BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020173
(330 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 151/320 (47%), Gaps = 67/320 (20%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G +++IRE++ A I I++ S + ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG-----------SCPERITTIT 66
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVA--ANTIRLLIAGSQAGCLIGMSGQNIEK 167
+ A+ ++I D + A+ G V+ T+RL+I SQ G LIG +G I++
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPR-QVI 226
+R ++GA + + A + LP + ++R V +SG A++ + +I + E+PP+ I
Sbjct: 127 IRETTGAQVQV-AGDLLP-----NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 227 SISPAYN-----------------YSAIRPAQ------------PFVEPT-------SAD 250
P+ + Y A+ PA+ PF P+ S
Sbjct: 181 PYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGMDPSTQ 240
Query: 251 YVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYG---GKGEQKHRHIQFGGSAQQ 307
+ E L+ L+G +IGR GS IS IR SGA IK+ G GE RH+ GS
Sbjct: 241 TSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGE---RHVTITGSPVS 297
Query: 308 VALAKQRVDEYIYSQLIQQA 327
+ALA +Y+ + ++ A
Sbjct: 298 IALA-----QYLITACLETA 312
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 151/320 (47%), Gaps = 67/320 (20%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G +++IRE++ A I I++ S + ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG-----------SCPERITTIT 66
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVA--ANTIRLLIAGSQAGCLIGMSGQNIEK 167
+ A+ ++I D + A+ G+V+ T+RL+I SQ G LIG +G I++
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPR-QVI 226
+R ++GA + + A + LP + ++R V +SG A++ + +I + E+PP+ I
Sbjct: 127 IRETTGAQVQV-AGDLLP-----NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 227 SISPAYN-----------------YSAIRPAQ------------PFVEPT-------SAD 250
P+ + Y + PA+ PF P+ S
Sbjct: 181 PYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFASPSMVPGLDPSTQ 240
Query: 251 YVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYG---GKGEQKHRHIQFGGSAQQ 307
+ E L+ L+G +IGR GS IS IR SGA IK+ G GE RH+ GS
Sbjct: 241 TSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGE---RHVTITGSPVS 297
Query: 308 VALAKQRVDEYIYSQLIQQA 327
+ALA +Y+ + ++ A
Sbjct: 298 IALA-----QYLITACLETA 312
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 245 EPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHIQFGGS 304
EP + +T ML+ VG +IG+ G + RIR +S A I + G ++ I +
Sbjct: 11 EPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTA 70
Query: 305 A--QQVALAKQRVDE 317
A V++ ++DE
Sbjct: 71 AVFHAVSMIAFKLDE 85
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 151/320 (47%), Gaps = 67/320 (20%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G +++IRE++ A I I++ S + ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG-----------SCPERITTIT 66
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVA--ANTIRLLIAGSQAGCLIGMSGQNIEK 167
+ A+ ++I D + A+ G+V+ T+RL+I SQ G LIG +G I++
Sbjct: 67 GSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPR-QVI 226
+R ++GA + + A + LP + ++R V +SG A++ + +I + E+PP+ I
Sbjct: 127 IRETTGAQVQV-AGDLLP-----NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 227 SISPAYN-----------------YSAIRPAQ------------PFVEPT-------SAD 250
P+ + Y A+ PA+ PF P+
Sbjct: 181 PYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQ 240
Query: 251 YVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYG---GKGEQKHRHIQFGGSAQQ 307
+ E L+ L+G +IGR GS IS IR SGA IK+ G GE RH+ GS
Sbjct: 241 TSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGE---RHVTITGSPVS 297
Query: 308 VALAKQRVDEYIYSQLIQQA 327
+ALA +Y+ + ++ A
Sbjct: 298 IALA-----QYLITACLETA 312
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 245 EPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHIQFGGS 304
EP + +T ML+ VG +IG+ G + RIR +S A I + G ++ I +
Sbjct: 11 EPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTA 70
Query: 305 A--QQVALAKQRVDE 317
A V++ ++DE
Sbjct: 71 AVFHAVSMIAFKLDE 85
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 150/322 (46%), Gaps = 68/322 (21%)
Query: 45 AKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIAR--HEERVIIISSK 102
+++++++F+++ P I +VIGK G I++IRE + + I++ D+ + +E VII+++
Sbjct: 307 SRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTAT 366
Query: 103 DNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSG 162
++ D ++ A L+L++ ++ +A V ++LL++ GC+IG SG
Sbjct: 367 ES----PDDMKSMAVEAVLLLQEYINDEDAENV--------KMQLLVSSKVIGCVIGKSG 414
Query: 163 QNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLREN-- 220
I ++R + A I C S + D +V++SG+V +V +AL++I +LRE+
Sbjct: 415 SVINEIRKRTNANI----------CISKGKKDDLVEVSGEVSSVRDALIQIVLRLREDVL 464
Query: 221 ----------PPRQ-----------------------VISISPAYNYSAIRPAQPFVEPT 247
PP + + S S + Y + PA V +
Sbjct: 465 GDKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFMSSMASTSGFHGYGSF-PAGDNVLGS 523
Query: 248 SADY--------VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHI 299
+ Y E+LI + ++G+ G N+ IR SGAMI++ K
Sbjct: 524 TGPYSYGRLPSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIA 583
Query: 300 QFGGSAQQVALAKQRVDEYIYS 321
G+ +Q+ A+ V ++ S
Sbjct: 584 LLSGTLEQMRCAENLVQAFVMS 605
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 18/211 (8%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIIS--------- 100
V++RI+ P +G VIGK G I IR TKA IK+ D + +RVI I
Sbjct: 36 VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEE 95
Query: 101 ---SKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCL 157
+K + + A++AL ++ I+ D+ N+ + V RLL+ SQ+ L
Sbjct: 96 IGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDD--NKECRLLVPFSQSSSL 153
Query: 158 IGMSGQNIEKLRNSSGATIVILAPN-QLPLCASAHESDRVVQISGDVPAVLNALVEIGNQ 216
IG +G+NI+++R + A++ +++ + P A E D VV ISG+ +V AL +
Sbjct: 154 IGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAI 213
Query: 217 LRENPPRQVISISPAYNYSAIRPAQPFVEPT 247
+ + PR+ I P + S PA + P+
Sbjct: 214 MYKINPRENI---PLDSTSQDVPAASVIVPS 241
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 146 RLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPA 205
R+L G +IG SG+ I +R+++ A I + +QL C S RV+ I +
Sbjct: 39 RILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVF--DQLHGC-----SQRVITI---YCS 88
Query: 206 VLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSA----DYVTFEMLISES 261
V EIG EN P + Y AI + + D +L+ S
Sbjct: 89 VKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFS 148
Query: 262 LVGGLIGRCGSNISRIRNESGAMIKV 287
LIG+ G NI RIR + A +KV
Sbjct: 149 QSSSLIGKAGENIKRIRRRTRASVKV 174
Score = 31.6 bits (70), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 250 DYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVY 288
+ V + +L +VGG+IG+ G I+ IR+ + A IKV+
Sbjct: 34 ELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVF 72
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 31/271 (11%)
Query: 31 REDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI--ADA 88
RE G G +A+ D RI+VP++ +G +IGKEG I+ I ++T++ + I +
Sbjct: 177 REQGHAPGGT--SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN 234
Query: 89 IARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLL 148
E+ V I ++ + + A + I ++ K+ D A ++ +++L
Sbjct: 235 SGAAEKPVTIHATPEGTS------EACRMILEIMQKEADETKLAEEIP--------LKIL 280
Query: 149 IAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLN 208
G LIG G+N++K+ + +G I I + L S + +R + + G V A +
Sbjct: 281 AHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL----SIYNPERTITVKGTVEACAS 336
Query: 209 ALVEIGNQLRENPPRQVISISPAYNY-SAIRPAQ---PFVEPTSADYVTFE---MLISES 261
A +EI +LRE +++++ Y S++ P PF P Y E + I
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPF--PHHHSYPEQEIVNLFIPTQ 394
Query: 262 LVGGLIGRCGSNISRIRNESGAMIKVYGGKG 292
VG +IG+ G++I ++ +GA IK+ +G
Sbjct: 395 AVGAIIGKKGAHIKQLARFAGASIKIAPAEG 425
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 38 GSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARH-EERV 96
G P + + + + +P++ +G +IGK+G I+++ A+IKIA A ER+
Sbjct: 373 GPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERM 432
Query: 97 IIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGC 156
+II+ A +I + +++ N + H+ + S AG
Sbjct: 433 VIITGPPEAQF-----KAQGRIFGKLKEENFFNPKEEVKLEAHIR-------VPSSTAGR 480
Query: 157 LIGMSGQNIEKLRNSSGATIVI 178
+IG G+ + +L+N + A +++
Sbjct: 481 VIGKGGKTVNELQNLTSAEVIV 502
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 139/327 (42%), Gaps = 75/327 (22%)
Query: 16 VTEPEPRHDVSGKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKI 75
V+ P P H R RE G GS +A+ D RI+VP++ +G +IGKEG I+ I
Sbjct: 160 VSSPSPPH-----RAREQGHGPGSS--SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 212
Query: 76 REETKATIKI--ADAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEAS 133
++T++ + I + E+ V I ++ + + A + I ++ K+ D A
Sbjct: 213 TKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS------EACRMILEIMQKEADETKLAE 266
Query: 134 KVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHES 193
+V +++L G LIG G+N++K+ + +G I I + L S +
Sbjct: 267 EVP--------LKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDL----SIYNP 314
Query: 194 DRVVQISGDVPAVLNALVEIGNQLRENPPRQVISIS------PAYNYSAI---------- 237
+R + + G + A NA +EI +LRE +++++ P N SA+
Sbjct: 315 ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVL 374
Query: 238 -RPAQPFVEPTSADYVTF-------------------------------EMLISESLVGG 265
PA P P S Y F + I VG
Sbjct: 375 PPPAGPRGVPPSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGA 434
Query: 266 LIGRCGSNISRIRNESGAMIKVYGGKG 292
+IG+ G++I ++ +GA IK+ +G
Sbjct: 435 IIGKKGAHIKQLARFAGASIKIAPAEG 461
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARH-EERVIIISSKDNDNVVSDAE 112
+ +P++ +G +IGK+G I+++ A+IKIA A ER++II+
Sbjct: 425 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQF----- 479
Query: 113 NALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSS 172
A +I + +++ N + H+ + S AG +IG G+ + +L+N +
Sbjct: 480 KAQGRIFGKLKEENFFNPKEEVKLEAHIR-------VPSSTAGRVIGKGGKTVNELQNLT 532
Query: 173 GATIVI 178
A +++
Sbjct: 533 SAEVIV 538
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 100/179 (55%), Gaps = 21/179 (11%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G ++K+REE+ A I I++ ER+I ++ N
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN----- 66
Query: 110 DAENALQQIAALI---LKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIE 166
A+ + A+I L++D S+S + AA T+RL++ SQ G LIG G I+
Sbjct: 67 ----AIFKAFAMIIDKLEEDISSSMTNSTAASRPPV-TLRLVVPASQCGSLIGKGGCKIK 121
Query: 167 KLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQV 225
++R S+GA + + A + LP + ++R + I+G +++ + +I + E+PP+ V
Sbjct: 122 EIRESTGAQVQV-AGDMLP-----NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 25/146 (17%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
TIRLL+ G + G +IG G++++K+R SGA I I N C +R++ ++G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN----CP-----ERIITLAGPT 65
Query: 204 PAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLV 263
A+ A I ++L E+ IS S + +A RP VT +++ S
Sbjct: 66 NAIFKAFAMIIDKLEED-----ISSSMTNSTAASRPP-----------VTLRLVVPASQC 109
Query: 264 GGLIGRCGSNISRIRNESGAMIKVYG 289
G LIG+ G I IR +GA ++V G
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQVAG 135
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 248 SADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHIQFGGSAQQ 307
SA + E+ I L+G +IGR G+ I+ IR SGA IK+ R + GSA
Sbjct: 281 SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAAS 340
Query: 308 VALAKQRVDEYIYSQ 322
++LA+ ++ + S+
Sbjct: 341 ISLAQYLINVRLSSE 355
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 35 EIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE 94
E++G A AQ + +P+ IG +IG++G +I +IR+ + A IKIA+ + +
Sbjct: 270 EVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTD 329
Query: 95 RVIIIS 100
R + I+
Sbjct: 330 RQVTIT 335
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHIQFGGSAQQV--- 308
+T +L+ VG +IG+ G ++ ++R ESGA I + +G R I G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLAGPTNAIFKA 71
Query: 309 -ALAKQRVDEYIYSQLIQQAGA 329
A+ +++E I S + A
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAA 93
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 95/174 (54%), Gaps = 15/174 (8%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G ++K+REE+ A I I++ ER++ I+ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGP------T 97
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
DA + A ++D NS ++ A T+RL++ SQ G LIG G I+++R
Sbjct: 98 DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV-TLRLVVPASQCGSLIGKGGSKIKEIR 156
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPR 223
S+GA + + A + LP + ++R V ISG A++ + +I + E+PP+
Sbjct: 157 ESTGAQVQV-AGDMLP-----NSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 75/158 (47%), Gaps = 26/158 (16%)
Query: 133 SKVAAGHVAAN-TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAH 191
SKV+ G + TIRLL+ G + G +IG G+ ++K+R SGA I I N C
Sbjct: 35 SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP--- 87
Query: 192 ESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADY 251
+R+V I+G A+ A I + E+ N + PA TS
Sbjct: 88 --ERIVTITGPTDAIFKAFAMIAYKFEED----------IINSMSNSPA------TSKPP 129
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYG 289
VT +++ S G LIG+ GS I IR +GA ++V G
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG 167
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 119/288 (41%), Gaps = 66/288 (22%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVV 108
V R++VP+ Q G +IGK G +I++IRE T A +++A D + ER + IS D ++
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTP-DAII 188
Query: 109 SDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSG----QN 164
++QI ++L +S + + + A+T ++ AG QA + G
Sbjct: 189 ----QCVKQICVVML---ESPPKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQ 240
Query: 165 IEKLRNSS---------GATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGN 215
+ KL + G T +LPL +S + + Q SG
Sbjct: 241 LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSG-------------- 286
Query: 216 QLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNIS 275
L +PP T E+ I L+G +IGR G+ I+
Sbjct: 287 -LDASPPAS----------------------------THELTIPNDLIGCIIGRQGTKIN 317
Query: 276 RIRNESGAMIKVYGGKGEQKHRHIQFGGSAQQVALAKQRVDEYIYSQL 323
IR SGA IK+ R I G+ ++LA+ ++ + S++
Sbjct: 318 EIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSEV 365
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 95/174 (54%), Gaps = 15/174 (8%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G ++K+REE+ A I I++ ER++ I+ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGP------T 97
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
DA + A ++D NS ++ A T+RL++ SQ G LIG G I+++R
Sbjct: 98 DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV-TLRLVVPASQCGSLIGKGGSKIKEIR 156
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPR 223
S+GA + + A + LP + ++R V ISG A++ + +I + E+PP+
Sbjct: 157 ESTGAQVQV-AGDMLP-----NSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 75/158 (47%), Gaps = 26/158 (16%)
Query: 133 SKVAAGHVAAN-TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAH 191
SKV+ G + TIRLL+ G + G +IG G+ ++K+R SGA I I N C
Sbjct: 35 SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP--- 87
Query: 192 ESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADY 251
+R+V I+G A+ A I + E+ N + PA TS
Sbjct: 88 --ERIVTITGPTDAIFKAFAMIAYKFEED----------IINSMSNSPA------TSKPP 129
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYG 289
VT +++ S G LIG+ GS I IR +GA ++V G
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG 167
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 119/288 (41%), Gaps = 66/288 (22%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVV 108
V R++VP+ Q G +IGK G +I++IRE T A +++A D + ER + IS D ++
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTP-DAII 188
Query: 109 SDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSG----QN 164
++QI ++L +S + + + A+T ++ AG QA + G
Sbjct: 189 ----QCVKQICVVML---ESPPKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQ 240
Query: 165 IEKLRNSS---------GATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGN 215
+ KL + G T +LPL +S + + Q SG
Sbjct: 241 LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSG-------------- 286
Query: 216 QLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNIS 275
L +PP T E+ I L+G +IGR G+ I+
Sbjct: 287 -LDASPPAS----------------------------THELTIPNDLIGCIIGRQGTKIN 317
Query: 276 RIRNESGAMIKVYGGKGEQKHRHIQFGGSAQQVALAKQRVDEYIYSQL 323
IR SGA IK+ R I G+ ++LA+ ++ + S++
Sbjct: 318 EIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSEV 365
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 100/183 (54%), Gaps = 25/183 (13%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G ++K+REE+ A I I++ ER+I ++ N
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN----- 66
Query: 110 DAENALQQIAALI---LKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIE 166
A+ + A+I L++D S+S + AA T+RL++ SQ G LIG G I+
Sbjct: 67 ----AIFKAFAMIIDKLEEDISSSMTNSTAASRPPV-TLRLVVPASQCGSLIGKGGCKIK 121
Query: 167 KLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIG----NQLRENPP 222
++R S+GA + + A + LP + ++R + I+G +++ + +I L ++PP
Sbjct: 122 EIRESTGAQVQV-AGDMLP-----NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 223 RQV 225
+ V
Sbjct: 176 KGV 178
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 25/146 (17%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
TIRLL+ G + G +IG G++++K+R SGA I I N C +R++ ++G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN----CP-----ERIITLAGPT 65
Query: 204 PAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLV 263
A+ A I ++L E+ IS S + +A RP VT +++ S
Sbjct: 66 NAIFKAFAMIIDKLEED-----ISSSMTNSTAASRPP-----------VTLRLVVPASQC 109
Query: 264 GGLIGRCGSNISRIRNESGAMIKVYG 289
G LIG+ G I IR +GA ++V G
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQVAG 135
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 234 YSAIRPAQPFVE-----PTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVY 288
+S I + P V+ SA + E+ I L+G +IGR G+ I+ IR SGA IK+
Sbjct: 265 FSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA 324
Query: 289 GGKGEQKHRHIQFGGSAQQVALAKQRVDEYIYSQ 322
R + GSA ++LA+ ++ + S+
Sbjct: 325 NPVEGSTDRQVTITGSAASISLAQYLINVRLSSE 358
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 36 IEGSDPKRR------AKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAI 89
IE S P+ + A AQ + +P+ IG +IG++G +I +IR+ + A IKIA+ +
Sbjct: 268 IESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV 327
Query: 90 ARHEERVIIIS 100
+R + I+
Sbjct: 328 EGSTDRQVTIT 338
Score = 32.0 bits (71), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHIQFGGSAQQV--- 308
+T +L+ VG +IG+ G ++ ++R ESGA I + +G R I G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLAGPTNAIFKA 71
Query: 309 -ALAKQRVDEYIYSQLIQQAGA 329
A+ +++E I S + A
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAA 93
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 99/185 (53%), Gaps = 23/185 (12%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G +++IREE+ A I I++ ER+I ++ N
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN----- 66
Query: 110 DAENALQQIAALILK--DDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
A+ + A+I+ ++D NS + A T+RL++ +Q G LIG G I++
Sbjct: 67 ----AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKE 122
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIG----NQLRENPPR 223
+R S+GA + + A + LP + ++R + I+G +V + +I L ++P
Sbjct: 123 IRESTGAQVQV-AGDMLP-----NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQG 176
Query: 224 QVISI 228
+V++I
Sbjct: 177 RVMTI 181
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 38/282 (13%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVV 108
V R++VP+ Q G +IGK G +I++IRE T A +++A D + ER I I+ V
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA-----GVP 152
Query: 109 SDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKL 168
++QI ++L+ S+ G V + + A S C G ++
Sbjct: 153 QSVTECVKQICLVMLET------LSQSPQGRVMTIPYQPMPASSPVICAGGQ-----DRC 201
Query: 169 RNSSG---ATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQV 225
+++G AT + P PL A + + + P L L ++ Q
Sbjct: 202 SDAAGYPHATHDLEGP---PLDAYSIQGQHTIS-----PLDLAKLNQVARQ-----QSHF 248
Query: 226 ISISPAYNYSAIRPAQPFVEPTSADY-----VTFEMLISESLVGGLIGRCGSNISRIRNE 280
+ ++ I + P V+ A T E+ I +L+G +IGR G+NI+ IR
Sbjct: 249 AMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQM 308
Query: 281 SGAMIKVYGGKGEQKHRHIQFGGSAQQVALAKQRVDEYIYSQ 322
SGA IK+ R + GSA ++LA+ ++ + S+
Sbjct: 309 SGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 26/183 (14%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
TIRLL+ G + G +IG G++++++R SGA I I N C +R++ ++G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN----CP-----ERIITLTGPT 65
Query: 204 PAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLV 263
A+ A I ++L E+ I+ S + +A RP VT +++ +
Sbjct: 66 NAIFKAFAMIIDKLEED-----INSSMTNSTAASRPP-----------VTLRLVVPATQC 109
Query: 264 GGLIGRCGSNISRIRNESGAMIKVYGGK-GEQKHRHIQFGGSAQQVALAKQRVDEYIYSQ 322
G LIG+ G I IR +GA ++V G R I G Q V +++ +
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLET 169
Query: 323 LIQ 325
L Q
Sbjct: 170 LSQ 172
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 99/185 (53%), Gaps = 23/185 (12%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G +++IREE+ A I I++ ER+I ++ N
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN----- 66
Query: 110 DAENALQQIAALILK--DDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
A+ + A+I+ ++D NS + A T+RL++ +Q G LIG G I++
Sbjct: 67 ----AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKE 122
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIG----NQLRENPPR 223
+R S+GA + + A + LP + ++R + I+G +V + +I L ++P
Sbjct: 123 IRESTGAQVQV-AGDMLP-----NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQG 176
Query: 224 QVISI 228
+V++I
Sbjct: 177 RVMTI 181
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 38/282 (13%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVV 108
V R++VP+ Q G +IGK G +I++IRE T A +++A D + ER I I+ V
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA-----GVP 152
Query: 109 SDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKL 168
++QI ++L+ S+ G V + + A S C G ++
Sbjct: 153 QSVTECVKQICLVMLET------LSQSPQGRVMTIPYQPMPASSPVICAGGQ-----DRC 201
Query: 169 RNSSG---ATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQV 225
+++G AT + P PL A + + + P L L ++ Q
Sbjct: 202 SDAAGYPHATHDLEGP---PLDAYSIQGQHTIS-----PLDLAKLNQVARQ-----QSHF 248
Query: 226 ISISPAYNYSAIRPAQPFVEPTSADY-----VTFEMLISESLVGGLIGRCGSNISRIRNE 280
+ ++ I + P V+ A T E+ I +L+G +IGR G+NI+ IR
Sbjct: 249 AMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQM 308
Query: 281 SGAMIKVYGGKGEQKHRHIQFGGSAQQVALAKQRVDEYIYSQ 322
SGA IK+ R + GSA ++LA+ ++ + S+
Sbjct: 309 SGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 26/183 (14%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
TIRLL+ G + G +IG G++++++R SGA I I N C +R++ ++G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN----CP-----ERIITLTGPT 65
Query: 204 PAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLV 263
A+ A I ++L E+ I+ S + +A RP VT +++ +
Sbjct: 66 NAIFKAFAMIIDKLEED-----INSSMTNSTAASRPP-----------VTLRLVVPATQC 109
Query: 264 GGLIGRCGSNISRIRNESGAMIKVYGGK-GEQKHRHIQFGGSAQQVALAKQRVDEYIYSQ 322
G LIG+ G I IR +GA ++V G R I G Q V +++ +
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLET 169
Query: 323 LIQ 325
L Q
Sbjct: 170 LSQ 172
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 99/185 (53%), Gaps = 23/185 (12%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G +++IREE+ A I I++ ER+I ++ N
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN----- 66
Query: 110 DAENALQQIAALILK--DDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
A+ + A+I+ ++D NS + A T+RL++ +Q G LIG G I++
Sbjct: 67 ----AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKE 122
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIG----NQLRENPPR 223
+R S+GA + + A + LP + ++R + I+G +V + +I L ++P
Sbjct: 123 IRESTGAQVQV-AGDMLP-----NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQG 176
Query: 224 QVISI 228
+V++I
Sbjct: 177 RVMTI 181
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 38/282 (13%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVV 108
V R++VP+ Q G +IGK G +I++IRE T A +++A D + ER I I+ V
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA-----GVP 152
Query: 109 SDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKL 168
++QI ++L+ S+ G V + + A S C G ++
Sbjct: 153 QSVTECVKQICLVMLET------LSQSPQGRVMTIPYQPMPASSPVICAGGQ-----DRC 201
Query: 169 RNSSG---ATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQV 225
+++G AT + P PL A + + + P L L ++ Q
Sbjct: 202 SDAAGYPHATHDLEGP---PLDAYSIQGQHTIS-----PLDLAKLNQVARQ-----QSHF 248
Query: 226 ISISPAYNYSAIRPAQPFVEPTSADY-----VTFEMLISESLVGGLIGRCGSNISRIRNE 280
+ ++ I + P V+ A T E+ I +L+G +IGR G+NI+ IR
Sbjct: 249 AMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQM 308
Query: 281 SGAMIKVYGGKGEQKHRHIQFGGSAQQVALAKQRVDEYIYSQ 322
SGA IK+ R + GSA ++LA+ ++ + S+
Sbjct: 309 SGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 26/183 (14%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
TIRLL+ G + G +IG G++++++R SGA I I N C +R++ ++G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN----CP-----ERIITLTGPT 65
Query: 204 PAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLV 263
A+ A I ++L E+ I+ S + +A RP VT +++ +
Sbjct: 66 NAIFKAFAMIIDKLEED-----INSSMTNSTAASRPP-----------VTLRLVVPATQC 109
Query: 264 GGLIGRCGSNISRIRNESGAMIKVYGGK-GEQKHRHIQFGGSAQQVALAKQRVDEYIYSQ 322
G LIG+ G I IR +GA ++V G R I G Q V +++ +
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLET 169
Query: 323 LIQ 325
L Q
Sbjct: 170 LSQ 172
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 99/185 (53%), Gaps = 23/185 (12%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G +++IREE+ A I I++ ER+I ++ N
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN----- 66
Query: 110 DAENALQQIAALILK--DDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
A+ + A+I+ ++D NS + A T+RL++ +Q G LIG G I++
Sbjct: 67 ----AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKE 122
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIG----NQLRENPPR 223
+R S+GA + + A + LP + ++R + I+G +V + +I L ++P
Sbjct: 123 IRESTGAQVQV-AGDMLP-----NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQG 176
Query: 224 QVISI 228
+V++I
Sbjct: 177 RVMTI 181
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 38/282 (13%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVV 108
V R++VP+ Q G +IGK G +I++IRE T A +++A D + ER I I+ V
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA-----GVP 152
Query: 109 SDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKL 168
++QI ++L+ S+ G V + + A S C G ++
Sbjct: 153 QSVTECVKQICLVMLET------LSQSPQGRVMTIPYQPMPASSPVICAGGQ-----DRC 201
Query: 169 RNSSG---ATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQV 225
+++G AT + P PL A + + + P L L ++ Q
Sbjct: 202 SDAAGYPHATHDLEGP---PLDAYSIQGQHTIS-----PLDLAKLNQVARQ-----QSHF 248
Query: 226 ISISPAYNYSAIRPAQPFVEPTSADY-----VTFEMLISESLVGGLIGRCGSNISRIRNE 280
+ ++ I + P V+ A T E+ I +L+G +IGR G+NI+ IR
Sbjct: 249 AMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQM 308
Query: 281 SGAMIKVYGGKGEQKHRHIQFGGSAQQVALAKQRVDEYIYSQ 322
SGA IK+ R + GSA ++LA+ ++ + S+
Sbjct: 309 SGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 26/183 (14%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
TIRLL+ G + G +IG G++++++R SGA I I N C +R++ ++G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN----CP-----ERIITLTGPT 65
Query: 204 PAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLV 263
A+ A I ++L E+ I+ S + +A RP VT +++ +
Sbjct: 66 NAIFKAFAMIIDKLEED-----INSSMTNSTAASRPP-----------VTLRLVVPATQC 109
Query: 264 GGLIGRCGSNISRIRNESGAMIKVYGGK-GEQKHRHIQFGGSAQQVALAKQRVDEYIYSQ 322
G LIG+ G I IR +GA ++V G R I G Q V +++ +
Sbjct: 110 GSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLET 169
Query: 323 LIQ 325
L Q
Sbjct: 170 LSQ 172
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 32/237 (13%)
Query: 24 DVSGKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATI 83
+ +GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++
Sbjct: 14 ETNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASV 73
Query: 84 KIADAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAAN 143
+ D+ ER++ IS +D E + + +I E + G
Sbjct: 74 SVPDSSG--PERILSIS--------ADTETIGEILKKII-----PTLEEYQHYKGSDFDC 118
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
+RLLI S AG +IG+ G I++LR ++ TI + H +DRVV I G
Sbjct: 119 ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE------CCPHSTDRVVLIGGKP 172
Query: 204 PAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISE 260
V+ + I + + E+P + +P P + DY F M+ +
Sbjct: 173 DRVVECIKIILDLISESPIK-----------GRAQPYDPNFYDETYDYGGFTMMFDD 218
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ ++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + +
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG--TQDQIQ 409
Query: 110 DAENALQ 116
+A+ LQ
Sbjct: 410 NAQYLLQ 416
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I P + DR++ I+G
Sbjct: 353 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE-------GSEDRIITITGTQ 405
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 406 DQIQNAQYLLQNSVKQ 421
Score = 34.7 bits (78), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
+T ++ I + L G +IG+ G I +IR+ESGA IK+
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI 387
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 30/245 (12%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C H +DR
Sbjct: 138 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PHSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFE 255
VV I G V+ + I + + E+P + +P P + DY F
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESPIK-----------GRAQPYDPNFYDETYDYGGFT 240
Query: 256 MLISE 260
M+ +
Sbjct: 241 MMFDD 245
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 29/155 (18%)
Query: 145 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVP 204
+R+L+ AG +IG G+NI+ LR A++ + + +R++ IS D+
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV---------PDSSGPERILSISADIE 95
Query: 205 AVLNALVEIGNQLREN---PPRQVISISP-------AYNYSAIRPAQPFVEPTSADY-VT 253
+ L +I L E P S P NY + +D+
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK---------GSDFDCE 146
Query: 254 FEMLISESLVGGLIGRCGSNISRIRNESGAMIKVY 288
+LI +SL GG+IG G+ I +R + IK++
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ ++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG--TQDQIQ 445
Query: 110 DAENALQ 116
+A+ LQ
Sbjct: 446 NAQYLLQ 452
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
+T ++ I + L G +IG+ G I +IR+ESGA IK+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI 423
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 30/245 (12%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C H +DR
Sbjct: 138 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PHSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFE 255
VV I G V+ + I + + E+P + +P P + DY F
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESPIK-----------GRAQPYDPNFYDETYDYGGFT 240
Query: 256 MLISE 260
M+ +
Sbjct: 241 MMFDD 245
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 29/155 (18%)
Query: 145 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVP 204
+R+L+ AG +IG G+NI+ LR A++ + + +R++ IS D+
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV---------PDSSGPERILSISADIE 95
Query: 205 AVLNALVEIGNQLREN---PPRQVISISP-------AYNYSAIRPAQPFVEPTSADY-VT 253
+ L +I L E P S P NY + +D+
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK---------GSDFDCE 146
Query: 254 FEMLISESLVGGLIGRCGSNISRIRNESGAMIKVY 288
+LI +SL GG+IG G+ I +R + IK++
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ ++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG--TQDQIQ 445
Query: 110 DAENALQ 116
+A+ LQ
Sbjct: 446 NAQYLLQ 452
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
+T ++ I + L G +IG+ G I +IR+ESGA IK+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI 423
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 30/245 (12%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C H +DR
Sbjct: 138 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PHSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFE 255
VV I G V+ + I + + E+P + +P P + DY F
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESPIK-----------GRAQPYDPNFYDETYDYGGFT 240
Query: 256 MLISE 260
M+ +
Sbjct: 241 MMFDD 245
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 29/155 (18%)
Query: 145 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVP 204
+R+L+ AG +IG G+NI+ LR A++ + + +R++ IS D+
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV---------PDSSGPERILSISADIE 95
Query: 205 AVLNALVEIGNQLREN---PPRQVISISP-------AYNYSAIRPAQPFVEPTSADY-VT 253
+ L +I L E P S P NY + +D+
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK---------GSDFDCE 146
Query: 254 FEMLISESLVGGLIGRCGSNISRIRNESGAMIKVY 288
+LI +SL GG+IG G+ I +R + IK++
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ ++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG--TQDQIQ 445
Query: 110 DAENALQ 116
+A+ LQ
Sbjct: 446 NAQYLLQ 452
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
+T ++ I + L G +IG+ G I +IR+ESGA IK+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI 423
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 30/245 (12%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C H +DR
Sbjct: 138 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PHSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFE 255
VV I G V+ + I + + E+P + +P P + DY F
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESPIK-----------GRAQPYDPNFYDETYDYGGFT 240
Query: 256 MLISE 260
M+ +
Sbjct: 241 MMFDD 245
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 29/155 (18%)
Query: 145 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVP 204
+R+L+ AG +IG G+NI+ LR A++ + + +R++ IS D+
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV---------PDSSGPERILSISADIE 95
Query: 205 AVLNALVEIGNQLREN---PPRQVISISP-------AYNYSAIRPAQPFVEPTSADY-VT 253
+ L +I L E P S P NY + +D+
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK---------GSDFDCE 146
Query: 254 FEMLISESLVGGLIGRCGSNISRIRNESGAMIKVY 288
+LI +SL GG+IG G+ I +R + IK++
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDN--DNV 107
+ ++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + N
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 108 VSDAENALQQIA 119
+N+++Q A
Sbjct: 448 QYLLQNSVKQYA 459
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
+T ++ I + L G +IG+ G I +IR+ESGA IK+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI 423
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 30/245 (12%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C H +DR
Sbjct: 138 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PHSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFE 255
VV I G V+ + I + + E+P + +P P + DY F
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESPIK-----------GRAQPYDPNFYDETYDYGGFT 240
Query: 256 MLISE 260
M+ +
Sbjct: 241 MMFDD 245
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 29/155 (18%)
Query: 145 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVP 204
+R+L+ AG +IG G+NI+ LR A++ + + +R++ IS D+
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV---------PDSSGPERILSISADIE 95
Query: 205 AVLNALVEIGNQLREN---PPRQVISISP-------AYNYSAIRPAQPFVEPTSADY-VT 253
+ L +I L E P S P NY + +D+
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK---------GSDFDCE 146
Query: 254 FEMLISESLVGGLIGRCGSNISRIRNESGAMIKVY 288
+LI +SL GG+IG G+ I +R + IK++
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDN--DNV 107
+ ++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + N
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 108 VSDAENALQQIA 119
+N+++Q A
Sbjct: 448 QYLLQNSVKQYA 459
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
+T ++ I + L G +IG+ G I +IR+ESGA IK+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI 423
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 30/245 (12%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C H +DR
Sbjct: 138 FKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PHSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFE 255
VV I G V+ + I + + E+P + +P P + DY F
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESPIK-----------GRAQPYDPNFYDETYDYGGFT 240
Query: 256 MLISE 260
M+ +
Sbjct: 241 MMFDD 245
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 29/155 (18%)
Query: 145 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVP 204
+R+L+ AG +IG G+NI+ LR A++ + + +R++ IS D+
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV---------PDSSGPERILSISADIE 95
Query: 205 AVLNALVEIGNQLREN---PPRQVISISP-------AYNYSAIRPAQPFVEPTSADY-VT 253
+ L +I L E P S P NY + +D+
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFK---------GSDFDCE 146
Query: 254 FEMLISESLVGGLIGRCGSNISRIRNESGAMIKVY 288
+LI +SL GG+IG G+ I +R + IK++
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ ++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG--TQDQIQ 445
Query: 110 DAENALQ 116
+A+ LQ
Sbjct: 446 NAQYLLQ 452
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I P + DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE-------GSEDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
Score = 35.0 bits (79), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
+T ++ I + L G +IG+ G I +IR+ESGA IK+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI 423
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 123/270 (45%), Gaps = 44/270 (16%)
Query: 44 RAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI--ADAIARHEERVIIISS 101
+ K D+ R++VP++ +G +IGKEG I+ I ++T++ I + + E+ + I+S+
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 102 KDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMS 161
+ + A + I ++ K+ ++ +++L + G LIG
Sbjct: 250 PEGTSA------ACKSILEIMHKEAQDIKFTEEIP--------LKILAHNNFVGRLIGKE 295
Query: 162 GQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENP 221
G+N++K+ + I I +L L + +R + + G+V A EI ++RE+
Sbjct: 296 GRNLKKIEQDTDTKITISPLQELTL----YNPERTITVKGNVETCAKAEEEIMKKIRESY 351
Query: 222 PRQVISIS------PAYNYSAI---RPAQPFVEPTSA-------DYVTFEMLISESL--- 262
+ S++ P N +A+ P PTS Y FE +E++
Sbjct: 352 ENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPYPQFEQSETETVHLF 411
Query: 263 -----VGGLIGRCGSNISRIRNESGAMIKV 287
VG +IG+ G +I ++ +GA IK+
Sbjct: 412 IPALSVGAIIGKQGQHIKQLSRFAGASIKI 441
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 113/286 (39%), Gaps = 73/286 (25%)
Query: 46 KAQDVLF------RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIARHEERV 96
+AQD+ F +I+ + +G++IGKEG ++KI ++T I I+ + + ER
Sbjct: 267 EAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERT 326
Query: 97 IIISSKDNDNVVSDAENALQQ---------IAALILKDD-------------DSNSEASK 134
I + K N + AE + + IA++ L+ S
Sbjct: 327 ITV--KGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPP 384
Query: 135 VAAGHVAA-------------NTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAP 181
+G +A T+ L I G +IG GQ+I++L +GA+I I AP
Sbjct: 385 PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI-AP 443
Query: 182 NQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQ 241
+ P R+V I+G A A I +++E +
Sbjct: 444 AEAP-----DAKVRMVIITGPPEAQFKAQGRIYGKIKE---------------------E 477
Query: 242 PFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
FV P + + + G +IG+ G ++ ++N S A + V
Sbjct: 478 NFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
Score = 38.5 bits (88), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE-RVIIISSKDNDNVVSDAE 112
+ +P+ +G +IGK+G I+++ A+IKIA A A + R++II+ +A+
Sbjct: 410 LFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGP------PEAQ 463
Query: 113 NALQQIAALILKDDD--SNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRN 170
Q +K+++ S E K+ A + + AG +IG G+ + +L+N
Sbjct: 464 FKAQGRIYGKIKEENFVSPKEEVKLEA--------HIRVPSFAAGRVIGKGGKTVNELQN 515
Query: 171 SSGATIVILAPNQLPLCASAHESDR-VVQISG 201
S A +V+ P + E+D+ VV+I+G
Sbjct: 516 LSSAEVVV------PRDQTPDENDQVVVKITG 541
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 137/331 (41%), Gaps = 76/331 (22%)
Query: 16 VTEPEP--RHDVSGKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQ 73
V+ P P R RE G G +A+ D RI+VP++ +G +IGKEG I+
Sbjct: 160 VSSPSPPQRAQRGDHSSREQGHAPGGT--SQARQIDFPLRILVPTQFVGAIIGKEGLTIK 217
Query: 74 KIREETKATIKI--ADAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNSE 131
I ++T++ + I + E+ V I ++ + + A + I ++ K+ D
Sbjct: 218 NITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS------EACRMILEIMQKEADETKL 271
Query: 132 ASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAH 191
A ++ +++L G LIG G+N++K+ + +G I I + L S +
Sbjct: 272 AEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL----SIY 319
Query: 192 ESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISIS------PAYNYSAI-------- 237
+R + + G V A +A +EI +LRE +++++ P N SA+
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLS 379
Query: 238 --------------RPAQPFVEPTSADYVT----------------------FEMLISES 261
P PF T + Y + + I
Sbjct: 380 VLSPPAGPRGAPPAAPYHPFT--THSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQ 437
Query: 262 LVGGLIGRCGSNISRIRNESGAMIKVYGGKG 292
VG +IG+ G++I ++ +GA IK+ +G
Sbjct: 438 AVGAIIGKKGAHIKQLARFAGASIKIAPAEG 468
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 38 GSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARH-EERV 96
G P + + + + +P++ +G +IGK+G I+++ A+IKIA A ER+
Sbjct: 416 GPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERM 475
Query: 97 IIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGC 156
+II+ A +I + +++ N + H+ + S AG
Sbjct: 476 VIITGPPEAQF-----KAQGRIFGKLKEENFFNPKEEVKLEAHIR-------VPSSTAGR 523
Query: 157 LIGMSGQNIEKLRNSSGATIVI 178
+IG G+ + +L+N + A +++
Sbjct: 524 VIGKGGKTVNELQNLTSAEVIV 545
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 30/245 (12%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C +DR
Sbjct: 138 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PQSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFE 255
VV I G V+ + I + + E+P + +P P + DY F
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESPIK-----------GRAQPYDPNFYDETYDYGGFT 240
Query: 256 MLISE 260
M+ +
Sbjct: 241 MMFDD 245
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 29/155 (18%)
Query: 145 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVP 204
+R+L+ AG +IG G+NI+ LR A++ + + +R++ IS D+
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV---------PDSSGPERILSISADIE 95
Query: 205 AVLNALVEIGNQLREN---PPRQVISISP-------AYNYSAIRPAQPFVEPTSADY-VT 253
+ L +I L E P S P NY + +D+
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK---------GSDFDCE 146
Query: 254 FEMLISESLVGGLIGRCGSNISRIRNESGAMIKVY 288
+LI +SL GG+IG G+ I +R + IK++
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDN--DNV 107
+ ++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + N
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 108 VSDAENALQQIA 119
+N+++Q A
Sbjct: 448 QYLLQNSVKQYA 459
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I P + DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE-------GSEDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
Score = 35.0 bits (79), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
+T ++ I + L G +IG+ G I +IR+ESGA IK+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI 423
>sp|C5DIR2|HEK2_LACTC Heterogeneous nuclear rnp K-like protein 2 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=HEK2 PE=3 SV=1
Length = 285
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 40/283 (14%)
Query: 48 QDVL-FRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDN 106
QD + R++V ++ ++IG +G IQKIRE +K I I+ +R++ S
Sbjct: 7 QDTVNHRVLVSLKEAARIIGAQGMTIQKIRESSKVKIGISPHERGCSDRILSCSGS---- 62
Query: 107 VVSDAENALQQIAALILKDDDSNSEASKVAAGHVAA----------------NTIRLLIA 150
NA+ + ++ +DD S + +RL+++
Sbjct: 63 -AQGVANAIGDVVEVLNQDDSEPETHSYKPLNFILPAPSATEIQDPESVKRIGNLRLIVS 121
Query: 151 GSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNAL 210
SQ +IG G I+ L G V+ + N LP DRVV+I G A+ + L
Sbjct: 122 NSQVSSIIGTQGSRIKSLIEKHGVK-VVASKNFLP-----DSQDRVVEIQGFPGAIASCL 175
Query: 211 VEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRC 270
V+I L P P++ + P + VT ++ I VG L+GR
Sbjct: 176 VDISEILAAEP-------KPSHE----KQYYPHTKSQEEGSVTKDVAIPVEYVGALLGRG 224
Query: 271 GSNISRIRNESGAMIKVYGGKGEQKHRHIQFGGSAQQ-VALAK 312
G+ +S +R + + V E+ +R G+ Q V LA+
Sbjct: 225 GNRVSSLRKYTKTKVIVSDEPDEENNRVFTITGNNQNSVKLAE 267
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 43/264 (16%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI--ADAIARHEERVIIISSKDNDN 106
D+ R++VP++ +G +IGKEG I+ I ++T++ I + + E+ + I S+ +
Sbjct: 198 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEG-- 255
Query: 107 VVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIE 166
S A + +I KD + E +++L + G LIG G+N++
Sbjct: 256 -CSAACRMILEIMNQEAKDTKTADEVP-----------LKVLAHNNFVGRLIGKEGRNLK 303
Query: 167 KLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVI 226
K+ + I I L L + +R + + G + A A EI ++RE +
Sbjct: 304 KVEQDTDTKITISPLQDLTL----YNPERTITVKGSIEACCLAEQEIMKKVREAYDNDIA 359
Query: 227 SIS------PAYNYSAIR-----------------PAQPFVEPTSADYVTFEMLISESLV 263
+++ P N AI P P+ +++ T + I V
Sbjct: 360 AMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSVPGPPYGPMGASEQETVHVYIPAQAV 419
Query: 264 GGLIGRCGSNISRIRNESGAMIKV 287
G LIG+ G +I ++ +GA IK+
Sbjct: 420 GALIGKKGQHIKQLSRFAGASIKI 443
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE-RVIIISSKDNDNVVSDAE 112
+ +P++ +G +IGK+G I+++ A+IKIA A A + R++I++ +A+
Sbjct: 412 VYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGP------PEAQ 465
Query: 113 NALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSS 172
Q LK+++ +V + +A + AG +IG G+ + +L+N +
Sbjct: 466 FKAQGRIYGKLKEENFFGPKEEVKL------ETHIKVAAAAAGRVIGKGGKTVNELQNLT 519
Query: 173 GATIVILAPNQLPLCASAHESDRVV 197
A +V+ P + E D+V+
Sbjct: 520 AAEVVV------PREQTPDEHDQVI 538
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 119/272 (43%), Gaps = 48/272 (17%)
Query: 44 RAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI--ADAIARHEERVIIISS 101
+ K D+ R++VP++ +G +IGKEG I+ I ++T++ I + + E+ + I+S+
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILST 249
Query: 102 KDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMS 161
+ + A + I ++ K+ ++ +++L + G LIG
Sbjct: 250 PEGTSA------ACKSILEIMHKEAQDIKFTEEIP--------LKILAHNNFVGRLIGKE 295
Query: 162 GQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENP 221
G+N++K+ + I I +L L + +R + + G V A EI ++RE+
Sbjct: 296 GRNLKKIEQDTDTKITISPLQELTL----YNPERTITVKGSVETCAKAEEEIMKKIRESY 351
Query: 222 PRQVISIS------PAYNYSA--------------------IRPAQPFVEPTSADYVTFE 255
+ S++ P N +A + P P E + + T
Sbjct: 352 ENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQSETE--TVH 409
Query: 256 MLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
+ I VG +IG+ G +I ++ +GA IK+
Sbjct: 410 LFIPALSVGAIIGKQGQHIKQLSRFAGASIKI 441
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 109/284 (38%), Gaps = 69/284 (24%)
Query: 46 KAQDVLF------RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA------------- 86
+AQD+ F +I+ + +G++IGKEG ++KI ++T I I+
Sbjct: 267 EAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERT 326
Query: 87 -------DAIARHEERVI--IISSKDNDNVVSDAENAL---QQIAALILKDDDSNSEASK 134
+ A+ EE ++ I S +ND + + L + AL L S
Sbjct: 327 ITVKGSVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPT 386
Query: 135 VAAG-----------HVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQ 183
T+ L I G +IG GQ+I++L +GA+I I AP +
Sbjct: 387 SGPPSTLTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI-APAE 445
Query: 184 LPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPF 243
P R+V I+G A A I +++E + F
Sbjct: 446 AP-----DAKVRMVIITGPPEAQFKAQGRIYGKIKE---------------------ENF 479
Query: 244 VEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
V P + + + G +IG+ G ++ +++ S A + V
Sbjct: 480 VSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVV 523
Score = 35.8 bits (81), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE-RVIIISSKDNDNVVSDAE 112
+ +P+ +G +IGK+G I+++ A+IKIA A A + R++II+ +A+
Sbjct: 410 LFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGP------PEAQ 463
Query: 113 NALQQIAALILKDDD--SNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRN 170
Q +K+++ S E K+ A + + AG +IG G+ + +L++
Sbjct: 464 FKAQGRIYGKIKEENFVSPKEEVKLEA--------HIRVPSFAAGRVIGKGGKTVNELQS 515
Query: 171 SSGATIVILAPNQLPLCASAHESDR-VVQISG 201
S A +V+ P + E+D+ VV+I+G
Sbjct: 516 LSSAEVVV------PRDQTPDENDQVVVKITG 541
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 130/322 (40%), Gaps = 77/322 (23%)
Query: 14 SVVTEPEPRHDV---SGKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGH 70
S+ +PEP V S K +D Q + R ++ +R+ G +IGK G
Sbjct: 64 SMTNQPEPTSQVPPISAKPPMDDATY---------ATQQLTLRALLSTREAGIIIGKAGK 114
Query: 71 RIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNS 130
+ ++R T + A+ +RV+ IS +NVV + A D + S
Sbjct: 115 NVAELRSTTNVKAGVTKAVPNVHDRVLTISGP-LENVVRAYRFIIDIFAKNSTNPDGTPS 173
Query: 131 EASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASA 190
+A+ +RLLIA S G +IG +G I KL + +I + + LP
Sbjct: 174 DAN-------TPRKLRLLIAHSLMGSIIGRNGLRI-KLIQDKCSCRMIASKDMLP----- 220
Query: 191 HESDRVVQISGDVPAVLNALVEIGNQLRE-----------NP----------------PR 223
++R V+I G V + A+ EIG L + NP P+
Sbjct: 221 QSTERTVEIHGTVDNLHAAIWEIGKCLIDDWERGAGTVFYNPVSRLTQPLPSLASTASPQ 280
Query: 224 QVISISPA---------------YNYSA-IRPA--QPFVEPTSADYVTFEMLISESLVGG 265
QV SP +Y A + PA PF++ VT + I +VG
Sbjct: 281 QV---SPPAAPSTTSGEAIPENFVSYGAQVFPATQMPFLQ---QPKVTQNISIPADMVGC 334
Query: 266 LIGRCGSNISRIRNESGAMIKV 287
+IGR GS IS IR SG+ I +
Sbjct: 335 IIGRGGSKISEIRRTSGSKISI 356
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSG--ATIVILAPNQLPLCASAHESDRVVQISG 201
T+R L++ +AG +IG +G+N+ +LR+++ A + PN H DRV+ ISG
Sbjct: 95 TLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPN-------VH--DRVLTISG 145
Query: 202 DVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYV-TFEMLISE 260
+ V+ A R +I I A P P+ A+ +LI+
Sbjct: 146 PLENVVRAY------------RFIIDIF------AKNSTNPDGTPSDANTPRKLRLLIAH 187
Query: 261 SLVGGLIGRCGSNISRIRNE-SGAMIKVYGGKGEQKHRHIQFGGSAQQVALAKQRVDEYI 319
SL+G +IGR G I I+++ S MI + R ++ G+ + A + + +
Sbjct: 188 SLMGSIIGRNGLRIKLIQDKCSCRMIASKDMLPQSTERTVEIHGTVDNLHAAIWEIGKCL 247
Query: 320 YSQLIQQAGA 329
+ AG
Sbjct: 248 IDDWERGAGT 257
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 113/272 (41%), Gaps = 38/272 (13%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP + +G +IG+ G +I +I+ E+ I+IA + ER +++ + A+ L
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPES--IEQAKRLL 141
Query: 116 QQI------AALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
QI D DSNS ++ LI S+ G +IG G+ I++L+
Sbjct: 142 GQIVDRCRNGPGFHNDIDSNSTIQEI------------LIPASKVGLVIGRGGETIKQLQ 189
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISIS 229
+G +V++ LP A D+ ++I+GD V A + +RE +
Sbjct: 190 ERTGVKMVMIQDGPLPTGA-----DKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVR 244
Query: 230 PAYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYG 289
+N + + E+ + VG +IGR G I +I+N++G I+
Sbjct: 245 GDFN-------------SRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKP 291
Query: 290 GKGEQKHRHIQFGGSAQQVALAKQRVDEYIYS 321
G R Q G + A + E I +
Sbjct: 292 DDGISPERAAQVMGPPDRCQHAAHIISELILT 323
Score = 35.4 bits (80), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
+T E + + +VG +IGR G ISRI+ ESG I++
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQI 113
Score = 35.4 bits (80), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 112/279 (40%), Gaps = 33/279 (11%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDA-- 111
I++P+ ++G VIG+ G I++++E T + + ++ + + + DA
Sbjct: 167 ILIPASKVGLVIGRGGETIKQLQERTGVKMVMI------QDGPLPTGADKPLRITGDAFK 220
Query: 112 -ENALQQIAALILKDDDSNSEA------SKVAAGHVAANTIRLLIAGSQAGCLIGMSGQN 164
+ A + + +I + D ++ S++ G + + R + G +IG +G+
Sbjct: 221 VQQAREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVSVPRFAV-----GIVIGRNGEM 275
Query: 165 IEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQ 224
I+K++N +G I + + +R Q+ G +A I + R
Sbjct: 276 IKKIQNDAGVRIQFKPDDGI-------SPERAAQVMGPPDRCQHAAHIISELILTAQERD 328
Query: 225 VISISPAYNYSAIRPAQPFV-EPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGA 283
A V P +T+ + G +IG+ G NI I +SGA
Sbjct: 329 GFGGLAAARGRGRGRGDWSVGAPGGVQEITY--TVPADKCGLVIGKGGENIKSINQQSGA 386
Query: 284 MIKVYGG---KGEQKHRHIQFGGSAQQVALAKQRVDEYI 319
+++ + R G QQ+ +A+Q +DE +
Sbjct: 387 HVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQLIDEKV 425
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 41/263 (15%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNV 107
D+ R++VP++ +G +IGKEG I+ I ++T++ I + A E+ I I S
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTP---- 250
Query: 108 VSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
A + I ++ K+ A +V +++L + G LIG G+N++K
Sbjct: 251 -EGCSAACKMILEIMQKEAKDTKTADEVP--------LKILAHNNFVGRLIGKEGRNLKK 301
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVIS 227
+ + I I + L L + +R + + G + A EI ++RE V +
Sbjct: 302 VEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCKAEQEIMKKVREAYENDVAA 357
Query: 228 IS------PAYNYSAIR---------PAQPFVEPTSADYVTF--------EMLISESLVG 264
+S P N +A+ P P +A Y +F + I VG
Sbjct: 358 MSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAPYSSFMPPEQETVHVFIPAQAVG 417
Query: 265 GLIGRCGSNISRIRNESGAMIKV 287
+IG+ G +I ++ + A IK+
Sbjct: 418 AIIGKKGQHIKQLSRFASASIKI 440
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 115/288 (39%), Gaps = 62/288 (21%)
Query: 35 EIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIAR 91
EI + K A +V +I+ + +G++IGKEG ++K+ ++T+ I I+ D
Sbjct: 262 EIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLY 321
Query: 92 HEERVIIIS-------------------SKDNDNVVSDAENAL---QQIAALILKDDDSN 129
+ ER I + + +ND ++ L +AA+ L SN
Sbjct: 322 NPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSN 381
Query: 130 SEASKVAAGHVAA----------NTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVIL 179
+ ++ AA T+ + I G +IG GQ+I++L + A+I I
Sbjct: 382 AVPPPPSSVSGAAPYSSFMPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI- 440
Query: 180 APNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRP 239
AP + P R+V I+G A A I +L+E
Sbjct: 441 APPETP-----DSKVRMVVITGPPEAQFKAQGRIYGKLKE-------------------- 475
Query: 240 AQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
+ F P + + + S G +IG+ G ++ ++N + A + V
Sbjct: 476 -ENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 522
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 46/266 (17%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNV 107
D+ R++VP++ +G +IGKEG I+ I ++T++ I + A E+ I + S
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP---- 250
Query: 108 VSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
+A + I ++ K+ A +V +++L + G LIG G+N++K
Sbjct: 251 -EGCSSACKMILEIMHKEAKDTKTADEVP--------LKILAHNNFVGRLIGKEGRNLKK 301
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVIS 227
+ + I I + L L + +R + + G + A EI ++RE V +
Sbjct: 302 VEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAA 357
Query: 228 IS------PAYNYSAI--------------------RPAQPFVEPTSADYVTFEMLISES 261
+S P N +A+ P F++ + V ++ I
Sbjct: 358 MSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMV--QVFIPAQ 415
Query: 262 LVGGLIGRCGSNISRIRNESGAMIKV 287
VG +IG+ G +I ++ + A IK+
Sbjct: 416 AVGAIIGKKGQHIKQLSRFASASIKI 441
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 113/290 (38%), Gaps = 65/290 (22%)
Query: 35 EIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIAR 91
EI + K A +V +I+ + +G++IGKEG ++K+ ++T+ I I+ D
Sbjct: 262 EIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLY 321
Query: 92 HEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAG-HVAA-------- 142
+ ER I + +N + ++++ D + S S + G ++AA
Sbjct: 322 NPERTITVKGAI-ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASS 380
Query: 143 -------------------------NTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIV 177
+++ I G +IG GQ+I++L + A+I
Sbjct: 381 SAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIK 440
Query: 178 ILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNYSAI 237
I AP + P R+V I+G A A I +L+E
Sbjct: 441 I-APPETP-----DSKVRMVVITGPPEAQFKAQGRIYGKLKE------------------ 476
Query: 238 RPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKV 287
+ F P + + + S G +IG+ G ++ ++N + A + V
Sbjct: 477 ---ENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 51 LFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADA-IARHEERVIIISSKDNDNVVS 109
+ ++ +P++ +G +IGK+G I+++ A+IKIA + R+++I+
Sbjct: 407 MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGP------P 460
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
+A+ Q LK+++ +V + + S AG +IG G+ + +L+
Sbjct: 461 EAQFKAQGRIYGKLKEENFFGPKEEVKL------ETHIRVPASAAGRVIGKGGKTVNELQ 514
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVV 197
N + A +V+ P + E+D+V+
Sbjct: 515 NLTAAEVVV------PRDQTPDENDQVI 536
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 46/266 (17%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNV 107
D+ R++VP++ +G +IGKEG I+ I ++T++ I + A E+ I + S
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS-----T 249
Query: 108 VSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
+A + I ++ K+ A +V +++L + G LIG G+N++K
Sbjct: 250 PEGCSSACKMILEIMHKEAKDTKTADEVP--------LKILAHNNFVGRLIGKEGRNLKK 301
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVIS 227
+ + I I + L L + +R + + G + A EI ++RE V +
Sbjct: 302 VEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAA 357
Query: 228 IS------PAYNYSAI--------------------RPAQPFVEPTSADYVTFEMLISES 261
+S P N +A+ P F++ + V ++ I
Sbjct: 358 MSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMV--QVFIPAQ 415
Query: 262 LVGGLIGRCGSNISRIRNESGAMIKV 287
VG +IG+ G +I ++ + A IK+
Sbjct: 416 AVGAIIGKKGQHIKQLSRFASASIKI 441
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 51 LFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADA-IARHEERVIIISSKDNDNVVS 109
+ ++ +P++ +G +IGK+G I+++ A+IKIA + R++II+
Sbjct: 407 MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP------P 460
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
+A+ Q LK+++ +V + + S AG +IG G+ + +L+
Sbjct: 461 EAQFKAQGRIYGKLKEENFFGPKEEVKL------ETHIRVPASAAGRVIGKGGKTVNELQ 514
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVV 197
N + A +V+ P + E+D+V+
Sbjct: 515 NLTAAEVVV------PRDQTPDENDQVI 536
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 46/266 (17%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNV 107
D+ R++VP++ +G +IGKEG I+ I ++T++ I + A E+ I + S
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS-----T 249
Query: 108 VSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
+A + I ++ K+ A +V +++L + G LIG G+N++K
Sbjct: 250 PEGCSSACKMILEIMHKEAKDTKTADEVP--------LKILAHNNFVGRLIGKEGRNLKK 301
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVIS 227
+ + I I + L L + +R + + G + A EI ++RE V +
Sbjct: 302 VEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAA 357
Query: 228 IS------PAYNYSAI--------------------RPAQPFVEPTSADYVTFEMLISES 261
+S P N +A+ P F++ + V ++ I
Sbjct: 358 MSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYGSFMQAPEQEMV--QVFIPAQ 415
Query: 262 LVGGLIGRCGSNISRIRNESGAMIKV 287
VG +IG+ G +I ++ + A IK+
Sbjct: 416 AVGAIIGKKGQHIKQLSRFASASIKI 441
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 51 LFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADA-IARHEERVIIISSKDNDNVVS 109
+ ++ +P++ +G +IGK+G I+++ A+IKIA + R+++I+
Sbjct: 407 MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGP------P 460
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
+A+ Q LK+++ +V + + S AG +IG G+ + +L+
Sbjct: 461 EAQFKAQGRIYGKLKEENFFGPKEEVKL------ETHIRVPASAAGRVIGKGGKTVNELQ 514
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVV 197
N + A +V+ P + E+D+V+
Sbjct: 515 NLTAAEVVV------PRDQTPDENDQVI 536
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIARHEERVIII--SSKD 103
+ ++++PS G +IGK G I ++++ET ATIK++ D ERV ++ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 104 NDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQ 163
+ V S +++I + K + N + A +L++ S AG +IG G
Sbjct: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGA 151
Query: 164 NIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENP 221
++ + SGA + + +Q P + E RVV +SG+ V A+ I +++E+P
Sbjct: 152 TVKAVMEQSGAWVQL---SQKPEGINLQE--RVVTVSGEPEQVHKAVSAIVQKVQEDP 204
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 145 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVP 204
+++LI AG +IG GQ I +L+ +GATI + ++RV + G
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF----YPGTTERVCLVQGTAE 90
Query: 205 AVLNALVE-IGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLV 263
A LNA+ I ++RE P Q ++ N I Q + P A ++++ S
Sbjct: 91 A-LNAVHSFIAEKVREIP--QAMTKPEVVN---ILQPQTTMNPDRAKQA--KLIVPNSTA 142
Query: 264 GGLIGRCGSNISRIRNESGAMIKV 287
G +IG+ G+ + + +SGA +++
Sbjct: 143 GLIIGKGGATVKAVMEQSGAWVQL 166
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 132/309 (42%), Gaps = 52/309 (16%)
Query: 38 GSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI--ADAIARHEER 95
G+ PK ++ DV R++VP++ +G +IGKEG I+ I ++T + I I + E+
Sbjct: 186 GARPKLQS---DVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKP 242
Query: 96 VIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAG 155
+ + S+ + +A + I ++ K+ ++ +++L + G
Sbjct: 243 ITVHSTPEG------CSSACRNIMEIMQKEAIDTKITEEIP--------LKILAHNNFVG 288
Query: 156 CLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGN 215
LIG G+N++K+ + I I L L + +R + + G + A A EI
Sbjct: 289 RLIGKEGRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGTLDACAKAEEEIMK 344
Query: 216 QLRENPPRQVISIS------PAYNYSA-----------IRPAQPFVEPTSAD--YVTF-- 254
++RE+ V ++ P N +A I P+ P A Y +F
Sbjct: 345 KVRESYENDVAAMHLQSNLIPGLNLNALGLFPGAASGGISPSVVSGPPPGAQAGYQSFGA 404
Query: 255 -------EMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKG-EQKHRHIQFGGSAQ 306
+ I VG +IG+ G +I ++ +GA IK+ G + K R + G +
Sbjct: 405 QMESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGIDAKQRMVIISGPPE 464
Query: 307 QVALAKQRV 315
A+ R+
Sbjct: 465 AQFKAQGRI 473
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 22/151 (14%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIA-RHEERVIIISSKDNDNVVSDAE 112
+ +P+ +G +IGK+G I+++ A+IKIA A ++R++IIS +A+
Sbjct: 413 LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGIDAKQRMVIISGP------PEAQ 466
Query: 113 NALQQIAALILKDDDSNSEASKVAA-GHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNS 171
Q LK+++ +V H+ + AG +IG G+ + +L+N
Sbjct: 467 FKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSF-------AAGRVIGKGGKTVNELQNL 519
Query: 172 SGATIVILAPNQLPLCASAHESDR-VVQISG 201
+ A +V+ P + E+D+ VV+I+G
Sbjct: 520 TSAEVVV------PRDQTPDENDQVVVKITG 544
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 46/278 (16%)
Query: 44 RAKAQ-DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISS 101
R K Q +V R++VP++ +G +IGKEG I+ I ++T++ I I A E+ I I S
Sbjct: 198 RPKPQSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHS 257
Query: 102 KDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMS 161
+ +A +I I++ + +++ ++ +++L + G LIG
Sbjct: 258 ------TPEGCSAACKIIMEIMQKEAQDTKFTEEIP-------LKILAHNNFVGRLIGKE 304
Query: 162 GQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENP 221
G+N++K+ + I I L L + +R + + G + A E+ ++RE+
Sbjct: 305 GRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEVMKKIRESY 360
Query: 222 PRQVISIS------PAYNYSAI------------RPAQPFVEPTSADYVTF--------- 254
+ +++ P N +A+ A TSA Y F
Sbjct: 361 ENDIAAMNLQAHLIPGLNLNALGLFPPSSSGMPPPSAGVSSPTTSASYPPFGQQPESETV 420
Query: 255 EMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKG 292
+ I VG +IG+ G +I ++ +GA IK+ +G
Sbjct: 421 HLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEG 458
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE-RVIIISSKDNDNVVSDAE 112
+ +P+ +G +IGK+G I+++ A+IKIA A + R++II+ +A+
Sbjct: 422 LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP------PEAQ 475
Query: 113 NALQQIAALILKDDDSNSEASKVA-AGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNS 171
Q LK+++ +V H+ + AG +IG G+ + +L+N
Sbjct: 476 FKAQGRIYGKLKEENFFGPKEEVKLEAHIK-------VPSYAAGRVIGKGGKTVNELQNL 528
Query: 172 SGATIVILAPNQLPLCASAHESDR-VVQISGDVPA 205
+ A +V+ P + E+D+ VV+I+G A
Sbjct: 529 TSAEVVV------PRDQTPDENDQVVVKITGHFYA 557
>sp|A7TT46|HEK2_VANPO Heterogeneous nuclear rnp K-like protein 2 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=HEK2 PE=3
SV=1
Length = 336
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 67/281 (23%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAE 112
R+++ ++ K+IG +G +IQK+R++ I I++ R +R++I + + D
Sbjct: 21 RLLLSLKEAAKIIGTKGTKIQKVRDDNNVKIGISERKERCSDRILICTGS-----IEDVS 75
Query: 113 NALQQIAALIL------KDDDSNSEASK-------------VAAGHVAANT--------- 144
NA+ I ++L D+DSN + + +A T
Sbjct: 76 NAIGDICEILLSEDVVTNDEDSNEKENDEYNSIEDEKFVYPFLNFRLAKPTLDEVNDAET 135
Query: 145 ------IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQ-LPLCASAHESDRVV 197
IR+L+ +Q +IG G I+ L + G + ++A NQ LP +R++
Sbjct: 136 LKKIINIRVLVTRAQCSAIIGTKGDRIKSLIENRG--VRMIASNQTLP-----DSDERLL 188
Query: 198 QISGDVPAVLNALVEIG----NQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADY-- 251
+I G A+ L +I N++R ++ Y R QP TS++
Sbjct: 189 EIQGTSMAITKVLEDINAVISNEVRATREKR-------YVPHVRRRNQPVSTNTSSNTGS 241
Query: 252 -VTFE------MLISESLVGGLIGRCGSNISRIRNESGAMI 285
+F+ + I E+ VG ++GR G+ I+ +R S I
Sbjct: 242 SKSFDEEFKSIVKIPEAYVGAIVGRQGNRIANLRKYSKTKI 282
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 28/199 (14%)
Query: 146 RLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPA 205
RLL++ +A +IG G I+K+R+ + I I + C SDR++ +G +
Sbjct: 21 RLLLSLKEAAKIIGTKGTKIQKVRDDNNVKIGI--SERKERC-----SDRILICTGSIED 73
Query: 206 VLNALVEIGNQL--------------RENPPRQVIS----ISPAYNYSAIRPAQPFVE-- 245
V NA+ +I L +EN I + P N+ +P V
Sbjct: 74 VSNAIGDICEILLSEDVVTNDEDSNEKENDEYNSIEDEKFVYPFLNFRLAKPTLDEVNDA 133
Query: 246 PTSADYVTFEMLISESLVGGLIGRCGSNI-SRIRNESGAMIKVYGGKGEQKHRHIQFGGS 304
T + +L++ + +IG G I S I N MI + R ++ G+
Sbjct: 134 ETLKKIINIRVLVTRAQCSAIIGTKGDRIKSLIENRGVRMIASNQTLPDSDERLLEIQGT 193
Query: 305 AQQVALAKQRVDEYIYSQL 323
+ + + ++ I +++
Sbjct: 194 SMAITKVLEDINAVISNEV 212
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 45 AKAQDVLFRIIV--PSRQIGKVIGKEGHRIQKIREETKATI---KIADAIARHEERVIII 99
+K+ D F+ IV P +G ++G++G+RI +R+ +K I K A ++ ER+ I
Sbjct: 242 SKSFDEEFKSIVKIPEAYVGAIVGRQGNRIANLRKYSKTKIVIEKRASEVSDDAERIFEI 301
Query: 100 SSKDNDNV 107
S D NV
Sbjct: 302 ISNDIKNV 309
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 50/280 (17%)
Query: 44 RAKAQ-DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISS 101
R K Q +V R++VP++ +G +IGKEG I+ I ++T++ I I A E+ I I S
Sbjct: 199 RPKPQTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHS 258
Query: 102 KDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMS 161
+ +A +I I++ + +++ ++ +++L + G LIG
Sbjct: 259 ------TPEGCSAACKIIMEIMQKEAQDTKFTEEIP-------LKILAHNNFVGRLIGKE 305
Query: 162 GQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENP 221
G+N++K+ + I I L L + +R + + G + A EI ++RE+
Sbjct: 306 GRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIEPCAKAEEEIMKKIRESY 361
Query: 222 PRQVISIS------PAYNYSAI-----------------------RPAQPFVEPTSADYV 252
+ +++ P N +A+ PF + ++
Sbjct: 362 ENDIAAMNLQAHLIPGLNLNALGLFPSSSSGMPPPSVGVPSPTSSTSYPPFGQQPESE-- 419
Query: 253 TFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKG 292
T + I VG +IG+ G +I ++ +GA IK+ +G
Sbjct: 420 TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEG 459
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE-RVIIISSKDNDNVVSDAE 112
+ +P+ +G +IGK+G I+++ A+IKIA A + R++II+ +A+
Sbjct: 423 LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP------PEAQ 476
Query: 113 NALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSS 172
Q LK+++ +V + + AG +IG G+ + +L+N +
Sbjct: 477 FKAQGRIYGKLKEENFFGPKEEVKL------ETHIKVPSYAAGRVIGKGGKTVNELQNLT 530
Query: 173 GATIVILAPNQLPLCASAHESDR-VVQISGDVPA 205
A +V+ P + E+D VV+I+G A
Sbjct: 531 SAEVVV------PRDQTPDENDEVVVKITGHFYA 558
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 24/207 (11%)
Query: 28 KRRREDGEIEGSDPKRRAKAQD--VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI 85
++R + E KR +D ++++PS G +IGK G I ++++ET ATIK+
Sbjct: 26 RKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 85
Query: 86 A---DAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSN---SEASKVAAGH 139
+ D ERV +I +A NA+ A +++ N +E +
Sbjct: 86 SKSKDFYPGTTERVCLIQG------TVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQ 139
Query: 140 VAANT-----IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESD 194
N +++++ S AG +IG G ++ + SGA + + +Q P + E
Sbjct: 140 TTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQE-- 194
Query: 195 RVVQISGDVPAVLNALVEIGNQLRENP 221
RVV +SG+ A+ I +++E+P
Sbjct: 195 RVVTVSGEPEQNRKAVELIIQKIQEDP 221
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 145 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVP 204
+++LI AG +IG GQ I +L+ +GATI + ++RV I G V
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF----YPGTTERVCLIQGTVE 107
Query: 205 AVLNAL-VEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLV 263
A LNA+ I ++RE P + V P S ++P Q V P V ++++ S
Sbjct: 108 A-LNAVHGFIAEKIREMP-QNVAKTEPV---SILQP-QTTVNPDRIKQV--KIIVPNSTA 159
Query: 264 GGLIGRCGSNISRIRNESGAMIKV 287
G +IG+ G+ + I +SGA +++
Sbjct: 160 GLIIGKGGATVKAIMEQSGAWVQL 183
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 24/207 (11%)
Query: 28 KRRREDGEIEGSDPKRRAKAQD--VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI 85
++R + E KR +D ++++PS G +IGK G I ++++ET ATIK+
Sbjct: 25 RKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 84
Query: 86 A---DAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSN---SEASKVAAGH 139
+ D ERV +I +A NA+ A +++ N +E +
Sbjct: 85 SKSKDFYPGTTERVCLIQG------TIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQ 138
Query: 140 VAANT-----IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESD 194
N +++++ S AG +IG G ++ + SGA + + +Q P + E
Sbjct: 139 TTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQE-- 193
Query: 195 RVVQISGDVPAVLNALVEIGNQLRENP 221
RVV +SG+ A+ I +++E+P
Sbjct: 194 RVVTVSGEPEQNRKAVELIIQKIQEDP 220
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 145 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVP 204
+++LI AG +IG GQ I +L+ +GATI + ++RV I G +
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF----YPGTTERVCLIQGTIE 106
Query: 205 AVLNAL-VEIGNQLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLV 263
A LNA+ I ++RE P + V P S ++P Q V P V ++++ S
Sbjct: 107 A-LNAVHGFIAEKIREMP-QNVAKTEPV---SILQP-QTTVNPDRIKQV--KIIVPNSTA 158
Query: 264 GGLIGRCGSNISRIRNESGAMIKV 287
G +IG+ G+ + I +SGA +++
Sbjct: 159 GLIIGKGGATVKAIMEQSGAWVQL 182
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 118/281 (41%), Gaps = 51/281 (18%)
Query: 43 RRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI--ADAIARHEERVIIIS 100
R+ DV R++VP++ +G +IGKEG I+ I ++T++ I I + E+ + I S
Sbjct: 190 RQKPQSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHS 249
Query: 101 SKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGM 160
+ + A + I ++ K+ ++ +++L + G LIG
Sbjct: 250 TPEG------CSTACKIIMEIMQKEAQDTKFTEEIP--------LKILAHNNFVGRLIGK 295
Query: 161 SGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLREN 220
G+N++K+ + I I L L + +R + + G + A EI ++RE+
Sbjct: 296 EGRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRES 351
Query: 221 PPRQVISIS------PAYNYSAI-----------------------RPAQPFVEPTSADY 251
+ +++ P N +A+ PF + ++
Sbjct: 352 YENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFGQQPESE- 410
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKG 292
T + I VG +IG+ G +I ++ +GA IK+ +G
Sbjct: 411 -TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEG 450
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 22/156 (14%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE-RVIIISSKDNDNVVSDAE 112
+ +P+ +G +IGK+G I+++ A+IKIA A + R++II+ +A+
Sbjct: 414 LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP------PEAQ 467
Query: 113 NALQQIAALILKDDDSNSEASKVA-AGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNS 171
Q LK+++ +V H+ + AG +IG G+ + +L+N
Sbjct: 468 FKAQGRIYGKLKEENFFGPKEEVKLEAHIK-------VPSYAAGRVIGKGGKTVNELQNL 520
Query: 172 SGATIVILAPNQLPLCASAHESDR-VVQISGDVPAV 206
+ A +V+ P + E+D+ VV+I+G A
Sbjct: 521 TSAEVVV------PRDQTPDENDQVVVKITGHFYAC 550
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 29/204 (14%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVV 108
DV R++ + ++G +G I +I+ ET A I I++ I ER++ +
Sbjct: 66 DVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRG-----TC 120
Query: 109 SDAENALQQIAALILKD--DDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIE 166
D A I +L++ ++ N E +++ I LLI GC+IG G +
Sbjct: 121 DDVAKAYGMIVRALLEEHGNEDNGEDIEIS--------INLLIPHHLMGCIIGKRGSRLR 172
Query: 167 KLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQL----RENPP 222
++ + S A + +PNQL L +DR++ I+G A+ A I L E+P
Sbjct: 173 EIEDLSAAKL-FASPNQLLL-----SNDRILTINGVPDAIHIATFYISQTLLNFQMESPQ 226
Query: 223 RQV---ISISPA-YNYSAIRPAQP 242
+ V I P +N I +QP
Sbjct: 227 KNVKRSIYYQPTQFNSVLIDHSQP 250
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%)
Query: 33 DGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARH 92
DG + P V I + + +G VIGK+G I ++E T +I I D +
Sbjct: 314 DGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGS 373
Query: 93 EERVIII 99
ER + I
Sbjct: 374 SERRLTI 380
>sp|Q6CNI6|HEK2_KLULA Heterogeneous nuclear rnp K-like protein 2 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=HEK2 PE=3 SV=1
Length = 383
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 118/305 (38%), Gaps = 51/305 (16%)
Query: 32 EDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIAR 91
E EI + ++ F ++V ++ K+IG +G+ I+ IR E I I+
Sbjct: 41 EVNEINNDTNSQVNNGNNITFHVLVSLKEAAKIIGPQGNTIETIRRENDIKIGISPREKS 100
Query: 92 HEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANT------- 144
+R++ +S N+L Q+ ++ D + K + +
Sbjct: 101 CSDRLLNVSGPP-----RQVANSLGQVLRVLTTDYEPEEHVFKHLRFMLPPASKEEIEDP 155
Query: 145 --------IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAH----E 192
+RL+ Q +IG G I+KL + + + L AS H
Sbjct: 156 EKWKQIGNLRLICTNPQISSVIGQQGAKIKKL----------IETHTVKLVASKHFLPDS 205
Query: 193 SDRVVQISGDVPAVLNALVEIGNQLREN----PPRQVISISPAYNYSAIRPAQPFVEPTS 248
DRV++I G +V N + EI ++ PPR + P Y P + T
Sbjct: 206 KDRVLEIQGFPTSVANCINEIAELFIQDDVHVPPRTL----PRY--------YPHSKHTK 253
Query: 249 ADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHIQFGGSAQQ- 307
V+ + I + VG L+G G+ I+ +R + I + E R G+ Q+
Sbjct: 254 EIQVSQTLAIPKEFVGALLGVGGNRIANLRKFTKTKIVIGQDPTENGDRIFTVWGNDQKS 313
Query: 308 VALAK 312
V LA+
Sbjct: 314 VKLAQ 318
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 29/267 (10%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP +G +IG+ G +I +I++E+ I+IA ER +++ V A+ L
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTG--TPESVQSAKRLL 164
Query: 116 QQIAALILKDDDSNSEASKVAAGHVAANTIR-LLIAGSQAGCLIGMSGQNIEKLRNSSGA 174
QI + A G N ++ ++I S+AG +IG G+ I++L+ +G
Sbjct: 165 DQIV-------EKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGV 217
Query: 175 TIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNY 234
+V++ P A D+ ++I+GD V A + +R+
Sbjct: 218 KMVMI--QDGPQNTGA---DKPLRITGDPYKVQQAKEMVLELIRDQ-------------- 258
Query: 235 SAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQ 294
R + ++ I VG +IGR G I +I+N++G I+ G
Sbjct: 259 GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTT 318
Query: 295 KHRHIQFGGSAQQVALAKQRVDEYIYS 321
R Q G + A + + + + S
Sbjct: 319 PERIAQITGPPDRCQHAAEIITDLLRS 345
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 242 PFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHIQF 301
P + S +T E + + +VG +IGR G ISRI+ ESG I++ G R
Sbjct: 91 PMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCML 150
Query: 302 GGSAQQVALAKQRVDEYI 319
G+ + V AK+ +D+ +
Sbjct: 151 TGTPESVQSAKRLLDQIV 168
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 110/278 (39%), Gaps = 32/278 (11%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNV-----V 108
I++P+ + G VIGK G I++++E +A +K+ V+I N +
Sbjct: 190 IMIPASKAGLVIGKGGETIKQLQE--RAGVKM----------VMIQDGPQNTGADKPLRI 237
Query: 109 SDAENALQQIAALIL---KDDDSNSEASKVAAGHVAANT-IRLLIAGSQAGCLIGMSGQN 164
+ +QQ ++L +D E + N I + I G +IG +G+
Sbjct: 238 TGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEM 297
Query: 165 IEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQ 224
I+K++N +G I P+ +R+ QI+G +A I + LR
Sbjct: 298 IKKIQNDAGVRIQ-FKPD------DGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGN 350
Query: 225 VISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAM 284
P + P F ++ G +IG+ G I I +SGA
Sbjct: 351 PGGPGPGGRGRGRGQGNWNMGPPGG-LQEFNFIVPTGKTGLIIGKGGETIKSISQQSGAR 409
Query: 285 IKVYGGKGEQKHRHIQFG---GSAQQVALAKQRVDEYI 319
I++ +++ G+ QQ+ A+Q ++E I
Sbjct: 410 IELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
>sp|Q756R8|HEK2_ASHGO Heterogeneous nuclear rnp K-like protein 2 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=HEK2 PE=3 SV=1
Length = 316
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 114/281 (40%), Gaps = 45/281 (16%)
Query: 59 RQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENALQQI 118
++ +++G+ G+ I IR+ I I+ +R++ ++ + N+L +
Sbjct: 42 KEAARILGRGGNTIDNIRKANGVKIGISTKEKSCSDRLLEVTGS-----IDAVANSLADV 96
Query: 119 AALILKDDDSNSEASKVAAGHVAAN-----------------------TIRLLIAGSQAG 155
++ DD + +A H+ + +RL++ SQ
Sbjct: 97 VKVLTADDTNEEDAEPEPEQHIFKHLNFILPPPSPDEAEDPMKVKQIGNLRLIVTNSQVS 156
Query: 156 CLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGN 215
+IG +G I+KL ++ + +V+ + LP DR+++I G ++ N + +I
Sbjct: 157 SIIGTAGSKIKKLIDTHSSKLVV-SKTFLP-----DSQDRILEIQGFPNSIANCIKDISQ 210
Query: 216 QLRENPPRQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNIS 275
L ++ V+ Y P + + +VT + I VG L+G G+ I+
Sbjct: 211 TLIKD---DVLDTKEKRYY-------PHSKHSKDIHVTATVAIPAEYVGALLGHGGNRIA 260
Query: 276 RIRNESGAMIKVYGGKGEQKHRHIQFGGSAQQ-VALAKQRV 315
+R + I V + R G+ Q+ V LA+ +
Sbjct: 261 NLRKYTRTKITVAQEPNQNNEREFTITGNDQKSVKLAQNMI 301
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 43 RRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSK 102
+ +K V + +P+ +G ++G G+RI +R+ T+ I +A ++ ER I+
Sbjct: 230 KHSKDIHVTATVAIPAEYVGALLGHGGNRIANLRKYTRTKITVAQEPNQNNEREFTITGN 289
Query: 103 DNDNV 107
D +V
Sbjct: 290 DQKSV 294
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 29/267 (10%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP +G +IG+ G +I +I++E+ I+IA ER +++ V A+ L
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTG--TPESVQSAKRLL 160
Query: 116 QQIAALILKDDDSNSEASKVAAGHVAANTIR-LLIAGSQAGCLIGMSGQNIEKLRNSSGA 174
QI + A G N ++ ++I S+AG +IG G+ I++L+ +G
Sbjct: 161 DQIV-------EKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGV 213
Query: 175 TIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNY 234
+V++ P A D+ ++I+GD V A + +R+
Sbjct: 214 KMVMI--QDGPQNTGA---DKPLRITGDPYKVQQAKEMVLELIRDQ-------------- 254
Query: 235 SAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQ 294
R + ++ I VG +IGR G I +I+N++G I+ G
Sbjct: 255 GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTT 314
Query: 295 KHRHIQFGGSAQQVALAKQRVDEYIYS 321
R Q G + A + + + + S
Sbjct: 315 PDRIAQITGPPDRCQHAAEIITDLLRS 341
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 242 PFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHIQF 301
P + S +T E + + +VG +IGR G ISRI+ ESG I++ G R
Sbjct: 87 PMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCML 146
Query: 302 GGSAQQVALAKQRVDEYI 319
G+ + V AK+ +D+ +
Sbjct: 147 TGTPESVQSAKRLLDQIV 164
Score = 38.5 bits (88), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 109/278 (39%), Gaps = 32/278 (11%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNV-----V 108
I++P+ + G VIGK G I++++E +A +K+ V+I N +
Sbjct: 186 IMIPASKAGLVIGKGGETIKQLQE--RAGVKM----------VMIQDGPQNTGADKPLRI 233
Query: 109 SDAENALQQIAALIL---KDDDSNSEASKVAAGHVAANT-IRLLIAGSQAGCLIGMSGQN 164
+ +QQ ++L +D E + N I + I G +IG +G+
Sbjct: 234 TGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEM 293
Query: 165 IEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQ 224
I+K++N +G I P+ DR+ QI+G +A I + LR
Sbjct: 294 IKKIQNDAGVRIQ-FKPD------DGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGN 346
Query: 225 VISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAM 284
P + P F ++ G +IG+ G I I +SGA
Sbjct: 347 PGGPGPGGRGRGRGQGNWNMGPPGG-LQEFNFIVPTGKTGLIIGKGGETIKSISQQSGAR 405
Query: 285 IKVYGG---KGEQKHRHIQFGGSAQQVALAKQRVDEYI 319
I++ + + G+ QQ+ A+Q ++E I
Sbjct: 406 IELQRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 443
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 29/267 (10%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP +G +IG+ G +I +I++E+ I+IA ER +++ V A+ L
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTG--TPESVQSAKRLL 159
Query: 116 QQIAALILKDDDSNSEASKVAAGHVAANTIR-LLIAGSQAGCLIGMSGQNIEKLRNSSGA 174
QI + A G N ++ ++I S+AG +IG G+ I++L+ +G
Sbjct: 160 DQIV-------EKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGV 212
Query: 175 TIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISISPAYNY 234
+V++ P A D+ ++I+GD V A + +R+
Sbjct: 213 KMVMI--QDGPQNTGA---DKPLRITGDPYKVQQAKEMVLELIRDQ-------------- 253
Query: 235 SAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQ 294
R + ++ I VG +IGR G I +I+N++G I+ G
Sbjct: 254 GGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTT 313
Query: 295 KHRHIQFGGSAQQVALAKQRVDEYIYS 321
R Q G + A + + + + S
Sbjct: 314 PDRIAQITGPPDRCQHAAEIITDLLRS 340
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 252 VTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHIQFGGSAQQVALA 311
+T E + + +VG +IGR G ISRI+ ESG I++ G R G+ + V A
Sbjct: 96 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSA 155
Query: 312 KQRVDEYI 319
K+ +D+ +
Sbjct: 156 KRLLDQIV 163
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 110/278 (39%), Gaps = 32/278 (11%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNV-----V 108
I++P+ + G VIGK G I++++E +A +K+ V+I N +
Sbjct: 185 IMIPASKAGLVIGKGGETIKQLQE--RAGVKM----------VMIQDGPQNTGADKPLRI 232
Query: 109 SDAENALQQIAALIL---KDDDSNSEASKVAAGHVAANT-IRLLIAGSQAGCLIGMSGQN 164
+ +QQ ++L +D E + N I + I G +IG +G+
Sbjct: 233 TGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEM 292
Query: 165 IEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQ 224
I+K++N +G I P+ DR+ QI+G +A I + LR
Sbjct: 293 IKKIQNDAGVRIQ-FKPD------DGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGN 345
Query: 225 VISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAM 284
P + P F ++ G +IG+ G I I +SGA
Sbjct: 346 PGGPGPGGRGRGRGQGNWNMGPPGG-LQEFNFIVPTGKTGLIIGKGGETIKSISQQSGAR 404
Query: 285 IKVYGGKGEQKHRHIQFG---GSAQQVALAKQRVDEYI 319
I++ +++ G+ QQ+ A+Q ++E I
Sbjct: 405 IELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 442
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 37/251 (14%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP +G +IG+ G +I KI++++ ++I+ ER + ++ + A+
Sbjct: 215 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTG---------SPEAV 265
Query: 116 QQIAALILKDDDSNSEASKVAAGHVAAN----TIR-LLIAGSQAGCLIGMSGQNIEKLRN 170
Q+ A L+L D S H AN T++ ++I +AG +IG G+ I++L+
Sbjct: 266 QK-AKLMLDDIVSRGRGGPPGQFHDYANGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQE 324
Query: 171 SSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISISP 230
+G ++ + + D+ ++I GD V A + + LRE R
Sbjct: 325 RAGVKMIFIQDG-----SQNTNVDKPLRIIGDPYKVQQACEMVMDILRE---RDQGGFGD 376
Query: 231 AYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVY-- 288
Y S ++ + VG +IGR G I +I+N++G I+
Sbjct: 377 RNEYG------------SRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQD 424
Query: 289 GGKGEQKHRHI 299
G G +K HI
Sbjct: 425 DGTGPEKIAHI 435
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 235 SAIRPAQ--PFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKG 292
SA P Q P P + VT E + + +VG +IGR G I++I+ +SG +++ G
Sbjct: 190 SAALPPQLGPMHPPPRSTTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSG 249
Query: 293 EQKHRHIQFGGSAQQVALAKQRVDEYI 319
R + GS + V AK +D+ +
Sbjct: 250 GLPERSVSLTGSPEAVQKAKLMLDDIV 276
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 20/131 (15%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNV------ 107
I++P+ + G VIGK G I++++E +A +K+ + I N NV
Sbjct: 301 IMIPAGKAGLVIGKGGETIKQLQE--RAGVKM----------IFIQDGSQNTNVDKPLRI 348
Query: 108 VSDAENALQ--QIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNI 165
+ D Q ++ IL++ D + G I + + G +IG SG+ I
Sbjct: 349 IGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMI 408
Query: 166 EKLRNSSGATI 176
+K++N +G I
Sbjct: 409 KKIQNDAGVRI 419
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 38/252 (15%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP +G +IG+ G +I KI++++ ++I+ ER + ++ A ++
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTG---------APESV 201
Query: 116 QQIAALILKDDDSNSEASKVAAGHVAAN-----TIR-LLIAGSQAGCLIGMSGQNIEKLR 169
Q+ A ++L D S H AN T++ ++I +AG +IG G+ I++L+
Sbjct: 202 QK-AKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQ 260
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISIS 229
+G ++++ + D+ ++I GD V A + + LRE R
Sbjct: 261 ERAGVKMILIQDG-----SQNTNVDKPLRIIGDPYKVQQACEMVMDILRE---RDQGGFG 312
Query: 230 PAYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVY- 288
Y S ++ + VG +IGR G I +I+N++G I+
Sbjct: 313 DRNEYG------------SRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQ 360
Query: 289 -GGKGEQKHRHI 299
G G +K HI
Sbjct: 361 DDGTGPEKIAHI 372
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 36/280 (12%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNV------ 107
I++P+ + G VIGK G I++++E +A +K+ ++I N NV
Sbjct: 238 IMIPAGKAGLVIGKGGETIKQLQE--RAGVKM----------ILIQDGSQNTNVDKPLRI 285
Query: 108 VSDAENALQ--QIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNI 165
+ D Q ++ IL++ D + G I + + G +IG SG+ I
Sbjct: 286 IGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMI 345
Query: 166 EKLRNSSGATIVILAPNQLPLCASAH---ESDRVVQISGDVPAVLNALVEIGNQLRENPP 222
+K++N +G I + AH DR + ++N L++ LR PP
Sbjct: 346 KKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAA----RIINDLLQ---SLRSGPP 398
Query: 223 RQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESG 282
Q P + +TF I G +IGR G N+ I ++G
Sbjct: 399 GPPGGPGMPPGGRGRGRGQGNWGPPGGE-MTFS--IPTHKCGLVIGRGGENVKAINQQTG 455
Query: 283 AMIKV---YGGKGEQKHRHIQFGGSAQQVALAKQRVDEYI 319
A +++ G+ + GS QQ+ AKQ ++E I
Sbjct: 456 AFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 244 VEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHIQFGG 303
+ P +T E + + +VG +IGR G I++I+ +SG +++ G R + G
Sbjct: 137 IHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTG 196
Query: 304 SAQQVALAKQRVDEYI 319
+ + V AK +D+ +
Sbjct: 197 APESVQKAKMMLDDIV 212
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 38/252 (15%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP +G +IG+ G +I KI++++ ++I+ ER + ++ A ++
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTG---------APESV 202
Query: 116 QQIAALILKDDDSNSEASKVAAGHVAAN-----TIR-LLIAGSQAGCLIGMSGQNIEKLR 169
Q+ A ++L D S H AN T++ ++I +AG +IG G+ I++L+
Sbjct: 203 QK-AKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQ 261
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVISIS 229
+G ++++ + D+ ++I GD V A + + LRE R
Sbjct: 262 ERAGVKMILIQDG-----SQNTNVDKPLRIIGDPYKVQQACEMVMDILRE---RDQGGFG 313
Query: 230 PAYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVY- 288
Y S ++ + VG +IGR G I +I+N++G I+
Sbjct: 314 DRNEYG------------SRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQ 361
Query: 289 -GGKGEQKHRHI 299
G G +K HI
Sbjct: 362 DDGTGPEKIAHI 373
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 36/280 (12%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNV------ 107
I++P+ + G VIGK G I++++E +A +K+ ++I N NV
Sbjct: 239 IMIPAGKAGLVIGKGGETIKQLQE--RAGVKM----------ILIQDGSQNTNVDKPLRI 286
Query: 108 VSDAENALQ--QIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNI 165
+ D Q ++ IL++ D + G I + + G +IG SG+ I
Sbjct: 287 IGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMI 346
Query: 166 EKLRNSSGATIVILAPNQLPLCASAH---ESDRVVQISGDVPAVLNALVEIGNQLRENPP 222
+K++N +G I + AH DR + ++N L++ LR PP
Sbjct: 347 KKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAA----RIINDLLQ---SLRSGPP 399
Query: 223 RQVISISPAYNYSAIRPAQPFVEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESG 282
+ Q P + +TF I G +IGR G N+ I ++G
Sbjct: 400 GPPGAPGMPPGGRGRGRGQGNWGPPGGE-MTFS--IPTHKCGLVIGRGGENVKAINQQTG 456
Query: 283 AMIKV---YGGKGEQKHRHIQFGGSAQQVALAKQRVDEYI 319
A +++ G+ + GS QQ+ AKQ ++E I
Sbjct: 457 AFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQLIEEKI 496
Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 244 VEPTSADYVTFEMLISESLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRHIQFGG 303
+ P +T E + + +VG +IGR G I++I+ +SG +++ G R + G
Sbjct: 138 IHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTG 197
Query: 304 SAQQVALAKQRVDEYI 319
+ + V AK +D+ +
Sbjct: 198 APESVQKAKMMLDDIV 213
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,717,974
Number of Sequences: 539616
Number of extensions: 4661902
Number of successful extensions: 14441
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 242
Number of HSP's that attempted gapping in prelim test: 13375
Number of HSP's gapped (non-prelim): 1123
length of query: 330
length of database: 191,569,459
effective HSP length: 118
effective length of query: 212
effective length of database: 127,894,771
effective search space: 27113691452
effective search space used: 27113691452
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)