTVAARQRRERIS 241
+ EPD EA+A +KEMIYRAAA RPV LG E E+P+R+NVRIS+DPQTVAARQRRERIS
Sbjct: 340 LYEPDTEALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERIS 399
Query: 242 ERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
ER+RVLQ+LVPGG+KMDTASMLDEAANYL+FL+SQ++ L+
Sbjct: 400 ERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 440
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 90/101 (89%), Gaps = 1/101 (0%)
Query: 183 IEEPDPEAIAHMKEMIYRAAAFRPVNLGLE-VVEKPKRKNVRISTDPQTVAARQRRERIS 241
+ EPD EA+A +KEMIYRAAA RPV LG E E+P+R+NVRIS+DPQTVAARQRRERIS
Sbjct: 324 LYEPDTEALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERIS 383
Query: 242 ERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
ER+RVLQ+LVPGG+KMDTASMLDEAANYL+FL+SQ++ L+
Sbjct: 384 ERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 424
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 90/101 (89%), Gaps = 1/101 (0%)
Query: 183 IEEPDPEAIAHMKEMIYRAAAFRPVNLGLE-VVEKPKRKNVRISTDPQTVAARQRRERIS 241
+ EPD EA+A +KEMIYRAAA RPV LG E E+P+R+NVRIS+DPQTVAARQRRERIS
Sbjct: 328 LYEPDTEALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRERIS 387
Query: 242 ERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
ER+RVLQ+LVPGG+KMDTASMLDEAANYL+FL+SQ++ L+
Sbjct: 388 ERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 428
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/111 (69%), Positives = 94/111 (84%), Gaps = 2/111 (1%)
Query: 174 SNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLE--VVEKPKRKNVRISTDPQTV 231
+N V + EPD EA+A +KEMIYRAAA RPV+LG E E+P+R+NVRIS+DPQTV
Sbjct: 268 TNCGGVDDPMYEPDTEALAQVKEMIYRAAAMRPVSLGSEEDAGERPRRRNVRISSDPQTV 327
Query: 232 AARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
AARQRRERISER+RVLQ+LVPGG+KMDTASMLDEAA+YL+FL+SQV+ L+
Sbjct: 328 AARQRRERISERLRVLQKLVPGGAKMDTASMLDEAASYLRFLQSQVRELQT 378
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 88/103 (85%), Gaps = 5/103 (4%)
Query: 185 EPDPEAIAHMKEMIYRAAAFRPVNL-----GLEVVEKPKRKNVRISTDPQTVAARQRRER 239
EPD EA+A +KEMIYRAAA RPV+L G KP+RKNVRIS+DPQTVAAR RRER
Sbjct: 240 EPDVEAMAQVKEMIYRAAAMRPVSLVTAEAGAAASAKPRRKNVRISSDPQTVAARLRRER 299
Query: 240 ISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
+S+R+RVLQ+LVPGGSKMDTASMLDEAA+YLKFLRSQV+ALE
Sbjct: 300 VSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLRSQVQALET 342
>gi|449458249|ref|XP_004146860.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/152 (57%), Positives = 110/152 (72%), Gaps = 8/152 (5%)
Query: 141 GGFKLISEN-PPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDP-----EAIAHM 194
GGF I EN P + ++ +PSS N + + S SS+IEE + + ++ M
Sbjct: 101 GGFLDILENQKPNQQNTIIENQPSSTNST--TLSPSPSPSSSNIEEIEQAVDRDQVVSQM 158
Query: 195 KEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGG 254
KE IY AA FRPVNLGLE VEK +RKNV++S +PQTVAAR+RRE+ISE+IRVLQRLVPGG
Sbjct: 159 KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGG 218
Query: 255 SKMDTASMLDEAANYLKFLRSQVKALENPGHQ 286
SKMD SMLDEAA+YLKFLR+Q+KALE ++
Sbjct: 219 SKMDIGSMLDEAASYLKFLRAQIKALEGLTYK 250
>gi|449476926|ref|XP_004154878.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/152 (57%), Positives = 110/152 (72%), Gaps = 8/152 (5%)
Query: 141 GGFKLISEN-PPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDP-----EAIAHM 194
GGF I EN P + ++ +PSS N + + S SS+IEE + + ++ M
Sbjct: 101 GGFLDILENQKPNQQNTIIENQPSSTNST--TLSPSPSPSSSNIEEIEQAVDRDQVVSQM 158
Query: 195 KEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGG 254
KE IY AA FRPVNLGLE VEK +RKNV++S +PQTVAAR+RRE+ISE+IRVLQRLVPGG
Sbjct: 159 KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGG 218
Query: 255 SKMDTASMLDEAANYLKFLRSQVKALENPGHQ 286
SKMD SMLDEAA+YLKFLR+Q+KALE ++
Sbjct: 219 SKMDIGSMLDEAASYLKFLRAQIKALEGLTYK 250
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/122 (65%), Positives = 92/122 (75%), Gaps = 9/122 (7%)
Query: 185 EPDPEAIAHMKEMIYRAAAFRPV-----NLGLEVV----EKPKRKNVRISTDPQTVAARQ 235
EPD EA+A +KEMIYRAAA RPV G E KP+RKNVRIS+DPQTVAAR
Sbjct: 242 EPDSEALAQVKEMIYRAAAMRPVHQLVCGAGTEPAPSSQSKPRRKNVRISSDPQTVAARL 301
Query: 236 RRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMN 295
RRER+SER+RVLQRLVPGGS+MDTASMLDEAA+YLKFL++QVKALE +H+S
Sbjct: 302 RRERVSERLRVLQRLVPGGSRMDTASMLDEAASYLKFLKTQVKALERANPSNGGYHNSSL 361
Query: 296 YP 297
P
Sbjct: 362 LP 363
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 88/110 (80%), Gaps = 12/110 (10%)
Query: 185 EPDPEAIAHMKEMIYRAAAFRPVNLGLEVV------------EKPKRKNVRISTDPQTVA 232
EPD EAIA +KEMIYRAAA RPV LG ++P+RKNVRIS+DPQTVA
Sbjct: 224 EPDTEAIAQVKEMIYRAAAMRPVTLGGAASASDPSFAAPQPPQRPRRKNVRISSDPQTVA 283
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
AR RRER+SER+RVLQRLVPGGSKMDTA+MLDEAA+YLKFL+SQ++ALE
Sbjct: 284 ARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 333
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/107 (72%), Positives = 87/107 (81%), Gaps = 10/107 (9%)
Query: 185 EPDPEAIAHMKEMIYRAAAFRPVN---LGLEVVE-------KPKRKNVRISTDPQTVAAR 234
EPD EAIA +KEMIYRAAA RPV+ G E KP+R+NVRIS+DPQTVAAR
Sbjct: 236 EPDSEAIAQVKEMIYRAAAMRPVHQLVCGAAGGEPPSSSQNKPRRRNVRISSDPQTVAAR 295
Query: 235 QRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
RRER+SER+RVLQRLVPGGS+MDTASMLDEAA YLKFL+SQVKALE
Sbjct: 296 LRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKALE 342
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/107 (72%), Positives = 87/107 (81%), Gaps = 10/107 (9%)
Query: 185 EPDPEAIAHMKEMIYRAAAFRPVN---LGLEVVE-------KPKRKNVRISTDPQTVAAR 234
EPD EAIA +KEMIYRAAA RPV+ G E KP+R+NVRIS+DPQTVAAR
Sbjct: 237 EPDSEAIAQVKEMIYRAAAMRPVHQLVCGAAGGEPPSSSQNKPRRRNVRISSDPQTVAAR 296
Query: 235 QRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
RRER+SER+RVLQRLVPGGS+MDTASMLDEAA YLKFL+SQVKALE
Sbjct: 297 LRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKALE 343
>gi|414881477|tpg|DAA58608.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 481
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 89/106 (83%), Gaps = 6/106 (5%)
Query: 183 IEEPDPEAIAHMKEMIYRAAAFRPVNLGLE------VVEKPKRKNVRISTDPQTVAARQR 236
+ EPD EA+A +KEMIYRAAA RPV+LG E P+R+NVRIS+DPQTVAARQR
Sbjct: 325 VYEPDTEALAQVKEMIYRAAAMRPVSLGSEDDAGAGAERPPRRRNVRISSDPQTVAARQR 384
Query: 237 RERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
RERIS+R+RVLQ+LVPGG+KMDTASMLDEAA+YL+FL+SQV+ L+
Sbjct: 385 RERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRDLQT 430
>gi|357130303|ref|XP_003566789.1| PREDICTED: uncharacterized protein LOC100831535 [Brachypodium
distachyon]
Length = 455
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 86/105 (81%), Gaps = 7/105 (6%)
Query: 185 EPDPEAIAHMKEMIYRAAAFRPVNLGL-------EVVEKPKRKNVRISTDPQTVAARQRR 237
EPD EA+A +KEMIYRAAA RPV LG E P R+NVRIS+DPQTVAARQRR
Sbjct: 292 EPDTEALAQVKEMIYRAAAMRPVTLGCNGGDEDTERAPAPGRRNVRISSDPQTVAARQRR 351
Query: 238 ERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
ERISER+RVLQRLVPGG+KMDTASMLDEAA+YL+FL++Q++ L+
Sbjct: 352 ERISERLRVLQRLVPGGAKMDTASMLDEAASYLRFLKAQIRDLQT 396
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 88/110 (80%), Gaps = 12/110 (10%)
Query: 185 EPDPEAIAHMKEMIYRAAAFRPVNLG------------LEVVEKPKRKNVRISTDPQTVA 232
EPD EAIA +KEMIYRAAA RPV LG ++P+RKNVRIS+DPQTVA
Sbjct: 180 EPDTEAIAQVKEMIYRAAAMRPVTLGGAASASDPSSAAPPPPQRPRRKNVRISSDPQTVA 239
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
AR RRER+SER+RVLQRLVPGGSKMDTA+MLDEAA+YLKFL+SQ++ALE
Sbjct: 240 ARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 289
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 87/110 (79%), Gaps = 12/110 (10%)
Query: 185 EPDPEAIAHMKEMIYRAAAFRPVNLG------------LEVVEKPKRKNVRISTDPQTVA 232
EPD EAIA +KEM+YRAA RPV LG ++P+RKNVRIS+DPQTVA
Sbjct: 250 EPDTEAIAQVKEMVYRAAPMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVA 309
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
AR RRER+SER+RVLQRLVPGGSKMDTA+MLDEAA+YLKFL+SQ++ALE
Sbjct: 310 ARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 359
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 87/110 (79%), Gaps = 12/110 (10%)
Query: 185 EPDPEAIAHMKEMIYRAAAFRPVNLG------------LEVVEKPKRKNVRISTDPQTVA 232
EPD EAIA +KEM+YRAA RPV LG ++P+RKNVRIS+DPQTVA
Sbjct: 252 EPDTEAIAQVKEMVYRAAPMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVA 311
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
AR RRER+SER+RVLQRLVPGGSKMDTA+MLDEAA+YLKFL+SQ++ALE
Sbjct: 312 ARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 361
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 80/98 (81%)
Query: 189 EAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQ 248
E + MKEM+YR AA +PV++ V+KP+R+NVRIS DPQ+VAAR RRERISER+RVLQ
Sbjct: 124 EELGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISERVRVLQ 183
Query: 249 RLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQ 286
RLVPGG+KMDTASMLDEA Y+KFL+ QV+ L + G Q
Sbjct: 184 RLVPGGTKMDTASMLDEAIRYIKFLKRQVQELHSAGGQ 221
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 93/127 (73%), Gaps = 3/127 (2%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R AA +PV++ E V+ PKR+NV+IS DPQ+VAAR RRERISE+IR+LQR
Sbjct: 117 SMAAMREMIFRIAAMQPVHIDPESVKPPKRRNVKISKDPQSVAARHRRERISEKIRILQR 176
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMNYPPTNLAFSSLPFN 309
LVPGG+KMDTASMLDEA +Y+KFL++QV++LE +P + +P T S LP
Sbjct: 177 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPA---GIGFPVTMSNGSYLPIT 233
Query: 310 NNSFPVQ 316
P Q
Sbjct: 234 KQYQPSQ 240
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 92/116 (79%), Gaps = 2/116 (1%)
Query: 174 SNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAA 233
SN +S SSIE+ +P A +++M +R AA +P+++ E V+ PKR+NV+IS DPQ+VAA
Sbjct: 115 SNANSFLSSIEKKNP--TAEIRDMTFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAA 172
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPD 289
R RRERISER+R+LQRLVPGG+KMDTASMLDEA +Y+KFL+ QV++LE G P+
Sbjct: 173 RHRRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEQAGANTPN 228
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 82/99 (82%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R A +P+++ E ++ PKR+NV+IS DPQ+VAAR RRERISERI++LQR
Sbjct: 102 SVAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIKILQR 161
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
LVPGG+KMDTASMLDEA +Y+KFL+ QV+ LE G +P
Sbjct: 162 LVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRP 200
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 78/93 (83%)
Query: 189 EAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQ 248
E + MKEM+YR AA +PV++ V+KP+R+NVRIS DPQ+VAAR RRERISER+RVLQ
Sbjct: 124 EELGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISERVRVLQ 183
Query: 249 RLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
RLVPGG+KMDTASMLDEA Y+KFL+ QV+ L+
Sbjct: 184 RLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 216
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 78/93 (83%)
Query: 189 EAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQ 248
E + MKEM+YR AA +PV++ V+KP+R+NVRIS DPQ+VAAR RRERISER+RVLQ
Sbjct: 123 EELGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISERVRVLQ 182
Query: 249 RLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
RLVPGG+KMDTASMLDEA Y+KFL+ QV+ L+
Sbjct: 183 RLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 215
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 85/110 (77%), Gaps = 5/110 (4%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+ MKEM+Y+ A +PV++ + KPKRKNVRIS DPQ+VAAR RRERISE+IR+LQRL
Sbjct: 98 LGAMKEMMYKIAVMQPVDIDPAAIRKPKRKNVRISDDPQSVAARHRRERISEKIRILQRL 157
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALEN-PGHQKPDHHHSMNYPPT 299
VPGG+KMDTASMLDEA +Y+KFL+ Q++ L++ P Q HH + PPT
Sbjct: 158 VPGGTKMDTASMLDEAIHYVKFLKRQIRLLQSTPNSQ----HHQQHPPPT 203
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 85/115 (73%), Gaps = 8/115 (6%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+ MKEM+Y+ AA +PV++ + KPKR+NVRIS DPQ+VAAR RRERISE+IR+LQRL
Sbjct: 110 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 169
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMNYPPTNLAFSS 305
VPGG+KMDTASMLDEA Y+KFL+ Q++ L++ H + PP + F++
Sbjct: 170 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSISHP--------SQPPQCIGFAT 216
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 78/94 (82%)
Query: 189 EAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQ 248
E + MKEM+YR AA +PV++ V+KP+R+NVRIS DPQ+V AR RRERISER+RVLQ
Sbjct: 124 EELGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVVARHRRERISERVRVLQ 183
Query: 249 RLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
RLVPGG+KMDTASMLDEA Y+KFL+ QV+ L++
Sbjct: 184 RLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQH 217
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 92/142 (64%), Gaps = 16/142 (11%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+ MKEM+Y+ AA +PV++ + KPKR+NVRIS DPQ+VAAR RRERISE+IR+LQRL
Sbjct: 102 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 161
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALEN---PGHQKPD---------HHHSMNYPP 298
VPGG+KMDTASMLDEA Y+KFL+ Q++ L++ P Q P H ++ P
Sbjct: 162 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSIPQPSRQPPQCIGVASTTPHASTLLLAP 221
Query: 299 TNLAFSSLPFNNNSFPVQTHFS 320
+ S PF N P T S
Sbjct: 222 S----SDWPFAPNVLPRSTAVS 239
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 78/93 (83%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
+A M+EMI+R AA +PV + E ++ PKR+NVRIS DPQ+VAAR RRERIS++IR+LQR
Sbjct: 78 GMAAMREMIFRIAAMQPVEIDPEAIKAPKRRNVRISKDPQSVAARHRRERISQKIRILQR 137
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
LVPGG+KMDTASMLDEA +Y+KFL+ QV+ LE
Sbjct: 138 LVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQ 170
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 81/92 (88%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R AA +P+ + E V+ PKR+NV+IS DPQ++AAR RRERISE+IR+LQR
Sbjct: 143 SMAAMREMIFRIAAMQPIYIDPESVKPPKRRNVKISKDPQSIAARHRRERISEKIRILQR 202
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
+VPGG+KMDTASMLDEA +Y+KFL++Q+K+L+
Sbjct: 203 MVPGGTKMDTASMLDEAIHYVKFLKTQLKSLQ 234
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 82/103 (79%), Gaps = 11/103 (10%)
Query: 185 EPDPEAIAHMKEMIYRAAAFRPV------NLGLEVVE----KPKR-KNVRISTDPQTVAA 233
EPD EAIA +KEMIYRAAA RP+ + G E KP+R KNVRIS+DPQTVAA
Sbjct: 250 EPDTEAIAQVKEMIYRAAAMRPLPSLTGASAGDPTHEPSPSKPRRRKNVRISSDPQTVAA 309
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQ 276
R RRE++SER+R LQRLVPGGSKMDTASMLDEAA+YLKFL+SQ
Sbjct: 310 RLRREKVSERLRALQRLVPGGSKMDTASMLDEAASYLKFLKSQ 352
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 77/92 (83%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+ MKEM+Y+ AA +PV++ + KPKR+NVRIS DPQ+VAAR RRERISE+IR+LQRL
Sbjct: 87 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISEDPQSVAARHRRERISEKIRILQRL 146
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
VPGG+KMDTASMLDEA Y+KFL+ Q+K L++
Sbjct: 147 VPGGTKMDTASMLDEAIRYVKFLKRQIKLLQS 178
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 77/92 (83%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+ MKEM+Y+ AA +PV++ + KPKR+NVRIS DPQ+VAAR RRERISE+IR+LQRL
Sbjct: 97 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 156
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
VPGG+KMDTASMLDEA Y+KFL+ Q++ L++
Sbjct: 157 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQS 188
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 85/123 (69%), Gaps = 7/123 (5%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+ MKEM+YR AA +PV + + KPKR+NVRIS DPQ+VAAR RRERISE+IR+LQRL
Sbjct: 77 LGAMKEMMYRIAAMQPVEIDPATIRKPKRRNVRISDDPQSVAARLRRERISEKIRILQRL 136
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMNYPPTNLAFSSLPFNN 310
VPGG KMDTASML+EA Y+KFL+ Q++ L+ +HH + P T +P++N
Sbjct: 137 VPGGRKMDTASMLEEAIRYVKFLKRQIRLLQ-------PNHHQQHQPCTTNGDWQIPYSN 189
Query: 311 NSF 313
Sbjct: 190 KPL 192
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 78/95 (82%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
MKEM+Y+ AA +PV++ + KPKR+NVRIS DPQ+VAAR RRERISE+IR+LQRLVPG
Sbjct: 64 MKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPG 123
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
G+KMDTASMLDEA Y+KFL+ Q++ L++ H P
Sbjct: 124 GTKMDTASMLDEAIRYVKFLKRQIRQLQSNHHPLP 158
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 78/95 (82%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
MKEM+Y+ AA +PV++ + KPKR+NVRIS DPQ+VAAR RRERISE+IR+LQRLVPG
Sbjct: 1 MKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPG 60
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
G+KMDTASMLDEA Y+KFL+ Q++ L++ H P
Sbjct: 61 GTKMDTASMLDEAIRYVKFLKRQIRQLQSNHHPLP 95
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 159 DKRPSSANINFQLQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPK 218
D++ +++ +F + S SS + EE E + MKEM+Y+ AA +PV++ + KPK
Sbjct: 50 DQQLPTSSTHFVIGYSTPSSGTGDDEEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKPK 109
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R+NVRIS DPQ++AAR RRERISE+IR+LQRLVPGG+KMDTASMLDEA Y+KFL+ Q++
Sbjct: 110 RRNVRISDDPQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 169
Query: 279 AL 280
L
Sbjct: 170 LL 171
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 76/91 (83%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+ MKEM+++ AA +PVN+ + KPKR+NVRIS DPQ+VAAR RRERISE+IR+LQRL
Sbjct: 71 LGAMKEMMFKIAAMQPVNIDPATIYKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 130
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
VPGG+KMDTASMLDEA Y+KFL+ Q++ L+
Sbjct: 131 VPGGTKMDTASMLDEAIRYVKFLKKQIRLLQ 161
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
MKEM+Y+ A +PV++ V KPKR+NVRIS DPQ+VAAR RRERISE+IR+LQRLVPG
Sbjct: 85 MKEMMYKMAVMQPVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPG 144
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALE 281
G+KMDTASMLDEA Y+KFL+ Q++ L+
Sbjct: 145 GTKMDTASMLDEAILYVKFLKRQIRLLQ 172
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 75/89 (84%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
MKEM+Y+ A +PV++ V KPKR+NVRIS DPQ+VAAR RRERISE+IR+LQRLVPG
Sbjct: 94 MKEMMYKMAVMQPVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPG 153
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALEN 282
G+KMDTASMLDEA Y+KFL+ Q++ L++
Sbjct: 154 GTKMDTASMLDEAIRYVKFLKRQIRFLQS 182
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 79/95 (83%), Gaps = 7/95 (7%)
Query: 191 IAHMKEMIYRAAAFRPVN----LGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRV 246
+A+M+E +YR A +RP+ LG KPKR+NVRIS+DPQTVAAR RRERIS +IR+
Sbjct: 255 MANMRETLYRMAVWRPITATDCLG---GSKPKRRNVRISSDPQTVAARHRRERISTKIRI 311
Query: 247 LQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
LQRLVPGG+KMDTASMLDEA +Y+K+L+SQV+A+E
Sbjct: 312 LQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAME 346
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 75/89 (84%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
MKEM+Y+ AA +PV++ + +PKR+NVRIS DP +VAAR RRERISE+IR+LQRLVPG
Sbjct: 69 MKEMMYKIAAMQPVDIDPATIRRPKRRNVRISDDPASVAARHRRERISEKIRILQRLVPG 128
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALEN 282
G+KMDTASMLDEA Y+KFL+ Q++ L++
Sbjct: 129 GTKMDTASMLDEAIRYVKFLKRQIRLLQS 157
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 130 bits (327), Expect = 9e-28, Method: Composition-based stats.
Identities = 67/103 (65%), Positives = 84/103 (81%), Gaps = 2/103 (1%)
Query: 184 EEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISER 243
+EP+ E + MKEM+YR AA +PV++ + KPKRKNVRIS DPQ+VAAR RRERISE+
Sbjct: 1 DEPE-EELGAMKEMMYRVAAMQPVDIDPATIHKPKRKNVRISDDPQSVAARLRRERISEK 59
Query: 244 IRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQ 286
IR+LQRLVPGG KMDTASMLDEA Y+KFL+ Q+++L+ P HQ
Sbjct: 60 IRILQRLVPGGRKMDTASMLDEAIRYVKFLKRQIRSLQ-PNHQ 101
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 76/92 (82%), Gaps = 7/92 (7%)
Query: 194 MKEMIYRAAAFRPVN----LGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
M+E +YR A +RP+ LG KPKR+NVRIS+DPQTVAAR RRERIS +IR+LQR
Sbjct: 259 MRETLYRMAVWRPITATDCLG---GSKPKRRNVRISSDPQTVAARHRRERISTKIRILQR 315
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
LVPGG+KMDTASMLDEA +Y+K+L+SQV+A+E
Sbjct: 316 LVPGGTKMDTASMLDEAIHYVKYLKSQVQAME 347
>gi|147768917|emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]
Length = 282
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 76/87 (87%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R AA +PV++ E V+ PKR+NV+IS DPQ+VAAR RRERISE+IR+LQR
Sbjct: 70 SMAAMREMIFRIAAMQPVHIDPESVKPPKRRNVKISKDPQSVAARHRRERISEKIRILQR 129
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQ 276
LVPGG+KMDTASMLDEA +Y+ FL++Q
Sbjct: 130 LVPGGTKMDTASMLDEAIHYVXFLKTQ 156
>gi|237692500|gb|ACR15952.1| INDEHISCENT [Lepidium campestre]
gi|342298436|emb|CBY05408.1| INDEHISCENT-like protein [Lepidium campestre]
Length = 176
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 90/145 (62%), Gaps = 24/145 (16%)
Query: 183 IEEPDPEAIAHM---------------KEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTD 227
I +P PE + H+ KEM Y AA +PV++ V KP R+NVRIS D
Sbjct: 39 ILDPTPETLIHLEEADEEDEDEDMDAMKEMQYMIAAMQPVDIDPATVPKPNRRNVRISDD 98
Query: 228 PQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
PQTV AR+RRERISE+IR+L+R+VPGG+KMDTASMLDEA Y KFL+ QV+ L+
Sbjct: 99 PQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQP----- 153
Query: 288 PDHHHSMNYPPTNLAFSSLPFNNNS 312
HS PPT+ + L + +NS
Sbjct: 154 ----HSHLGPPTSTSDPYLCYYHNS 174
>gi|342298424|emb|CBY05402.1| INDEHISCENT-like protein [Lepidium appelianum]
Length = 172
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 89/142 (62%), Gaps = 19/142 (13%)
Query: 183 IEEPDPEAIAH----------MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVA 232
I +P PE + H MKEM Y AA +PV++ V KP R+NVRIS DPQT
Sbjct: 40 ILDPTPETLIHLEEEDEDMDAMKEMQYMIAAMQPVDIDPATVPKPYRRNVRISDDPQTGV 99
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHH 292
AR+RRERISE+IR+L+R+VPGG+KMD+ASMLDEA Y KFL+ QV+ L+ H
Sbjct: 100 ARRRRERISEKIRILKRIVPGGAKMDSASMLDEAIRYTKFLKRQVRMLQP---------H 150
Query: 293 SMNYPPTNLAFSSLPFNNNSFP 314
S PPT+ L + +NS P
Sbjct: 151 SHLGPPTSAYDPCLCYYHNSQP 172
>gi|15236714|ref|NP_191923.1| transcription factor IND [Arabidopsis thaliana]
gi|209572742|sp|O81313.3|IND_ARATH RecName: Full=Transcription factor IND; AltName: Full=Basic
helix-loop-helix protein 40; Short=AtbHLH40; Short=bHLH
40; AltName: Full=Protein INDEHISCENT; AltName:
Full=Transcription factor EN 120; AltName: Full=bHLH
transcription factor bHLH040
gi|3193315|gb|AAC19297.1| contains similarity to transcriptional activator Ra [Arabidopsis
thaliana]
gi|7267099|emb|CAB80770.1| hypothetical protein [Arabidopsis thaliana]
gi|117958473|gb|ABK59672.1| At4g00120 [Arabidopsis thaliana]
gi|332656425|gb|AEE81825.1| transcription factor IND [Arabidopsis thaliana]
Length = 198
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 76/110 (69%), Gaps = 13/110 (11%)
Query: 185 EPDPEAIAH-------------MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTV 231
+P PE + H MKEM Y A +PV++ V KP R+NVRIS DPQTV
Sbjct: 66 DPPPETLIHLDEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTV 125
Query: 232 AARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
AR+RRERISE+IR+L+R+VPGG+KMDTASMLDEA Y KFL+ QV+ L+
Sbjct: 126 VARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
>gi|342298444|emb|CBY05412.1| INDEHISCENT-like protein [Aethionema carneum]
Length = 176
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 89/147 (60%), Gaps = 24/147 (16%)
Query: 183 IEEPDPEAIAHM---------------KEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTD 227
I +P PE + H+ KEM Y AA +PV++ V KP R+NVRIS D
Sbjct: 39 ILDPTPETLIHLEEADEEDEDEDMDAMKEMQYMIAAMQPVDIDPATVPKPYRRNVRISDD 98
Query: 228 PQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
PQTV A +RRERISE+IR+L+R+VPGG+KMD+ASMLDEA Y KFL+ QV+ L+
Sbjct: 99 PQTVVAXRRRERISEKIRILKRIVPGGAKMDSASMLDEAIRYTKFLKRQVRMLQP----- 153
Query: 288 PDHHHSMNYPPTNLAFSSLPFNNNSFP 314
HS PPT+ L + +NS P
Sbjct: 154 ----HSHLGPPTSAYDPCLCYYHNSQP 176
>gi|297810171|ref|XP_002872969.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
gi|297318806|gb|EFH49228.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 13/110 (11%)
Query: 185 EPDPEAIAH-------------MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTV 231
+P PE + H MKEM Y A +PV++ V KP R+NV+IS DPQTV
Sbjct: 65 DPPPETLIHLEEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVKISDDPQTV 124
Query: 232 AARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
AR+RRERISE+IR+L+R+VPGG+KMDTASMLDEA Y KFL+ QV+ L+
Sbjct: 125 VARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 174
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 88/120 (73%), Gaps = 5/120 (4%)
Query: 171 LQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVE-KPKRKNVRISTDPQ 229
L++S N +S + D + A M+ +++R A+ +PV E+ +PKR+NVRIS DPQ
Sbjct: 388 LRSSGNCGAASPV---DLDEFASMRAILFRHAS-QPVPSLEEIASSRPKRRNVRISKDPQ 443
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPD 289
+VAAR RRERIS+RIRVLQRLVPGG+KMDTASMLDEA +Y+KFL+ Q++ LE G+ D
Sbjct: 444 SVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQTLEQIGNNGCD 503
>gi|288901045|gb|ADC68235.1| bHLH transcription factor [Brassica rapa subsp. pekinensis]
Length = 171
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 69/85 (81%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
MK+M Y AA +PV+L V KP R+NVR+S DPQTV AR+RRERISE+IR+L+R+VPG
Sbjct: 73 MKKMQYAIAAMQPVDLDPATVPKPNRRNVRVSDDPQTVVARRRRERISEKIRILKRMVPG 132
Query: 254 GSKMDTASMLDEAANYLKFLRSQVK 278
G+KMDTASMLDEA Y KFL+ QV+
Sbjct: 133 GAKMDTASMLDEAIRYTKFLKRQVR 157
>gi|242081721|ref|XP_002445629.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
gi|241941979|gb|EES15124.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
Length = 269
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 80/88 (90%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
M+EMI+R AA +PVN+ E+V PKR+NVRISTDPQ+VAAR RRERISERIR+LQRLVPG
Sbjct: 148 MREMIFRVAALQPVNIDPEMVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLVPG 207
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALE 281
G+KMDTASMLDEA +Y+KFL++QV++LE
Sbjct: 208 GTKMDTASMLDEAIHYVKFLKTQVQSLE 235
>gi|413921862|gb|AFW61794.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 80/88 (90%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
M+EMI+R AA +PVN+ E+V PKR+NVRISTDPQ+VAAR RRERISERIR+LQRLVPG
Sbjct: 129 MREMIFRVAALQPVNIDPEMVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLVPG 188
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALE 281
G+KMDTASMLDEA +Y+KFL++QV++LE
Sbjct: 189 GTKMDTASMLDEAIHYVKFLKTQVQSLE 216
>gi|356496900|ref|XP_003517303.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 251
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 87/107 (81%), Gaps = 3/107 (2%)
Query: 185 EPDPE---AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERIS 241
EP+PE ++A M+EMI+R A +PV++ E ++ PKR+NV+IS DPQ+VAAR RRERIS
Sbjct: 103 EPNPEKKNSVAAMREMIFRVAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERIS 162
Query: 242 ERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
ERIR+LQRLVPGG+KMDTASMLDEA +Y+KFL+ QV+ LE G +P
Sbjct: 163 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGATRP 209
>gi|357141633|ref|XP_003572294.1| PREDICTED: uncharacterized protein LOC100835736 [Brachypodium
distachyon]
Length = 252
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 80/90 (88%)
Query: 192 AHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLV 251
A M+EMI+R AA +PVN+ E V PKR+NVRISTDPQ+VAAR RRERISERIR+LQRLV
Sbjct: 133 AAMREMIFRIAALQPVNIDPETVRPPKRRNVRISTDPQSVAARVRRERISERIRILQRLV 192
Query: 252 PGGSKMDTASMLDEAANYLKFLRSQVKALE 281
PGG+KMDTASMLDEA +Y+KFL++QV++LE
Sbjct: 193 PGGTKMDTASMLDEAIHYVKFLKTQVQSLE 222
>gi|224137546|ref|XP_002327153.1| predicted protein [Populus trichocarpa]
gi|222835468|gb|EEE73903.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 91/118 (77%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R AA +P+++ E V+ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 124 SMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 183
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMNYPPTNLAFSSLP 307
LVPGG+KMDTASMLDEA +Y+KFL++QV++LE +P + +P + S LP
Sbjct: 184 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAQANRPTATTGIGFPVAMTSGSYLP 241
>gi|357482887|ref|XP_003611730.1| Transcription factor HEC2 [Medicago truncatula]
gi|355513065|gb|AES94688.1| Transcription factor HEC2 [Medicago truncatula]
Length = 247
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 90/114 (78%), Gaps = 3/114 (2%)
Query: 175 NNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAAR 234
NNSS+S ++ +++ M+EMI+R A +P+N+ E ++ PKRKNV+IS DPQ+VAAR
Sbjct: 97 NNSSLSYPEKK---NSMSAMREMIFRMAVMQPINIDPETIKPPKRKNVKISKDPQSVAAR 153
Query: 235 QRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
RRERISERIR+LQRLVPGG+KMDTASMLDEA +Y+KFL+ QV+ LE G +P
Sbjct: 154 HRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQVGANRP 207
>gi|288901043|gb|ADC68234.1| bHLH transcription factor [Brassica oleracea]
Length = 180
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 67/83 (80%)
Query: 199 YRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMD 258
Y AA +PV++ V KP R+NVR+S DPQTV AR+RRERISE+IR+L+R+VPGG+KMD
Sbjct: 75 YAIAAMQPVDIDPATVPKPNRRNVRVSEDPQTVVARRRRERISEKIRILKRMVPGGAKMD 134
Query: 259 TASMLDEAANYLKFLRSQVKALE 281
TASMLDEA Y KFL+ QV+ L+
Sbjct: 135 TASMLDEAIRYTKFLKRQVRLLQ 157
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 74/103 (71%)
Query: 187 DPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRV 246
D + A M+ +++R A+ L +PKR+NVRIS D Q+VAAR RRERIS+RIRV
Sbjct: 332 DLDNFARMQAILFRQASQLIPTLEDIASSRPKRRNVRISIDTQSVAARHRRERISDRIRV 391
Query: 247 LQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPD 289
LQRLVPGG+KMDTASMLDEA +Y+KFL+ Q++ LE G D
Sbjct: 392 LQRLVPGGTKMDTASMLDEAIHYIKFLKQQLQTLEQLGIDGCD 434
>gi|414869866|tpg|DAA48423.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 79/88 (89%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
M+EM++R AA +PVN+ E+V PKR+N RISTDPQ+VAAR RRERISERIRVLQRLVPG
Sbjct: 135 MREMVFRVAALQPVNIEPEMVRPPKRRNARISTDPQSVAARVRRERISERIRVLQRLVPG 194
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALE 281
G+KMDTASMLDEA +Y+KFL++QV++LE
Sbjct: 195 GTKMDTASMLDEAIHYVKFLKTQVQSLE 222
>gi|42408644|dbj|BAD09865.1| bHLH protein family-like [Oryza sativa Japonica Group]
gi|125561863|gb|EAZ07311.1| hypothetical protein OsI_29558 [Oryza sativa Indica Group]
gi|125603724|gb|EAZ43049.1| hypothetical protein OsJ_27638 [Oryza sativa Japonica Group]
Length = 246
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 79/90 (87%)
Query: 192 AHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLV 251
A M+EMI+ AA +PVN+ E V PKR+NVRISTDPQ+VAAR RRERISERIR+LQRLV
Sbjct: 125 AAMREMIFHIAALQPVNIDPETVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLV 184
Query: 252 PGGSKMDTASMLDEAANYLKFLRSQVKALE 281
PGG+KMDTASMLDEA +Y+KFL++QV++LE
Sbjct: 185 PGGTKMDTASMLDEAIHYVKFLKTQVQSLE 214
>gi|449447251|ref|XP_004141382.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524104|ref|XP_004169063.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 238
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 82/92 (89%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R A +P+++ E V+ PKR+NV+ISTDPQ+VAAR RRERISERIR+LQR
Sbjct: 107 SVAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 166
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
LVPGG+KMDTASMLDEA +Y+KFL++QV++LE
Sbjct: 167 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 198
>gi|224084350|ref|XP_002307268.1| predicted protein [Populus trichocarpa]
gi|222856717|gb|EEE94264.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 91/115 (79%), Gaps = 2/115 (1%)
Query: 174 SNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAA 233
SN +S SSIE+ + + ++EMI+R AA +P ++ E V+ PKRKNV+IS DPQ+VAA
Sbjct: 114 SNANSFLSSIEKKN--STTTIREMIFRIAAMQPAHIDPESVKPPKRKNVKISKDPQSVAA 171
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
R RRERISERIR+LQRLVPGG+KMDTASMLDEA +Y+KFL+ QV++LE G +P
Sbjct: 172 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKMQVQSLEQTGANRP 226
>gi|356541813|ref|XP_003539367.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 242
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 82/99 (82%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R A +P+++ E ++ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 102 SVAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 161
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
LVPGG+KMDTASMLDEA +Y+KFL+ QV+ LE G +P
Sbjct: 162 LVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRP 200
>gi|255538274|ref|XP_002510202.1| transcription factor, putative [Ricinus communis]
gi|223550903|gb|EEF52389.1| transcription factor, putative [Ricinus communis]
Length = 274
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 100/143 (69%), Gaps = 10/143 (6%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R AA +P+++ E V+ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 129 SMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 188
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP---DHHHSMNYPPTNLAFSSL 306
LVPGG+KMDTASMLDEA +Y+KFL++QV++LE +P + +P +A SS
Sbjct: 189 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAQASRPSTSSSSTGIGFP---IAMSS- 244
Query: 307 PFNNNSFPVQTHFSLQNPNHIHR 329
+ FP+ + Q H HR
Sbjct: 245 ---GSYFPMGKAYQQQQNAHHHR 264
>gi|255565212|ref|XP_002523598.1| DNA binding protein, putative [Ricinus communis]
gi|223537160|gb|EEF38793.1| DNA binding protein, putative [Ricinus communis]
Length = 278
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/111 (60%), Positives = 91/111 (81%), Gaps = 2/111 (1%)
Query: 174 SNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAA 233
SN +S SS+E+ + + A ++EMI+R AA +P+++ E ++ PKR+NV+IS DPQ+VAA
Sbjct: 127 SNANSFLSSMEKKN--STAAIREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAA 184
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPG 284
R RRERISERIR+LQRLVPGG+KMDTASMLDEA +Y+KFL+ QV++LE G
Sbjct: 185 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEQAG 235
>gi|356518097|ref|XP_003527719.1| PREDICTED: uncharacterized protein LOC100788158 [Glycine max]
gi|83853832|gb|ABC47864.1| bhelix-loop-helix transcription factor [Glycine max]
Length = 258
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 82/92 (89%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R AA +P+++ E V+ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 119 SMAAMREMIFRMAAMQPIHIDPESVKAPKRRNVKISKDPQSVAARHRRERISERIRILQR 178
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
LVPGG+KMDTASMLDEA +Y+KFL++QV++LE
Sbjct: 179 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 210
>gi|224063507|ref|XP_002301178.1| predicted protein [Populus trichocarpa]
gi|222842904|gb|EEE80451.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 86/108 (79%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R AA +P+ + E V+ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 122 SMATMREMIFRIAAMQPIQIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 181
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHSMNYP 297
LVPGG+KMDTASMLDEA +Y+KFL++QV++LE +P + +P
Sbjct: 182 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERFQANRPTTTTGIGFP 229
>gi|356509739|ref|XP_003523603.1| PREDICTED: transcription factor HEC1-like [Glycine max]
gi|83853819|gb|ABC47852.1| bHelix-loop-helix transcription factor [Glycine max]
Length = 264
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 83/92 (90%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R AA +P+++ E V++PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 116 SMAAMREMIFRMAAMQPIHIDPESVKQPKRRNVKISKDPQSVAARHRRERISERIRILQR 175
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
LVPGG+KMDTASMLDEA +Y+KFL++QV++L+
Sbjct: 176 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQ 207
>gi|242080237|ref|XP_002444887.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
gi|241941237|gb|EES14382.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
Length = 348
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 79/94 (84%)
Query: 189 EAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQ 248
E + MKEM+YR AA +PV++ ++KP+R+NVRIS DPQ+VAAR RRERISERIR+LQ
Sbjct: 164 EELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERIRILQ 223
Query: 249 RLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
RLVPGG+KMDTASMLDEA Y+KFL+ QV+ L++
Sbjct: 224 RLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQH 257
>gi|356511883|ref|XP_003524651.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 273
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 80/95 (84%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R A +PV++ E ++ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 117 SMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 176
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALENPG 284
LVPGG+KMDTASMLDEA +Y+KFL+ QV+ LE G
Sbjct: 177 LVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAG 211
>gi|242080239|ref|XP_002444888.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
gi|241941238|gb|EES14383.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
Length = 331
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 79/94 (84%)
Query: 189 EAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQ 248
E + MKEM+YR AA +PV++ ++KP+R+NVRIS DPQ+VAAR RRERISERIR+LQ
Sbjct: 147 EELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERIRILQ 206
Query: 249 RLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
RLVPGG+KMDTASMLDEA Y+KFL+ QV+ L++
Sbjct: 207 RLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQH 240
>gi|356565592|ref|XP_003551023.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 299
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 80/95 (84%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R A +PV++ E ++ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 120 SMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 179
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALENPG 284
LVPGG+KMDTASMLDEA +Y+KFL+ QV+ LE G
Sbjct: 180 LVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAG 214
>gi|293333080|ref|NP_001168866.1| uncharacterized protein LOC100382671 [Zea mays]
gi|223973413|gb|ACN30894.1| unknown [Zea mays]
Length = 335
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 77/92 (83%)
Query: 189 EAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQ 248
E + MKEM+YR AA +PV++ ++KP+R+NVRIS DPQ+VAAR RRERISERIR+LQ
Sbjct: 149 EELGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERIRILQ 208
Query: 249 RLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
RLVPGG+KMDTASMLDEA Y+KFL+ QV+ L
Sbjct: 209 RLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 240
>gi|297819712|ref|XP_002877739.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
gi|297323577|gb|EFH53998.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 79/91 (86%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+A M+EMI+R A +P+++ E V+ PKRKNVRIS DPQ+VAAR RRERISERIR+LQRL
Sbjct: 85 MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 144
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
VPGG+KMDTASMLDEA +Y+KFL+ QV++LE
Sbjct: 145 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 175
>gi|212721432|ref|NP_001131577.1| uncharacterized protein LOC100192921 [Zea mays]
gi|194691908|gb|ACF80038.1| unknown [Zea mays]
gi|414881478|tpg|DAA58609.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|414881479|tpg|DAA58610.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 427
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 61/63 (96%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
+NVRIS+DPQTVAARQRRERIS+R+RVLQ+LVPGG+KMDTASMLDEAA+YL+FL+SQV+
Sbjct: 314 RNVRISSDPQTVAARQRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRD 373
Query: 280 LEN 282
L+
Sbjct: 374 LQT 376
>gi|297797671|ref|XP_002866720.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
gi|297312555|gb|EFH42979.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 79/91 (86%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+A M+EMI+R A +P+++ E V+ PKR+NVRIS DPQ+VAAR RRERISERIR+LQRL
Sbjct: 95 MAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRL 154
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
VPGG+KMDTASMLDEA +Y+KFL+ QV++LE
Sbjct: 155 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 185
>gi|15240189|ref|NP_201507.1| transcription factor HEC1 [Arabidopsis thaliana]
gi|75309085|sp|Q9FHA7.1|HEC1_ARATH RecName: Full=Transcription factor HEC1; AltName: Full=Basic
helix-loop-helix protein 88; Short=AtbHLH88; Short=bHLH
88; AltName: Full=Protein HECATE 1; AltName:
Full=Transcription factor EN 118; AltName: Full=bHLH
transcription factor bHLH088
gi|20127097|gb|AAM10961.1|AF488618_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|10177593|dbj|BAB10940.1| unnamed protein product [Arabidopsis thaliana]
gi|110737755|dbj|BAF00816.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332010913|gb|AED98296.1| transcription factor HEC1 [Arabidopsis thaliana]
Length = 241
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 79/91 (86%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+A M+EMI+R A +P+++ E V+ PKR+NVRIS DPQ+VAAR RRERISERIR+LQRL
Sbjct: 95 MAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRL 154
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
VPGG+KMDTASMLDEA +Y+KFL+ QV++LE
Sbjct: 155 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 185
>gi|15229725|ref|NP_190602.1| transcription factor HEC2 [Arabidopsis thaliana]
gi|75313649|sp|Q9SND4.1|HEC2_ARATH RecName: Full=Transcription factor HEC2; AltName: Full=Basic
helix-loop-helix protein 37; Short=AtbHLH37; Short=bHLH
37; AltName: Full=Protein HECATE 2; AltName:
Full=Transcription factor EN 117; AltName: Full=bHLH
transcription factor bHLH037
gi|6523044|emb|CAB62312.1| putative protein [Arabidopsis thaliana]
gi|37202028|gb|AAQ89629.1| At3g50330 [Arabidopsis thaliana]
gi|51969500|dbj|BAD43442.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|51969966|dbj|BAD43675.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|332645132|gb|AEE78653.1| transcription factor HEC2 [Arabidopsis thaliana]
Length = 231
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 79/91 (86%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+A M+EMI+R A +P+++ E V+ PKRKNVRIS DPQ+VAAR RRERISERIR+LQRL
Sbjct: 92 MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 151
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
VPGG+KMDTASMLDEA +Y+KFL+ QV++LE
Sbjct: 152 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182
>gi|51970182|dbj|BAD43783.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
Length = 231
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 79/91 (86%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+A M+EMI+R A +P+++ E V+ PKRKNVRIS DPQ+VAAR RRERISERIR+LQRL
Sbjct: 92 MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 151
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
VPGG+KMDTASMLDEA +Y+KFL+ QV++LE
Sbjct: 152 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182
>gi|326530726|dbj|BAK01161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 238
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 76/88 (86%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
M+EMI+ AA +PV++ E V PKR+NVR S DPQ+VAAR RRERISERIRVLQRLVPG
Sbjct: 125 MREMIFHIAALQPVDIDPEAVRPPKRRNVRTSKDPQSVAARLRRERISERIRVLQRLVPG 184
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALE 281
G+KMDTASMLDEA +Y+KFL+SQV++LE
Sbjct: 185 GTKMDTASMLDEAIHYVKFLKSQVQSLE 212
>gi|225438732|ref|XP_002277850.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|296082413|emb|CBI21418.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 83/99 (83%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+ A +P+++ E V+ PKR+NV+IS DPQ+VAAR RRERISERIR+LQR
Sbjct: 116 SMAAMREMIFSIAVMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQR 175
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
LVPGG+KMDTASMLDEA +Y+KFL++QV++LE G +P
Sbjct: 176 LVPGGTKMDTASMLDEAIHYVKFLKNQVQSLERAGAHRP 214
>gi|115479527|ref|NP_001063357.1| Os09g0455300 [Oryza sativa Japonica Group]
gi|51535231|dbj|BAD38280.1| basic helix-loop-helix (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|51536285|dbj|BAD38453.1| basic helix-loop-helix (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|113631590|dbj|BAF25271.1| Os09g0455300 [Oryza sativa Japonica Group]
gi|125563981|gb|EAZ09361.1| hypothetical protein OsI_31634 [Oryza sativa Indica Group]
gi|215697773|dbj|BAG91966.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765762|dbj|BAG87459.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 236
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 76/88 (86%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
M+EMI+ AA +PV + E V PKR+NVRIS DPQ+VAAR RRERISERIR+LQRLVPG
Sbjct: 117 MREMIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRILQRLVPG 176
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALE 281
G+KMDTASMLDEA +Y+KFL+SQV++LE
Sbjct: 177 GTKMDTASMLDEAIHYVKFLKSQVQSLE 204
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 212 EVVE-KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYL 270
E+V+ +PKR+NVRIS DPQ+VAAR RRERIS+R+RVLQ VPGG+KMDTASMLDEA +Y+
Sbjct: 375 EIVQLRPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYV 434
Query: 271 KFLRSQVKALENPG 284
KFL+ Q++ LE G
Sbjct: 435 KFLQQQLQTLERIG 448
>gi|297725985|ref|NP_001175356.1| Os08g0108500 [Oryza sativa Japonica Group]
gi|255678100|dbj|BAH94084.1| Os08g0108500 [Oryza sativa Japonica Group]
Length = 306
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 78/92 (84%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+ MKEM+YR AA +PV++ ++KP+R+NVRIS DPQ+VAAR RRERISERIR+LQRL
Sbjct: 130 LGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISDDPQSVAARHRRERISERIRILQRL 189
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
VPGG+KMDTASMLDEA Y+KFL+ QV+ L++
Sbjct: 190 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQH 221
>gi|242044912|ref|XP_002460327.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
gi|241923704|gb|EER96848.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
Length = 261
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 74/88 (84%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
M+E I+ AA +PV + E V PKR+NVRIS DPQ+VAAR RRERISERIR LQRLVPG
Sbjct: 142 MREAIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRTLQRLVPG 201
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALE 281
G+KMDTASMLDEA +Y+KFL+SQV++LE
Sbjct: 202 GTKMDTASMLDEAIHYVKFLKSQVQSLE 229
>gi|125601936|gb|EAZ41261.1| hypothetical protein OsJ_25770 [Oryza sativa Japonica Group]
Length = 303
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 78/92 (84%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+ MKEM+YR AA +PV++ ++KP+R+NVRIS DPQ+VAAR RRERISERIR+LQRL
Sbjct: 127 LGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISDDPQSVAARHRRERISERIRILQRL 186
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
VPGG+KMDTASMLDEA Y+KFL+ QV+ L++
Sbjct: 187 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQH 218
>gi|125559887|gb|EAZ05335.1| hypothetical protein OsI_27539 [Oryza sativa Indica Group]
Length = 303
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 78/92 (84%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+ MKEM+YR AA +PV++ ++KP+R+NVRIS DPQ+VAAR RRERISERIR+LQRL
Sbjct: 127 LGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISDDPQSVAARHRRERISERIRILQRL 186
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
VPGG+KMDTASMLDEA Y+KFL+ QV+ L++
Sbjct: 187 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQH 218
>gi|226497552|ref|NP_001147658.1| LOC100281267 [Zea mays]
gi|195612888|gb|ACG28274.1| DNA binding protein [Zea mays]
gi|414885734|tpg|DAA61748.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 74/88 (84%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
M+E I+ AA +PV + E V PKR+NVRIS DPQ+VAAR RRERISERIR LQRLVPG
Sbjct: 125 MREAIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRTLQRLVPG 184
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKALE 281
G+KMDTASMLDEA +Y+KFL+SQV++LE
Sbjct: 185 GTKMDTASMLDEAIHYVKFLKSQVQSLE 212
>gi|15242494|ref|NP_196537.1| transcription factor HEC3 [Arabidopsis thaliana]
gi|75311668|sp|Q9LXD8.1|HEC3_ARATH RecName: Full=Transcription factor HEC3; AltName: Full=Basic
helix-loop-helix protein 43; Short=AtbHLH43; Short=bHLH
43; AltName: Full=Protein HECATE 3; AltName:
Full=Transcription factor EN 119; AltName: Full=bHLH
transcription factor bHLH043
gi|7671414|emb|CAB89355.1| putative protein [Arabidopsis thaliana]
gi|9759006|dbj|BAB09533.1| unnamed protein product [Arabidopsis thaliana]
gi|332004059|gb|AED91442.1| transcription factor HEC3 [Arabidopsis thaliana]
Length = 224
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 76/92 (82%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+ MKEM+Y+ AA + V++ V+KPKR+NVRIS DPQ+VAAR RRERISERIR+LQRL
Sbjct: 92 LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
VPGG+KMDTASMLDEA Y+KFL+ Q++ L N
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLNN 183
>gi|168023485|ref|XP_001764268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684420|gb|EDQ70822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 5/84 (5%)
Query: 200 RAAAFRPVNLGLEVVE-----KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGG 254
RA FR + + +E +PKR+NVRIS DPQ+VAAR RRERIS+RIRVLQRLVPGG
Sbjct: 3 RAILFRHASQPIPTLEEIASSRPKRRNVRISKDPQSVAARHRRERISDRIRVLQRLVPGG 62
Query: 255 SKMDTASMLDEAANYLKFLRSQVK 278
+KMDTASMLDEA +Y+KFL+ Q++
Sbjct: 63 TKMDTASMLDEAIHYVKFLKLQLQ 86
>gi|297811073|ref|XP_002873420.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
gi|297319257|gb|EFH49679.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 74/87 (85%)
Query: 194 MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPG 253
MKEM+Y+ AA + V++ V+KPKR+NVRIS DPQ+VAAR RRERISERIR+LQRLVPG
Sbjct: 88 MKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPG 147
Query: 254 GSKMDTASMLDEAANYLKFLRSQVKAL 280
G+KMDTASMLDEA Y+KFL+ Q++ L
Sbjct: 148 GTKMDTASMLDEAIRYVKFLKRQIRLL 174
>gi|168042091|ref|XP_001773523.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675225|gb|EDQ61723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 706
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 53/57 (92%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
+PKR+NVRIS+DPQ+VAAR RRERIS+R+RVLQ VPGG+KMDTASMLDEA +Y+KF
Sbjct: 502 RPKRRNVRISSDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKF 558
>gi|168017686|ref|XP_001761378.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687384|gb|EDQ73767.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 52/57 (91%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
+PKR+NVRIS DPQ+VAAR RRERIS+R+RVLQ VPGG+KMDTASMLDEA +Y+KF
Sbjct: 360 RPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKF 416
>gi|357158743|ref|XP_003578226.1| PREDICTED: uncharacterized protein LOC100844721 [Brachypodium
distachyon]
Length = 247
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 77/104 (74%), Gaps = 8/104 (7%)
Query: 186 PDPEAIAHMKEMIYRAAAFRPVNLGLEVVE--------KPKRKNVRISTDPQTVAARQRR 237
P P M+EMI+ AA +PV + VE K +R+NVR S DPQ+VAAR RR
Sbjct: 118 PQPPQRDAMREMIFHIAALQPVMNDDDDVEAAGAVRPAKKQRRNVRTSKDPQSVAARLRR 177
Query: 238 ERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
ERISERIRVLQRLVPGG+KMDTASMLDEA +Y+KFL+SQV++LE
Sbjct: 178 ERISERIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLE 221
>gi|219363295|ref|NP_001136892.1| uncharacterized protein LOC100217048 [Zea mays]
gi|194697492|gb|ACF82830.1| unknown [Zea mays]
gi|414589607|tpg|DAA40178.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Query: 194 MKEMIYRAAAFRPV----NLGLE----VVEKPKRKNVRISTDPQTVAARQRRERISERIR 245
M+E I+R AA +PV G E V PKR+NVR+S DPQ+VAAR RRERISERIR
Sbjct: 126 MREAIFRIAALQPVEDQTTTGPEPEAAVRRAPKRRNVRVSKDPQSVAARLRRERISERIR 185
Query: 246 VLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
LQRLVPGG+KMDTASMLDEA Y+KFL+SQ+++L+
Sbjct: 186 ALQRLVPGGTKMDTASMLDEAIQYVKFLKSQLQSLQ 221
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 94.7 bits (234), Expect = 6e-17, Method: Composition-based stats.
Identities = 44/59 (74%), Positives = 53/59 (89%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
RIS DPQ+VAAR RRERIS+RIRVLQRLVPGG+KMDTASMLDEA +Y+KFL+ Q++ +
Sbjct: 1 RISKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQVCD 59
>gi|255644404|gb|ACU22707.1| unknown [Glycine max]
Length = 185
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
++A M+EMI+R A +PV++ E ++ PKR+NV+IS DPQ+VAAR RRERISERI++LQR
Sbjct: 120 SMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIKILQR 179
Query: 250 LVPGGS 255
LVPGG+
Sbjct: 180 LVPGGT 185
>gi|224091579|ref|XP_002334947.1| predicted protein [Populus trichocarpa]
gi|222875273|gb|EEF12404.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 51/57 (89%)
Query: 221 NVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
V++STDPQ+VAAR+RR RIS+R ++LQ LVPGG+KMDT SML+EA NY+KFL++QV
Sbjct: 34 GVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKTQV 90
>gi|449461799|ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
gi|449532778|ref|XP_004173357.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 195
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 51/56 (91%)
Query: 222 VRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
V++STDPQ+VAAR+RR RIS+R ++LQ LVPGG+KMDT SMLDEA +Y+KFL++Q+
Sbjct: 46 VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 101
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 51/56 (91%)
Query: 222 VRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
V++STDPQ+VAAR+RR RIS+R ++LQ LVPGG+KMDT SML+EA NY+KFL++Q+
Sbjct: 35 VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKNQI 90
>gi|357131240|ref|XP_003567247.1| PREDICTED: transcription factor LAX PANICLE-like [Brachypodium
distachyon]
Length = 228
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 52/60 (86%)
Query: 218 KRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
+R ++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 55 RRPGTKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 114
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 53/63 (84%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K S +PQ+VAAR RR++ISERIRVL++L+PGG+KMDTA+MLDEA Y+KFL+ QV+
Sbjct: 382 KPAATSVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQI 441
Query: 280 LEN 282
LE+
Sbjct: 442 LES 444
>gi|227016421|gb|ACP18672.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 106
>gi|227016419|gb|ACP18671.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 106
>gi|227016424|gb|ACP18673.1| barren stalk1-like protein [Leymus triticoides]
Length = 158
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 105
>gi|15240948|ref|NP_195751.1| aprataxin [Arabidopsis thaliana]
gi|75335734|sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic
helix-loop-helix protein 140; Short=AtbHLH140;
Short=bHLH 140; AltName: Full=Transcription factor EN
122; AltName: Full=bHLH transcription factor bHLH140
gi|7320709|emb|CAB81914.1| putative protein [Arabidopsis thaliana]
gi|332002943|gb|AED90326.1| aprataxin [Arabidopsis thaliana]
Length = 912
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
K R +STDPQ+VAAR RR RIS+R ++LQ +VPGG+KMDT SMLDEA +Y+KFL++
Sbjct: 35 KRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKA 94
Query: 276 QVKALENPGHQKPDHH--HSMNYPPTNLAFSS--LPFNNNSFPVQTHFSLQNP 324
Q+ +N DH S Y P F ++++ P+ +S P
Sbjct: 95 QIWYHQNMLLFINDHETTSSCTYSPGAGEFGPKLFGYDDDYAPIMDTYSQGVP 147
>gi|227016415|gb|ACP18669.1| barren stalk1-like protein [Leymus cinereus]
Length = 149
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 106
>gi|51090503|dbj|BAD35705.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 211
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 52/59 (88%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
+S++PQ+VAAR RRER+S+R+R LQRLVPGG+++DTASML+EA Y+KFL+ V++LE
Sbjct: 120 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSLER 178
>gi|115440839|ref|NP_001044699.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|68565366|sp|Q7XAQ6.1|LAX_ORYSJ RecName: Full=Transcription factor LAX PANICLE
gi|33342172|dbj|BAC80247.1| transcription factor [Oryza sativa Japonica Group]
gi|56785174|dbj|BAD81850.1| transcription factor [Oryza sativa Japonica Group]
gi|113534230|dbj|BAF06613.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|342674132|gb|AEL31274.1| LAX protein [Oryza sativa Japonica Group]
Length = 215
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 39 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 93
>gi|62466491|gb|AAX83571.1| LAX [Oryza sativa Japonica Group]
gi|62466499|gb|AAX83575.1| LAX [Oryza sativa Indica Group]
gi|62466503|gb|AAX83577.1| LAX [Oryza sativa Indica Group]
gi|62466505|gb|AAX83578.1| LAX [Oryza sativa Indica Group]
gi|62466507|gb|AAX83579.1| LAX [Oryza sativa Indica Group]
gi|62466509|gb|AAX83580.1| LAX [Oryza sativa Indica Group]
gi|62466513|gb|AAX83582.1| LAX [Oryza rufipogon]
gi|62466515|gb|AAX83583.1| LAX [Oryza rufipogon]
Length = 189
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 77
>gi|62466519|gb|AAX83585.1| LAX [Oryza rufipogon]
Length = 189
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 77
>gi|62466473|gb|AAX83562.1| LAX [Oryza barthii]
gi|62466475|gb|AAX83563.1| LAX [Oryza meridionalis]
gi|62466477|gb|AAX83564.1| LAX [Oryza longistaminata]
gi|62466479|gb|AAX83565.1| LAX [Oryza glumipatula]
gi|62466481|gb|AAX83566.1| LAX [Oryza nivara]
gi|62466483|gb|AAX83567.1| LAX [Oryza rufipogon]
gi|62466485|gb|AAX83568.1| LAX [Oryza sativa Japonica Group]
gi|62466487|gb|AAX83569.1| LAX [Oryza sativa Japonica Group]
gi|62466489|gb|AAX83570.1| LAX [Oryza sativa Japonica Group]
gi|62466493|gb|AAX83572.1| LAX [Oryza sativa Japonica Group]
gi|62466495|gb|AAX83573.1| LAX [Oryza sativa Indica Group]
gi|62466497|gb|AAX83574.1| LAX [Oryza sativa Indica Group]
gi|62466501|gb|AAX83576.1| LAX [Oryza sativa Indica Group]
gi|62466511|gb|AAX83581.1| LAX [Oryza sativa Indica Group]
gi|62466517|gb|AAX83584.1| LAX [Oryza rufipogon]
Length = 189
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 77
>gi|62466521|gb|AAX83586.1| LAX [Oryza rufipogon]
Length = 190
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 77
>gi|147838921|emb|CAN77067.1| hypothetical protein VITISV_022410 [Vitis vinifera]
gi|297735648|emb|CBI18142.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 13/112 (11%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK----- 278
+STDPQ+VAAR+RR RIS+R ++LQ LVPGG+KMDT SML+EA +Y+K+L++Q+
Sbjct: 36 LSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAIHYVKYLKTQIWLHQTM 95
Query: 279 --------ALENPGHQKPDHHHSMNYPPTNLAFSSLPFNNNSFPVQTHFSLQ 322
+L P H Y P P+ + PV+ + Q
Sbjct: 96 INFVDDDPSLLYQSDSLPSHQQEAFYSPDETLAMMQPYITTTAPVRDSYCFQ 147
>gi|125554507|gb|EAZ00113.1| hypothetical protein OsI_22119 [Oryza sativa Indica Group]
Length = 201
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 52/59 (88%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
+S++PQ+VAAR RRER+S+R+R LQRLVPGG+++DTASML+EA Y+KFL+ V++LE
Sbjct: 121 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSLER 179
>gi|62466523|gb|AAX83587.1| LAX [Oryza rufipogon]
Length = 189
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 77
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
KP+ K + DPQ++AARQRRERIS+R+++LQ L+P GSK+D +ML++A NY+KFL+
Sbjct: 407 KPRAKQG-CANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQL 465
Query: 276 QVKALENPGHQKPDHHHSMNYP 297
QVK L N + P +YP
Sbjct: 466 QVKVLMNDEYWPPKGDGEEDYP 487
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
KP+ K + DPQ++AARQRRERIS+R+++LQ L+P GSK+D +ML++A NY+KFL+
Sbjct: 407 KPRAKQG-CANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQL 465
Query: 276 QVKALENPGHQKPDHHHSMNYP 297
QVK L N + P +YP
Sbjct: 466 QVKVLMNDEYWPPKGDGEEDYP 487
>gi|242059137|ref|XP_002458714.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
gi|241930689|gb|EES03834.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
Length = 232
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 50/57 (87%)
Query: 221 NVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++Q+
Sbjct: 54 GAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQI 110
>gi|297810265|ref|XP_002873016.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318853|gb|EFH49275.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 898
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 50/62 (80%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
K R +STDPQ+VAAR+RR RISER ++LQ +VPGG+KMDT SML+EA Y+KFL++
Sbjct: 35 KRSRSTSTLSTDPQSVAARERRHRISERFKILQSMVPGGAKMDTVSMLEEAIRYVKFLKA 94
Query: 276 QV 277
Q+
Sbjct: 95 QI 96
>gi|162459126|ref|NP_001105271.1| barren stalk1 [Zea mays]
gi|56384213|gb|AAV85767.1| barren stalk1 [Zea mays]
gi|56384215|gb|AAV85768.1| barren stalk1 [Zea mays]
gi|223946525|gb|ACN27346.1| unknown [Zea mays]
gi|414879869|tpg|DAA57000.1| TPA: barren stalk1 [Zea mays]
Length = 219
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++Q+
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQI 105
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 60/77 (77%), Gaps = 4/77 (5%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE--- 281
+ +PQ++AARQRR++ISER+R L++LVPGG+K+DTASMLDEA ++KFL+ QV+ LE
Sbjct: 385 TVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEAVG 444
Query: 282 NPGH-QKPDHHHSMNYP 297
N GH ++H +N P
Sbjct: 445 NGGHGNYGANNHCLNVP 461
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 60/77 (77%), Gaps = 4/77 (5%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE--- 281
+ +PQ++AARQRR++ISER+R L++LVPGG+K+DTASMLDEA ++KFL+ QV+ LE
Sbjct: 385 TVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEAVG 444
Query: 282 NPGH-QKPDHHHSMNYP 297
N GH ++H +N P
Sbjct: 445 NGGHGNYGANNHCLNVP 461
>gi|125528258|gb|EAY76372.1| hypothetical protein OsI_04303 [Oryza sativa Indica Group]
Length = 223
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKM+T SML++A +Y+KFL++QV
Sbjct: 47 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMETVSMLEQAIHYVKFLKAQV 101
>gi|326527333|dbj|BAK04608.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 49/55 (89%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMD SML++A +Y+KFL++QV
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDNVSMLEQAIHYVKFLKAQV 106
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVRIS-TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KPK + R S TDPQ++ AR+RRERI+ER+R+LQ+LVP G+K+D ++ML+EA +Y+KFL+
Sbjct: 234 KPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQ 293
Query: 275 SQVKAL 280
Q+K L
Sbjct: 294 LQIKLL 299
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVRIS-TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KPK + R S TDPQ++ AR+RRERI+ER+R+LQ+LVP G+K+D ++ML+EA +Y+KFL+
Sbjct: 234 KPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQ 293
Query: 275 SQVKAL 280
Q+K L
Sbjct: 294 LQIKLL 299
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 84.7 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 54/63 (85%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K V S +PQ+VAAR RR++ISERIRVL++L+PGG+KMDTA+MLDEA Y+KFL+ QV+
Sbjct: 10 KPVATSVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQI 69
Query: 280 LEN 282
LE+
Sbjct: 70 LES 72
>gi|357506069|ref|XP_003623323.1| LAX [Medicago truncatula]
gi|355498338|gb|AES79541.1| LAX [Medicago truncatula]
Length = 153
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 48/54 (88%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
+STDPQ+VAAR+RR RIS+R ++LQ ++PGGSK+DT SML+EA +Y+KFL+ Q+
Sbjct: 32 LSTDPQSVAARERRHRISDRFKILQSMIPGGSKLDTVSMLEEAIHYVKFLKKQI 85
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 49/55 (89%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
+TDPQ++ AR+RRERI+ER+RVLQ LVP G+K+D ++ML+EA NY+KFL++Q+K
Sbjct: 281 ATDPQSLYARKRRERINERLRVLQNLVPNGTKVDISTMLEEAVNYVKFLQTQIKV 335
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 50/56 (89%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ+LVP G+K+D ++ML+EAA Y+KFL+ Q+K L
Sbjct: 197 ATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAAQYVKFLQLQIKLL 252
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL--EN 282
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA NY+KFL+ Q+K L ++
Sbjct: 271 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDD 330
Query: 283 PGHQKPDHHHSMNYPPTNLAFSSLPF 308
P H+ ++ L +SLP
Sbjct: 331 LWMYAPFAHNGLD---IGLNLNSLPL 353
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 53/68 (77%)
Query: 213 VVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
+KPK K+ + DPQ++AA+ RRERISER+++LQ LVP GSK+D +ML++A +Y+KF
Sbjct: 222 ATKKPKPKSAGPAKDPQSIAAKNRRERISERLKMLQDLVPNGSKVDLVTMLEKAISYVKF 281
Query: 273 LRSQVKAL 280
L+ QVK L
Sbjct: 282 LQLQVKVL 289
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 52/68 (76%)
Query: 213 VVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
V P K + +TDPQ++ AR+RRERI+ER++VLQ LVP G+K+D ++ML+EA Y+KF
Sbjct: 213 VAANPSGKGRQSTTDPQSLYARKRRERINERLKVLQNLVPNGTKVDISTMLEEAVQYVKF 272
Query: 273 LRSQVKAL 280
L+ Q+K L
Sbjct: 273 LQLQIKLL 280
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R N +TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K
Sbjct: 188 RANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIK 247
Query: 279 AL--ENPGHQKPDHHHSMNYPPTNLAFSSL 306
L ++ P ++ +N +L SSL
Sbjct: 248 LLSSDDTWMYAPIAYNGVNISNIDLNISSL 277
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 49/56 (87%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA NY+KFL+ Q+K L
Sbjct: 268 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLL 323
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R N +TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K
Sbjct: 188 RANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIK 247
Query: 279 AL--ENPGHQKPDHHHSMNYPPTNLAFSSL 306
L ++ P ++ +N +L SSL
Sbjct: 248 LLSSDDMWMYAPIAYNGVNISNIDLNISSL 277
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 54/67 (80%)
Query: 214 VEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFL 273
V + R + +TDPQ++ AR+RRERI+ER+R+LQ+LVP G+K+D ++ML+EA +Y+KFL
Sbjct: 233 VNRKSRASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFL 292
Query: 274 RSQVKAL 280
+ Q+K L
Sbjct: 293 QLQIKLL 299
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 51/67 (76%)
Query: 214 VEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFL 273
+ + R +TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL
Sbjct: 260 LHRKSRATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFL 319
Query: 274 RSQVKAL 280
+ Q+K L
Sbjct: 320 QLQIKLL 326
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL--EN 282
+TD Q++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L E+
Sbjct: 203 ATDAQSIYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSED 262
Query: 283 PGHQKPDHHHSMNYPPTNLAFSS 305
P ++ MN +L+FSS
Sbjct: 263 MWMYAPIAYNGMNI-GLDLSFSS 284
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 49/56 (87%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EAA Y+KFL+ Q+K L
Sbjct: 203 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQLQIKLL 258
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
KP+ K +TDPQ++ ARQRRERI+ER+R LQ LVP G+K+D +ML+EA NY+KFL+
Sbjct: 236 KPRAKRGS-ATDPQSIYARQRRERINERLRALQGLVPNGAKVDIVTMLEEAINYVKFLQL 294
Query: 276 QVKALENPGHQKPDHHHSMN 295
Q+ + + P +++ MN
Sbjct: 295 QLLSSDEYWMYAPTNYNGMN 314
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 51/67 (76%)
Query: 214 VEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFL 273
+++ R + DPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL
Sbjct: 260 LDRKSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFL 319
Query: 274 RSQVKAL 280
+ Q+K L
Sbjct: 320 QLQIKLL 326
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 49/56 (87%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 270 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 325
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 49/56 (87%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 273 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 49/56 (87%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 272 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 327
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 49/56 (87%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 273 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
K + N S DPQ+VAA+ RRERISER+++LQ LVP GSK+D +ML++A +Y+KFL+
Sbjct: 237 KTTKHNSSPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQL 296
Query: 276 QVKAL 280
QVK L
Sbjct: 297 QVKVL 301
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 49/56 (87%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 214 ATDPQSIYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 269
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 47/56 (83%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
S DPQ+VAA+ RRERISER+++LQ LVP GSK+D +ML++A +Y+KFL+ QVK L
Sbjct: 246 SKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 301
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL--EN 282
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA +Y+KFL+ Q+K L ++
Sbjct: 100 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDD 159
Query: 283 PGHQKPDHHHSMNYPPTNL 301
P ++ M+ NL
Sbjct: 160 MWMYAPIAYNGMDIGLQNL 178
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 271 ATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 326
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL--EN 282
+TDPQ++ AR+RRERI+ER+++LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L ++
Sbjct: 231 ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDD 290
Query: 283 PGHQKPDHHHSMN 295
P ++ MN
Sbjct: 291 TWMYSPIAYNGMN 303
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 49/56 (87%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 294 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 349
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 49/56 (87%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 294 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 349
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 46/54 (85%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
DPQ+VAA+ RRERISER+++LQ LVP GSK+D +ML++A +Y+KFL+ QVK L
Sbjct: 211 DPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 264
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 191 ATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 246
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 47/56 (83%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
S DPQ++AA+ RRERISER+++LQ LVP GSK+D +ML++A +Y+KFL+ QVK L
Sbjct: 232 SKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 287
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Query: 215 EKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
+KPK + DPQ++AA+ RRERISER+++LQ LVP GSK+D +ML++A +Y+KFL+
Sbjct: 181 QKPKSATAK---DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQ 237
Query: 275 SQVKAL 280
QVK L
Sbjct: 238 LQVKIL 243
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 244 ATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL--EN 282
+T+PQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EAA Y+KFL+ Q+K L ++
Sbjct: 201 ATEPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLSCDD 260
Query: 283 PGHQKPDHHHSMNYPPTNLAFSSL 306
P ++ +N +L SL
Sbjct: 261 TWMYAPIAYNGINIGNVDLNIYSL 284
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 213 VVEKPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLK 271
V K K + R STDPQ++ AR+RRERI+ER++ LQ LVP G+K+D ++ML+EA +Y+K
Sbjct: 209 VCPKGKARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTKVDMSTMLEEAVHYVK 268
Query: 272 FLRSQVKAL 280
FL+ Q+K L
Sbjct: 269 FLQLQIKVL 277
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 244 ATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R N ++DPQ V A++RRERI+ER+++LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K
Sbjct: 239 RCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQVQIK 298
Query: 279 ALENPGHQ--KPDHHHSMN 295
L + H P ++ MN
Sbjct: 299 LLSSDDHWMYAPIAYNGMN 317
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 231 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 254 ATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 309
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 244 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 50/68 (73%)
Query: 213 VVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
V K K K DPQ++AA+ RRERISER+++LQ LVP G+K+D +ML++A +Y+KF
Sbjct: 188 VTGKAKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKF 247
Query: 273 LRSQVKAL 280
L+ QVK L
Sbjct: 248 LQVQVKVL 255
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 50/68 (73%)
Query: 213 VVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
V K K K DPQ++AA+ RRERISER+++LQ LVP G+K+D +ML++A +Y+KF
Sbjct: 190 VTGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKF 249
Query: 273 LRSQVKAL 280
L+ QVK L
Sbjct: 250 LQVQVKVL 257
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 50/58 (86%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R +TDPQ++ AR+RRERI+ER+++LQ LVP G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 226 RSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLL 283
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 50/58 (86%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R +TDPQ++ AR+RRERI+ER+++LQ LVP G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 226 RSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLL 283
>gi|356551793|ref|XP_003544258.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 110
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 47/56 (83%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
S DPQ+VAA+ RRERISER+++LQ LVP GSK+D +ML++A +Y+KFL+ QVK L
Sbjct: 24 SQDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 79
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+++LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 266 ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLL 321
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRE+I+ER+++LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 253 ATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 308
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+++LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 262 ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLL 317
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+++LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 261 ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLL 316
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 210 GLEVVEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDE 265
G +PK++ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE
Sbjct: 235 GTTPAAQPKQQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDE 294
Query: 266 AANYLKFLRSQVKAL 280
+Y+KFL+ QVK L
Sbjct: 295 IIDYVKFLQLQVKVL 309
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
A+AH K + ++A+ R + L KP+ + + DPQ++AAR RRERISER++VLQ
Sbjct: 729 ALAHQK--VSQSASGRALGPALNTNLKPRARQGS-ANDPQSIAARVRRERISERLKVLQA 785
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
L+P G K+D +ML++A Y++ L Q+K L+N
Sbjct: 786 LIPNGDKVDMVTMLEKAITYVQCLELQIKMLKN 818
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 214 VEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFL 273
+++ + N I++DPQ++ AR+RRERI++R++ LQ LVP G+K+D ++ML++A +Y+KFL
Sbjct: 128 LKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFL 187
Query: 274 RSQVKAL--ENPGHQKPDHHHSMN 295
+ Q+K L E+ P H+ +N
Sbjct: 188 QLQIKLLSSEDLWMYAPLAHNGLN 211
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
K K K DPQ++AA+ RRERISER++VLQ LVP G+K+D +ML++A Y+KFL+
Sbjct: 199 KIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQV 258
Query: 276 QVKAL 280
QVK L
Sbjct: 259 QVKVL 263
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 45/54 (83%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
DPQ++AA+ RRERISER++VLQ LVP G+K+D +ML++A Y+KFL+ QVK L
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL 263
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 45/54 (83%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
DPQ++AA+ RRERISER++VLQ LVP G+K+D +ML++A Y+KFL+ QVK L
Sbjct: 142 DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL 195
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 47/53 (88%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
DPQ++AARQRRERIS+R+++LQ LVP GSK+D +ML++A NY+KF++ Q++A
Sbjct: 242 DPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAINYVKFMQLQLQA 294
>gi|227016417|gb|ACP18670.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 99
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 44/49 (89%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLK 271
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+K
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVK 99
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 47/53 (88%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
DPQ++AARQRRERIS+R+++LQ LVP GSK+D +ML++A NY+KF++ Q++A
Sbjct: 242 DPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAINYVKFMQLQLQA 294
>gi|357128639|ref|XP_003565978.1| PREDICTED: uncharacterized protein LOC100831424 [Brachypodium
distachyon]
Length = 299
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 6/74 (8%)
Query: 210 GLEVVEKPKRKNV----RISTDPQTVAARQRRERISERIRVLQRLVPGG--SKMDTASML 263
G E + + K++ + + +PQTVAAR RRE++SER+R L+RLVPGG KMDTASML
Sbjct: 160 GTEAMAQAKQEAIIYRAAAAAEPQTVAARLRREKVSERLRALRRLVPGGGSGKMDTASML 219
Query: 264 DEAANYLKFLRSQV 277
+AA YL FL++Q+
Sbjct: 220 HQAACYLSFLKAQL 233
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 48/55 (87%)
Query: 226 TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
TDPQ++ AR+RRERI+ER+++LQ L+P G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLL 294
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 48/55 (87%)
Query: 226 TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
TDPQ++ AR+RRERI+ER+++LQ L+P G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLL 294
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 48/55 (87%)
Query: 226 TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
TDPQ++ AR+RRERI+ER+++LQ L+P G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLL 294
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 210 GLEVVEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDE 265
G V R VR +TDP ++A R RRERI+ER++ LQ LVP G+K D ASMLDE
Sbjct: 126 GTVAVPPQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDE 185
Query: 266 AANYLKFLRSQVKAL 280
+Y+KFL+ QVK L
Sbjct: 186 IIDYVKFLQLQVKVL 200
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KPK + R +TDP ++A R RRERI+ER++ LQ LVP G+K D ASMLDE +Y+KFL+
Sbjct: 184 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 243
Query: 275 SQVKAL 280
QVK L
Sbjct: 244 LQVKVL 249
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 50/62 (80%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R N +TDPQ++ AR+RRE+I+ER+R LQ LVP G+K+D ++ML++A +Y+KFL+ Q+K
Sbjct: 199 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIK 258
Query: 279 AL 280
L
Sbjct: 259 LL 260
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER++ LQ LVP G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 223 ATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 278
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Query: 201 AAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTA 260
A+ RPV+ L K R R +T+ Q++ AR+RRERI+ER+R+LQ LVP G+K+D +
Sbjct: 196 ASQGRPVSDNLGGKAKADR---RSATESQSLYARKRRERINERLRILQNLVPNGTKVDIS 252
Query: 261 SMLDEAANYLKFLRSQVKAL 280
+ML+EA Y+KFL+ Q+K L
Sbjct: 253 TMLEEAVEYVKFLQLQIKLL 272
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 46/54 (85%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
DPQ++AA+ RRERISER+++LQ LVP GSK+D +ML++A +Y+KFL+ QVK L
Sbjct: 256 DPQSLAAKNRRERISERLKILQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 309
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 54/67 (80%)
Query: 214 VEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFL 273
+++ + N I++DPQ++ AR+RRERI++R++ LQ LVP G+K+D ++ML++A +Y+KFL
Sbjct: 129 LKRKAKSNKGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFL 188
Query: 274 RSQVKAL 280
+ Q+K L
Sbjct: 189 QLQIKLL 195
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 46/54 (85%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
DPQ++AA+ RRERISER+R+LQ LVP G+K+D +ML++A +Y+KFL+ QVK L
Sbjct: 206 DPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 259
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 48/62 (77%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R N +TDPQ++ A+QRRERI+ R+R LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K
Sbjct: 205 RSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTKVDISTMLEEAVRYVKFLQLQIK 264
Query: 279 AL 280
L
Sbjct: 265 LL 266
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KPK + R +TDP ++A R RRERI+ER++ LQ LVP G+K D ASMLDE +Y+KFL+
Sbjct: 125 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 184
Query: 275 SQVKAL 280
QVK L
Sbjct: 185 LQVKVL 190
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 47/56 (83%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+ DPQ++AA+ RRERISER+R+LQ LVP G+K+D +ML++A +Y+KFL+ QVK L
Sbjct: 188 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 243
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
KP+ K +TDPQ+V AR RRE+I+ER++ LQ LVP G+K+D +MLDEA +Y+KFL++
Sbjct: 441 KPRAKRGS-ATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQT 499
Query: 276 QVKALEN 282
QV+ L++
Sbjct: 500 QVELLKS 506
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KPK + R +TDP ++A R RRERI+ER++ LQ LVP G+K D ASMLDE +Y+KFL+
Sbjct: 127 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 186
Query: 275 SQVKAL 280
QVK L
Sbjct: 187 LQVKVL 192
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KPK + R +TDP ++A R RRERI+ER++ LQ LVP G+K D ASMLDE +Y+KFL+
Sbjct: 127 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 186
Query: 275 SQVKAL 280
QVK L
Sbjct: 187 LQVKVL 192
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 47/56 (83%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+ DPQ++AA+ RRERISER+R+LQ LVP G+K+D +ML++A +Y+KFL+ QVK L
Sbjct: 204 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 259
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 47/56 (83%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+ DPQ++AA+ RRERISER+R+LQ LVP G+K+D +ML++A +Y+KFL+ QVK L
Sbjct: 206 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 261
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 16/163 (9%)
Query: 119 PGSTKRKN-IDDHQSEQFHLFQGGGFKLISENPPKAKKPRLDKRPSSANINFQLQASNNS 177
P +KRK+ +++H + Q G K + N +AK+ + K+ S + + + N S
Sbjct: 141 PDKSKRKHMVEEHDGQT----QKRGRK-SARNVGEAKRAKRAKK--SGDEDSSMAIRNGS 193
Query: 178 SVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRR 237
S + D A + A A RP G R +T+PQ++ AR+RR
Sbjct: 194 PTSCCTSDSDSNASLESADGDGDADARRPKGKG--------RAGRSATTEPQSIYARKRR 245
Query: 238 ERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
ERI+ER+++LQ LVP G+K+D ++ML+EA +Y+KFL+ Q++ L
Sbjct: 246 ERINERLKILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIRLL 288
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 50/62 (80%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R N +TDPQ++ AR+RRE+I+ER+R LQ LVP G+K+D ++ML++A +Y+KFL+ Q+K
Sbjct: 185 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIK 244
Query: 279 AL 280
L
Sbjct: 245 LL 246
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 47/56 (83%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+ ++ML+EA Y+KFL+ Q+K L
Sbjct: 244 ATDPQSLYARKRRERINERLRILQHLVPNGTKVHISTMLEEAVQYVKFLQLQIKLL 299
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 51/67 (76%)
Query: 214 VEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFL 273
V+ R +TDPQ++ AR+RRE+I+ER++ LQ LVP G+K+D ++ML+EA +Y+KFL
Sbjct: 163 VKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFL 222
Query: 274 RSQVKAL 280
+ Q+K L
Sbjct: 223 QLQIKLL 229
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP G+K D ASMLDE +Y+KFL+ QVK L
Sbjct: 145 ATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
K K + + DPQ++AA+ RRERISER+R LQ LVP G+K+D +ML++A +Y+KFL+
Sbjct: 205 KAKSPSTTPTKDPQSLAAKNRRERISERLRTLQELVPNGTKVDLVTMLEKAISYVKFLQL 264
Query: 276 QVKAL 280
QVK L
Sbjct: 265 QVKVL 269
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP G+K D ASMLDE +Y+KFL+ QVK L
Sbjct: 145 ATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 45/54 (83%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
DPQ++AAR RRERIS+R+++LQ LVP +K+D +ML++A NY+KFL+ QVK L
Sbjct: 367 DPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVKVL 420
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 48/55 (87%)
Query: 226 TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
TDPQ++ AR+RRE+I+ER++VLQ LVP G+K+D ++ML+EA +Y+KF++ Q+K L
Sbjct: 254 TDPQSLYARKRREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQLQIKLL 308
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
K K + + DPQ++AA+ RRERISER+R LQ LVP G+K+D +ML++A +Y+KFL+
Sbjct: 192 KAKLASTAPTKDPQSLAAKNRRERISERLRALQELVPNGTKVDLVTMLEKAISYVKFLQL 251
Query: 276 QVKAL 280
QVK L
Sbjct: 252 QVKVL 256
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 48/55 (87%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
+TDPQ++ AR+RRERI+ER+++LQ +VP G+K+D ++ML+EA +Y+KFL+ Q+K
Sbjct: 277 ATDPQSLYARKRRERINERLKILQHIVPNGTKVDISTMLEEAVHYVKFLQLQIKV 331
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 51/67 (76%)
Query: 214 VEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFL 273
V+ R +TDPQ++ AR+RRE+I+ER++ LQ LVP G+K+D ++ML+EA +Y+KFL
Sbjct: 163 VKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFL 222
Query: 274 RSQVKAL 280
+ Q+K L
Sbjct: 223 QLQIKLL 229
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 46/56 (82%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI +R+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q K L
Sbjct: 247 ATDPQSLYARKRRERIDDRLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQNKLL 302
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+++LQ LVP G+K+D ++ML+EA +Y+ FL+ Q+K L
Sbjct: 279 ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYVNFLQLQIKLL 334
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 213 VVEKPKRKNVRI-STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLK 271
+KPK K+ + D Q++AA+ RRERISER++VLQ LVP GSK+D +ML++A +Y+K
Sbjct: 225 ATKKPKPKSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSKVDLVTMLEKAISYVK 284
Query: 272 FLRSQVKAL 280
FL+ QVK L
Sbjct: 285 FLQLQVKVL 293
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 50/62 (80%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R + + S D Q++ A++RRERI+ER+R+LQ+LVP G+K+D ++ML+EA Y+KFL+ Q+K
Sbjct: 168 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 227
Query: 279 AL 280
L
Sbjct: 228 LL 229
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 50/62 (80%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R + + S D Q++ A++RRERI+ER+R+LQ+LVP G+K+D ++ML+EA Y+KFL+ Q+K
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 215
Query: 279 AL 280
L
Sbjct: 216 LL 217
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
KP+ K +TDPQ+V AR RRERI+ER++ LQ LVP G+K+D +ML+EA +Y+KFL+
Sbjct: 210 KPRAKRGS-ATDPQSVYARHRRERINERLKTLQHLVPNGAKVDIVTMLEEAIHYVKFLQL 268
Query: 276 QVKAL 280
QV L
Sbjct: 269 QVNML 273
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 47/58 (81%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
+TDPQ+V AR RRE+I+ER++ LQ LVP G+K+D +MLDEA +Y++FL+ QV L++
Sbjct: 449 ATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVTLLKS 506
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
A+AH K + ++A+ R + L KP+ + + DPQ++AAR RRERISER++VLQ
Sbjct: 23 ALAHQK--VSQSASGRALGPALNTNLKPRARQGS-ANDPQSIAARVRRERISERLKVLQA 79
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
L+P G K+D +ML++A Y++ L Q+K L+N
Sbjct: 80 LIPNGDKVDMVTMLEKAITYVQCLELQIKMLKN 112
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERISERI+ LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 149 ATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKVL 204
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 4/68 (5%)
Query: 217 PKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
P R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KF
Sbjct: 235 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKF 294
Query: 273 LRSQVKAL 280
L+ QVK L
Sbjct: 295 LQLQVKVL 302
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 4/68 (5%)
Query: 217 PKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
P R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KF
Sbjct: 234 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKF 293
Query: 273 LRSQVKAL 280
L+ QVK L
Sbjct: 294 LQLQVKVL 301
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 50/66 (75%)
Query: 214 VEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFL 273
V+ R +TDPQ++ AR+RRE+I+ER++ LQ LVP G+K+D ++ML+EA +Y+KFL
Sbjct: 163 VKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFL 222
Query: 274 RSQVKA 279
+ Q+K
Sbjct: 223 QLQIKV 228
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERISERI+ LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 148 ATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKVL 203
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 196 RQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 255
Query: 275 SQVKAL 280
QVK L
Sbjct: 256 VQVKVL 261
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 193 RQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 252
Query: 275 SQVKAL 280
QVK L
Sbjct: 253 VQVKVL 258
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 222 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 281
Query: 275 SQVKAL 280
QVK L
Sbjct: 282 LQVKVL 287
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 5/69 (7%)
Query: 216 KPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLK 271
+PK+K VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+K
Sbjct: 199 QPKQK-VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVK 257
Query: 272 FLRSQVKAL 280
FL+ QVK L
Sbjct: 258 FLQLQVKVL 266
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 44/56 (78%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP G+K D ASMLDE +Y++FL+ QVK L
Sbjct: 145 ATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVEFLQLQVKVL 200
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 250 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 309
Query: 275 SQVKAL 280
QVK L
Sbjct: 310 LQVKVL 315
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 74.7 bits (182), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 46/58 (79%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
+TDPQ+V AR RRE+I+ER+R LQ L+P G K+D +MLDEA +Y++FL+ QV L++
Sbjct: 3 ATDPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQVTLLKS 60
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
A+AH K + + R + L KP+ + + DPQ++AAR RRERISER++VLQ
Sbjct: 613 ALAHQK-VSQSTTSGRALGPALNTNLKPRARQGS-ANDPQSIAARVRRERISERLKVLQA 670
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
L+P G K+D +ML++A +Y++ L Q+K L+N
Sbjct: 671 LIPNGDKVDMVTMLEKAISYVQCLEFQIKMLKN 703
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
+PK++ R +TDP ++A R RRERI+ER+R LQ LVP +K D A+MLDE +Y+KFLR
Sbjct: 123 RPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 182
Query: 275 SQVKAL 280
QVK L
Sbjct: 183 LQVKVL 188
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
DPQ++AAR RRERIS+R+++LQ LVP +K+D +ML++A NY+KFL+ QVK
Sbjct: 367 DPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVKV 419
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 171 KPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 230
Query: 275 SQVKAL 280
QVK L
Sbjct: 231 LQVKVL 236
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 176 ATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVL 231
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 190 AIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 249
A+AH K + + R + L KP+ + + DPQ++AAR RRERISER++VLQ
Sbjct: 796 ALAHQK-VSQSTTSGRALGPALNTNLKPRARQGS-ANDPQSIAARVRRERISERLKVLQA 853
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
L+P G K+D +ML++A +Y++ L Q+K L+N
Sbjct: 854 LIPNGDKVDMVTMLEKAISYVQCLEFQIKMLKN 886
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 214 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 273
Query: 275 SQVKAL 280
QVK L
Sbjct: 274 LQVKVL 279
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 204 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 259
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 228 PQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
PQ+ AA+ RRERISER++VLQ LVP G+K+D +ML++A NY+KFL+ QVK L
Sbjct: 209 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVL 261
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 228 PQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
PQ+ AA+ RRERISER++VLQ LVP G+K+D +ML++A NY+KFL+ QVK L
Sbjct: 202 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVL 254
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 228 PQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
PQ+ AA+ RRERISER++VLQ LVP G+K+D +ML++A NY+KFL+ QVK L
Sbjct: 208 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVL 260
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 253 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 312
Query: 275 SQVKAL 280
QVK L
Sbjct: 313 LQVKVL 318
>gi|357127136|ref|XP_003565241.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 257
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
DPQ+ A+ RRERISER++VLQ LVP G+K+D +ML++A Y+KFL+ QVK L
Sbjct: 171 DPQSAVAKVRRERISERLKVLQDLVPNGTKVDMVTMLEKAITYVKFLQLQVKVL 224
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 47/58 (81%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
+TDPQ+V AR RRE+I+ER++ LQ LVP G+K+D +MLDEA +Y++FL+ QV L++
Sbjct: 3 ATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVTLLKS 60
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER+R LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 123 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 178
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 43/53 (81%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
+TDPQ+V AR RRE+I+ER+R LQ L+P G K+D +MLDEA +Y++FL+ QV
Sbjct: 454 ATDPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQV 506
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER+R LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 187 ATDPHSIAERLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYVKFLRLQVKVL 242
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 49/58 (84%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
+TDPQ+V AR RRE+I+ER++ LQ LVP G+K+D +MLDEA +Y+KFL++QV+ L++
Sbjct: 3 ATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVELLKS 60
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 106 ATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVL 161
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 49/58 (84%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
+TDPQ+V AR RRE+I+ER++ LQ LVP G+K+D +MLDEA +Y+KFL++QV+ L++
Sbjct: 3 ATDPQSVYARHRREKINERLKSLQNLVPNGAKVDIVTMLDEAIHYVKFLQNQVELLKS 60
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 141 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQ 200
Query: 275 SQVKAL 280
QVK L
Sbjct: 201 VQVKVL 206
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER+R LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 122 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 177
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 158 ATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVL 213
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 101 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 160
Query: 275 SQVKAL 280
QVK L
Sbjct: 161 LQVKVL 166
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 47/54 (87%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+PQ++ AR+RRERI+ER++VLQ LVP G+K+D ++ML+EA +Y+KFL+ Q++ L
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLL 275
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 34 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 93
Query: 275 SQVKAL 280
QVK L
Sbjct: 94 LQVKVL 99
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER+R LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 140 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 195
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 4/68 (5%)
Query: 217 PKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
P+++ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KF
Sbjct: 199 PRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKF 258
Query: 273 LRSQVKAL 280
L+ QVK L
Sbjct: 259 LQLQVKVL 266
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 4/68 (5%)
Query: 217 PKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
P+++ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KF
Sbjct: 199 PRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKF 258
Query: 273 LRSQVKAL 280
L+ QVK L
Sbjct: 259 LQLQVKVL 266
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Query: 203 AFRPVNLGLEVVEKPK--RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSK 256
A +P G V +P R VR +TDP ++A R RRERI+ER+R LQ LVP +K
Sbjct: 103 AQQPKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK 162
Query: 257 MDTASMLDEAANYLKFLRSQVKAL 280
D A+MLDE +Y+KFLR QVK L
Sbjct: 163 TDRAAMLDEILDYVKFLRLQVKVL 186
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER+R LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 140 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 195
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 182 ATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVL 237
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER+R LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 31 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 86
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER+R LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 140 ATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 195
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 4/68 (5%)
Query: 217 PKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
P++ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KF
Sbjct: 178 PRQTRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKF 237
Query: 273 LRSQVKAL 280
L+ QVK L
Sbjct: 238 LQLQVKVL 245
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 46/56 (82%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+ DPQ+VAA+ RRE+I+E+++VLQ LVP G+K+D +ML++A Y+KFL+ QVK L
Sbjct: 235 TKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVL 290
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 228 PQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
PQ+ AA+ RRERISER++VLQ LVP G+K+D +ML++A NY+KFL+ QVK L
Sbjct: 224 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVL 276
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER+R LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 139 ATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 194
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 65 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 120
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 171 ATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVL 226
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 164 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVL 219
>gi|414877869|tpg|DAA55000.1| TPA: putative clathrin heavy chain family protein [Zea mays]
Length = 898
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 47/54 (87%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+PQ++ AR+RRERI+ER++VLQ LVP G+K+D ++ML+EA +Y+KFL+ Q++ +
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLI 275
>gi|225444197|ref|XP_002270265.1| PREDICTED: transcription factor bHLH52-like [Vitis vinifera]
Length = 283
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 206 PVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDE 265
P G VE +K R S Q++AARQRR +I+E+ + L +L+PGG+KM+TA M
Sbjct: 138 PAFYGCGSVESSGKKGCRESLSAQSIAARQRRRKITEKTQELGKLIPGGNKMNTAEMFQA 197
Query: 266 AANYLKFLRSQVKALENPG 284
A Y+K+L++QV L+ G
Sbjct: 198 AFKYVKYLQAQVAILQLMG 216
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 176 ATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVL 231
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER+R LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 188 ATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 243
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 173 ATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVL 228
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 46/56 (82%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+ DPQ+VAA+ RRE+I+E+++VLQ LVP G+K+D +ML++A Y+KFL+ QVK L
Sbjct: 201 TKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVL 256
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 156 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 215
Query: 275 SQVKA 279
QVKA
Sbjct: 216 LQVKA 220
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
Query: 198 IYRAAAFRPVNLGLEVVEKPK--RKNVRI----STDPQTVAARQRRERISERIRVLQRLV 251
++RA +P G V +P R VR +TDP ++A R RRERI+ER+R LQ LV
Sbjct: 98 VFRAQ--QPKQGGAGVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELV 155
Query: 252 PGGSKMDTASMLDEAANYLKFLRSQVKAL 280
P +K D A MLDE +Y+KFLR QVK L
Sbjct: 156 PNTNKTDRAVMLDEILDYVKFLRLQVKVL 184
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERISERI+ LQ LVP +K D A+++DE +Y+KFLR QVK L
Sbjct: 141 ATDPHSIAERLRRERISERIKALQELVPNCNKTDRAALVDEILDYVKFLRLQVKVL 196
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D A+M+DE +Y+KFLR QVK L
Sbjct: 170 ATDPHSIAERLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYVKFLRLQVKVL 225
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 210 GLEVVEKPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAAN 268
G V KP+ + R +TDP ++A R RRE+ISER++ LQ LVP +K D +SMLDE +
Sbjct: 312 GNSVSAKPRSRARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKADKSSMLDEIID 371
Query: 269 YLKFLRSQVKAL 280
Y+KFL+ QVK L
Sbjct: 372 YVKFLQLQVKVL 383
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 202 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 257
>gi|296089224|emb|CBI38996.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 206 PVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDE 265
P G VE +K R S Q++AARQRR +I+E+ + L +L+PGG+KM+TA M
Sbjct: 119 PAFYGCGSVESSGKKGCRESLSAQSIAARQRRRKITEKTQELGKLIPGGNKMNTAEMFQA 178
Query: 266 AANYLKFLRSQVKALENPG 284
A Y+K+L++QV L+ G
Sbjct: 179 AFKYVKYLQAQVAILQLMG 197
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 195 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 250
>gi|413920361|gb|AFW60293.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 47/58 (81%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R S D Q++ A++RRERI+E++R LQ+L+P G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 172 RSSKDSQSLYAKRRRERINEKLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLL 229
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 266 ATDPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 321
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 42/56 (75%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE Y+KFL+ QVK L
Sbjct: 37 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQLQVKVL 92
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRE+I+ER++ LQ LVP SK+D ASMLDE Y+KFL+ QVK L
Sbjct: 358 ATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQLQVKVL 413
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 266 ATDPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 321
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 48/58 (82%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R S + Q++ A++RRERI+E++RVLQ+L+P G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 168 RPSKNMQSLYAKKRRERINEKLRVLQQLIPNGTKVDISTMLEEAVQYVKFLQLQIKVL 225
>gi|242069235|ref|XP_002449894.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
gi|241935737|gb|EES08882.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
Length = 242
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 53/73 (72%), Gaps = 4/73 (5%)
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL--ENPG 284
D Q++ A++RRERI+ER+R LQ+L+P G+K+D ++ML+EA Y+KFL+ Q+K L E+
Sbjct: 160 DLQSLYAKRRRERINERLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLLSSEDTW 219
Query: 285 HQKP--DHHHSMN 295
P +H SM+
Sbjct: 220 MYAPLAYNHMSMD 232
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 38 ATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 93
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 39 ATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 94
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+ISER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 312 KPRTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 371
Query: 275 SQVKAL 280
QVK L
Sbjct: 372 LQVKVL 377
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K R + D Q+ A++RR+RI+ER+R+LQ+L+P G+K+D ++ML+EA Y+KFL Q+K
Sbjct: 97 KKSRAAKDSQSHYAKKRRQRINERLRILQKLIPNGTKVDISTMLEEAVQYVKFLHLQIKL 156
Query: 280 L 280
L
Sbjct: 157 L 157
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 204 FRPVNLGLEVVEKPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASM 262
+P ++G V KP+ + R +TDP ++A R RRE+IS+R++ LQ LVP +K D ASM
Sbjct: 305 IQPNSVGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASM 364
Query: 263 LDEAANYLKFLRSQVKAL 280
LDE +Y+KFL+ QVK L
Sbjct: 365 LDEIIDYVKFLQLQVKVL 382
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVRI-STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+ISER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 275 SQVKAL 280
QVK L
Sbjct: 373 LQVKVL 378
>gi|255586237|ref|XP_002533773.1| DNA binding protein, putative [Ricinus communis]
gi|223526310|gb|EEF28618.1| DNA binding protein, putative [Ricinus communis]
Length = 288
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Query: 173 ASNNSSVSSSIEEPD--PEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQT 230
A ++ V+SS+ PD PE A + + ++F V+KP S Q+
Sbjct: 112 AFSDGYVASSVPVPDFTPEIPASLPKFETPLSSFSVGRSESSCVKKPNGG----SLSAQS 167
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
+AAR+RR +I+ER + L +L+PGG+KM+TA ML A+NY+KFL++QV LE
Sbjct: 168 IAARERRRKITERTQELGKLIPGGNKMNTAEMLQSASNYVKFLQAQVGILE 218
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+ISER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 275 SQVKAL 280
QVK L
Sbjct: 373 LQVKVL 378
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVRI-STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+ISER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 275 SQVKAL 280
QVK L
Sbjct: 373 LQVKVL 378
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 204 FRPVNLGLEVVEKPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASM 262
+P ++G V KP+ + R +TDP ++A R RRE+IS+R++ LQ LVP +K D ASM
Sbjct: 305 IQPNSVGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASM 364
Query: 263 LDEAANYLKFLRSQVKAL 280
LDE +Y+KFL+ QVK L
Sbjct: 365 LDEIIDYVKFLQLQVKVL 382
>gi|357492173|ref|XP_003616375.1| Transcription factor bHLH83 [Medicago truncatula]
gi|355517710|gb|AES99333.1| Transcription factor bHLH83 [Medicago truncatula]
Length = 325
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 14/70 (20%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK--------------MDTASMLDEAANYL 270
S DPQ+VAA+ RRERISER+++LQ LVP GSK +D +ML++A +Y+
Sbjct: 225 SKDPQSVAAKNRRERISERLKILQELVPNGSKVDFQISPQSYVAFFVDLVTMLEKAISYV 284
Query: 271 KFLRSQVKAL 280
KFL+ QVK L
Sbjct: 285 KFLQLQVKVL 294
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 45/56 (80%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ+V AR RRE+I+ER++ LQRLVP G ++D +ML+EA +++KFL Q++ L
Sbjct: 477 ATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLELL 532
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRE+I+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 143 ATDPHSIAERLRREKIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 198
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVRI-STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+ISER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 236 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 295
Query: 275 SQVKAL 280
QVK L
Sbjct: 296 LQVKVL 301
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 11 ATDPHSIAERLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQLQVKVL 66
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 205 RPVNLGLEVVEKPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASML 263
+P + G V KP+ + R +TDP ++A R RRE+IS+R++ LQ LVP +K D ASML
Sbjct: 306 QPNSAGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKADKASML 365
Query: 264 DEAANYLKFLRSQVKAL 280
DE +Y+KFL+ QVK L
Sbjct: 366 DEIIDYVKFLQLQVKVL 382
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 213 VVEKPKRKNVRI-STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLK 271
V +KP+ + R +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE Y++
Sbjct: 93 VRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVR 152
Query: 272 FLRSQVKAL 280
FL+ QVK L
Sbjct: 153 FLQLQVKVL 161
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 42/55 (76%)
Query: 226 TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 221 TDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 275
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 213 VVEKPKRKNVRI-STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLK 271
V +KP+ + R +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE Y++
Sbjct: 93 VRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVR 152
Query: 272 FLRSQVKAL 280
FL+ QVK L
Sbjct: 153 FLQLQVKVL 161
>gi|125596454|gb|EAZ36234.1| hypothetical protein OsJ_20554 [Oryza sativa Japonica Group]
Length = 189
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 41/43 (95%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEA 266
+S++PQ+VAAR RRER+S+R+R LQRLVPGG+++DTASML+EA
Sbjct: 120 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEA 162
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+ISER++ LQ LVP +K D +SMLDE +Y+KFL+
Sbjct: 316 KPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQ 375
Query: 275 SQVKAL 280
QVK L
Sbjct: 376 LQVKVL 381
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 218 KRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
+R+ +TDPQ++AAR RRE+ ++RIR+LQ LVP G ++DT ML + Y++FL+ +V
Sbjct: 675 QRRRHGTATDPQSIAARTRREKFTDRIRILQSLVPNGERLDTVHMLSQTFEYVRFLQHKV 734
Query: 278 KALEN 282
L N
Sbjct: 735 WDLYN 739
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+ISER++ LQ LVP +K D +SMLDE +Y+KFL+
Sbjct: 317 KPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQ 376
Query: 275 SQVKAL 280
QVK L
Sbjct: 377 LQVKVL 382
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 20/174 (11%)
Query: 111 IVHQEELRPGSTKRKNIDDHQSEQFHLFQGGGFKLISENPPKAKKPRLDKRPSSANINFQ 170
++ Q+ + + N+DD H+ G G+ + E RLDK +S +
Sbjct: 145 LMGQDRIEGSGLRGGNLDDD----MHIM-GKGYMGMDE------ILRLDKLSASPTTEGK 193
Query: 171 LQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRI----ST 226
+ + SS I EP+ + + + + PV E + VR +T
Sbjct: 194 -EDLQSCPFSSGIAEPNVNMSMNQLSSMPQTTSAAPV----EGCNGTGKTRVRARRGHAT 248
Query: 227 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
DP ++A R RRE+I+ER++ LQ LVP +K+D ASMLDE Y+KFL+ QVK L
Sbjct: 249 DPHSIAERLRREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQLQVKVL 302
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
R+ VR +T P ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 257 RQRVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 316
Query: 275 SQVKAL 280
QVK L
Sbjct: 317 LQVKVL 322
>gi|168057236|ref|XP_001780622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667988|gb|EDQ54605.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 835
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 213 VVEKPKRKNVR---ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANY 269
VV P K R +TDPQ++AAR RRE+ ++RIR+LQ LVP G ++DT ML + Y
Sbjct: 666 VVSPPAPKQRRRHGTATDPQSIAARTRREKFTDRIRILQGLVPNGERLDTVHMLSQTFEY 725
Query: 270 LKFLRSQVKALEN 282
++FL+ +V L N
Sbjct: 726 VRFLQHKVWDLYN 738
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y++FL+ QVK L
Sbjct: 201 ATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFLQLQVKVL 256
>gi|358347412|ref|XP_003637751.1| LAX [Medicago truncatula]
gi|355503686|gb|AES84889.1| LAX [Medicago truncatula]
Length = 298
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 49/66 (74%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
K ++K + Q++AAR+RR +I+E+ + L +LVPGG KM+TA ML+ AANY+KFL++
Sbjct: 155 KIEKKVTERTISSQSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLNAAANYVKFLQA 214
Query: 276 QVKALE 281
QV L+
Sbjct: 215 QVGMLQ 220
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 13/69 (18%)
Query: 225 STDPQTVAAR-------------QRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLK 271
+TDPQ++ AR +RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+K
Sbjct: 244 ATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVK 303
Query: 272 FLRSQVKAL 280
FL+ Q+K L
Sbjct: 304 FLQLQIKLL 312
>gi|125555439|gb|EAZ01045.1| hypothetical protein OsI_23077 [Oryza sativa Indica Group]
Length = 294
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 229 QTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
Q+ AA+ RRERISER+R LQ LVP G K+D +MLD A +Y+KF++ Q++ LE
Sbjct: 200 QSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVLET 253
>gi|52077404|dbj|BAD46515.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|125597317|gb|EAZ37097.1| hypothetical protein OsJ_21438 [Oryza sativa Japonica Group]
Length = 294
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 229 QTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
Q+ AA+ RRERISER+R LQ LVP G K+D +MLD A +Y+KF++ Q++ LE
Sbjct: 200 QSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVLET 253
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RR RI+ER++ LQ LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 27 ATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLRLQVKVL 82
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVRI-STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+I+ER++ LQ LVP +K D ASMLDE Y+KFL+
Sbjct: 293 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 352
Query: 275 SQVKAL 280
QVK L
Sbjct: 353 LQVKVL 358
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RR RI+ER++ LQ LVP +K D A+MLDE +Y+KFLR Q+K L
Sbjct: 23 ATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLRLQIKVL 78
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 247 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 306
Query: 275 SQVKALENPG 284
QV ++ G
Sbjct: 307 LQVLSMSRLG 316
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+IS+R++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 314 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 373
Query: 275 SQVKAL 280
QVK L
Sbjct: 374 LQVKVL 379
>gi|140084384|gb|ABO84936.1| Rhd6-like 7 [Physcomitrella patens]
Length = 67
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 46/58 (79%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
+TDPQ+V AR RRE+I+ER++ LQRLVP G ++D +ML+EA +++KFL Q++ L +
Sbjct: 3 ATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLELLRS 60
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+IS+R++ LQ LVP +K D ASMLDE +Y+KFL+
Sbjct: 279 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 338
Query: 275 SQVKAL 280
QVK L
Sbjct: 339 LQVKVL 344
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPG 284
+TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QV ++ G
Sbjct: 246 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVLSMSRLG 305
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRE+I+ER++ LQ LVP +K D ASMLDE Y+KFL+ QVK L
Sbjct: 156 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVL 211
>gi|224061589|ref|XP_002300555.1| predicted protein [Populus trichocarpa]
gi|222847813|gb|EEE85360.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 48/67 (71%)
Query: 218 KRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
K+ + +S Q++AAR+RR +I+E+ + L +L+PGG+KM+TA M A+ Y+KFL++Q+
Sbjct: 161 KKPSTGVSLSAQSIAARERRRKITEKTQQLGKLIPGGNKMNTAEMFQAASKYVKFLQAQI 220
Query: 278 KALENPG 284
LE G
Sbjct: 221 GILELTG 227
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 204 FRPVNLGLEVVEKPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASM 262
+P ++G V KP+ + R +TDP ++A R RRE+IS+R++ LQ LVP +K D ASM
Sbjct: 305 IQPNSVGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASM 364
Query: 263 LDEAANYLKFLRSQVKAL 280
LDE +++KFL+ QVK L
Sbjct: 365 LDEIIDHVKFLQLQVKVL 382
>gi|346682821|gb|AEO45564.1| abscisic acid-responsive protein bHLH2 [Populus koreana]
Length = 297
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 48/67 (71%)
Query: 218 KRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
K+ + +S Q++AAR+RR +I+E+ + L +L+PGG+KM+TA M A+ Y+KFL++Q+
Sbjct: 160 KKPSTGVSLSAQSIAARERRRKITEKTQQLGKLIPGGNKMNTAEMFQAASKYVKFLQAQI 219
Query: 278 KALENPG 284
LE G
Sbjct: 220 GILELTG 226
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 7/68 (10%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM---DTASMLDEAANYLK 271
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K+ D ASMLDE +Y+K
Sbjct: 247 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVK 306
Query: 272 FLRSQVKA 279
FL+ QVKA
Sbjct: 307 FLQLQVKA 314
>gi|357444409|ref|XP_003592482.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481530|gb|AES62733.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 157
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPD 289
+ +RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L + P
Sbjct: 81 VIMILRRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSMWMY-API 139
Query: 290 HHHSMNYPPTNLAFSS 305
++ MN +L+FSS
Sbjct: 140 AYNGMNI-GLDLSFSS 154
>gi|224117892|ref|XP_002317694.1| predicted protein [Populus trichocarpa]
gi|222860759|gb|EEE98306.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 218 KRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
K+ + +S Q++AAR+RR +I+E+ R L + +PGG KM+TA M A+ Y+KFL++Q+
Sbjct: 162 KKPSTGVSLSTQSIAARERRRKITEKTRELGKFIPGGHKMNTAEMFQAASKYVKFLQAQI 221
Query: 278 KALENPG 284
LE G
Sbjct: 222 GILELMG 228
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 217 PKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
P R+ VR +TDP ++A R RRERI+ER++ LQ LV +K D ASMLDE +Y+KF
Sbjct: 140 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKF 199
Query: 273 LRSQVKALENPG 284
L+ QV ++ G
Sbjct: 200 LQLQVLSMSRLG 211
>gi|315175249|gb|ADT82843.1| barren stalk1/lax panicle1 [Pharus latifolius]
Length = 141
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 38/43 (88%)
Query: 235 QRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 1 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 43
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 7/68 (10%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM---DTASMLDEAANYLK 271
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE +Y+K
Sbjct: 235 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVK 294
Query: 272 FLRSQVKA 279
FL+ QVKA
Sbjct: 295 FLQLQVKA 302
>gi|449493201|ref|XP_004159220.1| PREDICTED: uncharacterized protein LOC101232790 [Cucumis sativus]
Length = 312
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 44/55 (80%)
Query: 228 PQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
P++ ARQRR+++S++ R LQ+L+P KMD A+ML+EA Y+KFL++Q+ AL++
Sbjct: 180 PRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 234
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 229 QTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
Q+ A+ RR+RI+ER+R+LQ L+P G+K+D ++ML+EA Y+KFL Q+K L
Sbjct: 119 QSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLL 170
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 217 PKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
P R+ VR +TDP ++A R RRERI+ER++ LQ LV +K D ASMLDE +Y+KF
Sbjct: 112 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKF 171
Query: 273 LRSQVKALENPG 284
L+ QV ++ G
Sbjct: 172 LQLQVLSMSRLG 183
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVRI-STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+IS+R++ LQ LVP ++ D ASMLDE Y+KFL+
Sbjct: 295 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQ 354
Query: 275 SQVKAL 280
QVK L
Sbjct: 355 LQVKVL 360
>gi|222619489|gb|EEE55621.1| hypothetical protein OsJ_03959 [Oryza sativa Japonica Group]
Length = 166
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 38/42 (90%)
Query: 222 VRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASML 263
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDTA+++
Sbjct: 11 AKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTAALV 52
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVRI-STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+IS+R++ LQ LVP +K + ASMLDE +Y+KFL+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 275 SQVKAL 280
QVK L
Sbjct: 371 LQVKVL 376
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVRI-STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+IS+R++ LQ LVP +K + ASMLDE +Y+KFL+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 275 SQVKAL 280
QVK L
Sbjct: 371 LQVKVL 376
>gi|315175247|gb|ADT82842.1| barren stalk1/lax panicle1 [Streptochaeta angustifolia]
Length = 125
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 38/43 (88%)
Query: 235 QRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++Q+
Sbjct: 1 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQI 43
>gi|315175245|gb|ADT82841.1| barren stalk1/lax panicle1 [Joinvillea ascendens]
Length = 140
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 38/43 (88%)
Query: 236 RRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
RR RIS+R RVL+ LVPGGSKMDT SML++A +Y++FL++Q++
Sbjct: 1 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIDYVQFLKAQIR 43
>gi|315175251|gb|ADT82844.1| barren stalk1/lax panicle1 [Miscanthus sinensis]
Length = 162
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 37/42 (88%)
Query: 236 RRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++Q+
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQI 43
>gi|315175241|gb|ADT82839.1| barren stalk1/lax panicle1 [Chasmanthium latifolium]
Length = 151
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 235 QRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL+ Q+
Sbjct: 1 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKGQI 43
>gi|125536776|gb|EAY83264.1| hypothetical protein OsI_38473 [Oryza sativa Indica Group]
Length = 198
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 229 QTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
Q A+ RR+RI+ER+R+LQ L+P G+K+D ++ML+EA Y+KFL Q+K L
Sbjct: 119 QPYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLL 170
>gi|449435928|ref|XP_004135746.1| PREDICTED: uncharacterized protein LOC101220022 [Cucumis sativus]
gi|449515945|ref|XP_004165008.1| PREDICTED: uncharacterized protein LOC101226994 [Cucumis sativus]
Length = 308
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 229 QTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
QT+AAR+RR +I+ + + L LVPGGSKM+TA ML+ A Y+KFL++QV L+
Sbjct: 189 QTIAARERRRKITVKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ 241
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 216 KPKRKNVRI-STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KP+ + R +TDP ++A R RRE+IS+R++ LQ LVP ++ D ASMLDE Y+KFL+
Sbjct: 295 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQ 354
Query: 275 SQVK 278
QVK
Sbjct: 355 LQVK 358
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 41/56 (73%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRE+IS+R++ LQ LVP +K D ASML+E Y+KFL+ Q K L
Sbjct: 289 ATDPHSIAERLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQLQTKVL 344
>gi|255549295|ref|XP_002515701.1| DNA binding protein, putative [Ricinus communis]
gi|223545138|gb|EEF46648.1| DNA binding protein, putative [Ricinus communis]
Length = 244
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 224 ISTDPQTVAARQR-RERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE- 281
+S++P RQR R+ + ++ R+LQ+L+P +MDTA+ML EA NY+ FL++QVKAL+
Sbjct: 100 LSSNPSQKNKRQRCRQTMGDKFRILQKLMPWDKRMDTATMLAEAYNYINFLQAQVKALQA 159
Query: 282 NPGHQKPDH-HHSMN 295
P P HHS N
Sbjct: 160 MPLFDDPTSTHHSFN 174
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%), Gaps = 7/76 (9%)
Query: 212 EVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLD 264
+V ++P + + + +TD ++A R RRE+ISER+++LQ+LVPG K+ A MLD
Sbjct: 171 KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLD 230
Query: 265 EAANYLKFLRSQVKAL 280
E NY++FL++QV+ L
Sbjct: 231 EIINYVQFLQNQVEFL 246
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 10/68 (14%)
Query: 219 RKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM------DTASMLDEAAN 268
R+ VR +TDP ++A R RRERI+ER++ LQ LVP +K+ D ASMLDE +
Sbjct: 282 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIID 341
Query: 269 YLKFLRSQ 276
Y+KFL+ Q
Sbjct: 342 YVKFLQLQ 349
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 34/148 (22%)
Query: 140 GGGFKLISENPPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDPEAIAHMKEMIY 199
GGG L P+AK+ + +K +SNN+ + E DP +
Sbjct: 67 GGGQDLTD---PEAKRSKTNK------------SSNNNGSLRTEAETDPRS--------- 102
Query: 200 RAAAFRPVNLGLEVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPG 253
A + V+ L E PK+ + + +TD ++A R RRE+ISER++VLQ LVPG
Sbjct: 103 ---AGKAVSKSLPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPG 159
Query: 254 GSK-MDTASMLDEAANYLKFLRSQVKAL 280
+K + AS+LDE NY++ L+ QV+ L
Sbjct: 160 CNKVIGKASVLDEIINYIQSLQCQVEFL 187
>gi|357453543|ref|XP_003597049.1| Transcription factor bHLH117 [Medicago truncatula]
gi|355486097|gb|AES67300.1| Transcription factor bHLH117 [Medicago truncatula]
Length = 285
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 42/55 (76%)
Query: 228 PQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
PQ+ ARQRR+++SE+ R LQ+L+P +MD A++ +EA Y+KFL++Q+ L++
Sbjct: 146 PQSNLARQRRQKLSEKTRCLQKLMPWDKRMDQATLYEEAYKYVKFLQAQLSVLQS 200
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 22/137 (16%)
Query: 145 LISENPPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAF 204
L+SEN K+PR P+ + Q SS ++IE K + ++ A
Sbjct: 255 LMSENMSGMKRPRDSSEPAQNGLAHQFSLPKTSSEMAAIE----------KFLQFQDAV- 303
Query: 205 RPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASML 263
P + R +T P+++A R RR RISERIR LQ LVP K +TA ML
Sbjct: 304 -PCKI---------RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADML 353
Query: 264 DEAANYLKFLRSQVKAL 280
D A +Y+K L+ QVK +
Sbjct: 354 DLAVDYIKELQEQVKVI 370
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 19/110 (17%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
E PK+ + + +TD ++A R RRE+ISER+ +LQ LVPG +K + AS+LDE
Sbjct: 122 EAPKQDYIHVRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEII 181
Query: 268 NYLKFLRSQVKALE----------NPGHQK--PDHHHSMNYPPTNLAFSS 305
NY++ L+ QV+ L NPG + P + Y +LAFSS
Sbjct: 182 NYIQALQRQVEFLSMKLEAVNSQMNPGIEGFPPKDFGAQAYETPSLAFSS 231
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 26/147 (17%)
Query: 140 GGGFK----LISENPPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDPEAIAHMK 195
G G++ L+S+N K+PR P + + Q SS ++IE K
Sbjct: 231 GSGWEDSSALLSDNLSGVKRPRDSSEPGQSGLTHQFSVPKTSSEMATIE----------K 280
Query: 196 EMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGS 255
+ ++ A P + R +T P+++A R RR +ISERIR LQ LVP
Sbjct: 281 FLQFQDAV--PCKI---------RAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMD 329
Query: 256 K-MDTASMLDEAANYLKFLRSQVKALE 281
K +T+ MLD A +Y+K L+ QVK L+
Sbjct: 330 KQTNTSDMLDLAVDYIKDLQKQVKVLK 356
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 20/116 (17%)
Query: 210 GLEVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASM 262
G + ++PK + + + +T+ ++A R RRE+ISER++ LQ LVPG SK+ A M
Sbjct: 355 GSQGSDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 414
Query: 263 LDEAANYLKFLRSQVKALE------NP-------GHQKPDHHHSMNYPPTNLAFSS 305
LDE NY++ L+ QV+ L NP G D S PP++LAFSS
Sbjct: 415 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQSRAVPPSSLAFSS 470
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 236 RRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 296
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 22/137 (16%)
Query: 145 LISENPPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAF 204
L+SEN K+PR P+ + Q SS ++IE K + ++ A
Sbjct: 248 LMSENMSGMKRPRDSSEPAQNGLAHQFSLPKTSSEMAAIE----------KFLQFQDAV- 296
Query: 205 RPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASML 263
P + R +T P+++A R RR RISERIR LQ LVP K +TA ML
Sbjct: 297 -PCKI---------RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADML 346
Query: 264 DEAANYLKFLRSQVKAL 280
D A +Y+K L+ QVK +
Sbjct: 347 DLAVDYIKELQEQVKVI 363
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 236 RRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 251 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 295
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 236 RRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 296
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RIS+RIR LQ LVP K +TA MLDEA Y+KFL++Q++ L
Sbjct: 124 FATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEEL 181
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++VLQRLVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 154 ATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 210
>gi|223702440|gb|ACN21651.1| putative basic helix-loop-helix protein BHLH15 [Lotus japonicus]
Length = 274
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 215 EKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
+KP K + T A++R+E++ ERI LQ+LV K DTAS+L EA Y+KFL+
Sbjct: 145 QKPPYKKTKAENPTSTGHAKKRKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIKFLQ 204
Query: 275 SQVKALENPGHQK 287
QV+ L +P Q+
Sbjct: 205 DQVQVLCSPYLQR 217
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 152 RLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 198
>gi|242037067|ref|XP_002465928.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
gi|241919782|gb|EER92926.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
Length = 287
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 229 QTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
Q AARQRR+RISE+ L RL+PG K++TA ML+EAA ++K L++QV L
Sbjct: 155 QKSAARQRRKRISEKTAELARLIPGAHKLNTAEMLEEAARHVKLLQAQVGVL 206
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 26/152 (17%)
Query: 135 FHLFQGGGFK----LISENPPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDPEA 190
+ + G G++ L+S+N K+PR P + I Q SS +SI+
Sbjct: 219 YPMGSGSGWEDSSALMSDNLSGLKRPRDSSEPGQSRITHQFSLPKTSSEMASID------ 272
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
K + ++ A P + R +T P+++A R RR +ISERIR LQ L
Sbjct: 273 ----KFLQFQDAV--PCKI---------RAKRGCATHPRSIAERVRRTKISERIRKLQEL 317
Query: 251 VPGGSK-MDTASMLDEAANYLKFLRSQVKALE 281
VP K +T+ MLD A +Y+K L+ QVK L+
Sbjct: 318 VPNMDKQTNTSDMLDLAVDYIKELQKQVKVLK 349
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++VLQRLVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 171 ATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 227
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 202 AAFRPVNLGLEVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGS 255
+A + V+ + E PK+ + + +TD ++A R RRE+ISER++VLQ LVPG +
Sbjct: 104 SAGKAVSKNIPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCN 163
Query: 256 K-MDTASMLDEAANYLKFLRSQVKAL 280
K + AS+LDE NY++ L+ QV+ L
Sbjct: 164 KVIGKASVLDEIINYIQSLQCQVEFL 189
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 5/73 (6%)
Query: 213 VVEKPKRKNVRI-----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAA 267
V EKP R+ R+ + ++ R+RR++I+E+IR L+ L+P +KMD ASMLD+A
Sbjct: 192 VKEKPVREGNRVKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAI 251
Query: 268 NYLKFLRSQVKAL 280
+YLK L+ Q++ +
Sbjct: 252 DYLKTLKLQLQIM 264
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 153 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 209
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER++ LQ LVPG SK M AS LDE NY++ L+ QV+ L
Sbjct: 139 ATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEFL 195
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 150 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 206
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 153 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 209
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 160 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 216
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 5/73 (6%)
Query: 213 VVEKPKRKNVRI-----STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAA 267
V EKP R+ R+ + ++ R+RR++I+E+IR L+ L+P +KMD ASMLD+A
Sbjct: 192 VKEKPVRERNRVKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAI 251
Query: 268 NYLKFLRSQVKAL 280
+YLK L+ Q++ +
Sbjct: 252 DYLKTLKLQLQIM 264
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 150 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 206
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 10/100 (10%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALE-- 281
+TD ++A R RRE+IS+R+++LQ LVPG +K + A MLDE NY++ L+ QV+ L
Sbjct: 259 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMK 318
Query: 282 ----NPGHQKPDHHHSMNYPPTNLAFSSLPFNNNSFPVQT 317
NP + D ++ N P ++ S P N+ FP++T
Sbjct: 319 LATVNP---QLDFNNLPNLLPKDMHQSCGPLQNSHFPLET 355
>gi|326501126|dbj|BAJ98794.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 213 VVEKPKRKNVRISTDPQ--TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYL 270
+V +P R R + Q +A R+RRE++SER L ++VPG KMD AS+L +A Y+
Sbjct: 148 MVAEPARAPSRPAAQNQDHILAERKRREKLSERFIALSKIVPGLKKMDKASVLGDAIKYV 207
Query: 271 KFLRSQVKALENPGHQKP 288
K L+ QVK +E ++P
Sbjct: 208 KTLQEQVKGMEEVARRRP 225
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
V+KP +VR +TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE N
Sbjct: 241 VQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 300
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 301 YVQSLQRQVEFL 312
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 10/100 (10%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALE-- 281
+TD ++A R RRE+IS+R+++LQ LVPG +K + A MLDE NY++ L+ QV+ L
Sbjct: 259 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMK 318
Query: 282 ----NPGHQKPDHHHSMNYPPTNLAFSSLPFNNNSFPVQT 317
NP + D ++ N P ++ S P N+ FP++T
Sbjct: 319 LATVNP---QLDFNNLPNLLPKDMHQSCGPLQNSHFPLET 355
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 236 RRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
RRERI+ER++ LQ LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 142 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 186
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 150 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 206
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 153 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 209
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+++++ LQ+LVP SK D ASMLDE YLK L++QV+A+
Sbjct: 257 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQAM 303
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 10/100 (10%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALE-- 281
+TD ++A R RRE+IS+R+++LQ LVPG +K + A MLDE NY++ L+ QV+ L
Sbjct: 287 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMK 346
Query: 282 ----NPGHQKPDHHHSMNYPPTNLAFSSLPFNNNSFPVQT 317
NP + D ++ N P ++ S P N+ FP++T
Sbjct: 347 LATVNP---QLDFNNLPNLLPKDIHQSCGPLQNSHFPLET 383
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
V+KP +VR +TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE N
Sbjct: 241 VQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 300
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 301 YVQSLQRQVEFL 312
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALENP 283
+T P+++A R RR RIS+RIR LQ LVP K +TA MLDEA Y+KFL+ Q++ L
Sbjct: 88 ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQIEELSE- 146
Query: 284 GHQK 287
HQ+
Sbjct: 147 -HQR 149
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQRLVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 179 ATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 235
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 8/74 (10%)
Query: 215 EKPKRKNVR--ISTDPQTVAA------RQRRERISERIRVLQRLVPGGSKMDTASMLDEA 266
EK KR N + +ST AA R+RR++I++R++ LQ+LVP SK D ASMLDE
Sbjct: 253 EKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEV 312
Query: 267 ANYLKFLRSQVKAL 280
YLK L++QV+ +
Sbjct: 313 IEYLKQLQAQVQMM 326
>gi|239051052|ref|NP_001132631.2| uncharacterized protein LOC100194106 [Zea mays]
gi|238908727|gb|ACF81557.2| unknown [Zea mays]
gi|414872549|tpg|DAA51106.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 364
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
+A R+RRE++S+R L ++VPG KMD AS+L +A Y+K L+ QVK LE+ ++P
Sbjct: 189 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDDARRRP 246
>gi|294460878|gb|ADE76012.1| unknown [Picea sitchensis]
Length = 171
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
+S DPQ++AAR RR +I +R ++LQ +VPGG MDT SMLDEA Y+KFL+
Sbjct: 37 LSMDPQSIAARHRRHKIRKRFKILQSMVPGGKNMDTVSMLDEAIQYVKFLQ 87
>gi|226529722|ref|NP_001147789.1| symbiotic ammonium transporter [Zea mays]
gi|195613768|gb|ACG28714.1| symbiotic ammonium transporter [Zea mays]
Length = 359
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
+A R+RRE++S+R L ++VPG KMD AS+L +A Y+K L+ QVK LE+ ++P
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDDARRRP 241
>gi|4206118|gb|AAD11428.1| transporter homolog [Mesembryanthemum crystallinum]
Length = 300
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 218 KRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
K ++ + + +A R+RRE++++R L LVPG KMD AS+L +AA YLK L QV
Sbjct: 108 KFGSIGLCSQEHVLAERKRREKMTQRFHALSALVPGLKKMDKASILGDAAKYLKQLEEQV 167
Query: 278 KALE 281
K LE
Sbjct: 168 KLLE 171
>gi|226501366|ref|NP_001148121.1| symbiotic ammonium transporter [Zea mays]
gi|195615934|gb|ACG29797.1| symbiotic ammonium transporter [Zea mays]
Length = 340
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
+A R+RRE++S+R L ++VPG KMD AS+L +A Y+K L+ QVK LE+ ++P
Sbjct: 162 ILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDDARRRP 220
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 207 VNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEA 266
++ E +KP R + ++ R+RR+RI+E++R LQ LVP +K D ASMLDEA
Sbjct: 220 ADVTCETAQKPATAKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNKTDKASMLDEA 279
Query: 267 ANYLKFLRSQVKALENPG 284
YLK L+ Q++ + G
Sbjct: 280 IEYLKSLQLQLQVMWAMG 297
>gi|413933203|gb|AFW67754.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 341
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
+A R+RRE++S+R L ++VPG KMD AS+L +A Y+K L+ QVK LE+ ++P
Sbjct: 165 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDDARRRP 222
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RIS+RIR LQ LVP K +TA ML+EA +Y+KFL+ Q++ L
Sbjct: 194 CATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQIQEL 251
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVK 278
+TD ++A R RRERISER+R LQ LVPG SK+ A MLDE NY++ L+ QV+
Sbjct: 153 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVE 207
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RIS+RIR LQ LVP K +TA MLDEA Y+KFL+ Q++ L
Sbjct: 177 ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQRQIQEL 233
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 20/115 (17%)
Query: 210 GLEVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASM 262
G + + PK + + + +T+ ++A R RRE+ISER++ LQ LVPG SK+ A M
Sbjct: 357 GSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 416
Query: 263 LDEAANYLKFLRSQVKALE------NP-------GHQKPDHHHSMNYPPTNLAFS 304
LDE NY++ L+ QV+ L NP G D HS P + LAFS
Sbjct: 417 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILHSRAVPSSTLAFS 471
>gi|115455061|ref|NP_001051131.1| Os03g0725800 [Oryza sativa Japonica Group]
gi|41469283|gb|AAS07165.1| putative symbiotic ammonium transport protein [Oryza sativa
Japonica Group]
gi|50428739|gb|AAT77090.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108710844|gb|ABF98639.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549602|dbj|BAF13045.1| Os03g0725800 [Oryza sativa Japonica Group]
gi|215767830|dbj|BAH00059.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 359
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
+A R+RRE++S+R L ++VPG KMD AS+L +A Y+K L+ QVK LE ++P
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRP 241
>gi|125545578|gb|EAY91717.1| hypothetical protein OsI_13359 [Oryza sativa Indica Group]
Length = 359
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
+A R+RRE++S+R L ++VPG KMD AS+L +A Y+K L+ QVK LE ++P
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRP 241
>gi|222625712|gb|EEE59844.1| hypothetical protein OsJ_12417 [Oryza sativa Japonica Group]
Length = 201
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
+A R+RRE++S+R L ++VPG KMD AS+L +A Y+K L+ QVK LE ++P
Sbjct: 26 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRP 83
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISERIR LQ LVP K +TA MLD A +Y+K L+ QVK L +
Sbjct: 329 ATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLND 387
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISERIR LQ LVP K +TA MLD A +Y+K L+ QVK L +
Sbjct: 325 ATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLND 383
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
V+KP +VR +TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE N
Sbjct: 229 VQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 288
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 289 YVQSLQRQVEFL 300
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 8/77 (10%)
Query: 211 LEVVEKPKRKNVRISTDPQTVAA-------RQRRERISERIRVLQRLVPGGSKMDTASML 263
++ +KP R+ST ++ AA R+RR+RI+E++R LQ L+P +K D ASML
Sbjct: 576 VDTKQKPATTG-RVSTTKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASML 634
Query: 264 DEAANYLKFLRSQVKAL 280
DEA YLK L+ Q++ +
Sbjct: 635 DEAIEYLKMLQLQLQMM 651
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 462 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMM 511
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 7/78 (8%)
Query: 210 GLEVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASM 262
G EV +P + + + +TD ++A R RRE+ISER+++LQ LVPG SK+ A M
Sbjct: 225 GKEVAAEPSKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVM 284
Query: 263 LDEAANYLKFLRSQVKAL 280
LDE NY++ L+ QV+ L
Sbjct: 285 LDEIINYVQSLQRQVEFL 302
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 19/110 (17%)
Query: 214 VEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEA 266
+E PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K + AS+LDE
Sbjct: 49 LEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEI 108
Query: 267 ANYLKFLRSQVKALE----------NPGHQK--PDHHHSMNYPPTNLAFS 304
NY++ L+ QV+ L N G + P + Y NLAF
Sbjct: 109 INYIQALQRQVEFLSMKLEAVNSRTNSGIEGFPPKDFGAQAYDAPNLAFG 158
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
V+KP +VR +TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE N
Sbjct: 248 VQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 307
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 308 YVQSLQRQVEFL 319
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 442 LSERKRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 491
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISERIR LQ LVP K +TA MLD A +Y+K L+ QVK L
Sbjct: 76 ATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGL 132
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 378 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 427
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 464 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 513
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAA 267
E PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +KM A +LDE
Sbjct: 110 EPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEII 169
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 170 NYIQSLQHQVEFL 182
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 333 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 382
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQRLVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 179 ATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 235
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 377
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 377
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 377
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 377
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 469 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 518
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R LQ LVPG K+ A MLDE NY++ L+ QV+ L
Sbjct: 168 ATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFL 224
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 377
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+R LQ LVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 143 ATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFL 199
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 454 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 503
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 171 ATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFL 227
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 475 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMM 524
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 469 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 518
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
V+KP +VR +TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE N
Sbjct: 226 VQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 285
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 286 YVQSLQRQVEFL 297
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RIS+RIR LQ LVP K +TA ML+EA Y+KFL+ Q++ L
Sbjct: 190 ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQKQIQEL 246
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 472 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 521
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+++LQ LVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 181 ATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQVEFL 237
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+RVLQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 116 ATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 172
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R LQ LVPG K+ A MLDE NY++ L+ QV+ L
Sbjct: 157 ATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFL 213
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 171 ATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFL 227
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQRLVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 187 ATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 243
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 19/103 (18%)
Query: 212 EVVEKPK-----RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDE 265
++VE PK R +TD ++A R RRERIS+R++VLQ LVPG +K + A MLDE
Sbjct: 182 KLVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDE 241
Query: 266 AANYLKFLRSQVKALENPGHQKPDHHHSMNYPPTN-LAFSSLP 307
NY++ L+ QV+ L SM N L FS+LP
Sbjct: 242 IINYVQSLQRQVEFL------------SMKLATVNPLDFSNLP 272
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E+++ LQ+LVP SK D ASMLDE YLK L++QV+ +
Sbjct: 271 RRRRDRINEKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQFM 317
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 215 EKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANY 269
EKP +VR +TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY
Sbjct: 178 EKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINY 237
Query: 270 LKFLRSQVKAL 280
++ L+ QV+ L
Sbjct: 238 VQSLQRQVEFL 248
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPG-GSKMDTASMLDEAANYLKFLRSQVKALE 281
+T P+++A R RR +ISER+R LQ LVP ++ +TA MLD A Y+K L+ QVKALE
Sbjct: 311 ATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALE 368
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 16/112 (14%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL---------E 281
++ R+RR+RI+ER++ LQ L+P +K D ASMLDEA Y+K L+ Q++ +
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMM 279
Query: 282 NPGHQKPDHHHSMNY-------PPTNLAFSSLPFNNNSFPVQTHFSLQNPNH 326
PG Q+ H +M PP+ + F ++ P QTH + P +
Sbjct: 280 YPGMQQYMPHMAMGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQY 331
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRERISER+R+LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 241 ATNSHSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 297
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQV 277
R +T P+++A R RR RISERIR LQ LVP K +TA MLD A +Y+K L+ QV
Sbjct: 320 RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQV 379
Query: 278 KALEN 282
K L +
Sbjct: 380 KVLND 384
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 16/112 (14%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL---------E 281
++ R+RR+RI+ER++ LQ L+P +K D ASMLDEA Y+K L+ Q++ +
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMM 279
Query: 282 NPGHQKPDHHHSMNY-------PPTNLAFSSLPFNNNSFPVQTHFSLQNPNH 326
PG Q+ H +M PP+ + F ++ P QTH + P +
Sbjct: 280 YPGMQQYMPHMAMGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQY 331
>gi|414864593|tpg|DAA43150.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 290
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 229 QTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
Q AARQRR+RISE+ L RL+PG +K++TA ML+EA+ ++K L++QV L
Sbjct: 159 QNSAARQRRKRISEKTAELARLIPGANKLNTAEMLEEASRHVKLLQAQVGML 210
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 160 ATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 216
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
++ R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ Q++ L +PG K
Sbjct: 27 LSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVL-SPGSSK 82
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
V+KP +VR +TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE N
Sbjct: 137 VQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 196
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 197 YVQSLQRQVEFL 208
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
E PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K + AS+LDE
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 178
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 179 NYIQSLQHQVEFL 191
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 65/130 (50%), Gaps = 26/130 (20%)
Query: 214 VEKPK-----RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
VE PK R +TD ++A R RRERIS+R++VLQ LVPG +K + A MLDE
Sbjct: 195 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 268 NYLKFLRSQVKALENPGHQKPDHHHSMNYPPTN-LAFSSLP-------FNNNSFPVQTHF 319
NY++ L+ QV+ L SM N L FS+LP F + F
Sbjct: 255 NYVQSLQRQVEFL------------SMKLATVNPLDFSNLPTLLQKDMFQACGPSASSVF 302
Query: 320 SLQNPNHIHR 329
SL++ N R
Sbjct: 303 SLESSNSAFR 312
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 184 EEPDPEAIAHMKEMIYRAAAFRPVNLGLEV---VEKPKRKNVRISTDPQTVAARQRRERI 240
++P A+AH + +A + L++ V R +T P+++A R RR +I
Sbjct: 300 QQPSSSALAHQLSLPNTSAEMAAIEKFLQLSDSVPCKIRAKRGCATHPRSIAERVRRTKI 359
Query: 241 SERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
SER+R LQ LVP K +TA MLD A Y+K L++QV+AL +
Sbjct: 360 SERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQVEALSD 402
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQRLVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 155 ATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 211
>gi|356574284|ref|XP_003555279.1| PREDICTED: transcription factor bHLH113-like [Glycine max]
Length = 277
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK-PDHH 291
A+QR+E++ ERI LQ+LV SK DTAS+L EA Y++FL QV+ L +P Q P +
Sbjct: 151 AKQRKEKLGERIAALQQLVSPFSKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQSLPSSY 210
Query: 292 H 292
H
Sbjct: 211 H 211
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQV 277
R +T P+++A R RR RISERIR LQ LVP K +TA MLD A +Y+K L+ QV
Sbjct: 319 RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQV 378
Query: 278 KAL 280
K L
Sbjct: 379 KVL 381
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAA 267
E PK + + +T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE
Sbjct: 233 EAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 292
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 293 NYVQSLQQQVEFL 305
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
++ R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ Q++ L +PG K
Sbjct: 27 LSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVL-SPGSSK 82
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 16/112 (14%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL---------E 281
++ R+RR+RI+ER++ LQ L+P +K D ASMLDEA Y+K L+ Q++ +
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMM 350
Query: 282 NPGHQKPDHHHSMNY-------PPTNLAFSSLPFNNNSFPVQTHFSLQNPNH 326
PG Q+ H +M PP+ + F ++ P QTH + P +
Sbjct: 351 YPGMQQYMPHMAMGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQY 402
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALENP 283
+T P+++A R RR RIS+RIR LQ +VP K +TA ML+EA Y+KFL+ Q++ L
Sbjct: 175 ATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTE- 233
Query: 284 GHQK 287
HQ+
Sbjct: 234 -HQR 236
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 359 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 408
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 322 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 368
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 215 EKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANY 269
+KP+ +VR +TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY
Sbjct: 204 QKPEYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINY 263
Query: 270 LKFLRSQVKAL 280
++ L+ QV+ L
Sbjct: 264 VQSLQRQVEFL 274
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALENP 283
+T P+++A R RR RIS+RIR LQ LVP K +TA ML+EA Y+KFL+ +++ L
Sbjct: 112 ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELSE- 170
Query: 284 GHQK 287
HQK
Sbjct: 171 -HQK 173
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+++++ LQ+LVP SK D ASMLDE YLK L++QV+ +
Sbjct: 233 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 279
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISERIR LQ LVP K +TA MLD A +Y+K L+ QVK L +
Sbjct: 304 ATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVLND 362
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAA 267
E PK + + +T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE
Sbjct: 256 EAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 315
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 316 NYVQSLQQQVEFL 328
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 171 ATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFL 227
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAA 267
E PK + + +T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE
Sbjct: 260 EAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 319
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 320 NYVQSLQQQVEFL 332
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 16/112 (14%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL---------E 281
++ R+RR+RI+ER++ LQ L+P +K D ASMLDEA Y+K L+ Q++ +
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMM 350
Query: 282 NPGHQKPDHHHSMNY-------PPTNLAFSSLPFNNNSFPVQTHFSLQNPNH 326
PG Q+ H +M PP+ + F ++ P QTH + P +
Sbjct: 351 YPGMQQYMPHMAMGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQY 402
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 348 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 397
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 214 VEKPK-----RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
VE PK R +TD ++A R RRERIS+R++VLQ LVPG +K + A MLDE
Sbjct: 195 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 268 NYLKFLRSQVKALENPGHQKPDHHHSMNYPPTN-LAFSSLP 307
NY++ L+ QV+ L SM N L FS+LP
Sbjct: 255 NYVQSLQRQVEFL------------SMKLATVNPLDFSNLP 283
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAA 267
E PK + + +T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE
Sbjct: 254 EAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 313
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 314 NYVQSLQQQVEFL 326
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 394 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 440
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALENP 283
+T P+++A R RR RIS+RIR LQ LVP K +TA ML+EA Y+KFL+ +++ L
Sbjct: 182 ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELSE- 240
Query: 284 GHQK 287
HQK
Sbjct: 241 -HQK 243
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
E PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K + AS+LDE
Sbjct: 103 EPPKQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEII 162
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 163 NYIQALQRQVEFL 175
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 214 VEKPK-----RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
VE PK R +TD ++A R RRERIS+R++VLQ LVPG +K + A MLDE
Sbjct: 195 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 268 NYLKFLRSQVKALENPGHQKPDHHHSMNYPPTN-LAFSSLP 307
NY++ L+ QV+ L SM N L FS+LP
Sbjct: 255 NYVQSLQRQVEFL------------SMKLATVNPLDFSNLP 283
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 412 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 461
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 394 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 440
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 169 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 218
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 202 AAFRPVNLGLEVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGS 255
A + LG + + PK + + + +T+ ++A R RRE+ISER++ LQ LVPG S
Sbjct: 336 ACGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCS 395
Query: 256 KM-DTASMLDEAANYLKFLRSQVKAL 280
K+ A MLDE NY++ L+ QV+ L
Sbjct: 396 KVTGKAVMLDEIINYVQSLQRQVEFL 421
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-------MDTASMLDEAANYLKFLRSQV 277
+T P+++A R RR RISER+R LQ LVP K +T+ MLDEA Y+KFL+ QV
Sbjct: 423 ATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYMKFLQKQV 482
Query: 278 KALE 281
L+
Sbjct: 483 DDLQ 486
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK--MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISER+R LQ LVP K ++ A MLDEA Y+K L+ QV+ L
Sbjct: 475 ATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQKQVQEL 532
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+RVLQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 118 ATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 174
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+RVLQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 118 ATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 174
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR++I++R++ LQ+LVP SK D ASMLDE YLK L++QV+ +
Sbjct: 293 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 339
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR++I++R+++LQ+LVP SK D ASMLDE YLK L++QV +
Sbjct: 225 RKRRDKINQRMKILQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 271
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 192 AHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQ--TVAARQRRERISERIRVLQR 249
AH+KEM P E E PK + + PQ +++ R+RR++I++++R LQ
Sbjct: 352 AHLKEMA------SPSENADEEEEIPKSTSTKKKRIPQVHSLSERKRRDKINKKMRALQA 405
Query: 250 LVPGGSKMDTASMLDEAANYLKFLRSQVKALENPG 284
L+P K+D ASMLD+A YLK L+ Q++ + G
Sbjct: 406 LIPNSDKVDKASMLDKAIEYLKTLQLQLQMMSMRG 440
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPG------ 284
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 191 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMKSGINLAP 250
Query: 285 HQKPDHHHSMNYPPTNLAFSSLPFNNNSFPVQTHFSL 321
P SM P + F++ N + P+ L
Sbjct: 251 MCMPGQLQSMQLPQICMGFTT---ENGTLPITMGMGL 284
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+++++ LQ+LVP SK D ASMLDE YLK L++QV+ +
Sbjct: 195 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 241
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K D ASMLDEA +YLK L+ Q++ +
Sbjct: 744 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQMM 790
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 459 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 508
>gi|242038015|ref|XP_002466402.1| hypothetical protein SORBIDRAFT_01g007160 [Sorghum bicolor]
gi|241920256|gb|EER93400.1| hypothetical protein SORBIDRAFT_01g007160 [Sorghum bicolor]
Length = 292
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 50/56 (89%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+++LQ+LVP G+K+D ++ML+EA +Y++FL+ Q+K L
Sbjct: 210 ATDPQSLYARRRRERINERLKILQKLVPNGTKVDISTMLEEAVHYVRFLQQQIKML 265
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 188 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 237
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 171 ATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 227
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+R LQ LVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 144 ATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQVEFL 200
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 447 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 496
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAA 267
E PK + + +T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE
Sbjct: 231 EAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEII 290
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 291 NYVQSLQQQVEFL 303
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDH 290
++ R+RR+RI+E++R LQ L+P K D ASMLDEA YLK L+ Q++ + G P
Sbjct: 193 LSERRRRDRINEKMRALQELIPHCYKTDKASMLDEAIEYLKSLQLQLQVMWMGGGMAP-- 250
Query: 291 HHSMNYPPTNLAFSSLPFNNNSFPVQTHFSLQNPNHIHR 329
M +P S + P S+QNP H+ R
Sbjct: 251 ---MLFPGVQHFMSRMGM-GPPLP-----SMQNPMHLPR 280
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
E PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K + AS+LDE
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 178
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ +
Sbjct: 179 NYIQSLQHQVEFM 191
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+RVLQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 118 ATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFL 174
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
Query: 210 GLE--VVEKPKRKNVRIST------DPQTVAARQRRERISERIRVLQRLVPGGSKMDTAS 261
GLE V E P + N R S+ + ++ ++RR RI+E+++ LQ L+P +K D AS
Sbjct: 152 GLEALVEELPTKPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS 211
Query: 262 MLDEAANYLKFLRSQVKAL 280
MLDEA YLK L+ QV+ L
Sbjct: 212 MLDEAIEYLKQLQLQVQML 230
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAA 267
E+PK K + + +T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE
Sbjct: 39 EEPKEKYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEII 98
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 99 NYIQSLQQQVEFL 111
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+RVLQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 128 ATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFL 184
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQV 277
R +T P+++A R RR +ISERIR LQ LVP K +T+ MLD A +Y+K L+ QV
Sbjct: 298 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQV 357
Query: 278 KAL 280
KAL
Sbjct: 358 KAL 360
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+RVLQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 127 ATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFL 183
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQV 277
R +T P+++A R RR +ISERIR LQ LVP K +T+ MLD A +Y+K L+ QV
Sbjct: 298 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQV 357
Query: 278 KAL 280
KAL
Sbjct: 358 KAL 360
>gi|358248228|ref|NP_001239843.1| transcription factor bHLH25-like [Glycine max]
gi|3399777|gb|AAC32828.1| symbiotic ammonium transporter [Glycine max]
Length = 347
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 214 VEKPKRKNVRISTDPQ-------TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEA 266
+ K ++ +I T P+ +A R+RRE++S+R L LVPG KMD AS+L EA
Sbjct: 151 IFKASQETKKIKTRPKLSQPQDHIIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEA 210
Query: 267 ANYLKFLRSQVKALENPGHQK 287
YLK ++ +V ALE ++K
Sbjct: 211 IKYLKQMQEKVSALEEEQNRK 231
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + AS+LDE NY++ L+ QV+ L
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 199
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 7/74 (9%)
Query: 214 VEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEA 266
E PK + + +T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE
Sbjct: 222 AEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 281
Query: 267 ANYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 282 INYVQSLQQQVEFL 295
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR +ISERIR LQ LVP K +T+ MLD A +Y+K L+ QVKAL
Sbjct: 324 ATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKAL 380
>gi|357166163|ref|XP_003580620.1| PREDICTED: uncharacterized protein LOC100837038 [Brachypodium
distachyon]
Length = 466
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+P K R+ T + R+E++ +RI LQ+LV K DTAS+L E Y+KFL
Sbjct: 331 EPAFKKPRMETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYVKFLHD 390
Query: 276 QVKALENPGHQKPDHHH 292
QV L P + +HHH
Sbjct: 391 QVGVLSAPYLKNGNHHH 407
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISER+R LQ LVP K +T+ MLD A +Y+K L+ QVK L +
Sbjct: 226 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKTLSD 284
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASM-LDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R+LQ LVPG K+ +M LDE NY++ L++QV+ L
Sbjct: 138 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQVEFL 194
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 22/129 (17%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
E+PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE
Sbjct: 38 EQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 97
Query: 268 NYLKFLRSQVKALE----------NPGHQ--KPDHHHSMNYPPTNLAFSSLP---FNNNS 312
NY++ L+ QV+ L PG + P + + T +AF S ++ S
Sbjct: 98 NYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKDYGQQTFDTTGVAFGSQATREYSRGS 157
Query: 313 FPVQTHFSL 321
P H +
Sbjct: 158 SPEWLHMQI 166
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 14/114 (12%)
Query: 180 SSSIEEPDP-----EAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAA- 233
SSS EEP+P E K + ++ ++ E E +KN+ S+ ++ AA
Sbjct: 204 SSSSEEPEPVGKVAEQDRKRKGIEAEEWEYQSEDVDFESAEA--KKNISGSSTKRSRAAE 261
Query: 234 ------RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
R+RR+RI+E+++ LQ L+P +K D ASMLDEA +YLK L+ QV+ ++
Sbjct: 262 VHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQRVQ 315
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + AS+LDE NY++ L+ QV+ L
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 199
>gi|357117240|ref|XP_003560380.1| PREDICTED: transcription factor bHLH25-like [Brachypodium
distachyon]
Length = 349
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
+A R+RRE++SER L ++VPG KMD AS+L +A Y+K L+ QVK +E
Sbjct: 170 LAERKRREKLSERFIALSKIVPGLKKMDKASVLGDAIKYVKTLQDQVKGME 220
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQV 277
+T P+++A R RR RISER+R LQ LVP K +T+ MLDEA Y+KFL+ QV
Sbjct: 32 ATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQKQV 85
>gi|255576033|ref|XP_002528912.1| DNA binding protein, putative [Ricinus communis]
gi|223531666|gb|EEF33492.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
+A R+RRE++S+R L +VPG KMD AS+L +A YLK L+ +VK LE +K
Sbjct: 180 VIAERKRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKHLQERVKTLEEQAAKK 237
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP----GHQ 286
+A R+RRE+I+E+++ LQ+L+P +K S LD+A Y+K L+SQ++ + +P G+
Sbjct: 262 LAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGMMSPMMNAGNT 321
Query: 287 K---PDHHHSMNYPPTNLAFSSLPFNNNSFPVQTHFSLQNPNH 326
+ P MN PP +PF SFP+ + P++
Sbjct: 322 QQFMPHMAMDMNRPP-----PFIPFPGTSFPMPAQMAGVGPSY 359
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + AS+LDE NY++ L+ QV+ L
Sbjct: 102 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 158
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + AS+LDE NY++ L+ QV+ L
Sbjct: 141 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 197
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
Query: 210 GLE--VVEKPKRKNVRIST------DPQTVAARQRRERISERIRVLQRLVPGGSKMDTAS 261
GLE V E P + N R S+ + ++ ++RR RI+E+++ LQ L+P +K D AS
Sbjct: 152 GLEALVEELPTKPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS 211
Query: 262 MLDEAANYLKFLRSQVKAL 280
MLDEA YLK L+ QV+ L
Sbjct: 212 MLDEAIEYLKQLQLQVQML 230
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RIS+RIR LQ LVP K +TA ML+EA Y+K L+SQ++ L
Sbjct: 188 ATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQEL 244
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 14/113 (12%)
Query: 180 SSSIEEPDP-----EAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAA- 233
SSS EEP+P E K + ++ ++ E E +KN+ S+ ++ AA
Sbjct: 204 SSSSEEPEPVGKVAEQDRKRKGIEAEEWEYQSEDVDFESAEA--KKNISGSSTKRSRAAE 261
Query: 234 ------RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E+++ LQ L+P +K D ASMLDEA +YLK L+ QV+ +
Sbjct: 262 VHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQMM 314
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 298 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 354
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAA 267
+ PK + + + +T+ ++A R RRE+ISER+R+LQ LVPG SK+ A MLDE
Sbjct: 332 DAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEII 391
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 392 NYVQSLQRQVEFL 404
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG K+ A MLDE NY++ L+ Q++ L
Sbjct: 179 ATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER+R+LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 348 ATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 404
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 202 AAFRPVNLGLEVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGS 255
A+ + LG + + PK + + + +T+ ++A R RRE+ISER++ LQ LVPG S
Sbjct: 199 ASGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCS 258
Query: 256 KM-DTASMLDEAANYLKFLRSQVKAL 280
K+ A MLDE NY++ L+ QV+ L
Sbjct: 259 KVTGKAVMLDEIINYVQSLQRQVEFL 284
>gi|21536756|gb|AAM61088.1| unknown [Arabidopsis thaliana]
Length = 270
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
KP +K R A+ R+ER+ ERI LQ+LV K D AS+L EA Y+KFL+
Sbjct: 136 KPGKKGKRNQDKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQD 195
Query: 276 QVKALENP 283
Q++ L +P
Sbjct: 196 QIQVLCSP 203
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR++I++R++ LQ+LVP SK D ASMLDE YLK L++QV +
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
Query: 144 KLISENPPKAKKPRLDKRPSSANINFQLQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAA 203
K+++EN K K+ ++D +NI ++ +N + + S ++ KE
Sbjct: 104 KIVAENDSKDKRIKVDSEDGESNITGKISIKDNKTATKSKNRGTCANSSNSKEN------ 157
Query: 204 FRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASM 262
+ L+ + R+ +TD ++A R RRE+ISER++ LQ LVPG +K+ A M
Sbjct: 158 ---EDQKLDYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 212
Query: 263 LDEAANYLKFLRSQVKAL 280
LDE NY++ L+ QV+ L
Sbjct: 213 LDEIINYVQSLQRQVEFL 230
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR++I++R++ LQ+LVP SK D ASMLDE YLK L++QV +
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>gi|18402256|ref|NP_566639.1| transcription factor bHLH113 [Arabidopsis thaliana]
gi|75311549|sp|Q9LT67.1|BH113_ARATH RecName: Full=Transcription factor bHLH113; AltName: Full=Basic
helix-loop-helix protein 113; Short=AtbHLH113;
Short=bHLH 113; AltName: Full=Transcription factor EN
61; AltName: Full=bHLH transcription factor bHLH113
gi|11994473|dbj|BAB02475.1| unnamed protein product [Arabidopsis thaliana]
gi|332642727|gb|AEE76248.1| transcription factor bHLH113 [Arabidopsis thaliana]
Length = 270
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
KP +K R A+ R+ER+ ERI LQ+LV K D AS+L EA Y+KFL+
Sbjct: 136 KPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQD 195
Query: 276 QVKALENP 283
Q++ L +P
Sbjct: 196 QIQVLCSP 203
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 198 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFL 254
>gi|357452535|ref|XP_003596544.1| Transcription factor bHLH123 [Medicago truncatula]
gi|355485592|gb|AES66795.1| Transcription factor bHLH123 [Medicago truncatula]
Length = 437
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 154 KKPRLDKR--PSSANINFQLQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAA--FRPVNL 209
K P+ R P N QL +NN+ ++ E P+ ++ ++ + + F P N
Sbjct: 233 KVPQFFMRTSPPKQPTNNQLHFTNNTPFWNASEAPN--SVKDVRSTFFPSLQPQFSPSNF 290
Query: 210 G--------LEVVEK----PKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKM 257
+ VV+K P K R T A + R+E++ +RI LQ+LV K
Sbjct: 291 DSHSKNISEVSVVKKSGSEPAPKRTRNETPSTLPAFKVRKEKMGDRITALQQLVSPFGKT 350
Query: 258 DTASMLDEAANYLKFLRSQVKALENP 283
DTAS+L EA Y+KFL QV L P
Sbjct: 351 DTASVLSEAIEYIKFLHEQVTVLSTP 376
>gi|255554513|ref|XP_002518295.1| DNA binding protein, putative [Ricinus communis]
gi|223542515|gb|EEF44055.1| DNA binding protein, putative [Ricinus communis]
Length = 309
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 221 NVRIS-TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
N RIS + +A R+RRE++S+R L +VPG KMD AS+L +A YLK L+ +VK
Sbjct: 123 NGRISQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKT 182
Query: 280 LENPGHQK 287
LE +K
Sbjct: 183 LEEQTKKK 190
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG K+ A MLDE NY++ L+ Q++ L
Sbjct: 176 ATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 232
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG K+ A MLDE NY++ L+ Q++ L
Sbjct: 179 ATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 184 EEPDPEAIAHMKEMIYRAAAFRPVNLGLEV---VEKPKRKNVRISTDPQTVAARQRRERI 240
++P A+AH + +A + L++ V R +T P+++A R RR +I
Sbjct: 303 QQPSSSALAHQLSLPNTSAEMAAIEKFLQLSDSVPCKIRAKRGCATHPRSIAERVRRTKI 362
Query: 241 SERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
SER+R LQ LVP K +TA MLD A Y+K L++QV+ L +
Sbjct: 363 SERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQVQTLSD 405
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG K+ A MLDE NY++ L+ Q++ L
Sbjct: 179 ATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG K+ A MLDE NY++ L+ Q++ L
Sbjct: 179 ATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 118 ATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFL 174
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 198 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFL 254
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R+LQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 114 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 170
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQV 277
R +T P+++A R RR +ISERIR LQ LVP K +T+ MLD A +Y+K L+ QV
Sbjct: 195 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQV 254
Query: 278 KAL 280
KAL
Sbjct: 255 KAL 257
>gi|356534305|ref|XP_003535697.1| PREDICTED: transcription factor bHLH113-like [Glycine max]
Length = 282
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK-PDHH 291
A+QR+E++ ERI LQ+LV K DTAS+L EA Y++FL QV+ L +P Q P +
Sbjct: 156 AKQRKEKLGERIATLQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQSLPSSY 215
Query: 292 H 292
H
Sbjct: 216 H 216
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 11/81 (13%)
Query: 215 EKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANY 269
+KP +VR +TD ++A R RRE+ISER++ LQ L+PG +K+ A MLDE NY
Sbjct: 185 QKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINY 244
Query: 270 LKFLRSQVKALE------NPG 284
++ L+ QV+ L NPG
Sbjct: 245 VQSLQRQVEFLSMKLAAVNPG 265
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK----PD 289
R+RR+RI+E++R LQ+L+P +K D ASML+EA YLK L+ Q++ + G P
Sbjct: 370 RRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVMWMGGGMTPVMFPG 429
Query: 290 HHHSMNYPPTNLAFSSLP 307
H M+ + SLP
Sbjct: 430 IQHYMSQMGMGMGAPSLP 447
>gi|357512987|ref|XP_003626782.1| Transcription factor bHLH25 [Medicago truncatula]
gi|355520804|gb|AET01258.1| Transcription factor bHLH25 [Medicago truncatula]
Length = 332
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 178 SVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQ--TVAARQ 235
S +SI +P P + M+ + + L K + KN+R S++ Q +A R+
Sbjct: 91 SFENSIMKPSPNSATFSSIMVPKTTLNNNIVSELPKTIKKRTKNLRSSSEIQDHIMAERK 150
Query: 236 RRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPD 289
RR+ +SER L +PG K D A +L+EA NY+K L+ +V LEN +K D
Sbjct: 151 RRQVLSERFIALSATIPGLKKTDKAYILEEAINYVKQLQERVNELENHTKRKRD 204
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 88 ATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFL 144
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R+LQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 130 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 186
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKALE-- 281
+TD ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 448 ATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVENLSMK 507
Query: 282 ----NPG 284
NPG
Sbjct: 508 LASVNPG 514
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPG-GSKMDTASMLDEAANYLKFLRSQVKALE 281
+T P+++A R RR +ISER+R LQ LVP ++ +TA MLD A Y+K L+ QVK LE
Sbjct: 310 ATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKTLE 367
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 215 EKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANY 269
EKP +VR +TD ++A R RRE+ISER+ LQ LVPG +K+ A MLDE NY
Sbjct: 187 EKPDYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINY 246
Query: 270 LKFLRSQVKAL 280
++ L+ QV+ L
Sbjct: 247 VQSLQRQVEFL 257
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 357 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 413
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 129 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQVEFL 185
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 100 ATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQVEFL 156
>gi|225434106|ref|XP_002273925.1| PREDICTED: transcription factor bHLH113 [Vitis vinifera]
gi|147799457|emb|CAN65949.1| hypothetical protein VITISV_012226 [Vitis vinifera]
gi|296084284|emb|CBI24672.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQ 286
T++ ++R+E++ ERI LQ+LV K DTAS+L EA Y++FL+ QVK L P Q
Sbjct: 29 TISTKERKEKVGERIAALQQLVSPFGKTDTASVLLEAMEYIRFLQEQVKVLSAPYLQ 85
>gi|356549469|ref|XP_003543116.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 348
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
+A R+RRE++S+R L LVPG KMD AS+L EA YLK ++ +V ALE ++K
Sbjct: 175 IAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQNRK 231
>gi|17027282|gb|AAL34136.1|AC090713_23 putative transcription factor [Oryza sativa Japonica Group]
gi|108711234|gb|ABF99029.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125588017|gb|EAZ28681.1| hypothetical protein OsJ_12693 [Oryza sativa Japonica Group]
Length = 310
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
Query: 217 PKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQ 276
P R+ R +T Q++ AR+RRERI+ R+R+LQ+LVP G+K+D ++ML+EA +Y+KFL+ Q
Sbjct: 211 PARR--RSATIAQSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQ 268
Query: 277 VKA 279
+K
Sbjct: 269 IKV 271
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R+LQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 132 ATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEFL 188
>gi|45735905|dbj|BAD12937.1| bHLH transcription factor (bHLH123)-like protein [Oryza sativa
Japonica Group]
Length = 418
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 228 PQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP 283
P ++AA+ R+E++ +R+ LQ+LV K DTAS+L E Y+KFL QV AL P
Sbjct: 294 PASLAAKVRKEKLGDRVTALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAP 349
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 285 ATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFL 341
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R+RR++I++R++ LQ+LVP SK D ASMLDE YLK L++QV+
Sbjct: 292 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 336
>gi|359475553|ref|XP_002268443.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
gi|147839680|emb|CAN75020.1| hypothetical protein VITISV_039940 [Vitis vinifera]
Length = 331
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 226 TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGH 285
T +A R+RRE++S+R L +VPG KMD AS+L +A YLK L+ +VK LE
Sbjct: 155 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTR 214
Query: 286 QK 287
+K
Sbjct: 215 KK 216
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 346 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 402
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 379 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 435
>gi|297736346|emb|CBI25069.3| unnamed protein product [Vitis vinifera]
Length = 344
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 226 TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGH 285
T +A R+RRE++S+R L +VPG KMD AS+L +A YLK L+ +VK LE
Sbjct: 168 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTR 227
Query: 286 QK 287
+K
Sbjct: 228 KK 229
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQV 277
R +T P+++A R RR +ISERIR LQ LVP K +TA MLD A +Y+K L+ QV
Sbjct: 326 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQV 385
Query: 278 KAL 280
K L
Sbjct: 386 KVL 388
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAANYLKFLRSQVK 278
+TD ++A R RRE+ISER++ LQ LVPG K+ A MLDE NY++FL+ QV+
Sbjct: 13 ATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQVE 67
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+ER++ LQ L+P +K D ASMLDEA YLK L+ Q++ +
Sbjct: 15 LSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQVV 64
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P SK D ASMLDEA YLK L+ QV+ L
Sbjct: 145 LSEKRRRSRINEKMKALQNLIPNSSKTDKASMLDEAIEYLKLLQLQVQGL 194
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 213 VVEKPKRKN--VRISTDPQT--VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAAN 268
V EKP R+ V+ S + Q + R+RR++I++R+R+L+ L+P +K D ASMLD+A
Sbjct: 736 VKEKPAREGTGVKRSRNAQVHNLCERKRRDKINKRMRILKELIPNCNKTDKASMLDDAIE 795
Query: 269 YLKFLRSQVKA 279
YLK L+ Q++
Sbjct: 796 YLKTLKLQIQV 806
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISERIR LQ LVP K TA MLD A +Y+K L+ Q K L +
Sbjct: 309 FATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQFKTLSD 368
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 216 KPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAAN 268
+P R V + +TD ++A R RRERIS+R++VLQ LVPG +K + A MLDE N
Sbjct: 186 EPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 245
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 246 YVQSLQRQVEFL 257
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 216 KPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYL 270
KP +VR +TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY+
Sbjct: 137 KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYV 196
Query: 271 KFLRSQVKAL 280
+ L+ QV+ L
Sbjct: 197 QSLQRQVEFL 206
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
E+PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE
Sbjct: 162 EQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 221
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 222 NYIQSLQRQVEFL 234
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R+LQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 129 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 185
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++VLQ +VPG +K + AS+LDE NY++ L+ QV+ L
Sbjct: 130 ATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFL 186
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 393 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 449
>gi|255555107|ref|XP_002518591.1| transcription factor, putative [Ricinus communis]
gi|223542436|gb|EEF43978.1| transcription factor, putative [Ricinus communis]
Length = 494
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 213 VVEK---PKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANY 269
VV+K P K RI T + R+E++ +RI LQ+LV K DTAS+L EA Y
Sbjct: 361 VVKKGSEPAIKRARIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEY 420
Query: 270 LKFLRSQVKALENP 283
+KFL QV L P
Sbjct: 421 IKFLHDQVSVLSTP 434
>gi|218193803|gb|EEC76230.1| hypothetical protein OsI_13645 [Oryza sativa Indica Group]
Length = 291
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
Query: 217 PKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQ 276
P R+ R +T Q++ AR+RRERI+ R+R+LQ+LVP G+K+D ++ML+EA +Y+KFL+ Q
Sbjct: 192 PARR--RSATIAQSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQ 249
Query: 277 VKA 279
+K
Sbjct: 250 IKV 252
>gi|125544694|gb|EAY90833.1| hypothetical protein OsI_12438 [Oryza sativa Indica Group]
Length = 263
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R + P+ +++ER+ + +R L+ ++PGG +MDT ++LDEA YLK L+ +VK
Sbjct: 195 RSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVK 254
Query: 279 AL 280
L
Sbjct: 255 KL 256
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 13 ATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEFL 69
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 297 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVEFL 353
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 7/74 (9%)
Query: 214 VEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEA 266
E PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE
Sbjct: 129 CEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 188
Query: 267 ANYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 189 INYIQSLQRQVEFL 202
>gi|15232315|ref|NP_188700.1| transcription factor bHLH123 [Arabidopsis thaliana]
gi|75299591|sp|Q8GXT3.1|BH123_ARATH RecName: Full=Transcription factor bHLH123; AltName: Full=Basic
helix-loop-helix protein 123; Short=AtbHLH123;
Short=bHLH 123; AltName: Full=Transcription factor EN
63; AltName: Full=bHLH transcription factor bHLH123
gi|26451163|dbj|BAC42685.1| putative bHLH transcription factor bHLH123 [Arabidopsis thaliana]
gi|30793909|gb|AAP40407.1| unknown protein [Arabidopsis thaliana]
gi|332642885|gb|AEE76406.1| transcription factor bHLH123 [Arabidopsis thaliana]
Length = 454
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP--------G 284
A +R+E++ +RI LQ+LV K D AS+L EA Y+KFL QV AL NP
Sbjct: 343 AFKRKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQ 402
Query: 285 HQKPDH 290
HQ+ DH
Sbjct: 403 HQQSDH 408
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 215 EKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANY 269
+KP +VR +TD ++A R RRE+ISER++ LQ L+PG +K+ A MLDE NY
Sbjct: 185 QKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINY 244
Query: 270 LKFLRSQVKAL 280
++ L+ QV+ L
Sbjct: 245 VQSLQRQVEFL 255
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 265 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++VLQ +VPG +K + AS+LDE NY++ L+ QV+ L
Sbjct: 57 ATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFL 113
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 392 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 448
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+ER++ LQ L+P +K D ASMLDEA YLK L+ Q++ +
Sbjct: 15 LSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQVV 64
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 365 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 421
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 265 ATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFL 321
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 215 EKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANY 269
EKP +VR +TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY
Sbjct: 122 EKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINY 181
Query: 270 LKFLRSQVKAL 280
++ L+ QV+ L
Sbjct: 182 VQSLQRQVEFL 192
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+PKR + + ++ R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+
Sbjct: 12 RPKRSR---AAEVHNLSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQL 68
Query: 276 QVKA 279
Q++
Sbjct: 69 QLQV 72
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 37/45 (82%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R+RR+RI+++++ LQ+LVP SK D ASMLDE +YLK L++QV+
Sbjct: 285 RKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQ 329
>gi|108709600|gb|ABF97395.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125544695|gb|EAY90834.1| hypothetical protein OsI_12439 [Oryza sativa Indica Group]
gi|125586994|gb|EAZ27658.1| hypothetical protein OsJ_11606 [Oryza sativa Japonica Group]
gi|215678773|dbj|BAG95210.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 263
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R + P+ +++ER+ + +R L+ ++PGG +MDT ++LDEA YLK L+ +VK
Sbjct: 195 RSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVK 254
Query: 279 AL 280
L
Sbjct: 255 KL 256
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 265 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR +I+E+++ LQ+L+P +K D ASMLDEA YLK L+ QV+AL
Sbjct: 111 LSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQAL 160
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 216 KPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAAN 268
+P R V + +TD ++A R RRERIS+R++VLQ LVPG +K + A MLDE N
Sbjct: 186 EPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 245
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 246 YVQSLQRQVEFL 257
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Query: 212 EVVEKPKRKNVRISTDPQTVAA-------RQRRERISERIRVLQRLVPGGSKMDTASMLD 264
E E+ K + R + +T AA R+RR+RI+E++R LQ L+P +K D AS+LD
Sbjct: 212 EATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILD 271
Query: 265 EAANYLKFLRSQVKAL 280
EA YLK L+ QV+ +
Sbjct: 272 EAIEYLKSLQMQVQIM 287
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R+LQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 146 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 202
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 216 KPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAAN 268
+P R V + +TD ++A R RRERIS+R++VLQ LVPG +K + A MLDE N
Sbjct: 186 EPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 245
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 246 YVQSLQRQVEFL 257
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISER+R LQ L P K +TA MLD A Y+K L+ QVK L++
Sbjct: 356 FATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQVKTLKD 415
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Query: 212 EVVEKPKRKNVRISTDPQTVAA-------RQRRERISERIRVLQRLVPGGSKMDTASMLD 264
E E+ K + R + +T AA R+RR+RI+E++R LQ L+P +K D AS+LD
Sbjct: 201 EATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILD 260
Query: 265 EAANYLKFLRSQVKAL 280
EA YLK L+ QV+ +
Sbjct: 261 EAIEYLKSLQMQVQIM 276
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPG-GSKMDTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER+R+LQ LVPG K A MLDE NY++ L+ QV+ L
Sbjct: 238 ATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQQVEFL 294
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 411 ATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 467
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Query: 212 EVVEKPKRKNVRISTDPQTVAA-------RQRRERISERIRVLQRLVPGGSKMDTASMLD 264
E E+ K + R + +T AA R+RR+RI+E++R LQ L+P +K D AS+LD
Sbjct: 317 EATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILD 376
Query: 265 EAANYLKFLRSQVKAL 280
EA YLK L+ QV+ +
Sbjct: 377 EAIEYLKSLQMQVQIM 392
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 259 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 315
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISER+R LQ LVP K +TA MLD A +Y+K L+ Q K L +
Sbjct: 278 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQYKTLSD 336
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAA 267
E PK + + +T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE
Sbjct: 197 EAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 256
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 257 NYVQSLQQQVEFL 269
>gi|9294343|dbj|BAB02240.1| unnamed protein product [Arabidopsis thaliana]
Length = 516
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP--------G 284
A +R+E++ +RI LQ+LV K D AS+L EA Y+KFL QV AL NP
Sbjct: 405 AFKRKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQ 464
Query: 285 HQKPDH 290
HQ+ DH
Sbjct: 465 HQQSDH 470
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R+LQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 146 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 202
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAA 267
E PK + + +T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE
Sbjct: 195 EAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 254
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 255 NYVQSLQQQVEFL 267
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 265 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 170 ATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 226
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Query: 212 EVVEKPKRKNVRISTDPQTVAA-------RQRRERISERIRVLQRLVPGGSKMDTASMLD 264
E E+ K + R + +T AA R+RR+RI+E++R LQ L+P +K D AS+LD
Sbjct: 301 EATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILD 360
Query: 265 EAANYLKFLRSQVKAL 280
EA YLK L+ QV+ +
Sbjct: 361 EAIEYLKSLQMQVQIM 376
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 325 RRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMM 371
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERISER+R+LQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 146 ATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 202
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 7/76 (9%)
Query: 212 EVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLD 264
++ E PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K + A +LD
Sbjct: 134 KISEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 193
Query: 265 EAANYLKFLRSQVKAL 280
E NY++ L+ QV+ L
Sbjct: 194 EIINYIQSLQRQVEFL 209
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 207 VNLGLEVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DT 259
V + + E PK + + +T+ ++A R RRERISER++ LQ LVPG +K+
Sbjct: 229 VKMSSQTGEAPKEDYIHVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGK 288
Query: 260 ASMLDEAANYLKFLRSQVKAL 280
A MLDE NY++ L+ QV+ L
Sbjct: 289 AVMLDEIINYVQSLQRQVEFL 309
>gi|388500584|gb|AFK38358.1| unknown [Lotus japonicus]
Length = 444
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+P K RI T + R+E++ +RI LQ+LV K DTAS+L EA +Y+KFL
Sbjct: 313 EPALKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIDYIKFLHD 372
Query: 276 QVKALENP 283
QV L P
Sbjct: 373 QVNVLSTP 380
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 218 KRKNVRISTDPQ--TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+R +++ S D Q ++ ++RR +I+E+++ LQ+L+P +K D ASMLDEA YLK L+
Sbjct: 85 QRNSLKRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQL 144
Query: 276 QVKAL 280
QV+ L
Sbjct: 145 QVQTL 149
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 40 ATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQVEFL 96
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASM-LDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG K+ ++ LDE NY+K L++QV+ L
Sbjct: 115 ATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSLQNQVEFL 171
>gi|212275398|ref|NP_001130491.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194689282|gb|ACF78725.1| unknown [Zea mays]
gi|414875632|tpg|DAA52763.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 381
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 217 PKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQ 276
PK+ V+ S+ Q+ + R+ER+ +RI L ++V K DTAS+L E Y++FL SQ
Sbjct: 213 PKKARVQTSSSAQSTL-KVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLSQ 271
Query: 277 VKALENP--GHQKPD 289
++AL P GH D
Sbjct: 272 IEALSFPYLGHDNGD 286
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 43 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMM 92
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
T ++RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 6 TTNLQRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 56
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 7/67 (10%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKALE-- 281
+TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV++L
Sbjct: 61 ATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVESLSMK 120
Query: 282 ----NPG 284
NPG
Sbjct: 121 LASVNPG 127
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 161 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 217
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISER+R LQ L P K +TA MLD A Y+K L+ QVK L
Sbjct: 340 ATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVKTL 396
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD +VA R RR +I+ER+R LQ +VPG K M A MLDE NY++ L++QV+ L
Sbjct: 160 ATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFL 216
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISER+R LQ LVP K +T+ MLD A +Y+K L+ Q KAL
Sbjct: 350 CATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQFKAL 407
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 142 ATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEFL 198
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 261 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFL 317
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPG 284
R+RR+RI+E++R LQ L+P +K+D ASML+EA YLK L+ QV+ + G
Sbjct: 334 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSTMG 384
>gi|297834858|ref|XP_002885311.1| hypothetical protein ARALYDRAFT_342085 [Arabidopsis lyrata subsp.
lyrata]
gi|297331151|gb|EFH61570.1| hypothetical protein ARALYDRAFT_342085 [Arabidopsis lyrata subsp.
lyrata]
Length = 270
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
KP +K R A+ R+ER+ ERI LQ+LV K D AS+L EA Y+KFL+
Sbjct: 136 KPDKKCKRNQDKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQD 195
Query: 276 QVKALENP 283
Q++ L +P
Sbjct: 196 QIQVLCSP 203
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 214 VEKPK-----RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
VE PK R +TD ++A R RRERIS+R++ LQ LVPG +K + A MLDE
Sbjct: 181 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEII 240
Query: 268 NYLKFLRSQVKALENPGHQKPDHHHSMNYPPTN-LAFSSLP 307
NY++ L+ QV+ L SM N L FS+LP
Sbjct: 241 NYVQSLQRQVEFL------------SMKLATVNPLDFSNLP 269
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RR +I+ER+R LQ +VPG K M A+MLDE NY++ L++QV+ L
Sbjct: 1035 ATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 1091
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPG 284
R+RR+RI+E++R LQ L+P +K+D ASML+EA YLK L+ QV+ + G
Sbjct: 334 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSTMG 384
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 374 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 423
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
E PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE
Sbjct: 129 ELPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 188
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 189 NYIQSLQRQVEFL 201
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPG 284
R+RR+RI+E++R LQ L+P +K+D ASML+EA YLK L+ QV+ + + G
Sbjct: 279 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSSMG 329
>gi|194702476|gb|ACF85322.1| unknown [Zea mays]
Length = 287
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 217 PKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQ 276
PK+ V+ S+ Q+ + R+ER+ +RI L ++V K DTAS+L E Y++FL SQ
Sbjct: 119 PKKARVQTSSSAQSTL-KVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLSQ 177
Query: 277 VKALENP--GHQKPD 289
++AL P GH D
Sbjct: 178 IEALSFPYLGHDNGD 192
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 367 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 416
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISER+R LQ LVP K +TA MLD A +Y+K L+ Q K L +
Sbjct: 289 ATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQFKTLSD 347
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 212 EVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLD 264
EV E P + + + +TD ++A R RRE+ISER+++LQ LVP +K+ A MLD
Sbjct: 20 EVAEDPHKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLD 79
Query: 265 EAANYLKFLRSQVKAL 280
E NY++ L+ QV+ L
Sbjct: 80 EIINYVQSLQRQVEFL 95
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR +ISERIR LQ LVP K +TA MLD A +Y+K L+ QVK L
Sbjct: 167 ATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQVKVL 223
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHHS 293
R+RR+RI+E++R LQ L+P +K+D ASML+EA YLK L+ QV+ + G
Sbjct: 338 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSTMGTA------G 391
Query: 294 MNYPPTNLAFSSLPFNNNSFPVQTHF 319
M PP L + P HF
Sbjct: 392 MCMPPM------LAMQHMQMPPMAHF 411
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 223 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFL 279
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALE-- 281
+TD ++A R RRE+IS+R+++LQ LVPG +K + A MLDE NY++ L+ QV+ L
Sbjct: 81 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMK 140
Query: 282 ----NPGHQKPDHHHSMNYPPTNLAFSSLPFNNNSFPVQT 317
NP + D ++ N ++ S P ++ FP++T
Sbjct: 141 LATVNP---QLDFNNLPNLLAKDMHQSCSPLQSSHFPLET 177
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
+ PK + I +T+ ++A R RRE+ISER++ LQ LVPG SK + A MLDE
Sbjct: 254 DAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEII 313
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 314 NYVQSLQRQVEFL 326
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVK----- 278
+TD ++ R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+
Sbjct: 139 ATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIINYVQSLQRQVEVARKA 198
Query: 279 -----ALENPGHQKPDHHHSMNYPPTNLAFSSLPFNNNSFPVQTHFSLQN 323
++ P +P H T L LPF S + F Q+
Sbjct: 199 AKTTGGVKKPNGYRPRIHKYQK--STELLIRKLPFQRLSQNFKADFRFQS 246
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RR +I+ER+R LQ +VPG K M A+MLDE NY++ L++QV+ L
Sbjct: 1046 ATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 1102
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 215 EKPKRKNVRISTDPQTVAA------RQRRERISERIRVLQRLVPGGSKMDTASMLDEAAN 268
E P R IST AA R+RR+RI+++++ LQ+LVP SK D ASMLDE
Sbjct: 245 EPPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIE 304
Query: 269 YLKFLRSQVK 278
+LK L++QV+
Sbjct: 305 HLKQLQAQVQ 314
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 215 EKPKRKNVRISTDPQTVAA------RQRRERISERIRVLQRLVPGGSKMDTASMLDEAAN 268
E P R IST AA R+RR+RI+++++ LQ+LVP SK D ASMLDE
Sbjct: 245 EPPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIE 304
Query: 269 YLKFLRSQVK 278
+LK L++QV+
Sbjct: 305 HLKQLQAQVQ 314
>gi|356542232|ref|XP_003539573.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
Length = 339
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+P K R T A + R+E++ +RI LQ+LV K DTAS+L EA Y+KFL
Sbjct: 211 EPAPKRTRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHE 270
Query: 276 QVKALENP 283
QV AL P
Sbjct: 271 QVTALSTP 278
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+I++R+++LQ LVPG +K+ TA +LDE N+++FL+ QV+ L
Sbjct: 189 ATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQFLQRQVEIL 245
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 7/68 (10%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKALE-- 281
+TD ++A R RRE+ISER++ LQ LVPG K+ A MLDE NY++ L+ QV++L
Sbjct: 395 ATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQVESLSMK 454
Query: 282 ----NPGH 285
NP H
Sbjct: 455 VASVNPTH 462
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 7/78 (8%)
Query: 210 GLEVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASM 262
G + + PK + + + +T+ ++A R RRE+ISER++ LQ LVPG SK+ A M
Sbjct: 288 GAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 347
Query: 263 LDEAANYLKFLRSQVKAL 280
LDE NY++ L+ QV+ L
Sbjct: 348 LDEIINYVQSLQRQVEFL 365
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISER++ LQ LVP K +TA MLDEA Y+K L++QVK L
Sbjct: 22 ATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQVKDL 78
>gi|297813903|ref|XP_002874835.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297320672|gb|EFH51094.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K R+ T + + R+E++ +RI LQ+LV K DTAS+L+EA Y+KFL+ QV
Sbjct: 160 KRQRLETLSPLPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTV 219
Query: 280 LENP 283
L NP
Sbjct: 220 LSNP 223
>gi|242088389|ref|XP_002440027.1| hypothetical protein SORBIDRAFT_09g024720 [Sorghum bicolor]
gi|241945312|gb|EES18457.1| hypothetical protein SORBIDRAFT_09g024720 [Sorghum bicolor]
Length = 344
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 217 PKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQ 276
P +K R++T + R+E++ +RI LQ+LV K DTAS+L EA Y++FL Q
Sbjct: 218 PAKKKPRVATPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIRFLHDQ 277
Query: 277 VKALENP 283
V +L +P
Sbjct: 278 VASLSSP 284
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASM-LDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG K+ ++ LDE NY+K L++QV+ L
Sbjct: 115 ATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEFL 171
>gi|37991892|gb|AAR06338.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 384
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 228 PQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
P+ +++ER+ + +R L+ ++PGG +MDT ++LDEA YLK L+ +VK L
Sbjct: 204 PEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVKKL 256
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
+ PK + I +T+ ++A R RRE+ISER++ LQ LVPG SK + A MLDE
Sbjct: 254 DAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEII 313
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 314 NYVQSLQRQVEFL 326
>gi|297852680|ref|XP_002894221.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340063|gb|EFH70480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 217
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
KP ++ R T A+ ++E++ ERI LQ+LV K DTAS+L E Y+KFL+
Sbjct: 62 KPGKRCKRDQTKSSVGNAKVKKEKVGERITALQQLVSPYGKTDTASVLHETMGYIKFLQD 121
Query: 276 QVKALENP 283
QV+ L P
Sbjct: 122 QVQVLSTP 129
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RIS+RIR LQ LVP K +TA ML+EA Y+K L+ Q++ L
Sbjct: 193 ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQEL 249
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R+RR++I++R++ LQ+LVP SK D ASMLDE YLK L++QV+
Sbjct: 38 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 82
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 7/78 (8%)
Query: 210 GLEVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASM 262
G + + PK + + + +T+ ++A R RRE+ISER++ LQ LVPG SK+ A M
Sbjct: 393 GAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 452
Query: 263 LDEAANYLKFLRSQVKAL 280
LDE NY++ L+ QV+ L
Sbjct: 453 LDEIINYVQSLQRQVEFL 470
>gi|194704680|gb|ACF86424.1| unknown [Zea mays]
gi|414875631|tpg|DAA52762.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 217 PKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQ 276
PK+ V+ S+ Q+ + R+ER+ +RI L ++V K DTAS+L E Y++FL SQ
Sbjct: 213 PKKARVQTSSSAQSTL-KVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLSQ 271
Query: 277 VKALENP--GHQKPD 289
++AL P GH D
Sbjct: 272 IEALSFPYLGHDNGD 286
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 71 ATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 127
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+P+ K R + + ++ ++RR RI+E+++ LQ L+P SK D ASMLD+A YLK L+
Sbjct: 38 RPRGKRSR-AAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQL 96
Query: 276 QVKALENPGHQKPDHHHSMNYPPTNLA 302
QV+ L + + PP NL+
Sbjct: 97 QVQML--------SMRNGLYLPPGNLS 115
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 178 ATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 234
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR++I++R++ LQ+LVP SK D ASMLDE YLK L++Q++ +
Sbjct: 280 RKRRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQLQAQLQMI 326
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 380 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 436
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
S D + R+RR+RI+E++R LQ L+P +K D SMLDEA +YLK L+ Q++ L
Sbjct: 21 SADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 76
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RIS+RIR LQ LVP K +TA ML+EA Y+K L+ Q++ L
Sbjct: 191 ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQEL 247
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISER+R LQ LVP K +TA MLD A Y+K L+ Q K L
Sbjct: 307 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQFKTL 363
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ+LVPG ++ A +LDE NY++ L++QV+ L
Sbjct: 152 ATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQVEFL 208
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RIS+RIR LQ LVP K +TA ML+EA Y+K L+ Q++ L
Sbjct: 185 ATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQIQEL 241
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+ER++ LQ L+P +K D ASMLDEA Y+K L+ Q++ +
Sbjct: 300 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQVM 349
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 335 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMM 384
>gi|147818973|emb|CAN67117.1| hypothetical protein VITISV_026466 [Vitis vinifera]
Length = 365
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
+A R+RRE++S+R L LVPG KMD AS+L +A YLK L+ +VK+LE
Sbjct: 192 MAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYLKQLQERVKSLE 242
>gi|359480528|ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
Length = 365
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
+A R+RRE++S+R L LVPG KMD AS+L +A YLK L+ +VK+LE
Sbjct: 192 MAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYLKQLQERVKSLE 242
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+P+ K R + + ++ ++RR RI+E+++ LQ L+P SK D ASMLD+A YLK L+
Sbjct: 38 RPRGKRSR-AAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQL 96
Query: 276 QVKALENPGHQKPDHHHSMNYPPTNLA 302
QV+ L + + PP NL+
Sbjct: 97 QVQML--------SMRNGLYLPPGNLS 115
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K+D ASML+EA YLK L+ QV+ +
Sbjct: 345 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 391
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RR +I+ER+R LQ +VPG K M A+MLDE NY++ L++QV+ L
Sbjct: 152 ATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 208
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ+L+P +K D ASML+EA YLK L+ Q++ +
Sbjct: 370 RRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVM 416
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+P+ K R + + ++ ++RR RI+E+++ LQ L+P SK D ASMLD+A YLK L+
Sbjct: 40 RPRGKRSR-AAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQL 98
Query: 276 QVKALENPGHQKPDHHHSMNYPPTNLA 302
QV+ L + + PP NL+
Sbjct: 99 QVQML--------SMRNGLYLPPGNLS 117
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+IS+R++VLQ LVPG +K + A MLDE NY++ L+ QV+ L
Sbjct: 181 ATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFL 237
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 7/74 (9%)
Query: 214 VEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEA 266
E PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE
Sbjct: 134 AEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 193
Query: 267 ANYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 194 INYIQSLQRQVEFL 207
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQV 277
R +T P+++A R RR RISER+R LQ LVP K +TA MLD A Y+K L+ Q
Sbjct: 295 RAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQF 354
Query: 278 KAL 280
K L
Sbjct: 355 KTL 357
>gi|224105829|ref|XP_002313947.1| predicted protein [Populus trichocarpa]
gi|222850355|gb|EEE87902.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 196 EMIYRAAAFRPVNLGLEVVEKPKRKNV---RIS-TDPQTVAARQRRERISERIRVLQRLV 251
+M+ F N ++ + P+R + R+S + +A R+RRE++S+R L +V
Sbjct: 111 DMVVSQDIFGSQNYVIKGCQGPERISTNTPRLSQSQDHIIAERKRREKLSQRFIALSAVV 170
Query: 252 PGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
PG KMD AS+L +A YLK L+ +VK LE +K
Sbjct: 171 PGLKKMDKASVLGDAIKYLKQLQEKVKTLEEQTKRK 206
>gi|7267277|emb|CAB81059.1| putative protein [Arabidopsis thaliana]
Length = 296
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K R+ T + + R+E++ +RI LQ+LV K DTAS+L+EA Y+KFL+ QV
Sbjct: 157 KRPRLETLSPLPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTV 216
Query: 280 LENP 283
L NP
Sbjct: 217 LSNP 220
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K+D ASML+EA YLK L+ QV+ +
Sbjct: 345 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 391
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD +++ R RRERISER+R+LQ LVPG K+ A +LDE NY++ L++QV+ L
Sbjct: 112 ATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQVEFL 168
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 353 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 409
>gi|212722848|ref|NP_001132537.1| uncharacterized protein LOC100194000 [Zea mays]
gi|194694664|gb|ACF81416.1| unknown [Zea mays]
gi|413933004|gb|AFW67555.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 374
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
R RRER+ ERI LQ+LV K DTAS+L EA Y++FL QV+ L +P Q+
Sbjct: 219 RVRRERLGERIIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYMQR 272
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+IS+R++VLQ LVPG +K + A MLDE NY++ L+ QV+ L
Sbjct: 181 ATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFL 237
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 86 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 142
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 343 RRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMM 389
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 343 RRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMM 389
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 36/45 (80%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R+RR++I++R++ LQ+LVP +K D ASMLDE YLK L++QV+
Sbjct: 303 RKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR++I++R++ LQ+LVP SK D ASMLDE Y+K L++QV+ +
Sbjct: 244 RRRRDKINQRMKELQKLVPNSSKTDKASMLDEVIQYMKQLQAQVQMM 290
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E+++ LQ L+P +K D ASMLDEA +YLK L+ QV+ +
Sbjct: 315 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMM 364
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 212 EVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLD 264
E E K + + + +T+ ++A R RRE+ISER+++LQ LVPG SK+ A MLD
Sbjct: 236 ETYESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 295
Query: 265 EAANYLKFLRSQVKAL 280
E NY++ L+ QV+ L
Sbjct: 296 EIINYVQSLQRQVEFL 311
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 36/45 (80%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
R+RR++I++R++ LQ+LVP +K D ASMLDE YLK L++QV+
Sbjct: 303 RKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISER+R LQ L P K +TA MLD A Y+K L+ QVK L
Sbjct: 178 ATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVKTL 234
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 213 VVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLK 271
V K R N +T P+++A R RR +ISER++ LQ LVP + +TA MLD+A Y+K
Sbjct: 374 VYLKTLRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVK 433
Query: 272 FLRSQVKALEN 282
L+ QV+ L N
Sbjct: 434 QLQLQVQELTN 444
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 283 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 332
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K+D ASML+EA YLK L+ QV+ +
Sbjct: 271 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 317
>gi|218563528|sp|Q9M0X8.2|BH114_ARATH RecName: Full=Transcription factor bHLH114; AltName: Full=Basic
helix-loop-helix protein 114; Short=AtbHLH114;
Short=bHLH 114; AltName: Full=Transcription factor EN
65; AltName: Full=bHLH transcription factor bHLH114
Length = 298
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K R+ T + + R+E++ +RI LQ+LV K DTAS+L+EA Y+KFL+ QV
Sbjct: 159 KRPRLETLSPLPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTV 218
Query: 280 LENP 283
L NP
Sbjct: 219 LSNP 222
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASML+EA YLK L+ QV+ +
Sbjct: 126 LSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 175
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
+ PK + I +T+ ++A R RRE+ISER++ LQ LVPG SK + A MLDE
Sbjct: 256 DAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEII 315
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 316 NYVQSLQRQVEFL 328
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 43/58 (74%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R +T+ ++ R+RR+RI++++R LQ L+P +K+D ASML EA +YLK L+ QV+ +
Sbjct: 380 RRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMM 437
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 308 LSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMM 357
>gi|449438633|ref|XP_004137092.1| PREDICTED: transcription factor bHLH123-like [Cucumis sativus]
gi|449495752|ref|XP_004159934.1| PREDICTED: transcription factor bHLH123-like [Cucumis sativus]
Length = 254
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 228 PQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
P + +R+E++ ERI LQ+LV K DTAS+L EA Y+KFL QV+ L +P QK
Sbjct: 139 PCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQVQVLCSPYLQK 198
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR +ISER+R LQ LVP K +TA MLD A +Y+K L+ QV+ L +
Sbjct: 340 ATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQTLSD 398
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 214 VEKPK-----RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
VE PK R +TD ++A R RRERIS+R++ LQ LVPG +K + A MLDE
Sbjct: 176 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEII 235
Query: 268 NYLKFLRSQVKALENPGHQKPDHHHSMNYPPTN-LAFSSLP 307
NY++ L+ QV+ L SM N L FS+LP
Sbjct: 236 NYVQSLQRQVEFL------------SMKLATVNPLDFSNLP 264
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 312 LSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMM 361
>gi|356563476|ref|XP_003549988.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 341
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 226 TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGH 285
T +A R RRE+IS+++ L L+P KMD S+L EA Y+K L+ QVK LE
Sbjct: 153 TQDHIIAERMRREKISQKLIALSALIPDLKKMDKVSVLGEAIRYVKQLKEQVKVLEEQSK 212
Query: 286 QK 287
+K
Sbjct: 213 RK 214
>gi|359473541|ref|XP_002268359.2| PREDICTED: transcription factor bHLH111 [Vitis vinifera]
gi|297738310|emb|CBI27511.3| unnamed protein product [Vitis vinifera]
Length = 508
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 213 VVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
V++KPK+++ +S+ V + + +I +RI LQ++V K DTAS+L EA Y+KF
Sbjct: 382 VMKKPKQESSAVSS----VKMQAPKVKIGDRITALQQIVSPFGKTDTASVLYEAIGYIKF 437
Query: 273 LRSQVKALENP 283
L+ QV+ L NP
Sbjct: 438 LQEQVQLLSNP 448
>gi|242038045|ref|XP_002466417.1| hypothetical protein SORBIDRAFT_01g007440 [Sorghum bicolor]
gi|241920271|gb|EER93415.1| hypothetical protein SORBIDRAFT_01g007440 [Sorghum bicolor]
Length = 324
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
R RRER+ ERI LQ+LV K DTAS+L EA Y++FL QV+ L +P Q+
Sbjct: 180 RVRRERLGERIIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYMQR 233
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 43/58 (74%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R +T+ ++ R+RR+RI++++R LQ L+P +K+D ASML EA +YLK L+ QV+ +
Sbjct: 374 RRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMM 431
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 376 ATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 432
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 132 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQYL 181
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 158 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 214
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 176 NSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRIST------DPQ 229
+SS S+ E +P A K + + F+ ++ E E K+ + ST +
Sbjct: 209 DSSGSAEPVEREPMADRKRKGREHEESEFQSEDVDFESPEAKKQVHGSTSTKRSRAAEVH 268
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 269 NLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 319
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 376 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 432
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 323 LSERRRRDRINEKMKALQELIPRCNKTDKASMLDEAIEYLKTLQLQVQMM 372
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 273 LSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMM 322
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 137 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 193
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR +ISER+R LQ LVP K +TA MLD A +Y+K L+ QV+ L
Sbjct: 337 ATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQTL 393
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
E PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE
Sbjct: 137 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 196
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 197 NYIQSLQRQVEFL 209
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 204 FRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASML 263
F ++ E K R + + ++ R+RR+RI+E+++ LQ L+P +K D ASML
Sbjct: 294 FESADVTCEPAHKTATAKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASML 353
Query: 264 DEAANYLKFLRSQVK 278
DEA YLK L+ Q++
Sbjct: 354 DEAIEYLKSLQLQLQ 368
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 332 ATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 388
>gi|356546702|ref|XP_003541762.1| PREDICTED: transcription factor bHLH112-like [Glycine max]
Length = 437
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+P K RI T + R+E++ +RI LQ+LV K DTAS+L EA Y+KFL
Sbjct: 306 EPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHD 365
Query: 276 QVKALENP 283
QV L P
Sbjct: 366 QVSVLSTP 373
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISER+R LQ LVP K +TA MLD A +Y+K L+ Q K L +
Sbjct: 37 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQYKTLSD 95
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 130 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 179
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 255 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 311
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 168 NFQLQASNNSSVSSS---IEEPDPEAIAHMKEMIYRAAAFRPVNLGLE-VVEKPKRKNVR 223
N+ S+ +S S + E D H + A ++L LE ++E VR
Sbjct: 26 NYDYMGSSGIDISPSGKRLREDDSAKFGHQLKEEQGTGAGSLLDLDLERMLEDSVPCRVR 85
Query: 224 ----ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVK 278
+T P+++A R RR RIS+RIR LQ LVP K +TA ML+EA Y+K L+ Q++
Sbjct: 86 AKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQIE 145
Query: 279 AL 280
L
Sbjct: 146 EL 147
>gi|326500464|dbj|BAK06321.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 320
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
R R+ER+ ERI LQ+LV K DTAS+L EA Y++FL QV+ L +P Q+
Sbjct: 182 RARKERLGERILALQQLVSPFGKTDTASVLHEALGYIRFLHDQVQVLSSPYMQR 235
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 379 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 435
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 176 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 232
>gi|414585296|tpg|DAA35867.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 463
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 9/144 (6%)
Query: 162 PSSANINFQLQ---ASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEK-- 216
PS+A F L A + +S S+ +P P A + + A ++ K
Sbjct: 263 PSAAGFGFGLGVPPAPDQASSVRSVVKPSPAAARATATLALKTALEGVGESASSIITKKK 322
Query: 217 ----PKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
P K R+ T + R+E++ +RI LQ+LV K DTAS+L E Y+KF
Sbjct: 323 ANGEPALKKPRLETPSPLPTFKVRKEKLGDRITALQQLVAPFGKTDTASVLHETIEYIKF 382
Query: 273 LRSQVKALENPGHQKPDHHHSMNY 296
L QV L P + HH + +
Sbjct: 383 LHDQVGVLSAPYLKNNGHHQVLRH 406
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RR+RISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 254 ATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFL 310
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 158 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 214
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RR +I+ER++ LQ +VPG K M A+MLDE NY++ L++QV+ L
Sbjct: 154 ATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 210
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 7/71 (9%)
Query: 217 PKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANY 269
PK + + + +T+ ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY
Sbjct: 242 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINY 301
Query: 270 LKFLRSQVKAL 280
++ L+ QV+ L
Sbjct: 302 VQSLQRQVEFL 312
>gi|255538730|ref|XP_002510430.1| transcription factor, putative [Ricinus communis]
gi|223551131|gb|EEF52617.1| transcription factor, putative [Ricinus communis]
Length = 436
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 211 LEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYL 270
L+ K R R S P V R+E++ +RI LQ+LV K DTAS+L EA Y+
Sbjct: 301 LQAAPKKSRLETRASCPPFKV----RKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYI 356
Query: 271 KFLRSQVKALENP 283
KFL++QV+ L P
Sbjct: 357 KFLQNQVETLSVP 369
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 270 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 326
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 636 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 692
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+ Q++
Sbjct: 33 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQV 78
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 379 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 435
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 248 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 304
>gi|326526363|dbj|BAJ97198.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 27/199 (13%)
Query: 102 SVQYVNNGRIVHQEELRPGSTKRKNIDDHQSEQFHLFQGGGFK--------LISENPPKA 153
S+Q + R+V EEL G+ + ++ + GG F + + +PP +
Sbjct: 38 SLQALREQRLV-LEELITGANPASSGSSGETTDGSVGCGGNFSSPAAMEHDVWTPSPPTS 96
Query: 154 --KKPRLDKRPSSANI-----NF----QLQASNNSSVSSSIEEPDPEAIAHMKEMIYRAA 202
+ PRL + ++ NF L AS++ ++ S P + + + RAA
Sbjct: 97 AWRAPRLSMKAGGTSLPVTSWNFCAASALPASDDGTLDSGSAGPAVPEMVYGSQPTRRAA 156
Query: 203 AFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASM 262
A P G P ++ +A R+RRE+I++R L ++PG KMD A++
Sbjct: 157 ARSPTGTGPVSSGPPYAQD-------HIMAERKRREKINQRFIELSTVIPGLKKMDKATI 209
Query: 263 LDEAANYLKFLRSQVKALE 281
L +A ++K L+ ++KALE
Sbjct: 210 LSDATRHVKELQEKIKALE 228
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 118 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 167
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASM-LDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG K+ ++ LDE NY+K L++QV+ L
Sbjct: 115 ATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEFL 171
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RR +I+ER++ LQ +VPG K M A+MLDE NY++ L++QV+ L
Sbjct: 154 ATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 210
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 260 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 316
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 164 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 220
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 215 EKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
++P K + + ++ R+RR+RI+E++R LQ LVP +K D AS+LDEA YLK L+
Sbjct: 220 KRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQ 279
Query: 275 SQVKAL 280
QV+ +
Sbjct: 280 MQVQIM 285
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 149 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 205
>gi|255587936|ref|XP_002534446.1| transcription factor, putative [Ricinus communis]
gi|223525277|gb|EEF27938.1| transcription factor, putative [Ricinus communis]
Length = 305
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 210 GLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANY 269
G E K + +N ST P A + R+E++ +RI LQ+LV K DTAS+L EA Y
Sbjct: 174 GSETATK-RPRNETASTVP---AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEY 229
Query: 270 LKFLRSQVKALENPGHQK--PDHHH 292
+KFL QV L P + P HH
Sbjct: 230 IKFLHEQVTVLSTPYMKSGAPIHHQ 254
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 212 EVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLD 264
EV E K + I +T+ ++A R RRE+ISER+++LQ LVPG SK+ A MLD
Sbjct: 244 EVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 303
Query: 265 EAANYLKFLRSQVKAL 280
E NY++ L+ QV+ L
Sbjct: 304 EIINYVQSLQRQVEFL 319
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 215 EKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
++P K + + ++ R+RR+RI+E++R LQ LVP +K D AS+LDEA YLK L+
Sbjct: 216 KRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQ 275
Query: 275 SQVKAL 280
QV+ +
Sbjct: 276 MQVQIM 281
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR +I+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 98 LSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 147
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 265 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 321
>gi|115453363|ref|NP_001050282.1| Os03g0391700 [Oryza sativa Japonica Group]
gi|40539023|gb|AAR87280.1| expressed protein (with alternative splicing) [Oryza sativa
Japonica Group]
gi|108708576|gb|ABF96371.1| expressed protein [Oryza sativa Japonica Group]
gi|108708577|gb|ABF96372.1| expressed protein [Oryza sativa Japonica Group]
gi|113548753|dbj|BAF12196.1| Os03g0391700 [Oryza sativa Japonica Group]
gi|215686766|dbj|BAG89616.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 315
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++RRERI E + L+++VPGG D ++LDEA YLK+L+ +VK L
Sbjct: 264 KRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTL 310
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 215 EKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
++P K + + ++ R+RR+RI+E++R LQ LVP +K D AS+LDEA YLK L+
Sbjct: 219 KRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQ 278
Query: 275 SQVKAL 280
QV+ +
Sbjct: 279 MQVQIM 284
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+ Q++ +
Sbjct: 41 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVM 90
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 23 ATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 79
>gi|222625055|gb|EEE59187.1| hypothetical protein OsJ_11123 [Oryza sativa Japonica Group]
Length = 359
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++RRERI E + L+++VPGG D ++LDEA YLK+L+ +VK L
Sbjct: 308 KRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTL 354
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
++KP +VR +TD ++A R RRE+IS++++ LQ +VPG +K+ A MLDE N
Sbjct: 117 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIIN 176
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 177 YVQSLQQQVEFL 188
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 151 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 200
>gi|359496230|ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
gi|297735889|emb|CBI18658.3| unnamed protein product [Vitis vinifera]
Length = 464
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+P K RI T + R+E++ +RI LQ+LV K DTAS+L EA Y+KFL
Sbjct: 336 EPAFKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHD 395
Query: 276 QVKALENP 283
QV L P
Sbjct: 396 QVSVLSTP 403
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVK 278
+T P+++A R RR RISER+R LQ LVP K +T+ MLD A +Y+K L+ QVK
Sbjct: 369 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVK 423
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
++KP +VR +TD ++A R RRE+IS++++ LQ +VPG +K+ A MLDE N
Sbjct: 117 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIIN 176
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 177 YVQSLQQQVEFL 188
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RR +I+ER+R LQ +VPG K M A+MLDE NY++ L++QV+ L
Sbjct: 155 ATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQNQVELL 211
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 98 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFL 154
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+I+ER+++LQ LVPG +K + AS+LDE NY++ L QV+ L
Sbjct: 121 ATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQVEFL 177
>gi|224081405|ref|XP_002306398.1| predicted protein [Populus trichocarpa]
gi|222855847|gb|EEE93394.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
+ R RRE++S+R L +VPG KMD AS+L +A YLK+L+ +VK LE +K
Sbjct: 8 IEERNRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKYLQERVKTLEEQAAKK 64
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ Q++ L
Sbjct: 83 ATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFL 139
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 212 EVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLD 264
EV E K + I +T+ ++A R RRE+ISER+++LQ LVPG SK+ A MLD
Sbjct: 245 EVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 304
Query: 265 EAANYLKFLRSQVKAL 280
E NY++ L+ QV+ L
Sbjct: 305 EIINYVQSLQRQVEFL 320
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 267 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 323
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 267 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 323
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ Q++ L
Sbjct: 76 ATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEFL 132
>gi|293336192|ref|NP_001169880.1| uncharacterized protein LOC100383774 [Zea mays]
gi|224032155|gb|ACN35153.1| unknown [Zea mays]
Length = 421
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 9/144 (6%)
Query: 162 PSSANINFQLQ---ASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEK-- 216
PS+A F L A + +S S+ +P P A + + A ++ K
Sbjct: 263 PSAAGFGFGLGVPPAPDQASSVRSVVKPSPAAARATATLALKTALEGVGESASSIITKKK 322
Query: 217 ----PKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
P K R+ T + R+E++ +RI LQ+LV K DTAS+L E Y+KF
Sbjct: 323 ANGEPALKKPRLETPSPLPTFKVRKEKLGDRITALQQLVAPFGKTDTASVLHETIEYIKF 382
Query: 273 LRSQVKALENPGHQKPDHHHSMNY 296
L QV L P + HH + +
Sbjct: 383 LHDQVGVLSAPYLKNNGHHQVLRH 406
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 212 EVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLD 264
EV E K + I +T+ ++A R RRE+ISER+++LQ LVPG SK+ A MLD
Sbjct: 234 EVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 293
Query: 265 EAANYLKFLRSQVKAL 280
E NY++ L+ QV+ L
Sbjct: 294 EIINYVQSLQRQVEFL 309
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ Q++ L
Sbjct: 80 ATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFL 136
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Query: 205 RPVNLGLEVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-M 257
+PV + + PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K +
Sbjct: 132 KPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 191
Query: 258 DTASMLDEAANYLKFLRSQVKAL 280
A +LDE NY++ L+ QV+ L
Sbjct: 192 GKALVLDEIINYIQSLQRQVEFL 214
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 315 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 364
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 218 KRKNVRISTDPQ--TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+R +++ + D Q ++ ++RR +I+E+++ LQ+L+P +K D ASMLDEA YLK L+
Sbjct: 84 QRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQL 143
Query: 276 QVKAL 280
QV+ L
Sbjct: 144 QVQTL 148
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAAN 268
++KP +VR +TD ++A R RRE+IS++++ LQ +VPG +K+ A MLDE N
Sbjct: 133 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIIN 192
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 193 YVQSLQQQVEFL 204
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
++KP +VR +TD ++A R RRE+IS++++ LQ +VPG +K+ A MLDE N
Sbjct: 129 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIIN 188
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 189 YVQSLQQQVEFL 200
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 212 EVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYL 270
EVV R+ +TD ++A R RR +I+ER++ LQ +VPG K M A+MLDE NY+
Sbjct: 145 EVVHVRARRGQ--ATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYV 202
Query: 271 KFLRSQVKAL 280
+ L++QV+ L
Sbjct: 203 QSLQNQVEFL 212
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
S D + R+RR+RI+E++R LQ L+P +K D SMLDEA +YLK L+ Q++ L
Sbjct: 20 SADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 75
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDH 290
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L +
Sbjct: 183 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM--RNGINL 240
Query: 291 HHSMNYPPTNL 301
HH + P T L
Sbjct: 241 HHPLCLPGTTL 251
>gi|226492755|ref|NP_001152376.1| DNA binding protein [Zea mays]
gi|195655687|gb|ACG47311.1| DNA binding protein [Zea mays]
Length = 455
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 217 PKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQ 276
P K R+ T + R+E++ +R+ LQ+LV K DTAS+L E Y+KFL Q
Sbjct: 322 PAFKKSRLQTPSPLPTFKVRKEKVGDRVTALQQLVAPFGKTDTASVLHETIEYIKFLHDQ 381
Query: 277 VKALENP-----GHQKP 288
V L P GHQ P
Sbjct: 382 VGVLSAPYLKNNGHQVP 398
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+I ER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 263 ATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 319
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+P+ K R + + ++ ++RR RI+E+++ LQ L+P SK D ASMLD+A YLK L+
Sbjct: 25 RPRGKRSR-AAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQL 83
Query: 276 QVKALENPGHQKPDHHHSMNYPPTNLA 302
QV+ L + + PP NL+
Sbjct: 84 QVQML--------SMRNGLYLPPVNLS 102
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR +I+E+++ LQ+L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R+RR RISE++R LQ LVP K TA MLD A ++K L+SQ++AL++
Sbjct: 148 ATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQLQALKH 206
>gi|449438279|ref|XP_004136916.1| PREDICTED: transcription factor bHLH25-like [Cucumis sativus]
gi|449511253|ref|XP_004163905.1| PREDICTED: transcription factor bHLH25-like [Cucumis sativus]
Length = 340
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
+A R+RRE++S+R L +VPG KMD AS+L +A YLK L+ +VK LE +K
Sbjct: 174 LAERRRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRK 230
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR +I+E+++ LQ+L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 194 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 243
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K+D ASML+EA YLK L+ QV+ +
Sbjct: 224 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMM 270
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ Q++ + G P
Sbjct: 288 RRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGGGMAP 342
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 147 LSEKRRRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 196
>gi|226495765|ref|NP_001142090.1| uncharacterized protein LOC100274252 [Zea mays]
gi|194707072|gb|ACF87620.1| unknown [Zea mays]
gi|414872946|tpg|DAA51503.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP 283
R RRER+ ERI LQ+LV K DTAS+L EA Y++FL QV+ L P
Sbjct: 175 RVRRERLGERIVALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSTP 224
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Query: 205 RPVNLGLEVVEKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-M 257
+PV + + PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K +
Sbjct: 132 KPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 191
Query: 258 DTASMLDEAANYLKFLRSQVKAL 280
A +LDE NY++ L+ QV+ L
Sbjct: 192 GKALVLDEIINYIQSLQRQVEFL 214
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RR +I+ER++ LQ +VPG K M A+MLDE NY++ L++QV+ L
Sbjct: 143 ATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 199
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ +
Sbjct: 277 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 326
>gi|147765878|emb|CAN73367.1| hypothetical protein VITISV_032596 [Vitis vinifera]
Length = 545
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 213 VVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
V++KPK+++ +S+ V + + +I +RI LQ++V K DTAS+L EA Y+KF
Sbjct: 382 VMKKPKQESSTVSS----VKMQAPKVKIGDRITALQQIVSPFGKTDTASVLYEAIGYIKF 437
Query: 273 LRSQVKALENP 283
L+ QV+ L NP
Sbjct: 438 LQEQVQLLSNP 448
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 263 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 319
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISER+R LQ LVP K +TA MLD A Y+K L+ Q K L +
Sbjct: 278 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQYKTLSD 336
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+P+ K R + + ++ ++RR RI+E+++ LQ L+P SK D ASMLD+A YLK L+
Sbjct: 47 RPRGKRSR-AAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQL 105
Query: 276 QVKALENPGHQKPDHHHSMNYPPTNLA 302
QV+ L + + PP NL+
Sbjct: 106 QVQML--------SMRNGLYLPPVNLS 124
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
++KP +VR +TD ++A R RRE+IS++++ LQ +VPG +K+ A MLDE N
Sbjct: 133 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIIN 192
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 193 YVQSLQQQVEFL 204
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|224060969|ref|XP_002300300.1| predicted protein [Populus trichocarpa]
gi|222847558|gb|EEE85105.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
+A R+RRE++S+R L +VPG KMD AS+L +A YLK L+ +VK LE +K
Sbjct: 8 IAERKRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRK 64
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 203 MSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 252
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Query: 212 EVVEKPKRKN-VRISTDPQT--VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAAN 268
++V++ + N V+ S +P+ ++ ++RRE+I++++R L+ L+P +K+D ASMLD+A +
Sbjct: 321 DMVKQDREGNRVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKVDKASMLDDAID 380
Query: 269 YLKFLRSQVKA 279
YLK L+ Q++A
Sbjct: 381 YLKTLKLQLQA 391
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
++KP +VR +TD ++A R RRE+IS++++ LQ +VPG +K+ A MLDE N
Sbjct: 133 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIIN 192
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 193 YVQSLQQQVEFL 204
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
++KP +VR +TD ++A R RRE+IS++++ LQ +VPG +K+ A MLDE N
Sbjct: 133 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIIN 192
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 193 YVQSLQQQVEFL 204
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ Q++ + G P
Sbjct: 279 RRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGGGMAP 333
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+I ER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 308 ATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE--------- 281
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 168 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRNGIGLHP 227
Query: 282 --NPGHQKPDH--HHSMNYPP------TNLAFSSLPFNNNSFPVQTHFSL 321
PG +P SM + TN+A SLP N P QT F +
Sbjct: 228 MCLPGVLQPTQFSQFSMGFAEENGSQHTNVA-GSLPLNQEK-PEQTVFDI 275
>gi|449460283|ref|XP_004147875.1| PREDICTED: transcription factor bHLH110-like [Cucumis sativus]
Length = 458
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 215 EKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
+ P K R+ + + R+E++ +RI LQ+LV K DTAS+L EA Y+KFL+
Sbjct: 322 QSPPLKKSRLDSRASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQ 381
Query: 275 SQVKALENPGHQKP 288
+QV+ L P + KP
Sbjct: 382 NQVETLSVP-YMKP 394
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 212 EVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLK 271
E +P+ K R + + ++ ++RR +I+E+++ LQ LVP SK D ASMLD+A YLK
Sbjct: 39 EPAGRPRGKRAR-AAEVHNLSEKRRRCKINEKMKALQSLVPNSSKTDKASMLDDAIEYLK 97
Query: 272 FLRSQVKAL 280
L+ QV+ L
Sbjct: 98 HLQLQVQML 106
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
++KP +VR +TD ++A R RRE+IS++++ LQ +VPG +K+ A MLDE N
Sbjct: 133 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIIN 192
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 193 YVQSLQQQVEFL 204
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+P+ K R + + ++ ++RR RI+E+++ LQ L+P SK D ASMLD+A YLK L+
Sbjct: 47 RPRGKRSR-AAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQL 105
Query: 276 QVKALENPGHQKPDHHHSMNYPPTNLA 302
QV+ L + + PP NL+
Sbjct: 106 QVQML--------SMRNGLYVPPVNLS 124
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISER+R LQ LVP K +T+ MLD A +Y+K L+ Q K L
Sbjct: 286 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKIL 342
>gi|218192968|gb|EEC75395.1| hypothetical protein OsI_11883 [Oryza sativa Indica Group]
Length = 414
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++RRERI E + L+++VPGG D ++LDEA YLK+L+ +VK L
Sbjct: 363 KRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTL 409
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+IS+R+++LQ LVPG +K + A MLDE NY++ L+ QV+ L
Sbjct: 284 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 340
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
R+RR+RI+E+++ LQ L+P +K D ASMLDEA YLK L+ Q++ + G P
Sbjct: 279 RRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWMGGGMAP 333
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR +ISER+R LQ LVP K +TA MLD A +Y+K L+ Q + L++
Sbjct: 339 ATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQAQKLQD 397
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASM-LDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG K+ ++ LDE NY+K L++QV+ L
Sbjct: 49 ATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEFL 105
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 248 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 304
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISER+R LQ LVP K +T+ MLD A +Y+K L+ Q K L
Sbjct: 291 CATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKIL 348
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 34 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 90
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 215 EKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
++P K + + ++ R+RR+RI+E++R LQ LVP +K D AS+LDEA YLK L+
Sbjct: 395 KRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQ 454
Query: 275 SQVKAL 280
QV+ +
Sbjct: 455 MQVQIM 460
>gi|225445180|ref|XP_002284145.1| PREDICTED: transcription factor bHLH68 [Vitis vinifera]
gi|297738793|emb|CBI28038.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K R+ P + R+E++ +RI L +LV K DTAS+L EA Y++FL+SQ++A
Sbjct: 190 KKARVQASPTQPTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEA 249
Query: 280 LENP 283
L P
Sbjct: 250 LSLP 253
>gi|147832536|emb|CAN77172.1| hypothetical protein VITISV_041271 [Vitis vinifera]
Length = 342
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K R+ P + R+E++ +RI L +LV K DTAS+L EA Y++FL+SQ++A
Sbjct: 190 KKARVQASPTQPTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEA 249
Query: 280 LENP 283
L P
Sbjct: 250 LSLP 253
>gi|357476085|ref|XP_003608328.1| Transcription factor bHLH25 [Medicago truncatula]
gi|355509383|gb|AES90525.1| Transcription factor bHLH25 [Medicago truncatula]
Length = 327
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
+A R+RRE++S+R L LVPG KMD ++L +A YLK L+ +VK LE + K
Sbjct: 155 IAERKRREKLSQRFIALSALVPGLQKMDKVTVLGDAIKYLKKLQEKVKVLEEEQNMK 211
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
++KP +VR +TD ++A R RRE+IS++++ LQ +VPG +K+ A MLDE N
Sbjct: 133 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIIN 192
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 193 YVQSLQQQVEFL 204
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+IS+R+++LQ LVPG +K + A MLDE NY++ L+ QV+ L
Sbjct: 287 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 343
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAA 267
E PK + + +T+ ++A R RRE+ISER+R+LQ L PG +K+ A MLDE
Sbjct: 197 EAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEII 256
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 257 NYVQSLQQQVEFL 269
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+P+ K R + + ++ ++RR RI+E+++ LQ L+P SK D ASMLD+A YLK L+
Sbjct: 39 RPRGKRSR-AAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKQLQL 97
Query: 276 QVKALENPGHQKPDHHHSMNYPPTNLA 302
QV+ L + + PP NL+
Sbjct: 98 QVQML--------SMRNGLYLPPGNLS 116
>gi|359492693|ref|XP_002281118.2| PREDICTED: transcription factor bHLH110-like [Vitis vinifera]
gi|302142540|emb|CBI19743.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 172 QASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTV 231
Q++N S SSS P +A +K R ++F + K R R S P V
Sbjct: 260 QSTNRPSNSSSKISPFTNGVAEVK----RPSSFLEPK-ATQATPKKSRLESRASCPPIKV 314
Query: 232 AARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP 283
R+E++ +RI LQ+LV K DTAS+L EA Y+KFL++QV+ L P
Sbjct: 315 ----RKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVP 362
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 375 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 431
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+ Q++ +
Sbjct: 325 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 374
>gi|79465433|ref|NP_192426.2| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|332657087|gb|AEE82487.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 238
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K R+ T + + R+E++ +RI LQ+LV K DTAS+L+EA Y+KFL+ QV
Sbjct: 99 KRPRLETLSPLPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTV 158
Query: 280 LENP 283
L NP
Sbjct: 159 LSNP 162
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 16/84 (19%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN-------- 282
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 132 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLHP 191
Query: 283 ---PGHQKPDHHHSMNYPPTNLAF 303
PG +P M P T ++F
Sbjct: 192 MCLPGVLQP-----MQLPLTGMSF 210
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ +VPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 107 ATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFL 163
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 216 KPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYL 270
KP +VR +TD ++A R RRE+ISER+++LQ L PG +K + A +LDE NY+
Sbjct: 108 KPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEIINYI 167
Query: 271 KFLRSQVKAL 280
+ L+ QV+ L
Sbjct: 168 QSLQRQVEFL 177
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 324 ATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 380
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISER+R LQ LVP K +T+ MLD A +Y+K L+ Q K L
Sbjct: 307 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKIL 363
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+I ER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 308 ATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQV 277
R +T P+++A R+RR RIS+R+R LQ LVP K +T+ MLD A +Y+K L+ Q+
Sbjct: 296 RAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQI 355
Query: 278 KALE 281
+ L+
Sbjct: 356 EKLK 359
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ +VPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 107 ATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFL 163
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+IS+R++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 360 ATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 416
>gi|356565449|ref|XP_003550952.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 324
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
+A R+RRE++S+R L +VPG KMD A++L++A Y+K L+ +VK LE
Sbjct: 155 VIAERKRREKLSQRFIALSAIVPGLKKMDKATVLEDAIKYVKQLQERVKTLE 206
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD +A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 158 ATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 214
>gi|147788047|emb|CAN78236.1| hypothetical protein VITISV_016390 [Vitis vinifera]
Length = 477
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 232 AARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP 283
A + R+E++ +RI LQ+LV K DTAS+L EA Y+KFL QV AL P
Sbjct: 360 AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSALSTP 411
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 153 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 202
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+ Q++ +
Sbjct: 325 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 374
>gi|3127045|gb|AAC39455.1| bHLH transcription factor JAF13 [Petunia x hybrida]
Length = 628
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 229 QTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKP 288
+ ++ R+RRE+I+ER +L ++P G K+D S+LDE YLK L +V+ LE ++P
Sbjct: 439 RVISERRRREKINERFMLLASMLPAGGKVDKISLLDETIEYLKELERRVQDLEAKSGRRP 498
Query: 289 D 289
+
Sbjct: 499 N 499
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 260 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 316
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R+RR RIS RI+ LQ L P K TA MLD A Y+K L+ QVK L +
Sbjct: 366 FATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQVKILRD 425
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALE-- 281
+TD ++A R RRE+IS+R+++LQ LVPG +K + A MLDE NY++ L+ QV+ L
Sbjct: 286 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMK 345
Query: 282 ----NPGHQKPDHHHSMNYPPTNLAFSSLPFNNNSFPVQT 317
NP + D ++ N ++ S P ++ FP++T
Sbjct: 346 LATVNP---QLDFNNLPNLLAKDMHQSCSPLQSSHFPLET 382
>gi|449511629|ref|XP_004164011.1| PREDICTED: transcription factor bHLH110-like [Cucumis sativus]
Length = 427
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 215 EKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
+ P K R+ + + R+E++ +RI LQ+LV K DTAS+L EA Y+KFL+
Sbjct: 291 QSPPLKKSRLDSRASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQ 350
Query: 275 SQVKALENPGHQKP 288
+QV+ L P + KP
Sbjct: 351 NQVETLSVP-YMKP 363
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+IS+R+++LQ LVPG +K + A MLDE NY++ L+ QV+ L
Sbjct: 277 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 333
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+I ER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 306 ATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 362
>gi|323388967|gb|ADX60288.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 321
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
R RRER+ ERI LQ+LV K DTAS+L EA Y++FL QV+ L +P Q+
Sbjct: 159 RVRRERLGERIIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYLQR 212
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 165 MSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 214
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RR++ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 145 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 201
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISER+R LQ LVP K +T+ MLD A +Y+K L+ Q K L
Sbjct: 286 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKIL 342
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 17/100 (17%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN---------PG 284
R+RR+RI+E+++ LQ LVP +K D AS+LDEA YLK L+ QV+ + PG
Sbjct: 153 RRRRDRINEKMKALQELVPHCNKSDKASILDEAIEYLKSLQLQVQIMWMTTGMAPMMFPG 212
Query: 285 -HQ-KPDHHHSMN--YPPTNLAFSSL----PFNNNSFPVQ 316
HQ P +N PT + S L PF NN P Q
Sbjct: 213 AHQLMPQMAMGLNPACMPTAQSLSQLQRVAPFMNNPLPNQ 252
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 81 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 137
>gi|115455479|ref|NP_001051340.1| Os03g0759700 [Oryza sativa Japonica Group]
gi|14488370|gb|AAK63937.1|AC084282_18 putative ethylene-responsive protein [Oryza sativa Japonica Group]
gi|108711199|gb|ABF98994.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711200|gb|ABF98995.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549811|dbj|BAF13254.1| Os03g0759700 [Oryza sativa Japonica Group]
gi|125545792|gb|EAY91931.1| hypothetical protein OsI_13616 [Oryza sativa Indica Group]
gi|125587992|gb|EAZ28656.1| hypothetical protein OsJ_12666 [Oryza sativa Japonica Group]
gi|215706310|dbj|BAG93166.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 317
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQK 287
R RRER+ ERI LQ+LV K DTAS+L EA Y++FL QV+ L +P Q+
Sbjct: 159 RVRRERLGERIIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYLQR 212
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+ +LQ LVPG +++ A MLDE NY++ L+ QV+ L
Sbjct: 201 ATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFL 257
>gi|115483366|ref|NP_001065353.1| Os10g0556200 [Oryza sativa Japonica Group]
gi|14165335|gb|AAK55467.1|AC069300_22 putative DNA-binding protein [Oryza sativa Japonica Group]
gi|31433458|gb|AAP54971.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113639885|dbj|BAF27190.1| Os10g0556200 [Oryza sativa Japonica Group]
Length = 191
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 36/45 (80%)
Query: 235 QRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
+RR+RI+++++ LQ+LVP SK D ASMLDE +YLK L++QV+
Sbjct: 12 KRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQV 56
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RR++ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 154 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 210
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RR++ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 147 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 203
>gi|449468842|ref|XP_004152130.1| PREDICTED: transcription factor bHLH113-like [Cucumis sativus]
gi|449484720|ref|XP_004156961.1| PREDICTED: transcription factor bHLH113-like [Cucumis sativus]
Length = 167
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 217 PKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQ 276
PKR S +++++R++++ ERI LQ+LV K DTAS+L EA Y++FL Q
Sbjct: 43 PKRHKTDFS-----ISSKERKDKLGERIMALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ 97
Query: 277 VKALENPGHQ 286
VK L P Q
Sbjct: 98 VKVLSAPYLQ 107
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P++VA R RR RISE+I+ L+ L P K TA MLD A Y+K L+ QVK L
Sbjct: 173 FATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQVKTL 230
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
E PK+ + + +TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 178
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 179 NYIQSLQRQVEFL 191
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQV 277
R +T P+++A R+RR RIS+R+R LQ LVP K +T+ MLD A +Y+K L+ Q+
Sbjct: 301 RAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQI 360
Query: 278 KALE 281
+ L+
Sbjct: 361 EKLK 364
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 218 KRKNVRISTDPQ--TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+R +++ + D Q ++ ++RR +I+E+++ LQ+L+P +K D ASMLDEA YLK L+
Sbjct: 81 QRNSLKRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQL 140
Query: 276 QVKAL 280
QV+ L
Sbjct: 141 QVQTL 145
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISER+R LQ LVP K +T+ MLD A +Y+K L+ QV+ L
Sbjct: 346 ATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQVETL 402
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+ +LQ LVPG +++ A MLDE NY++ L+ QV+ L
Sbjct: 198 ATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFL 254
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R+RR RIS RI+ LQ L P K TA MLD A Y+K L+ QVK L +
Sbjct: 362 FATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQVKMLRD 421
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ LVP +K D AS+LDEA YLK L+ QV+ +
Sbjct: 258 RRRRDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 304
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG K+ A MLDE +Y++ L++QV+ L
Sbjct: 187 ATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFL 243
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAA 267
++PK + + + +T+ ++A R RRE+ISER++ LQ LVPG SK+ A MLDE
Sbjct: 141 DQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 200
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 201 NYVQSLQRQVEFL 213
>gi|359493921|ref|XP_002280367.2| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
Length = 361
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 232 AARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP 283
A + R+E++ +RI LQ+LV K DTAS+L EA Y+KFL QV AL P
Sbjct: 249 AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSALSTP 300
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K D AS+LDEA YLK L+ QV+ +
Sbjct: 216 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVM 262
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 151 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 200
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 266 ATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFL 322
>gi|225442565|ref|XP_002284327.1| PREDICTED: transcription factor bHLH68-like isoform 1 [Vitis
vinifera]
Length = 330
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K R+ P + R+E++ +RI L +LV K DTAS+L EA Y++FL+ Q++A
Sbjct: 179 KKARVQPSPSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEA 238
Query: 280 LENP 283
L +P
Sbjct: 239 LSSP 242
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K D ASMLDEA YLK L+ Q++ +
Sbjct: 306 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 355
>gi|3193326|gb|AAC19308.1| contains similarity to transcriptional activators such as Ra-like
and myc-like regulatory R proteins [Arabidopsis
thaliana]
gi|7267092|emb|CAB80763.1| putative transcriptional regulator [Arabidopsis thaliana]
Length = 329
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 235 QRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+RR++I++R++ LQ+LVP SK D ASMLDE YLK L++QV +
Sbjct: 154 KRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 199
>gi|297743242|emb|CBI36109.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K R+ P + R+E++ +RI L +LV K DTAS+L EA Y++FL+ Q++A
Sbjct: 178 KKARVQPSPSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEA 237
Query: 280 LENP 283
L +P
Sbjct: 238 LSSP 241
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RR++ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 153 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 209
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR+RI+E++R LQ L+P +K D AS+LDEA YLK L+ QV+ +
Sbjct: 207 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVM 253
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQV 277
R +T P+++A R RR +ISERIR LQ LVP K +T+ MLD A +Y+K L+ QV
Sbjct: 325 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQV 384
Query: 278 KALEN 282
K + +
Sbjct: 385 KVMND 389
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 19/145 (13%)
Query: 149 NPPKAKKPRL-DKRPSSANINFQ--LQASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFR 205
+PP+ P D P+S + F S SS S++ P + R
Sbjct: 75 DPPRPGWPATSDVSPTSQGVGFGGVWAMSEASSGPSTVRHPWAGGVR------LRVNGVL 128
Query: 206 PVNLGLEVVEK---PKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSK 256
P + G +V +K PK+ + + +TD ++A R RRE+IS R++ LQ LVPG S+
Sbjct: 129 PGHSGKKVKKKEQPPKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSE 188
Query: 257 M-DTASMLDEAANYLKFLRSQVKAL 280
+ A ML+E NY+K L+ Q++ L
Sbjct: 189 VTGKAVMLEEIINYVKSLQRQIEFL 213
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+IS+R+++LQ LVPG +K + A MLDE NY++ L+ QV+ L
Sbjct: 271 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 327
>gi|302143168|emb|CBI20463.3| unnamed protein product [Vitis vinifera]
Length = 384
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 232 AARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP 283
A + R+E++ +RI LQ+LV K DTAS+L EA Y+KFL QV AL P
Sbjct: 272 AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSALSTP 323
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 215 EKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
++P K + + ++ R+RR+RI+E++R LQ LVP +K D AS+LDEA YLK L+
Sbjct: 319 KRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQ 378
Query: 275 SQVKAL 280
QV+ +
Sbjct: 379 MQVQIM 384
>gi|356546916|ref|XP_003541866.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
Length = 460
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 232 AARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP 283
A + R+E++ +RI LQ+LV K DTAS+L EA Y+KFL QV AL P
Sbjct: 348 AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTALSTP 399
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+IS+R+++LQ LVPG +K + A MLDE NY++ L+ QV+ L
Sbjct: 271 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 327
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 219 RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQV 277
R +T P+++A R RR +ISERIR LQ LVP K +T+ MLD A +Y+K L+ QV
Sbjct: 328 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQV 387
Query: 278 KALEN 282
K + +
Sbjct: 388 KVMND 392
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG K+ A MLDE +Y++ L++QV+ L
Sbjct: 187 ATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFL 243
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 183 ATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFL 239
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVK 278
+TD ++A R RRE+I ER+++LQ LVPG SK+ A MLDE NY++ L+ QV+
Sbjct: 263 ATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 317
>gi|125605938|gb|EAZ44974.1| hypothetical protein OsJ_29617 [Oryza sativa Japonica Group]
Length = 287
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 54/81 (66%), Gaps = 8/81 (9%)
Query: 173 ASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVA 232
A SS SSS E M+EMI+ AA +PV + E V PKR+NVRIS DPQ+VA
Sbjct: 104 APQGSSSSSSSEA--------MREMIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVA 155
Query: 233 ARQRRERISERIRVLQRLVPG 253
AR RRERISERIR+LQR PG
Sbjct: 156 ARLRRERISERIRILQRPRPG 176
>gi|90265171|emb|CAH67739.1| H0522A01.10 [Oryza sativa Indica Group]
gi|116634833|emb|CAH67283.1| OSIGBa0103O01.1 [Oryza sativa Indica Group]
gi|125548865|gb|EAY94687.1| hypothetical protein OsI_16465 [Oryza sativa Indica Group]
Length = 156
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 209 LGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAAN 268
G +KP+ N R + V+ ++++++I ER+ LQ+LV K DTAS+L EA+
Sbjct: 32 FGSMTSKKPRNTNPRDAP----VSPKEKKDKIGERVAALQQLVSPFGKTDTASVLQEASG 87
Query: 269 YLKFLRSQVKALENPGHQKP 288
Y+KFL Q++ L +P + P
Sbjct: 88 YIKFLHQQLEVLSSPYMRAP 107
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RR++ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 113 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 169
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISERI+ LQ L P K TA ML+ A Y+K L+ QVK L
Sbjct: 348 CATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQVKTL 405
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISERI+ LQ L P K TA MLD A Y+K L+ +VK L +
Sbjct: 372 FATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQKVKILSD 431
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 218 KRKNVRISTDPQ--TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
+R +++ + D Q ++ ++RR +I+E+++ LQ+L+P +K D ASMLDEA Y+K L+
Sbjct: 84 QRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQLQL 143
Query: 276 QVKAL 280
QV+ L
Sbjct: 144 QVQTL 148
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 89 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 145
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 146 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 195
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>gi|212721174|ref|NP_001132848.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194695568|gb|ACF81868.1| unknown [Zea mays]
gi|414586588|tpg|DAA37159.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414586589|tpg|DAA37160.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 167
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 215 EKPKRKNVRISTDPQT--VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
+KP+ +N S P+T V+ +++++RI ER+ LQ+LV K DTAS+L EA+ Y++F
Sbjct: 46 KKPRPRN---SNSPRTAPVSPKEKKDRIGERVAALQQLVSPFGKTDTASVLQEASGYIRF 102
Query: 273 LRSQVKALENP 283
L Q++ L +P
Sbjct: 103 LHQQLQVLSSP 113
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RR++ISER+++LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 38 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 94
>gi|168011109|ref|XP_001758246.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690702|gb|EDQ77068.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 418
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 226 TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
T +A R+RRE++S+R L +VPG KMD AS+L +A Y+K L ++KALE
Sbjct: 227 TQDHIMAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYVKTLEEKLKALE 282
>gi|356511998|ref|XP_003524708.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 336
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%)
Query: 226 TDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGH 285
T +A R RRE+IS++ L L+P KMD S+L EA Y+K L+ QVK LE
Sbjct: 147 TQDHIIAERMRREKISQQFIALSALIPDLKKMDKVSLLGEAIRYVKQLKEQVKLLEEQSK 206
Query: 286 QK 287
+K
Sbjct: 207 RK 208
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ +VPG +K+ A +LDE NY++ L+ QV+ L
Sbjct: 148 ATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVEFL 204
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISER+R LQ LVP K +TA MLD A Y+K L+ Q L +
Sbjct: 327 CATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQYNTLTD 386
Query: 283 -------PGHQKP 288
G QKP
Sbjct: 387 NRAHCKCLGKQKP 399
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRERI ER+++LQ LVPG +K + A LDE NY++ L+ QV+ L
Sbjct: 150 ATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVEFL 206
>gi|297735856|emb|CBI18610.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
+A R+RRE++S+R L LVPG KMD AS+L +A YLK L+ +VK+LE
Sbjct: 12 IMAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYLKQLQERVKSLE 63
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
S + ++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 197 SAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 252
>gi|356527951|ref|XP_003532569.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
Length = 501
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 214 VEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFL 273
V +P K RI T + R+E++ +R+ LQ+LV K DTAS+L EA Y+KFL
Sbjct: 368 VCEPALKRPRIETSSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFL 427
Query: 274 RSQVKAL 280
QV L
Sbjct: 428 HDQVNVL 434
>gi|357475557|ref|XP_003608064.1| Transcription factor bHLH [Medicago truncatula]
gi|355509119|gb|AES90261.1| Transcription factor bHLH [Medicago truncatula]
Length = 165
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP 283
+++ + R+E+I ERI LQ+LV K DT+S+L EA +Y+ FL QVK L P
Sbjct: 52 SISTKDRKEKIGERIVALQQLVSPYGKTDTSSVLKEAMDYIGFLHKQVKLLSAP 105
>gi|356527979|ref|XP_003532583.1| PREDICTED: uncharacterized protein LOC100776455 [Glycine max]
Length = 191
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
+A R+RRE++S+R L LVPG K D AS+L +A YLK L +VKALE
Sbjct: 129 IAERKRREKLSQRFIALSALVPGLQKTDKASVLGDAIKYLKQLPEKVKALE 179
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
S + ++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 197 SAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 252
>gi|255588215|ref|XP_002534538.1| transcription factor, putative [Ricinus communis]
gi|223525089|gb|EEF27845.1| transcription factor, putative [Ricinus communis]
Length = 119
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQ 286
+++ ++R+E++ ERI LQ+LV K DTAS+L EA Y++FL QVK L P Q
Sbjct: 9 SISTKERKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIRFLHEQVKVLSAPYLQ 65
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 216 KPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYL 270
KP +VR +TD ++A R RRE+IS++++ LQ LVPG +K+ A MLDE NY+
Sbjct: 184 KPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYV 243
Query: 271 KFLRSQVKAL 280
+ L+ QV+ L
Sbjct: 244 QSLQRQVEFL 253
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
S D + R+RR+RI+E+++ LQ L+P +K D SMLDEA +YLK L+ Q++ L
Sbjct: 21 SADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 76
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 163 LSEKRRRNRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKKLQLQVQML 212
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 224 ISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR RISER+R LQ LVP K +TA MLD A Y+K L+ Q L +
Sbjct: 316 CATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQYNTLTD 375
Query: 283 -------PGHQKP 288
G QKP
Sbjct: 376 NRAHCKCLGKQKP 388
>gi|168042679|ref|XP_001773815.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674930|gb|EDQ61432.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 418
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
+A R+RRE++++R L+ L+P SKMD AS+L A Y+K L+SQ++ALEN
Sbjct: 214 VLAERRRREKLNDRFVALRELIPNVSKMDKASILGVAIEYVKELQSQLRALEN 266
>gi|302802899|ref|XP_002983203.1| hypothetical protein SELMODRAFT_445453 [Selaginella moellendorffii]
gi|300148888|gb|EFJ15545.1| hypothetical protein SELMODRAFT_445453 [Selaginella moellendorffii]
Length = 277
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
+QR+ERI + ++ LQ +VPGG MD A +LDEA Y+K L+ +V+ LE
Sbjct: 217 KQRKERIRQTVKALQSIVPGGDSMDPAIVLDEAILYMKVLQMRVRQLET 265
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 13/91 (14%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDH 290
+A R+RRE+I+E I+ LQ L+P +K S LD+A Y+K+L+SQ++ + P
Sbjct: 591 LAERRRREKINENIKTLQELIPRCNKSTKVSTLDDAIEYVKWLQSQIQMMSTGQGMMPPM 650
Query: 291 HHS-------------MNYPPTNLAFSSLPF 308
++ MN PP + F PF
Sbjct: 651 MYAGNTQQFMPHMAMDMNRPPPFIPFPDTPF 681
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+A R+RRE+I+E+++ LQ L+P +K S LD A Y+K+L+SQ++ +
Sbjct: 145 LAERRRREKINEKMKTLQELIPRCNKSTKVSTLDAAIEYVKWLQSQIQMI 194
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL---------- 280
+A R+RRE+I+E+++ LQ L+P +K S L++ Y+K L+ Q++ +
Sbjct: 1149 LAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDVIEYMKSLQMQIQMMSMGHGMMPPM 1208
Query: 281 ---ENPGHQKPDHHHSMNYPPTNLAFSSLPFNNNSFPVQTHFSLQNPNH 326
EN P MN PP + F +FP H + P++
Sbjct: 1209 MNAENMQQFMPHMAMGMNRPPPFIHFP-----GTAFPRPGHMAGVGPSY 1252
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 12/66 (18%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDH 290
+A R+RRE+I+E+++ LQ L+P +K S L++ Y+K L Q++
Sbjct: 1579 LAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDVIEYVKSLEMQIQ------------ 1626
Query: 291 HHSMNY 296
H+ MN+
Sbjct: 1627 HYVMNF 1632
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 214 VEKPK-----RKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAA 267
+EKPK R +TD ++A R RRERI+E++R LQ LVPG K M A MLD
Sbjct: 112 LEKPKEVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVII 171
Query: 268 NYLKFLRSQVKA 279
NY++ L++Q++
Sbjct: 172 NYVQSLQNQIEV 183
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER++ LQ LVPG SK+ A MLDE NY++ L+ QV+ L
Sbjct: 83 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 139
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKALEN 282
+T P+++A R RR +ISER+R LQ LVP K +T+ MLD A Y+K L+ QV+ L +
Sbjct: 366 ATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQVQTLSD 424
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 65 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 121
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.126 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,144,814,064
Number of Sequences: 23463169
Number of extensions: 211475758
Number of successful extensions: 684911
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2660
Number of HSP's successfully gapped in prelim test: 603
Number of HSP's that attempted gapping in prelim test: 672159
Number of HSP's gapped (non-prelim): 10031
length of query: 330
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 188
effective length of database: 9,027,425,369
effective search space: 1697155969372
effective search space used: 1697155969372
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 77 (34.3 bits)