BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020172
(330 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 274 bits (700), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 180/340 (52%), Positives = 207/340 (60%), Gaps = 48/340 (14%)
Query: 1 MADQSQVANKAVGVSTTTCSLESLDCLLSATNSNSAETSAEDDDGISILFSSDCRNLWNF 60
+ Q V N+A + + SLDCLLSAT SNS TS EDD+GIS+LFS DC+ LW+F
Sbjct: 70 IQQQQHVGNRASSIDPS-----SLDCLLSAT-SNSNNTSTEDDEGISVLFS-DCQTLWSF 122
Query: 61 GSNSSAVSSGESENNAPNNFARNNNGPVNNELDHETISHCSSVQYVNNGRIVHQEELRPG 120
G VSS ESEN P + + + +P
Sbjct: 123 G----GVSSAESENREITTETTTTIKPKPLKRNRGGDGGTTETTTTTT---------KPK 169
Query: 121 STKRKNIDDHQSEQFHLF------QGGGFKLI-SENPPKAKKPRLDK-RPSSANINFQLQ 172
S KR N D F L + GGFKLI EN K+KKPR +K R S+NI+FQ
Sbjct: 170 SLKR-NRGDETGSHFSLVHPQDDSEKGGFKLIYDENQSKSKKPRTEKERGGSSNISFQ-- 226
Query: 173 ASNNSSVSSSIEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVA 232
+S+ S EPD EAIA MKEMIYRAAAFRPVN GLE+VEKPKRKNV+ISTDPQTVA
Sbjct: 227 ---HSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVA 283
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENPGHQKPDHHH 292
ARQRRERISE+IRVLQ LVPGG+KMDTASMLDEAANYLKFLR+QVKALEN K D
Sbjct: 284 ARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENL-RPKLDQ-- 340
Query: 293 SMNYPPTNLAFSSLPFNNNSFPV--QTHFSLQNPNHIHRP 330
TNL+FSS P SFP+ + LQNPN IH P
Sbjct: 341 ------TNLSFSSAP---TSFPLFHPSFLPLQNPNQIHHP 371
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 76/110 (69%), Gaps = 13/110 (11%)
Query: 185 EPDPEAIAH-------------MKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTV 231
+P PE + H MKEM Y A +PV++ V KP R+NVRIS DPQTV
Sbjct: 66 DPPPETLIHLDEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTV 125
Query: 232 AARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
AR+RRERISE+IR+L+R+VPGG+KMDTASMLDEA Y KFL+ QV+ L+
Sbjct: 126 VARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
>sp|Q9FHA7|HEC1_ARATH Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1
Length = 241
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 79/91 (86%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+A M+EMI+R A +P+++ E V+ PKR+NVRIS DPQ+VAAR RRERISERIR+LQRL
Sbjct: 95 MAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRL 154
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
VPGG+KMDTASMLDEA +Y+KFL+ QV++LE
Sbjct: 155 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 185
>sp|Q9SND4|HEC2_ARATH Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1
Length = 231
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 79/91 (86%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+A M+EMI+R A +P+++ E V+ PKRKNVRIS DPQ+VAAR RRERISERIR+LQRL
Sbjct: 92 MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 151
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
VPGG+KMDTASMLDEA +Y+KFL+ QV++LE
Sbjct: 152 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182
>sp|Q9LXD8|HEC3_ARATH Transcription factor HEC3 OS=Arabidopsis thaliana GN=HEC3 PE=1 SV=1
Length = 224
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 76/92 (82%)
Query: 191 IAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRL 250
+ MKEM+Y+ AA + V++ V+KPKR+NVRIS DPQ+VAAR RRERISERIR+LQRL
Sbjct: 92 LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151
Query: 251 VPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
VPGG+KMDTASMLDEA Y+KFL+ Q++ L N
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLNN 183
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
K R +STDPQ+VAAR RR RIS+R ++LQ +VPGG+KMDT SMLDEA +Y+KFL++
Sbjct: 35 KRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKA 94
Query: 276 QVKALENPGHQKPDHH--HSMNYPPTNLAFSS--LPFNNNSFPVQTHFSLQNP 324
Q+ +N DH S Y P F ++++ P+ +S P
Sbjct: 95 QIWYHQNMLLFINDHETTSSCTYSPGAGEFGPKLFGYDDDYAPIMDTYSQGVP 147
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 50/55 (90%)
Query: 223 RISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQV 277
++STDPQ+VAAR+RR RIS+R RVL+ LVPGGSKMDT SML++A +Y+KFL++QV
Sbjct: 39 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 93
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 49/56 (87%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA +Y+KFL+ Q+K L
Sbjct: 273 ATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDPQ++ AR+RRERI+ER+R+LQ LVP G+K+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 244 ATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 50/68 (73%)
Query: 213 VVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKF 272
V K K K DPQ++AA+ RRERISER+++LQ LVP G+K+D +ML++A +Y+KF
Sbjct: 190 VTGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKF 249
Query: 273 LRSQVKAL 280
L+ QVK L
Sbjct: 250 LQVQVKVL 257
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 214 VEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFL 273
+++ + N I++DPQ++ AR+RRERI++R++ LQ LVP G+K+D ++ML++A +Y+KFL
Sbjct: 128 LKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFL 187
Query: 274 RSQVKAL--ENPGHQKPDHHHSMN 295
+ Q+K L E+ P H+ +N
Sbjct: 188 QLQIKLLSSEDLWMYAPLAHNGLN 211
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
K K K DPQ++AA+ RRERISER++VLQ LVP G+K+D +ML++A Y+KFL+
Sbjct: 199 KIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQV 258
Query: 276 QVKAL 280
QVK L
Sbjct: 259 QVKVL 263
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 216 KPKRKNVR-ISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLR 274
KPK + R +TDP ++A R RRERI+ER++ LQ LVP G+K D ASMLDE +Y+KFL+
Sbjct: 127 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 186
Query: 275 SQVKAL 280
QVK L
Sbjct: 187 LQVKVL 192
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 51/67 (76%)
Query: 214 VEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFL 273
V+ R +TDPQ++ AR+RRE+I+ER++ LQ LVP G+K+D ++ML+EA +Y+KFL
Sbjct: 163 VKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFL 222
Query: 274 RSQVKAL 280
+ Q+K L
Sbjct: 223 QLQIKLL 229
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ER++ LQ LVP G+K D ASMLDE +Y+KFL+ QVK L
Sbjct: 145 ATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 213 VVEKPKRKNVRI-STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLK 271
V +KP+ + R +TDP ++A R RRERI+ER++ LQ LVP +K D ASMLDE Y++
Sbjct: 93 VRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVR 152
Query: 272 FLRSQVKAL 280
FL+ QVK L
Sbjct: 153 FLQLQVKVL 161
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+R LQ LVPG K+ A MLDE NY++ L++QV+ L
Sbjct: 143 ATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFL 199
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
PE=1 SV=1
Length = 379
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPG-GSKMDTASMLDEAANYLKFLRSQVKALE 281
+T P+++A R RR +ISER+R LQ LVP ++ +TA MLD A Y+K L+ QVKALE
Sbjct: 311 ATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALE 368
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ R+RR+RI+E++R LQ L+P +K+D ASMLDEA YLK L+ QV+ +
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 16/112 (14%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL---------E 281
++ R+RR+RI+ER++ LQ L+P +K D ASMLDEA Y+K L+ Q++ +
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMM 350
Query: 282 NPGHQKPDHHHSMNY-------PPTNLAFSSLPFNNNSFPVQTHFSLQNPNH 326
PG Q+ H +M PP+ + F ++ P QTH + P +
Sbjct: 351 YPGMQQYMPHMAMGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQY 402
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP----GHQ 286
+A R+RRE+I+E+++ LQ+L+P +K S LD+A Y+K L+SQ++ + +P G+
Sbjct: 262 LAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGMMSPMMNAGNT 321
Query: 287 K---PDHHHSMNYPPTNLAFSSLPFNNNSFPVQTHFSLQNPNH 326
+ P MN PP +PF SFP+ + P++
Sbjct: 322 QQFMPHMAMDMNRPP-----PFIPFPGTSFPMPAQMAGVGPSY 359
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RIS+RIR LQ LVP K +TA ML+EA Y+K L+SQ++ L
Sbjct: 188 ATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQEL 244
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 234 RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
R+RR++I++R++ LQ+LVP SK D ASMLDE YLK L++QV +
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>sp|Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113
PE=2 SV=1
Length = 270
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 216 KPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRS 275
KP +K R A+ R+ER+ ERI LQ+LV K D AS+L EA Y+KFL+
Sbjct: 136 KPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQD 195
Query: 276 QVKALENP 283
Q++ L +P
Sbjct: 196 QIQVLCSP 203
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER++ LQ LVPG K+ A MLDE NY++ L+ Q++ L
Sbjct: 179 ATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>sp|Q8GXT3|BH123_ARATH Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123
PE=2 SV=1
Length = 454
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Query: 233 ARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENP--------G 284
A +R+E++ +RI LQ+LV K D AS+L EA Y+KFL QV AL NP
Sbjct: 343 AFKRKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQ 402
Query: 285 HQKPDH 290
HQ+ DH
Sbjct: 403 HQQSDH 408
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 265 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 215 EKPKRKNVRI------STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAA 267
E PK + + +T+ ++A R RRE+ISER+R+LQ LVPG +K+ A MLDE
Sbjct: 197 EAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 256
Query: 268 NYLKFLRSQVKAL 280
NY++ L+ QV+ L
Sbjct: 257 NYVQSLQQQVEFL 269
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RIS+RIR LQ LVP K +TA ML+EA Y+K L+ Q++ L
Sbjct: 191 ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQEL 247
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RR +I+ER+R LQ +VPG K M A+MLDE NY++ L++QV+ L
Sbjct: 152 ATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 208
>sp|Q9M0X8|BH114_ARATH Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114
PE=2 SV=2
Length = 298
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K R+ T + + R+E++ +RI LQ+LV K DTAS+L+EA Y+KFL+ QV
Sbjct: 159 KRPRLETLSPLPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTV 218
Query: 280 LENP 283
L NP
Sbjct: 219 LSNP 222
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+++LQ LVPG +K + A +LDE NY++ L+ QV+ L
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RR +I+ER++ LQ +VPG K M A+MLDE NY++ L++QV+ L
Sbjct: 154 ATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 210
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR +I+E+++ LQ+L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 214 VEKPKRKNVRI----STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAAN 268
++KP +VR +TD ++A R RRE+IS++++ LQ +VPG +K+ A MLDE N
Sbjct: 133 IQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIIN 192
Query: 269 YLKFLRSQVKAL 280
Y++ L+ QV+ L
Sbjct: 193 YVQSLQQQVEFL 204
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+I ER+++LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 308 ATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+T P+++A R RR RISER+R LQ LVP K +T+ MLD A +Y+K L+ Q K L
Sbjct: 286 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKIL 342
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+ISER+ +LQ LVPG +++ A MLDE NY++ L+ QV+ L
Sbjct: 198 ATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFL 254
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 231 VAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
++ ++RR RI+E+++ LQ L+P +K D ASMLDEA YLK L+ QV+ L
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER++ LQ LVPG K+ A MLDE NY++ L+ Q++ L
Sbjct: 230 ATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFL 286
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+T+ ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 310 ATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+I+ER++ LQ LVPG K M A MLD +Y++ L++Q++ L
Sbjct: 111 ATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFL 167
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 232 AARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALEN 282
A RQRRE++++R L+ +VP SKMD AS+L +A +Y+K L+ +VK +E+
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMED 449
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKM-DTASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+IS++++ LQ +VPG +K+ A MLDE NY++ L+ QV+ L
Sbjct: 192 ATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 248
>sp|Q9SFZ3|BH110_ARATH Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110
PE=2 SV=2
Length = 453
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 220 KNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKA 279
K R+ + + R+E++ +RI LQ+LV K DTAS+L EA Y+KFL+SQ++
Sbjct: 318 KKPRVESRSSCPPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIET 377
Query: 280 LENP 283
L P
Sbjct: 378 LSVP 381
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 230 TVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALE 281
+A R+RRE++++R L LVPG KMD AS+L +A ++K+L+ +V LE
Sbjct: 154 IIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELE 205
>sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2
SV=2
Length = 407
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 220 KNVRISTDPQTVAA-RQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVK 278
K R+ P + + + R+E++ RI L +LV K DTAS+L EA Y++FL+SQ++
Sbjct: 248 KKPRLQPSPSSQSTLKVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIE 307
Query: 279 ALENP 283
AL +P
Sbjct: 308 ALSHP 312
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMD-TASMLDEAANYLKFLRSQVKAL 280
+TD ++A R RRE+I+ R+++LQ LVPG K+ TA +LDE N+++ L+ QV+ L
Sbjct: 192 ATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEML 248
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 13/94 (13%)
Query: 200 RAAAFRPVNLGLEVVEKPK---------RKNVRI----STDPQTVAARQRRERISERIRV 246
R ++ +PV G + + P R VR +TDP ++A R RRERI+ERIR
Sbjct: 115 RCSSMKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRA 174
Query: 247 LQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
LQ LVP +K D A+M+DE +Y+KFLR QVK L
Sbjct: 175 LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVL 208
>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
SV=1
Length = 302
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 225 STDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 280
+TDP ++A R RRERI+ERIR LQ LVP +K D A+M+DE +Y+KFLR QVK L
Sbjct: 151 ATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVL 206
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.126 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,617,732
Number of Sequences: 539616
Number of extensions: 5118986
Number of successful extensions: 37042
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 255
Number of HSP's that attempted gapping in prelim test: 23937
Number of HSP's gapped (non-prelim): 8107
length of query: 330
length of database: 191,569,459
effective HSP length: 118
effective length of query: 212
effective length of database: 127,894,771
effective search space: 27113691452
effective search space used: 27113691452
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)