Query 020186
Match_columns 329
No_of_seqs 162 out of 1078
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 07:43:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020186.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020186hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0044 PyrC Dihydroorotase an 100.0 1.7E-74 3.7E-79 561.6 30.0 308 3-328 73-411 (430)
2 PRK07369 dihydroorotase; Provi 100.0 9.9E-74 2.1E-78 558.6 31.9 307 3-328 77-415 (418)
3 cd01294 DHOase Dihydroorotase 100.0 1.1E-70 2.3E-75 523.8 33.4 311 3-323 19-334 (335)
4 PRK09059 dihydroorotase; Valid 100.0 2.4E-70 5.2E-75 536.6 31.5 308 3-328 80-418 (429)
5 TIGR00856 pyrC_dimer dihydroor 100.0 1.8E-69 4E-74 515.2 35.1 309 14-327 30-341 (341)
6 cd01302 Cyclic_amidohydrolases 100.0 8.6E-69 1.9E-73 511.0 28.8 295 3-328 26-336 (337)
7 cd01316 CAD_DHOase The eukaryo 100.0 1.4E-68 3.1E-73 509.3 28.8 293 3-328 26-323 (344)
8 cd01318 DHOase_IIb Dihydroorot 100.0 2.6E-68 5.7E-73 511.6 30.1 304 3-328 26-356 (361)
9 PRK01211 dihydroorotase; Provi 100.0 2.4E-68 5.2E-73 518.3 26.1 289 3-328 66-380 (409)
10 PRK07627 dihydroorotase; Provi 100.0 2.4E-67 5.1E-72 514.9 31.3 308 3-328 75-413 (425)
11 PRK05451 dihydroorotase; Provi 100.0 2.5E-66 5.4E-71 495.2 35.1 310 14-327 33-344 (345)
12 PLN02599 dihydroorotase 100.0 3.1E-66 6.8E-71 494.8 34.8 316 10-327 47-363 (364)
13 PRK08044 allantoinase; Provisi 100.0 6E-67 1.3E-71 515.7 29.8 313 3-328 73-424 (449)
14 PRK08417 dihydroorotase; Provi 100.0 6.3E-66 1.4E-70 499.6 30.0 296 3-328 49-376 (386)
15 PLN02795 allantoinase 100.0 6.9E-66 1.5E-70 514.1 29.3 314 4-328 120-479 (505)
16 PRK04250 dihydroorotase; Provi 100.0 4E-64 8.6E-69 488.1 29.1 295 3-328 67-375 (398)
17 PRK00369 pyrC dihydroorotase; 100.0 5.5E-64 1.2E-68 485.3 27.4 281 3-328 67-363 (392)
18 PRK13404 dihydropyrimidinase; 100.0 7.8E-63 1.7E-67 489.7 29.4 312 4-328 78-435 (477)
19 PRK06189 allantoinase; Provisi 100.0 1.7E-62 3.8E-67 484.7 29.4 312 3-328 74-422 (451)
20 PRK09060 dihydroorotase; Valid 100.0 5.5E-62 1.2E-66 479.9 30.5 307 3-328 76-413 (444)
21 cd01317 DHOase_IIa Dihydroorot 100.0 9.9E-62 2.2E-66 468.7 31.5 309 3-329 34-374 (374)
22 PRK07575 dihydroorotase; Provi 100.0 1.4E-61 3.1E-66 476.4 30.0 305 4-328 77-411 (438)
23 TIGR00857 pyrC_multi dihydroor 100.0 4.7E-61 1E-65 469.3 31.5 309 4-328 60-400 (411)
24 PRK02382 dihydroorotase; Provi 100.0 3.1E-60 6.7E-65 467.7 28.4 304 3-327 74-408 (443)
25 TIGR03178 allantoinase allanto 100.0 1.2E-58 2.6E-63 456.4 29.2 311 4-328 72-419 (443)
26 PRK09236 dihydroorotase; Revie 100.0 9.7E-57 2.1E-61 442.9 28.8 307 4-328 75-417 (444)
27 PLN02942 dihydropyrimidinase 100.0 4.2E-56 9.1E-61 442.7 27.7 312 3-328 79-432 (486)
28 PRK09357 pyrC dihydroorotase; 100.0 3E-55 6.6E-60 429.8 31.0 306 5-328 75-412 (423)
29 KOG2584 Dihydroorotase and rel 100.0 3.5E-57 7.5E-62 422.4 15.8 313 4-327 89-443 (522)
30 cd01315 L-HYD_ALN L-Hydantoina 100.0 1E-54 2.2E-59 428.8 30.6 310 5-328 74-423 (447)
31 cd01314 D-HYD D-hydantoinases 100.0 1.6E-53 3.4E-58 420.4 28.1 313 4-328 74-426 (447)
32 PRK08323 phenylhydantoinase; V 100.0 4.2E-53 9.1E-58 418.6 27.5 312 5-328 73-426 (459)
33 TIGR02033 D-hydantoinase D-hyd 100.0 5.4E-53 1.2E-57 417.0 26.9 313 4-328 74-428 (454)
34 COG0418 PyrC Dihydroorotase [N 100.0 1.5E-41 3.1E-46 306.1 31.9 312 14-327 33-344 (344)
35 KOG2902 Dihydroorotase [Nucleo 100.0 1.3E-35 2.8E-40 259.8 26.0 313 8-327 28-343 (344)
36 PRK09061 D-glutamate deacylase 100.0 1.7E-36 3.7E-41 303.0 23.4 287 7-320 86-478 (509)
37 cd01297 D-aminoacylase D-amino 100.0 2.8E-33 6.1E-38 273.9 20.0 241 4-297 69-372 (415)
38 TIGR02318 phosphono_phnM phosp 99.9 3.4E-26 7.4E-31 221.0 16.8 251 4-298 77-358 (376)
39 PRK15446 phosphonate metabolis 99.9 1.8E-25 3.9E-30 216.5 14.5 255 3-299 80-363 (383)
40 cd01308 Isoaspartyl-dipeptidas 99.8 2.6E-17 5.6E-22 159.7 19.9 168 130-302 167-364 (387)
41 PRK10657 isoaspartyl dipeptida 99.7 2.2E-16 4.8E-21 153.1 19.4 165 131-301 170-364 (388)
42 PRK12394 putative metallo-depe 99.6 3E-14 6.5E-19 138.1 22.8 242 5-301 75-345 (379)
43 PRK13206 ureC urease subunit a 99.6 1.1E-13 2.4E-18 138.1 19.2 241 8-298 151-443 (573)
44 cd00375 Urease_alpha Urease al 99.6 1.9E-13 4.2E-18 135.9 18.6 137 7-171 144-290 (567)
45 PRK13985 ureB urease subunit b 99.5 1.5E-13 3.3E-18 136.2 16.9 241 7-297 144-437 (568)
46 PRK13308 ureC urease subunit a 99.5 5.1E-13 1.1E-17 132.9 19.4 133 8-169 149-291 (569)
47 cd01307 Met_dep_hydrolase_B Me 99.5 1.6E-12 3.5E-17 124.0 22.2 240 4-303 52-323 (338)
48 PRK13309 ureC urease subunit a 99.5 1.9E-12 4.1E-17 129.8 20.9 246 7-297 148-441 (572)
49 PRK13207 ureC urease subunit a 99.5 2.5E-12 5.4E-17 128.7 20.4 135 7-169 144-291 (568)
50 cd01292 metallo-dependent_hydr 99.5 4.2E-12 9.2E-17 115.1 18.8 225 5-283 39-275 (275)
51 TIGR01178 ade adenine deaminas 99.4 1.7E-11 3.6E-16 124.0 21.1 227 7-302 70-320 (552)
52 cd01298 ATZ_TRZ_like TRZ/ATZ f 99.4 5E-11 1.1E-15 115.9 19.8 196 79-320 178-393 (411)
53 PRK07583 cytosine deaminase-li 99.3 6.1E-11 1.3E-15 117.1 18.9 247 5-297 126-397 (438)
54 PRK09237 dihydroorotase; Provi 99.3 9E-10 1.9E-14 106.8 23.5 233 5-297 72-333 (380)
55 PRK07228 N-ethylammeline chlor 99.2 1.8E-10 3.8E-15 114.0 14.2 155 100-297 199-375 (445)
56 cd01295 AdeC Adenine deaminase 99.2 4.5E-09 9.7E-14 103.4 22.7 224 6-297 28-272 (422)
57 TIGR01792 urease_alph urease, 99.2 2.8E-10 6.1E-15 114.2 14.2 138 7-172 143-290 (567)
58 PF13147 Amidohydro_4: Amidohy 99.2 8.6E-11 1.9E-15 107.5 9.6 244 6-294 36-304 (304)
59 TIGR01975 isoAsp_dipep isoaspa 99.1 2.2E-08 4.8E-13 97.4 20.9 247 7-299 83-363 (389)
60 cd01306 PhnM PhnM is believed 99.0 8.3E-08 1.8E-12 91.1 23.5 251 9-298 36-311 (325)
61 cd01299 Met_dep_hydrolase_A Me 99.0 1E-08 2.2E-13 97.7 17.4 188 65-297 123-332 (342)
62 PF12890 DHOase: Dihydro-orota 99.0 1.8E-10 4E-15 93.2 4.3 72 88-163 55-142 (142)
63 PLN02303 urease 99.0 2.1E-09 4.5E-14 110.9 11.6 99 9-123 415-520 (837)
64 cd01300 YtcJ_like YtcJ_like me 99.0 2.4E-08 5.2E-13 99.7 19.0 167 100-295 295-479 (479)
65 TIGR03583 EF_0837 probable ami 98.7 3.7E-06 8E-11 81.1 22.7 42 256-297 281-330 (365)
66 cd01296 Imidazolone-5PH Imidaz 98.7 2.4E-06 5.1E-11 82.4 20.5 159 77-297 178-348 (371)
67 cd01304 FMDH_A Formylmethanofu 98.5 1.4E-05 2.9E-10 80.2 20.9 44 266-309 426-477 (541)
68 cd00854 NagA N-acetylglucosami 98.5 1.8E-06 3.9E-11 83.7 13.7 243 5-303 76-368 (374)
69 PF01979 Amidohydro_1: Amidohy 98.4 2.4E-07 5.1E-12 87.2 3.4 111 181-297 193-333 (333)
70 cd01310 TatD_DNAse TatD like p 98.3 7.4E-05 1.6E-09 67.6 17.7 141 100-285 108-251 (251)
71 TIGR01224 hutI imidazoloneprop 98.2 0.00038 8.2E-09 67.2 21.8 145 100-297 197-352 (377)
72 PRK08393 N-ethylammeline chlor 98.2 0.00053 1.1E-08 67.6 23.1 177 100-319 189-386 (424)
73 PRK09356 imidazolonepropionase 98.2 2.2E-05 4.8E-10 76.7 13.0 65 218-297 304-378 (406)
74 PRK08203 hydroxydechloroatrazi 98.2 0.00023 4.9E-09 70.7 19.8 155 100-297 214-388 (451)
75 PF07969 Amidohydro_3: Amidohy 98.2 1.9E-05 4.1E-10 76.8 11.7 240 7-295 136-404 (404)
76 COG1574 Predicted metal-depend 98.1 0.00014 3.1E-09 73.3 17.0 195 93-323 315-532 (535)
77 TIGR00221 nagA N-acetylglucosa 98.1 4.1E-05 9E-10 74.4 12.8 51 5-56 81-131 (380)
78 PRK07572 cytosine deaminase; V 98.0 0.00089 1.9E-08 66.0 19.4 245 7-297 104-376 (426)
79 PF04909 Amidohydro_2: Amidohy 97.9 0.00011 2.5E-09 66.8 11.4 179 65-286 87-273 (273)
80 PRK06687 chlorohydrolase; Vali 97.9 0.0012 2.6E-08 64.8 18.6 233 9-297 111-372 (419)
81 TIGR02967 guan_deamin guanine 97.9 0.0042 9E-08 60.6 22.2 155 100-297 186-361 (401)
82 TIGR03121 one_C_dehyd_A formyl 97.9 0.0015 3.2E-08 66.1 19.0 33 265-297 428-467 (556)
83 cd01309 Met_dep_hydrolase_C Me 97.8 0.00042 9.2E-09 66.8 14.5 136 114-297 193-338 (359)
84 PRK11170 nagA N-acetylglucosam 97.8 0.00034 7.4E-09 68.1 13.8 48 7-56 84-131 (382)
85 COG3964 Predicted amidohydrola 97.8 0.0029 6.3E-08 58.6 18.8 229 10-296 81-336 (386)
86 PRK05985 cytosine deaminase; P 97.8 0.0013 2.7E-08 64.1 17.7 233 7-297 104-363 (391)
87 PRK09230 cytosine deaminase; P 97.8 0.0054 1.2E-07 60.6 21.5 168 100-297 195-380 (426)
88 PRK10027 cryptic adenine deami 97.8 0.0024 5.1E-08 65.5 19.3 221 7-297 104-347 (588)
89 PRK08204 hypothetical protein; 97.6 0.0071 1.5E-07 59.9 20.0 155 100-297 201-380 (449)
90 PRK12393 amidohydrolase; Provi 97.6 0.053 1.1E-06 54.0 24.8 154 100-297 218-392 (457)
91 COG2159 Predicted metal-depend 97.5 0.0051 1.1E-07 57.8 16.3 169 65-287 115-291 (293)
92 cd01293 Bact_CD Bacterial cyto 97.5 0.0088 1.9E-07 57.7 18.5 167 100-297 189-374 (398)
93 cd00530 PTE Phosphotriesterase 97.5 0.013 2.8E-07 54.6 18.9 156 100-284 136-293 (293)
94 PRK09228 guanine deaminase; Pr 97.5 0.053 1.1E-06 53.7 23.2 154 100-297 211-386 (433)
95 PRK09045 N-ethylammeline chlor 97.4 0.013 2.9E-07 58.0 18.9 155 100-297 202-378 (443)
96 PRK14085 imidazolonepropionase 97.4 0.0027 5.9E-08 61.6 13.3 145 100-298 207-362 (382)
97 COG3454 Metal-dependent hydrol 97.3 0.00038 8.3E-09 64.9 5.8 64 214-296 285-357 (377)
98 COG1228 HutI Imidazolonepropio 97.3 0.0079 1.7E-07 59.0 14.7 141 100-296 220-373 (406)
99 PRK07203 putative chlorohydrol 97.2 0.089 1.9E-06 52.1 21.9 152 100-297 205-378 (442)
100 TIGR00010 hydrolase, TatD fami 97.2 0.029 6.3E-07 50.6 16.6 143 100-286 108-252 (252)
101 PRK06380 metal-dependent hydro 97.0 0.16 3.6E-06 49.7 21.0 159 100-297 186-361 (418)
102 PRK15493 5-methylthioadenosine 96.9 0.057 1.2E-06 53.4 17.1 161 100-303 197-380 (435)
103 PRK06151 N-ethylammeline chlor 96.9 0.02 4.4E-07 57.5 14.0 152 100-297 221-401 (488)
104 PRK06886 hypothetical protein; 96.8 0.15 3.2E-06 48.7 18.4 237 7-287 75-328 (329)
105 cd01313 Met_dep_hydrolase_E Me 96.6 0.11 2.3E-06 51.2 16.1 151 100-297 207-383 (418)
106 PRK07213 chlorohydrolase; Prov 96.6 0.13 2.8E-06 49.8 16.5 152 100-298 179-344 (375)
107 TIGR03314 Se_ssnA putative sel 96.4 0.69 1.5E-05 45.9 20.9 160 100-307 204-389 (441)
108 cd01311 PDC_hydrolase 2-pyrone 96.4 0.79 1.7E-05 42.0 22.2 97 64-182 82-187 (263)
109 PRK06038 N-ethylammeline chlor 96.3 0.27 5.9E-06 48.5 17.3 154 100-297 190-364 (430)
110 PRK09875 putative hydrolase; P 96.3 0.088 1.9E-06 49.4 12.8 148 100-285 139-292 (292)
111 cd01303 GDEase Guanine deamina 96.2 0.29 6.2E-06 48.3 16.7 154 100-297 208-389 (429)
112 PRK06846 putative deaminase; V 96.0 1 2.2E-05 44.1 19.3 23 100-122 206-228 (410)
113 PRK10812 putative DNAse; Provi 95.9 0.69 1.5E-05 42.7 16.9 68 214-287 187-257 (265)
114 cd01308 Isoaspartyl-dipeptidas 95.6 0.052 1.1E-06 52.6 8.4 157 7-184 81-255 (387)
115 cd01312 Met_dep_hydrolase_D Me 95.6 0.85 1.8E-05 44.3 16.8 152 100-297 163-352 (381)
116 cd01305 archeal_chlorohydrolas 95.5 1.5 3.4E-05 39.9 17.4 136 102-283 127-263 (263)
117 cd01320 ADA Adenosine deaminas 95.2 2.8 6E-05 39.6 19.7 139 100-286 173-313 (325)
118 PF01026 TatD_DNase: TatD rela 94.9 0.25 5.5E-06 45.1 10.2 137 100-285 111-255 (255)
119 TIGR02022 hutF formiminoglutam 94.6 2.1 4.5E-05 42.7 16.8 151 100-297 216-393 (455)
120 PRK09229 N-formimino-L-glutama 94.6 2.1 4.4E-05 42.6 16.7 152 100-298 216-394 (456)
121 PRK11449 putative deoxyribonuc 94.5 0.61 1.3E-05 42.9 11.8 139 100-286 114-258 (258)
122 COG1001 AdeC Adenine deaminase 94.0 2.3 4.9E-05 43.3 15.3 107 6-121 96-210 (584)
123 PRK08418 chlorohydrolase; Prov 93.7 4.7 0.0001 39.5 16.9 154 100-298 190-376 (408)
124 COG1831 Predicted metal-depend 93.4 1.8 3.8E-05 39.8 12.1 135 100-287 145-283 (285)
125 COG1820 NagA N-acetylglucosami 93.2 0.088 1.9E-06 50.8 3.7 38 266-303 324-369 (380)
126 COG0804 UreC Urea amidohydrola 91.8 2.2 4.7E-05 41.6 10.9 137 8-172 145-291 (568)
127 COG0084 TatD Mg-dependent DNas 91.1 4.4 9.5E-05 37.3 12.1 80 199-286 173-256 (256)
128 COG0402 SsnA Cytosine deaminas 90.8 6.2 0.00013 38.8 13.7 158 100-297 198-373 (421)
129 PRK10425 DNase TatD; Provision 90.3 7.8 0.00017 35.6 13.1 67 215-286 189-258 (258)
130 PF02126 PTE: Phosphotriestera 88.9 0.5 1.1E-05 44.7 4.1 154 100-284 142-307 (308)
131 smart00518 AP2Ec AP endonuclea 88.6 13 0.00028 33.9 13.3 90 65-159 13-106 (273)
132 PRK09358 adenosine deaminase; 87.5 8 0.00017 36.7 11.5 69 100-182 182-251 (340)
133 COG3653 N-acyl-D-aspartate/D-g 85.4 1.4 3.1E-05 43.1 5.1 33 266-298 473-512 (579)
134 PRK01060 endonuclease IV; Prov 81.1 44 0.00094 30.5 13.3 89 66-159 16-111 (281)
135 TIGR01430 aden_deam adenosine 78.6 59 0.0013 30.5 13.8 67 100-182 172-241 (324)
136 KOG3892 N-acetyl-glucosamine-6 75.8 2 4.3E-05 39.7 2.3 38 267-304 349-394 (407)
137 PTZ00372 endonuclease 4-like p 75.0 91 0.002 30.8 15.1 103 49-160 131-241 (413)
138 COG1735 Php Predicted metal-de 72.0 39 0.00085 31.9 9.8 153 100-286 152-314 (316)
139 cd01301 rDP_like renal dipepti 70.3 18 0.00039 34.2 7.5 134 146-282 163-308 (309)
140 COG1229 FwdA Formylmethanofura 68.2 4.8 0.0001 39.4 3.0 54 266-320 437-506 (575)
141 COG1099 Predicted metal-depend 61.9 1.1E+02 0.0024 27.7 10.1 135 11-165 21-171 (254)
142 PF03102 NeuB: NeuB family; I 58.1 1.3E+02 0.0029 27.3 10.4 72 65-160 79-150 (241)
143 TIGR00587 nfo apurinic endonuc 57.8 1.5E+02 0.0033 27.1 11.6 102 51-160 3-111 (274)
144 PF00701 DHDPS: Dihydrodipicol 57.1 61 0.0013 29.9 8.4 88 100-189 22-113 (289)
145 COG2089 SpsE Sialic acid synth 56.2 1.9E+02 0.0041 27.7 12.0 17 65-82 113-129 (347)
146 TIGR02313 HpaI-NOT-DapA 2,4-di 54.2 89 0.0019 29.1 9.0 87 100-189 21-112 (294)
147 COG1052 LdhA Lactate dehydroge 51.3 52 0.0011 31.3 6.9 83 145-233 164-263 (324)
148 TIGR00683 nanA N-acetylneurami 50.7 1.3E+02 0.0027 28.1 9.3 119 100-220 21-153 (290)
149 cd00952 CHBPH_aldolase Trans-o 49.8 94 0.002 29.2 8.4 12 160-171 89-100 (309)
150 cd00951 KDGDH 5-dehydro-4-deox 48.9 1.4E+02 0.003 27.7 9.4 8 114-121 70-77 (289)
151 PRK03170 dihydrodipicolinate s 47.7 1.4E+02 0.0029 27.7 9.1 15 100-114 22-36 (292)
152 PLN02417 dihydrodipicolinate s 46.5 1.4E+02 0.003 27.6 8.9 28 160-187 82-111 (280)
153 cd00408 DHDPS-like Dihydrodipi 43.7 1.5E+02 0.0032 27.2 8.6 15 100-114 18-32 (281)
154 TIGR03569 NeuB_NnaB N-acetylne 43.7 3E+02 0.0065 26.3 11.7 71 65-160 99-172 (329)
155 TIGR00674 dapA dihydrodipicoli 43.5 1.4E+02 0.0031 27.5 8.5 29 160-188 79-109 (285)
156 cd00954 NAL N-Acetylneuraminic 42.0 1.9E+02 0.0041 26.7 9.1 30 159-188 81-112 (288)
157 cd00443 ADA_AMPD Adenosine/AMP 40.9 1.4E+02 0.003 27.9 8.1 68 100-182 153-222 (305)
158 PRK09356 imidazolonepropionase 40.8 3.4E+02 0.0073 26.1 12.6 69 100-184 222-290 (406)
159 PRK04147 N-acetylneuraminate l 39.9 2E+02 0.0043 26.7 8.9 29 160-188 85-115 (293)
160 PRK09875 putative hydrolase; P 39.0 1E+02 0.0022 28.9 6.7 39 130-171 134-173 (292)
161 PF07071 DUF1341: Protein of u 38.7 1.2E+02 0.0025 27.0 6.5 73 67-160 140-212 (218)
162 cd00950 DHDPS Dihydrodipicolin 38.0 1.5E+02 0.0033 27.2 7.8 9 114-122 70-78 (284)
163 cd00953 KDG_aldolase KDG (2-ke 33.6 2.6E+02 0.0057 25.7 8.6 83 100-185 20-104 (279)
164 KOG3968 Atrazine chlorohydrola 33.3 92 0.002 30.8 5.5 71 215-297 314-396 (439)
165 PRK03620 5-dehydro-4-deoxygluc 33.3 3.2E+02 0.007 25.5 9.2 9 113-121 76-84 (303)
166 TIGR03581 EF_0839 conserved hy 32.6 2E+02 0.0043 25.9 7.0 73 67-160 140-212 (236)
167 cd00019 AP2Ec AP endonuclease 32.4 3.8E+02 0.0083 24.2 12.7 58 100-160 85-146 (279)
168 TIGR03249 KdgD 5-dehydro-4-deo 32.3 3.5E+02 0.0075 25.1 9.2 47 69-121 33-82 (296)
169 PTZ00124 adenosine deaminase; 30.3 1.2E+02 0.0026 29.4 5.8 106 100-234 206-312 (362)
170 PF00962 A_deaminase: Adenosin 29.9 1.8E+02 0.0038 27.3 6.9 67 100-182 180-249 (331)
171 PRK06361 hypothetical protein; 28.8 1.6E+02 0.0034 25.7 6.0 21 266-286 190-210 (212)
172 PF10566 Glyco_hydro_97: Glyco 27.7 89 0.0019 29.1 4.3 49 67-123 111-160 (273)
173 COG1197 Mfd Transcription-repa 27.7 54 0.0012 36.4 3.2 39 196-235 670-708 (1139)
174 smart00195 DSPc Dual specifici 27.2 2.3E+02 0.005 22.5 6.3 53 102-171 67-119 (138)
175 PF02826 2-Hacid_dh_C: D-isome 27.1 3.9E+02 0.0084 22.6 8.9 46 186-233 109-154 (178)
176 PRK09856 fructoselysine 3-epim 27.0 4.6E+02 0.01 23.5 9.8 79 100-180 90-183 (275)
177 COG2089 SpsE Sialic acid synth 26.2 2.9E+02 0.0063 26.5 7.3 31 182-220 234-264 (347)
178 PRK07377 hypothetical protein; 25.2 58 0.0013 28.3 2.3 21 209-230 115-135 (184)
179 PF10907 DUF2749: Protein of u 24.9 1.3E+02 0.0029 21.5 3.7 18 8-25 13-30 (66)
180 KOG3020 TatD-related DNase [Re 23.7 6.2E+02 0.013 23.8 9.5 22 265-286 275-296 (296)
181 COG4464 CapC Capsular polysacc 23.1 1.7E+02 0.0037 26.4 4.9 104 7-123 26-140 (254)
182 TIGR00695 uxuA mannonate dehyd 21.9 2E+02 0.0044 28.2 5.7 26 100-125 214-239 (394)
183 TIGR03234 OH-pyruv-isom hydrox 21.8 5.7E+02 0.012 22.7 10.1 85 100-186 84-183 (254)
184 PRK00912 ribonuclease P protei 21.4 3.7E+02 0.0081 23.9 7.1 60 213-288 157-218 (237)
185 PRK07114 keto-hydroxyglutarate 20.8 3.2E+02 0.0068 24.6 6.3 85 7-118 33-117 (222)
186 PRK15409 bifunctional glyoxyla 20.7 3.7E+02 0.008 25.5 7.1 48 182-232 215-262 (323)
No 1
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.7e-74 Score=561.64 Aligned_cols=308 Identities=24% Similarity=0.254 Sum_probs=269.1
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKL 82 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~ 82 (329)
+-||..||++||+|||+|||||+|++++++.++.+..++++++. |||++|++++.+ .....++-++.. ++++|.
T Consensus 73 ~~tgs~AAa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~--vd~~~~~~it~~-~~~~~~~~~~~~---~~g~~~ 146 (430)
T COG0044 73 FETGSRAAAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSV--VDYAFYGGLTKG-NLGKLELTERGV---EAGFKG 146 (430)
T ss_pred HHHHHHHHHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccce--eEEEEEEEEecc-ccchhhhhhhhh---ccceEE
Confidence 45899999999999999999999999999999999999887666 999999998532 111122333321 358899
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC-----------------ChhHHHHHHHHHHHHHHH
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------------DIFDREKVFIDTILQPLI 145 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~-----------------~~~~~E~~av~~~~~~~l 145 (329)
||.++. +..+. ..++++|++++++|.++++||||++++. .+..+|..+++|.+ .+
T Consensus 147 F~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~H~Ed~~~~~~~~~~~g~~~~~~~~~~~p~~aE~~~iar~~--~l 218 (430)
T COG0044 147 FMDDST-----GALDD-DVLEEALEYAAELGALILVHAEDDDLIAEGVMNEGLRAPELGLAGRPPIAEASAIARDL--EL 218 (430)
T ss_pred EecCCc-----CcCCH-HHHHHHHHHHHhcCCeEEEecCChhHhhhHHHhcCccchhhccCCCChHHHHHHHHHHH--HH
Confidence 996531 33455 8999999999999999999999996431 12478999999999 99
Q ss_pred HhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCC
Q 020186 146 QRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 223 (329)
Q Consensus 146 a~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~ 223 (329)
|+.+|+|+||+|+||++++++|++||. .+||||||||||+||++++. .+++++|||||||+++||++||++|++|.
T Consensus 219 a~~~g~~vhi~HiSt~~sv~li~~ak~~g~~vt~EvtphHL~l~~~~~~--~~~~~~k~nPPLR~~~dr~aL~~~l~~G~ 296 (430)
T COG0044 219 ARATGARVHICHISTKESVELIRAAKAEGIRVTAEVTPHHLLLDEEDIE--DLGTLAKVNPPLRDEEDREALWEALKDGV 296 (430)
T ss_pred HHHhCCcEEEEEcCCHHHHHHHHHHhhcCCceEEeecchheEccHhHhh--ccCcceEECCCCCCHHHHHHHHHHHhCCC
Confidence 999999999999999999999999997 79999999999999999987 47899999999999999999999999999
Q ss_pred CCeEEecCCCCCCcCcccccC--CcCCccchhHHHHHHHHHHH-hcCCHHHHHHHHhhhhhhhcCCCCC-------cccE
Q 020186 224 RKFFLGTDSAPHERGRKECAC--GCAGIYNAPVALSLYAKVFE-EMGALDKLEAFTSFNGPDFYGLPRN-------TSKI 293 (329)
Q Consensus 224 Id~~i~SDHaPh~~~eK~~~~--~~~Gi~~~e~~lpll~~~~~-~~~~l~~~v~~~s~nPAkifgl~~~-------dADl 293 (329)
|| +|+||||||+.+||..+| .++|++|+|+.+|++|+.++ +++||++++++||+||||+|||+.| +|||
T Consensus 297 ID-~iasDHaPht~eeK~~~f~~ap~G~~glE~~lpl~l~lv~~g~lsl~~~v~~~S~nPA~ifgl~~~g~i~~G~~ADl 375 (430)
T COG0044 297 ID-VIASDHAPHTLEEKRLPFEEAPSGIPGLETALPLLLTLVKKGRLSLERLVELLSTNPARIFGLPPKGAIEEGADADL 375 (430)
T ss_pred Cc-EEEcCCCCCCHHHhccchhhCCCCCccHHHHHHHHHHHHHcCCcCHHHHHHHHhhCHHHHhCCCCCCcccCCCccCE
Confidence 99 999999999999998655 56799999999999998554 4789999999999999999999532 8999
Q ss_pred EEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 294 KLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 294 vi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+|| +++|+|+.++++||++|||| +|++++|+|++
T Consensus 376 ~lvD~~~~~~i~~~~~~sk~~~sPf-~G~~~~g~v~~ 411 (430)
T COG0044 376 VLVDPDEEWTIRAEELYSKAKNSPF-EGFELKGRVVA 411 (430)
T ss_pred EEEcCCCCeEEchhhhccccCCCCc-CCCEEeeeEEE
Confidence 999 68999999999999999999 99999999986
No 2
>PRK07369 dihydroorotase; Provisional
Probab=100.00 E-value=9.9e-74 Score=558.60 Aligned_cols=307 Identities=19% Similarity=0.190 Sum_probs=272.4
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeC-CCCCHHHHHHHHhcCceeEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLT-DTTSPDEIKLARKTGVVFAVK 81 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~-~~~~~~el~~l~~~G~v~~~K 81 (329)
|.|+..+|++||||||++|||+.|++++.+.++.+++++++.+. |||.+|++++.+ .+.+++++.+|.+.|+ .+||
T Consensus 77 ~~s~~~aa~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~--vd~~~~~~~~~~~~~~~~~ei~~l~~~Gv-~~f~ 153 (418)
T PRK07369 77 LASLAAAAAAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPP--VQLHFWGALTLGGQGKQLTELAELAAAGV-VGFT 153 (418)
T ss_pred HHHHHHHHHhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCc--eeEEEEEEEeeCCCCccHhhHHHHHHCCC-EEEE
Confidence 45788999999999999999999999999999999888877655 999999998644 2346889999988885 5887
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC-----------------ChhHHHHHHHHHHHHHH
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------------DIFDREKVFIDTILQPL 144 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~-----------------~~~~~E~~av~~~~~~~ 144 (329)
.+ .++.|. ..++++|++++++|.++++||||+++.. .+..+|..++.|++ .
T Consensus 154 ~~---------~~~~~~-~~l~~~~~~~~~~~~~v~~H~Ed~~l~~~~~~~~g~~~~~~~~~~~p~~aE~~av~r~~--~ 221 (418)
T PRK07369 154 DG---------QPLENL-ALLRRLLEYLKPLGKPVALWPCDRSLAGNGVMREGLLALRLGLPGDPASAETTALAALL--E 221 (418)
T ss_pred CC---------CcCCCH-HHHHHHHHHHHhcCCeEEEecCChhhhhcCcccCChhHHHhCCCCCCHHHHHHHHHHHH--H
Confidence 21 234455 7899999999999999999999988631 13578999999999 8
Q ss_pred HHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcC
Q 020186 145 IQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG 222 (329)
Q Consensus 145 la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G 222 (329)
+|+.+|+|+||+|+||++++++|+++|+ .+||||||||||+||++++. .+++++|||||||+++||++||++|++|
T Consensus 222 la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~phhL~l~~~~~~--~~~~~~kv~PPLR~~~d~~aL~~~l~~G 299 (418)
T PRK07369 222 LVAAIGTPVHLMRISTARSVELIAQAKARGLPITASTTWMHLLLDTEALA--SYDPNLRLDPPLGNPSDRQALIEGVRTG 299 (418)
T ss_pred HHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEecHHHHhccHHHHh--ccCCCcEECCCCCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999986 79999999999999999986 3578999999999999999999999999
Q ss_pred CCCeEEecCCCCCCcCcccccCC--cCCccchhHHHHHHHHHHH--hcCCHHHHHHHHhhhhhhhcCCCCC------ccc
Q 020186 223 SRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYGLPRN------TSK 292 (329)
Q Consensus 223 ~Id~~i~SDHaPh~~~eK~~~~~--~~Gi~~~e~~lpll~~~~~--~~~~l~~~v~~~s~nPAkifgl~~~------dAD 292 (329)
+|| +|+||||||+.++|..+|. ++|++|+|+.||++++.++ +.++++++++++|.||||+||++.| +||
T Consensus 300 ~Id-~i~SDHaP~~~~~K~~~~~~~~~G~~G~e~~l~~~~~~~v~~~~i~l~~~v~~~s~nPA~~lgl~~G~i~~G~~AD 378 (418)
T PRK07369 300 VID-AIAIDHAPYTYEEKTVAFAEAPPGAIGLELALPLLWQNLVETGELSALQLWQALSTNPARCLGQEPPSLAPGQPAE 378 (418)
T ss_pred CCC-EEEcCCCCCCHHHccCCHhHCCCCceeHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCCcCcccCCCcCC
Confidence 999 9999999999999976663 5699999999999996543 3689999999999999999999644 799
Q ss_pred EEEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 293 IKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 293 lvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
|+|| +++|+|+.++++|+++|||| +|++++|||++
T Consensus 379 lvi~d~~~~~~v~~~~~~s~~~~sp~-~G~~l~G~v~~ 415 (418)
T PRK07369 379 LILFDPQKTWTVSAQTLHSLSRNTPW-LGQTLKGRVLQ 415 (418)
T ss_pred EEEEcCCCCEEECcccccCCCCCCCC-CCCEeeeEEEE
Confidence 9999 68999999999999999999 99999999986
No 3
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=100.00 E-value=1.1e-70 Score=523.78 Aligned_cols=311 Identities=59% Similarity=0.936 Sum_probs=264.8
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhC-CCCccEEEEEEEEeCCCCCHHHHHHHHhc-CceeEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL-PASSNFTPLMTLYLTDTTSPDEIKLARKT-GVVFAV 80 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~-~~~vd~~~~~~~~~~~~~~~~el~~l~~~-G~v~~~ 80 (329)
|.|++.+|++|| ||+++|||+.|+.++.+.+..+..++++.+ + +||.+++++..+.+...++++++.+. | ++||
T Consensus 19 ~~~~~~aa~~gG-Ttvv~mpnt~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~el~~~~~~~G-~~g~ 94 (335)
T cd01294 19 LKLVLPYTARGF-SRAIVMPNLKPPVTTTADALAYRERILAADPG--PNFTPLMTLYLTENTTPEELREAKKKGG-IRGV 94 (335)
T ss_pred HHHHHHHHHhCC-CEEEECCCCCCCCCCHHHHHHHHHHHHhcCCC--CcEEEEEEEeccCCCCHHHHHHHHHhCC-ceEE
Confidence 457889999999 999999999999998887877777777654 4 78988877643434357899999876 8 5699
Q ss_pred EEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhc-CCCeEEEEecC
Q 020186 81 KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRL-PQLKVVMEHIT 159 (329)
Q Consensus 81 K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~-~~~~lhi~HvS 159 (329)
|+||.+...+.+.++.|+ ..++++|++++++|++|++||||..+.......|.+.+.+++ .+|+. +++|+||+|+|
T Consensus 95 Klf~~~~~~~~~~~~~d~-~~l~~~~e~~~~~g~~V~vHaE~~~l~~~~~~~e~~~~~~~~--~lA~~~p~~~v~i~Hvs 171 (335)
T cd01294 95 KLYPAGATTNSQGGVTDL-EKIYPVLEAMQKLGMPLLVHGEVPDFKIDVLDREAKFIPVLE--PLAQRFPKLKIVLEHIT 171 (335)
T ss_pred EEecCCCccCCCCCcCCH-HHHHHHHHHHHHcCCeEEEecCCCcccccchhhHHHHHHHHH--HHHHHcCCCeEEEeccc
Confidence 999864222233445555 899999999999999999999998763333455666777777 78885 79999999999
Q ss_pred CHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeE-EecCCCCCCcC
Q 020186 160 TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFF-LGTDSAPHERG 238 (329)
Q Consensus 160 t~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~-i~SDHaPh~~~ 238 (329)
|++++++|+++|+ +||||||||||+||++++....+|+++|||||||+++||++||++|++|.|| + |+||||||+.+
T Consensus 172 t~~~~~~i~~ak~-~vt~Et~ph~L~l~~~~~~~~~~g~~~k~~PPlR~~~d~~~L~~~l~~G~id-~~i~SDHaP~~~~ 249 (335)
T cd01294 172 TADAVEYVKSCNE-NVAATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKAATSGHPK-FFLGSDSAPHPKS 249 (335)
T ss_pred HHHHHHHHHhCCC-CcEEEEchhHheeeHHHhcCCCCCCCeEEcCCCCCHHHHHHHHHHHHcCCCC-eEEECCCCCCCCc
Confidence 9999999999986 8999999999999999985322588999999999999999999999999999 8 99999999999
Q ss_pred cccccCCcCCccchhHHHHHHHHHHHhcCCHHHHHHHHhhhhhhhcCCCCCcccEEEEecceeecCCccCcCCcccccCC
Q 020186 239 RKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFA 318 (329)
Q Consensus 239 eK~~~~~~~Gi~~~e~~lpll~~~~~~~~~l~~~v~~~s~nPAkifgl~~~dADlvi~~~~~~v~~~~~~s~~~~spf~~ 318 (329)
+|..++|.+|++++|+++|++++++++++++++++++||+||||+|||+.+.++|++++++|+|++++++|+++|||| +
T Consensus 250 ~K~~~~g~~Gi~~~~~~l~~~~~~~~~~l~l~~~v~~~s~nPA~i~gl~~~kg~i~~~~~~~~v~~~~~~s~~~~sp~-~ 328 (335)
T cd01294 250 NKESSCGCAGIFSAPIALPYLAEVFEEHNALDKLEAFASDNGPNFYGLPPNKKTITLVKEPWKVPEKIPFGNNGVVPF-R 328 (335)
T ss_pred cccCCCCCccccCHHHHHHHHHHHHhccCCHHHHHHHHHhHHHHHhCCCCCCCeEEEEeeceEcCchhccCCCceecc-c
Confidence 998888989999999999999876667899999999999999999999444599999999999999999999999999 6
Q ss_pred C-cEEE
Q 020186 319 G-NTLE 323 (329)
Q Consensus 319 G-~~l~ 323 (329)
| .+|+
T Consensus 329 g~~~~~ 334 (335)
T cd01294 329 AGETLR 334 (335)
T ss_pred CCccCC
Confidence 5 4443
No 4
>PRK09059 dihydroorotase; Validated
Probab=100.00 E-value=2.4e-70 Score=536.61 Aligned_cols=308 Identities=19% Similarity=0.179 Sum_probs=270.3
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeC-CCCCHHHHHHHHhcCceeEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLT-DTTSPDEIKLARKTGVVFAVK 81 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~-~~~~~~el~~l~~~G~v~~~K 81 (329)
+.++..+|++|||||+++|||+.|++++.+.++.+.+.+++.+. +||.++++++.+ .+++++++.+|.+.|+ .+||
T Consensus 80 ~~~~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~--vd~~~~~~~~~~~~~~~l~e~~~l~~~Gv-~~f~ 156 (429)
T PRK09059 80 IASASRAAAAGGVTSIIMMPDTDPVIDDVALVEFVKRTARDTAI--VNIHPAAAITKGLAGEEMTEFGLLRAAGA-VAFT 156 (429)
T ss_pred HHHHHHHHHhCCcEEEEeccCCCCCCCCHHHHHHHHHHhcccCc--ccEEEEeEEecCCCCcchHHHHHHHhcCc-EEEe
Confidence 34677899999999999999999999999999888888776555 999999987533 3456788999988884 4665
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC-----------------ChhHHHHHHHHHHHHHH
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------------DIFDREKVFIDTILQPL 144 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~-----------------~~~~~E~~av~~~~~~~ 144 (329)
. ++.++.|. ..++++|++++++|.++++||||.++.. .+..+|..++.|++ .
T Consensus 157 ~--------~~~~~~~~-~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~~~~~~~~~~~rP~~aE~~av~r~~--~ 225 (429)
T PRK09059 157 D--------GRRSVANT-QVMRRALTYARDFDAVIVHETRDPDLGGNGVMNEGLFASWLGLSGIPREAEVIPLERDL--R 225 (429)
T ss_pred c--------CCcccCCH-HHHHHHHHHHHhcCCEEEEecCChhhhcCCCcCCcHHHHHcCCCCCCHHHHHHHHHHHH--H
Confidence 2 12345565 7799999999999999999999987631 12478999999999 9
Q ss_pred HHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcC
Q 020186 145 IQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG 222 (329)
Q Consensus 145 la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G 222 (329)
+|+++|+|+||+|+||++++++|+++|+ .+||||||||||+|+++++. .+++++|||||||+++||++||++|++|
T Consensus 226 la~~~~~~~hi~hvs~~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~--~~~~~~kvnPPLR~~~d~~~L~~~l~~g 303 (429)
T PRK09059 226 LAALTRGRYHAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLNENDIG--EYRTFFKLSPPLRTEDDRVAMVEAVASG 303 (429)
T ss_pred HHHHHCCcEEEEecCCHHHHHHHHHHHHCCCCEEEeecHHHHhccHHHHh--ccCCccEEcCCCCCHHHHHHHHHHHHcC
Confidence 9999999999999999999999999986 79999999999999999986 3688999999999999999999999999
Q ss_pred CCCeEEecCCCCCCcCcccccCC--cCCccchhHHHHHHHHHHH-hcCCHHHHHHHHhhhhhhhcCCCCC------cccE
Q 020186 223 SRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFE-EMGALDKLEAFTSFNGPDFYGLPRN------TSKI 293 (329)
Q Consensus 223 ~Id~~i~SDHaPh~~~eK~~~~~--~~Gi~~~e~~lpll~~~~~-~~~~l~~~v~~~s~nPAkifgl~~~------dADl 293 (329)
.|| +|+|||+||+.++|..+|+ ++|++|+|+++|++++.+. +.++++++++++|+||||+|||++| +|||
T Consensus 304 ~id-~i~sDh~p~~~~~K~~~~~~~~~G~~gle~~l~~~~~~v~~~~l~l~~~~~~~s~nPA~~~gl~~G~l~~G~~ADl 382 (429)
T PRK09059 304 TID-IIVSSHDPQDVDTKRLPFSEAAAGAIGLETLLAAALRLYHNGEVPLLRLIEALSTRPAEIFGLPAGTLKPGAPADI 382 (429)
T ss_pred CCc-EEEeCCCCCCHHHCcCChhhCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCcCcccCCCcCCE
Confidence 999 9999999999999987764 4699999999999997654 4689999999999999999999754 7999
Q ss_pred EEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 294 KLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 294 vi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+|| +++|+|+.++++|+++|||| +|++++|||++
T Consensus 383 vl~d~~~~~~v~~~~~~s~~~~sPf-~G~~l~G~v~~ 418 (429)
T PRK09059 383 IVIDLDEPWVVDPEDLKSRSKNTPF-EEARFQGRVVR 418 (429)
T ss_pred EEECCCCCEEECcccCccCCCCCCC-CCCEEeeEEEE
Confidence 999 69999999999999999999 99999999975
No 5
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=100.00 E-value=1.8e-69 Score=515.15 Aligned_cols=309 Identities=58% Similarity=0.950 Sum_probs=262.3
Q ss_pred CccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhc-CceeEEEEeeccccccCC
Q 020186 14 HYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKT-GVVFAVKLYPAGATTNSQ 92 (329)
Q Consensus 14 GvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~-G~v~~~K~f~~~~~~~~~ 92 (329)
|||++++|||+.|++++.+.++.+.+++++.++..+||.+|++++.+.+...+||+.+.+. | +.|||+||++...+++
T Consensus 30 ~vt~vv~mPnt~P~~~~~e~~~~~~~~~~~~s~~~vDf~~~~~v~~~~~~~~~Ei~~l~~~~G-v~g~Klf~~~~~~~~~ 108 (341)
T TIGR00856 30 IFSRAIVMPNLAPPVTTVEAAVAYRERILDAVPAGHDFTPLMTLYLTDSLTPEELERAKNEGV-VRAVKLYPAGATTNSS 108 (341)
T ss_pred hcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcceEEEEEEECCCCCCHHHHHHHHHcCC-eEEEEEccCCcccCCC
Confidence 4999999999999999999999888888776530169999999853434467899999877 8 5799999864222334
Q ss_pred CCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHH-hcCCCeEEEEecCCHHHHHHHHccc
Q 020186 93 DGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQ-RLPQLKVVMEHITTMDAVKFVESCK 171 (329)
Q Consensus 93 ~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la-~~~~~~lhi~HvSt~~sl~~i~~ak 171 (329)
.++.|+ ..++++|++++++|.++++||||.+-.......|..++.+.+. .+| +.+++|+||+|+||++++++|+++|
T Consensus 109 ~~v~dd-~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~~~~e~~a~~~~i~-~lA~~~~~~~~~i~H~st~~~~~~i~~a~ 186 (341)
T TIGR00856 109 HGVTDI-DAIMPVLEAMEKIGLPLLLHGEVTHGDIDIFDREARFIESVLE-PLRQRFPALKVVLEHITTKDAIDYVEDGN 186 (341)
T ss_pred cCCCCH-HHHHHHHHHHHHcCCeEEEeecCCCCCcccccchhhhhHHHHH-HHHHHccCCeEEEEecCcHHHHHHHHHcC
Confidence 556676 8999999999999999999999973111223346666765552 455 5789999999999999999999997
Q ss_pred CCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeE-EecCCCCCCcCcccccCCcCCcc
Q 020186 172 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFF-LGTDSAPHERGRKECACGCAGIY 250 (329)
Q Consensus 172 ~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~-i~SDHaPh~~~eK~~~~~~~Gi~ 250 (329)
.+||||||||||+||++++...++|+++|||||||+++||++||++|++|.|| + |+||||||+.++|..+..++|++
T Consensus 187 -~~vt~E~~ph~L~l~~~~~~~~~~~~~~k~~PPlR~~~d~~aL~~~l~~G~id-~~i~SDHaP~~~~~K~~~~~~~G~~ 264 (341)
T TIGR00856 187 -NRLAATITPQHLMFTRNDLLGGGVNPHLYCLPILKRNIHQQALLELAASGFPK-FFLGTDSAPHARHRKESSCGCAGCF 264 (341)
T ss_pred -CCEEEEEcHHHHhccHHHHhccCCCCceEEeCCCCCHHHHHHHHHHHHcCCCC-EEEeCCCCCCChhHcCCCCCCCCcc
Confidence 46999999999999999985312578999999999999999999999999999 8 99999999999997544457999
Q ss_pred chhHHHHHHHHHHHhcCCHHHHHHHHhhhhhhhcCCCCCcccEEEEecceeecCCccCcCCcccccCCCcEEEEEEe
Q 020186 251 NAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPS 327 (329)
Q Consensus 251 ~~e~~lpll~~~~~~~~~l~~~v~~~s~nPAkifgl~~~dADlvi~~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~ 327 (329)
|+|+++|++++++.+.++++++++++|+||||+||||+|||||+||+++|+|++++++|+++||||+.|++|+|+|.
T Consensus 265 g~e~~l~~~~~~~~~~~~l~~~v~~~s~nPAk~~gl~~~dAdi~~~~~~~~i~~~~~~s~~~~sp~~~~~~~~~~v~ 341 (341)
T TIGR00856 265 SAPTALPSYAEVFEEMNALENLEAFCSDNGPQFYGLPVNSTKIELVKKEQQIPESIALTDDTLVPFRAGETLSWSVK 341 (341)
T ss_pred cHHHHHHHHHHHHhcCCCHHHHHHHHhHhHHHHhCCCCCCceEEEEeccEEeCchhccCCCCcccccCCcccceeeC
Confidence 99999999988776778999999999999999999987899999999999999999999999999999999999984
No 6
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=100.00 E-value=8.6e-69 Score=511.02 Aligned_cols=295 Identities=21% Similarity=0.244 Sum_probs=259.8
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKL 82 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~ 82 (329)
|-||..||++||||||++|||+.|++++.+.++.+.+++++.+. |||++|+++ ..+.+.+||.++.+.|+ .+||+
T Consensus 26 ~~t~t~aA~~GG~Ttv~~mpn~~p~~~~~~~~~~~~~~a~~~~~--~d~~~~~~~--~~~~~~~el~~l~~~Gv-~g~K~ 100 (337)
T cd01302 26 FESGSRAAAAGGVTTVIDMPNTGPPPIDLPAIELKIKLAEESSY--VDFSFHAGI--GPGDVTDELKKLFDAGI-NSLKV 100 (337)
T ss_pred HHHHHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHhCcCcE--eeEEEEEec--cCccCHHHHHHHHHcCC-cEEEE
Confidence 46889999999999999999999999999999998888876655 999999886 33446889999998995 69999
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHH
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMD 162 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~ 162 (329)
|+++. ++.....++ ..++++|+++++.|.++++||| +++ .+|+++|+|+||+|+|+++
T Consensus 101 f~~~~--~~~~~~~~~-~~l~~~~~~~~~~g~~v~~H~E-----------------r~~--~la~~~g~~l~i~Hiss~~ 158 (337)
T cd01302 101 FMNYY--FGELFDVDD-GTLMRTFLEIASRGGPVMVHAE-----------------RAA--QLAEEAGANVHIAHVSSGE 158 (337)
T ss_pred EEecc--CCCccccCH-HHHHHHHHHHHhcCCeEEEeHH-----------------HHH--HHHHHhCCcEEEEeCCCHH
Confidence 99642 222212344 8899999999999999999999 455 7889999999999999999
Q ss_pred HHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcc
Q 020186 163 AVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRK 240 (329)
Q Consensus 163 sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK 240 (329)
++++|+++|+ .+||||||||||+|+++++. .+++++|||||||+++||++||++|++|.|| +|+|||+||+.++|
T Consensus 159 ~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~--~~~~~~k~~Pplr~~~~~~~L~~~l~~G~id-~i~sDh~p~~~~~k 235 (337)
T cd01302 159 ALELIKFAKNKGVKVTCEVCPHHLFLDESMLR--LNGAWGKVNPPLRSKEDREALWEGVKNGKID-TIASDHAPHSKEEK 235 (337)
T ss_pred HHHHHHHHHHCCCcEEEEcChhhheeCHHHhh--CCCceEEEeCCCCCHHHHHHHHHHHhCCCCC-EEecCCCCCCHHHh
Confidence 9999999986 79999999999999999986 3588999999999999999999999999999 99999999999998
Q ss_pred cc--cC--CcCCccchhHHHHHHHHHH-HhcCCHHHHHHHHhhhhhhhcCC-CCC------cccEEEE--ecceeecCCc
Q 020186 241 EC--AC--GCAGIYNAPVALSLYAKVF-EEMGALDKLEAFTSFNGPDFYGL-PRN------TSKIKLT--KIPWKVPEAF 306 (329)
Q Consensus 241 ~~--~~--~~~Gi~~~e~~lpll~~~~-~~~~~l~~~v~~~s~nPAkifgl-~~~------dADlvi~--~~~~~v~~~~ 306 (329)
.. +| .++|++|+|+.+|++++.+ +++++++++++++|.||||+||+ ++| +|||+|| +.+|+|+.++
T Consensus 236 ~~~~~~~~a~~G~~g~e~~l~~~~~~~~~~~i~~~~~~~~~s~~pA~~~gl~~~g~i~~G~~ADlvi~d~~~~~~v~~~~ 315 (337)
T cd01302 236 ESGKDIWKAPPGFPGLETRLPILLTEGVKRGLSLETLVEILSENPARIFGLYPKGTIAVGYDADLVIVDPKKEWKVTAEE 315 (337)
T ss_pred ccCCCcccCCCCcccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCCccccCCcCCEEEEeCCCcEEEcHHH
Confidence 64 44 3469999999999999755 44789999999999999999999 444 7999999 6899999999
Q ss_pred cCcCCcccccCCCcEEEEEEee
Q 020186 307 SFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 307 ~~s~~~~spf~~G~~l~G~v~~ 328 (329)
++|+++|||| +|++|+|||++
T Consensus 316 ~~s~~~~sp~-~G~~l~G~v~~ 336 (337)
T cd01302 316 IESKADWTPF-EGMEVTGKPVS 336 (337)
T ss_pred hcccCCCCCc-CCcEEEEEEEE
Confidence 9999999999 99999999986
No 7
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=100.00 E-value=1.4e-68 Score=509.34 Aligned_cols=293 Identities=16% Similarity=0.199 Sum_probs=247.9
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKL 82 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~ 82 (329)
|.||..||++||||||+|||||.|++++.+.++.+.+++++.+. +||++|+++ . +.+.+++.+|.. + +.|||+
T Consensus 26 ~~sgs~AAa~GGvTtv~dmPnt~P~~~~~~~~~~~~~~a~~~s~--vd~~~~~~~--~-~~~~~~~~~l~~-~-~~g~k~ 98 (344)
T cd01316 26 FASGTKAALAGGFTMVRAMPNTNPSIVDVASLKLVQSLAQAKAR--CDYAFSIGA--T-STNAATVGELAS-E-AVGLKF 98 (344)
T ss_pred HHHHHHHHHhCCCeEEEECCCCCCCCCCHHHHHHHHHHhccCcE--EeEEEEeee--c-CCCHHHHHHHHh-c-cCeEEE
Confidence 45889999999999999999999999999999999988877665 999999876 3 334566777765 3 469999
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHH
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMD 162 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~ 162 (329)
|+++.+ .....++ ...++.+.+..+.+.++.+|+|+. .+.+++ .+|+++|+|+||+|+||++
T Consensus 99 f~~~~~--~~~~~~~--~~~~~~~~~~~~~~~p~~~~~e~~------------~~~~~l--~la~~~g~~lhi~HiSt~~ 160 (344)
T cd01316 99 YLNETF--STLILDK--ITAWASHFNAWPSTKPIVTHAKSQ------------TLAAVL--LLASLHNRSIHICHVSSKE 160 (344)
T ss_pred EECCCC--CCCccch--HHHHHHHHHhcccCCCeEEehhhH------------HHHHHH--HHHHHHCCCEEEEeCCCHH
Confidence 986432 1222334 233344445545588999999865 467777 8999999999999999999
Q ss_pred HHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcc
Q 020186 163 AVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRK 240 (329)
Q Consensus 163 sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK 240 (329)
++++|++||+ .+||||||||||+||++++.. +++|||||||+++||++||++| +.|| +|+||||||+.++|
T Consensus 161 ~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~----~~~k~~PPLR~~~dr~aL~~~l--~~id-~i~SDHaP~~~~~K 233 (344)
T cd01316 161 EINLIRLAKARGLKVTCEVSPHHLFLSQDDLPR----GQYEVRPFLPTREDQEALWENL--DYID-CFATDHAPHTLAEK 233 (344)
T ss_pred HHHHHHHHHHCCCcEEEEechHHeeccHHHhhc----CCceeCCCCcCHHHHHHHHHHH--hcCC-EEEcCCCCCCHHHh
Confidence 9999999986 799999999999999999852 5899999999999999999999 4699 99999999999998
Q ss_pred cccCCcCCccchhHHHHHHHHHHHh-cCCHHHHHHHHhhhhhhhcCCCCCcccEEEE--ecceeecCCccCcCCcccccC
Q 020186 241 ECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPRNTSKIKLT--KIPWKVPEAFSFSFGDIIPMF 317 (329)
Q Consensus 241 ~~~~~~~Gi~~~e~~lpll~~~~~~-~~~l~~~v~~~s~nPAkifgl~~~dADlvi~--~~~~~v~~~~~~s~~~~spf~ 317 (329)
..+..++|++|+|+++|+|++.+++ +++|+++++++|+||||+|||+.+.+||+|| +++|+|+++.++|+++||||
T Consensus 234 ~~~~a~~G~~g~e~~lpl~~~~v~~~~i~l~~l~~~~s~nPAk~~gl~~~~~~lvi~d~~~~~~v~~~~~~s~~~~sp~- 312 (344)
T cd01316 234 TGNKPPPGFPGVETSLPLLLTAVHEGRLTIEDIVDRLHTNPKRIFNLPPQSDTYVEVDLDEEWTIPKNPLQSKKGWTPF- 312 (344)
T ss_pred cCCCCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCCCCCCCEEEEeCCCcEEEChhhccccCCCCCC-
Confidence 7544557999999999999986554 7899999999999999999996545699999 59999999999999999999
Q ss_pred CCcEEEEEEee
Q 020186 318 AGNTLEWQPSL 328 (329)
Q Consensus 318 ~G~~l~G~v~~ 328 (329)
+|++++|||++
T Consensus 313 ~G~~l~G~v~~ 323 (344)
T cd01316 313 EGKKVKGKVQR 323 (344)
T ss_pred CCCEEeeEEEE
Confidence 99999999975
No 8
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=100.00 E-value=2.6e-68 Score=511.64 Aligned_cols=304 Identities=19% Similarity=0.241 Sum_probs=265.4
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKL 82 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~ 82 (329)
|-||..+|++||||||++||||.|++++.+.++.+.+++++.+. |||++|+++ + +. +++.++.+.| +.|||+
T Consensus 26 ~~s~t~aA~~GGvTtv~~mPnt~P~~~~~~~~~~~~~~a~~~~~--vd~~~~~~~--~-~~--~~l~~~~~~~-~~g~k~ 97 (361)
T cd01318 26 FVSGSRAAAAGGVTTVMDMPNTKPPTTTAEALYEKLRLAAAKSV--VDYGLYFGV--T-GS--EDLEELDKAP-PAGYKI 97 (361)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCCcHHHHHHHHHHhccCce--eEEEEEEee--c-Ch--hhHHHHHHhh-CcEEEE
Confidence 45788999999999999999999999999999999888876555 999999886 3 22 4566777667 569999
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC---------------ChhHHHHHHHHHHHHHHHHh
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------------DIFDREKVFIDTILQPLIQR 147 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~---------------~~~~~E~~av~~~~~~~la~ 147 (329)
|+++. ++... .|+ ..|+++|++++ .++++||||+++.. .+..+|..+++|++ .+|+
T Consensus 98 f~~~~--~~~~~-~~~-~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~~~~~~~P~~aE~~av~r~~--~la~ 168 (361)
T cd01318 98 FMGDS--TGDLL-DDE-ETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGESAHPRIRDAEAAAVATARAL--KLAR 168 (361)
T ss_pred EEecC--CCCcC-CCH-HHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhccCCCCcCCHHHHHHHHHHHH--HHHH
Confidence 98642 11222 344 89999999986 78999999987521 13578999999999 9999
Q ss_pred cCCCeEEEEecCCHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeE
Q 020186 148 LPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFF 227 (329)
Q Consensus 148 ~~~~~lhi~HvSt~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~ 227 (329)
++|+|+||+|+||++++++|+++| .+||||||||||+||++++. .+|+++||+||||+++||++||++|++|.|| +
T Consensus 169 ~~~~~~hi~Hvs~~~~~~~i~~~k-~~vt~ev~ph~L~l~~~~~~--~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id-~ 244 (361)
T cd01318 169 RHGARLHICHVSTPEELKLIKKAK-PGVTVEVTPHHLFLDVEDYD--RLGTLGKVNPPLRSREDRKALLQALADGRID-V 244 (361)
T ss_pred HHCCCEEEEeCCCHHHHHHHHHhC-CCeEEEeCHHHhhcCHHHHh--cCCCeEEEeCCCCCHHHHHHHHHHHhCCCCC-E
Confidence 999999999999999999999998 89999999999999999986 3688999999999999999999999999999 9
Q ss_pred EecCCCCCCcCcccccC--CcCCccchhHHHHHHHHHHHh-cCCHHHHHHHHhhhhhhhcCCCC-C------cccEEEE-
Q 020186 228 LGTDSAPHERGRKECAC--GCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLT- 296 (329)
Q Consensus 228 i~SDHaPh~~~eK~~~~--~~~Gi~~~e~~lpll~~~~~~-~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi~- 296 (329)
|+|||+||+.++|..+| .++|++|+|+++|++++.+.+ +++++++++++|.||||+||++. | +|||+||
T Consensus 245 i~SDh~P~~~~~k~~~~~~a~~G~~g~e~~l~~~~~~v~~~~l~l~~a~~~~t~nPA~~lgl~~~G~i~~G~~ADlvv~d 324 (361)
T cd01318 245 IASDHAPHTLEEKRKGYPAAPSGIPGVETALPLMLTLVNKGILSLSRVVRLTSHNPARIFGIKNKGRIAEGYDADLTVVD 324 (361)
T ss_pred EeeCCCCCCHHHccCChhhCCCCCccHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCccCCCCcCCEEEEe
Confidence 99999999999998665 346999999999999876554 68999999999999999999974 4 7999999
Q ss_pred -ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 297 -KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 297 -~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+++|+++.++++|+++|||| +|++++|||++
T Consensus 325 ~~~~~~v~~~~~~s~~~~tp~-~G~~l~G~v~~ 356 (361)
T cd01318 325 LKEERTIRAEEFHSKAGWTPF-EGFEVTGFPVM 356 (361)
T ss_pred CCCCEEECHHHccccCCCCCC-CCCEEeeEEEE
Confidence 69999999999999999999 99999999986
No 9
>PRK01211 dihydroorotase; Provisional
Probab=100.00 E-value=2.4e-68 Score=518.26 Aligned_cols=289 Identities=18% Similarity=0.229 Sum_probs=243.6
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKL 82 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~ 82 (329)
|.||..||++||||||+|||||.|++++.+.++.+.+++++.+. |||++|+++ . +.+ .+ +.+.| +.+||+
T Consensus 66 ~~s~s~AAaaGGvTtv~dmPnt~P~~~~~e~~~~~~~~a~~~s~--vd~~~~~~~--~-~~~-~~---~~~~g-~~~~k~ 135 (409)
T PRK01211 66 FSTGTLSAIFGGTTFIMDMPNNNIPIKDYNAFSDKLGRVAPKAY--VDFSLYSME--T-GNN-AL---ILDER-SIGLKV 135 (409)
T ss_pred HHHHHHHHHcCCcEEEEECCCCCCCCChHHHHHHHHHHhccCce--eeEEEEecc--C-Cch-hh---HHhcc-CcEEEE
Confidence 56889999999999999999999999999999999988877665 999999875 2 222 23 33447 469999
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC---------------ChhHHHHHHHHHHHHHHHHh
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------------DIFDREKVFIDTILQPLIQR 147 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~---------------~~~~~E~~av~~~~~~~la~ 147 (329)
||++.+.+++..+ ..+.|++++++|.++++||||++++. .+..+|..++.+++ .+|+
T Consensus 136 f~~~~~~~~~~~~------~~~~l~~~~~~g~~v~~H~E~~~l~~~~~~~~~~~~~~~~~rP~~aE~~ai~~~~--~la~ 207 (409)
T PRK01211 136 YMGGTTNTNGTDI------EGGEIKKINEANIPVFFHAELSECLRKHQFESKNLRDHDLARPIECEIKAVKYVK--NLDL 207 (409)
T ss_pred EcCCCcCCCcccc------CHHHHHHHHccCCEEEEeccChHHhhhhhhCcchHhhCCCCCCHHHHHHHHHHHH--HHhC
Confidence 9864221211222 22466778899999999999987631 13578999999998 8888
Q ss_pred cCCCeEEEEecCCHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeE
Q 020186 148 LPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFF 227 (329)
Q Consensus 148 ~~~~~lhi~HvSt~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~ 227 (329)
+ ++||+|+||++++ .+||||||||||+||+++ . +++++|||||||+++||++||++|++|+|| +
T Consensus 208 ~---~~hi~HvSt~~~~--------~~vt~Ev~phhL~l~~~~-~---~~~~~kvnPPLRs~~d~~aL~~~l~dG~ID-~ 271 (409)
T PRK01211 208 K---TKIIAHVSSIDVI--------GRFLREVTPHHLLLNDDM-P---LGSYGKVNPPLRDRWTQERLLEEYISGRFD-I 271 (409)
T ss_pred C---CcEEEEecChhhc--------CceEEEecHHHHcccccc-c---cCCceeEcCCCCCHHHHHHHHHHHhCCCCC-E
Confidence 7 6999999999998 279999999999999887 2 478999999999999999999999999999 9
Q ss_pred EecCCCCCCcCcccccC--CcCCccchhHHHHHHHHHHHh-cCCHHHHHHHHhhhhhhhcCCCCC------cccEEEE--
Q 020186 228 LGTDSAPHERGRKECAC--GCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPRN------TSKIKLT-- 296 (329)
Q Consensus 228 i~SDHaPh~~~eK~~~~--~~~Gi~~~e~~lpll~~~~~~-~~~l~~~v~~~s~nPAkifgl~~~------dADlvi~-- 296 (329)
|+||||||+.++|. +| .++|++|+|+++|+||+.+++ +++++++++++|+||||+|||++| +||||||
T Consensus 272 i~SDHaP~~~~eK~-~~~~a~~G~~gle~~lpl~~~~v~~~~isl~~~v~~~s~nPAki~gl~kG~l~~G~~ADlvi~D~ 350 (409)
T PRK01211 272 LSSDHAPHTEEDKQ-EFEYAKSGIIGVETRVPLFLALVKKKILPLDVLYKTAIERPASLFGIKKGKIEEGYDADFMAFDF 350 (409)
T ss_pred EeCCCCCCChhHhC-CHhhCCCCCCcHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCcccCCCcCCEEEEcC
Confidence 99999999999993 44 457999999999999976544 689999999999999999999644 8999999
Q ss_pred ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 297 KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 297 ~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+++|+|+.++++|+++|||| +|++++ +|.+
T Consensus 351 ~~~~~v~~~~~~s~~~~spf-~G~~~~-~v~~ 380 (409)
T PRK01211 351 TNIKKINDKRLHSKCPVSPF-NGFDAI-FPSH 380 (409)
T ss_pred CCeEEEChHHhhccCCCCCC-CCCEec-cEEE
Confidence 69999999999999999999 999987 7764
No 10
>PRK07627 dihydroorotase; Provisional
Probab=100.00 E-value=2.4e-67 Score=514.91 Aligned_cols=308 Identities=15% Similarity=0.130 Sum_probs=266.5
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeC-CCCCHHHHHHHHhcCceeEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLT-DTTSPDEIKLARKTGVVFAVK 81 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~-~~~~~~el~~l~~~G~v~~~K 81 (329)
|.|+..+|++||||||++|||+.|+.++.+.++.+..+.+..+. +|+.+++.++.+ .+.+++++.+|.+.|+ ++||
T Consensus 75 ~~t~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~i~~l~~~G~-~~fk 151 (425)
T PRK07627 75 LESEMAAAVAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQ--AHVYPLGALTVGLKGEVLTEMVELTEAGC-VGFS 151 (425)
T ss_pred HHHHHHHHHhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCc--eeEEEeCeEEcCCCccCHHHHHHHHhCCE-EEEE
Confidence 46889999999999999999999999998887777666554443 787667665433 3457889999998894 6999
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC-----------------ChhHHHHHHHHHHHHHH
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------------DIFDREKVFIDTILQPL 144 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~-----------------~~~~~E~~av~~~~~~~ 144 (329)
.|. ....|+ ..++++|++++++|+++++||||..+.. .+..+|..++.|++ .
T Consensus 152 ~~~--------~~~~~~-~~l~~~~~~~~~~~~~v~~H~E~~~~~~~~~~~~g~~~~~~~~~~~P~~aE~~av~r~~--~ 220 (425)
T PRK07627 152 QAN--------VPVVDT-QVLLRALQYASTFGFTVWLRPLDAFLGRGGVAASGAVASRLGLSGVPVAAETIALHTIF--E 220 (425)
T ss_pred cCC--------cccCCH-HHHHHHHHHHHhcCCEEEEecCChhhhhCCCcCCCHhHHHcCCCCCCHHHHHHHHHHHH--H
Confidence 652 112344 7899999999999999999999986531 13478999999999 9
Q ss_pred HHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcC
Q 020186 145 IQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG 222 (329)
Q Consensus 145 la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G 222 (329)
+|+++|+|+||+|+||++++++|+++|+ .+||||||||||+|+++++. .+++++|||||||+++||++||++|++|
T Consensus 221 la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~~~--~~~~~~k~~PPLR~~~d~~~L~~~l~~G 298 (425)
T PRK07627 221 LMRVTGARVHLARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDVDIG--YFDSQFRLDPPLRSQRDREAIRAALADG 298 (425)
T ss_pred HHHHHCCcEEEEeCCCHHHHHHHHHHHHCCCCeEEEeccchheEeHhHHh--ccCCceEEeCCCCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999986 79999999999999999986 3588999999999999999999999999
Q ss_pred CCCeEEecCCCCCCcCcccccCC--cCCccchhHHHHHHHHHHH-hcCCHHHHHHHHhhhhhhhcCCCCC------cccE
Q 020186 223 SRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFE-EMGALDKLEAFTSFNGPDFYGLPRN------TSKI 293 (329)
Q Consensus 223 ~Id~~i~SDHaPh~~~eK~~~~~--~~Gi~~~e~~lpll~~~~~-~~~~l~~~v~~~s~nPAkifgl~~~------dADl 293 (329)
.|| +|+||||||+.++|..+|. ++|++|+|+.+|++++.+. ++++++++++++|.|||++||++.| +|||
T Consensus 299 ~id-~i~SDHaP~~~~~k~~~~~~~~~G~~g~e~~~pl~~~~~~~~~i~~~~~l~~~t~~pA~~lg~~~G~l~~G~~ADl 377 (425)
T PRK07627 299 TID-AICSDHTPVDDDEKLLPFAEATPGATGLELLLPLTLKWADEAKVPLARALARITSAPARVLGLPAGRLAEGAPADL 377 (425)
T ss_pred CCc-EEEcCCCCCCHHHccCCHhhCCCCceeHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhCCCCCcccCCCcCCE
Confidence 999 9999999999999986663 4699999999999886554 4789999999999999999999544 7999
Q ss_pred EEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 294 KLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 294 vi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
++| +++|+++.++++|+++|||| +|++++|+|++
T Consensus 378 vv~d~~~~~~v~~~~~~s~~~~sp~-~g~~~~g~v~~ 413 (425)
T PRK07627 378 CVFDPDAHWRVEPRALKSQGKNTPF-LGYELPGRVRA 413 (425)
T ss_pred EEECCCCcEEEChhhccccCCCCCC-cCCEeeeEEEE
Confidence 999 57899999999999999999 99999999865
No 11
>PRK05451 dihydroorotase; Provisional
Probab=100.00 E-value=2.5e-66 Score=495.16 Aligned_cols=310 Identities=65% Similarity=1.062 Sum_probs=258.9
Q ss_pred CccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEeeccccccCCC
Q 020186 14 HYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQD 93 (329)
Q Consensus 14 GvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f~~~~~~~~~~ 93 (329)
++|++++|||+.|+.++.+.++.+.+++++.+...+||.++++++...+...+||+++.+.|+++|||+||++...+.+.
T Consensus 33 ~~t~~v~mPnt~P~~~~~~~l~~~~~~a~~~~~~~~d~~~~~~i~~~~~~~~~El~~~~~~Gvv~g~Kl~~~~~~~~~~~ 112 (345)
T PRK05451 33 QFGRAIVMPNLVPPVTTVAQALAYRERILAALPAGSNFEPLMTLYLTDNTDPDELERAKASGVVTAAKLYPAGATTNSDA 112 (345)
T ss_pred hcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCCcEEEEEEEEeCCCCCHHHHHHHHHCCCEEEEEEecccCccCCcc
Confidence 39999999999999999999999888887653312799988887544334578999999889666999999752112223
Q ss_pred CccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhc-CCCeEEEEecCCHHHHHHHHcccC
Q 020186 94 GVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRL-PQLKVVMEHITTMDAVKFVESCKE 172 (329)
Q Consensus 94 ~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~-~~~~lhi~HvSt~~sl~~i~~ak~ 172 (329)
++.|+ ..++++|++++++|.++++||||.++.......|..++.+.+. .+|+. +|+|+||+|+||++++++|++|+
T Consensus 113 ~~~dd-~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~~~e~~~~~~~l~-~lA~~~pg~~lhI~Hlst~~~~e~i~~a~- 189 (345)
T PRK05451 113 GVTDI-EKIYPVLEAMQKLGMPLLVHGEVTDPDIDIFDREAVFIDRVLE-PLRRRFPKLKIVFEHITTKDAVDYVREAN- 189 (345)
T ss_pred CcCCH-HHHHHHHHHHHHcCCEEEEecCCCCcccccccchHHHHHHHHH-HHHHhcCCCcEEEEecCcHHHHHHHHhcC-
Confidence 44455 8999999999999999999999965422223446666766542 47844 49999999999999999999886
Q ss_pred CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeE-EecCCCCCCcCcccccCCcCCccc
Q 020186 173 GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFF-LGTDSAPHERGRKECACGCAGIYN 251 (329)
Q Consensus 173 ~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~-i~SDHaPh~~~eK~~~~~~~Gi~~ 251 (329)
.+||||||||||+||++++...++++++|||||||+++||++||++|++|.|| + |+||||||+.++|..++|.+|+++
T Consensus 190 ~~it~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id-~~i~SDHaP~~~~~K~~~~G~~gi~~ 268 (345)
T PRK05451 190 DNLAATITPHHLLINRNDMLVGGIRPHLYCLPILKRETHRQALREAATSGNPK-FFLGTDSAPHARHAKESACGCAGIFS 268 (345)
T ss_pred CCEEEEecHHHHhcCHHHHhCCCcCCCeEEeCCCCCHHHHHHHHHHHHcCCCC-EEEeCCCCCCChHHhCCCCCCCchhh
Confidence 79999999999999999875323578899999999999999999999999999 7 999999999999987777788888
Q ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHhhhhhhhcCCCCCcccEEEEecceeecCCccCcCCcccccCCCcEEEEEEe
Q 020186 252 APVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPS 327 (329)
Q Consensus 252 ~e~~lpll~~~~~~~~~l~~~v~~~s~nPAkifgl~~~dADlvi~~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~ 327 (329)
.+..+|+++..++++++|++++++||+||||+|||+...+.|++.+++|+|+++.++|+++||||++|.+|+|+|.
T Consensus 269 ~~~g~~~~~~~~~~~~~l~~~v~~~s~nPAkifGl~~~KG~i~~~~~~~~v~~~~~~s~~~~sp~~~~~~~~~~~~ 344 (345)
T PRK05451 269 APAALELYAEVFEEAGALDKLEAFASLNGPDFYGLPRNTDTITLVREPWTVPESIPFGDETVVPFRAGETLRWSVK 344 (345)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHhHHHHHHhCCCCCCCeEEEEecceecCcccccCCCceeeecCCceeeeEec
Confidence 7778899887776667999999999999999999943237788889999999999999999999999999999985
No 12
>PLN02599 dihydroorotase
Probab=100.00 E-value=3.1e-66 Score=494.78 Aligned_cols=316 Identities=78% Similarity=1.242 Sum_probs=268.4
Q ss_pred hcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEeeccccc
Q 020186 10 CSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATT 89 (329)
Q Consensus 10 Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f~~~~~~ 89 (329)
..+||||++++|||+.||+++.+.++.+++++++.+...+||.+|++++++++...+||.++.+.|++.+||+||.+..+
T Consensus 47 ~~~gg~t~~i~MPn~~Ppv~~~~~~~~~~~~~~~~~~~~vdf~~~~~l~lt~~~~l~Ei~~~~~~Gvv~gfKlyp~~~tt 126 (364)
T PLN02599 47 HSARHFGRAIVMPNLKPPVTTTARALAYRERIMKALPPGSSFEPLMTLYLTDNTTPEEIKAAKASGVVFAVKLYPAGATT 126 (364)
T ss_pred HhcCCcCEEEECCCCCCCcCCHHHHHHHHHHHhhhcCCCcceEEEEEEecCCCCCHHHHHHHHHCCCcEEEEECcccCcC
Confidence 46899999999999999999999999999998876221289999999866644568899999888954499999976544
Q ss_pred cCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHc
Q 020186 90 NSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVES 169 (329)
Q Consensus 90 ~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~sl~~i~~ 169 (329)
+++.++.|. +.++++|++++++|.++++||||.+...+....|...+.|++...+++++|+|+||+|+||++++++|++
T Consensus 127 ~s~~gv~d~-~~l~~~le~~~e~G~~L~vH~E~~~~~~~~~~~E~~~i~r~l~~~la~~~g~kI~i~HiSt~~~ve~v~~ 205 (364)
T PLN02599 127 NSQAGVTDL-GKCLPVLEEMAEQGMPLLVHGEVTDPSVDIFDREKVFIDTILAPLVQKLPQLKIVMEHITTMDAVEFVES 205 (364)
T ss_pred CCccccCCH-HHHHHHHHHHHhcCCEEEEecCCCcccccccccHHHHHHHHHHHHHHhccCCeEEEEecChHHHHHHHHh
Confidence 556677776 8999999999999999999999976533344557666777764358999999999999999999999999
Q ss_pred ccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCC-CeEEecCCCCCCcCcccccCCcCC
Q 020186 170 CKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR-KFFLGTDSAPHERGRKECACGCAG 248 (329)
Q Consensus 170 ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~I-d~~i~SDHaPh~~~eK~~~~~~~G 248 (329)
+|+.+|+||||||||+||++++..+++++++|||||||+++||++||+++.+|.| | +|+||||||+.++|+.++|.+|
T Consensus 206 ak~~~vtae~tpHhL~l~~~~~~~~~~~~~~k~~PPlR~~~dr~aL~~al~~G~i~~-~i~SDHaPh~~~~K~~~~g~~G 284 (364)
T PLN02599 206 CGDGNVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREALVKAATSGSKKF-FLGTDSAPHPKRAKEASCGCAG 284 (364)
T ss_pred ccCCCEEEEecHHHHhcCHHHHhccCCCCCeEEECCCCCHHHHHHHHHHHHcCCCCE-EEecCCCCCChHHhcCCCCCCC
Confidence 8833899999999999999998643467889999999999999999999999996 8 9999999999999998888899
Q ss_pred ccchhHHHHHHHHHHHhcCCHHHHHHHHhhhhhhhcCCCCCcccEEEEecceeecCCccCcCCcccccCCCcEEEEEEe
Q 020186 249 IYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPS 327 (329)
Q Consensus 249 i~~~e~~lpll~~~~~~~~~l~~~v~~~s~nPAkifgl~~~dADlvi~~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~ 327 (329)
+++.++.+|++++.+++.++|+++++++|.||||+||||+....|++.+++|+|.+.-..+.....||..|++|.++|+
T Consensus 285 i~~~~~~l~~l~~~~~~~g~l~~l~~~~S~npA~~~gL~~~kg~i~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~w~~~ 363 (364)
T PLN02599 285 IYSAPVALSLYAKAFEEAGALDKLEAFTSFNGPDFYGLPRNTSTITLVKSAWKVPEAYSFGGGTVVPMFAGETIPWSVV 363 (364)
T ss_pred cccHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHhCCCCCCCeEEEEECCccCCCEeecCCCeEeeecCCCeeeeeec
Confidence 9999999999888777655999999999999999999974347899889999997543323333779999999999986
No 13
>PRK08044 allantoinase; Provisional
Probab=100.00 E-value=6e-67 Score=515.69 Aligned_cols=313 Identities=16% Similarity=0.156 Sum_probs=272.0
Q ss_pred eecccchhcccCccEEEECC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEE
Q 020186 3 WITILPICSVSHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVK 81 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmP-nt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K 81 (329)
+.++..+|++||||||+||| |+.|++++.+.++.+.+++++.+. |||.+|+++ . ..+.+++.+|.+.|+ .+||
T Consensus 73 ~~~~~~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~--vd~~~~~~~--~-~~~~~ei~~l~~~gv-~~fk 146 (449)
T PRK08044 73 YETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLT--IDAAQLGGL--V-SYNLDRLHELDEVGV-VGFK 146 (449)
T ss_pred HHHHHHHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCe--eeEEEEeee--C-CCCHHHHHHHHHcCc-eEEE
Confidence 45778999999999999999 788999999999998888776655 999999886 3 346889999998895 5999
Q ss_pred Eeeccccc---cCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC--------------------ChhHHHHHHHH
Q 020186 82 LYPAGATT---NSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------------------DIFDREKVFID 138 (329)
Q Consensus 82 ~f~~~~~~---~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~--------------------~~~~~E~~av~ 138 (329)
+||++... +++....++ ..++++|++++++|.++++||||.+++. .+..+|..++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~~~G~~~~~~~~~~~P~~~E~~~v~ 225 (449)
T PRK08044 147 CFVATCGDRGIDNDFRDVND-WQFYKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIR 225 (449)
T ss_pred EEecccCcccccCCccCcCH-HHHHHHHHHHHhcCCEEEEecCCHHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHH
Confidence 99865211 112222344 7899999999999999999999987520 12468999999
Q ss_pred HHHHHHHHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHH
Q 020186 139 TILQPLIQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVV 216 (329)
Q Consensus 139 ~~~~~~la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw 216 (329)
+++ .+|+++|+|+||+|+|+++++++++++|+ .++|||||||||+||++++.. +|+.+|||||||+++||++||
T Consensus 226 r~~--~lA~~~g~~vhi~HiSt~~~~~~i~~ak~~G~~it~e~~~h~L~l~~~~~~~--~~~~~k~~PPlr~~~d~~aL~ 301 (449)
T PRK08044 226 RVL--YLAKVAGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEE--IGTLAKCSPPIRDLENQKGMW 301 (449)
T ss_pred HHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEcChhhhcccHHHhhC--CCCcEEEcCCCCChHHHHHHH
Confidence 999 89999999999999999999999999886 799999999999999999863 588999999999999999999
Q ss_pred HHHHcCCCCeEEecCCCCCCcCcccccC--CcCCccchhHHHHHHHHHHH--hcCCHHHHHHHHhhhhhhhcCCCC-C--
Q 020186 217 SAVTSGSRKFFLGTDSAPHERGRKECAC--GCAGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYGLPR-N-- 289 (329)
Q Consensus 217 ~al~~G~Id~~i~SDHaPh~~~eK~~~~--~~~Gi~~~e~~lpll~~~~~--~~~~l~~~v~~~s~nPAkifgl~~-~-- 289 (329)
++|++|.|| +|+|||+||+.++|..++ .++|++|+|+.||++++.++ +.++++++++++|.||||+||+++ |
T Consensus 302 ~~l~~G~id-~i~sDH~P~~~~~K~~~~~~~~~g~~g~e~~l~~~~~~~v~~~~l~~~~~v~~~s~npA~~lgl~~~G~i 380 (449)
T PRK08044 302 EKLFNGEID-CLVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRI 380 (449)
T ss_pred HHHhCCCce-EEEcCCCCCChHHccCChhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCCCCCcC
Confidence 999999999 999999999999997665 34699999999999986543 368999999999999999999963 3
Q ss_pred ----cccEEEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 290 ----TSKIKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 290 ----dADlvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+|||+|| +++|+|++++++|+++|||| +|++++|||++
T Consensus 381 ~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~-~G~~l~G~v~~ 424 (449)
T PRK08044 381 APGKDADFVFIQPNSSYVLKNEDLEYRHKVSPY-VGRTIGARITK 424 (449)
T ss_pred CCCCccCEEEECCCCcEEECHHHccccCCCCCC-CCCEEeeeEEE
Confidence 7999999 68999999999999999999 99999999975
No 14
>PRK08417 dihydroorotase; Provisional
Probab=100.00 E-value=6.3e-66 Score=499.65 Aligned_cols=296 Identities=17% Similarity=0.188 Sum_probs=253.3
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCC-ccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPAS-SNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVK 81 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~-vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K 81 (329)
|-|+..+|++||||||++||||.|++++.+.++.+.+++++. ..+ +||. .++ ..+.+.+++..+.+.|+ .+||
T Consensus 49 ~~t~s~aA~aGGvTtv~dmpnt~P~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~-~~~~~~~~i~~l~~~Gv-~~~k 122 (386)
T PRK08417 49 LKSLENECLKGGVGSIVLYPDSTPAIDNEIALELINSAQREL-PMQIFPSI---RAL-DEDGKLSNIATLLKKGA-KALE 122 (386)
T ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCCCCHHHHHHHHHHhhcc-CCcEEEEE---EEE-CCCccHHHHHHHHHCCC-EEEE
Confidence 358899999999999999999999999999998887776642 211 5552 232 33446889999998895 5888
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC-----------------ChhHHHHHHHHHHHHHH
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------------DIFDREKVFIDTILQPL 144 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~-----------------~~~~~E~~av~~~~~~~ 144 (329)
++. .. +. ..++++|++++++|+++++||||.++.. .+..+|..++.|++ .
T Consensus 123 ~~~---------~~-~~-~~l~~~~~~a~~~g~~V~~HaEd~~~~~~~~~~~g~~~~~~~~~~rp~~aE~~~v~~~~--~ 189 (386)
T PRK08417 123 LSS---------DL-DA-NLLKVIAQYAKMLDVPIFCRCEDSSFDDSGVMNDGELSFELGLPGIPSIAETKEVAKMK--E 189 (386)
T ss_pred CCC---------CC-CH-HHHHHHHHHHHHcCCEEEEeCCCHHHhhHHHHhcChhhHHhCCCCCCHHHHHHHHHHHH--H
Confidence 641 12 33 7899999999999999999999976531 13478999999999 9
Q ss_pred HHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcC
Q 020186 145 IQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG 222 (329)
Q Consensus 145 la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G 222 (329)
+|+++|+|+||+|+||++++++|+++|+ .+||||||||||+||++++. .+++++|||||||+++||++||++|++|
T Consensus 190 la~~~~~~lhi~hvS~~~~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~--~~~~~~k~~PPlR~~~d~~~L~~~l~~g 267 (386)
T PRK08417 190 LAKFYKNKVLFDTLALPRSLELLDKFKSEGEKLLKEVSIHHLILDDSACE--NFNTAAKLNPPLRSKEDRLALLEALKEG 267 (386)
T ss_pred HHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEechHHHeeCHHHhc--CcCcccEECCCCCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999986 79999999999999999985 3678999999999999999999999999
Q ss_pred CCCeEEecCCCCCCcCcccccC--CcCCccchhHHHHHHHHHHH-h-cCCHHHHHHHHhhhhhhhcCCCCC------ccc
Q 020186 223 SRKFFLGTDSAPHERGRKECAC--GCAGIYNAPVALSLYAKVFE-E-MGALDKLEAFTSFNGPDFYGLPRN------TSK 292 (329)
Q Consensus 223 ~Id~~i~SDHaPh~~~eK~~~~--~~~Gi~~~e~~lpll~~~~~-~-~~~l~~~v~~~s~nPAkifgl~~~------dAD 292 (329)
+|| +|+||||||+.++|..+| .++|++|+|+++|++|+.++ . .++++++++++|.||||+||+++| +||
T Consensus 268 ~Id-~i~SDHaP~~~~~K~~~~~~a~~G~~g~e~~~~~~~~~~v~~~~~~~~~~~~~~t~~pA~~lgl~~G~l~~G~~AD 346 (386)
T PRK08417 268 KID-FLTSLHSAKSNSKKDLAFDEAAFGIDSICEYFSLCYTYLVKEGIITWSELSRFTSYNPAQFLGLNSGEIEVGKEAD 346 (386)
T ss_pred Cce-EEEcCCCCCCHHHccCCHhHCCCCchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCCCCCccCCCCcCC
Confidence 999 999999999999997665 45799999999999997543 3 579999999999999999999644 799
Q ss_pred EEEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 293 IKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 293 lvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
|++| +.+|+++. +|||| +|++++|+|.+
T Consensus 347 lvi~d~~~~~~~~~-------~~~p~-~g~~~~g~v~~ 376 (386)
T PRK08417 347 LVLFDPNESTIIDD-------NFSLY-SGDELYGKIEA 376 (386)
T ss_pred EEEEcCCCCeEeCC-------CCCCc-cCCEEeccEEE
Confidence 9999 57899984 69999 99999999865
No 15
>PLN02795 allantoinase
Probab=100.00 E-value=6.9e-66 Score=514.08 Aligned_cols=314 Identities=17% Similarity=0.179 Sum_probs=265.1
Q ss_pred ecccchhcccCccEEEECC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEE
Q 020186 4 ITILPICSVSHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKL 82 (329)
Q Consensus 4 ~~~~~~Aa~GGvTtvidmP-nt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~ 82 (329)
-++..+|++|||||++||| |+.|+.++.+.++.+.+.+.+.+. +||++|.++.-....+.+++.++.+.|+ .+||+
T Consensus 120 ~~~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~~~~~~~--vd~~~~~~~~~~~~~~~~~l~~~~~~G~-~g~k~ 196 (505)
T PLN02795 120 PTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAKGKLY--VDVGFWGGLVPENAHNASVLEELLDAGA-LGLKS 196 (505)
T ss_pred HHHHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHHhccCce--eeeeceecccCcchhHHHHHHHHHHCCC-cEEEE
Confidence 3577889999999999999 678989999988877776655444 8999987652111134667888888885 58999
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC------------------ChhHHHHHHHHHHHHHH
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------------------DIFDREKVFIDTILQPL 144 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~------------------~~~~~E~~av~~~~~~~ 144 (329)
||++.. ..+....++ ..++++|++++++|.++.+||||.+++. .+..+|.+++.+++ .
T Consensus 197 f~~~~~-~~~~~~~~~-~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~~~~~~~~~~~~~rP~~aE~~ai~~~~--~ 272 (505)
T PLN02795 197 FMCPSG-INDFPMTTA-THIKAALPVLAKYGRPLLVHAEVVSPVESDSRLDADPRSYSTYLKSRPPSWEQEAIRQLL--E 272 (505)
T ss_pred EecccC-CCCcccCCH-HHHHHHHHHHHHhCCEEEEecCChhHhhhhhhhhcCCcChhHhcccCCHHHHHHHHHHHH--H
Confidence 986421 122334455 8999999999999999999999987421 13468999999999 8
Q ss_pred HHhcC-------CCeEEEEecCCH-HHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHH
Q 020186 145 IQRLP-------QLKVVMEHITTM-DAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQA 214 (329)
Q Consensus 145 la~~~-------~~~lhi~HvSt~-~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~a 214 (329)
+|+.+ |+|+||+|+||+ +++++|+++|+ .+||||||||||+||++++. .+++++|||||||+++||++
T Consensus 273 la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev~ph~L~l~~~~~~--~~~~~~k~~PPLR~~~d~~a 350 (505)
T PLN02795 273 VAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVETCPHYLAFSAEEIP--DGDTRYKCAPPIRDAANREL 350 (505)
T ss_pred HHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEEeChhhhcccHHHcc--CCCCceEEcCCCCChHHHHH
Confidence 99999 999999999999 99999999986 78999999999999999986 35899999999999999999
Q ss_pred HHHHHHcCCCCeEEecCCCCCCcCccccc---C--CcCCccchhHHHHHHHHHH-HhcCCHHHHHHHHhhhhhhhcCCCC
Q 020186 215 VVSAVTSGSRKFFLGTDSAPHERGRKECA---C--GCAGIYNAPVALSLYAKVF-EEMGALDKLEAFTSFNGPDFYGLPR 288 (329)
Q Consensus 215 Lw~al~~G~Id~~i~SDHaPh~~~eK~~~---~--~~~Gi~~~e~~lpll~~~~-~~~~~l~~~v~~~s~nPAkifgl~~ 288 (329)
||++|++|+|| +|+||||||+.++|..+ | .++|++|+|+++|++|+.+ ++.++++++++++|.||||+||+++
T Consensus 351 L~~al~~G~Id-~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~~~~~~~~~~~l~l~~~v~~~s~~pA~~~gl~~ 429 (505)
T PLN02795 351 LWKALLDGDID-MLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPATWTAGRAYGLTLEQLARWWSERPAKLAGLDS 429 (505)
T ss_pred HHHHHhCCCce-EEecCCCCCChHHhccCcCCHhhCCCCceeHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999 99999999999999643 4 4579999999999999754 4468999999999999999999953
Q ss_pred -C------cccEEEE--ecceeecCCc-cCcCCc-ccccCCCcEEEEEEee
Q 020186 289 -N------TSKIKLT--KIPWKVPEAF-SFSFGD-IIPMFAGNTLEWQPSL 328 (329)
Q Consensus 289 -~------dADlvi~--~~~~~v~~~~-~~s~~~-~spf~~G~~l~G~v~~ 328 (329)
| +|||+|| +++|+|+.+. ++|+++ |||| +|++++|+|++
T Consensus 430 ~G~l~~G~~ADlvi~d~~~~~~v~~~~~~~s~~~~~sp~-~G~~l~g~v~~ 479 (505)
T PLN02795 430 KGAIAPGKDADIVVWDPEAEFVLDESYPIYHKHKSLSPY-LGTKLSGKVIA 479 (505)
T ss_pred CCccCCCCccCEEEEcCCcceEECcchhhhhcCCCcCCC-CCeEEEeEEEE
Confidence 4 7999999 6899999875 799997 9999 99999999975
No 16
>PRK04250 dihydroorotase; Provisional
Probab=100.00 E-value=4e-64 Score=488.13 Aligned_cols=295 Identities=19% Similarity=0.193 Sum_probs=247.9
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKL 82 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~ 82 (329)
|-+++.+|++|||||+++|||+.|++++.+.+..+.+.+++.+. |||++|+ + . +.+.+++.++.+ + +||+
T Consensus 67 ~~~~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~--vd~~~~~-~--~-~~~~~~l~~l~~-~---~~k~ 136 (398)
T PRK04250 67 IESGTKAALHGGITLVFDMPNTKPPIMDEKTYEKRMRIAEKKSY--ADYALNF-L--I-AGNCEKAEEIKA-D---FYKI 136 (398)
T ss_pred HHHHHHHHHhCCeEEEEECCCCCCCCCcHHHHHHHHHHhCcCce--eeEEEEE-e--c-CCCHHHHHHHHh-h---heEE
Confidence 45788999999999999999999999999999998888777655 9999998 5 3 345667887753 2 5899
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC----ChhHHHHHHHHHHHHHHHHhcCCCeEEEEec
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV----DIFDREKVFIDTILQPLIQRLPQLKVVMEHI 158 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~----~~~~~E~~av~~~~~~~la~~~~~~lhi~Hv 158 (329)
||.+ ++++ +.. +.+... .++.+.++++||||.++.. .+..+|..++.|++ .+|+++|+|+||+|+
T Consensus 137 f~~~--~~~~--~~~--~~~~~~---~~~~~~~v~~H~E~~~~~~~~~~~p~~aE~~av~r~~--~la~~~~~~lhi~Hv 205 (398)
T PRK04250 137 FMGA--STGG--IFS--ENFEVD---YACAPGIVSVHAEDPELIREFPERPPEAEVVAIERAL--EAGKKLKKPLHICHI 205 (398)
T ss_pred EEec--CCCc--hhH--HHHHHH---HHhcCCeEEEEecChhhhhcccCCCHHHHHHHHHHHH--HHHHHhCCCEEEEeC
Confidence 9854 1211 111 112211 2334667999999987642 24679999999999 999999999999999
Q ss_pred CCHHHHHHHHcccCCc-eEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCc
Q 020186 159 TTMDAVKFVESCKEGF-VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHER 237 (329)
Q Consensus 159 St~~sl~~i~~ak~~~-vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~ 237 (329)
||++++++|+++. .+ ||||||||||+||++++. +++++|||||||+++||++||++|. +|| +|+||||||+.
T Consensus 206 St~~~~~~i~~~g-~~~vt~Ev~ph~L~l~~~~~~---~~~~~k~~PPLR~~~d~~aL~~~l~--~Id-~i~sDHaP~~~ 278 (398)
T PRK04250 206 STKDGLKLILKSN-LPWVSFEVTPHHLFLTRKDYE---RNPLLKVYPPLRSEEDRKALWENFS--KIP-IIASDHAPHTL 278 (398)
T ss_pred CCHHHHHHHHHcC-CCcEEEEeCHHHhccCHHHHC---CCCceEEcCCCCCHHHHHHHHHhhc--cCC-EEEcCCcccCH
Confidence 9999999998643 55 999999999999999983 4789999999999999999999995 599 99999999999
Q ss_pred CcccccCCcCCccchhHHHHHHHHHHH-hcCCHHHHHHHHhhhhhhhcCCCC-C-----cccEEEE--ecceeecCCccC
Q 020186 238 GRKECACGCAGIYNAPVALSLYAKVFE-EMGALDKLEAFTSFNGPDFYGLPR-N-----TSKIKLT--KIPWKVPEAFSF 308 (329)
Q Consensus 238 ~eK~~~~~~~Gi~~~e~~lpll~~~~~-~~~~l~~~v~~~s~nPAkifgl~~-~-----dADlvi~--~~~~~v~~~~~~ 308 (329)
++|.. +.+|++|+|+++|+||+.++ ++++++++++++|.||||+||+++ | +|||+|| +++|+++.++++
T Consensus 279 ~~k~~--~~~G~~g~e~~lpl~~~~v~~~~lsl~~~v~~~t~npAk~lgl~~~GL~~G~~ADlvi~D~~~~~~v~~~~~~ 356 (398)
T PRK04250 279 EDKEA--GAAGIPGLETEVPLLLDAANKGMISLFDIVEKMHDNPARIFGIKNYGIEEGNYANFAVFDMKKEWTIKAEELY 356 (398)
T ss_pred HHhhc--CCCCcchHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCcCccCCCcCCEEEEcCCCcEEEChhhcc
Confidence 99963 45799999999999997654 478999999999999999999963 2 7999999 689999999999
Q ss_pred cCCcccccCCCcEEEEEEee
Q 020186 309 SFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 309 s~~~~spf~~G~~l~G~v~~ 328 (329)
|+++|||| +|++++|+|.+
T Consensus 357 s~~~~sp~-~g~~l~g~v~~ 375 (398)
T PRK04250 357 TKAGWTPY-EGFKLKGKVIM 375 (398)
T ss_pred ccCCCCCC-CCCEEeeEEEE
Confidence 99999999 99999999864
No 17
>PRK00369 pyrC dihydroorotase; Provisional
Probab=100.00 E-value=5.5e-64 Score=485.26 Aligned_cols=281 Identities=15% Similarity=0.166 Sum_probs=231.3
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKL 82 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~ 82 (329)
|.||..||++||||||++||||.|++++.+.++.+.+++++.+. |||++|+++ + .+.+++.++ | +.|||+
T Consensus 67 ~~sgs~AAa~GGvTtv~~mPnt~P~~~~~~~l~~~~~~a~~~~~--vd~~~~~~~--~--~~~~el~~~---~-~~g~k~ 136 (392)
T PRK00369 67 VASGTSEAAYGGVTLVADMPNTIPPLNTPEAITEKLAELEYYSR--VDYFVYSGV--T--KDPEKVDKL---P-IAGYKI 136 (392)
T ss_pred HHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCCe--EEEEEEeec--c--CCHHHHHHh---h-CceEEE
Confidence 56899999999999999999999999999999999998877665 999999865 3 234455544 6 469999
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC------ChhHHHHHHHHHHHHHHHHhcCCCeEEEE
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------DIFDREKVFIDTILQPLIQRLPQLKVVME 156 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~------~~~~~E~~av~~~~~~~la~~~~~~lhi~ 156 (329)
|+.. ..+. ..+.++ .+.+.++++||||++++. .+..+|..++.++. .+ +|+||+
T Consensus 137 f~~~--------~~~~-~~~~~~----~~~~~~v~~HaE~~~l~~~~~~~~rp~~aE~~ai~~~~--~~-----~~lhi~ 196 (392)
T PRK00369 137 FPED--------LERE-ETFRVL----LKSRKLKILHPEVPLALKSNRKLRRNCWYEIAALYYVK--DY-----QNVHIT 196 (392)
T ss_pred ECCC--------CchH-HHHHHH----HHhCCEEEEeCCCHHHhhcchhcccCHHHHHHHHHHHH--Hh-----CCEEEE
Confidence 9521 1332 334333 344489999999987632 12467888877765 44 899999
Q ss_pred ecCCHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCC
Q 020186 157 HITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHE 236 (329)
Q Consensus 157 HvSt~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~ 236 (329)
|+||+++++.+|+ ..||||||||||+||+++ ++++|||||||+++||++||++|++ || +|+||||||+
T Consensus 197 HvSt~~~v~~ak~---~gvt~Ev~pHhL~l~~~~------~~~~k~~PPLR~~~dr~aL~~~l~~--id-~i~SDHaP~~ 264 (392)
T PRK00369 197 HASNPRTVRLAKE---LGFTVDITPHHLLVNGEK------DCLTKVNPPIRDINERLWLLQALSE--VD-AIASDHAPHS 264 (392)
T ss_pred ECCCHHHHHHHHH---CCCeEEechhHheeccCC------CCceEEeCCCCCHHHHHHHHHHHHh--CC-EEEeCCCCCC
Confidence 9999999876543 359999999999999752 5689999999999999999999998 99 9999999999
Q ss_pred cCcccccCC--cCCccchhHHHHHHHHHHH-hcCCHHHHHHHHhhhhhhhcCCCCC------cccEEEEe-cceeecCCc
Q 020186 237 RGRKECACG--CAGIYNAPVALSLYAKVFE-EMGALDKLEAFTSFNGPDFYGLPRN------TSKIKLTK-IPWKVPEAF 306 (329)
Q Consensus 237 ~~eK~~~~~--~~Gi~~~e~~lpll~~~~~-~~~~l~~~v~~~s~nPAkifgl~~~------dADlvi~~-~~~~v~~~~ 306 (329)
.++|..+|. ++|++|+|+++|++|+.+. +.++++++++++|.||||+||++.+ +|||+||| ++|++ +.
T Consensus 265 ~~~K~~~f~~~~~Gi~GlE~~lpll~~~v~~~~lsl~~~v~~~s~nPA~ilgl~~g~i~~G~~ADlvi~d~~~~~~--~~ 342 (392)
T PRK00369 265 SFEKLQPYEVCPPGIAALSFTPPFIYTLVSKGILSIDRAVELISTNPARILGIPYGEIKEGYRANFTVIQFEDWRY--ST 342 (392)
T ss_pred HHHccCCHhhCCCCCeeHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCccCCCCccCEEEEeCCceeE--cc
Confidence 999976663 5699999999999997544 4789999999999999999999643 79999994 58886 56
Q ss_pred cCcCCcccccCCCcEEEEEEee
Q 020186 307 SFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 307 ~~s~~~~spf~~G~~l~G~v~~ 328 (329)
++|+++|||| +|++++|+|.+
T Consensus 343 ~~sk~~~sp~-~G~~l~G~v~~ 363 (392)
T PRK00369 343 KYSKVIETPL-DGFELKASVYA 363 (392)
T ss_pred ccccCCCCCC-CCCEeeeEEEE
Confidence 7999999999 99999999975
No 18
>PRK13404 dihydropyrimidinase; Provisional
Probab=100.00 E-value=7.8e-63 Score=489.67 Aligned_cols=312 Identities=17% Similarity=0.183 Sum_probs=265.4
Q ss_pred ecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCH-HHHHHHHhcCceeEEEE
Q 020186 4 ITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSP-DEIKLARKTGVVFAVKL 82 (329)
Q Consensus 4 ~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~-~el~~l~~~G~v~~~K~ 82 (329)
-++..+|++|||||+++||++.|+.++.+.++.+.+.+++.+. +||++|++++.+..... +++.++.+.|+ .+||+
T Consensus 78 ~~~s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~--vd~~~~~~~~~~~~~~~~~~v~~l~~~G~-~~iKi 154 (477)
T PRK13404 78 YTGTVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAV--IDYAFHLIVADPTEEVLTEELPALIAQGY-TSFKV 154 (477)
T ss_pred HHHHHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcE--EEEEEEEEecCCChhhHHHHHHHHHHcCC-CEEEE
Confidence 4667889999999999999988888888888888777665444 89999987632222223 57888988895 69999
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC--------------------ChhHHHHHHHHHHHH
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------------------DIFDREKVFIDTILQ 142 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~--------------------~~~~~E~~av~~~~~ 142 (329)
|+++ ++..+++ ..+++++++++++|.+|++||||.+++. .+..+|..++.+++
T Consensus 155 ~~~~----~~~~~~~--~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~~~~~~~G~~~~~~~~~~rp~~~E~~~v~~~~- 227 (477)
T PRK13404 155 FMTY----DDLKLDD--RQILDVLAVARRHGAMVMVHAENHDMIAWLTKRLLAAGLTAPKYHAISRPMLAEREATHRAI- 227 (477)
T ss_pred EecC----CCCCCCH--HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHCCCcchhhccccCCHHHHHHHHHHHH-
Confidence 9852 1233444 7899999999999999999999977531 12468999999999
Q ss_pred HHHHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCC-CCCceEEcCCCCChhhHHHHHHHH
Q 020186 143 PLIQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGG-LRPHNYCLPVLKREIHRQAVVSAV 219 (329)
Q Consensus 143 ~~la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~-~~~~~k~~PPLR~~~dr~aLw~al 219 (329)
.+|+++|+|+||+|+||++++++|+++|+ .+||||||||||+||++++.... +|+.+|||||||+++||++||++|
T Consensus 228 -~la~~~g~~~hi~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~~~~~~~~g~~~k~~Pplr~~~d~~aL~~~l 306 (477)
T PRK13404 228 -ALAELVDVPILIVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAEDLDRPGMEGAKYICSPPPRDKANQEAIWNGL 306 (477)
T ss_pred -HHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCHHHhcCccccCCceEECCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999987 78999999999999999985311 578999999999999999999999
Q ss_pred HcCCCCeEEecCCCCCCcCcc--------cccC--CcCCccchhHHHHHHHHHH-H-hcCCHHHHHHHHhhhhhhhcCC-
Q 020186 220 TSGSRKFFLGTDSAPHERGRK--------ECAC--GCAGIYNAPVALSLYAKVF-E-EMGALDKLEAFTSFNGPDFYGL- 286 (329)
Q Consensus 220 ~~G~Id~~i~SDHaPh~~~eK--------~~~~--~~~Gi~~~e~~lpll~~~~-~-~~~~l~~~v~~~s~nPAkifgl- 286 (329)
++|.|| +|+|||+||+.++| ..+| .++|++|+|+.+|++++.+ . +.++++++++++|.||||+||+
T Consensus 307 ~~G~id-~i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll~~~v~~~~ls~~~~~~~~t~~pA~~lgl~ 385 (477)
T PRK13404 307 ADGTFE-VFSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLFSEGVVKGRISLNRFVALTSTNPAKLYGLY 385 (477)
T ss_pred hCCCce-EEecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCC
Confidence 999999 99999999999888 2244 3469999999999999653 3 3689999999999999999999
Q ss_pred CC-C------cccEEEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 287 PR-N------TSKIKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 287 ~~-~------dADlvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
++ | +|||+|| +.+|+|++++++++++|||| +|++++|+|++
T Consensus 386 ~~~G~i~~G~~ADlvivd~~~~~~v~~~~~~~~~~~sp~-~g~~~~g~v~~ 435 (477)
T PRK13404 386 PRKGAIAIGADADIAIWDPDREVTITNADLHHAADYTPY-EGMRVTGWPVT 435 (477)
T ss_pred CCCceecCCCcCCEEEEcCCccEEEchHHhcccCCCCcc-cceEEeeeEEE
Confidence 54 3 7999999 68999999999999999999 99999999975
No 19
>PRK06189 allantoinase; Provisional
Probab=100.00 E-value=1.7e-62 Score=484.65 Aligned_cols=312 Identities=17% Similarity=0.174 Sum_probs=268.4
Q ss_pred eecccchhcccCccEEEECC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEE
Q 020186 3 WITILPICSVSHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVK 81 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmP-nt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K 81 (329)
|.++..+|++||+||+++|| |+.|+.++.+.+..+.+.++..+. +||.+|.++ . ..+.++|..|.+.|+ .+||
T Consensus 74 ~~~~~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~--~-~~~~~~l~~l~~~Gv-~~~k 147 (451)
T PRK06189 74 FATGSAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSA--VDFALWGGL--V-PGNLEHLRELAEAGV-IGFK 147 (451)
T ss_pred HHHHHHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCce--EeEEEEecc--c-ccCHHHHHHHHHcCC-cEEE
Confidence 34677899999999999999 788999999988888887766554 899998764 3 345789999998995 6999
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC--------------------ChhHHHHHHHHHHH
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------------------DIFDREKVFIDTIL 141 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~--------------------~~~~~E~~av~~~~ 141 (329)
+||.+. +..+....++ ..++++|++++++|.++++||||++++. .+..+|..++.+++
T Consensus 148 ~f~~~~-~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~P~~~E~~~v~~~l 225 (451)
T PRK06189 148 AFMSNS-GTDEFRSSDD-LTLYEGMKEIAALGKILALHAESDALTRHLTTQARQQGKTDVRDYLESRPVVAELEAVQRAL 225 (451)
T ss_pred EEcccc-CCCCcCcCCH-HHHHHHHHHHHhcCCeEEEECCChHHHHHHHHHHHhcCCCChhHccccCCHHHHHHHHHHHH
Confidence 998542 1122334555 8999999999999999999999987421 12467999999999
Q ss_pred HHHHHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHH
Q 020186 142 QPLIQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAV 219 (329)
Q Consensus 142 ~~~la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al 219 (329)
.+|+++|+|+||+|+||++++++|+++|+ .++|||||||||+||++++.. +++.+||+||||+++||++||++|
T Consensus 226 --~la~~~g~~~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~ph~L~l~~~~~~~--~~~~~~~~Pplr~~~~~~~L~~~l 301 (451)
T PRK06189 226 --LYAQETGCPLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLFTEEDFER--IGAVAKCAPPLRSRSQKEELWRGL 301 (451)
T ss_pred --HHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEeCHHHhhcCHhHhhC--cCCceEEeCCCCChhhHHHHHHHH
Confidence 89999999999999999999999999886 789999999999999999863 578999999999999999999999
Q ss_pred HcCCCCeEEecCCCCCCcCccc-ccC--CcCCccchhHHHHHHHHHH-H-hcCCHHHHHHHHhhhhhhhcCCCC-C----
Q 020186 220 TSGSRKFFLGTDSAPHERGRKE-CAC--GCAGIYNAPVALSLYAKVF-E-EMGALDKLEAFTSFNGPDFYGLPR-N---- 289 (329)
Q Consensus 220 ~~G~Id~~i~SDHaPh~~~eK~-~~~--~~~Gi~~~e~~lpll~~~~-~-~~~~l~~~v~~~s~nPAkifgl~~-~---- 289 (329)
.+|.|| +|+|||+||+.++|. .++ .++|++|+|+++|++++.. . +.++++++++++|.||||+||+++ |
T Consensus 302 ~~G~i~-~i~sDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~npA~~lgl~~~G~l~~ 380 (451)
T PRK06189 302 LAGEID-MISSDHSPCPPELKEGDDFFLVWGGISGGQSTLLVMLTEGYIERGIPLETIARLLATNPAKRFGLPQKGRLEV 380 (451)
T ss_pred hCCCce-EEECCCCCCCHHHcCcCCcccCCCCceeHHHHHHHHHHHHHhcCCCCHHHHHHHHhhhHHHHhCCCCCCcccC
Confidence 999999 999999999999886 344 3469999999999999643 3 468999999999999999999963 4
Q ss_pred --cccEEEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 290 --TSKIKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 290 --dADlvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+|||+|| +++|++++++++|+++|||| +|++++|+|.+
T Consensus 381 G~~ADlvi~d~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~v~~ 422 (451)
T PRK06189 381 GADADFVLVDLDETYTLTKEDLFYRHKQSPY-EGRTFPGRVVA 422 (451)
T ss_pred CCcCCEEEEcCCCCEEECHHHhhhcCCCCCc-CCcEEEeEEEE
Confidence 7999999 47999999999999999999 99999999975
No 20
>PRK09060 dihydroorotase; Validated
Probab=100.00 E-value=5.5e-62 Score=479.94 Aligned_cols=307 Identities=17% Similarity=0.199 Sum_probs=259.4
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHh-cCceeEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARK-TGVVFAVK 81 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~-~G~v~~~K 81 (329)
+-|+..+|++|||||+++|||+.|+.++.+.+..+.+++++.+. +||+++++. . ..+.+++.++.. .| +.+||
T Consensus 76 ~~t~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~--~d~~~~~~~--~-~~~~~~l~el~~~~g-v~g~k 149 (444)
T PRK09060 76 LETGSRAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMH--CDFAFYVGG--T-RDNADELAELERLPG-CAGIK 149 (444)
T ss_pred HHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccce--eeEEEEecc--C-CCCHHHHHHHHhhcC-ceEEE
Confidence 34677899999999999999999999999999888887766555 999999865 2 223456666643 36 46999
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC-----------------ChhHHHHHHHHHHHHHH
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------------DIFDREKVFIDTILQPL 144 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~-----------------~~~~~E~~av~~~~~~~ 144 (329)
+||.+. .+...+.|. ..+++++++. |.++++||||.+++. .+..+|..+++|++ .
T Consensus 150 ~fm~~~--~~~~~~~d~-~~l~~~~~~~---~~~v~~H~E~~~l~~~~~~~~~~g~~~~~~~~~p~~aE~~av~~~~--~ 221 (444)
T PRK09060 150 VFMGSS--TGDLLVEDD-EGLRRILRNG---RRRAAFHSEDEYRLRERKGLRVEGDPSSHPVWRDEEAALLATRRLV--R 221 (444)
T ss_pred EEeccC--CCCcccCCH-HHHHHHHHhC---CCeEEEECCCHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHH--H
Confidence 998532 222335565 6777777554 889999999976421 13468999999999 9
Q ss_pred HHhcCCCeEEEEecCCHHHHHHHHcccCCceEEEecchhhhcchhh-hcCCCCCCceEEcCCCCChhhHHHHHHHHHcCC
Q 020186 145 IQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNA-LFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 223 (329)
Q Consensus 145 la~~~~~~lhi~HvSt~~sl~~i~~ak~~~vt~Et~phhL~l~~~~-~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~ 223 (329)
+|+.+|+|+||+|+||++++++|+++| ..+|||||||||+|++++ +. ++++++|||||||+++||++||+++++|.
T Consensus 222 la~~~~~~lhi~h~st~~~v~~i~~~~-~~vt~ev~ph~l~l~~~~~~~--~~~~~~k~~PPlr~~~~~~~l~~al~~G~ 298 (444)
T PRK09060 222 LARETGRRIHVLHVSTAEEIDFLADHK-DVATVEVTPHHLTLAAPECYE--RLGTLAQMNPPIRDARHRDGLWRGVRQGV 298 (444)
T ss_pred HHHHHCCCEEEEeCCCHHHHHHHHHhC-CCeEEEeChHHhccCchhhcc--cCCceEEEeCCCCCHHHHHHHHHHHhCCC
Confidence 999999999999999999999999987 469999999999999988 54 36889999999999999999999999999
Q ss_pred CCeEEecCCCCCCcCcccccC--CcCCccchhHHHHHHHHHHH-hcCCHHHHHHHHhhhhhhhcCCCC-C------cccE
Q 020186 224 RKFFLGTDSAPHERGRKECAC--GCAGIYNAPVALSLYAKVFE-EMGALDKLEAFTSFNGPDFYGLPR-N------TSKI 293 (329)
Q Consensus 224 Id~~i~SDHaPh~~~eK~~~~--~~~Gi~~~e~~lpll~~~~~-~~~~l~~~v~~~s~nPAkifgl~~-~------dADl 293 (329)
|| +|+|||+||+.++|..+| .++|++|+|+++|+|++.+. ++++++++++++|.||||+||+++ | +|||
T Consensus 299 id-~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~l~~~~v~~g~l~~~~~~~~~s~~pa~~~gl~~~G~l~~G~~ADl 377 (444)
T PRK09060 299 VD-VLGSDHAPHTLEEKAKPYPASPSGMTGVQTLVPIMLDHVNAGRLSLERFVDLTSAGPARIFGIAGKGRIAVGYDADF 377 (444)
T ss_pred cc-EEecCCCCCCHHHhcCCcccCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHHhCCCCCCcccCCCcCCE
Confidence 99 999999999999997665 35699999999999997654 468999999999999999999953 4 7999
Q ss_pred EEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 294 KLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 294 vi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+|| +++|+|+.++++|+++|||| +|++++|+|++
T Consensus 378 vl~d~~~~~~v~~~~~~s~~~~sp~-~g~~l~g~~~~ 413 (444)
T PRK09060 378 TIVDLKRRETITNEWIASRCGWTPY-DGKEVTGWPVG 413 (444)
T ss_pred EEEcCCCCEEEChHHhcccCCCCCC-CCCEEeeeEEE
Confidence 999 68999999999999999999 99999999875
No 21
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=100.00 E-value=9.9e-62 Score=468.67 Aligned_cols=309 Identities=21% Similarity=0.244 Sum_probs=268.9
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCC-CCCHHHHHHHHhcCceeEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTD-TTSPDEIKLARKTGVVFAVK 81 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~-~~~~~el~~l~~~G~v~~~K 81 (329)
+.|+..+|++||||||++|||+.|+.++.+.++.+++.+++.+. +||.+|++++.+. +.++++|.+|.+.|+ ++||
T Consensus 34 ~~s~s~aA~~GGvTtii~~p~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~l~~~G~-~~~k 110 (374)
T cd01317 34 LESGAKAAAAGGFTTVVCMPNTNPVIDNPAVVELLKNRAKDVGI--VRVLPIGALTKGLKGEELTEIGELLEAGA-VGFS 110 (374)
T ss_pred HHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHHHHhccCCc--eeEEEEEEEeeCCCcccHHHHHHHHHCCc-EEEE
Confidence 45889999999999999999999999999999888888776544 7999998874332 224789999998895 6999
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC-----------------ChhHHHHHHHHHHHHHH
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------------DIFDREKVFIDTILQPL 144 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~-----------------~~~~~E~~av~~~~~~~ 144 (329)
.|. ....|+ ..++++|++++++|.++++||||.++.. .+..+|..++.+++ .
T Consensus 111 ~~~--------~~~~~~-~~l~~~~~~~~~~g~~v~~H~E~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~--~ 179 (374)
T cd01317 111 DDG--------KPIQDA-ELLRRALEYAAMLDLPIIVHPEDPSLAGGGVMNEGKVASRLGLPGIPPEAETIMVARDL--E 179 (374)
T ss_pred cCC--------cCCCCH-HHHHHHHHHHHhcCCeEEEecCChhhhhccCccCChhhHHhCCCCCCHHHHHHHHHHHH--H
Confidence 642 122344 8899999999999999999999987631 12467888999999 8
Q ss_pred HHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcC
Q 020186 145 IQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG 222 (329)
Q Consensus 145 la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G 222 (329)
+|+++|+|+||+|+|+++++++++++|+ ..+++|||||||+||++++.. +++++||+||||+++++++||+++.+|
T Consensus 180 la~~~~~~i~i~h~ss~~~l~~i~~~~~~G~~~~~e~~~h~L~ld~~~~~~--~~~~~k~~Pplr~~~~~~~l~~~~~~G 257 (374)
T cd01317 180 LAEATGARVHFQHLSTARSLELIRKAKAKGLPVTAEVTPHHLLLDDEALES--YDTNAKVNPPLRSEEDREALIEALKDG 257 (374)
T ss_pred HHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCCEEEEecHHHHhcCHHHHhc--cCCceEEcCCCCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999986 789999999999999999863 578999999999999999999999999
Q ss_pred CCCeEEecCCCCCCcCcccccC--CcCCccchhHHHHHHHHHHH-h-cCCHHHHHHHHhhhhhhhcCCCCC------ccc
Q 020186 223 SRKFFLGTDSAPHERGRKECAC--GCAGIYNAPVALSLYAKVFE-E-MGALDKLEAFTSFNGPDFYGLPRN------TSK 292 (329)
Q Consensus 223 ~Id~~i~SDHaPh~~~eK~~~~--~~~Gi~~~e~~lpll~~~~~-~-~~~l~~~v~~~s~nPAkifgl~~~------dAD 292 (329)
.|| +|+|||+||+.++|..+| +++|++|+|+.+|++++.+. . .++++++++++|.||||+||++.| +||
T Consensus 258 ~i~-~igsDh~p~~~~~k~~~~~~~~~Gi~g~e~~l~~~~~~~~~~~~~~~~~~~~~~t~npA~~lgl~~G~l~~G~~AD 336 (374)
T cd01317 258 TID-AIASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTLLVKGGLLTLPDLIRALSTNPAKILGLPPGRLEVGAPAD 336 (374)
T ss_pred Cce-EEEcCCCCCCHHHccCCHhhCCCcHhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCcccCCCcCC
Confidence 999 999999999998887664 56799999999999987553 3 569999999999999999999543 799
Q ss_pred EEEE--ecceeecCCccCcCCcccccCCCcEEEEEEeeC
Q 020186 293 IKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 329 (329)
Q Consensus 293 lvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~~ 329 (329)
|++| +++|+++.++++|+++|||| +|++++|+|++.
T Consensus 337 lvi~d~~~~~~~~~~~~~s~~~~sp~-~G~~l~g~~~~t 374 (374)
T cd01317 337 LVLFDPDAEWIVDEETFRSKSKNTPF-DGQKLKGRVLAT 374 (374)
T ss_pred EEEECCCCCEEEChhhccccCCCCCC-CCCEEeEEEEEC
Confidence 9999 68999999999999999999 999999999863
No 22
>PRK07575 dihydroorotase; Provisional
Probab=100.00 E-value=1.4e-61 Score=476.39 Aligned_cols=305 Identities=21% Similarity=0.219 Sum_probs=257.8
Q ss_pred ecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEe
Q 020186 4 ITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLY 83 (329)
Q Consensus 4 ~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f 83 (329)
-++..+|++|||||++||||+.|++++.+.+..+.+++++.+. +||++|+++ . +.+++++..+. | +.+||.|
T Consensus 77 ~~~~~aa~~gGvTt~~dmp~~~p~~~~~~~~~~~~~~a~~~~~--v~~~~~~~~--~-~~~l~~l~~~~--~-~~g~~~f 148 (438)
T PRK07575 77 FTASRACAKGGVTSFLEMPNTKPLTTTQAALDDKLARAAEKCV--VNYGFFIGA--T-PDNLPELLTAN--P-TCGIKIF 148 (438)
T ss_pred HHHHHHHHhCCEEEEEECCCCCCCCCcHHHHHHHHHHhccCcE--EEEEEEccc--c-ccCHHHHHHhh--C-CeEEEEE
Confidence 4667799999999999999999999999999888887766554 999999875 3 34566666542 4 4699999
Q ss_pred eccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC------------------ChhHHHHHHHHHHHHHHH
Q 020186 84 PAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------------------DIFDREKVFIDTILQPLI 145 (329)
Q Consensus 84 ~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~------------------~~~~~E~~av~~~~~~~l 145 (329)
+... .++..+.+. ..+++.+ ++.|.++++||||.+++. .+..+|.+++.+++ .+
T Consensus 149 ~~~~--~~~~~~~~~-~~~~~~~---~~~~~~v~~h~e~~~l~~~~~~~~~g~~~~~~~~~~~p~~aE~~av~~~~--~l 220 (438)
T PRK07575 149 MGSS--HGPLLVDEE-AALERIF---AEGTRLIAVHAEDQARIRARRAEFAGISDPADHSQIQDEEAALLATRLAL--KL 220 (438)
T ss_pred EeeC--CCCcccCcH-HHHHHHH---HhCCCEEEEeCcChHHHHhhhHhhccCcCcccccccCcHHHHHHHHHHHH--HH
Confidence 8531 122334453 4555544 456899999999987421 12468999999999 99
Q ss_pred HhcCCCeEEEEecCCHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCC
Q 020186 146 QRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK 225 (329)
Q Consensus 146 a~~~~~~lhi~HvSt~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id 225 (329)
|+++|+|+||+|+||++++++++++|..++|||||||||+||++++.. +++++|||||||+++||++||++|++|.||
T Consensus 221 a~~~g~~lhi~HiSt~~~v~~i~~~k~~~vt~ev~phhL~l~~~~~~~--~~~~~k~~PPLR~~~d~~~L~~~l~~G~id 298 (438)
T PRK07575 221 SKKYQRRLHILHLSTAIEAELLRQDKPSWVTAEVTPQHLLLNTDAYER--IGTLAQMNPPLRSPEDNEALWQALRDGVID 298 (438)
T ss_pred HHHHCCCEEEEECCCHHHHHHHHHhcCCCEEEEEchhhheeCHHHHhC--CCceEEEeCCCCCHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999875679999999999999999863 578999999999999999999999999999
Q ss_pred eEEecCCCCCCcCcccccCC--cCCccchhHHHHHHHHHHHh-cCCHHHHHHHHhhhhhhhcCCCC-C------cccEEE
Q 020186 226 FFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPR-N------TSKIKL 295 (329)
Q Consensus 226 ~~i~SDHaPh~~~eK~~~~~--~~Gi~~~e~~lpll~~~~~~-~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi 295 (329)
+|+|||+||+.++|..+|. ++|++|+|+.+|++++.+.+ +++++++++++|.||||+||+++ | +|||+|
T Consensus 299 -~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~l~~l~~~~~~~~lsl~~~~~~~s~npAk~lgl~~~G~L~~G~~ADlvi 377 (438)
T PRK07575 299 -FIATDHAPHTLEEKAQPYPNSPSGMPGVETSLPLMLTAAMRGKCTVAQVVRWMSTAVARAYGIPNKGRIAPGYDADLVL 377 (438)
T ss_pred -EEecCCCCCCHHHccCCcccCCCCcccHHHHHHHHHHHHhcCCCCHHHHHHHHhhhHHHHcCCCCCCccCCCCcCCEEE
Confidence 9999999999999987764 36999999999999976544 68999999999999999999963 4 799999
Q ss_pred E--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 296 T--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 296 ~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
| +++|+++.++++|+++|||| +|++++|+|.+
T Consensus 378 ~D~~~~~~v~~~~~~s~~~~sp~-~g~~~~G~v~~ 411 (438)
T PRK07575 378 VDLNTYRPVRREELLTKCGWSPF-EGWNLTGWPVT 411 (438)
T ss_pred EcCCCCEEEchHHccccCCCCCC-CCCEEeeEEEE
Confidence 9 58999999999999999999 99999999964
No 23
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=100.00 E-value=4.7e-61 Score=469.29 Aligned_cols=309 Identities=22% Similarity=0.294 Sum_probs=266.7
Q ss_pred ecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeC-CCCCHHHHHHHHhcCceeEEEE
Q 020186 4 ITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLT-DTTSPDEIKLARKTGVVFAVKL 82 (329)
Q Consensus 4 ~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~-~~~~~~el~~l~~~G~v~~~K~ 82 (329)
-++..+|++|||||+++|||+.|+.++.+.++.+.+.+++.+. |||.++++++.. .+..++++.+|.+.|+ ++ |+
T Consensus 60 ~~~~~~~~~~GvTtv~~~~~t~p~~~~~~~l~~~~~~~~~~~~--vd~~~~~~~~~~~~~~~l~e~~~l~~~Gv-~g-~~ 135 (411)
T TIGR00857 60 ESGSKAAAHGGFTTVADMPNTKPPIDTPETLEWKLQRLKKVSL--VDVHLYGGVTQGNQGKELTEAYELKEAGA-VG-RM 135 (411)
T ss_pred HHHHHHHHhCCeEEEEEecCCCCCCCcHHHHHHHHHHhccCCc--ccEEEEEEEecCCccccHHHHHHHHHCCc-EE-EE
Confidence 3567889999999999999999999999999888887766555 999999988532 1224778888888885 57 55
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC-----------------ChhHHHHHHHHHHHHHHH
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------------DIFDREKVFIDTILQPLI 145 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~-----------------~~~~~E~~av~~~~~~~l 145 (329)
|..+ +....+. ..++++|++++++|.++++||||+++.. .+..+|..++.+++ .+
T Consensus 136 f~~~-----~~~~~~~-~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~g~~~~~~~~~~~p~~aE~~ai~~~~--~l 207 (411)
T TIGR00857 136 FTDD-----GSEVQDI-LSMRRALEYAAIAGVPIALHAEDPDLIYGGVMHEGPSAAQLGLPARPPEAEEVAVARLL--EL 207 (411)
T ss_pred EEeC-----CcccCCH-HHHHHHHHHHHHcCCEEEEecCCHHHHhhhhhcCCcccHhhCCCCCCHHHHHHHHHHHH--HH
Confidence 5422 1122344 8999999999999999999999987531 13578999999999 89
Q ss_pred HhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCC
Q 020186 146 QRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 223 (329)
Q Consensus 146 a~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~ 223 (329)
|+++|+|+||+|+||++++++|+++|+ .+||||||||||+||++++.. +++++|||||||+++||++||++|++|.
T Consensus 208 a~~~~~~~~i~Hvs~~~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~--~~~~~k~~Pplr~~~~~~~L~~~l~~g~ 285 (411)
T TIGR00857 208 AKHAGCPVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVAR--LDGNGKVNPPLREKEDRLALIEGLKDGI 285 (411)
T ss_pred HHHHCCCEEEEeCCCHHHHHHHHHHHHcCCcEEEeechhhheecHHHHhC--CCccEEEcCCCCCHHHHHHHHHHHhcCC
Confidence 999999999999999999999999986 789999999999999999863 5789999999999999999999999999
Q ss_pred CCeEEecCCCCCCcCcccccC--CcCCccchhHHHHHHHHHHHh-cCCHHHHHHHHhhhhhhhcCCCC-C------cccE
Q 020186 224 RKFFLGTDSAPHERGRKECAC--GCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPR-N------TSKI 293 (329)
Q Consensus 224 Id~~i~SDHaPh~~~eK~~~~--~~~Gi~~~e~~lpll~~~~~~-~~~l~~~v~~~s~nPAkifgl~~-~------dADl 293 (329)
|| +|+|||+||+.++|..++ .++|++|+|+.+|++++.+++ .++++++++++|.|||++||++. | +|||
T Consensus 286 i~-~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~t~~pa~~~g~~~~G~l~~G~~ADl 364 (411)
T TIGR00857 286 ID-IIATDHAPHTLEEKTKEFAAAPPGIPGLETALPLLLQLLVKGLISLKDLIRMLSINPARIFGLPDKGTLEEGNPADI 364 (411)
T ss_pred Cc-EEEcCCCCCChHHccCCHhhCCCCceeHHHHHHHHHHHHHhCCCCHHHHHHHHhHHHHHHhCCCCCCccCCCCcCCE
Confidence 99 999999999999987655 457999999999999976654 68999999999999999999964 4 6999
Q ss_pred EEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 294 KLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 294 vi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+|| +..|+++.++++++++|||| +|++++|+|.+
T Consensus 365 vi~d~~~~~~~~~~~~~~~~~~sp~-~g~~~~g~v~~ 400 (411)
T TIGR00857 365 TVFDLKKEWTINAETFYSKAKNTPF-EGMSLKGKPIA 400 (411)
T ss_pred EEEcCCCCEEEchHHCccCCCCCCc-CCCEEEeEEEE
Confidence 999 68899999999999999999 99999999865
No 24
>PRK02382 dihydroorotase; Provisional
Probab=100.00 E-value=3.1e-60 Score=467.67 Aligned_cols=304 Identities=20% Similarity=0.248 Sum_probs=260.6
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEE-E
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAV-K 81 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~-K 81 (329)
|.++..+|++|||||+++|||+.|+.++.+.++.+.+.+++.+. +||.++++. ..+.+++.+|.+.|+ .++ |
T Consensus 74 ~~~~~~aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~--v~~~~~~~~----~~~~~~l~~l~~~gv-~~~gk 146 (443)
T PRK02382 74 WYTGSRSAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSI--VDFGINGGV----TGNWDPLESLWERGV-FALGE 146 (443)
T ss_pred HHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCce--EEEEEEeee----ccchhhHHHHHhcCc-cceeE
Confidence 45778899999999999999999999999988887777665444 899998764 234677888888885 588 9
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC------------------ChhHHHHHHHHHHHHH
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------------------DIFDREKVFIDTILQP 143 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~------------------~~~~~E~~av~~~~~~ 143 (329)
+|+.+. .++..+++ ..++++|++++++|.++++||||.++.. .+..+|..++.+++
T Consensus 147 v~~~~~--~~~~~~~~--~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~g~~~~~~~~~~~p~~~E~~av~~~~-- 220 (443)
T PRK02382 147 IFMADS--TGGMGIDE--ELFEEALAEAARLGVLATVHAEDEDLFDELAKLLKGDADADAWSAYRPAAAEAAAVERAL-- 220 (443)
T ss_pred EEEEec--CCCcccCH--HHHHHHHHHHHhcCCeEEEecCCHHHHHHhhHhhcCCCCHhhCCCcCCHHHHHHHHHHHH--
Confidence 998532 12333444 7899999999999999999999976420 12478999999999
Q ss_pred HHHhcCCCeEEEEecCCHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCC
Q 020186 144 LIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 223 (329)
Q Consensus 144 ~la~~~~~~lhi~HvSt~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~ 223 (329)
.+|+++|+|+||+|+||++++++|+++| ||||||||||+||++++. .+++++|||||||+++||++||++|++|.
T Consensus 221 ~la~~~g~~~hi~h~ss~~~~~~i~~~~---vt~ev~ph~L~l~~~~~~--~~~~~~k~~PPlr~~~d~~aL~~~l~~g~ 295 (443)
T PRK02382 221 EVASETGARIHIAHISTPEGVDAARREG---ITCEVTPHHLFLSRRDWE--RLGTFGKMNPPLRSEKRREALWERLNDGT 295 (443)
T ss_pred HHHHHhCCCEEEEECCCHHHHHHHHHCC---cEEEEchhhhhcCHHHHh--ccCceEEEcCCCCChHHHHHHHHHHhCCC
Confidence 9999999999999999999999999874 999999999999999986 35789999999999999999999999999
Q ss_pred CCeEEecCCCCCCcCcccccCC--cCCccchhHHHHHHHHHHHh-cCCHHHHHHHHhhhhhhhcCCCC-C------cccE
Q 020186 224 RKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPR-N------TSKI 293 (329)
Q Consensus 224 Id~~i~SDHaPh~~~eK~~~~~--~~Gi~~~e~~lpll~~~~~~-~~~l~~~v~~~s~nPAkifgl~~-~------dADl 293 (329)
|| +|+|||+||+.++|..++. ++|++|+|+++|++++.+++ +++++++++++|.|||++||++. | +|||
T Consensus 296 i~-~i~sDh~P~~~~~K~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~l~~~~~~~t~~pA~~~g~~~~G~l~~G~~AD~ 374 (443)
T PRK02382 296 ID-VVASDHAPHTREEKDADIWDAPSGVPGVETMLPLLLAAVRKNRLPLERVRDVTAANPARIFGLDGKGRIAEGYDADL 374 (443)
T ss_pred CC-EEEcCCCCCCHHHhcCChhhCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHcCCCCCCccCCCCcCCE
Confidence 99 9999999999999987653 46999999999999976554 78999999999999999999953 3 7999
Q ss_pred EEE--ecceeecCCccCcCCcccccCCCcEEEEEEe
Q 020186 294 KLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPS 327 (329)
Q Consensus 294 vi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~ 327 (329)
+|| +..|+++.+.++|+++|||| +|+++. +|.
T Consensus 375 vi~d~~~~~~~~~~~~~s~~~~sp~-~g~~~~-~v~ 408 (443)
T PRK02382 375 VLVDPDAAREIRGDDLHSKAGWTPF-EGMEGV-FPE 408 (443)
T ss_pred EEEcCCCcEEEcHHHhcccCCCCCc-CCCEec-eEE
Confidence 999 58999999999999999999 998765 544
No 25
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=100.00 E-value=1.2e-58 Score=456.42 Aligned_cols=311 Identities=17% Similarity=0.169 Sum_probs=265.9
Q ss_pred ecccchhcccCccEEEECC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEE
Q 020186 4 ITILPICSVSHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKL 82 (329)
Q Consensus 4 ~~~~~~Aa~GGvTtvidmP-nt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~ 82 (329)
-++..+|++|||||++||| |+.|+.++.+.++.+.+.+++.+. +||++|++. . ..+.+++.++.+.|+ .+||+
T Consensus 72 ~~~~~~~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~--~-~~~~~~i~~~~~~G~-~~ik~ 145 (443)
T TIGR03178 72 ETGTRAAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLA--VDVGFWGGL--V-PYNLDDLRELDEAGV-VGFKA 145 (443)
T ss_pred HHHHHHHHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCc--eeEEEEecc--C-CCCHHHHHHHHHCCC-cEEEE
Confidence 4567889999999999999 788999999988888777665444 899998764 2 456788999998895 59999
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC--------------------ChhHHHHHHHHHHHH
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------------------DIFDREKVFIDTILQ 142 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~--------------------~~~~~E~~av~~~~~ 142 (329)
||++. +.++....+. ..++++|+++++.|.++++|||+.++.. .+..+|..++.+++
T Consensus 146 ~~~~~-~~~~~~~~~~-~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~ae~~~~~~~~- 222 (443)
T TIGR03178 146 FLSPS-GDDEFPHVDD-WQLYKGMRELARLGQLLLVHAENPAITSALGEEAPPQGGVGADAYLASRPVFAEVEAIRRTL- 222 (443)
T ss_pred Eeccc-CCCCcccCCH-HHHHHHHHHHHhcCCeEEEeccChHHHHHHHHHHHhcCCCChhHhcCcCCHHHHHHHHHHHH-
Confidence 98642 2222233444 8899999999999999999999986421 12467899999999
Q ss_pred HHHHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHH
Q 020186 143 PLIQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVT 220 (329)
Q Consensus 143 ~~la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~ 220 (329)
.+|+++|+|+|++|+|+.+++++++++|+ .++|+|||||||+|+++++.. .++.+||+||||+++||++||++|+
T Consensus 223 -~la~~~g~~vhi~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l~l~~~~~~~--~~~~~~~~Pplr~~~~~~~l~~~l~ 299 (443)
T TIGR03178 223 -ALAKVTGCRVHVVHLSSAEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPD--GGTLAKCAPPIRDLANQEGLWEALL 299 (443)
T ss_pred -HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEECccceEecHHHhhC--cCcceEEcCCCCChHHHHHHHHHHH
Confidence 89999999999999999999999999986 789999999999999999863 5789999999999999999999999
Q ss_pred cCCCCeEEecCCCCCCcCcc-cccC--CcCCccchhHHHHHHHHHH--HhcCCHHHHHHHHhhhhhhhcCCCC-C-----
Q 020186 221 SGSRKFFLGTDSAPHERGRK-ECAC--GCAGIYNAPVALSLYAKVF--EEMGALDKLEAFTSFNGPDFYGLPR-N----- 289 (329)
Q Consensus 221 ~G~Id~~i~SDHaPh~~~eK-~~~~--~~~Gi~~~e~~lpll~~~~--~~~~~l~~~v~~~s~nPAkifgl~~-~----- 289 (329)
+|.|| +|+|||+||+.++| ..+| .++|++|+|+.+|++++.. .++++++++++++|.||||+||+++ |
T Consensus 300 ~G~i~-~i~SDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~pA~~~g~~~~G~l~~G 378 (443)
T TIGR03178 300 NGLID-CVVSDHSPCTPDLKRAGDFFKAWGGIAGLQSTLDVMFDEAVQKRGLPLEDIARLMATNPAKRFGLAQKGRIAPG 378 (443)
T ss_pred cCCcc-EEeCCCCCCChHHcCcCChhhCCCCeeEHHHhHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHcCCCCCCccCCC
Confidence 99999 99999999999998 4444 3469999999999998654 3478999999999999999999953 3
Q ss_pred -cccEEEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 290 -TSKIKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 290 -dADlvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+|||+|| +++|+++++.++|+++|||| +|++++|+|.+
T Consensus 379 ~~Ad~vi~d~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~v~~ 419 (443)
T TIGR03178 379 KDADFVFVDPDESYTLTPDDLYYRHKVSPY-VGRTIGGRVRA 419 (443)
T ss_pred CcCCEEEEcCCCcEEEcHHHhhhcCCCCCc-CCcEEeeEEEE
Confidence 7999999 47999999999999999999 99999999975
No 26
>PRK09236 dihydroorotase; Reviewed
Probab=100.00 E-value=9.7e-57 Score=442.92 Aligned_cols=307 Identities=19% Similarity=0.198 Sum_probs=261.4
Q ss_pred ecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEe
Q 020186 4 ITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLY 83 (329)
Q Consensus 4 ~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f 83 (329)
-|+..+|++||||||+||||+.|+.++.+.+..+.+.+++.+. +||++|+++ . +.+.+++.+|.+.| +.+||+|
T Consensus 75 ~~~~~aa~~~GvTtv~d~p~~~p~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~--~-~~~~~e~~~l~~~g-~~g~k~~ 148 (444)
T PRK09236 75 ASESRAAVAGGITSFMEMPNTNPPTTTLEALEAKYQIAAQRSL--ANYSFYFGA--T-NDNLDEIKRLDPKR-VCGVKVF 148 (444)
T ss_pred HHHHHHHHhCCcEEEEeCCCCCCCcCcHHHHHHHHHHhccCeE--EEEEEEecc--C-cccHHHHHHHHHcc-CcEEEEE
Confidence 3677899999999999999999999999999888887665544 899999764 2 44688899998888 4699999
Q ss_pred eccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC----------C------------hhHHHHHHHHHHH
Q 020186 84 PAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV----------D------------IFDREKVFIDTIL 141 (329)
Q Consensus 84 ~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~----------~------------~~~~E~~av~~~~ 141 (329)
+.+. .+..++.+. ..++++++ ..|.++++||||.+++. + +..+|..++.+++
T Consensus 149 ~~~~--~~~~~~~~~-~~~~~~~~---~~~~~v~~H~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~rp~~ae~~av~~~~ 222 (444)
T PRK09236 149 MGAS--TGNMLVDNP-ETLERIFR---DAPTLIATHCEDTPTIKANLAKYKEKYGDDIPAEMHPLIRSAEACYKSSSLAV 222 (444)
T ss_pred eccC--CCCcccCcH-HHHHHHHH---hcCCEEEEecCCHHHHHHHHHHHHHhcCCCCChhhccccCCHHHHHHHHHHHH
Confidence 8642 223345554 55666654 44899999999865320 1 2367888999998
Q ss_pred HHHHHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHH
Q 020186 142 QPLIQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAV 219 (329)
Q Consensus 142 ~~~la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al 219 (329)
.+|+++|+|+||+|+||++++++++++|. .++|||||||||+||++++.. +++.+|||||||++++|++||+++
T Consensus 223 --~la~~~~~~~hi~h~st~~~~~~i~~~~~~g~~vt~e~~~H~l~l~~~~~~~--~~~~~~~~Pplr~~~~~~~l~~~l 298 (444)
T PRK09236 223 --SLAKKHGTRLHVLHISTAKELSLFENGPLAEKRITAEVCVHHLWFDDSDYAR--LGNLIKCNPAIKTASDREALRQAL 298 (444)
T ss_pred --HHHHHHCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEEchhhhhcCHHHHhc--cCceEEECCCCCCHHHHHHHHHHH
Confidence 89999999999999999999999998865 789999999999999999873 588999999999999999999999
Q ss_pred HcCCCCeEEecCCCCCCcCcccccCC--cCCccchhHHHHHHHHHHH-hcCCHHHHHHHHhhhhhhhcCCC-CC------
Q 020186 220 TSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFE-EMGALDKLEAFTSFNGPDFYGLP-RN------ 289 (329)
Q Consensus 220 ~~G~Id~~i~SDHaPh~~~eK~~~~~--~~Gi~~~e~~lpll~~~~~-~~~~l~~~v~~~s~nPAkifgl~-~~------ 289 (329)
++|.|| +|+|||+||+.++|..+|. .+|++++|+++|++++.+. +.++++++++++|.||||+||++ +|
T Consensus 299 ~~G~i~-~igtDh~p~~~~~k~~~~~~~~~G~~~~e~~l~~l~~~v~~~~~~~~~~~~~~t~~pA~~lgl~~~G~l~~G~ 377 (444)
T PRK09236 299 ADDRID-VIATDHAPHTWEEKQGPYFQAPSGLPLVQHALPALLELVHEGKLSLEKVVEKTSHAPAILFDIKERGFIREGY 377 (444)
T ss_pred hCCCCc-EEECCCCCCCHHHhcCCcccCCCCcccHHHHHHHHHHHHHhcCCCHHHHHHHHHHhHHHhcCCCCCCccccCC
Confidence 999999 9999999999999987663 4699999999999987554 47899999999999999999995 34
Q ss_pred cccEEEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 290 TSKIKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 290 dADlvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+|||+|| +++|+++.++++|+++|||| +|++++|+|.+
T Consensus 378 ~ADlvi~d~~~~~~~~~~~~~s~~~~sp~-~g~~~~g~v~~ 417 (444)
T PRK09236 378 WADLVLVDLNSPWTVTKENILYKCGWSPF-EGRTFRSRVAT 417 (444)
T ss_pred cCCEEEEcCCCCEEEchHHhcccCCCCCC-CCCEEeeeEEE
Confidence 7999999 58999999999999999999 99999999975
No 27
>PLN02942 dihydropyrimidinase
Probab=100.00 E-value=4.2e-56 Score=442.72 Aligned_cols=312 Identities=15% Similarity=0.122 Sum_probs=256.3
Q ss_pred eecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHh-cCceeEEE
Q 020186 3 WITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARK-TGVVFAVK 81 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~-~G~v~~~K 81 (329)
+.||..+|++||||||+||++.. .....+.++.+.+++.+ +. +||+++++++.......+++.++.+ .| +.+||
T Consensus 79 ~~s~s~aAl~gGvTTv~D~~~~~-~~~~~~~~~~~~~~~~~-~~--~d~~~~~~~~~~~~~~~~e~~~l~~~~g-v~~~k 153 (486)
T PLN02942 79 FFSGQAAALAGGTTMHIDFVIPV-NGNLLAGYEAYEKKAEK-SC--MDYGFHMAITKWDDTVSRDMETLVKEKG-INSFK 153 (486)
T ss_pred HHHHHHHHHcCCCeEEEeCCCCC-CCCHHHHHHHHHHHHhh-cC--CCEEEEEEecCCcHhHHHHHHHHHHhCC-CceEE
Confidence 35678899999999999997433 22336777777676653 34 8999987753211122457777754 57 46899
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC--------------------ChhHHHHHHHHHHH
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------------------DIFDREKVFIDTIL 141 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~--------------------~~~~~E~~av~~~~ 141 (329)
+||++. +...+ ++ +.+++++++++++|.++++||||.++.. .+..+|..+|.+++
T Consensus 154 ~~~~~~---~~~~~-~~-~~l~~~~~~a~~~~~~v~~HaE~~~~~~~~~~~~~~~G~~~~~~~~~~rP~~~E~~av~~~~ 228 (486)
T PLN02942 154 FFMAYK---GSLMV-TD-ELLLEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATARAI 228 (486)
T ss_pred EEEecC---CCCCC-CH-HHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHcCCCChhhhhccCCchHHHHHHHHHH
Confidence 998642 22233 34 8899999999999999999999875321 13468999999998
Q ss_pred HHHHHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCC--CCCCceEEcCCCCChhhHHHHHH
Q 020186 142 QPLIQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQG--GLRPHNYCLPVLKREIHRQAVVS 217 (329)
Q Consensus 142 ~~~la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~--~~~~~~k~~PPLR~~~dr~aLw~ 217 (329)
.+++.+|+|+||+|+|+++++++|+.+|+ .+||||||||||+|+++++... .+++.+|||||||+++||++||+
T Consensus 229 --~la~~~g~~~~i~H~s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~~~~~~~~~~~~~~k~~PPlr~~~~~~~L~~ 306 (486)
T PLN02942 229 --RLAKFVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTIASKYVMSPPIRPAGHGKALQA 306 (486)
T ss_pred --HHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEECchhheeCHHHhcCcccccCcceEECCCCCCHHHHHHHHH
Confidence 89999999999999999999999999887 7999999999999999988531 15789999999999999999999
Q ss_pred HHHcCCCCeEEecCCCCCCcCcccc---cC--CcCCccchhHHHHHHHHHHH-h-cCCHHHHHHHHhhhhhhhcCC-CC-
Q 020186 218 AVTSGSRKFFLGTDSAPHERGRKEC---AC--GCAGIYNAPVALSLYAKVFE-E-MGALDKLEAFTSFNGPDFYGL-PR- 288 (329)
Q Consensus 218 al~~G~Id~~i~SDHaPh~~~eK~~---~~--~~~Gi~~~e~~lpll~~~~~-~-~~~l~~~v~~~s~nPAkifgl-~~- 288 (329)
++++|.|| +|+|||+||+.++|.. +| ..+|++|+|+.+|++++.++ . .++++++++++|.||||+||+ ++
T Consensus 307 ~l~~G~i~-~igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~i~~~~~l~~~t~~pA~~lgl~~~~ 385 (486)
T PLN02942 307 ALSSGILQ-LVGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTMVESGQISPTDYVRVTSTECAKIFNIYPRK 385 (486)
T ss_pred HhcCCceE-EEECCCCCCChHHhhcccCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999 9999999999998853 34 34699999999999986443 3 589999999999999999999 43
Q ss_pred C------cccEEEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 289 N------TSKIKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 289 ~------dADlvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
| +|||+|| +.+|+++.+.++|+++|||| +|++++|+|++
T Consensus 386 G~l~~G~~ADlv~vd~~~~~~v~~~~~~s~~~~~py-~g~~l~g~v~~ 432 (486)
T PLN02942 386 GAILAGSDADIIILNPNSTFTISAKTHHSRIDTNVY-EGRRGKGKVEV 432 (486)
T ss_pred CCcCCCCcCCEEEEcCCccEEEcHHHccccCCCCCc-cCcEeeeeEEE
Confidence 3 7999999 68999999899999999999 99999999975
No 28
>PRK09357 pyrC dihydroorotase; Validated
Probab=100.00 E-value=3e-55 Score=429.79 Aligned_cols=306 Identities=24% Similarity=0.273 Sum_probs=259.8
Q ss_pred cccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeC-CCCCHHHHHHHHhcCceeEEEEe
Q 020186 5 TILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLT-DTTSPDEIKLARKTGVVFAVKLY 83 (329)
Q Consensus 5 ~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~-~~~~~~el~~l~~~G~v~~~K~f 83 (329)
++..+|++|||||+++|||+.|+.++.+.++.+.+.+++.+. +||.+++++..+ .+.+.+++..+.+.|+ .+||.+
T Consensus 75 ~~~~~a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~gv-~~~~~~ 151 (423)
T PRK09357 75 TGSRAAAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGL--VDVLPVGAITKGLAGEELTEFGALKEAGV-VAFSDD 151 (423)
T ss_pred HHHHHHHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCc--ccEEEEEEEEeCCCCccHHHHHHHHhCCc-EEEECC
Confidence 566788999999999999999999999988887777665444 899998876422 2345778888877774 465532
Q ss_pred eccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC-----------------ChhHHHHHHHHHHHHHHHH
Q 020186 84 PAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-----------------DIFDREKVFIDTILQPLIQ 146 (329)
Q Consensus 84 ~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~-----------------~~~~~E~~av~~~~~~~la 146 (329)
+....+. +.+++++++++++|.++++|+|+..+.. .+..+|..++.+.+ .+|
T Consensus 152 --------~~~~~~~-~~l~~~~~~a~~~g~~v~iH~ee~~~~~~~~~~~g~~~~~~~~~~~p~~~E~~~i~~~~--~la 220 (423)
T PRK09357 152 --------GIPVQDA-RLMRRALEYAKALDLLIAQHCEDPSLTEGGVMNEGEVSARLGLPGIPAVAEEVMIARDV--LLA 220 (423)
T ss_pred --------CcccCCH-HHHHHHHHHHHhcCCEEEEeCCCHHHhhcccccCChhhHHhCCCCCCHHHHHHHHHHHH--HHH
Confidence 1122244 7899999999999999999999875421 12468999999998 999
Q ss_pred hcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCC
Q 020186 147 RLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSR 224 (329)
Q Consensus 147 ~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~I 224 (329)
+++|+|+||+|+|+++++++++.+|+ .+|+||||||||+||++++.. +++.+||+||||++++|++||++|++|.|
T Consensus 221 ~~~g~~~hi~H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~~~--~~~~~k~~Pplr~~~~~~~l~~~l~~G~~ 298 (423)
T PRK09357 221 EATGARVHICHVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLT--YDPNYKVNPPLRTEEDREALIEGLKDGTI 298 (423)
T ss_pred HHHCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHHhC--cCCceEECCCCCCHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999876 789999999999999999863 57899999999999999999999999999
Q ss_pred CeEEecCCCCCCcCcccccC--CcCCccchhHHHHHHHHH-HH-hcCCHHHHHHHHhhhhhhhcCCCCC------cccEE
Q 020186 225 KFFLGTDSAPHERGRKECAC--GCAGIYNAPVALSLYAKV-FE-EMGALDKLEAFTSFNGPDFYGLPRN------TSKIK 294 (329)
Q Consensus 225 d~~i~SDHaPh~~~eK~~~~--~~~Gi~~~e~~lpll~~~-~~-~~~~l~~~v~~~s~nPAkifgl~~~------dADlv 294 (329)
| +|+|||+||+.++|..+| .++|++|+|+.+|++++. +. +.++++++++++|.|||++||++.| +|||+
T Consensus 299 ~-~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~A~~~g~~~G~i~~G~~AD~~ 377 (423)
T PRK09357 299 D-AIATDHAPHAREEKECEFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLEKMTINPARILGLPAGPLAEGEPADLV 377 (423)
T ss_pred e-EEecCCCCCChHHccCCHhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCccCCCCcCCEE
Confidence 9 999999999999997655 457999999999999864 33 4689999999999999999999543 79999
Q ss_pred EE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 295 LT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 295 i~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
|+ +.+|++++++++++++|||| +|++++|+|.+
T Consensus 378 i~d~~~~~~v~~~~~~~~~~~~p~-~g~~~~g~v~~ 412 (423)
T PRK09357 378 IFDPEAEWTVDGEDFASKGKNTPF-IGMKLKGKVVY 412 (423)
T ss_pred EEcCCCCEEEchhhcccCCCCCCC-cCCEEeeEEEE
Confidence 99 57899999999999999999 99999999975
No 29
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.5e-57 Score=422.44 Aligned_cols=313 Identities=15% Similarity=0.122 Sum_probs=272.4
Q ss_pred ecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEe
Q 020186 4 ITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLY 83 (329)
Q Consensus 4 ~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f 83 (329)
-+|-.||.+||+|+||||+-..++.+..+.++.+++++..+.+ |||+||++++.+.....+||+.|.+.-.+.|||+|
T Consensus 89 ~~GTkAAlaGGtTmiID~vlp~~~~slv~afe~wr~~Ad~k~c--CDyglhv~It~W~~~v~eem~~l~~ekGvnsF~~f 166 (522)
T KOG2584|consen 89 FQGTKAALAGGTTMIIDFVLPDKGTSLVEAFEKWREWADPKVC--CDYGLHVGITWWSPSVKEEMEILVKEKGVNSFKFF 166 (522)
T ss_pred hcccHHHhcCCceEEEEEecCCCCchHHHHHHHHHhhcCCcee--eeeeeeEeeeecCcchHHHHHHHhhhcCcceEEee
Confidence 4688999999999999998666788889999999999887766 99999999987755567788888764337999999
Q ss_pred eccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC--------------------ChhHHHHHHHHHHHHH
Q 020186 84 PAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------------------DIFDREKVFIDTILQP 143 (329)
Q Consensus 84 ~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~--------------------~~~~~E~~av~~~~~~ 143 (329)
|+|. +-+++.| ..||++|+.++++|.+.+|||||.+++. ++.+-|++|+.|++
T Consensus 167 mayk---~~~~v~d--~~lye~l~~~~~lgala~vHAEngd~iae~q~~~l~~gitgPEgh~lSRPee~EaEA~~rai-- 239 (522)
T KOG2584|consen 167 MAYK---DLYMVRD--SELYEALKVCAELGALAMVHAENGDAIAEGQQRLLELGITGPEGHELSRPEELEAEATNRAI-- 239 (522)
T ss_pred eeec---cccccCH--HHHHHHHHHHhhcchhheehhhcchhhhhhhhHHHHcCCcCcccccccCchhhhHHHHHHHH--
Confidence 9873 4456777 8999999999999999999999998652 12467999999999
Q ss_pred HHHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCC--CCceEEcCCCCChh-hHHHHHHH
Q 020186 144 LIQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGL--RPHNYCLPVLKREI-HRQAVVSA 218 (329)
Q Consensus 144 ~la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~--~~~~k~~PPLR~~~-dr~aLw~a 218 (329)
.+|+..+||||++||.++.|.++|.++|+ .-++.|+.--.|.++...|..+.+ .++|+|+||||+.. +++.||++
T Consensus 240 ~ia~~~ncPlyvvhVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~~~w~~Aa~~v~sPPlr~d~~t~~~L~~l 319 (522)
T KOG2584|consen 240 TIARQANCPLYVVHVMSKSAADAIALARKKGRVVFGEPITASLGTDGSHYWSKDWDHAAAFVTSPPLRPDPTTPDGLMDL 319 (522)
T ss_pred HHHHhcCCCcceEEEeehhHHHHHHHHHhcCceeecccchhhhcccchhhccCChhhcceeeeCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999987 668999999999888776654322 46899999999977 89999999
Q ss_pred HHcCCCCeEEecCCCCCCcCccccc---C-CcC-CccchhHHHHHHHHH-H-HhcCCHHHHHHHHhhhhhhhcCC-CCC-
Q 020186 219 VTSGSRKFFLGTDSAPHERGRKECA---C-GCA-GIYNAPVALSLYAKV-F-EEMGALDKLEAFTSFNGPDFYGL-PRN- 289 (329)
Q Consensus 219 l~~G~Id~~i~SDHaPh~~~eK~~~---~-~~~-Gi~~~e~~lpll~~~-~-~~~~~l~~~v~~~s~nPAkifgl-~~~- 289 (329)
|++|+++ .++||||||+.++|... | .+| |+.|+|.+|+++|+- + .++++..|+|.++|+|.||+||| |+|
T Consensus 320 La~g~L~-~tgSdhctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~G~md~~~fVavtstnaAkifnlYprKG 398 (522)
T KOG2584|consen 320 LAEGDLQ-LTGSDHCTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKG 398 (522)
T ss_pred HhcCccc-eeecCCCCCCHHHHhhccCccccCCCccccccccceeeeehhcccCccCcccEEEEecccchhheeccCcCc
Confidence 9999999 99999999999999753 4 234 999999999999963 3 46889999999999999999999 775
Q ss_pred ------cccEEEE--ecceeecCCccCcCCcccccCCCcEEEEEEe
Q 020186 290 ------TSKIKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPS 327 (329)
Q Consensus 290 ------dADlvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~ 327 (329)
||||||| +...+|+++..|++++|+.| |||+++|.|.
T Consensus 399 rIavGsDADiVIwdp~at~tIS~~th~~~~d~Nif-EGm~~~G~pl 443 (522)
T KOG2584|consen 399 RIAVGSDADIVIWDPNATKTISAKTHHSANDFNIF-EGMTVHGVPL 443 (522)
T ss_pred eecccCCCcEEEECCCcceEeccccccccccceee-cCcEecceeE
Confidence 8999999 68999999999999999999 9999999885
No 30
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=100.00 E-value=1e-54 Score=428.76 Aligned_cols=310 Identities=17% Similarity=0.195 Sum_probs=264.0
Q ss_pred cccchhcccCccEEEECC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEe
Q 020186 5 TILPICSVSHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLY 83 (329)
Q Consensus 5 ~~~~~Aa~GGvTtvidmP-nt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f 83 (329)
++..+|++||||||++|| |+.|+.++.+.++.+.+..+..+. +||++++++ . ....+++.++.+.|+ .+||+|
T Consensus 74 ~~s~aal~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~--~-~~~~~ei~~l~~~G~-~giKv~ 147 (447)
T cd01315 74 TGTKAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLH--VDVGFWGGL--V-PGNLDQLRPLDEAGV-VGFKCF 147 (447)
T ss_pred HHHHHHHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCce--eeEEEEEee--c-CCCHHHHHHHHHcCC-cEEEEE
Confidence 667889999999999999 678899999988888777654444 899998765 3 335788999998885 599999
Q ss_pred eccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC--------------------ChhHHHHHHHHHHHHH
Q 020186 84 PAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------------------DIFDREKVFIDTILQP 143 (329)
Q Consensus 84 ~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~--------------------~~~~~E~~av~~~~~~ 143 (329)
+.... ..+....+. ..+++++++++++|.++++|+||.+++. .+..+|..++.+++
T Consensus 148 ~~~~~-~~~~~~~~~-~~l~~~~~~a~~~g~~v~vH~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~~~~~~-- 223 (447)
T cd01315 148 LCPSG-VDEFPAVDD-EQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAKGKRDYRDYLASRPVFTEVEAIQRIL-- 223 (447)
T ss_pred ecccC-CCCcccCCH-HHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHhHhhcCCCChHHhhccCCHHHHHHHHHHHH--
Confidence 86421 122223344 7899999999999999999999986421 01357889999999
Q ss_pred HHHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHc
Q 020186 144 LIQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTS 221 (329)
Q Consensus 144 ~la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~ 221 (329)
.+|+.+|+|+||+|+|+++++++++++|+ .+++||||||||.|+++++.. +++.+||+||||+++||++||++|++
T Consensus 224 ~la~~~g~~ihi~h~s~~~~~~~i~~~~~~g~~i~~e~~~h~l~~~~~~~~~--~~~~~~~~Pplr~~~~~~~l~~~l~~ 301 (447)
T cd01315 224 LLAKETGCRLHIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPD--GGTEFKCAPPIRDAANQEQLWEALEN 301 (447)
T ss_pred HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCceEEEeccccEEEcHHHccC--CCCceEECCCCCChHHHHHHHHHHhC
Confidence 89999999999999999999999999876 789999999999999999863 58899999999999999999999999
Q ss_pred CCCCeEEecCCCCCCcCccc---ccC--CcCCccchhHHHHHHHHHHH--hcCCHHHHHHHHhhhhhhhcCCC-C-C---
Q 020186 222 GSRKFFLGTDSAPHERGRKE---CAC--GCAGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYGLP-R-N--- 289 (329)
Q Consensus 222 G~Id~~i~SDHaPh~~~eK~---~~~--~~~Gi~~~e~~lpll~~~~~--~~~~l~~~v~~~s~nPAkifgl~-~-~--- 289 (329)
|.|| +|+|||+||+.++|. .++ ..+|++|+|+.+|++++.+. ++++++++++++|.|||++||++ + |
T Consensus 302 g~i~-~i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~pa~~~g~~~~~G~l~ 380 (447)
T cd01315 302 GDID-MVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVNKRGLSLEDIARLMCENPAKLFGLSHQKGRIA 380 (447)
T ss_pred Ccee-EEeCCCCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCcccc
Confidence 9999 999999999999986 333 34699999999999886543 36899999999999999999995 3 3
Q ss_pred ---cccEEEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 290 ---TSKIKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 290 ---dADlvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+|||+|+ +++|++++++++++++|+|| +|++++|+|.+
T Consensus 381 ~g~~Ad~~v~d~~~~~~~~~~~~~~~~~~~~~-~g~~~~g~v~~ 423 (447)
T cd01315 381 VGYDADFVVWDPEEEFTVDAEDLYYKNKISPY-VGRTLKGRVHA 423 (447)
T ss_pred CCCCCCEEEEcCCCCEEEcHHHccccCCCCCc-cCeEEeeeEEE
Confidence 7999999 57899999999999999999 99999999975
No 31
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=100.00 E-value=1.6e-53 Score=420.39 Aligned_cols=313 Identities=16% Similarity=0.144 Sum_probs=257.9
Q ss_pred ecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEe
Q 020186 4 ITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLY 83 (329)
Q Consensus 4 ~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f 83 (329)
-+++.+|++|||||++|||++.|+.+..+.++.+..++...+. +||+++...........+++..+.+.|+ .++|+|
T Consensus 74 ~~~~~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~l~~~g~-~~ik~~ 150 (447)
T cd01314 74 ESGTRAAAAGGTTTIIDFAIPNKGQSLLEAVEKWRGKADGKSV--IDYGFHMIITDWTDSVIEELPELVKKGI-SSFKVF 150 (447)
T ss_pred HHHHHHHHhCCCcEEEeCCCCCCCCCHHHHHHHHHHHhcCCCc--ccEEEEEeecCCChHHHHHHHHHHHcCC-CEEEEE
Confidence 3566788999999999999998877778878777665544333 8998887642112223567788877784 589999
Q ss_pred eccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC--------------------ChhHHHHHHHHHHHHH
Q 020186 84 PAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------------------DIFDREKVFIDTILQP 143 (329)
Q Consensus 84 ~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~--------------------~~~~~E~~av~~~~~~ 143 (329)
+++. .....+. +.++++++++++.|.++.+|+|+..... .+..+|..++.+++
T Consensus 151 ~~~~----~~~~~s~-~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~-- 223 (447)
T cd01314 151 MAYK----GLLMVDD-EELLDVLKRAKELGALVMVHAENGDVIAELQKKLLAQGKTGPEYHALSRPPEVEAEATARAI-- 223 (447)
T ss_pred eccC----CCCCCCH-HHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHcCCCChHHhhhcCCHHHHHHHHHHHH--
Confidence 8642 1122233 8999999999999999999999865320 12357888999988
Q ss_pred HHHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCC-CCCCceEEcCCCCChhhHHHHHHHHH
Q 020186 144 LIQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQG-GLRPHNYCLPVLKREIHRQAVVSAVT 220 (329)
Q Consensus 144 ~la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~-~~~~~~k~~PPLR~~~dr~aLw~al~ 220 (329)
.+++.+|+|+|++|+|+++++++|+.+|+ .+|+||||||||+|+++++... .+|+.+|||||||+++||++||++++
T Consensus 224 ~la~~~~~~~~~~H~s~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~~~~g~~~~~~pplr~~~~~~~l~~~l~ 303 (447)
T cd01314 224 RLAELAGAPLYIVHVSSKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKDWFEGAKYVCSPPLRPKEDQEALWDGLS 303 (447)
T ss_pred HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhccccccccceEECCCCCChHHHHHHHHHHh
Confidence 89999999999999999999999998876 7899999999999999998321 25789999999999999999999999
Q ss_pred cCCCCeEEecCCCCCCcCcccc---cC--CcCCccchhHHHHHHHHHHH--hcCCHHHHHHHHhhhhhhhcCC-CC-C--
Q 020186 221 SGSRKFFLGTDSAPHERGRKEC---AC--GCAGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYGL-PR-N-- 289 (329)
Q Consensus 221 ~G~Id~~i~SDHaPh~~~eK~~---~~--~~~Gi~~~e~~lpll~~~~~--~~~~l~~~v~~~s~nPAkifgl-~~-~-- 289 (329)
+|.|| +|+|||+||+.++|.. +| .++|++|+|+++|++|+..+ +.++++++++++|.||||+||| ++ |
T Consensus 304 ~G~i~-~igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~~~~~~~~~~~~~~~t~~pA~~~gl~~~~G~l 382 (447)
T cd01314 304 SGTLQ-TVGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRMPLLWSEGVAKGRITLEKFVELTSTNPAKIFGLYPRKGTI 382 (447)
T ss_pred CCCee-EEECCCCCCCHHHhhcccCCHhhCCCCCchHhhhHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHhCCCCCCCcc
Confidence 99999 9999999999988853 34 34699999999999996433 3689999999999999999998 44 3
Q ss_pred ----cccEEEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 290 ----TSKIKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 290 ----dADlvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+|||+|| +++|+++.++++|+++|||| +|++++|+|++
T Consensus 383 ~~G~~AD~vi~d~~~~~~~~~~~~~~~~~~~~~-~g~~~~g~v~~ 426 (447)
T cd01314 383 AVGSDADLVIWDPNAEKTISADTHHHNVDYNIF-EGMKVKGWPVV 426 (447)
T ss_pred CCCCcCCEEEEeCCcCEEecHHHhhccCCCCcc-cCeEEeeeEEE
Confidence 7999999 58999999999999999999 99999999975
No 32
>PRK08323 phenylhydantoinase; Validated
Probab=100.00 E-value=4.2e-53 Score=418.57 Aligned_cols=312 Identities=17% Similarity=0.140 Sum_probs=258.8
Q ss_pred cccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEee
Q 020186 5 TILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYP 84 (329)
Q Consensus 5 ~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f~ 84 (329)
++..+|++|||||+++||++.|+.+..+.++.+.+.+.+.+. +||+++..+.....+..+++.++.+.|+ .++|+|+
T Consensus 73 ~~~~~a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~g~-~~ik~~~ 149 (459)
T PRK08323 73 TGTRAAACGGTTTIIDFALQPKGQSLREALEAWHGKAAGKAV--IDYGFHMIITDWNEVVLDEMPELVEEGI-TSFKLFM 149 (459)
T ss_pred HHHHHHHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhccCce--EEEEEEEEecCCcHHHHHHHHHHHHcCC-CEEEEEE
Confidence 455688999999999999998888888878777665544443 8999887652122233567888888885 6899998
Q ss_pred ccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC--------------------ChhHHHHHHHHHHHHHH
Q 020186 85 AGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------------------DIFDREKVFIDTILQPL 144 (329)
Q Consensus 85 ~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~--------------------~~~~~E~~av~~~~~~~ 144 (329)
++. +....+ . +.+.++++++++.|.++.+|+|+.+.+. .+..+|..++.+++ .
T Consensus 150 ~~~---~~~~~s-~-~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~--~ 222 (459)
T PRK08323 150 AYK---GALMLD-D-DELLRALQRAAELGALPMVHAENGDAIAYLQAKLLAEGKTGPEYHALSRPPEVEGEATNRAI--M 222 (459)
T ss_pred ecC---CCCCCC-H-HHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCChhhhhccCCHHHHHHHHHHHH--H
Confidence 642 112233 3 7899999999999999999999865321 12467889999998 8
Q ss_pred HHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCC--CCCceEEcCCCCChhhHHHHHHHHH
Q 020186 145 IQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGG--LRPHNYCLPVLKREIHRQAVVSAVT 220 (329)
Q Consensus 145 la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~--~~~~~k~~PPLR~~~dr~aLw~al~ 220 (329)
+++.+|+|+||+|+|+++++++|+.+|+ .+||||||||||+|+++++.... +|..+|||||||+++|+++||++|+
T Consensus 223 ~a~~~~~~~~i~H~s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~~~~~~~~g~~~k~~pPlr~~~~~~~l~~~l~ 302 (459)
T PRK08323 223 LAELAGAPLYIVHVSCKEALEAIRRARARGQRVFGETCPQYLLLDESEYDGPDWFEGAKYVMSPPLRDKEHQDALWRGLQ 302 (459)
T ss_pred HHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEEcCccceeecHHHhcCCccccccceEECCCCCChHHHHHHHHHhh
Confidence 9999999999999999999999999887 78999999999999999986422 4788999999999999999999999
Q ss_pred cCCCCeEEecCCCCCCcCcccc----cC--CcCCccchhHHHHHHHHH-HH-hcCCHHHHHHHHhhhhhhhcCC-CC-C-
Q 020186 221 SGSRKFFLGTDSAPHERGRKEC----AC--GCAGIYNAPVALSLYAKV-FE-EMGALDKLEAFTSFNGPDFYGL-PR-N- 289 (329)
Q Consensus 221 ~G~Id~~i~SDHaPh~~~eK~~----~~--~~~Gi~~~e~~lpll~~~-~~-~~~~l~~~v~~~s~nPAkifgl-~~-~- 289 (329)
+|.|| +|+|||+||+.++|.. +| .++|++++|+.+|++++. +. +.++++++++++|.||||+||+ ++ |
T Consensus 303 ~G~i~-~i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~t~~pA~~lgl~~~~G~ 381 (459)
T PRK08323 303 DGDLQ-VVATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSEGVMTGRITLNRFVELTSTNPAKIFGLYPRKGT 381 (459)
T ss_pred cCCee-EEECCCCCCChHHhcccccCCHhhCCCCcchHhhhHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHhCCCCCCcc
Confidence 99999 9999999999888753 33 456999999999999953 33 4689999999999999999999 43 3
Q ss_pred -----cccEEEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 290 -----TSKIKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 290 -----dADlvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+|||+|| +++|+++.++++|+++|||| +|++++|+|.+
T Consensus 382 l~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~s~~-~g~~~~g~v~~ 426 (459)
T PRK08323 382 IAVGADADIVIWDPNATKTISASTLHSNVDYNPY-EGFEVTGWPVT 426 (459)
T ss_pred cCCCCcCCEEEEcCCcccccCHHHHhhcCCCCcc-cCcEEeeeEEE
Confidence 7999999 58999999999999999999 99999999865
No 33
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=100.00 E-value=5.4e-53 Score=417.00 Aligned_cols=313 Identities=19% Similarity=0.166 Sum_probs=254.0
Q ss_pred ecccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHH-HHHHHhcCceeEEEE
Q 020186 4 ITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDE-IKLARKTGVVFAVKL 82 (329)
Q Consensus 4 ~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~e-l~~l~~~G~v~~~K~ 82 (329)
-++..+|++|||||++|||++.|+.+..+.++...+.....+. +||++|...........++ +..+.+.|+ ..+|+
T Consensus 74 ~~~s~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~ik~ 150 (454)
T TIGR02033 74 FTGTKAAAAGGTTTIIDFALPHKGESLTEALETWHEKAEGKSV--IDYGFHMMITHWNDEVLEEHIPELVEEGI-TSFKV 150 (454)
T ss_pred HHHHHHHHhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhccCce--EEEEEEecccCCcHHHHHHHHHHHHhcCC-cEEEE
Confidence 3556788999999999999998887888888777666544333 7998886531111222334 555666774 58999
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC--------------------ChhHHHHHHHHHHHH
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------------------DIFDREKVFIDTILQ 142 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~--------------------~~~~~E~~av~~~~~ 142 (329)
|+++. ....+ +. +.++++++++++.|.++.+|+|+..... .+..+|..++.+.+
T Consensus 151 ~~~~~---~~~~~-~~-~~l~~~~~~a~~~~~~v~~H~E~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~~v~~~~- 224 (454)
T TIGR02033 151 FMAYK---NLLMV-DD-EELFEILKRAKELGALLQVHAENGDVIAELQARLLAQGKTGPEYHALSRPPESEAEAVARAI- 224 (454)
T ss_pred EeecC---CCCCC-CH-HHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHHHHHcCCCChhHhhhcCCHHHHHHHHHHHH-
Confidence 98541 11223 33 8899999999999999999999865310 12457888899988
Q ss_pred HHHHhcCCCeEEEEecCCHHHHHHHHcccC--CceEEEecchhhhcchhhhcCCC-CCCceEEcCCCCChhhHHHHHHHH
Q 020186 143 PLIQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAATVTPQHLVLNRNALFQGG-LRPHNYCLPVLKREIHRQAVVSAV 219 (329)
Q Consensus 143 ~~la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~Et~phhL~l~~~~~~~~~-~~~~~k~~PPLR~~~dr~aLw~al 219 (329)
.+++.+|+|+||+|+|++++++.|+.+|+ .+||||+|||||+||++++...+ +++.+|||||||+++||++||++|
T Consensus 225 -~~~~~~~~~~~i~H~s~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~~~~~~~~~~~~~pPlr~~~~~~~l~~~l 303 (454)
T TIGR02033 225 -ALAALANAPLYVVHVSTASAVDEIAEAREKGQPVYGETCPQYLLLDDTIYDKPGFEGAKYVCSPPLREKEDQDALWSAL 303 (454)
T ss_pred -HHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCchheeecHHHhcCcccccceeEECCCCCChhhHHHHHHHh
Confidence 89999999999999999999999988876 68999999999999999985321 467899999999999999999999
Q ss_pred HcCCCCeEEecCCCCCCcCccc----ccC--CcCCccchhHHHHHHHHHH-H-hcCCHHHHHHHHhhhhhhhcCC-CC-C
Q 020186 220 TSGSRKFFLGTDSAPHERGRKE----CAC--GCAGIYNAPVALSLYAKVF-E-EMGALDKLEAFTSFNGPDFYGL-PR-N 289 (329)
Q Consensus 220 ~~G~Id~~i~SDHaPh~~~eK~----~~~--~~~Gi~~~e~~lpll~~~~-~-~~~~l~~~v~~~s~nPAkifgl-~~-~ 289 (329)
.+|.|| +|+|||+||+.++|. .+| .++|++|+|+.+|++++.+ . +.++++++++++|.||||+||+ ++ |
T Consensus 304 ~~G~i~-~igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~e~~l~~l~~~~v~~~~~~~~~~~~~~t~~pa~~~gl~~~~G 382 (454)
T TIGR02033 304 SSGALQ-TVGSDHCPFNFAQKKAIGKDDFTKIPNGGPGVEERMTLLFDEGVATGRITLEKFVELTSTNPAKIFNMYPRKG 382 (454)
T ss_pred hcCCeE-EEECCCCCCCHHHhhhcccCCHhhCCCCCchHHhHHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHcCCCCCCC
Confidence 999999 999999999988883 234 3469999999999999643 3 3579999999999999999999 43 4
Q ss_pred ------cccEEEE--ecceeecCCccCcCCcccccCCCcEEEEEEee
Q 020186 290 ------TSKIKLT--KIPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 328 (329)
Q Consensus 290 ------dADlvi~--~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~~ 328 (329)
+|||+|| +.+|+++.++++|+++|||| +|++++|+|.+
T Consensus 383 ~l~~G~~AD~~i~d~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~v~~ 428 (454)
T TIGR02033 383 TIAVGSDADIVIWDPNRTTVISAETHHDNADYNPF-EGFKVQGAVVS 428 (454)
T ss_pred ccccCCcCCEEEEcCCcCeeechHHhhccCCCCcc-cCeEEeeeEEE
Confidence 7999999 58999999999999999999 99999999975
No 34
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.5e-41 Score=306.08 Aligned_cols=312 Identities=63% Similarity=1.036 Sum_probs=282.4
Q ss_pred CccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEeeccccccCCC
Q 020186 14 HYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQD 93 (329)
Q Consensus 14 GvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f~~~~~~~~~~ 93 (329)
++...+.|||..||+++.+...++++++.+..+..-+|-+.+++|++++..+++|.+..+.|++.++|+|+++.++|++.
T Consensus 33 ~f~rAiIMPNL~pPvtt~~~a~aYr~rIl~a~p~~~~F~PLMtlYLtd~~~peel~~a~~~g~i~a~KlYPaGaTTNS~~ 112 (344)
T COG0418 33 GFGRAIIMPNLVPPVTTVADALAYRERILKAVPAGHRFTPLMTLYLTDSTTPEELEEAKAKGVIRAVKLYPAGATTNSDS 112 (344)
T ss_pred hcceEEEcCCCCCCcccHHHHHHHHHHHHHhCcCCCCCceeEEEEecCCCCHHHHHHHHhcCcEEEEEeccCCccccCcC
Confidence 78889999999999999888888898888765543589999999998778899999999999889999999999999999
Q ss_pred CccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHcccCC
Q 020186 94 GVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEG 173 (329)
Q Consensus 94 ~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~sl~~i~~ak~~ 173 (329)
||+|- +.++.+|+.+++.|.++.||.|-.+...+++.+|...+.+++...-.+.+..++.+.|+||+++++.|+++. .
T Consensus 113 GV~~~-~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdrE~~Fi~~vl~pl~~~fP~LKIV~EHiTT~dav~~v~~~~-~ 190 (344)
T COG0418 113 GVTDI-EKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDREAAFIESVLEPLRQRFPKLKIVLEHITTKDAVEYVKDAN-N 190 (344)
T ss_pred CcCcH-HHHHHHHHHHHHcCCeEEEecccCCccccchhhHHHHHHHHHHHHHhhCCcceEEEEEeccHHHHHHHHhcC-c
Confidence 99997 999999999999999999999977665677889999888888666678899999999999999999999875 5
Q ss_pred ceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchh
Q 020186 174 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAP 253 (329)
Q Consensus 174 ~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e 253 (329)
++.+.+|||||++|.+++..++..+.+.|.|=++.++||+||.++..+|.--|++|||.|||....|+...|++|+-+..
T Consensus 191 nlaATIT~hHL~~nrnd~l~Ggi~Ph~fClPilKr~~hr~AL~~aa~sg~~kfFlGtDSAPH~~~~Ke~~cgcAG~fsap 270 (344)
T COG0418 191 NLAATITPHHLLLNRNDMLVGGIRPHLFCLPILKRETHREALREAATSGHPKFFLGTDSAPHARSRKESACGCAGIFSAP 270 (344)
T ss_pred ceeeEeehhheeeehhhhhcCCCCcceeeeccccchhhHHHHHHHHhcCCCcEEecCCCCCCcccccccccccccccccH
Confidence 69999999999999999876666799999999999999999999999999999999999999999999888999999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHhhhhhhhcCCCCCcccEEEEecceeecCCccCcCCcccccCCCcEEEEEEe
Q 020186 254 VALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEWQPS 327 (329)
Q Consensus 254 ~~lpll~~~~~~~~~l~~~v~~~s~nPAkifgl~~~dADlvi~~~~~~v~~~~~~s~~~~spf~~G~~l~G~v~ 327 (329)
..+|++.+++++...|+.|-...|.|..+++|||..+.-+++++++|.|....-.....-.||..|.+|+|.+.
T Consensus 271 ~al~~~AevFE~~naL~~LeaF~S~nGp~fY~lp~n~~~itL~k~~~~vP~~i~~g~~~vvpf~aGe~L~W~v~ 344 (344)
T COG0418 271 FALPLYAEVFEEENALDNLEAFASDNGPKFYGLPRNDKTITLVKEEWQVPESIPFGDDIVVPFRAGETLSWSVK 344 (344)
T ss_pred hHHHHHHHHHHHhcHHHHHHHHHhhcCcceecccCCCceEEEEeccccccceeccCCCceEEecCCCeeeeeeC
Confidence 99999999999999999999999999999999997666788889999998776666667889999999999863
No 35
>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.3e-35 Score=259.75 Aligned_cols=313 Identities=66% Similarity=1.056 Sum_probs=271.5
Q ss_pred chhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEeeccc
Q 020186 8 PICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGA 87 (329)
Q Consensus 8 ~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f~~~~ 87 (329)
+--+.|||...+.|||.+||+++.+..-.+++.+.+... .-.|.+++|+++...+++|.+..+.|++.++|+|+++.
T Consensus 28 P~~a~ggvs~AyvMPNL~PPiTt~da~i~YkK~i~kL~s---kttfLMslYLs~~ttPe~I~eAa~~~~irgVK~YPaGa 104 (344)
T KOG2902|consen 28 PHSASGGVSRAYVMPNLKPPITTTDAAIIYKKFIMKLPS---KTTFLMSLYLSDKTTPEEIREAAESGVIRGVKLYPAGA 104 (344)
T ss_pred cccccCceeEEEEcCCCCCCcchHHHHHHHHHHHHhcCc---cceeEEEEeecCCCCHHHHHHHHHhCceeeEEeccCcc
Confidence 456789999999999999999998877667776666332 33557788878777899999999999999999999999
Q ss_pred cccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCC-hhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHHHHHH
Q 020186 88 TTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD-IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKF 166 (329)
Q Consensus 88 ~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~-~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~sl~~ 166 (329)
++|+..+++++++..|.+|+.+.+.|.++.+|.|-+..+.+ .+.+|...+-.++. ...+..+.++.+.|++|..+++.
T Consensus 105 TTNS~~GV~~~f~~fyPvf~aMqe~nm~LnvHGEvpps~D~~Vf~aE~~Flptll~-LhqrfP~LKivlEHcTt~dAv~~ 183 (344)
T KOG2902|consen 105 TTNSQDGVTDLFGKFYPVFEAMQEQNMPLNVHGEVPPSIDGHVFDAEKIFLPTLLQ-LHQRFPQLKIVLEHCTTMDAVNF 183 (344)
T ss_pred cccccccccccchhhhHHHHHHHHcCceEEecCCCCCccCCceecchhhhHHHHHH-HHHhCccceeHHHhcccHHHHHH
Confidence 99999999886689999999999999999999997654322 45788887777764 56789999999999999999999
Q ss_pred HHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCc
Q 020186 167 VESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGC 246 (329)
Q Consensus 167 i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~ 246 (329)
++.|+...|-+.+++|||+|+.++|. + ++...|.|-++.+.||+||.+|..+|.--|+.|||.|||.+..|+...+.
T Consensus 184 ve~a~~~sVaaTvTahHL~Lt~~dwq--g-~P~nfCkPVaK~e~dr~AlvkAatSg~pkFFfGsDSAPHprs~K~~~~~c 260 (344)
T KOG2902|consen 184 VESAKEGSVAATVTAHHLLLTRNDWQ--G-QPHNFCKPVAKREIDREALVKAATSGSPKFFFGSDSAPHPRSRKESSCGC 260 (344)
T ss_pred HHhhcCCceeeEeehheeEEehhhhc--C-CCcccccccccCcccHHHHHHHHhcCCCceeecCCCCCCcccccccCCCc
Confidence 99998788899999999999999986 3 68899999999999999999999999999899999999999999877788
Q ss_pred CCccchhHHHHHHHHHHHhcCCHHHHHHHHhhhhhhhcCCC--CCcccEEEEecceeecCCccCcCCcccccCCCcEEEE
Q 020186 247 AGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP--RNTSKIKLTKIPWKVPEAFSFSFGDIIPMFAGNTLEW 324 (329)
Q Consensus 247 ~Gi~~~e~~lpll~~~~~~~~~l~~~v~~~s~nPAkifgl~--~~dADlvi~~~~~~v~~~~~~s~~~~spf~~G~~l~G 324 (329)
+|+-+....+|++.+++.+.+.|+.+-..+|.+.-+++|+| ++.-||++=++.|.|.+-....++..-||+.|.+|+|
T Consensus 261 AGvysqpfA~sy~A~VFde~gaLd~Lk~F~s~fG~~FY~~p~e~~sS~I~lKKe~~~vP~v~~~~~~~ivPf~age~LqW 340 (344)
T KOG2902|consen 261 AGVYSQPFALSYYAKVFDEAGALDKLKAFTSFFGPDFYGLPDERNSSKITLKKEPWKVPDVFNFPFGEIVPFFAGETLQW 340 (344)
T ss_pred ceeecccchHHHHHHHHhhhchHHHHhhhHhhcCcceecccccccccceeeecCcccCcchhcCCCCceeeecCCCeeee
Confidence 99999999999998999999999999999999999999997 3446766558999998766667778889999999999
Q ss_pred EEe
Q 020186 325 QPS 327 (329)
Q Consensus 325 ~v~ 327 (329)
.+.
T Consensus 341 ~~~ 343 (344)
T KOG2902|consen 341 QPL 343 (344)
T ss_pred eeC
Confidence 874
No 36
>PRK09061 D-glutamate deacylase; Validated
Probab=100.00 E-value=1.7e-36 Score=303.03 Aligned_cols=287 Identities=11% Similarity=0.044 Sum_probs=216.5
Q ss_pred cchhcccCccEEEEC-CCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE-----e-C-------------------
Q 020186 7 LPICSVSHYGRAIVM-PNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY-----L-T------------------- 60 (329)
Q Consensus 7 ~~~Aa~GGvTtvidm-Pnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~-----~-~------------------- 60 (329)
..+++.|||||+++| +++.|. . +.+.+..++... +||+++++.+ + +
T Consensus 86 ~~~~~~~GvTtvv~~~~~~~p~---~---~~~~~~~~~~~~--vn~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~ 157 (509)
T PRK09061 86 YRMQAFDGVTTALELEAGVLPV---A---RWYAEQAGEGRP--LNYGASVGWTPARIAVLTGPQAEGTIADFGKALGDPR 157 (509)
T ss_pred chhhccCCceeEEeeccCCCCH---H---HHHHHHHhcCCc--ceeehhcCcHHHHHHHhCCcccccccccccccccccc
Confidence 567889999999999 454543 1 222222222222 8999887763 0 1
Q ss_pred -C-----CCCHHHHHHHHh----cCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChh
Q 020186 61 -D-----TTSPDEIKLARK----TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIF 130 (329)
Q Consensus 61 -~-----~~~~~el~~l~~----~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~ 130 (329)
. +++++++.++.+ .|+ .+||.++.|. . .. +. +.|++++++++++|.++.+|+|+.+... .
T Consensus 158 ~~~~~~t~~el~~m~~ll~~al~~Ga-~gis~~~~y~--p---~~-~~-~eL~~l~~~A~~~g~~v~~H~e~~~~~~--~ 227 (509)
T PRK09061 158 WQERAATPAELAEILELLEQGLDEGA-LGIGIGAGYA--P---GT-GH-KEYLELARLAARAGVPTYTHVRYLSNVD--P 227 (509)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHCCC-CEEecCCccC--C---CC-CH-HHHHHHHHHHHHcCCEEEEEecCcccCC--c
Confidence 0 012334555554 785 5998876431 1 12 44 7899999999999999999999976421 2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEEecCC------HHHHHHHHcccC--CceEEEecchh--------hhcchhhhcCC
Q 020186 131 DREKVFIDTILQPLIQRLPQLKVVMEHITT------MDAVKFVESCKE--GFVAATVTPQH--------LVLNRNALFQG 194 (329)
Q Consensus 131 ~~E~~av~~~~~~~la~~~~~~lhi~HvSt------~~sl~~i~~ak~--~~vt~Et~phh--------L~l~~~~~~~~ 194 (329)
..|.+++.+++ .+++.+|+|+||+|+|+ ++++++|+++|+ .+||||+|||| |+|+++...
T Consensus 228 ~~e~~av~~~i--~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~Ar~~Gi~Vt~e~~P~~~~~t~~~~~~l~~~~~~-- 303 (509)
T PRK09061 228 RSSVDAYQELI--AAAAETGAHMHICHVNSTSLRDIDRCLALVEKAQAQGLDVTTEAYPYGAGSTVVGAAFFDPGWLE-- 303 (509)
T ss_pred hhHHHHHHHHH--HHHHHhCCCEEEEeeccCCcccHHHHHHHHHHHHHcCCcEEEEecCcchhhhhhcccccCHHHHH--
Confidence 46788999999 89999999999999999 999999999987 89999999999 999776665
Q ss_pred CCCCce---EE---cCCCCC-------------------------hhhHHHHHHHHHcCCCCeEEecCCCCCCcCccccc
Q 020186 195 GLRPHN---YC---LPVLKR-------------------------EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECA 243 (329)
Q Consensus 195 ~~~~~~---k~---~PPLR~-------------------------~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~ 243 (329)
.++..+ ++ +||||+ +.|+++||+++++|.| +|+|||+||+.++|..+
T Consensus 304 ~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~p~~--~i~sD~~p~~~~~~~~~ 381 (509)
T PRK09061 304 RMGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSVLFPGA--AIASDAMPWTWSDGTVY 381 (509)
T ss_pred HhCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHhCCCCc--eEecCCccccccccccc
Confidence 245556 88 999999 7789999999999998 89999999999999766
Q ss_pred CCc--CCccchh------HHHHHHHHHH-Hh--cCCHHHHHHHHhhhhhhhcC-----CC-CC------cccEEEEecce
Q 020186 244 CGC--AGIYNAP------VALSLYAKVF-EE--MGALDKLEAFTSFNGPDFYG-----LP-RN------TSKIKLTKIPW 300 (329)
Q Consensus 244 ~~~--~Gi~~~e------~~lpll~~~~-~~--~~~l~~~v~~~s~nPAkifg-----l~-~~------dADlvi~~~~~ 300 (329)
|.. +|+.+.+ ..+|.+++.+ .. .++++++++++|.||||+|| ++ +| +|||+|||...
T Consensus 382 ~~~~~~~~~~~~~h~r~~~~~~~~l~~~v~~~~~isl~~ai~~~T~~pA~~lg~~~~~l~~~G~i~~G~~ADlvv~D~~~ 461 (509)
T PRK09061 382 EGDAWPLPEDAVSHPRSAGTFARFLREYVRERKALSLLEAIRKCTLMPAQILEDSVPAMRRKGRLQAGADADIVVFDPET 461 (509)
T ss_pred cccccccccCCCCCchhhcchHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhccccccccCCEeeCCCCCcCEEEEchhh
Confidence 533 4766666 7888887644 33 37999999999999999999 75 34 79999996443
Q ss_pred eecCCccCcCCcccccCCCc
Q 020186 301 KVPEAFSFSFGDIIPMFAGN 320 (329)
Q Consensus 301 ~v~~~~~~s~~~~spf~~G~ 320 (329)
..+.+.+++. ++|| +|.
T Consensus 462 ~~~~~~~~~~--~~~~-~gi 478 (509)
T PRK09061 462 ITDRATFEDP--NRPS-EGV 478 (509)
T ss_pred cccccccccc--CCCC-CCc
Confidence 4444555443 6788 774
No 37
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=100.00 E-value=2.8e-33 Score=273.92 Aligned_cols=241 Identities=15% Similarity=0.088 Sum_probs=182.2
Q ss_pred ecccchhcccCccEEEECCC-CCCCCCcH------------------------HHHHHHHHHHHhhC-CCCccEE---EE
Q 020186 4 ITILPICSVSHYGRAIVMPN-LKPPITTT------------------------AAAVAYRESILKAL-PASSNFT---PL 54 (329)
Q Consensus 4 ~~~~~~Aa~GGvTtvidmPn-t~p~~~~~------------------------~~l~~~~~~~~~~~-~~~vd~~---~~ 54 (329)
-++..+|++|||||+++||+ +.|+.++. +.++.+.+.+++.. . +||. +|
T Consensus 69 ~~~~~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h 146 (415)
T cd01297 69 DPDLRPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWGWATFAEYLDALEARPPA--VNVAALVGH 146 (415)
T ss_pred CcchhhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCCCCCHHHHHHHHHhcCCC--cCeeeccCc
Confidence 35678899999999999998 66766655 55566777765442 3 8999 77
Q ss_pred EEEEeC---------CCCCHHHHHHHH----hcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecC
Q 020186 55 MTLYLT---------DTTSPDEIKLAR----KTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGE 121 (329)
Q Consensus 55 ~~~~~~---------~~~~~~el~~l~----~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaE 121 (329)
+++... ++.++++|.+|. +.|+ .+||.|+.|. .+... +. ..|+++|+.+++.|.++.+|||
T Consensus 147 ~~l~~~~~g~~~~~~~~~~~~~~~~l~~~al~~Ga-~g~~~~~~y~---~~~~~-~~-~~l~~~~~~a~~~g~~v~~H~e 220 (415)
T cd01297 147 AALRRAVMGLDAREATEEELAKMRELLREALEAGA-LGISTGLAYA---PRLYA-GT-AELVALARVAARYGGVYQTHVR 220 (415)
T ss_pred HHHHHHHhCcCCCCCCHHHHHHHHHHHHHHHHCCC-eEEEcccccC---CcccC-CH-HHHHHHHHHHHHcCCEEEEEEC
Confidence 765310 012355666664 5685 6999988652 11123 34 8999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHHH---------HHHHHcccC--CceEEEecchhhhcchhh
Q 020186 122 VTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA---------VKFVESCKE--GFVAATVTPQHLVLNRNA 190 (329)
Q Consensus 122 d~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~s---------l~~i~~ak~--~~vt~Et~phhL~l~~~~ 190 (329)
+.+ .+|..++.+++ .+++.+|+|+||+|+|+.++ +++|+++|+ .+|++|||||||.+
T Consensus 221 ~~~------~~e~~av~~~~--~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~i~~a~~~G~~v~~e~~p~~~~~---- 288 (415)
T cd01297 221 YEG------DSILEALDELL--RLGRETGRPVHISHLKSAGAPNWGKIDRLLALIEAARAEGLQVTADVYPYGAGS---- 288 (415)
T ss_pred ccc------ccHHHHHHHHH--HHHHHhCCCEEEEEEecCCCcccchHHHHHHHHHHHHHhCCcEEEEeCCCCCCc----
Confidence 875 36888999999 89999999999999999999 999999987 79999999998876
Q ss_pred hcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHHH-HH-h-cC
Q 020186 191 LFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKV-FE-E-MG 267 (329)
Q Consensus 191 ~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~-~~-~-~~ 267 (329)
.+ .|+.+.++.++ +|+|||+|+. |. .+...+. +|+++.. +. + .+
T Consensus 289 ------------------~~----~~~~l~~~~~~-~i~SDh~~~~---~~----~~~~~~~---~~~~l~~~~~~~~~~ 335 (415)
T cd01297 289 ------------------ED----DVRRIMAHPVV-MGGSDGGALG---KP----HPRSYGD---FTRVLGHYVRERKLL 335 (415)
T ss_pred ------------------HH----HHHHHHcCCCc-eeeeCCCcCC---CC----CcchhCC---HHHHHHHHhcccCCC
Confidence 23 34444445899 9999999985 21 1122221 6777643 32 3 48
Q ss_pred CHHHHHHHHhhhhhhhcCCC-CC------cccEEEEe
Q 020186 268 ALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTK 297 (329)
Q Consensus 268 ~l~~~v~~~s~nPAkifgl~-~~------dADlvi~~ 297 (329)
+++++++++|.||||+||++ +| +|||+|||
T Consensus 336 ~~~~~~~~~t~~pA~~~gl~~~G~l~~G~~ADlvv~d 372 (415)
T cd01297 336 SLEEAVRKMTGLPARVFGLADRGRIAPGYRADIVVFD 372 (415)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEEc
Confidence 99999999999999999996 44 79999995
No 38
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=99.94 E-value=3.4e-26 Score=221.01 Aligned_cols=251 Identities=11% Similarity=0.006 Sum_probs=176.6
Q ss_pred ecccchhcccCccEEEECC-CC--CCCCCcHHHHHHHH---HHHHhh--CCCCccEEEEEEEEeCCCCCHHHHHHHHhcC
Q 020186 4 ITILPICSVSHYGRAIVMP-NL--KPPITTTAAAVAYR---ESILKA--LPASSNFTPLMTLYLTDTTSPDEIKLARKTG 75 (329)
Q Consensus 4 ~~~~~~Aa~GGvTtvidmP-nt--~p~~~~~~~l~~~~---~~~~~~--~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G 75 (329)
.++-.+|++|||||+++|| |. .|+..+.+.++.+. +.++++ +. |||.||+.+.....++.++|..+.+.|
T Consensus 77 ~~~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~h~~~e~~~~~~~~~l~~~~~~g 154 (376)
T TIGR02318 77 VEHDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDRGLLR--ADHRLHLRCELPNEEVLPELEELIDDP 154 (376)
T ss_pred HHHHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhcCchh--hhceeEEEEEecCccHHHHHHHHhcCC
Confidence 4566789999999999999 44 57778889888888 444433 33 899999997433456688999999999
Q ss_pred ceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhH----HHHHHHHHHHHHHHHhcCCC
Q 020186 76 VVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFD----REKVFIDTILQPLIQRLPQL 151 (329)
Q Consensus 76 ~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~----~E~~av~~~~~~~la~~~~~ 151 (329)
+ .+||.||... .+..+..|. ..+++.++. +.| ++|||+.++...... .-.+++.+++ .+|+.+|+
T Consensus 155 ~-~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~--~~g---~~~~e~~~~~~~~~~~~~~~~~e~i~~~v--~~A~~~G~ 223 (376)
T TIGR02318 155 R-VDLISLMDHT--PGQRQFRDL-EKYREYYRG--KRG---LSDDEFDEIVEERIARRAEYGLANRSEIA--ALARARGI 223 (376)
T ss_pred C-cCEEEEeCCC--CCcccccCH-HHHHHHHHh--hcC---CCHHHHHHHHHHHHHHHhhccHHHHHHHH--HHHHHCCC
Confidence 5 5999999653 233444454 666766644 556 779998764311100 0135677777 79999999
Q ss_pred eEEEEec-CCHHHHHHHHcccCC-----ceEEEecchhhhcchhhhcCCCCCCc-eEEcC-CCCChhh--HHHHHHHHHc
Q 020186 152 KVVMEHI-TTMDAVKFVESCKEG-----FVAATVTPQHLVLNRNALFQGGLRPH-NYCLP-VLKREIH--RQAVVSAVTS 221 (329)
Q Consensus 152 ~lhi~Hv-St~~sl~~i~~ak~~-----~vt~Et~phhL~l~~~~~~~~~~~~~-~k~~P-PLR~~~d--r~aLw~al~~ 221 (329)
|+ ..|. .+.+.++..++.. . +++.|+ .++... .|.+ .++.| |+|...+ +..+|+++.+
T Consensus 224 ~v-~sH~~~~~e~i~~a~~~G-v~~~E~~~t~e~--------a~~~~~--~G~~v~~~~p~~~r~~~~~~~~~l~~~~~~ 291 (376)
T TIGR02318 224 PL-ASHDDDTPEHVAEAHDLG-VTISEFPTTLEA--------AKEARS--LGMQILMGAPNIVRGGSHSGNLSARELAHE 291 (376)
T ss_pred eE-EEecCCCHHHHHHHHHCC-CChhccCCCHHH--------HHHHHH--cCCeEEECCccccccccccchHHHHHHHHC
Confidence 98 7788 4666554444332 2 333333 122221 2555 77778 8999877 8899999999
Q ss_pred CCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHHHHH--hcCCHHHHHHHHhhhhhhhcCCCC-C------ccc
Q 020186 222 GSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYGLPR-N------TSK 292 (329)
Q Consensus 222 G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~~--~~~~l~~~v~~~s~nPAkifgl~~-~------dAD 292 (329)
|.+| +++|||.|++ .++.++.... ..++++++++++|.|||+++|++. | +||
T Consensus 292 G~~~-~l~SD~~p~~------------------~l~~~~~~~~~~~gl~~~~al~~~T~npA~~lgl~~~G~I~~G~~AD 352 (376)
T TIGR02318 292 GLLD-VLASDYVPAS------------------LLLAAFQLADDVEGIPLPQAVKMVTKNPARAVGLSDRGSIAPGKRAD 352 (376)
T ss_pred CCcE-EEEcCCCcHH------------------HHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHcCCCCCCcCCCCCccc
Confidence 9999 9999998842 3444444332 257999999999999999999953 3 799
Q ss_pred EEEEec
Q 020186 293 IKLTKI 298 (329)
Q Consensus 293 lvi~~~ 298 (329)
|++++.
T Consensus 353 lvvvd~ 358 (376)
T TIGR02318 353 LVRVHR 358 (376)
T ss_pred EEEEcC
Confidence 999954
No 39
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=99.93 E-value=1.8e-25 Score=216.55 Aligned_cols=255 Identities=12% Similarity=-0.005 Sum_probs=167.6
Q ss_pred eecccchhcccCccEEEECC-CCC-CC-C----CcHHHHHHHHH--HHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHh
Q 020186 3 WITILPICSVSHYGRAIVMP-NLK-PP-I----TTTAAAVAYRE--SILKALPASSNFTPLMTLYLTDTTSPDEIKLARK 73 (329)
Q Consensus 3 ~~~~~~~Aa~GGvTtvidmP-nt~-p~-~----~~~~~l~~~~~--~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~ 73 (329)
|.++-.+|++||+||++||+ ++. |+ . +..+.+..+.+ +.+..+. |||+||+.+.....+..++|.++.+
T Consensus 80 ~~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--vD~~~h~~~~~~~~~~~~~l~~~~~ 157 (383)
T PRK15446 80 LAAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARARGLLR--ADHRLHLRCELTNPDALELFEALLA 157 (383)
T ss_pred HHHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhcCchh--ccceeEEEEEecCcchHHHHHHHhc
Confidence 34577899999999999985 443 42 2 22223444554 3333333 8999999985434556889999999
Q ss_pred cCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCC----hhHHHHHHHHHHHHHHHHhcC
Q 020186 74 TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD----IFDREKVFIDTILQPLIQRLP 149 (329)
Q Consensus 74 ~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~----~~~~E~~av~~~~~~~la~~~ 149 (329)
.|+ ++||.||......++ +.+. .. ++.+. .++.| ++|||+.++... +...|.+++++++ .+|+.+
T Consensus 158 ~g~-~~~k~fm~~~p~~~~--~~~~-~~-~~~~~-~~~~g---~~~~e~~~~~~~~~~~~~~~~~e~i~~~v--~~A~~~ 226 (383)
T PRK15446 158 HPR-VDLVSLMDHTPGQRQ--FRDL-EK-YREYY-AGKYG---LSDEEFDAFVEERIALSARYAPPNRRAIA--ALARAR 226 (383)
T ss_pred CCC-cCEEEEeCCCCcccc--ccCH-HH-HHHHH-HhhcC---CCHHHHHHHHHHHHHhHhhcCHHHHHHHH--HHHHHC
Confidence 995 699999964211122 2232 23 44555 56777 679999865321 1233567788888 899999
Q ss_pred CCeEEEEec-CCHHHHHHHHcccCCceEEEecchhhhcchhh---hcCCCCCCc-eEEcC-CCCC--hhhHHHHHHHHHc
Q 020186 150 QLKVVMEHI-TTMDAVKFVESCKEGFVAATVTPQHLVLNRNA---LFQGGLRPH-NYCLP-VLKR--EIHRQAVVSAVTS 221 (329)
Q Consensus 150 ~~~lhi~Hv-St~~sl~~i~~ak~~~vt~Et~phhL~l~~~~---~~~~~~~~~-~k~~P-PLR~--~~dr~aLw~al~~ 221 (329)
|+++ ..|. .+.+.++..+++. +.++ | |. .+.+. ..+ .|.. .++.| |+|. ...+..+|+++..
T Consensus 227 g~~v-~sH~~~~~~~i~~a~~~G-v~~~-e---~~--~~~e~~~~~~~--~g~~v~~~~p~~~r~~~~~~~~~~~~~~~~ 296 (383)
T PRK15446 227 GIPL-ASHDDDTPEHVAEAHALG-VAIA-E---FP--TTLEAARAARA--LGMSVLMGAPNVVRGGSHSGNVSALDLAAA 296 (383)
T ss_pred CCce-eecCCCCHHHHHHHHHcC-Ccee-e---CC--CcHHHHHHHHH--CCCEEEeCCcccccCCcccchHhHHHHHHC
Confidence 9998 7788 5776655544332 4333 3 11 12222 111 1333 33445 5787 6678999999999
Q ss_pred CCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHHHHH-hcCCHHHHHHHHhhhhhhhcCCCC-C------cccE
Q 020186 222 GSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE-EMGALDKLEAFTSFNGPDFYGLPR-N------TSKI 293 (329)
Q Consensus 222 G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~~-~~~~l~~~v~~~s~nPAkifgl~~-~------dADl 293 (329)
|.++ +++|||.|++ .++.++.... ..+++++++++.|.|||+++|++. | +|||
T Consensus 297 Gv~~-~lgSD~~p~~------------------~~~~~~~~~~~~gls~~~al~~~T~npA~~lgl~~~G~I~~G~~ADl 357 (383)
T PRK15446 297 GLLD-ILSSDYYPAS------------------LLDAAFRLADDGGLDLPQAVALVTANPARAAGLDDRGEIAPGKRADL 357 (383)
T ss_pred CCcE-EEEcCCChhh------------------HHHHHHHHHHhcCCCHHHHHHHHhHHHHHHcCCCCCcCcCCCCcCCE
Confidence 9999 9999998753 2333333333 368999999999999999999943 3 7999
Q ss_pred EEEecc
Q 020186 294 KLTKIP 299 (329)
Q Consensus 294 vi~~~~ 299 (329)
+|+|..
T Consensus 358 vv~d~~ 363 (383)
T PRK15446 358 VRVRRA 363 (383)
T ss_pred EEEcCC
Confidence 999543
No 40
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=99.77 E-value=2.6e-17 Score=159.67 Aligned_cols=168 Identities=13% Similarity=0.047 Sum_probs=111.7
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCeEEEEecC---CHHHHHHHHcccC---CceEEEecchhhhcchhhhcC----CCCCC-
Q 020186 130 FDREKVFIDTILQPLIQRLPQLKVVMEHIT---TMDAVKFVESCKE---GFVAATVTPQHLVLNRNALFQ----GGLRP- 198 (329)
Q Consensus 130 ~~~E~~av~~~~~~~la~~~~~~lhi~HvS---t~~sl~~i~~ak~---~~vt~Et~phhL~l~~~~~~~----~~~~~- 198 (329)
...|..++.+.+ .+++..+++.|+.|+. +..+++.+.++++ .+++ |+||||+.++.++++. ...|.
T Consensus 167 ~~~~~~~~~~~a--~~~~~~~~~~~~~~vh~~~~~~~~~~i~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~ 243 (387)
T cd01308 167 TVEELARIAAEA--RVGGLLGGKAGIVHIHLGDGKRALSPIFELIEETEIPIT-QFLPTHINRTAPLFEQGVEFAKMGGT 243 (387)
T ss_pred CHHHHHHHHHHH--HHHHHhcCCCcEEEEEeCCchHHHHHHHHHHHhcCCCcc-eeECCcccCCHHHHHHHHHHHHcCCc
Confidence 345555555555 4555556665555544 3477777755432 5678 9999999988774311 00122
Q ss_pred ---ceEEcCCCCChh---hHHHHHHHHHcCCCC--eEEecCCC---CCCcCcccccCCcCCccchhHHHHHHHHHHHh-c
Q 020186 199 ---HNYCLPVLKREI---HRQAVVSAVTSGSRK--FFLGTDSA---PHERGRKECACGCAGIYNAPVALSLYAKVFEE-M 266 (329)
Q Consensus 199 ---~~k~~PPLR~~~---dr~aLw~al~~G~Id--~~i~SDHa---Ph~~~eK~~~~~~~Gi~~~e~~lpll~~~~~~-~ 266 (329)
..+++||+|+.. +++.||.++.+|..+ ++++|||+ |+..+++. ....|+.+++++++.+...+.. +
T Consensus 244 v~i~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~d~i~l~TD~~~~~p~~~~~g~--~~~~g~~~~~~~~~~~~~~v~~~~ 321 (387)
T cd01308 244 IDLTSSIDPQFRKEGEVRPSEALKRLLEQGVPLERITFSSDGNGSLPKFDENGN--LVGLGVGSVDTLLREVREAVKCGD 321 (387)
T ss_pred EEEECCCCccccccCccChHHHHHHHHHhCCCCCcEEEEECCCCCcccCccCCe--EEecCcCcHHHHHHHHHHHHHhCC
Confidence 355677777653 567889999988631 37899997 43332221 1125888888888888755544 5
Q ss_pred CCHHHHHHHHhhhhhhhcCCC-CC------cccEEEEecceee
Q 020186 267 GALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTKIPWKV 302 (329)
Q Consensus 267 ~~l~~~v~~~s~nPAkifgl~-~~------dADlvi~~~~~~v 302 (329)
+++++++++++.|||++||++ .| +|||+|||..+.+
T Consensus 322 i~~~~al~~~T~npA~~lg~~~~G~i~~G~~ADlvv~d~~~~~ 364 (387)
T cd01308 322 IPLEVALRVITSNVARILKLRKKGEIQPGFDADLVILDKDLDI 364 (387)
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCCCcCCCCcCCEEEEcCCCCE
Confidence 899999999999999999985 33 7999999644433
No 41
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=99.73 E-value=2.2e-16 Score=153.15 Aligned_cols=165 Identities=13% Similarity=0.043 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCe--EEEEecC-CHHHHHHHHcc-cC--CceEEEecchhhhcchhh------hcCCCCCC
Q 020186 131 DREKVFIDTILQPLIQRLPQLK--VVMEHIT-TMDAVKFVESC-KE--GFVAATVTPQHLVLNRNA------LFQGGLRP 198 (329)
Q Consensus 131 ~~E~~av~~~~~~~la~~~~~~--lhi~HvS-t~~sl~~i~~a-k~--~~vt~Et~phhL~l~~~~------~~~~~~~~ 198 (329)
..|..++.+.+ ..++.++++ .|++|++ ++.+++.++++ ++ ..+++ +|+||+.++.+. +.+ .|.
T Consensus 170 ~~~l~~~~~~a--~~~~~~~g~~~~i~vH~~~~~~~l~~v~~~l~~~Gv~~~~-~~~~H~~~~~~~~~~~~~~~~--~G~ 244 (388)
T PRK10657 170 VEELARLAAEA--RVGGLLSGKAGIVHVHMGDGKKGLQPLFELLENTDIPISQ-FLPTHVNRNEPLFEQALEFAK--KGG 244 (388)
T ss_pred HHHHHHHHHHH--HHHHHhcCCCCEEEEEeCCchHHHHHHHHHHHhcCCCcce-eeCcccCCCHHHHHHHHHHHH--cCC
Confidence 34445555554 444555543 7899999 79999998544 33 67775 999999986554 221 233
Q ss_pred ce--E-EcCCCCChhh---HHHHHHHHHcCC-CC-eEEecCCCCCCcC--cccccCCcCCccchhHHHHHHHHHH-HhcC
Q 020186 199 HN--Y-CLPVLKREIH---RQAVVSAVTSGS-RK-FFLGTDSAPHERG--RKECACGCAGIYNAPVALSLYAKVF-EEMG 267 (329)
Q Consensus 199 ~~--k-~~PPLR~~~d---r~aLw~al~~G~-Id-~~i~SDHaPh~~~--eK~~~~~~~Gi~~~e~~lpll~~~~-~~~~ 267 (329)
+. . ++||+|.+.+ .+.||+++.+|. +| .+++|||++.... +|. .+...|..+.+++++.+...+ ...+
T Consensus 245 ~~~v~~~~~~~~~~~~~~~~~~l~~~~~~G~~~d~v~l~tD~~~~~~~~~~~g-~~~~~g~~~~~~l~~~~~~~~~~~gi 323 (388)
T PRK10657 245 VIDLTTSDPDFLGEGEVAPAEALKRALEAGVPLSRVTLSSDGNGSLPKFDEDG-NLVGLGVGSVESLLEEVRELVKDEGL 323 (388)
T ss_pred eEEEecCCCcccccCccCHHHHHHHHHHcCCChhheEEECCCCCCCceeccCC-CEeccCcCchhhHHHHHHHHHHhcCC
Confidence 22 4 7999998754 488999999997 65 5789999654321 121 112247777778888877655 4478
Q ss_pred CHHHHHHHHhhhhhhhcCCC-CC------cccEEEEeccee
Q 020186 268 ALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTKIPWK 301 (329)
Q Consensus 268 ~l~~~v~~~s~nPAkifgl~-~~------dADlvi~~~~~~ 301 (329)
++++++++++.||||+||++ .| +||+++|+.++.
T Consensus 324 s~~~~l~~aT~npA~~lg~~~~G~l~~G~~AD~vv~~~~~~ 364 (388)
T PRK10657 324 PLEDALKPLTSNVARFLKLNGKGEILPGKDADLLVLDDDLR 364 (388)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCccCCCCccCEEEECCCCC
Confidence 99999999999999999994 23 799999974443
No 42
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=99.65 E-value=3e-14 Score=138.09 Aligned_cols=242 Identities=10% Similarity=0.006 Sum_probs=139.4
Q ss_pred cccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCC-ccEEEEEEEEeC-C---C-C--CHHHHHHHHhc--
Q 020186 5 TILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPAS-SNFTPLMTLYLT-D---T-T--SPDEIKLARKT-- 74 (329)
Q Consensus 5 ~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~-vd~~~~~~~~~~-~---~-~--~~~el~~l~~~-- 74 (329)
+.-.+++.+||||++||++.. ..+.+.+.......++...++ +++++++....+ . + . ..+++.++.+.
T Consensus 75 ~~~~~~l~~G~Ttv~d~g~~~--~~~~~~~~~~~~a~~~~gira~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (379)
T PRK12394 75 RPDMYMPPNGVTTVVDAGSAG--TANFDAFYRTVICASKVRIKAFLTVSPPGQTWSGYQENYDPDNIDENKIHALFRQYR 152 (379)
T ss_pred CHHHHHHhCCccEEEECCCCC--cccHHHHHHHHhhhhcceeeeEEeeecccccccCcccccChhHCCHHHHHHHHHHCc
Confidence 445668899999999998543 245554444432222211111 355544321000 0 0 1 13566666542
Q ss_pred CceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEE
Q 020186 75 GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVV 154 (329)
Q Consensus 75 G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lh 154 (329)
+.+.++|+++...... ...+ +.+.+.++.++++|.++.+|+++... | ..+.+ .+.+.-..-.|
T Consensus 153 ~~~~g~ki~~~~~~~~---~~~~--~~l~~~~~~A~~~g~~v~iH~~e~~~-------~---~~~~~--~~l~~g~~~~H 215 (379)
T PRK12394 153 NVLQGLKLRVQTEDIA---EYGL--KPLTETLRIANDLRCPVAVHSTHPVL-------P---MKELV--SLLRRGDIIAH 215 (379)
T ss_pred CcEEEEEEEEeccccc---ccch--HHHHHHHHHHHHcCCCEEEEeCCCCc-------c---HHHHH--HhcCCCCEEEe
Confidence 2356899986432110 1233 78999999999999999999997642 1 11122 11111112233
Q ss_pred EE-------ecCCHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCC-CCe
Q 020186 155 ME-------HITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS-RKF 226 (329)
Q Consensus 155 i~-------HvSt~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~-Id~ 226 (329)
.. |.+..+..+.++++++..++..+ .+| |+..+.+.+|+++.+|. .+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~----------------------~~g--~s~~~~~~~~~~l~~G~~~~- 270 (379)
T PRK12394 216 AFHGKGSTILTEEGAVLAEVRQARERGVIFDA----------------------ANG--RSHFDMNVARRAIANGFLPD- 270 (379)
T ss_pred cCCCCCCCcCCCCCCChHHHHHHHhCCeEEEe----------------------cCC--ccccchHHHHHHHHCCCCce-
Confidence 33 34444444444444432222111 111 44456788999999996 78
Q ss_pred EEecCCCCCCcCcccccCCcCCccchhHHHHHHHH-HHHhcCCHHHHHHHHhhhhhhhcCCC-C-C------cccEEEE-
Q 020186 227 FLGTDSAPHERGRKECACGCAGIYNAPVALSLYAK-VFEEMGALDKLEAFTSFNGPDFYGLP-R-N------TSKIKLT- 296 (329)
Q Consensus 227 ~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~-~~~~~~~l~~~v~~~s~nPAkifgl~-~-~------dADlvi~- 296 (329)
+|+|||+|... ... .+ ..|+.++. .....+++++++++.+.|||+++|++ + | +|||+++
T Consensus 271 ~lgTD~~~~~~---~~~----~~----~~l~~~~~~~~~~~~~~~~~~~~at~~~a~~~g~~~~~G~i~~G~~ADl~~~~ 339 (379)
T PRK12394 271 IISSDLSTITK---LAW----PV----YSLPWVLSKYLALGMALEDVINACTHTPAVLMGMAAEIGTLAPGAFADIAIFK 339 (379)
T ss_pred EEECCCCCCCc---ccC----cc----chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCccCEEEEe
Confidence 99999998752 110 11 13455543 33446899999999999999999995 3 3 6999999
Q ss_pred -eccee
Q 020186 297 -KIPWK 301 (329)
Q Consensus 297 -~~~~~ 301 (329)
+..|.
T Consensus 340 ~~~~~~ 345 (379)
T PRK12394 340 LKNRHV 345 (379)
T ss_pred cCcCcc
Confidence 34444
No 43
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=99.58 E-value=1.1e-13 Score=138.11 Aligned_cols=241 Identities=14% Similarity=0.092 Sum_probs=144.8
Q ss_pred chhcccCccEEEEC-----CCCCCCCCcHH--HHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEE
Q 020186 8 PICSVSHYGRAIVM-----PNLKPPITTTA--AAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAV 80 (329)
Q Consensus 8 ~~Aa~GGvTtvidm-----Pnt~p~~~~~~--~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~ 80 (329)
.+|++|||||+++| |++.|..+++. .++.+.+.++ .++ +||++++. +.....+++.++.++|+ .+|
T Consensus 151 ~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~l~~~~~aa~-~~p--vn~g~~g~---g~~~~~~~L~el~~aGA-~Gf 223 (573)
T PRK13206 151 DEALAAGITTLIGGGTGPAEGSKATTVTPGAWHLARMLEALD-GWP--VNVALLGK---GNTVSAEALWEQLRGGA-GGF 223 (573)
T ss_pred HHHHcCCeEEEEcCCCCccccCcccccccchhHHHHHHHHhh-cCc--eeEEEecC---cCcCCHHHHHHHHHCCC-cEE
Confidence 68999999999996 45566655554 3334444433 344 89999874 22345678999999995 699
Q ss_pred EEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 020186 81 KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT 160 (329)
Q Consensus 81 K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt 160 (329)
|+|..+ +.++ ..++++|+++++.|.++.+|||+-... -.+ .. .++...|.++|++|+..
T Consensus 224 Ki~~d~-------g~t~--~~i~~aL~~A~~~gv~V~iHadtlne~--------g~~-E~---t~aa~~gr~iH~~H~eg 282 (573)
T PRK13206 224 KLHEDW-------GSTP--AAIDACLRVADAAGVQVALHSDTLNEA--------GFV-ED---TLAAIAGRSIHAYHTEG 282 (573)
T ss_pred eecCcc-------CCCH--HHHHHHHHHHHHhCCEEEEECCCcccc--------chh-hH---HHHHhcCCeEEEEeccC
Confidence 998643 2333 789999999999999999999975421 112 11 35667899999999986
Q ss_pred H---HHHHHHHcccCCc-eEEEecc-------------------hhhhcc-hhhhcCCCCCCceEEcCCCCChhhHHHHH
Q 020186 161 M---DAVKFVESCKEGF-VAATVTP-------------------QHLVLN-RNALFQGGLRPHNYCLPVLKREIHRQAVV 216 (329)
Q Consensus 161 ~---~sl~~i~~ak~~~-vt~Et~p-------------------hhL~l~-~~~~~~~~~~~~~k~~PPLR~~~dr~aLw 216 (329)
. .+=++|+-+...+ +-..|.| |||--+ .+|+. + +--++.|===..|| .|
T Consensus 283 aggghapd~~~~~~~~n~lp~stnpt~p~~~nt~~e~~~m~m~~h~l~~~~~~d~~---f-a~srir~~ti~ae~--~l- 355 (573)
T PRK13206 283 AGGGHAPDIITVASHPNVLPSSTNPTRPHTVNTLDEHLDMLMVCHHLNPAVPEDLA---F-AESRIRPSTIAAED--VL- 355 (573)
T ss_pred CCcCcccHHHHhcCCCCCcCCCCCCCCCCcccchhhhhCeEEeeccCCCCCcchhh---h-hhhhccceeeccCc--hH-
Confidence 3 3456777664311 1122222 333222 11111 0 00111110001122 23
Q ss_pred HHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHH--HHHH-----------HhcCCHHHHHHHHhhhhhhh
Q 020186 217 SAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLY--AKVF-----------EEMGALDKLEAFTSFNGPDF 283 (329)
Q Consensus 217 ~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll--~~~~-----------~~~~~l~~~v~~~s~nPAki 283 (329)
...|.+- +++||-..- |--|-+..-|+. .... ..+++..+.+++.+.|||+.
T Consensus 356 --~d~G~~~-~~~SDs~~~------------~~~~e~~~~~~q~a~~~~~rr~~l~g~~~~~~~~v~~al~~yT~nPA~a 420 (573)
T PRK13206 356 --HDMGAIS-MIGSDSQAM------------GRIGEVVLRTWQTAHVMKRRRGALPGDGRADNNRARRYVAKYTICPAVA 420 (573)
T ss_pred --hhCCcEE-eccCCcccc------------ccccchhhhHHHHHHHHHhccCCCCCCCcccchhHHHHHHHHHHHHHHH
Confidence 3358887 888986431 111111111110 1111 23467899999999999999
Q ss_pred cCCCC--C------cccEEEEec
Q 020186 284 YGLPR--N------TSKIKLTKI 298 (329)
Q Consensus 284 fgl~~--~------dADlvi~~~ 298 (329)
+|++. | .|||++|+.
T Consensus 421 lG~~~~~GsLe~Gk~ADlVvld~ 443 (573)
T PRK13206 421 HGIDHEIGSVEVGKLADLVLWEP 443 (573)
T ss_pred hCCCcCCcccCCCCcCCEEEECc
Confidence 99852 3 699999953
No 44
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=99.56 E-value=1.9e-13 Score=135.88 Aligned_cols=137 Identities=15% Similarity=0.127 Sum_probs=102.4
Q ss_pred cchhcccCccEEEEC---C----CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeE
Q 020186 7 LPICSVSHYGRAIVM---P----NLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFA 79 (329)
Q Consensus 7 ~~~Aa~GGvTtvidm---P----nt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~ 79 (329)
..+|++|||||+++| | |+.|...+++.++.+.+.+++ .+ +||++++. +.+.++++|.++.++|+ .+
T Consensus 144 ~~aAlagGVTTvI~~G~gP~~gtnatp~t~g~~~l~~ml~aa~~-~p--in~g~~gk---g~~~~l~eL~e~~~aGA-~G 216 (567)
T cd00375 144 IEEALASGITTMIGGGTGPAAGTKATTCTPGPWNIKRMLQAADG-LP--VNIGFLGK---GNGSSPDALAEQIEAGA-CG 216 (567)
T ss_pred HHHHHcCCCcEEEcCCcCcccccCCCCCCCCHHHHHHHHHHhhc-CC--ceEEEEec---CccccHHHHHHHHHcCC-EE
Confidence 468999999999998 8 677777778888888777664 34 89999864 33456889999999996 59
Q ss_pred EEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Q 020186 80 VKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT 159 (329)
Q Consensus 80 ~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvS 159 (329)
||+|..+ +. +. ..++++|+++++.|.++++||+.-.. .-.+.. .++...|.++|++|+.
T Consensus 217 fK~~eD~-------g~-t~-~~i~~aL~~A~~~dv~VaiHadtlne--------~g~~E~----t~aa~~gr~iH~~H~e 275 (567)
T cd00375 217 LKLHEDW-------GA-TP-AAIDTCLSVADEYDVQVAIHTDTLNE--------SGFVED----TIAAIKGRTIHTYHTE 275 (567)
T ss_pred EEecCCC-------CC-CH-HHHHHHHHHHHhhCCEEEEECCCCCc--------chHHHH----HHHHhcCCeEEEEecC
Confidence 9998643 23 33 78999999999999999999996432 112221 3577789999999998
Q ss_pred CH---HHHHHHHccc
Q 020186 160 TM---DAVKFVESCK 171 (329)
Q Consensus 160 t~---~sl~~i~~ak 171 (329)
.. .+=++|+-+.
T Consensus 276 gaggghapdi~~~~~ 290 (567)
T cd00375 276 GAGGGHAPDIIKVAG 290 (567)
T ss_pred CCCcccchHHHHhcC
Confidence 63 3344555553
No 45
>PRK13985 ureB urease subunit beta; Provisional
Probab=99.55 E-value=1.5e-13 Score=136.21 Aligned_cols=241 Identities=11% Similarity=0.072 Sum_probs=148.6
Q ss_pred cchhcccCccEEEE-----CCCCCCCCCcHHH--HHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeE
Q 020186 7 LPICSVSHYGRAIV-----MPNLKPPITTTAA--AVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFA 79 (329)
Q Consensus 7 ~~~Aa~GGvTtvid-----mPnt~p~~~~~~~--l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~ 79 (329)
..+|++|||||+++ |||++|+.+++.. ++.+.+.+++ .+ +||++++. +...++++|.++.++|+ .+
T Consensus 144 ~~~AlagGVTTvI~~G~gP~~~T~p~~~tpg~~~i~~ml~~a~~-~p--vn~gf~gk---G~~~~l~eL~el~~aGA-~G 216 (568)
T PRK13985 144 IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEE-YS--MNLGFLGK---GNSSNDASLADQIEAGA-IG 216 (568)
T ss_pred HHHHhcCceEEEEccCcCCCCCCCCcCCCCcHHHHHHHHHHhhc-cC--ccEEEecC---CccCCHHHHHHHHHcCC-EE
Confidence 35799999999999 7899998877664 4556555543 33 89998864 22345788999999996 59
Q ss_pred EEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Q 020186 80 VKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT 159 (329)
Q Consensus 80 ~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvS 159 (329)
||++..+ +. +. ..++++|++++++|.++++||++-.. .-.+.. .++...|.++|++|+.
T Consensus 217 fK~~ed~-------g~-t~-~~I~~aL~vA~~~dv~V~iHtdtlne--------~g~~E~----t~aa~~gr~iH~~H~e 275 (568)
T PRK13985 217 FKIHEDW-------GT-TP-SAINHALDVADKYDVQVAIHTDTLNE--------AGCVED----TMAAIAGRTMHTFHTE 275 (568)
T ss_pred EEECCcc-------CC-CH-HHHHHHHHHHHHcCCEEEEeCCCCCC--------chhhHH----HHHHhcCCeEEEEecc
Confidence 9988533 22 33 78999999999999999999997532 111211 3566789999999998
Q ss_pred C---HHHHHHHHcccCC-----------ceEEEe---------cchhhhcc-hhhhcCCCCCCceEEcCCCCChhh-H-H
Q 020186 160 T---MDAVKFVESCKEG-----------FVAATV---------TPQHLVLN-RNALFQGGLRPHNYCLPVLKREIH-R-Q 213 (329)
Q Consensus 160 t---~~sl~~i~~ak~~-----------~vt~Et---------~phhL~l~-~~~~~~~~~~~~~k~~PPLR~~~d-r-~ 213 (329)
. ..+=++|+-+... +.|.-| .-|||--+ .+|+. + + .--+|.+.- - +
T Consensus 276 gaggghapdi~~~~~~~nvlp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~ed~a---f---a--~srir~~tiaaed 347 (568)
T PRK13985 276 GAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQ---F---A--DSRIRPQTIAAED 347 (568)
T ss_pred CCCccchhhHHHHcCCCCcccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhh---h---h--hhhccccccccCc
Confidence 6 3445677766431 122222 12444322 12221 0 0 011232211 1 1
Q ss_pred HHHHHHHcCCCCeEEecCCCCCC---------cC--ccccc-CCcCCccchhHHHHHHHHHHHhcCCHHHHHHHHhhhhh
Q 020186 214 AVVSAVTSGSRKFFLGTDSAPHE---------RG--RKECA-CGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGP 281 (329)
Q Consensus 214 aLw~al~~G~Id~~i~SDHaPh~---------~~--eK~~~-~~~~Gi~~~e~~lpll~~~~~~~~~l~~~v~~~s~nPA 281 (329)
-|.+ .|.|. +++||...-- +. .|... .| +++.- ..-...+++++.+++.+.|||
T Consensus 348 ~l~d---~G~~s-~~~SDs~~mgr~ge~~~r~~q~a~k~~~~~g--~l~~~--------~~~~dnl~v~eAL~~yTin~A 413 (568)
T PRK13985 348 TLHD---MGIFS-ITSSDSQAMGRVGEVITRTWQTADKNKKEFG--RLKEE--------KGDNDNFRIKRYLSKYTINPA 413 (568)
T ss_pred hhhh---CCcEE-EEeccchhhCcccceeeehHHHHHHHHHhcC--CCCCc--------cccccccCHHHHHHHHhHHHH
Confidence 2333 39998 9999975221 10 01000 01 11110 000135678899999999999
Q ss_pred hhcCCCC--C------cccEEEEe
Q 020186 282 DFYGLPR--N------TSKIKLTK 297 (329)
Q Consensus 282 kifgl~~--~------dADlvi~~ 297 (329)
+.+|+.. | .||||||+
T Consensus 414 ~A~G~e~~vGSLe~GK~ADlVv~d 437 (568)
T PRK13985 414 IAHGISEYVGSVEVGKVADLVLWS 437 (568)
T ss_pred HHcCcccCceeECCCCccCEEEEc
Confidence 9999832 3 69999994
No 46
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=99.53 E-value=5.1e-13 Score=132.91 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=96.7
Q ss_pred chhcccCccEEEEC---CCCCC-CCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEe
Q 020186 8 PICSVSHYGRAIVM---PNLKP-PITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLY 83 (329)
Q Consensus 8 ~~Aa~GGvTtvidm---Pnt~p-~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f 83 (329)
.+|++|||||+++| | +.| ..++++.++.+.+.++. .+ +||++++. +...++++|.++.++|+ .+||+|
T Consensus 149 ~aALagGVTTVi~gg~gP-t~p~~t~g~~~i~~~l~aa~~-~p--vN~g~~gk---G~~s~~aeL~eli~aGA-~GfKi~ 220 (569)
T PRK13308 149 DHALASGITTMLGGGLGP-TVGIDSGGPFNTGRMLQAAEA-WP--VNFGFLGR---GNSSKPAALIEQVEAGA-CGLKIH 220 (569)
T ss_pred HHHHcCCCcEEecCCcCC-CCCCCCCCHHHHHHHHHHHhc-CC--ccEEEEcC---CcccCHHHHHHHHHCCC-CEEeec
Confidence 68999999999995 6 444 46778888887776653 34 89999865 22245789999999995 599998
Q ss_pred eccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCC---
Q 020186 84 PAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT--- 160 (329)
Q Consensus 84 ~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt--- 160 (329)
+.+ +. +. ..+.++|++++++|.++++||+.-.. .-.+.. .++...|.++|++|+.+
T Consensus 221 ed~-------g~-t~-~~i~~aL~~A~~~dv~VaiHadtlne--------~g~~E~----t~~a~~gr~iH~~H~egagg 279 (569)
T PRK13308 221 EDW-------GA-MP-AAIDTCLEVADEYDFQVQLHTDTLNE--------SGFVED----TLAAIGGRTIHMYHTEGAGG 279 (569)
T ss_pred CCC-------CC-CH-HHHHHHHHHHHhcCCEEEEeCCCcCc--------chHHHH----HHHHhcCCeEEEEeccCCcc
Confidence 643 22 33 78999999999999999999997421 111221 24556699999999986
Q ss_pred ---HHHHHHHHc
Q 020186 161 ---MDAVKFVES 169 (329)
Q Consensus 161 ---~~sl~~i~~ 169 (329)
++.++++.+
T Consensus 280 ghapd~l~~~~~ 291 (569)
T PRK13308 280 GHAPDIIRVVGE 291 (569)
T ss_pred CchhHHHHHhCC
Confidence 445555543
No 47
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.53 E-value=1.6e-12 Score=124.02 Aligned_cols=240 Identities=12% Similarity=0.051 Sum_probs=128.7
Q ss_pred ecccchhcccCccEEEECCCCCCCCCcHHHHHHHH-HHHHh--hCCCCccEEEEEEEEeCCCC-------CHHHHHHH--
Q 020186 4 ITILPICSVSHYGRAIVMPNLKPPITTTAAAVAYR-ESILK--ALPASSNFTPLMTLYLTDTT-------SPDEIKLA-- 71 (329)
Q Consensus 4 ~~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~-~~~~~--~~~~~vd~~~~~~~~~~~~~-------~~~el~~l-- 71 (329)
.++..+|++||+|||+||||+.+ ++.+.+..+. ++... .+. +||++++.+ .... ..+++.++
T Consensus 52 ~~~~~~a~~~GvTtvvd~~~~~~--~~~~~~~~~~~~~~~~~v~a~--~~~~~~g~~--~~~~~~~~~~~~~~~l~~~~~ 125 (338)
T cd01307 52 DRPDMIGVKSGVTTVVDAGSAGA--DNIDGFRYTVIERSATRVYAF--LNISRVGLV--AQDELPDPDNIDEDAVVAAAR 125 (338)
T ss_pred CCHhHHHHcCceeEEEeCCCCCC--CCHHHHHHHHHHhhhceEEEE--Eeeeccccc--cccccCChhHCCHHHHHHHHH
Confidence 35667899999999999997665 5555533333 33333 222 799888754 2111 11223222
Q ss_pred -HhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCC
Q 020186 72 -RKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ 150 (329)
Q Consensus 72 -~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~ 150 (329)
...| +.+||+|+....+. ...+ ..+.+.++.++++|.++++|+++... + +..++ .+.+.-.
T Consensus 126 e~~~g-i~gik~~~~~~~~~-~~~~----~~l~~~~~~a~~~~~pi~vH~~~~~~-------~---~~~~~--~~l~~g~ 187 (338)
T cd01307 126 EYPDV-IVGLKARASKSVVG-EWGI----KPLELAKKIAKEADLPLMVHIGSPPP-------I---LDEVV--PLLRRGD 187 (338)
T ss_pred HCcCc-EEEEEEEeeccccc-ccCC----cHHHHHHHHHHHcCCCEEEEeCCCCC-------C---HHHHH--HHhcCCC
Confidence 3357 56999998532211 1122 23778888999999999999998742 1 22222 1222222
Q ss_pred CeEEEEecCCHHH-------HHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCC
Q 020186 151 LKVVMEHITTMDA-------VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 223 (329)
Q Consensus 151 ~~lhi~HvSt~~s-------l~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~ 223 (329)
...|..+-+.... .+.++++.+..++..++.+ .... ......+++..|.
T Consensus 188 ~~~H~~~g~~~~~~~~~~~~~~~~~~~~~~G~~~d~~~G---------------~~~~---------~~~~~~~l~~~G~ 243 (338)
T cd01307 188 VLTHCFNGKPNGIVDEEGEVLPLVRRARERGVIFDVGHG---------------TASF---------SFRVARAAIAAGL 243 (338)
T ss_pred EEEeccCCCCCCCCCCCCcHHHHHHHHHhCCEEEEeCCC---------------CCch---------hHHHHHHHHHCCC
Confidence 3334443322000 1222222223344442210 0000 0011233456786
Q ss_pred -CCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHHHH-HhcCCHHHHHHHHhhhhhhhcCCCC-C------cccEE
Q 020186 224 -RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVF-EEMGALDKLEAFTSFNGPDFYGLPR-N------TSKIK 294 (329)
Q Consensus 224 -Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~-~~~~~l~~~v~~~s~nPAkifgl~~-~------dADlv 294 (329)
.+ +++||..+-. + ...+.. .++.+...+ ...++++++.++++.||||+||+++ | .|||+
T Consensus 244 ~~~-~lstD~~~~~---~---~~~p~~-----~l~~~l~~l~~~gi~~ee~~~~~T~NpA~~lgl~~~G~l~~G~~ad~~ 311 (338)
T cd01307 244 LPD-TISSDIHGRN---R---TNGPVY-----ALATTLSKLLALGMPLEEVIEAVTANPARMLGLAEIGTLAVGYDADLT 311 (338)
T ss_pred CCe-eecCCccccC---C---CCCccc-----cHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCCccCCCCcCCEE
Confidence 46 8899973211 1 011111 122222222 3477999999999999999999953 3 69999
Q ss_pred EE---ecceeec
Q 020186 295 LT---KIPWKVP 303 (329)
Q Consensus 295 i~---~~~~~v~ 303 (329)
++ +.++++.
T Consensus 312 v~~~~~~~~~~~ 323 (338)
T cd01307 312 VFDLKDGRVELV 323 (338)
T ss_pred EEeCCCCCeEEE
Confidence 99 2445444
No 48
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=99.51 E-value=1.9e-12 Score=129.81 Aligned_cols=246 Identities=14% Similarity=0.055 Sum_probs=147.3
Q ss_pred cchhcccCccEEEE-------CCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeE
Q 020186 7 LPICSVSHYGRAIV-------MPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFA 79 (329)
Q Consensus 7 ~~~Aa~GGvTtvid-------mPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~ 79 (329)
..+|++|||||+++ |||+.|.......++.+.+.+++ .+ +||++++. +......+|.++.++|+ .+
T Consensus 148 ~~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~~a~~-~p--vn~g~~gk---g~~~~~~~l~el~~aGa-~g 220 (572)
T PRK13309 148 AYHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLRSIEG-LP--VNVGILGK---GNSYGRGPLLEQAIAGV-AG 220 (572)
T ss_pred HHHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHhcc-CC--cCEEEEcC---CCCCCHHHHHHHHhcCc-EE
Confidence 35899999999995 55776777777788877777654 34 89998864 22234678889999996 59
Q ss_pred EEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Q 020186 80 VKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT 159 (329)
Q Consensus 80 ~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvS 159 (329)
||+|..+ +. +. ..+++++++++++|.++.+||+.-.. ...+.. .+++..+.++|++|..
T Consensus 221 fk~~~d~-------g~-t~-~~L~~aLe~A~~~gv~VaiH~d~lnE--------~g~vE~----~~aa~~grpih~~H~~ 279 (572)
T PRK13309 221 YKVHEDW-------GA-TA-AALRHALRVADEVDIQVAVHTDSLNE--------CGYVED----TIDAFEGRTIHTFHTE 279 (572)
T ss_pred EEecCcC-------Cc-CH-HHHHHHHHHHHhcCCEEEEeCCcccc--------chhHHH----HHHHhCCCceeeeecc
Confidence 9998643 22 33 78999999999999999999997632 222222 3578889999999997
Q ss_pred C---HHHHHHHHcccCCc-eEEEecc-------------------hhhhcc-hhhhcCCCCCCceEEcCCCCChhhHHHH
Q 020186 160 T---MDAVKFVESCKEGF-VAATVTP-------------------QHLVLN-RNALFQGGLRPHNYCLPVLKREIHRQAV 215 (329)
Q Consensus 160 t---~~sl~~i~~ak~~~-vt~Et~p-------------------hhL~l~-~~~~~~~~~~~~~k~~PPLR~~~dr~aL 215 (329)
. ..+=++|+-+...+ +-..|.| |||--+ .+|.. +.. ==||.+ |-+-
T Consensus 280 Gaggghapd~~~~~~~~~~~~~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~D~~------~a~--srig~e--~~~a 349 (572)
T PRK13309 280 GAGGGHAPDIIKVASQTNVLPSSTNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVA------FAE--SRVRPE--TIAA 349 (572)
T ss_pred CcccCCchhHHHhcCCCCcccCCCCCCCCCcccchHhhhchhhhhccCCCCCCCChh------HHH--HhhCch--hhcc
Confidence 5 33445555553311 1122222 333221 11110 000 002222 2233
Q ss_pred H-HHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHH------H--HHHhcCCHHHHHHHHhhhhhhhcCC
Q 020186 216 V-SAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYA------K--VFEEMGALDKLEAFTSFNGPDFYGL 286 (329)
Q Consensus 216 w-~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~------~--~~~~~~~l~~~v~~~s~nPAkifgl 286 (329)
| ..+..|.+- +++||+.--.+ .-..+ +.++++..-.-. . .....+++.+.+++.+.|||+.+|+
T Consensus 350 ~~~l~daGa~~-~~gSD~pv~gr-~~~~p-----~~~iq~Av~rk~~~g~l~~~~~~~~~~~v~~aL~~yT~n~A~a~g~ 422 (572)
T PRK13309 350 ENVLHDMGVIS-MFSSDSQAMGR-VGENW-----LRAIQTADAMKAARGKLPEDAAGNDNFRVLRYVAKITINPAITQGV 422 (572)
T ss_pred hhHHHhCCCEE-EEcCCCCcccC-CcccH-----HHHHHHHHHHHhccCCCCccCCCcccccHHHHHHHHhHHHHHHcCc
Confidence 3 335568887 99999732110 00000 001110110000 0 0013457888999999999999998
Q ss_pred C-C-C------cccEEEEe
Q 020186 287 P-R-N------TSKIKLTK 297 (329)
Q Consensus 287 ~-~-~------dADlvi~~ 297 (329)
. + | .|||+||+
T Consensus 423 e~~~GsLe~Gk~ADlvvld 441 (572)
T PRK13309 423 SHVIGSVEVGKMADLVLWE 441 (572)
T ss_pred ccCccccCCCCcCCEEEEc
Confidence 3 2 3 69999994
No 49
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=99.49 E-value=2.5e-12 Score=128.66 Aligned_cols=135 Identities=16% Similarity=0.140 Sum_probs=95.0
Q ss_pred cchhcccCccEEEEC---CCC--CCCCCcH--HHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeE
Q 020186 7 LPICSVSHYGRAIVM---PNL--KPPITTT--AAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFA 79 (329)
Q Consensus 7 ~~~Aa~GGvTtvidm---Pnt--~p~~~~~--~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~ 79 (329)
..+|++|||||+++| |++ .|..+++ ..++.+.+.+++ .. +||++++. +.....+++.++.++|+ .+
T Consensus 144 ~~aALagGVTTVi~mg~gP~~gt~~~t~tpG~~~l~~~l~~a~~-~p--in~g~~g~---g~~~~~~~L~e~i~aGA-~g 216 (568)
T PRK13207 144 IEEALASGVTTMIGGGTGPATGTNATTCTPGPWHIHRMLQAADA-FP--MNIGFLGK---GNASLPEALEEQIEAGA-IG 216 (568)
T ss_pred HHHHHcCCCCEEEcCCcCCccCCcccccccchHHHHHHHHHhhc-CC--ceEEEEcC---CCcccHHHHHHHHHcCC-CE
Confidence 468999999999999 754 4554443 345555554432 33 89998864 22345788999999996 59
Q ss_pred EEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Q 020186 80 VKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT 159 (329)
Q Consensus 80 ~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvS 159 (329)
||+|..+ +.+ . ..+.++|+++++.|.++++||+.-.. .-.+. . .++...|..+|++|+.
T Consensus 217 fKi~~d~-------g~t-~-~~l~~aL~~A~~~gv~V~iHa~tlne--------~G~~e-~---t~~a~~g~~iH~~H~e 275 (568)
T PRK13207 217 LKLHEDW-------GAT-P-AAIDNCLSVADEYDVQVAIHTDTLNE--------SGFVE-D---TIAAFKGRTIHTFHTE 275 (568)
T ss_pred EeecCCC-------CCC-H-HHHHHHHHHHHHhCCEEEEeCCCccc--------chHHH-H---HHHhcCCCEEEEEeec
Confidence 9999643 223 3 78999999999999999999986431 11111 1 3567789999999987
Q ss_pred ------CHHHHHHHHc
Q 020186 160 ------TMDAVKFVES 169 (329)
Q Consensus 160 ------t~~sl~~i~~ 169 (329)
.++-++++.+
T Consensus 276 gaggghapdii~~~~~ 291 (568)
T PRK13207 276 GAGGGHAPDIIKVAGE 291 (568)
T ss_pred CCCcCCchHHHHHhhc
Confidence 4555666654
No 50
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.47 E-value=4.2e-12 Score=115.06 Aligned_cols=225 Identities=20% Similarity=0.234 Sum_probs=138.1
Q ss_pred cccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC------CH----HHHHHHHhc
Q 020186 5 TILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT------SP----DEIKLARKT 74 (329)
Q Consensus 5 ~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~------~~----~el~~l~~~ 74 (329)
+.+..++.+||||+++|++..+.....+.++...+.+.+... +.+.+..++ .... .. +++..+.+.
T Consensus 39 ~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~ 114 (275)
T cd01292 39 RALEALLAGGVTTVVDMGSTPPPTTTKAAIEAVAEAARASAG--IRVVLGLGI--PGVPAAVDEDAEALLLELLRRGLEL 114 (275)
T ss_pred HHHHHHHhcCceEEEeeEeecCccccchHHHHHHHHHHHhcC--eeeEEeccC--CCCccccchhHHHHHHHHHHHHHhc
Confidence 345678999999999999877665544555555555544212 444443332 2111 12 223333333
Q ss_pred CceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEE
Q 020186 75 GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVV 154 (329)
Q Consensus 75 G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lh 154 (329)
| +.++|++..+. ....++ +.++++++.+++.|.++.+|+.+.... ...+.+++ .+... +.+++
T Consensus 115 ~-~~gi~~~~~~~----~~~~~~--~~~~~~~~~a~~~~~~i~~H~~~~~~~-------~~~~~~~~--~~~~~-~~~~~ 177 (275)
T cd01292 115 G-AVGLKLAGPYT----ATGLSD--ESLRRVLEEARKLGLPVVIHAGELPDP-------TRALEDLV--ALLRL-GGRVV 177 (275)
T ss_pred C-CeeEeeCCCCC----CCCCCc--HHHHHHHHHHHHcCCeEEEeeCCcccC-------ccCHHHHH--HHHhc-CCCEE
Confidence 6 46888875331 111234 789999999999999999999876420 01123333 22332 78999
Q ss_pred EEecCC--HHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCC
Q 020186 155 MEHITT--MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDS 232 (329)
Q Consensus 155 i~HvSt--~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDH 232 (329)
+.|... .+.++.+++ ..+++++||+++.++. +....+..+.+.+..|... +++||+
T Consensus 178 ~~H~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~g~~~-~lgTD~ 235 (275)
T cd01292 178 IGHVSHLDPELLELLKE---AGVSLEVCPLSNYLLG------------------RDGEGAEALRRLLELGIRV-TLGTDG 235 (275)
T ss_pred EECCccCCHHHHHHHHH---cCCeEEECCccccccc------------------CCcCCcccHHHHHHCCCcE-EEecCC
Confidence 999997 788888775 4789999999876542 1223345577788889887 999999
Q ss_pred CCCCcCcccccCCcCCccchhHHHHHHHHHHHhcCCHHHHHHHHhhhhhhh
Q 020186 233 APHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 283 (329)
Q Consensus 233 aPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~~~~~~l~~~v~~~s~nPAki 283 (329)
.+... + ..+-..+-.+.......++++++.++++.||||.
T Consensus 236 ~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 236 PPHPL----------G-TDLLALLRLLLKVLRLGLSLEEALRLATINPARA 275 (275)
T ss_pred CCCCC----------C-CCHHHHHHHHHHHHhcCCCHHHHHHHHhccccCC
Confidence 66530 0 1100011111111111369999999999999984
No 51
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=99.42 E-value=1.7e-11 Score=123.97 Aligned_cols=227 Identities=11% Similarity=0.077 Sum_probs=135.5
Q ss_pred cchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE------eCCCC--CHHHHHHHHhc-Cce
Q 020186 7 LPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY------LTDTT--SPDEIKLARKT-GVV 77 (329)
Q Consensus 7 ~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~------~~~~~--~~~el~~l~~~-G~v 77 (329)
+.+++.||+|||++|||+.|.++..+.++.+.+.++ .++ +||.+..... -+.+. ..+++.++.+. | +
T Consensus 70 ~~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~-~~~--~d~~~~~~s~vp~~~~e~~g~~~~~~~i~~~~~~~~-V 145 (552)
T TIGR01178 70 AKLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAK-KTP--LNFYFMLPSCVPALQFETSGAVLTAEDIDELMELDE-V 145 (552)
T ss_pred HHHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhh-cCC--cEEEEECCCCCCCCcccCCCCccCHHHHHHHHcCCC-c
Confidence 357899999999999999999999999988888665 345 8874332200 00111 46788888865 7 5
Q ss_pred eEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEe
Q 020186 78 FAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEH 157 (329)
Q Consensus 78 ~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~H 157 (329)
.++|.||+|. +....| ..+.+.++.+++.|.++.+||+.-. .. .+.. +++ .|.. .+|
T Consensus 146 ~glke~m~~~----~v~~~d--~~~l~~i~~a~~~g~~I~gHap~l~------~~---eL~~----~~~--aGi~--~dH 202 (552)
T TIGR01178 146 LGLAEVMDYP----GVINAD--IEMLNKINSARKRNKVIDGHCPGLS------GK---LLNK----YIS--AGIS--NDH 202 (552)
T ss_pred cEEEEEecch----hhcCCC--HHHHHHHHHHHhCCCEEEecCCCCC------HH---HHHH----HHH--cCCC--CCc
Confidence 7999999752 222334 6677778999999999999999432 11 1221 122 2443 456
Q ss_pred cC--CHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHH--cCCCCeEEecCC-
Q 020186 158 IT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVT--SGSRKFFLGTDS- 232 (329)
Q Consensus 158 vS--t~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~--~G~Id~~i~SDH- 232 (329)
-+ -.++.+.++. -++..+ ++ |+. ..+-+.+..++. ++.-. +++||-
T Consensus 203 e~~s~~ea~e~~~~----Gm~~~i-------------r~--gs~---------~~n~~~~~~~~~~~~~~~~-~l~TD~~ 253 (552)
T TIGR01178 203 ESTSIEEAREKLRL----GMKLMI-------------RE--GSA---------AKNLEALHPLINEKNCRSL-MLCTDDR 253 (552)
T ss_pred CcCCHHHHHHHHHC----CCEEEE-------------eC--Ccc---------ccCHHHHHHHHhhcCCceE-EEEeCCC
Confidence 43 3455554442 122221 11 111 112233444443 33445 999992
Q ss_pred CCCCcCcccccCCcCCccchhHHHHHHH-HHHHhcCCHHHHHHHHhhhhhhhcCCCC-C------cccEEEEe--cceee
Q 020186 233 APHERGRKECACGCAGIYNAPVALSLYA-KVFEEMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK--IPWKV 302 (329)
Q Consensus 233 aPh~~~eK~~~~~~~Gi~~~e~~lpll~-~~~~~~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi~~--~~~~v 302 (329)
-|...-+. | .+.-.. ......+++++++++.|.|||+.+|++. | .|||++++ +.+++
T Consensus 254 ~~~~~~~~-------g------~l~~~v~~ai~~g~~~~~Al~maT~npA~~lgl~~~G~I~pG~~ADlvvl~~l~~~~v 320 (552)
T TIGR01178 254 HVNDILNE-------G------HINHIVRRAIEHGVDPFDALQMASINPAEHFGIDVGGLIAPGDPADFVILKDLRNFKV 320 (552)
T ss_pred ChhHHHhc-------C------CHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCcccCCCCcCCEEEECCCCCceE
Confidence 12111000 1 122222 2233467999999999999999999953 3 79999994 44544
No 52
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=99.37 E-value=5e-11 Score=115.94 Aligned_cols=196 Identities=18% Similarity=0.155 Sum_probs=119.2
Q ss_pred EEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEec-CCCCCCCChhHHH---HHHHHHHHHHHHHhcCCCeEE
Q 020186 79 AVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHG-EVTDPIVDIFDRE---KVFIDTILQPLIQRLPQLKVV 154 (329)
Q Consensus 79 ~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHa-Ed~~~~~~~~~~E---~~av~~~~~~~la~~~~~~lh 154 (329)
.+|++++.. +...++ . +.+.++++.+++.|.++.+|+ |+.... . ...+ ...+.. + .-....+.++.
T Consensus 178 ~~k~~~~~~---~~~~~~-~-~~l~~~~~~A~~~g~~v~~H~~e~~~~~-~-~~~~~~~~~~~~~-~--~~~~~~~~~~~ 247 (411)
T cd01298 178 RIRVALAPH---APYTCS-D-ELLREVAELAREYGVPLHIHLAETEDEV-E-ESLEKYGKRPVEY-L--EELGLLGPDVV 247 (411)
T ss_pred ceEEEEeCC---CCccCC-H-HHHHHHHHHHHHcCCcEEEEecCCHHHH-H-HHHHHhCCCHHHH-H--HHcCCCCCCeE
Confidence 579887532 112233 3 789999999999999999996 543210 0 0000 001111 1 11223457766
Q ss_pred EEecC--CHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCC
Q 020186 155 MEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDS 232 (329)
Q Consensus 155 i~HvS--t~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDH 232 (329)
|.|.+ +.+.++.+++ ..+++++||++-.. ++. ..|| +++.+..|..- +++||+
T Consensus 248 i~H~~~l~~~~~~~l~~---~gi~~~~~p~~~~~---------~~~---~~~~---------~~~~~~~Gv~~-~~GsD~ 302 (411)
T cd01298 248 LAHCVWLTDEEIELLAE---TGTGVAHNPASNMK---------LAS---GIAP---------VPEMLEAGVNV-GLGTDG 302 (411)
T ss_pred EEEecCCCHHHHHHHHH---cCCeEEEChHHhhh---------hhh---CCCC---------HHHHHHCCCcE-EEeCCC
Confidence 66666 4566666664 46889999985221 111 1244 44667778886 999998
Q ss_pred CCCCcCcccccCCcCCccch-hHHHHHHHHHH-H---hcCCHHHHHHHHhhhhhhhcCCC-CC------cccEEEE--ec
Q 020186 233 APHERGRKECACGCAGIYNA-PVALSLYAKVF-E---EMGALDKLEAFTSFNGPDFYGLP-RN------TSKIKLT--KI 298 (329)
Q Consensus 233 aPh~~~eK~~~~~~~Gi~~~-e~~lpll~~~~-~---~~~~l~~~v~~~s~nPAkifgl~-~~------dADlvi~--~~ 298 (329)
.+... ....+ |..+++++... . ..+++++++++.+.|||+.+|++ .| +|||+|+ +.
T Consensus 303 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~G~i~~G~~ADlvv~d~~~ 372 (411)
T cd01298 303 AASNN----------NLDMFEEMRLAALLQKLAHGDPTALPAEEALEMATIGGAKALGLDEIGSLEVGKKADLILIDLDG 372 (411)
T ss_pred CccCC----------CcCHHHHHHHHHHHhccccCCCCcCCHHHHHHHHHhhHHHHhCCccCCCcCCCccCCEEEEeCCC
Confidence 64321 11111 33344333211 1 15799999999999999999986 33 6999999 46
Q ss_pred ceeecCCccCcCCcccccCCCc
Q 020186 299 PWKVPEAFSFSFGDIIPMFAGN 320 (329)
Q Consensus 299 ~~~v~~~~~~s~~~~spf~~G~ 320 (329)
.|.+..++++++..|+++ .+.
T Consensus 373 ~~~~~~~~~~~~~~~~~~-~~~ 393 (411)
T cd01298 373 PHLLPVHDPISHLVYSAN-GGD 393 (411)
T ss_pred CccCCccchhhHheEecC-CCC
Confidence 788777788777766665 443
No 53
>PRK07583 cytosine deaminase-like protein; Validated
Probab=99.34 E-value=6.1e-11 Score=117.12 Aligned_cols=247 Identities=13% Similarity=0.077 Sum_probs=137.2
Q ss_pred cccchhcccCcc---EEEE-CCCCCCCCCcHHHHHHHHHHHHhhCC-CC-ccEEEEEEEEeCCCCCHHHHHHHH-hcCce
Q 020186 5 TILPICSVSHYG---RAIV-MPNLKPPITTTAAAVAYRESILKALP-AS-SNFTPLMTLYLTDTTSPDEIKLAR-KTGVV 77 (329)
Q Consensus 5 ~~~~~Aa~GGvT---tvid-mPnt~p~~~~~~~l~~~~~~~~~~~~-~~-vd~~~~~~~~~~~~~~~~el~~l~-~~G~v 77 (329)
.++.+|+++|+| +.+| ++... ..+.+.+....+....... .+ ++|.+++.. ....+++.++. +.|.+
T Consensus 126 ~~~~~a~~~Gtt~vRt~vd~~~~~~--~~~~~~i~~~~~~~~~~~~~~~v~~~p~~~~~----~~~~~eL~~~v~~~~gv 199 (438)
T PRK07583 126 FGLRCAYAHGTSAIRTHLDSFAPQA--AISWEVFAELREAWAGRIALQAVSLVPLDAYL----TDAGERLADLVAEAGGL 199 (438)
T ss_pred HHHHHHHHhChhhEEeeeccCCCCc--ccHHHHHHHHHHHhhccCeEEEEEecChhhcc----CchHHHHHHHHHHcCCE
Confidence 467889999999 6666 33222 2233333222332222100 00 234444332 22235666665 34335
Q ss_pred eEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEec-CCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEE
Q 020186 78 FAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHG-EVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVME 156 (329)
Q Consensus 78 ~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHa-Ed~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~ 156 (329)
.++|.|+.+ .++ +.++++++.+++.|.++.+|+ |+.+.. + ..+.+........-...++++.
T Consensus 200 ~g~~~~~~~---------~~d-~~l~~i~~lA~~~G~~v~vH~~E~~~~~------~-~~l~~~~~~~~~~G~~~~v~i~ 262 (438)
T PRK07583 200 LGGVTYMNP---------DLD-AQLDRLFRLARERGLDLDLHVDETGDPA------S-RTLKAVAEAALRNGFEGKVTCG 262 (438)
T ss_pred EeCCCCCCC---------CHH-HHHHHHHHHHHHhCCCcEEeECCCCCch------H-HHHHHHHHHHHHhCCCCCEEEE
Confidence 687766532 123 789999999999999999999 544321 1 1122222101122233579999
Q ss_pred ecCCH---------HHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeE
Q 020186 157 HITTM---------DAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFF 227 (329)
Q Consensus 157 HvSt~---------~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~ 227 (329)
|...- +.++.+++ ..++.-+||...+..... .....|+.|.....+.|++ .|.-. +
T Consensus 263 H~~~l~~~~~~~~~~~i~~la~---~gv~vv~~P~~~~~l~~~--------~~~~~p~~~~~~~v~~l~~---aGV~v-a 327 (438)
T PRK07583 263 HCCSLAVQPEEQAQATIALVAE---AGIAIVSLPMCNLYLQDR--------QPGRTPRWRGVTLVHELKA---AGIPV-A 327 (438)
T ss_pred eccchhcCCHHHHHHHHHHHHH---cCCeEEECcchhhhhcCC--------CcCCCCCCCCcchHHHHHH---CCCeE-E
Confidence 98652 34555544 567778899864332111 1112466666555555554 48776 9
Q ss_pred EecCCCCCCcCcccccCCcCC-ccchhHHHHHHHHHHHhcCCHHHHHHHHhhhhhhhcCCCC-C------cccEEEEe
Q 020186 228 LGTDSAPHERGRKECACGCAG-IYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK 297 (329)
Q Consensus 228 i~SDHaPh~~~eK~~~~~~~G-i~~~e~~lpll~~~~~~~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi~~ 297 (329)
++|||.+- +|.+.| ...++.+..+.. ......++++++++.+.|||+++|++. | .|||+|+|
T Consensus 328 lGtD~~~d-------~~~p~g~~~~~~~~~~a~~-~~~~~~~~~~al~~~T~~~A~~lg~~~~G~i~~G~~ADlvv~d 397 (438)
T PRK07583 328 VASDNCRD-------PFYAYGDHDMLEVFREAVR-ILHLDHPYDDWPAAVTTTPADIMGLPDLGRIAVGAPADLVLFK 397 (438)
T ss_pred EEeCCCCC-------CCCCCCCcCHHHHHHHHHH-HHhcCCcHHHHHHHHhHHHHHHcCCCCCCCcCCCCCCCEEEEc
Confidence 99999641 222223 222233332221 111246889999999999999999853 3 69999994
No 54
>PRK09237 dihydroorotase; Provisional
Probab=99.29 E-value=9e-10 Score=106.78 Aligned_cols=233 Identities=15% Similarity=0.091 Sum_probs=121.6
Q ss_pred cccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCC-ccEEEEEEEEeCCC-----CCHHHHHHHHh---cC
Q 020186 5 TILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPAS-SNFTPLMTLYLTDT-----TSPDEIKLARK---TG 75 (329)
Q Consensus 5 ~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~-vd~~~~~~~~~~~~-----~~~~el~~l~~---~G 75 (329)
+...+|+.|||||+++||++.| ++.+.+..+..+..+....+ +|+.+++..+-... ...+++.++.+ .|
T Consensus 72 ~~~~~~~~~G~Ttv~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (380)
T PRK09237 72 EPDEVGVRSGVTTVVDAGSAGA--DNFDDFRKLTIEASKTRVLAFLNISRIGLLAQDELADLEDIDADAVAEAVKRNPDF 149 (380)
T ss_pred CHHHHHHhCCcCEEEECCCCCC--CCHHHHHHHHHhhhCcEEEEEEeeecccccccchhcCHhHCCHHHHHHHHHhCcCc
Confidence 4457899999999999997554 56665554444321110001 45555443210000 12345566654 35
Q ss_pred ceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEE
Q 020186 76 VVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVM 155 (329)
Q Consensus 76 ~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi 155 (329)
+.+||.+|.+.... ..++++ ..+.+.+ +++.|+++.+|+++... +...+.+ .+ +.-..-.|.
T Consensus 150 -v~glk~~~~~~v~~-~~~~~~--~~~~~~~--a~~~g~~v~~H~~~~~~-------~~~~l~~----~l-~~g~~~~H~ 211 (380)
T PRK09237 150 -IVGIKARMSSSVVG-DNGIEP--LELAKAI--AAEANLPLMVHIGNPPP-------SLEEILE----LL-RPGDILTHC 211 (380)
T ss_pred -EEEEEEEEeccccc-ccCCch--HHHHHHH--HHhcCCCEEEEcCCCCC-------CHHHHHh----hc-cCCCEEEec
Confidence 57999999653221 222333 3444444 34889999999998742 1122222 12 222233444
Q ss_pred EecCC-----------HHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCC-
Q 020186 156 EHITT-----------MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS- 223 (329)
Q Consensus 156 ~HvSt-----------~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~- 223 (329)
.|-+. ..+.+.++ ..++.+.+.+ .... +-+.+.+.+..|.
T Consensus 212 ~~~~~~~~~~~~~~~~~~a~~~l~----~G~~~~ig~g---------------~~~~---------~~~~~~~l~~~g~~ 263 (380)
T PRK09237 212 FNGKPNRILDEDGELRPSVLEALE----RGVRLDVGHG---------------TASF---------SFKVAEAAIAAGIL 263 (380)
T ss_pred CCCCCCCccCCCCcchHHHHHHHH----CCEEEEecCC---------------CCcc---------cHHHHHHHHHCCCC
Confidence 44333 12222222 2334443211 1000 1112234456674
Q ss_pred CCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHH-HHHhcCCHHHHHHHHhhhhhhhcCCCC-C------cccEEE
Q 020186 224 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAK-VFEEMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKL 295 (329)
Q Consensus 224 Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~-~~~~~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi 295 (329)
.+ +++||..|-.. + ..++. .++.... .....++++++++.++.|||++||+++ | .|||++
T Consensus 264 ~~-~l~tD~~~~~~--~----~~~~~-----~l~~~~~~~~~~g~~~~~al~~aT~n~A~~lgl~~~G~l~~G~~ADlvv 331 (380)
T PRK09237 264 PD-TISTDIYCRNR--I----NGPVY-----SLATVMSKFLALGMPLEEVIAAVTKNAADALRLPELGRLQVGSDADLTL 331 (380)
T ss_pred ce-EEECCCCCCCc--c----cchHh-----HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCCCCCcCCCCCcCCEEE
Confidence 57 89999754221 0 00111 1222222 223467999999999999999999952 3 699999
Q ss_pred Ee
Q 020186 296 TK 297 (329)
Q Consensus 296 ~~ 297 (329)
++
T Consensus 332 ~~ 333 (380)
T PRK09237 332 FT 333 (380)
T ss_pred Ee
Confidence 93
No 55
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=99.21 E-value=1.8e-10 Score=113.96 Aligned_cols=155 Identities=13% Similarity=0.139 Sum_probs=102.2
Q ss_pred HHHHHHHHHhhHcCCcEEEec-CCCCCCCChhHHHHHHHHH-----HHHHHHH--hcCCCeEEEEecC--CHHHHHHHHc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHG-EVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVES 169 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHa-Ed~~~~~~~~~~E~~av~~-----~~~~~la--~~~~~~lhi~HvS--t~~sl~~i~~ 169 (329)
+.+.++++.+++.|.++.+|+ |+.. |...+.+ .+. .+. ...+.++++.|.+ +.+.++++++
T Consensus 199 ~~l~~~~~~a~~~g~~v~~H~~e~~~--------~~~~~~~~~g~~~~~-~l~~~g~~~~~~~l~H~~~~~~~~~~~~~~ 269 (445)
T PRK07228 199 ELLRGVRDLADEYGVRIHTHASENRG--------EIETVEEETGMRNIH-YLDEVGLTGEDLILAHCVWLDEEEREILAE 269 (445)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCHH--------HHHHHHHHhCCCHHH-HHHHCCCCCCCcEEEEEecCCHHHHHHHHH
Confidence 789999999999999999999 4331 2222211 010 122 2457789999998 8888998876
Q ss_pred ccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCc
Q 020186 170 CKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGI 249 (329)
Q Consensus 170 ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi 249 (329)
. .+..-+||+. .+. .+ .....+++.+..|... .++|||.|+.... .+ +
T Consensus 270 ~---g~~v~~~P~~------~~~---~~------------~~~~p~~~~~~~Gv~v-~lGtD~~~~~~~~--~~-----~ 317 (445)
T PRK07228 270 T---GTHVTHCPSS------NLK---LA------------SGIAPVPDLLERGINV-ALGADGAPCNNTL--DP-----F 317 (445)
T ss_pred c---CCeEEEChHH------hhh---cc------------cccCcHHHHHHCCCeE-EEcCCCCccCCCc--cH-----H
Confidence 4 4556689962 111 01 1123578889999998 9999997763211 01 0
Q ss_pred cchhHHHHHHHHHH-H---hcCCHHHHHHHHhhhhhhhcCC-CC-C------cccEEEEe
Q 020186 250 YNAPVALSLYAKVF-E---EMGALDKLEAFTSFNGPDFYGL-PR-N------TSKIKLTK 297 (329)
Q Consensus 250 ~~~e~~lpll~~~~-~---~~~~l~~~v~~~s~nPAkifgl-~~-~------dADlvi~~ 297 (329)
.+..+.+++... . ..+++++++++++.|||+.+|+ ++ | .|||+|+|
T Consensus 318 --~~~~~~~~~~~~~~~~~~~~s~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld 375 (445)
T PRK07228 318 --TEMRQAALIQKVDRLGPTAMPARTVFEMATLGGAKAAGFEDEIGSLEEGKKADLAILD 375 (445)
T ss_pred --HHHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHhCCCCCccccCCCCccCEEEEc
Confidence 123333333222 1 2579999999999999999999 32 3 79999994
No 56
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.19 E-value=4.5e-09 Score=103.42 Aligned_cols=224 Identities=13% Similarity=0.081 Sum_probs=136.0
Q ss_pred ccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEe--CC----CC--CHHHHHHHHhc-Cc
Q 020186 6 ILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYL--TD----TT--SPDEIKLARKT-GV 76 (329)
Q Consensus 6 ~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~--~~----~~--~~~el~~l~~~-G~ 76 (329)
.+.+|+.||||||+++|++.|.....+.++.+.+.+ ++.+ +|+.+.+...+ +. +. ..+++.++.+. |
T Consensus 28 ~~~~a~~~GvTtvv~~p~~~~~v~g~~~~~~~~~~a-~~~p--~~~~~~~p~~vp~t~~e~~g~~~~~~~i~~l~~~~~- 103 (422)
T cd01295 28 FAKAVLPHGTTTVIADPHEIANVAGVDGIEFMLEDA-KKTP--LDIFWMLPSCVPATPFETSGAELTAEDIKELLEHPE- 103 (422)
T ss_pred HHHHHHCCCcEEEEeCCCCCCcCCCHHHHHHHHHHH-hCCC--ceEEEeCCCcCCCCCCCCCCCcCCHHHHHHHhcCCC-
Confidence 356789999999999999999999999998877754 3334 78754432100 11 01 36788888774 7
Q ss_pred eeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEE
Q 020186 77 VFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVME 156 (329)
Q Consensus 77 v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~ 156 (329)
+.++|-+|.+. +....+ ..+.+.++.+++.|.++.+||-... ...+.+.+ + .|.. -.
T Consensus 104 vvglgE~md~~----~v~~~~--~~l~~~i~~A~~~g~~v~~Ha~g~~---------~~~L~a~l----~--aGi~--~d 160 (422)
T cd01295 104 VVGLGEVMDFP----GVIEGD--DEMLAKIQAAKKAGKPVDGHAPGLS---------GEELNAYM----A--AGIS--TD 160 (422)
T ss_pred CcEEEEeccCc----cccCCc--HHHHHHHHHHHhCCCEEEEeCCCCC---------HHHHHHHH----H--cCCC--CC
Confidence 56999888642 111233 7889999999999999999996432 12233322 2 2322 13
Q ss_pred ecC--CHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHH--cCCCCeEEecCC
Q 020186 157 HIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVT--SGSRKFFLGTDS 232 (329)
Q Consensus 157 HvS--t~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~--~G~Id~~i~SDH 232 (329)
|-+ ..+.++.++ ..++..+.+-. ...+.+.+.+.+. .|.-- +++||.
T Consensus 161 H~~~~~eea~e~l~----~G~~i~i~~g~------------------------~~~~~~~~~~~l~~~~~~~i-~l~TD~ 211 (422)
T cd01295 161 HEAMTGEEALEKLR----LGMYVMLREGS------------------------IAKNLEALLPAITEKNFRRF-MFCTDD 211 (422)
T ss_pred cCCCcHHHHHHHHH----CCCEEEEECcc------------------------cHhhHHHHHHhhhhccCCeE-EEEcCC
Confidence 443 555555553 22232221111 0233444555554 24554 899996
Q ss_pred CCCCcCcccccCCcCCccchhHHHHHHHHH-HHhcCCHHHHHHHHhhhhhhhcCCC-CC------cccEEEEe
Q 020186 233 APHERGRKECACGCAGIYNAPVALSLYAKV-FEEMGALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTK 297 (329)
Q Consensus 233 aPh~~~eK~~~~~~~Gi~~~e~~lpll~~~-~~~~~~l~~~v~~~s~nPAkifgl~-~~------dADlvi~~ 297 (329)
|+... ....| .+..+... ....++++++++..+.|||++||++ .| .|||++++
T Consensus 212 -~~~~~-----~~~~g------~~~~v~r~a~~~g~s~~eal~~aT~n~A~~~gl~~~G~i~~G~~AD~vv~~ 272 (422)
T cd01295 212 -VHPDD-----LLSEG------HLDYIVRRAIEAGIPPEDAIQMATINPAECYGLHDLGAIAPGRIADIVILD 272 (422)
T ss_pred -CCchh-----hhhcc------hHHHHHHHHHHcCCCHHHHHHHHhHHHHHHcCCCCCcccCCCCcCCEEEEC
Confidence 43110 00012 12222222 2346799999999999999999984 23 69999994
No 57
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=99.19 E-value=2.8e-10 Score=114.19 Aligned_cols=138 Identities=14% Similarity=0.109 Sum_probs=94.2
Q ss_pred cchhcccCccEEEE-----CCCCCCCCCcHHHHHH--HHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeE
Q 020186 7 LPICSVSHYGRAIV-----MPNLKPPITTTAAAVA--YRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFA 79 (329)
Q Consensus 7 ~~~Aa~GGvTtvid-----mPnt~p~~~~~~~l~~--~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~ 79 (329)
..+|++||+||+++ |||+.|...+...+.. +.+.+ +... +||++++. +.....+++.++.++|+ .+
T Consensus 143 ~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~aa-~~~~--in~g~~g~---g~~~~~~~L~e~i~aGa-~g 215 (567)
T TIGR01792 143 VQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQAA-DGLP--INFGFTGK---GSGSGPAALIEQIEAGA-CG 215 (567)
T ss_pred HHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHHh-ccCC--ccEEEEeC---CccchHHHHHHHHHcCC-cE
Confidence 46899999999999 7888887766554422 23333 2333 89888753 22335677888888895 69
Q ss_pred EEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Q 020186 80 VKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT 159 (329)
Q Consensus 80 ~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvS 159 (329)
||+|..| ..++ +.|++++++++++|.++.+|+|... |.-.+.. .++++.+.|+|++|.-
T Consensus 216 fK~h~~y-------~~s~--e~L~~al~~A~e~gv~V~iH~ET~~--------E~g~ve~----t~~a~g~rpIh~~H~~ 274 (567)
T TIGR01792 216 LKVHEDW-------GATP--AAIDNALSVADEYDVQVAVHTDTLN--------ESGFVED----TIAAFKGRTIHTYHTE 274 (567)
T ss_pred EEeCCCC-------CCCH--HHHHHHHHHHHHcCCEEEEeCCCcc--------cchHHHH----HHHHHCCCcchhHhhc
Confidence 9998643 2233 7899999999999999999997543 2112222 2456678999999986
Q ss_pred C---HHHHHHHHcccC
Q 020186 160 T---MDAVKFVESCKE 172 (329)
Q Consensus 160 t---~~sl~~i~~ak~ 172 (329)
. ..+=++|+-+..
T Consensus 275 G~g~ghapdi~~~~~~ 290 (567)
T TIGR01792 275 GAGGGHAPDIIVVVGY 290 (567)
T ss_pred CCCCCcHHHHHHHcCC
Confidence 4 445566665543
No 58
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.18 E-value=8.6e-11 Score=107.54 Aligned_cols=244 Identities=13% Similarity=0.041 Sum_probs=133.5
Q ss_pred ccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEeec
Q 020186 6 ILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPA 85 (329)
Q Consensus 6 ~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f~~ 85 (329)
...+++.+|+||+++++++.+.. +..... . . ..+..+... ........+..+.+.......++.+.
T Consensus 36 ~~~~~~~~G~tt~~~~~~~~~~~-----~~~~~~---~--~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (304)
T PF13147_consen 36 ASAAALAGGVTTVVDMPGTNPEE-----LNRARR---R--G--AGYPGSGAG--PRGTTIEELEALVDLIAAEGVGFVAA 101 (304)
T ss_dssp HHHHHHHTTEEEEEESSSSSHHH-----HHHHHH---H--E--SEEEEECES--CCHHHHHHHHHHHHHHHHTEEEEESS
T ss_pred HHHHHHhCCEeEEecCCCCCchh-----hHHHHh---h--c--ccccccccc--ccccchHHHHHHHHHHhhcCcceeec
Confidence 45677899999999988666431 111111 1 1 223322221 11112233333333211113344432
Q ss_pred cccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCC--------------hhHHHHHHHHHHHHHHHHhcCCC
Q 020186 86 GATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD--------------IFDREKVFIDTILQPLIQRLPQL 151 (329)
Q Consensus 86 ~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~--------------~~~~E~~av~~~~~~~la~~~~~ 151 (329)
+. .. +. ..+.+.++...+.+....++.++...... ....+...+.. .+....+.
T Consensus 102 ~~------~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 169 (304)
T PF13147_consen 102 YN------GI-EG-PGLQAAIRAAHRAGVIKVVGHSPADGIEGAIAEGLDAMEHILPHEVAEALHLAE----ALAQGAGP 169 (304)
T ss_dssp ST------HH-HH-HHHHHHHHHHHHHTHEEEEEECHHHHHHHHHHHHHHTTHHSTHHHHHHHHHHHH----HHHHHHTH
T ss_pred cc------cC-CH-HHHHHHHHHHHhcCCeeeecccchhhHHHHHHhcccchhhhhhhhHHHHHHHHH----Hhhhcccc
Confidence 10 11 22 66778888888888444444333221000 00112222221 34555577
Q ss_pred eEEEEecCCHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCC--ChhhHHHHHHHHHcCCCCeEEe
Q 020186 152 KVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLK--REIHRQAVVSAVTSGSRKFFLG 229 (329)
Q Consensus 152 ~lhi~HvSt~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR--~~~dr~aLw~al~~G~Id~~i~ 229 (329)
.+++.+.+.....+.+...+...+....+. ++.+.... .+..++++||++ ...++..+++++++|.+. +++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~l~~~Gv~~-~l~ 242 (304)
T PF13147_consen 170 GLHCHVASDDATAEGVAIAHGFGLPPTPLH--LLARDAAA----AGIRFKVLPPLRLDLREDRAALRELLEAGVPV-ALG 242 (304)
T ss_dssp CEEEEETSSHHHHHHHHHHHHTTHEEEEEE--HHHHHHHH----HGGGGEESSCHHHHTHHHHHHHHHHHHTTSSE-EEE
T ss_pred chhhhhhhhhhhhHHHHHHHhhccccchHH--hhHHHHHh----cCceeeeCCCccccchhhhHHHHHHHhCCCeE-EEE
Confidence 777777777766532211111122222222 22222111 146899999999 999999999999999998 999
Q ss_pred cCCCCCCcCcccccCCcCCccchhHHHHHHHHHH-HhcCCHHHHHHHHhhhhhhhcCC-CC-C------cccEE
Q 020186 230 TDSAPHERGRKECACGCAGIYNAPVALSLYAKVF-EEMGALDKLEAFTSFNGPDFYGL-PR-N------TSKIK 294 (329)
Q Consensus 230 SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~-~~~~~l~~~v~~~s~nPAkifgl-~~-~------dADlv 294 (329)
|||.|++.+ +-...+..+...+ ...++++++++.+|.||||+||+ ++ | +||||
T Consensus 243 sD~~~~~~~------------~~~~~~~~~~~~~~~~gl~~~~al~~~T~~pA~~lgl~~~~G~i~~G~~ADlv 304 (304)
T PF13147_consen 243 SDHAPSSTE------------GSGDLLHEAMRLAVRAGLSPEEALRAATSNPARILGLDDDKGSIAPGKDADLV 304 (304)
T ss_dssp E-BBTTTTT------------CTTTHHHHHHHHHHHTSSTHHHHHHHHTHHHHHHTTBTTTSSSTSTTSB-EEE
T ss_pred cCCcccccc------------cccccchhhhhHHhhcCCCHHHHHHHHHHHHHHHhCCCCCCccCCCCCCCCcC
Confidence 999998654 1112444444333 35889999999999999999998 43 3 79986
No 59
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=99.06 E-value=2.2e-08 Score=97.37 Aligned_cols=247 Identities=10% Similarity=0.065 Sum_probs=134.8
Q ss_pred cchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCcc-EEEEEE-----EEeCCCCCHHHHHHHHhcCceeEE
Q 020186 7 LPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSN-FTPLMT-----LYLTDTTSPDEIKLARKTGVVFAV 80 (329)
Q Consensus 7 ~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd-~~~~~~-----~~~~~~~~~~el~~l~~~G~v~~~ 80 (329)
+..+...|||||++|-.+..-....+.+..+.+.+++.. +. |...+. .|++ +....++.. .+ .+.|+
T Consensus 83 ~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~G---ir~~~~~g~~~~p~~t~t-~~~~~d~~~-~d--~iiG~ 155 (389)
T TIGR01975 83 LSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEG---ISCYMLTGAYHVPSRTIT-GSVESDLLL-ID--KVIGV 155 (389)
T ss_pred HHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhC---CEEEEEcccccCCCcccc-cchhhheee-eh--hhccc
Confidence 445688999999999765544445554444444443322 22 111111 0112 222223322 12 24577
Q ss_pred E-EeeccccccCCCCccChHHHHHHHHHHhhHcC----Cc--EEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeE
Q 020186 81 K-LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQN----MP--LLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKV 153 (329)
Q Consensus 81 K-~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~----~~--v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~l 153 (329)
| +=+....+ .-... +.|.++.+.++..| ++ ++||-.|... .+..++ .+.+.++.|.
T Consensus 156 ~~ia~sd~r~----~~~~~-~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~~~----------~l~~l~--~~~~~~di~~ 218 (389)
T TIGR01975 156 GEIAISDHRS----AQPTV-EHLTNMAAEARVGGLLGGKPGIVNFHVGDSKR----------ALQPIY--ELVENTDVPI 218 (389)
T ss_pred ceEEEccCcC----CCCCH-HHHHHHHHHHHHHHHhcCCCcEEEEEeCCchh----------hHHHHH--HHHHhcCCCh
Confidence 4 76543211 11223 66777777777777 67 9999998742 233344 4566677765
Q ss_pred EEE---ecC-C----HHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCC-C
Q 020186 154 VME---HIT-T----MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS-R 224 (329)
Q Consensus 154 hi~---HvS-t----~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~-I 224 (329)
|.- |+. + .++++.+++.-...+++..+|.+|- .+ +....+.+-.++..|. +
T Consensus 219 ~~f~pth~~r~~~l~~~~i~~~~~gg~iDv~~~~~~~~l~-----------------~~---~~~~~~~~~~~~~~Gv~~ 278 (389)
T TIGR01975 219 TQFLPTHINRNVPLFEAGLEFAKKGGTIDLTSSIDPQFRK-----------------EG---EVAPAEGIKKALEAGVPL 278 (389)
T ss_pred hheecCccCCCHHHHHHHHHHHHhCCcEEEeCCCCccchh-----------------cc---ccChHHHHHHHHHcCCCc
Confidence 554 444 3 2333333322103344333332221 00 1123345666777785 3
Q ss_pred C-eEEecCCC---CCCcCcccccCCcCCccchhHHHHHHHHHHHh-cCCHHHHHHHHhhhhhhhcCCC-CC------ccc
Q 020186 225 K-FFLGTDSA---PHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLP-RN------TSK 292 (329)
Q Consensus 225 d-~~i~SDHa---Ph~~~eK~~~~~~~Gi~~~e~~lpll~~~~~~-~~~l~~~v~~~s~nPAkifgl~-~~------dAD 292 (329)
| ++++||+. |+..++. ..-..|+.+.+.++..+...+.. +++++++++.++.|||+++|++ .| +||
T Consensus 279 ~~i~isSD~~gs~p~~~~~g--~~~~~g~g~~~sl~~~~~~lv~~g~ls~~eal~~~T~npA~~Lgl~~~G~I~~G~~AD 356 (389)
T TIGR01975 279 EKVTFSSDGNGSQPFFDENG--ELTGLGVGSFETLFEEVREAVKDGDVPLEKALRVITSNVAGVLNLTGKGEISPGNDAD 356 (389)
T ss_pred ceEEEEeCCCCCCCcccccc--ccccCCcCcHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhCCCCCCeECCCCcCC
Confidence 2 36899974 3332211 11234777777777766554443 6899999999999999999995 23 799
Q ss_pred EEEEecc
Q 020186 293 IKLTKIP 299 (329)
Q Consensus 293 lvi~~~~ 299 (329)
|+|+|..
T Consensus 357 lvild~~ 363 (389)
T TIGR01975 357 LVVLDPD 363 (389)
T ss_pred EEEEcCC
Confidence 9999543
No 60
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.05 E-value=8.3e-08 Score=91.06 Aligned_cols=251 Identities=13% Similarity=0.040 Sum_probs=138.1
Q ss_pred hhcccCccEEEECCC---CCCCCCcHHHHHHHHHHHHhhC--CC-CccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEE
Q 020186 9 ICSVSHYGRAIVMPN---LKPPITTTAAAVAYRESILKAL--PA-SSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKL 82 (329)
Q Consensus 9 ~Aa~GGvTtvidmPn---t~p~~~~~~~l~~~~~~~~~~~--~~-~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~ 82 (329)
..++.||||+++=-. ..+.....+..+...+.+.... .. .+|-.+|.-.-+...+..+++..+.+.+.+ .+=.
T Consensus 36 ~~~a~GiTT~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~hlR~E~~~~~~~~~~~~~~~~~~v-~lvs 114 (325)
T cd01306 36 QLAAAGITTVFDALSFGDEEGGRRRLRNLRKLIDAIRELHARGVLRADHRLHLRCELADPAVLPELESLMADPRV-HLVS 114 (325)
T ss_pred HHHhcCcccceeeeEeccccCCcccHHHHHHHHHHHHHhhhCCcchhhcceEEEEeecCccHHHHHHHHhcCCCc-CEEE
Confidence 357789999998742 1222234555555554443321 11 167777765423334557778888877644 5556
Q ss_pred eeccccccCCCCccChHHHHHHHHHHh-hHcCCcEEEecCCCCCCCCh--hHHH--HHHHHHHHHHHHHhcCCCeEEEEe
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEM-VEQNMPLLVHGEVTDPIVDI--FDRE--KVFIDTILQPLIQRLPQLKVVMEH 157 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~-~~~~~~v~vHaEd~~~~~~~--~~~E--~~av~~~~~~~la~~~~~~lhi~H 157 (329)
||.. +++.....| +.+.-+|. ++.|.- ..|-..++... ...+ .+.+.+++ ..|+..|.|+ ..|
T Consensus 115 ~~dH--~pg~~q~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~iv--~~A~~~gl~v-asH 182 (325)
T cd01306 115 LMDH--TPGQRQFRD----LEKYREYYAKKYGLS---DEEVEEAILERKARAAAYAPANRSELA--ALARARGIPL-ASH 182 (325)
T ss_pred EeCC--CCccccccC----HHHHHHHHHhhcCCC---HHHHHHHHHHHHHHhhhcCHHHHHHHH--HHHHHCCCcE-EEe
Confidence 7753 222222334 22233333 222221 11100000000 0011 13355555 6788889987 457
Q ss_pred cC-CHHHHHHHHcccCCceEEEecchhhhcchhhhcC-CCCCCceEEcCC--CCChh--hHHHHHHHHHcCCCCeEEecC
Q 020186 158 IT-TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQ-GGLRPHNYCLPV--LKREI--HRQAVVSAVTSGSRKFFLGTD 231 (329)
Q Consensus 158 vS-t~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~-~~~~~~~k~~PP--LR~~~--dr~aLw~al~~G~Id~~i~SD 231 (329)
.. +.+.++...+. .-..+| |+ .+.+.... ...|....+.+| +|... ....+++++..|.+| +++||
T Consensus 183 ~d~~~~~v~~a~~~--Gv~~~E----~p-~t~e~a~~a~~~G~~vv~gapn~lrg~s~~g~~~~~~ll~~Gv~~-al~SD 254 (325)
T cd01306 183 DDDTPEHVAEAHEL--GVVISE----FP-TTLEAAKAARELGLQTLMGAPNVVRGGSHSGNVSARELAAHGLLD-ILSSD 254 (325)
T ss_pred cCCChHHHHHHHHC--CCeecc----CC-CCHHHHHHHHHCCCEEEecCcccccCccccccHhHHHHHHCCCeE-EEEcC
Confidence 74 56666655543 223344 12 22222110 023556666666 55433 345789999999999 99999
Q ss_pred CCCCCcCcccccCCcCCccchhHHHHHHHHHHH-hcCCHHHHHHHHhhhhhhhcCCC-CC------cccEEEEec
Q 020186 232 SAPHERGRKECACGCAGIYNAPVALSLYAKVFE-EMGALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTKI 298 (329)
Q Consensus 232 HaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~~-~~~~l~~~v~~~s~nPAkifgl~-~~------dADlvi~~~ 298 (329)
|.|.+ .+...+.... ..+++++++++.|.|||+++|++ +| .|||++|+.
T Consensus 255 ~~p~s------------------ll~~~~~la~~~gl~l~eAl~~aT~nPA~~lGl~d~G~I~~G~~ADlvvvd~ 311 (325)
T cd01306 255 YVPAS------------------LLHAAFRLADLGGWSLPEAVALVSANPARAVGLTDRGSIAPGKRADLILVDD 311 (325)
T ss_pred CCcHh------------------HHHHHHHHHHHcCCCHHHHHHHHhHHHHHHcCCCCCCCcCCCCCCCEEEEeC
Confidence 97642 2333333332 36899999999999999999994 34 699999953
No 61
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.05 E-value=1e-08 Score=97.72 Aligned_cols=188 Identities=13% Similarity=0.130 Sum_probs=107.1
Q ss_pred HHHHHHHHhcCceeEEEEeeccccccCC-----CCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHH
Q 020186 65 PDEIKLARKTGVVFAVKLYPAGATTNSQ-----DGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT 139 (329)
Q Consensus 65 ~~el~~l~~~G~v~~~K~f~~~~~~~~~-----~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~ 139 (329)
..++.++.+.| +..+|+|+.+...... ..++ . +.+.++++.+++.|.++.+|++... .+..
T Consensus 123 ~~~v~~~~~~G-~~~iK~~~~g~~~~~~~~~~~~~~~-~-e~l~~~~~~A~~~g~~v~~H~~~~~-----------~i~~ 188 (342)
T cd01299 123 RAAVREQLRRG-ADQIKIMATGGVLSPGDPPPDTQFS-E-EELRAIVDEAHKAGLYVAAHAYGAE-----------AIRR 188 (342)
T ss_pred HHHHHHHHHhC-CCEEEEeccCCcCCCCCCCcccCcC-H-HHHHHHHHHHHHcCCEEEEEeCCHH-----------HHHH
Confidence 34677888888 4699999865321110 1233 3 7899999999999999999998531 2322
Q ss_pred HHHHHHHhcCCCeEEEEecC--CHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCC-------hh
Q 020186 140 ILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR-------EI 210 (329)
Q Consensus 140 ~~~~~la~~~~~~lhi~HvS--t~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~-------~~ 210 (329)
.+ ..|.. -|.|.. +.+.++.+++ ..++...||............ .-.|+-.. ..
T Consensus 189 ~l------~~G~~-~i~H~~~~~~~~~~~l~~---~g~~~~~t~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 251 (342)
T cd01299 189 AI------RAGVD-TIEHGFLIDDETIELMKE---KGIFLVPTLATYEALAAEGAA-------PGLPADSAEKVALVLEA 251 (342)
T ss_pred HH------HcCCC-EEeecCCCCHHHHHHHHH---CCcEEeCcHHHHHHHHhhccc-------cCCCHHHHHHHHHHHHH
Confidence 22 12443 366765 5666777664 456777887643211001000 00111000 01
Q ss_pred hHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHHHHHhcCCHHHHHHHHhhhhhhhcCCC-C-
Q 020186 211 HRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP-R- 288 (329)
Q Consensus 211 dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~~~~~~l~~~v~~~s~nPAkifgl~-~- 288 (329)
....+-+....|.- ++++||... . ..+|..-. .- +.......++..++++..+.|||+++|+. +
T Consensus 252 ~~~~~~~l~~~Gv~-v~~GTD~~~-~--------~~~~~~~~---~e-~~~~~~~~~~~~~al~~~T~~~a~~~g~~~~~ 317 (342)
T cd01299 252 GRDALRRAHKAGVK-IAFGTDAGF-P--------VPPHGWNA---RE-LELLVKAGGTPAEALRAATANAAELLGLSDEL 317 (342)
T ss_pred HHHHHHHHHHcCCe-EEEecCCCC-C--------CCchhHHH---HH-HHHHHHhCCCHHHHHHHHHHHHHHHhCccCCc
Confidence 12233345556754 489999642 0 01121111 00 11112336799999999999999999983 2
Q ss_pred C------cccEEEEe
Q 020186 289 N------TSKIKLTK 297 (329)
Q Consensus 289 ~------dADlvi~~ 297 (329)
| .|||+|++
T Consensus 318 G~i~~G~~ADlvvl~ 332 (342)
T cd01299 318 GVIEAGKLADLLVVD 332 (342)
T ss_pred ceECCCCcCCEEEEC
Confidence 3 69999994
No 62
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria.
Probab=99.04 E-value=1.8e-10 Score=93.18 Aligned_cols=72 Identities=13% Similarity=0.120 Sum_probs=62.2
Q ss_pred cccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCC-------------C--h-hHHHHHHHHHHHHHHHHhcCCC
Q 020186 88 TTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-------------D--I-FDREKVFIDTILQPLIQRLPQL 151 (329)
Q Consensus 88 ~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~-------------~--~-~~~E~~av~~~~~~~la~~~~~ 151 (329)
|++++.++... ..++++|++ ++++.++..||||+++.. + + -.+|...+.|.+ .||+.+||
T Consensus 55 fsddg~giq~~-~lm~eamk~-a~l~~~i~ahceDd~l~~~g~v~~ge~~q~~g~~L~G~cEs~~~~rd~--lLak~~g~ 130 (142)
T PF12890_consen 55 FSDDGYGIQIQ-LLMYEAMKK-AELDQEIVAHCEDDELTNGGVVHDGELPQFLGVYLKGNCESVQCARDV--LLAKATGC 130 (142)
T ss_pred EecCCceeeeH-HHHHHHHHH-HHcccHHHHhhcccccccccccccchhhHHhCCcCCCcchHHHHHHHH--HhhhccCC
Confidence 57788888887 899999999 899999999999997652 1 1 268999999998 99999999
Q ss_pred eEEEEecCCHHH
Q 020186 152 KVVMEHITTMDA 163 (329)
Q Consensus 152 ~lhi~HvSt~~s 163 (329)
..|||||||+++
T Consensus 131 ~yhVchvstkes 142 (142)
T PF12890_consen 131 HYHVCHVSTKES 142 (142)
T ss_pred cEEEEEEeccCC
Confidence 999999999864
No 63
>PLN02303 urease
Probab=99.01 E-value=2.1e-09 Score=110.87 Aligned_cols=99 Identities=17% Similarity=0.134 Sum_probs=71.0
Q ss_pred hhcccCccEEEEC-----CCCCCCCC--cHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEE
Q 020186 9 ICSVSHYGRAIVM-----PNLKPPIT--TTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVK 81 (329)
Q Consensus 9 ~Aa~GGvTtvidm-----Pnt~p~~~--~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K 81 (329)
.++++|+||++++ |||.|++. +++.++.+.+.++ ... +||++++. +...+++++.++.++|+ .+||
T Consensus 415 eaLasGVTTai~GGtgp~pnT~ptt~t~g~e~I~~~L~aa~-~~p--vn~Gf~gk---G~~s~l~eL~elieaGa-~GfK 487 (837)
T PLN02303 415 EAIASGITTLVGGGTGPAHGTCATTCTPAPSHMKLMLQSTD-DLP--LNFGFTGK---GNTAKPEGLHEIIKAGA-MGLK 487 (837)
T ss_pred HHHHHhHHHHHhcCCCCCCcccCcCCCCCHHHHHHHHHhcc-cCC--CcEEEEcc---CcccCHHHHHHHHHcCc-EEEE
Confidence 4445555555554 67788774 5787877766433 334 89998864 32356889999998995 5999
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCC
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVT 123 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~ 123 (329)
.+..+ .+++ ..+.+++++++++|.++++|||+-
T Consensus 488 ~h~d~-------gvTp--elL~raLe~AkelGVpVaIHAEdL 520 (837)
T PLN02303 488 LHEDW-------GTTP--AAIDNCLDVAEEYDIQVTIHTDTL 520 (837)
T ss_pred ECCCC-------CCCH--HHHHHHHHHHHHcCCEEEEecCcc
Confidence 87422 2333 789999999999999999999983
No 64
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=99.01 E-value=2.4e-08 Score=99.72 Aligned_cols=167 Identities=14% Similarity=0.069 Sum_probs=101.4
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHH-HHHHHHHHHHHHhcCCCeEEEEecC--CHHHHHHHHcccCCceE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREK-VFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVA 176 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~-~av~~~~~~~la~~~~~~lhi~HvS--t~~sl~~i~~ak~~~vt 176 (329)
+.+.++++.+++.|.++.+|+..... .... .++.+.. ...-..+.+..|.|.+ +.+.++.+++ ..+.
T Consensus 295 e~l~~~~~~a~~~g~~v~~Ha~gd~~-----i~~~l~~~~~~~--~~~g~~~~r~~i~H~~~~~~~~~~~l~~---~gv~ 364 (479)
T cd01300 295 EELEELVRAADEAGLQVAIHAIGDRA-----VDTVLDALEAAL--KDNPRADHRHRIEHAQLVSPDDIPRFAK---LGVI 364 (479)
T ss_pred HHHHHHHHHHHHCCCCEEEEEecHHH-----HHHHHHHHHHHH--HhcCCCCCCceeeecccCCHHHHHHHHH---cCCc
Confidence 88999999999999999999985421 0000 1111111 0111236788999988 4556665554 5688
Q ss_pred EEecchhhhcchhhhcCCCCC-CceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHH
Q 020186 177 ATVTPQHLVLNRNALFQGGLR-PHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVA 255 (329)
Q Consensus 177 ~Et~phhL~l~~~~~~~~~~~-~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~ 255 (329)
+++||+|+.+..+.......+ ...+..||+| +.+..|... +++|||.+.. .. ++ .+++..
T Consensus 365 ~~~~P~~~~~~~~~~~~~~lg~~~~~~~~p~~---------~~~~~Gv~v-~lGSD~~~~~-~~---p~-----~~~~~a 425 (479)
T cd01300 365 ASVQPNHLYSDGDAAEDRRLGEERAKRSYPFR---------SLLDAGVPV-ALGSDAPVAP-PD---PL-----LGIWAA 425 (479)
T ss_pred eEeCcccccCchHHHHHhcccHHHHhcCchHH---------HHHHCCCee-eccCCCCCCC-CC---HH-----HHHHHH
Confidence 999999988765443210012 2345566655 456778887 9999994332 11 10 111111
Q ss_pred HHHH-HH-----HHHhcCCHHHHHHHHhhhhhhhcCCC-C-C------cccEEE
Q 020186 256 LSLY-AK-----VFEEMGALDKLEAFTSFNGPDFYGLP-R-N------TSKIKL 295 (329)
Q Consensus 256 lpll-~~-----~~~~~~~l~~~v~~~s~nPAkifgl~-~-~------dADlvi 295 (329)
+... .. ...++++++++++..+.|||+.+|+. + | .|||+|
T Consensus 426 v~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe~Gk~ADlvv 479 (479)
T cd01300 426 VTRKTPGGGVLGNPEERLSLEEALRAYTIGAAYAIGEEDEKGSLEPGKLADFVV 479 (479)
T ss_pred heeeCCCCCCCCCccccCCHHHHHHHHHHHHHHHhccccccccccCCcccceeC
Confidence 1000 00 01236799999999999999999983 2 3 699975
No 65
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=98.73 E-value=3.7e-06 Score=81.12 Aligned_cols=42 Identities=10% Similarity=0.124 Sum_probs=32.4
Q ss_pred HHHHHH-HHHhcCCHHHHHHHHhhhhhhhcCCCC-C------cccEEEEe
Q 020186 256 LSLYAK-VFEEMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK 297 (329)
Q Consensus 256 lpll~~-~~~~~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi~~ 297 (329)
++..+. .....++++++++.++.||||+||+++ | +|||++|+
T Consensus 281 l~~~~~~~~~~g~~~~ea~~~~t~npa~~~gl~~~g~i~~g~~ad~~~~~ 330 (365)
T TIGR03583 281 LATVMSKFLALGYSLEEVIEKVTKNAAEILKLTQKGRLQEGYDADLTIFT 330 (365)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCCcCCCCcccEEEEe
Confidence 444443 233468999999999999999999963 4 69999984
No 66
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=98.70 E-value=2.4e-06 Score=82.37 Aligned_cols=159 Identities=14% Similarity=0.136 Sum_probs=99.8
Q ss_pred eeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCe--EE
Q 020186 77 VFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK--VV 154 (329)
Q Consensus 77 v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~--lh 154 (329)
+.+.|++.... ..+. +.+.++++.+++.|.++.+|+...... + .+.... ..|.. .|
T Consensus 178 ~~~~~~~~~~~-------~~~~-~~~~~~~~~A~~~g~~v~~H~~e~~~~-~-------~~~~~~------~~g~~~i~H 235 (371)
T cd01296 178 ADFCDVFCEKG-------AFSL-EQSRRILEAAKEAGLPVKIHADELSNI-G-------GAELAA------ELGALSADH 235 (371)
T ss_pred CCEEEEeecCC-------ccCH-HHHHHHHHHHHHCCCeEEEEEcCcCCC-C-------HHHHHH------HcCCCeeHH
Confidence 45778874321 1223 788999999999999999999754211 0 111111 12322 25
Q ss_pred EEecCCHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCC
Q 020186 155 MEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAP 234 (329)
Q Consensus 155 i~HvSt~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaP 234 (329)
.+|+ +.+.++.+++ ..+.+.+||...+. +. .+ .||+ .+.+..|... +++|||.|
T Consensus 236 ~~~~-~~~~i~~la~---~g~~v~~~P~~~~~----l~---~~-----~~~~---------~~l~~~Gv~v-~lgsD~~p 289 (371)
T cd01296 236 LEHT-SDEGIAALAE---AGTVAVLLPGTAFS----LR---ET-----YPPA---------RKLIDAGVPV-ALGTDFNP 289 (371)
T ss_pred hcCC-CHHHHHHHHH---cCCeEEEChHHHHH----hC---CC-----CCCH---------HHHHHCCCcE-EEecCCCC
Confidence 5555 4666776665 46778889975432 11 11 4554 3567789987 99999966
Q ss_pred CCcCcccccCCcCCccchhHHHHHHHH-HH-HhcCCHHHHHHHHhhhhhhhcCCC-C-C------cccEEEEe
Q 020186 235 HERGRKECACGCAGIYNAPVALSLYAK-VF-EEMGALDKLEAFTSFNGPDFYGLP-R-N------TSKIKLTK 297 (329)
Q Consensus 235 h~~~eK~~~~~~~Gi~~~e~~lpll~~-~~-~~~~~l~~~v~~~s~nPAkifgl~-~-~------dADlvi~~ 297 (329)
+.. +. ..++..+. .. ..+++++++++..+.|||+++|+. + | +|||+|+|
T Consensus 290 ~~~----------~~----~~l~~~~~~~~~~~~l~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d 348 (371)
T cd01296 290 GSS----------PT----SSMPLVMHLACRLMRMTPEEALTAATINAAAALGLGETVGSLEVGKQADLVILD 348 (371)
T ss_pred CCC----------hH----HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCCcCEEEEC
Confidence 531 10 11322222 22 247899999999999999999994 2 3 79999994
No 67
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=98.54 E-value=1.4e-05 Score=80.16 Aligned_cols=44 Identities=16% Similarity=0.128 Sum_probs=34.5
Q ss_pred cCCHHHHHHHHhhhhhhhcCCC-CC------cccEEEEe-cceeecCCccCc
Q 020186 266 MGALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTK-IPWKVPEAFSFS 309 (329)
Q Consensus 266 ~~~l~~~v~~~s~nPAkifgl~-~~------dADlvi~~-~~~~v~~~~~~s 309 (329)
.++++++++++|.||||+||++ +| +|||+||| .+.+++.+++.+
T Consensus 426 eLSLeei~~mtT~nPAKiLGL~~kG~L~~G~~ADLvIfD~n~~~v~~~dl~s 477 (541)
T cd01304 426 EYSLYEIAIMTRAGPAKLLGLSDKGHLGVGADADIAIYDDDPDQVDPSDYEK 477 (541)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCCccCCCCcCCEEEEeCCcCccCchhhcC
Confidence 4589999999999999999994 34 79999995 333676655544
No 68
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=98.51 E-value=1.8e-06 Score=83.71 Aligned_cols=243 Identities=13% Similarity=0.112 Sum_probs=127.0
Q ss_pred cccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhC-CCCccEEEEEE-EEeCC---CC---------CHHHHHH
Q 020186 5 TILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL-PASSNFTPLMT-LYLTD---TT---------SPDEIKL 70 (329)
Q Consensus 5 ~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~-~~~vd~~~~~~-~~~~~---~~---------~~~el~~ 70 (329)
+++.+++++||||+++|++|.|+....+.+..+.+..++.. . ..|++|.. .+++. +. ..+++.+
T Consensus 76 ~~~~~~~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~g~--~~~g~hleGP~~~~~~~g~h~~~~~~~~~~~~~~~ 153 (374)
T cd00854 76 TIAEALAKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQGA--EILGIHLEGPFISPEKKGAHPPEYLRAPDPEELKK 153 (374)
T ss_pred HHHHHHHccCcceeeccccCCCHHHHHHHHHHHHHHhhcCCCC--eeEEEeeecCccCcccCCCCCHHHcCCcCHHHHHH
Confidence 45678999999999999999987776676776666554321 2 45666543 12211 11 2346677
Q ss_pred HHhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEE-EecCCCCCCCChhHHHHHHHHHHHHHHHHhcC
Q 020186 71 ARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLL-VHGEVTDPIVDIFDREKVFIDTILQPLIQRLP 149 (329)
Q Consensus 71 l~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~-vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~ 149 (329)
+.+.+. -.+|+++- ... ... -.++++.+++.|+++. -|.-.. ...+. -|...
T Consensus 154 ~~~~~~-~~ik~~tl---aPE---~~~----~~~~i~~~~~~gi~v~~GH~~a~----------~~~~~------~a~~~ 206 (374)
T cd00854 154 WLEAAG-GLIKLVTL---APE---LDG----ALELIRYLVERGIIVSIGHSDAT----------YEQAV------AAFEA 206 (374)
T ss_pred HHHhcC-CCEEEEEE---CCC---CCC----hHHHHHHHHHCCeEEEeeCCcCC----------HHHHH------HHHHc
Confidence 766542 24677631 110 111 2467778888888884 676422 01121 12233
Q ss_pred CCeEEEEecCCHHHHHHHHcccC----------CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHH
Q 020186 150 QLKVVMEHITTMDAVKFVESCKE----------GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAV 219 (329)
Q Consensus 150 ~~~lhi~HvSt~~sl~~i~~ak~----------~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al 219 (329)
|.+. +.|.-..-+-. ..|+ ..++||...|-.. + +.++...+++..
T Consensus 207 G~~~-~tH~~n~m~~~---~~r~~~~~~a~l~~~~~~~~li~dg~H----------------v-----~~~~~~~~~r~~ 261 (374)
T cd00854 207 GATH-VTHLFNAMSPL---HHREPGVVGAALSDDDVYAELIADGIH----------------V-----HPAAVRLAYRAK 261 (374)
T ss_pred CCCe-eeECCCCCCCc---CCCCCcHHHHhhcCCCCeEEEEcCCCc----------------C-----CHHHHHHHHHhc
Confidence 5553 77764321100 0011 1234443332221 2 234555566654
Q ss_pred HcCCCCeEEecCCCCCC--------cCcc-----ccc--CCcCCccchhHHHHHHHH-HHH-hcCCHHHHHHHHhhhhhh
Q 020186 220 TSGSRKFFLGTDSAPHE--------RGRK-----ECA--CGCAGIYNAPVALSLYAK-VFE-EMGALDKLEAFTSFNGPD 282 (329)
Q Consensus 220 ~~G~Id~~i~SDHaPh~--------~~eK-----~~~--~~~~Gi~~~e~~lpll~~-~~~-~~~~l~~~v~~~s~nPAk 282 (329)
--..+ ++.||.-... ...+ ... .....+.|-.+.|.-.+. .+. ..+++++++++.+.|||+
T Consensus 262 g~~~~--~lvtD~~~~~G~~~g~y~~~~~~~~~~~~~~~~~~g~laG~~~~l~~~~~~l~~~~~l~~~~al~~aT~npA~ 339 (374)
T cd00854 262 GADKI--VLVTDAMAAAGLPDGEYELGGQTVTVKDGVARLADGTLAGSTLTMDQAVRNMVKWGGCPLEEAVRMASLNPAK 339 (374)
T ss_pred CCCcE--EEEeccccccCCCCCeEEECCEEEEEECCEEEcCCCCeeehHhhHHHHHHHHHHhhCCCHHHHHHHHhHHHHH
Confidence 11222 5678842211 1111 000 010113332223332222 222 357999999999999999
Q ss_pred hcCCC--CC------cccEEEEecceeec
Q 020186 283 FYGLP--RN------TSKIKLTKIPWKVP 303 (329)
Q Consensus 283 ifgl~--~~------dADlvi~~~~~~v~ 303 (329)
++|++ .| .|||+++|..+++.
T Consensus 340 ~lg~~~~~G~i~~G~~ADlvv~d~~~~v~ 368 (374)
T cd00854 340 LLGLDDRKGSLKPGKDADLVVLDDDLNVK 368 (374)
T ss_pred HcCCCCCcCCcCCCCcCCEEEECCCCcEE
Confidence 99996 23 69999997655553
No 69
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=98.36 E-value=2.4e-07 Score=87.22 Aligned_cols=111 Identities=10% Similarity=0.037 Sum_probs=67.9
Q ss_pred chhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCccc-ccC-CcCCccchhHHHHH
Q 020186 181 PQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE-CAC-GCAGIYNAPVALSL 258 (329)
Q Consensus 181 phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~-~~~-~~~Gi~~~e~~lpl 258 (329)
.|+.++ ++.+.. ....+..+++++ +++.+.| +....+.+. +..+++.+.....|. ... ...|..++....+-
T Consensus 193 ~~~~~~-~~~~~~--~~~~~~h~~~~~-~~~~~~l-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 266 (333)
T PF01979_consen 193 DHLGLL-EEAIDD--GVDLIAHGTHLS-DEEIELL-KETGIGIIH-CPISNDSAPHKPGKAIMMDGTAEGIYGLGSGGAP 266 (333)
T ss_dssp HHHHSC-HHHHHH--HCEEEEEHTTSE-HHHHHHH-HHHTHEEEE-EHHHHHHHHHHTTHHSETTBSBTSBSCTTHHHHH
T ss_pred ccchhh-hhhccc--ccceeeccccCC-HHHhhhh-hccCCcccc-ccchhhhhccccccccccchhccccccccccccc
Confidence 666777 555442 145677888888 3355555 556667776 777776543333332 112 22355555444444
Q ss_pred HHHHHHh--------------------cCCHHHHHHHHhhhhhhhcCC-CC-C------cccEEEEe
Q 020186 259 YAKVFEE--------------------MGALDKLEAFTSFNGPDFYGL-PR-N------TSKIKLTK 297 (329)
Q Consensus 259 l~~~~~~--------------------~~~l~~~v~~~s~nPAkifgl-~~-~------dADlvi~~ 297 (329)
+...+.+ .++++++++++|.||||+||+ ++ | +|||||||
T Consensus 267 ~~~~~~~~g~~lgtDg~~~~l~~~~~~~~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~ADlvv~D 333 (333)
T PF01979_consen 267 LFRMLDKMGVNLGTDGVAEELKLFVRLGISPEEALKMATINPAKILGLDDDKGSIEPGKDADLVVLD 333 (333)
T ss_dssp HHHHHHCTTHEETTCTTCHHHHHHHHHHSHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB--EEEEE
T ss_pred hhhhhhhcccccccccccccccccccccccccccccccchhHHHHcCCCCCEEEeCcCCCcCEEEeC
Confidence 4443332 189999999999999999999 33 4 79999985
No 70
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=98.28 E-value=7.4e-05 Score=67.56 Aligned_cols=141 Identities=17% Similarity=0.073 Sum_probs=80.0
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCC-CeEEEEecCCHHHHHHHHcccCCceEEE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ-LKVVMEHITTMDAVKFVESCKEGFVAAT 178 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~-~~lhi~HvSt~~sl~~i~~ak~~~vt~E 178 (329)
..++..++.+++.|++|++|+.... ..+ + .+++..+ .+..|.|..+. ..+.++++.+.+++++
T Consensus 108 ~~~~~~~~~a~e~~~pv~iH~~~~~----------~~~---~--~l~~~~~~~~~~i~H~~~~-~~~~~~~~~~~g~~~~ 171 (251)
T cd01310 108 EVFRAQLELAKELNLPVVIHSRDAH----------EDV---L--EILKEYGPPKRGVFHCFSG-SAEEAKELLDLGFYIS 171 (251)
T ss_pred HHHHHHHHHHHHhCCCeEEEeeCch----------HHH---H--HHHHhcCCCCCEEEEccCC-CHHHHHHHHHcCCEEE
Confidence 6788899999999999999998541 112 3 3444454 44445576542 2223332211456666
Q ss_pred ecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHH
Q 020186 179 VTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSL 258 (329)
Q Consensus 179 t~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpl 258 (329)
+++-.+. +.....+.+.+.+-.+.| +++||+ |.....+. .+..+.+. .++-
T Consensus 172 ~~~~~~~---------------------~~~~~~~~~~~~~~~dri--l~~TD~-p~~~~~~~--~~~~~~~~---~~~~ 222 (251)
T cd01310 172 ISGIVTF---------------------KNANELREVVKEIPLERL--LLETDS-PYLAPVPF--RGKRNEPA---YVKH 222 (251)
T ss_pred eeeeecc---------------------CCCHHHHHHHHhCChHHE--EEcccC-CCCCCCCC--CCCCCCCh---hHHH
Confidence 6543210 011122334444333344 789998 65433221 11123332 4554
Q ss_pred HHHHH-H-hcCCHHHHHHHHhhhhhhhcC
Q 020186 259 YAKVF-E-EMGALDKLEAFTSFNGPDFYG 285 (329)
Q Consensus 259 l~~~~-~-~~~~l~~~v~~~s~nPAkifg 285 (329)
++..+ . ..++.+.+.+++..||+|+||
T Consensus 223 ~~~~la~~~gl~~e~~~~~~~~N~~~ll~ 251 (251)
T cd01310 223 VAEKIAELKGISVEEVAEVTTENAKRLFG 251 (251)
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHHHHHhC
Confidence 55433 2 577999999999999999987
No 71
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=98.20 E-value=0.00038 Score=67.23 Aligned_cols=145 Identities=14% Similarity=0.130 Sum_probs=88.7
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHcccCCceEEEe
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATV 179 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~sl~~i~~ak~~~vt~Et 179 (329)
+.+.++++.+++.|.++.+|+...... + .+.... .+ ... .--|..|+ +.+.++.+++ ..+...+
T Consensus 197 ~~~~~~~~~A~~~g~~v~~H~~e~~~~-~-------~~~~~~--~~-g~~-~~~H~~~~-~~~~l~~la~---~g~~~~~ 260 (377)
T TIGR01224 197 EQSRRILQAAQEAGLPVKLHAEELSNL-G-------GAELAA--KL-GAV-SADHLEHA-SDAGIKALAE---AGTVAVL 260 (377)
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCCCC-C-------HHHHHH--Hc-CCC-ccHHHhcC-CHHHHHHHHh---cCCEEEE
Confidence 678999999999999999999642210 0 111111 11 111 11266666 5666776654 4678899
Q ss_pred cchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCC-CCcCcccccCCcCCccchhHHHHH
Q 020186 180 TPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAP-HERGRKECACGCAGIYNAPVALSL 258 (329)
Q Consensus 180 ~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaP-h~~~eK~~~~~~~Gi~~~e~~lpl 258 (329)
||..-+.- + ...||+ -+.+..|..- +++||+.| ... ... +..
T Consensus 261 ~P~~~~~l---------~---~~~~p~---------~~l~~~Gv~v-~lgTD~~~~~~~-----------~~~----~~~ 303 (377)
T TIGR01224 261 LPGTTFYL---------R---ETYPPA---------RQLIDYGVPV-ALATDLNPGSSP-----------TLS----MQL 303 (377)
T ss_pred CchHHHhc---------C---CcCccH---------HHHHHCCCCE-EEECCCCCCCCh-----------hHH----HHH
Confidence 99853210 1 122443 2334568776 99999865 210 011 111
Q ss_pred HHH--HHHhcCCHHHHHHHHhhhhhhhcCCCC--C------cccEEEEe
Q 020186 259 YAK--VFEEMGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTK 297 (329)
Q Consensus 259 l~~--~~~~~~~l~~~v~~~s~nPAkifgl~~--~------dADlvi~~ 297 (329)
.+. ....++++++++++.+.|||+.+|++. | .|||+++|
T Consensus 304 ~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d 352 (377)
T TIGR01224 304 IMSLACRLMKMTPEEALHAATVNAAYALGLGEERGTLEAGRDADLVILS 352 (377)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEEc
Confidence 111 123478999999999999999999842 3 69999994
No 72
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=98.20 E-value=0.00053 Score=67.59 Aligned_cols=177 Identities=18% Similarity=0.126 Sum_probs=102.1
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHH-----HHH-HHHHhcCCCeEEEEecC--CHHHHHHHHccc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQ-PLIQRLPQLKVVMEHIT--TMDAVKFVESCK 171 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~-----~~~-~~la~~~~~~lhi~HvS--t~~sl~~i~~ak 171 (329)
+.|.++++.+++.|.++.+|+.... .|...+.+ -.. ..-....+.++.+.|.. +.+.++++++
T Consensus 189 ~~l~~~~~~A~~~g~~v~~H~~e~~-------~~~~~~~~~~g~~~~~~l~~~G~l~~~~~~~H~~~l~~~~l~~la~-- 259 (424)
T PRK08393 189 ALLKWVREKAREWNKLITIHLSETM-------DEIKQIREKYGKSPVVLLDEIGFLNEDVIAAHGVWLSSRDIRILAS-- 259 (424)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCH-------HHHHHHHHHhCcCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHh--
Confidence 7899999999999999999985431 11111111 010 01112345555555554 6778888876
Q ss_pred CCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccc
Q 020186 172 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN 251 (329)
Q Consensus 172 ~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~ 251 (329)
..+++..||.- +... +.+ .+|+ -+.+..|.- ..+|||-. ++. + ...-
T Consensus 260 -~g~~v~~~P~s-----n~~l--g~g-----~~~~---------~~~~~~Gv~-v~lGtD~~-~~~-------~--~~d~ 306 (424)
T PRK08393 260 -AGVTVAHNPAS-----NMKL--GSG-----VMPL---------RKLLNAGVN-VALGTDGA-ASN-------N--NLDM 306 (424)
T ss_pred -cCCEEEECHHH-----HHhh--ccC-----CCCH---------HHHHHCCCc-EEEecCCC-ccC-------C--chhH
Confidence 46788889942 1111 111 1333 223344644 48999952 110 0 1111
Q ss_pred h-hHHHHHHHHHHHh----cCCHHHHHHHHhhhhhhhcCCCCC------cccEEEE--ecceeecCCccCcCCcccccCC
Q 020186 252 A-PVALSLYAKVFEE----MGALDKLEAFTSFNGPDFYGLPRN------TSKIKLT--KIPWKVPEAFSFSFGDIIPMFA 318 (329)
Q Consensus 252 ~-e~~lpll~~~~~~----~~~l~~~v~~~s~nPAkifgl~~~------dADlvi~--~~~~~v~~~~~~s~~~~spf~~ 318 (329)
+ |..+..++....+ .+++++++++.+.|||+.+|++.| .|||+++ +..+.++..+..+...|+++ .
T Consensus 307 ~~~~~~a~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~G~l~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~-~ 385 (424)
T PRK08393 307 LREMKLAALLHKVHNLDPTIADAETVFRMATQNGAKALGLKAGVIKEGYLADIAVIDFNRPHLRPINNPISHLVYSAN-G 385 (424)
T ss_pred HHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHhCCCCCccCCCCccCEEEEeCCCCCcCCCCChHHHeeeeCC-C
Confidence 1 2222222221111 247899999999999999998533 7999999 45566666667777777776 5
Q ss_pred C
Q 020186 319 G 319 (329)
Q Consensus 319 G 319 (329)
+
T Consensus 386 ~ 386 (424)
T PRK08393 386 N 386 (424)
T ss_pred C
Confidence 4
No 73
>PRK09356 imidazolonepropionase; Validated
Probab=98.19 E-value=2.2e-05 Score=76.65 Aligned_cols=65 Identities=15% Similarity=0.060 Sum_probs=44.3
Q ss_pred HHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHHH--HHhcCCHHHHHHHHhhhhhhhcCC-CC-C----
Q 020186 218 AVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKV--FEEMGALDKLEAFTSFNGPDFYGL-PR-N---- 289 (329)
Q Consensus 218 al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~--~~~~~~l~~~v~~~s~nPAkifgl-~~-~---- 289 (329)
.+..|... .++||+.|... + .. .+...+.. ....++.+++++..+.|||+.+|+ ++ |
T Consensus 304 l~~~Gi~v-~lgtD~~~~~~-----~-----~~----~~~~~~~~~~~~~~l~~~~~l~~~T~~~A~~~g~~~~~G~i~~ 368 (406)
T PRK09356 304 LRDAGVPV-ALATDFNPGSS-----P-----TE----SLLLAMNMACTLFRLTPEEALAAVTINAARALGRQDTHGSLEV 368 (406)
T ss_pred HHHCCCeE-EEeCCCCCCCC-----h-----hH----HHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCC
Confidence 34668887 99999965210 1 11 12222221 224789999999999999999998 32 3
Q ss_pred --cccEEEEe
Q 020186 290 --TSKIKLTK 297 (329)
Q Consensus 290 --dADlvi~~ 297 (329)
.|||+|+|
T Consensus 369 G~~AD~vvld 378 (406)
T PRK09356 369 GKKADLVIWD 378 (406)
T ss_pred CCcCCEEEEC
Confidence 79999995
No 74
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=98.16 E-value=0.00023 Score=70.71 Aligned_cols=155 Identities=12% Similarity=0.027 Sum_probs=90.3
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHH-------HHHHHHHHHHHhcCCCeEEEEecC--CHHHHHHHHcc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKV-------FIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESC 170 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~-------av~~~~~~~la~~~~~~lhi~HvS--t~~sl~~i~~a 170 (329)
+.+.++++.+++.|.++.+|+.... ...+.. .+.+. .-....+.++.+.|.. +.+.++.+++
T Consensus 214 e~l~~~~~~A~~~g~~v~~H~~e~~-----~~~~~~~~~~g~~~~~~l---~~~g~l~~~~~~~H~~~l~~~~~~~la~- 284 (451)
T PRK08203 214 ELMRESAALARRLGVRLHTHLAETL-----DEEAFCLERFGMRPVDYL---EDLGWLGPDVWLAHCVHLDDAEIARLAR- 284 (451)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCH-----HHHHHHHHHhCCCHHHHH---HHcCCCCCCeEEEEEeCCCHHHHHHHHh-
Confidence 7899999999999999999984321 111100 01111 1112234566555554 4566777665
Q ss_pred cCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCcc
Q 020186 171 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 250 (329)
Q Consensus 171 k~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~ 250 (329)
..+..-.||..- +. .+ .-.|| +.+.+..|.-= .++||..+.. ++..
T Consensus 285 --~g~~v~~~P~~~------~~---l~---~~~~~---------~~~~~~~Gv~v-~lGtD~~~~~----------~~~~ 330 (451)
T PRK08203 285 --TGTGVAHCPCSN------MR---LA---SGIAP---------VRELRAAGVPV-GLGVDGSASN----------DGSN 330 (451)
T ss_pred --cCCeEEECcHHh------hh---hc---cCCCC---------HHHHHHCCCeE-EEecCCCccC----------CCcC
Confidence 356667888521 11 11 01133 34455567664 9999964211 1111
Q ss_pred -chhHHHHHHHHHHH---hcCCHHHHHHHHhhhhhhhcCCCC-C------cccEEEEe
Q 020186 251 -NAPVALSLYAKVFE---EMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK 297 (329)
Q Consensus 251 -~~e~~lpll~~~~~---~~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi~~ 297 (329)
--|+.+++++.... ..+++.+++++++.||||.+|++. | .|||+|+|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~T~~~A~~lg~~~~G~l~~G~~ADlvv~d 388 (451)
T PRK08203 331 LIGEARQALLLQRLRYGPDAMTAREALEWATLGGARVLGRDDIGSLAPGKLADLALFD 388 (451)
T ss_pred HHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHHhCCCCCCCcCCCCccCEEEEc
Confidence 12344444433221 257999999999999999999853 3 69999995
No 75
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=98.16 E-value=1.9e-05 Score=76.79 Aligned_cols=240 Identities=16% Similarity=0.082 Sum_probs=123.7
Q ss_pred cchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEE---EEE-eCCCCC-H-HH-HHH--HHh-cCc
Q 020186 7 LPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLM---TLY-LTDTTS-P-DE-IKL--ARK-TGV 76 (329)
Q Consensus 7 ~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~---~~~-~~~~~~-~-~e-l~~--l~~-~G~ 76 (329)
...+.+.|+||+.++. ....++.+.++.+++..++.... +++.++. ++- ..++.. . .. +.. +.+ .|.
T Consensus 136 ~~~~~a~GiTt~~d~~--~~~~~~~~~~~~~~~l~~~~~l~-~rv~~~~~~~~vk~~~dg~~~~~~a~~~~~~~~~~~g~ 212 (404)
T PF07969_consen 136 AMAAGAYGITTVLDYG--GGFASDPEDLEALRELAAEGGLP-LRVHLYPRIGGVKIFADGSPGGRTALLEEPYYADEPGA 212 (404)
T ss_dssp HHHHCHTCEEEETTCE--CCCGEHHHHHHHHHHHHHCTC---SEEEEEEEEEEEEEESSSSTTHHHHHHHHHHHHHHHTS
T ss_pred HHHhcCCCeEEecCCc--cccCCCHHHHHHHHHHhhhcCCC-eeeeeecccCceeeccccccccchhhhccccccCcccc
Confidence 5677899999999998 44455667777766655543211 5655553 221 123322 1 11 111 222 221
Q ss_pred eeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEE
Q 020186 77 VFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVME 156 (329)
Q Consensus 77 v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~ 156 (329)
-.. ..+....+. +.+.+.++.+.+.|..+.+|+... .++..++. .+ +..+....+.
T Consensus 213 ~~~----------~~g~~~~~~-~~l~~~v~~a~~~g~~v~vHa~gd-----------~a~~~~l~-a~-~~~~~~~~i~ 268 (404)
T PF07969_consen 213 PVH----------ISGLPSFDP-EELEELVRAAREAGLQVAVHAIGD-----------RAIDEALD-AI-EAARARGRIE 268 (404)
T ss_dssp EEE----------ETC--SSSH-HHHHHHHHHHHHCT-EEEEEEESH-----------HHHHHHHH-HH-HHHTCCHEEE
T ss_pred ccc----------ccccccccc-hhHHHHHHHHHhcCCeeEEEEcCC-----------chHHhHHH-HH-Hhhcccceee
Confidence 101 112222333 568999999999999999999532 12322221 11 1111111455
Q ss_pred ecC--CHHHHHHHHcccCCceEEEecchhhhcchh-hhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCC
Q 020186 157 HIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRN-ALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSA 233 (329)
Q Consensus 157 HvS--t~~sl~~i~~ak~~~vt~Et~phhL~l~~~-~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHa 233 (329)
|.+ +++.++.+++ ..+..++.|||+..... .+.. ..+ +-| ......+...+..|..- +++||+.
T Consensus 269 h~~~~~~~~~~~~~~---l~~~~~~~p~~~~~~~~~~~~~-~~~-------~~~-~~~~~~~~~~~~~Gv~v-~~gsD~p 335 (404)
T PF07969_consen 269 HAELIDPDDIERMAE---LGVTASVQPHFLFSWGGEWYEE-RLG-------PER-ARRIYPIRSLLDAGVRV-ALGSDAP 335 (404)
T ss_dssp EHCBCCHHHHHHHHH---HTTEEEECCTHHHHETEETHHH-HHH-------HHC-GGGBTHHHHHHHCTTEE-EE--TTT
T ss_pred ccccCCHHHHHHHHH---hCCccccChhHhhhccchhhhh-hhh-------hHH-HHHHhHHHHHHhccCce-ecCcCCc
Confidence 544 6777766655 56899999988876541 1110 000 000 01113455667778665 8889973
Q ss_pred CCCcCcccccCCcCCccchhHHHHHH-HHHH-------HhcCCHHHHHHHHhhhhhhhcCCC-C-C------cccEEE
Q 020186 234 PHERGRKECACGCAGIYNAPVALSLY-AKVF-------EEMGALDKLEAFTSFNGPDFYGLP-R-N------TSKIKL 295 (329)
Q Consensus 234 Ph~~~eK~~~~~~~Gi~~~e~~lpll-~~~~-------~~~~~l~~~v~~~s~nPAkifgl~-~-~------dADlvi 295 (329)
.+. ..|+ .++.. ..... .... .+.+|+++.++.++.|||+.+|++ + | .|||||
T Consensus 336 -~~~---~~P~--~~~~~---~~~~~~~~~~~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~~Gsl~~Gk~AD~vV 404 (404)
T PF07969_consen 336 -VSP---PNPF--RGIWA---AVTRQMAGERSGPVLGPEQRLSLEEALRAYTSNPARALGLEDRKGSLEPGKLADFVV 404 (404)
T ss_dssp -TSS---CCHH--HHHHH---HHHHHHCHHTHHHCCGGTGSSHHHHHHHHTTHHHHHHTT-TTTSSSSSTTSBS-EEE
T ss_pred -ccc---cCcc--hhhhh---hhccccccccccccccccccCCHHHHHHHHhHHHHHHcCCCCCcceECCCCCcCeEC
Confidence 210 0011 01111 11110 0111 157899999999999999999994 3 4 799987
No 76
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=98.11 E-value=0.00014 Score=73.31 Aligned_cols=195 Identities=18% Similarity=0.147 Sum_probs=119.4
Q ss_pred CCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHH-HHH-h---cCCCeEEEEecCC--HHHHH
Q 020186 93 DGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP-LIQ-R---LPQLKVVMEHITT--MDAVK 165 (329)
Q Consensus 93 ~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~-~la-~---~~~~~lhi~HvSt--~~sl~ 165 (329)
..+.+. +.|.+.++.+.+.|.++.+||=-+. ++..++.. +-+ + .-+.+-.|.|++. ++-++
T Consensus 315 ~~l~~~-e~l~~~v~~a~~~gl~v~vHAiGD~-----------Av~~~LdafE~~~~~~~~~~~r~rieH~~~v~~~~i~ 382 (535)
T COG1574 315 ELLLTE-EELEELVRAADERGLPVAVHAIGDG-----------AVDAALDAFEKARKKNGLKGLRHRIEHAELVSPDQIE 382 (535)
T ss_pred CcccCH-HHHHHHHHHHHHCCCcEEEEEechH-----------HHHHHHHHHHHHhhhcCCccCCceeeeeeecCHhHHH
Confidence 344455 8999999999999999999996431 22222210 111 1 2368888999884 44443
Q ss_pred HHHcccCCceEEEecchhhhcchhhhcCCCCC-CceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccC
Q 020186 166 FVESCKEGFVAATVTPQHLVLNRNALFQGGLR-PHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECAC 244 (329)
Q Consensus 166 ~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~-~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~ 244 (329)
-+ +++.+.+.+-|+|++...+.+.. .+| .+.+-++|+|+ .++.|.+= .-+||- |-+..+ |+
T Consensus 383 R~---~~Lgv~~svQP~f~~~~~~~~~~-rlG~~r~~~~~p~~~---------ll~~G~~l-a~gSD~-Pv~~~d---P~ 444 (535)
T COG1574 383 RF---AKLGVIASVQPNFLFSDGEWYVD-RLGEERASRSYPFRS---------LLKAGVPL-AGGSDA-PVEPYD---PW 444 (535)
T ss_pred HH---HhcCceEeeccccccccchHHHH-hhhhhhhhccCcHHH---------HHHCCCeE-eccCCC-CCCCCC---hH
Confidence 33 33789999999999866433332 122 24555666543 45668875 888995 432111 11
Q ss_pred CcCCccchhHHHHHH-HH--H--HHhcCCHHHHHHHHhhhhhhhcCCC--CC------cccEEEEe-cceeecCCccC-c
Q 020186 245 GCAGIYNAPVALSLY-AK--V--FEEMGALDKLEAFTSFNGPDFYGLP--RN------TSKIKLTK-IPWKVPEAFSF-S 309 (329)
Q Consensus 245 ~~~Gi~~~e~~lpll-~~--~--~~~~~~l~~~v~~~s~nPAkifgl~--~~------dADlvi~~-~~~~v~~~~~~-s 309 (329)
-||.. .+--- .. . ...++++++.+++.+.|+|...|.. +| .|||+|+| ..|+++++.+. -
T Consensus 445 --~~i~~---AVtr~~~~g~~~~~~~~L~~~eAL~~yT~~~A~a~~~e~~~G~Le~G~~AD~~Vld~d~f~~~~~~i~~~ 519 (535)
T COG1574 445 --LGIYA---AVTRKTPGGRVLGPEERLTREEALRAYTEGGAYASGAEGEKGSLEPGKLADFAVLDRDPFTVDPDSIKDT 519 (535)
T ss_pred --HHHHH---HHcCCCCCCCCCccccccCHHHHHHHHhhhhHHhhhccccccccccCceeeEEEecCCcccCChHHhccc
Confidence 01111 00000 00 0 0116899999999999999998872 23 69999995 58999866653 3
Q ss_pred CCcccccCCCcEEE
Q 020186 310 FGDIIPMFAGNTLE 323 (329)
Q Consensus 310 ~~~~spf~~G~~l~ 323 (329)
+..-|.+ +|+.+.
T Consensus 520 ~v~~T~~-~Gk~VY 532 (535)
T COG1574 520 KVVLTIV-AGKVVY 532 (535)
T ss_pred eEEEEEE-cCeEee
Confidence 5566777 776543
No 77
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=98.10 E-value=4.1e-05 Score=74.39 Aligned_cols=51 Identities=12% Similarity=0.011 Sum_probs=37.6
Q ss_pred cccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 020186 5 TILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT 56 (329)
Q Consensus 5 ~~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~ 56 (329)
++..+++++|||++++++.|.|+.+..+.++.+.+..++. ..+.++++|.-
T Consensus 81 ~~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~-~~a~~lG~HlE 131 (380)
T TIGR00221 81 IMSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKE-KNAQALGLHLE 131 (380)
T ss_pred HHHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhcc-CCceeeeEeee
Confidence 5678899999999999999998877777777665543221 11268998874
No 78
>PRK07572 cytosine deaminase; Validated
Probab=97.96 E-value=0.00089 Score=66.03 Aligned_cols=245 Identities=16% Similarity=0.119 Sum_probs=120.8
Q ss_pred cchhcccCccEEEECCCC-CCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEe----CCCCCHHHHHHHHhcCceeEEE
Q 020186 7 LPICSVSHYGRAIVMPNL-KPPITTTAAAVAYRESILKALPASSNFTPLMTLYL----TDTTSPDEIKLARKTGVVFAVK 81 (329)
Q Consensus 7 ~~~Aa~GGvTtvidmPnt-~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~----~~~~~~~el~~l~~~G~v~~~K 81 (329)
+..++..|+|+|-+|-+. .|.. ..++...+ +.+.-...+|+.... +.. ......+.+++..+.|+-
T Consensus 104 ~~e~l~~G~Ttvrd~~d~~~~~~---~~~~a~~~-~~~~~~~~~~~~~~a-~~~~g~~~~~~~~~~~~~~l~~g~d---- 174 (426)
T PRK07572 104 CDWAVARGLLAIRSHVDVCDPRL---LAVEALLE-VRERVAPYLDLQLVA-FPQDGVLRSPGAVDNLERALDMGVD---- 174 (426)
T ss_pred HHHHHHcCcccEeeccccCCCcc---cHHHHHHH-HHHHhhccceEEEEe-ccChhhccCccHHHHHHHHHHcCCC----
Confidence 445688999999998643 2322 22332222 221110014544322 111 011223445666666731
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEec-CCCCCCCChhHHHHHHHHHHHHHHHHhcCC--CeEEEEec
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHG-EVTDPIVDIFDREKVFIDTILQPLIQRLPQ--LKVVMEHI 158 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHa-Ed~~~~~~~~~~E~~av~~~~~~~la~~~~--~~lhi~Hv 158 (329)
++ ++.... ....++..+.+..+++.+++.|.++.+|+ |..+.. ...+.+.. ......| .++.+.|.
T Consensus 175 ~i-Gg~p~~-~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~-------~~~~~~~~--~~~~~~G~~~~v~~~H~ 243 (426)
T PRK07572 175 VV-GGIPHF-ERTMADGAESVRLLCEIAAERGLRVDMHCDESDDPL-------SRHIETLA--AETQRLGLQGRVAGSHL 243 (426)
T ss_pred EE-eCCCCC-ccccchHHHHHHHHHHHHHHcCCCeEEEECCCCChh-------HHHHHHHH--HHHHHhCCCCCEEEEcc
Confidence 11 111111 11111211678999999999999999999 533211 11122222 1222223 27778887
Q ss_pred CC---------HHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEe
Q 020186 159 TT---------MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLG 229 (329)
Q Consensus 159 St---------~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~ 229 (329)
.. .+.+++++++ .+..=.||..-+. .. + .....|+-+.-. .+.+.+..|.- +.+|
T Consensus 244 ~~l~~~~~~~~~~~~~~la~~---g~~vv~~P~~n~~-----l~---~-~~~~~~~~~g~~---~v~~l~~~GV~-v~lG 307 (426)
T PRK07572 244 TSMHSMDNYYVSKLIPLMAEA---GVNAIANPLINIT-----LQ---G-RHDTYPKRRGMT---RVPELMAAGIN-VAFG 307 (426)
T ss_pred chhhcCCHHHHHHHHHHHHHc---CCeEEECchhhhh-----hc---C-CCCCCCCCCCCc---CHHHHHHCCCc-EEEe
Confidence 54 3457777654 4566677843211 00 0 001122222222 24455556754 4999
Q ss_pred cCCCCCCcCcccccCCcCCccc-hhHHHHHHHHHHHhcC----CHHHHHHHHhhhhhhhcCCCC------CcccEEEEe
Q 020186 230 TDSAPHERGRKECACGCAGIYN-APVALSLYAKVFEEMG----ALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK 297 (329)
Q Consensus 230 SDHaPh~~~eK~~~~~~~Gi~~-~e~~lpll~~~~~~~~----~l~~~v~~~s~nPAkifgl~~------~dADlvi~~ 297 (329)
||+..- +|...|... +|.+.-.+ ...++ .+.++++..+.||||++|++. +.|||++++
T Consensus 308 tD~~~~-------~~~~~~~~~~~e~~~~~~---~~~~~~~~~~l~~~l~~aT~~~A~~lgl~~~gi~~G~~ADlvl~d 376 (426)
T PRK07572 308 HDCVMD-------PWYSLGSGDMLEVAHMGL---HVAQMTGQDAMRACFDAVTVNPARIMGLEGYGLEPGCNADLVLLQ 376 (426)
T ss_pred cCCCCC-------CCCCCCCCCHHHHHHHHH---HHHcCCCHHHHHHHHHHhhcchHHhhCCCCcCCCCCCcCCEEEEe
Confidence 998411 121123222 22222111 11122 356788899999999999842 279999995
No 79
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=97.92 E-value=0.00011 Score=66.83 Aligned_cols=179 Identities=20% Similarity=0.256 Sum_probs=101.9
Q ss_pred HHHHHHHH-hcCceeEEEEeeccccccCCCCccChHHHHH-HHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHH
Q 020186 65 PDEIKLAR-KTGVVFAVKLYPAGATTNSQDGVTDLFGKCV-HVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQ 142 (329)
Q Consensus 65 ~~el~~l~-~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~-~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~ 142 (329)
.+++.... +.| +.|+|+++... +....+ ..+. ++++.++++|.+|.+|+..... ............+.
T Consensus 87 ~~~l~~~~~~~g-~~Gv~l~~~~~----~~~~~~--~~~~~~~~~~~~~~~~pv~~H~g~~~~--~~~~~~~~~~~~~~- 156 (273)
T PF04909_consen 87 VEELERALQELG-FRGVKLHPDLG----GFDPDD--PRLDDPIFEAAEELGLPVLIHTGMTGF--PDAPSDPADPEELE- 156 (273)
T ss_dssp HHHHHHHHHTTT-ESEEEEESSET----TCCTTS--GHCHHHHHHHHHHHT-EEEEEESHTHH--HHHHHHHHHHHHHT-
T ss_pred HHHHHHhccccc-eeeeEecCCCC----cccccc--HHHHHHHHHHHHhhccceeeeccccch--hhhhHHHHHHHHHH-
Confidence 45677666 556 57999997431 222334 3444 8999999999999999761100 00011111121111
Q ss_pred HHHHhcCCCeEEEEecCCH-----HHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHH
Q 020186 143 PLIQRLPQLKVVMEHITTM-----DAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVS 217 (329)
Q Consensus 143 ~~la~~~~~~lhi~HvSt~-----~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~ 217 (329)
..+.++.++++.+.|.... +.++++++. .+++++++-.+-. ....++......-..+.+
T Consensus 157 ~~~~~~P~l~ii~~H~G~~~~~~~~~~~l~~~~--~nvy~d~s~~~~~--------------~~~~~~~~~~~~l~~~~~ 220 (273)
T PF04909_consen 157 ELLERFPDLRIILAHLGGPFPWWEEALRLLDRF--PNVYVDLSGIPPF--------------WYFWPPSFDRPFLRRAVD 220 (273)
T ss_dssp THHHHSTTSEEEESGGGTTHHHHHHHHHHHHHH--TTEEEECHSHHSS--------------EEEETTHHCHHHHHHHHH
T ss_pred HHHHHhcCCeEEEecCcccchhHHHHHHHHHhC--Ccccccccccccc--------------cccCcccccHHHHHHHHH
Confidence 1457888999999999998 556665544 5788888652211 222233333333344444
Q ss_pred HHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHH-HHHhcCCHHHHHHHHhhhhhhhcCC
Q 020186 218 AVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAK-VFEEMGALDKLEAFTSFNGPDFYGL 286 (329)
Q Consensus 218 al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~-~~~~~~~l~~~v~~~s~nPAkifgl 286 (329)
..-.+.| +.|||. |+..... + ....+. .....++-+..-++++.|++|+|||
T Consensus 221 ~~g~dri--lfGSD~-P~~~~~~-------~-------~~~~~~~~~~~~l~~~~~~~i~~~NA~rl~~l 273 (273)
T PF04909_consen 221 EFGPDRI--LFGSDY-PHPDGAS-------P-------YEYIWEAYFLDDLSEEEREKILYDNARRLYGL 273 (273)
T ss_dssp HHTGGGE--EEE--T-TSSTHHH-------H-------HHHHHHHHHHHHSSHHHHHHHHTHHHHHHHTC
T ss_pred HhCCceE--EecCCC-CCCCccc-------c-------HHHHHHhhhccCCCHHHHHHHHhHhHHHHcCc
Confidence 4434565 889995 6643211 1 111111 1111268889999999999999996
No 80
>PRK06687 chlorohydrolase; Validated
Probab=97.87 E-value=0.0012 Score=64.81 Aligned_cols=233 Identities=14% Similarity=0.079 Sum_probs=117.9
Q ss_pred hhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC---CHHHHHHHHh----cCceeEEE
Q 020186 9 ICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT---SPDEIKLARK----TGVVFAVK 81 (329)
Q Consensus 9 ~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~---~~~el~~l~~----~G~v~~~K 81 (329)
..+.+|+||++||.+..+ ....+.+ +.+.+.... +.+++... ...... ..++...+.+ .+. ..+|
T Consensus 111 e~l~~GvTTv~d~~~~~~-~~~~~~~----~a~~~~Gir-~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~-~~i~ 182 (419)
T PRK06687 111 EMLQSGTTTFNDMYNPNG-VDIQQIY----QVVKTSKMR-CYFSPTLF-SSETETTAETISRTRSIIDEILKYKN-PNFK 182 (419)
T ss_pred HHHhcCcceeehhhcccc-ccHHHHH----HHHHHhCCc-eEeccccc-cCCcccHHHHHHHHHHHHHHHhccCC-CceE
Confidence 348899999999974332 2222222 222222211 34433210 001111 1233334432 221 2367
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHH-HH----HHHHHHH--hcCCCeEE
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFI-DT----ILQPLIQ--RLPQLKVV 154 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av-~~----~~~~~la--~~~~~~lh 154 (329)
+.++... ...+++ +.+.++++.+++.|.++.+|+.... .|...+ .+ .+. .+. ...+-++.
T Consensus 183 ~~~~~~~---~~~~s~--e~l~~~~~~A~~~g~~i~~H~~e~~-------~e~~~~~~~~g~~~~~-~l~~~g~l~~~~~ 249 (419)
T PRK06687 183 VMVAPHS---PYSCSR--DLLEASLEMAKELNIPLHVHVAETK-------EESGIILKRYGKRPLA-FLEELGYLDHPSV 249 (419)
T ss_pred EEEeCCC---CCCCCH--HHHHHHHHHHHHcCCcEEEEeCCCH-------HHHHHHHHHHCcCHHH-HHHHcCCCCCCeE
Confidence 7665421 123344 7899999999999999999986442 111111 00 010 111 22344455
Q ss_pred EEecC--CHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCC
Q 020186 155 MEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDS 232 (329)
Q Consensus 155 i~HvS--t~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDH 232 (329)
+.|.. +.+.++++++. .+.+-.||.. +... +.| .||+ .+.+..|.- ..+|||-
T Consensus 250 ~~H~~~~~~~~~~~la~~---g~~v~~~P~s-----n~~l--~~g-----~~p~---------~~~~~~Gv~-v~lGtD~ 304 (419)
T PRK06687 250 FAHGVELNEREIERLASS---QVAIAHNPIS-----NLKL--ASG-----IAPI---------IQLQKAGVA-VGIATDS 304 (419)
T ss_pred EEEEecCCHHHHHHHHHc---CCeEEECcHH-----hhhh--ccC-----CCcH---------HHHHHCCCe-EEEeCCC
Confidence 55544 56677777653 4455568852 1111 111 2443 233444654 4899996
Q ss_pred CCCCcCcccccCCcCCccchh-HHHHHHHHHHH-h---cCCHHHHHHHHhhhhhhhcCCCC--C------cccEEEEe
Q 020186 233 APHERGRKECACGCAGIYNAP-VALSLYAKVFE-E---MGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTK 297 (329)
Q Consensus 233 aPh~~~eK~~~~~~~Gi~~~e-~~lpll~~~~~-~---~~~l~~~v~~~s~nPAkifgl~~--~------dADlvi~~ 297 (329)
.+- + +....++ ..+..++.... + .++.++++++.+.||||.+|++. | .|||+++|
T Consensus 305 ~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~~~~G~l~~G~~ADlv~~d 372 (419)
T PRK06687 305 VAS--------N--NNLDMFEEGRTAALLQKMKSGDASQFPIETALKVLTIEGAKALGMENQIGSLEVGKQADFLVIQ 372 (419)
T ss_pred CCC--------C--CChhHHHHHHHHHHHhccccCCCccCCHHHHHHHHhHHHHHHcCCCCCCcccCCCccCCEEEEC
Confidence 321 0 0111121 12222222111 1 36899999999999999999842 3 69999995
No 81
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=97.87 E-value=0.0042 Score=60.61 Aligned_cols=155 Identities=14% Similarity=0.072 Sum_probs=88.5
Q ss_pred HHHHHHHHHhhHc-CCcEEEecCCCCCCCChhHHHHHHHHHH-------HHH-HHHhcCCCeEEEEecC--CHHHHHHHH
Q 020186 100 GKCVHVLEEMVEQ-NMPLLVHGEVTDPIVDIFDREKVFIDTI-------LQP-LIQRLPQLKVVMEHIT--TMDAVKFVE 168 (329)
Q Consensus 100 ~~l~~~l~~~~~~-~~~v~vHaEd~~~~~~~~~~E~~av~~~-------~~~-~la~~~~~~lhi~HvS--t~~sl~~i~ 168 (329)
+.|.++++.+++. |.++.+|+..... |...+.+. +.. .-....|.++.+.|.. +.+.+++++
T Consensus 186 e~l~~~~~~A~~~~g~~v~~H~~e~~~-------~~~~~~~~~~~~~~~~~~l~~~g~lg~~~~~~H~~~~~~~~~~~l~ 258 (401)
T TIGR02967 186 EQLAAAGELAKEYPDVYVQTHLSENKD-------EIAWVKELFPEAKDYLDVYDHYGLLGRRSVFAHCIHLSDEECQRLA 258 (401)
T ss_pred HHHHHHHHHHHhCCCCeeEEEECCCch-------HHHHHHHHcCCCCcHHHHHHHCCCCCCCeEEEecccCCHHHHHHHH
Confidence 7899999999998 9999999853311 11111110 100 1112235577677766 456677776
Q ss_pred cccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCC
Q 020186 169 SCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG 248 (329)
Q Consensus 169 ~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~G 248 (329)
+ ..+.+-.||..-+ .. +. -.||+ .+.+..|.-- .++||..... .
T Consensus 259 ~---~g~~v~~~P~~~~-----~~--~~-----g~~~~---------~~~~~~Gv~v-~lGtD~~~~~-----------~ 302 (401)
T TIGR02967 259 E---TGAAIAHCPTSNL-----FL--GS-----GLFNL---------KKALEHGVRV-GLGTDVGGGT-----------S 302 (401)
T ss_pred H---cCCeEEEChHHHH-----Hh--cc-----CCCCH---------HHHHHCCCeE-EEecCCCCCC-----------C
Confidence 5 3567778885311 11 11 13443 2334557544 8999963210 1
Q ss_pred ccchhH-HHHHHHHHHH-hcCCHHHHHHHHhhhhhhhcCCCC--C------cccEEEEe
Q 020186 249 IYNAPV-ALSLYAKVFE-EMGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTK 297 (329)
Q Consensus 249 i~~~e~-~lpll~~~~~-~~~~l~~~v~~~s~nPAkifgl~~--~------dADlvi~~ 297 (329)
..-++. .+-+.+.... ..++.++++++.+.|||+.+|++. | .|||+|+|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~~A~~lg~~~~~G~i~~G~~ADlvi~d 361 (401)
T TIGR02967 303 FSMLQTLREAYKVSQLQGARLSPFEAFYLATLGGARALDLDDRIGNFEPGKEADFVVLD 361 (401)
T ss_pred cCHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHhCCcCCccccCCCCccCEEEEc
Confidence 111111 1111111112 247899999999999999999852 3 69999994
No 82
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=97.86 E-value=0.0015 Score=66.05 Aligned_cols=33 Identities=15% Similarity=0.199 Sum_probs=28.9
Q ss_pred hcCCHHHHHHHHhhhhhhhcCCCC-C------cccEEEEe
Q 020186 265 EMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK 297 (329)
Q Consensus 265 ~~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi~~ 297 (329)
+.+++++++++++.||||+||+++ | +|||+|||
T Consensus 428 Re~sL~EI~~mtTanPAkaLGL~dkG~L~pGa~ADIaI~D 467 (556)
T TIGR03121 428 REYSLYEIAIMTRAGPAKLLGLTDRGHLGVGADADIAVYD 467 (556)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCCCCCcCCCCcCCEEEEe
Confidence 456899999999999999999953 4 79999994
No 83
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=97.84 E-value=0.00042 Score=66.80 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=79.1
Q ss_pred CcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHcccCCceEEEecchhhhcchhhhcC
Q 020186 114 MPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQ 193 (329)
Q Consensus 114 ~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~ 193 (329)
.++.+||... ..+.+++ .+++..|.++.|.|.... .+.+.+.++.++.+-++|.+-......
T Consensus 193 ~~v~vHa~~~-----------~~i~~~l--~~~~e~g~~~~i~H~~~~--~~~~~~la~~gv~v~~~P~~~~~~~~~--- 254 (359)
T cd01309 193 IPVRIHAHRA-----------DDILTAI--RIAKEFGIKITIEHGAEG--YKLADELAKHGIPVIYGPTLTLPKKVE--- 254 (359)
T ss_pred eeEEEEeCCH-----------HHHHHHH--HHHHHcCCCEEEECchhH--HHHHHHHHHcCCCEEECccccccccHH---
Confidence 7888898743 2355555 567778888888998743 333333333456666777642211100
Q ss_pred CCCCCceEEcCCCCChhhHHHHHHHHHcC-CCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHH-HHHhcCCHHH
Q 020186 194 GGLRPHNYCLPVLKREIHRQAVVSAVTSG-SRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAK-VFEEMGALDK 271 (329)
Q Consensus 194 ~~~~~~~k~~PPLR~~~dr~aLw~al~~G-~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~-~~~~~~~l~~ 271 (329)
+.+. ....+-+.+..| ..- .++|||.++. .. .++..+. .....++.++
T Consensus 255 -----------~~~~--~~~~~~~l~~aGGv~v-algsD~~~~~------------~~----~l~~~~~~a~~~gl~~~~ 304 (359)
T cd01309 255 -----------EVND--AIDTNAYLLKKGGVAF-AISSDHPVLN------------IR----NLNLEAAKAVKYGLSYEE 304 (359)
T ss_pred -----------Hhhc--chhhHHHHHHcCCceE-EEECCCCCcc------------ch----hHHHHHHHHHHcCCCHHH
Confidence 0000 001122334456 664 9999993221 00 1222122 2234689999
Q ss_pred HHHHHhhhhhhhcCCCC--C------cccEEEEe
Q 020186 272 LEAFTSFNGPDFYGLPR--N------TSKIKLTK 297 (329)
Q Consensus 272 ~v~~~s~nPAkifgl~~--~------dADlvi~~ 297 (329)
+++.++.|||+++|+.. | +|||+||+
T Consensus 305 al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d 338 (359)
T cd01309 305 ALKAITINPAKILGIEDRVGSLEPGKDADLVVWN 338 (359)
T ss_pred HHHHHHHHHHHHhCCCCCcccCCCCCccCEEEEC
Confidence 99999999999999942 3 79999994
No 84
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=97.84 E-value=0.00034 Score=68.08 Aligned_cols=48 Identities=10% Similarity=-0.092 Sum_probs=34.6
Q ss_pred cchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 020186 7 LPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT 56 (329)
Q Consensus 7 ~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~ 56 (329)
..+++.+|||++++++.|.|+....+.++.+.+..++.+. +++++|.-
T Consensus 84 ~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~~a--~~~G~HlE 131 (382)
T PRK11170 84 QKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKHPN--QALGLHLE 131 (382)
T ss_pred HHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcCCC--eEEEEEee
Confidence 4457899999999999888876666666666554433222 78999874
No 85
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=97.84 E-value=0.0029 Score=58.64 Aligned_cols=229 Identities=14% Similarity=0.071 Sum_probs=116.0
Q ss_pred hcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCC-ccEEEEEEEEeCC-----CCCHHHHHHHHh--cCceeEEE
Q 020186 10 CSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPAS-SNFTPLMTLYLTD-----TTSPDEIKLARK--TGVVFAVK 81 (329)
Q Consensus 10 Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~-vd~~~~~~~~~~~-----~~~~~el~~l~~--~G~v~~~K 81 (329)
++.-||||++|--.+. ..+...+....-...+..-.+ +++++-+-+..++ +-..+++.++.+ .-.+.|.|
T Consensus 81 ga~~GvTTvVDAGSaG--aanf~gF~r~vie~Sr~RI~Aflnvs~~Gl~a~nE~~d~~nid~d~i~aa~reh~d~ivGlK 158 (386)
T COG3964 81 GAPNGVTTVVDAGSAG--AANFDGFYRTVIEASRVRIKAFLNVSPPGLTASNELYDPDNIDEDKIHAAFREHRDVIVGLK 158 (386)
T ss_pred cccCCceEEEecCCcC--ccchhhHHHHhhcchhheeeeeeeccCcceeeehhhCChhhCCHHHHHHHHHhCcCcEEEEE
Confidence 4678999999986333 234443333222111110011 3544433211111 112344555544 24577999
Q ss_pred EeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecC--
Q 020186 82 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-- 159 (329)
Q Consensus 82 ~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvS-- 159 (329)
+-+.... .+..++.- +..+++.++.+++|+|+|-.++... ..|....- +.-=.|.|.=
T Consensus 159 vR~s~~~-~g~~GitP----l~la~~ia~~~klPlmvHigePp~~----~dEvlerL-----------~~GDIitHcfng 218 (386)
T COG3964 159 VRVSTED-IGEYGITP----LTLALRIANDLKLPLMVHIGEPPVL----MDEVLERL-----------RRGDIITHCFNG 218 (386)
T ss_pred EEeeecc-ccccCCch----HHHHHHHHhhcCCceEEecCCCCcc----HHHHHHhc-----------cCCceeeeeccC
Confidence 9874321 12234433 6677888889999999999886421 12221111 1111233432
Q ss_pred --------CHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCC-CCeEEec
Q 020186 160 --------TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS-RKFFLGT 230 (329)
Q Consensus 160 --------t~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~-Id~~i~S 230 (329)
...-...+++|++.-|-.++.- + +..+-++ --| .++.+|. -| +|+|
T Consensus 219 kpn~~l~~dg~vr~~vrra~erGV~fD~gh-------------G-~asfsf~------vAr----~aia~GllP~-~ISS 273 (386)
T COG3964 219 KPNTILTDDGVVRAEVRRARERGVIFDAGH-------------G-RASFSFN------VAR----RAIANGLLPD-IISS 273 (386)
T ss_pred CCCCccccchhHHHHHHHHHhcceEEEccC-------------C-cceeeHH------HHH----HHHhcCCCcc-eeec
Confidence 2233344555544222222210 1 1122221 122 3455565 46 9999
Q ss_pred CCCCCCcCcccccCCcCCccchhHHHHHHH-HHHHhcCCHHHHHHHHhhhhhhhcCCCC-C------cccEEEE
Q 020186 231 DSAPHERGRKECACGCAGIYNAPVALSLYA-KVFEEMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLT 296 (329)
Q Consensus 231 DHaPh~~~eK~~~~~~~Gi~~~e~~lpll~-~~~~~~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi~ 296 (329)
|=-.|+ |- .+--+-++... ..+.-..+|+++++..+.|||..+|++. | +||++||
T Consensus 274 Dlh~~~---~~--------n~Pv~dla~~mSKllalgmpl~~Vi~avT~npA~~i~l~~~gtLa~G~~aD~tvf 336 (386)
T COG3964 274 DLHTIT---KL--------NGPVYDLAWIMSKLLALGMPLTDVINAVTHNPAVLIGLAEIGTLAPGAFADITVF 336 (386)
T ss_pred cceeee---ec--------CchHHHHHHHHHHHHHcCCcHHHHHHHHhcCHHHHhCccccCccCCCcccceEEE
Confidence 955554 11 11001222222 2333467999999999999999999964 3 7999999
No 86
>PRK05985 cytosine deaminase; Provisional
Probab=97.83 E-value=0.0013 Score=64.11 Aligned_cols=233 Identities=14% Similarity=0.121 Sum_probs=112.7
Q ss_pred cchhcccCccEEEECCCCCCC--CCcHHHHHHHHHHHHhhCCCCccEEEEEEEE----eCCCCCHHHHHHHHhcCceeEE
Q 020186 7 LPICSVSHYGRAIVMPNLKPP--ITTTAAAVAYRESILKALPASSNFTPLMTLY----LTDTTSPDEIKLARKTGVVFAV 80 (329)
Q Consensus 7 ~~~Aa~GGvTtvidmPnt~p~--~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~----~~~~~~~~el~~l~~~G~v~~~ 80 (329)
+..+...|+|+|-+|-+..|. ....+.+.+..+..+ .. +++.+.. +. .......+-+++..+.|+ .+
T Consensus 104 ~~~~l~~G~t~vr~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~v~-~~~~g~~~~~~~~~ll~~~l~~g~--~~ 176 (391)
T PRK05985 104 ARAAAAAGTTAMRSHVDVDPDAGLRHLEAVLAARETLR--GL--IDIQIVA-FPQSGVLSRPGTAELLDAALRAGA--DV 176 (391)
T ss_pred HHHHHhcCcceEEeeEccCCCcccchHHHHHHHHHHhh--Cc--ccEEEEe-ccCccccCCcCHHHHHHHHHHcCC--CE
Confidence 556788999999888654443 222332222222221 11 4443321 10 011111234666666663 11
Q ss_pred EEeeccccccCC-CCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCC--eEEEEe
Q 020186 81 KLYPAGATTNSQ-DGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQL--KVVMEH 157 (329)
Q Consensus 81 K~f~~~~~~~~~-~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~--~lhi~H 157 (329)
.- .+.... ....+ +.|.++++.+++.|.++.+|...... .. ...+.+.+ ..+...|. ++++.|
T Consensus 177 --~g--g~~p~~~~~~~~--~~l~~~~~~A~~~g~~i~~Hv~e~~d---~~---~~~~~~~~--e~~~~~g~~~~~~i~H 242 (391)
T PRK05985 177 --VG--GLDPAGIDGDPE--GQLDIVFGLAERHGVGIDIHLHEPGE---LG---AFQLERIA--ARTRALGMQGRVAVSH 242 (391)
T ss_pred --Ee--CCCCCCcCCCHH--HHHHHHHHHHHHhCCCcEEeeCCCCC---cc---HHHHHHHH--HHHHHhCCCCCEehhh
Confidence 10 111111 11223 68899999999999999999753211 01 11222233 23333443 588999
Q ss_pred cCCH---------HHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEE
Q 020186 158 ITTM---------DAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFL 228 (329)
Q Consensus 158 vSt~---------~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i 228 (329)
..+- +.++++++++ ..|. +|+. . ..+ . +| +-+.+..|.-= .+
T Consensus 243 ~~~l~~~~~~~~~~~i~~lae~g-~~v~--~~~~----------~-~~~-~----~~---------~~~l~~~Gv~v-~l 293 (391)
T PRK05985 243 AFCLGDLPEREVDRLAERLAEAG-VAIM--TNAP----------G-SVP-V----PP---------VAALRAAGVTV-FG 293 (391)
T ss_pred hhhhhcCCHHHHHHHHHHHHHcC-CeEE--EeCC----------C-CCC-C----CC---------HHHHHHCCCeE-EE
Confidence 8642 3345555432 3332 2210 0 001 0 22 33344556653 89
Q ss_pred ecCCCC--CCcCcccccCCcCCccchhHHHHHHH-HHHHhcCCHHHHHHHHhhhhhhhcCCCC------CcccEEEEe
Q 020186 229 GTDSAP--HERGRKECACGCAGIYNAPVALSLYA-KVFEEMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK 297 (329)
Q Consensus 229 ~SDHaP--h~~~eK~~~~~~~Gi~~~e~~lpll~-~~~~~~~~l~~~v~~~s~nPAkifgl~~------~dADlvi~~ 297 (329)
|||+.. ++ |++ +..-++...-+.. ..+...-+++++.+..+.|||+.+|++. +.|||++++
T Consensus 294 GtD~~~~~~~------p~~--~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~~l~~G~~ADlvvld 363 (391)
T PRK05985 294 GNDGIRDTWW------PYG--NGDMLERAMLIGYRSGFRTDDELAAALDCVTHGGARALGLEDYGLAVGARADFVLVD 363 (391)
T ss_pred ecCCCCCCCc------CCC--CCcHHHHHHHHHHHHccCChHHHHHHHHHHcchhHHHhCCcccCCCCCCcCCEEEEC
Confidence 999742 11 111 1111221111111 1111112467899999999999999842 279999994
No 87
>PRK09230 cytosine deaminase; Provisional
Probab=97.79 E-value=0.0054 Score=60.58 Aligned_cols=168 Identities=12% Similarity=0.038 Sum_probs=90.7
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCH---------HHHHHHHcc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTM---------DAVKFVESC 170 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~---------~sl~~i~~a 170 (329)
+.+.++++.+++.|.++.+|+...... ..... ..+.+.+ ...-.+.++.+.|...- +.++++++
T Consensus 195 e~l~~~~~~A~~~g~~~~~H~~E~~~~-~~~~~--~~~~~~~---~~~gl~~~v~~~H~~~l~~~~~~~~~~~~~~La~- 267 (426)
T PRK09230 195 ESLHKAFALAQKYDRLIDVHCDEIDDE-QSRFV--ETVAALA---HREGMGARVTASHTTAMHSYNGAYTSRLFRLLKM- 267 (426)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCCCc-chHHH--HHHHHHH---HHhCCCCCEEEEecCchhcCCHHHHHHHHHHHHH-
Confidence 678999999999999999998643211 00001 1121221 11224557777777654 34555544
Q ss_pred cCCceEEEecchh-hhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCc
Q 020186 171 KEGFVAATVTPQH-LVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGI 249 (329)
Q Consensus 171 k~~~vt~Et~phh-L~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi 249 (329)
..+.+.+||.. +.|.. . ..--|.-|.-.. +.+.++.|.= ..|+||+.. .+|.+.|.
T Consensus 268 --~gv~vv~cP~sn~~l~~-~---------~~~~p~~~g~~p---i~~l~~aGv~-V~lGTD~~~-------d~~~~~~~ 324 (426)
T PRK09230 268 --SGINFVANPLVNIHLQG-R---------FDTYPKRRGITR---VKEMLEAGIN-VCFGHDDVF-------DPWYPLGT 324 (426)
T ss_pred --cCCeEEECcchhhhhcC-C---------CCCCCCCCCCcC---HHHHHHCCCe-EEEecCCCC-------CCCcCCCC
Confidence 46888999964 22221 1 001121122112 2344445743 489999731 12323344
Q ss_pred cchhHHHHHHHHHHHh-cC-CHHHHHHHHhhhhhhhcCCCC------CcccEEEEe
Q 020186 250 YNAPVALSLYAKVFEE-MG-ALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK 297 (329)
Q Consensus 250 ~~~e~~lpll~~~~~~-~~-~l~~~v~~~s~nPAkifgl~~------~dADlvi~~ 297 (329)
..+-..+-+.+..... .. +++++.++.+.||||.+|++. +.|||++++
T Consensus 325 ~d~~~~~~~~~~~~~~~~~~~~~~~l~maT~~gA~alg~~~~gle~G~~ADlv~~~ 380 (426)
T PRK09230 325 ANMLQVLHMGLHVCQLMGYGQINDGLNLITTHSARTLNLQDYGIEVGNPANLIILP 380 (426)
T ss_pred CCHHHHHHHHHHHHhhCChhhHHHHHHHHhcchhHHhCCCCcCCCCCCcCCEEEEe
Confidence 3321111111111111 11 367899999999999999842 279999995
No 88
>PRK10027 cryptic adenine deaminase; Provisional
Probab=97.78 E-value=0.0024 Score=65.45 Aligned_cols=221 Identities=11% Similarity=0.029 Sum_probs=116.1
Q ss_pred cchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE--EeCC--C-----CCHHHHHHHHhcCce
Q 020186 7 LPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTL--YLTD--T-----TSPDEIKLARKTGVV 77 (329)
Q Consensus 7 ~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~--~~~~--~-----~~~~el~~l~~~G~v 77 (329)
+.+|+.||+|||++||++.|.....+.++...+.+.+ .+ .++++..-. .... + -..+++.++.+..-+
T Consensus 104 a~aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~-~p--~~~~~~~ps~vpa~~~~Et~Ga~~~~~~~~~~l~~~~v 180 (588)
T PRK10027 104 ETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQ-AR--QNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQV 180 (588)
T ss_pred HHHHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhh-CC--CeeEEeecccCcCCcccccCCCcCCHHHHHHHhcCCCc
Confidence 3468899999999999999999999988877776554 33 565543211 0001 1 134577777764334
Q ss_pred eEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEe
Q 020186 78 FAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEH 157 (329)
Q Consensus 78 ~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~H 157 (329)
.+.==.|++. +....|. +.+.++. .+ .|+++-=||=--+ ...+.. +++. |.. =+|
T Consensus 181 ~glgEvMn~~----~V~~~d~-~~~~ki~-~~--~~~~idGH~p~l~---------g~~L~a----y~aa--Gi~--sDH 235 (588)
T PRK10027 181 TGLAEMMDYP----GVISGQN-ALLDKLD-AF--RHLTLDGHCPGLG---------GKELNA----YIAA--GIE--NCH 235 (588)
T ss_pred eeEEeccCcc----ccccCCH-HHHHHHH-Hh--CCCceECCCCCCC---------hHHHHH----HHHc--CCC--CCc
Confidence 3442234331 1111243 4555544 33 5777666654211 112222 2221 332 334
Q ss_pred cC--CHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcC--CCCeEEecCCC
Q 020186 158 IT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG--SRKFFLGTDSA 233 (329)
Q Consensus 158 vS--t~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G--~Id~~i~SDHa 233 (329)
-+ -.|+++-+|. -.+.. + ++ |+. ..|-++|..++.+- .- ++++||-.
T Consensus 236 E~~t~eea~eklr~----Gm~v~-------i------Re--gS~---------~~nl~~l~~~~~~~~~~~-~~l~TDd~ 286 (588)
T PRK10027 236 ESYQLEEGRRKLQL----GMSLM-------I------RE--GSA---------ARNLNALAPLINEFNSPQ-CMLCTDDR 286 (588)
T ss_pred ccCCHHHHHHHHHC----CCEEE-------E------eC--Ccc---------ccCHHHHHHHhhccCCCe-EEEEcCCC
Confidence 33 4555555552 12222 1 11 221 12334455544331 11 36777743
Q ss_pred -CCCcCcccccCCcCCccchhHHHHHHH-HHHH-hcCCHHHHHHHHhhhhhhhcCCC-CC------cccEEEEe
Q 020186 234 -PHERGRKECACGCAGIYNAPVALSLYA-KVFE-EMGALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTK 297 (329)
Q Consensus 234 -Ph~~~eK~~~~~~~Gi~~~e~~lpll~-~~~~-~~~~l~~~v~~~s~nPAkifgl~-~~------dADlvi~~ 297 (329)
|...-++ | .+.... .... ..+++++.+++.|.|||+.||++ .| .|||++++
T Consensus 287 ~~~~l~~~-------G------hi~~~vr~av~~~Gi~~~~Ai~mAT~nPA~~lgl~d~G~IapG~~ADlvvld 347 (588)
T PRK10027 287 NPWEIAHE-------G------HIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLNHLGLLAPGKQADIVLLS 347 (588)
T ss_pred ChHHHHhc-------c------CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCcccCCCCcCCEEEEc
Confidence 2111111 1 122222 2233 36799999999999999999996 34 69999994
No 89
>PRK08204 hypothetical protein; Provisional
Probab=97.64 E-value=0.0071 Score=59.91 Aligned_cols=155 Identities=15% Similarity=0.139 Sum_probs=90.0
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecC--CHHHHHHHHcccCCceEE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAA 177 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvS--t~~sl~~i~~ak~~~vt~ 177 (329)
+.+.++++.+++.|.++.+|+-....... ...+.... -+...+.+..|.|.. +.+.++.+++ ..++.
T Consensus 201 e~l~~~~~~A~~~g~~v~~H~~e~~~~~~-----~~~~~~l~---~~g~~~~~~~i~H~~~~~~~~~~~la~---~g~~v 269 (449)
T PRK08204 201 EVARADFRLARELGLPISMHQGFGPWGAT-----PRGVEQLH---DAGLLGPDLNLVHGNDLSDDELKLLAD---SGGSF 269 (449)
T ss_pred HHHHHHHHHHHHcCCcEEEEEcCCCcccC-----CCHHHHHH---HCCCCCCCeEEEecCCCCHHHHHHHHH---cCCCE
Confidence 77889999999999999999842211000 01122211 123446677788877 5667777765 35666
Q ss_pred EecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHH
Q 020186 178 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALS 257 (329)
Q Consensus 178 Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lp 257 (329)
-+||.+-. +. +.. .||++ +.+..|.-= .+|||+.+... .. .-.+..+.
T Consensus 270 ~~~P~~~~-----~~----g~~---~~~~~---------~~~~~Gv~v-~lGtD~~~~~~---------~~-~~~~~~~a 317 (449)
T PRK08204 270 SVTPEIEM-----MM----GHG---YPVTG---------RLLAHGVRP-SLGVDVVTSTG---------GD-MFTQMRFA 317 (449)
T ss_pred EEChHHHh-----hh----cCC---CCcHH---------HHHhcCCce-eeccccCCCCC---------cC-HHHHHHHH
Confidence 78996421 11 111 24432 334557653 89999754311 00 00111222
Q ss_pred HHHHHH---------------HhcCCHHHHHHHHhhhhhhhcCCCC--C------cccEEEEe
Q 020186 258 LYAKVF---------------EEMGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTK 297 (329)
Q Consensus 258 ll~~~~---------------~~~~~l~~~v~~~s~nPAkifgl~~--~------dADlvi~~ 297 (329)
+..... ...++..++++..+.|+|+.+|+.. | .|||+|+|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~ADlvvld 380 (449)
T PRK08204 318 LQAERARDNAVHLREGGMPPPRLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQADLVLID 380 (449)
T ss_pred HHHHHhhcccccccccccCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEc
Confidence 211110 1246889999999999999999832 3 69999995
No 90
>PRK12393 amidohydrolase; Provisional
Probab=97.55 E-value=0.053 Score=54.04 Aligned_cols=154 Identities=14% Similarity=0.141 Sum_probs=86.7
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHH-----HHHHHH--hcCCCeEEEEecC--CHHHHHHHHcc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTI-----LQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC 170 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~-----~~~~la--~~~~~~lhi~HvS--t~~sl~~i~~a 170 (329)
+.+.++++.+++.|.++.+|+.... .|.+...+. +. .+. ...+.++.+.|.. +.+.++++++
T Consensus 218 e~l~~~~~~a~~~g~~~~~H~~e~~-------~~~~~~~~~~g~~~~~-~l~~~g~l~~~~~~~H~~~l~~~d~~~la~- 288 (457)
T PRK12393 218 ELLREVARAARGMGLRLHSHLSETV-------DYVDFCREKYGMTPVQ-FVAEHDWLGPDVWFAHLVKLDAEEIALLAQ- 288 (457)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCH-------HHHHHHHHHhCCCHHH-HHHHcCCCCCCeEEEEEecCCHHHHHHHHH-
Confidence 7888999999999999999996321 111111000 00 111 1234454444443 5667777775
Q ss_pred cCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCcc
Q 020186 171 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 250 (329)
Q Consensus 171 k~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~ 250 (329)
..+.+-.||.. +.. +|. -.||+ .+.+..|.-= .+|||..+.. +-.
T Consensus 289 --~g~~v~~~P~s-----n~~----lg~---g~~~~---------~~~~~~Gv~v-~lGtD~~~~~-----------~~~ 333 (457)
T PRK12393 289 --TGTGIAHCPQS-----NGR----LGS---GIAPA---------LAMEAAGVPV-SLGVDGAASN-----------ESA 333 (457)
T ss_pred --cCCeEEECchh-----hhh----hcc---cCCCH---------HHHHHCCCeE-EEecCCcccC-----------CCc
Confidence 46777888842 111 121 12443 2345557654 8999964311 111
Q ss_pred ch--hHHHHHHHHHHH---hcCCHHHHHHHHhhhhhhhcCCCC-C------cccEEEEe
Q 020186 251 NA--PVALSLYAKVFE---EMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK 297 (329)
Q Consensus 251 ~~--e~~lpll~~~~~---~~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi~~ 297 (329)
.+ +..+..+..... ..+++++++++++.|||+++|+++ | .|||+|+|
T Consensus 334 d~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~T~~~A~~l~~~~~G~l~~G~~ADlvv~d 392 (457)
T PRK12393 334 DMLSEAHAAWLLHRAEGGADATTVEDVVHWGTAGGARVLGLDAIGTLAVGQAADLAIYD 392 (457)
T ss_pred cHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHhHHHHHHhCCCCCCCcCCCCcCCEEEEe
Confidence 11 111111111111 137899999999999999999853 3 69999994
No 91
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=97.53 E-value=0.0051 Score=57.76 Aligned_cols=169 Identities=17% Similarity=0.186 Sum_probs=99.9
Q ss_pred HHHHHHHHhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhH--HHHHHHHHHHH
Q 020186 65 PDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFD--REKVFIDTILQ 142 (329)
Q Consensus 65 ~~el~~l~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~--~E~~av~~~~~ 142 (329)
..|++..+..+.+.++|+.+... +. -.++ ..++.+++.++++|+|+.+|........+... +-...+..
T Consensus 115 ~~E~er~v~~~gf~g~~l~p~~~----~~-~~~~-~~~~pi~~~a~~~gvpv~ihtG~~~~~~~~~~~~~~p~~~~~--- 185 (293)
T COG2159 115 AEELERRVRELGFVGVKLHPVAQ----GF-YPDD-PRLYPIYEAAEELGVPVVIHTGAGPGGAGLEKGHSDPLYLDD--- 185 (293)
T ss_pred HHHHHHHHHhcCceEEEeccccc----CC-CCCC-hHHHHHHHHHHHcCCCEEEEeCCCCCCcccccCCCCchHHHH---
Confidence 34788887753356999976421 11 1233 67899999999999999999997643211111 11112222
Q ss_pred HHHHhcCCCeEEEEecC--CHHHHHHHHcccC-CceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHH
Q 020186 143 PLIQRLPQLKVVMEHIT--TMDAVKFVESCKE-GFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAV 219 (329)
Q Consensus 143 ~~la~~~~~~lhi~HvS--t~~sl~~i~~ak~-~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al 219 (329)
.+.+..+.++.+.|.. -+--.+.+..+++ .+++.|++-. ..|+-+| .+|+-+
T Consensus 186 -va~~fP~l~IVl~H~G~~~p~~~~a~~~a~~~~nvy~d~s~~----------------~~~~~~~--------~~~~~~ 240 (293)
T COG2159 186 -VARKFPELKIVLGHMGEDYPWELEAIELAYAHPNVYLDTSGV----------------RPKYFAP--------PLLEFL 240 (293)
T ss_pred -HHHHCCCCcEEEEecCCCCchhHHHHHHHHhCCCceeeeecc----------------ccccCCh--------HHHHHH
Confidence 3457789999999998 3333333333333 5677776421 1222233 344443
Q ss_pred Hc---CCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHHHHHhcCCHHHHHHHHhhhhhhhcCCC
Q 020186 220 TS---GSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP 287 (329)
Q Consensus 220 ~~---G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~~~~~~l~~~v~~~s~nPAkifgl~ 287 (329)
.+ ..| +.||| .|+...++. + .......++-+..-+++-.|++|++|+.
T Consensus 241 ~~~~~dki--lFGSD-~P~~~~~~~--------------l---~~~~~l~l~~e~k~kiL~~NA~rll~l~ 291 (293)
T COG2159 241 KELGPDKI--LFGSD-YPAIHPEVW--------------L---AELDELGLSEEVKEKILGENAARLLGLD 291 (293)
T ss_pred HhcccCeE--EecCC-CCCcCHHHH--------------H---HHHHhcCCCHHHHHHHHHHhHHHHhCcC
Confidence 33 444 67999 566432221 1 1122235566778889999999999983
No 92
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=97.53 E-value=0.0088 Score=57.73 Aligned_cols=167 Identities=14% Similarity=0.069 Sum_probs=88.0
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCC--CeEEEEecCCHH------HHHHHHccc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ--LKVVMEHITTMD------AVKFVESCK 171 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~--~~lhi~HvSt~~------sl~~i~~ak 171 (329)
+.+.++++.+++.|.++.+|+...... .. ..+.+.+ ..++..| .++.+.|..... ..+.++..+
T Consensus 189 e~l~~~~~~A~~~g~~v~~H~~e~~~~-~~-----~~~~~~~--~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~ 260 (398)
T cd01293 189 ESLDTLFELAQEHGLDIDLHLDETDDP-GS-----RTLEELA--EEAERRGMQGRVTCSHATALGSLPEAEVSRLADLLA 260 (398)
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCCCCc-ch-----hHHHHHH--HHHHHhCCCCCEEeeecchhhcCCHHHHHHHHHHHH
Confidence 788899999999999999998643210 00 1111222 2233334 367788876432 123333333
Q ss_pred CCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccc
Q 020186 172 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN 251 (329)
Q Consensus 172 ~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~ 251 (329)
+..+....||..-...... . +..|. + .....+-+.+..|.- +.++||..+- ++...|...
T Consensus 261 ~~g~~v~~~p~s~~~l~~~-~--------~~~~~-~--~~~~~~~~~~~~Gv~-v~lGTD~~~~-------~~~~~~~~~ 320 (398)
T cd01293 261 EAGISVVSLPPINLYLQGR-E--------DTTPK-R--RGVTPVKELRAAGVN-VALGSDNVRD-------PWYPFGSGD 320 (398)
T ss_pred HcCCeEEeCCCcchhhccc-c--------cCCCC-C--CCCCcHHHHHHCCCe-EEECCCCCCC-------CCcCCCCCC
Confidence 3466777888643211000 0 00111 1 111234455566765 4899998521 111112222
Q ss_pred hhHHHHHHHH-HHHhcC----CHHHHHHHHhhhhhhhcCCCCC------cccEEEEe
Q 020186 252 APVALSLYAK-VFEEMG----ALDKLEAFTSFNGPDFYGLPRN------TSKIKLTK 297 (329)
Q Consensus 252 ~e~~lpll~~-~~~~~~----~l~~~v~~~s~nPAkifgl~~~------dADlvi~~ 297 (329)
.+..+.. ....++ +.+++.+..+.|+|+.+|+..| .|||+++|
T Consensus 321 ---~~~~~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~G~l~~Gk~ADlv~~d 374 (398)
T cd01293 321 ---MLEVANLAAHIAQLGTPEDLALALDLITGNAARALGLEDYGIKVGCPADLVLLD 374 (398)
T ss_pred ---HHHHHHHHHHHHcCCChhhHHHHHHhcChhhhhhcCCcCcccccCCcceEEEEC
Confidence 1222211 111122 3478999999999999997322 79999994
No 93
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=97.52 E-value=0.013 Score=54.58 Aligned_cols=156 Identities=15% Similarity=0.081 Sum_probs=80.4
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHcccCCceEEEe
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATV 179 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~sl~~i~~ak~~~vt~Et 179 (329)
..+.+.++.++++|.||++|+.+... + ...+.+.+ .-......++.|.|.-.....+.++++.+..++.+.
T Consensus 136 ~~f~~~~~lA~~~~~Pv~iH~~~~~~------~-~~~~l~~l--~~~g~~~~~~vi~H~~~~~~~~~~~~~~~~G~~i~~ 206 (293)
T cd00530 136 KVLRAAARAQKETGVPISTHTQAGLT------M-GLEQLRIL--EEEGVDPSKVVIGHLDRNDDPDYLLKIAALGAYLEF 206 (293)
T ss_pred HHHHHHHHHHHHHCCeEEEcCCCCcc------c-cHHHHHHH--HHcCCChhheEEeCCCCCCCHHHHHHHHhCCCEEEe
Confidence 46778899999999999999986410 0 01111222 111112234678899521133333333222333333
Q ss_pred cchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCC-eEEecCCCCCCcCcccccCCcCCccchhHHHHH
Q 020186 180 TPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSL 258 (329)
Q Consensus 180 ~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id-~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpl 258 (329)
+.--. + . . .-.|| .....+.+.++++.|-.| ++++|| +|+...... . + +-.+....+..
T Consensus 207 ~~~~~-~----------~-~-~~~~~--~~~~~~~l~~~~~~~~~d~ill~TD-~p~~~~~~~-~-~--~~~~~~~~~~~ 266 (293)
T cd00530 207 DGIGK-D----------K-I-FGYPS--DETRADAVKALIDEGYGDRLLLSHD-VFRKSYLEK-R-Y--GGHGYDYILTR 266 (293)
T ss_pred CCCCc-c----------c-c-cCCCC--HHHHHHHHHHHHHCCCcCCEEEeCC-cCchhhhhh-c-c--CCCChHHHHHH
Confidence 31000 0 0 0 00111 133455688888888664 367888 355322100 0 1 11222223333
Q ss_pred HHHHH-HhcCCHHHHHHHHhhhhhhhc
Q 020186 259 YAKVF-EEMGALDKLEAFTSFNGPDFY 284 (329)
Q Consensus 259 l~~~~-~~~~~l~~~v~~~s~nPAkif 284 (329)
+...+ .+.++.+.+.+++..||+|+|
T Consensus 267 ~~~~~~~~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 267 FIPRLRERGVTEEQLDTILVENPARFL 293 (293)
T ss_pred HHHHHHHcCCCHHHHHHHHHHCHHHhC
Confidence 33333 346799999999999999987
No 94
>PRK09228 guanine deaminase; Provisional
Probab=97.45 E-value=0.053 Score=53.67 Aligned_cols=154 Identities=14% Similarity=0.068 Sum_probs=91.0
Q ss_pred HHHHHHHHHhhHc-CCcEEEecCCCCCCCChhHHHHHHHHH-------HHHHHHH--hcCCCeEEEEecC--CHHHHHHH
Q 020186 100 GKCVHVLEEMVEQ-NMPLLVHGEVTDPIVDIFDREKVFIDT-------ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFV 167 (329)
Q Consensus 100 ~~l~~~l~~~~~~-~~~v~vHaEd~~~~~~~~~~E~~av~~-------~~~~~la--~~~~~~lhi~HvS--t~~sl~~i 167 (329)
+.+.++.+.+++. |.++.+|...... |...+.+ .+. .+. ...+.++.+.|.. +.+.++++
T Consensus 211 ~~l~~~~~lA~~~~~~~i~~Hl~E~~~-------e~~~~~~~~g~~~~~~~-~l~~~G~l~~~~~~~H~~~l~~~~~~~l 282 (433)
T PRK09228 211 EQLEAAGALAREHPDVWIQTHLSENLD-------EIAWVKELFPEARDYLD-VYERYGLLGPRAVFAHCIHLEDRERRRL 282 (433)
T ss_pred HHHHHHHHHHHHCCCCceEEeecCChh-------HHHHHHHHcCCCCCHHH-HHHHcCCCCCCeEEEeccCCCHHHHHHH
Confidence 7888999999997 9999999864421 1111111 010 111 2245677888877 56677777
Q ss_pred HcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcC
Q 020186 168 ESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCA 247 (329)
Q Consensus 168 ~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~ 247 (329)
++ ..+.+..||..= ... +.+ .+| +.+.+..|.-- .+|||..+-.
T Consensus 283 a~---~g~~v~~~P~sn-----~~l--g~g-----~~~---------~~~~~~~Gv~v-~lGtD~~~~~----------- 326 (433)
T PRK09228 283 AE---TGAAIAFCPTSN-----LFL--GSG-----LFD---------LKRADAAGVRV-GLGTDVGGGT----------- 326 (433)
T ss_pred HH---cCCeEEECCccH-----Hhh--cCC-----CcC---------HHHHHHCCCeE-EEecCCCCCC-----------
Confidence 76 356778898631 111 111 233 33455568665 8999963210
Q ss_pred Cccchh-HHHHHHHHHHH-hcCCHHHHHHHHhhhhhhhcCCCC--C------cccEEEEe
Q 020186 248 GIYNAP-VALSLYAKVFE-EMGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTK 297 (329)
Q Consensus 248 Gi~~~e-~~lpll~~~~~-~~~~l~~~v~~~s~nPAkifgl~~--~------dADlvi~~ 297 (329)
...-++ ..+.+...... ..++.++++++.+.|||+++|++. | .|||++++
T Consensus 327 ~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~~A~~lg~~~~~G~l~~Gk~ADlvv~d 386 (433)
T PRK09228 327 SFSMLQTMNEAYKVQQLQGYRLSPFQAFYLATLGGARALGLDDRIGNLAPGKEADFVVLD 386 (433)
T ss_pred CCCHHHHHHHHHHHhhcccCCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCCCCEEEEc
Confidence 111111 11111111112 246899999999999999999852 3 69999994
No 95
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=97.44 E-value=0.013 Score=57.97 Aligned_cols=155 Identities=14% Similarity=0.156 Sum_probs=88.3
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHH-HHHHH----HHHHHH--hcCCCeEEEEecC--CHHHHHHHHcc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKV-FIDTI----LQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC 170 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~-av~~~----~~~~la--~~~~~~lhi~HvS--t~~sl~~i~~a 170 (329)
+.+.++++.+++.|.++.+|+.... .|.. ++.+. +. .+. ...+.+..+.|.. +.+.++.+++
T Consensus 202 ~~l~~~~~~A~~~g~~v~~H~~e~~-------~~~~~~~~~~g~~~~~-~l~~~g~l~~r~~~~H~~~l~~~~~~~la~- 272 (443)
T PRK09045 202 ENLERIRTLAEQLDLPIHIHLHETA-------QEIADSLKQHGQRPLA-RLARLGLLGPRLIAVHMTQLTDAEIALLAE- 272 (443)
T ss_pred HHHHHHHHHHHHcCCCEEEeecCcH-------HHHHHHHHHhCCCHHH-HHHHcCCCCCCeEEEEecCCCHHHHHHHHH-
Confidence 7899999999999999999985221 1111 11110 10 111 1234444455554 4566777765
Q ss_pred cCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCcc
Q 020186 171 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 250 (329)
Q Consensus 171 k~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~ 250 (329)
..++.-.||..- +. .+. -.+|+ ..| +..|..- .++||+.+... +..
T Consensus 273 --~g~~i~~~P~~~------~~---~~~---~~~~~------~~l---~~~Gv~v-~lGtD~~~~~~----------~~~ 318 (443)
T PRK09045 273 --TGCSVVHCPESN------LK---LAS---GFCPV------AKL---LQAGVNV-ALGTDGAASNN----------DLD 318 (443)
T ss_pred --cCCeEEECHHHH------hh---hcc---CCCcH------HHH---HHCCCeE-EEecCCCCCCC----------Ccc
Confidence 356666788421 11 010 01222 233 4457775 99999864211 111
Q ss_pred -chhHHHHHHHHHH----HhcCCHHHHHHHHhhhhhhhcCCC-C-C------cccEEEEe
Q 020186 251 -NAPVALSLYAKVF----EEMGALDKLEAFTSFNGPDFYGLP-R-N------TSKIKLTK 297 (329)
Q Consensus 251 -~~e~~lpll~~~~----~~~~~l~~~v~~~s~nPAkifgl~-~-~------dADlvi~~ 297 (329)
--|..+..++... ...+++++++++++.|||+.+|++ + | .|||+|+|
T Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ADlvv~d 378 (443)
T PRK09045 319 LFGEMRTAALLAKAVAGDATALPAHTALRMATLNGARALGLDDEIGSLEPGKQADLVAVD 378 (443)
T ss_pred HHHHHHHHHHHHhhccCCCCcCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEe
Confidence 1133444333221 124799999999999999999984 2 3 69999994
No 96
>PRK14085 imidazolonepropionase; Provisional
Probab=97.41 E-value=0.0027 Score=61.63 Aligned_cols=145 Identities=12% Similarity=0.036 Sum_probs=88.7
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCC--eEEEEecCCHHHHHHHHcccCCceEE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQL--KVVMEHITTMDAVKFVESCKEGFVAA 177 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~--~lhi~HvSt~~sl~~i~~ak~~~vt~ 177 (329)
+.+.++++.+++.|.++.+|+..... ...+...+ . .|. --|.+++ +.+.++.++++ .+..
T Consensus 207 ~~l~~~~~~a~~~g~~v~~H~~~~~~--------~~~v~~~~--~----~g~~~i~H~~~l-~~~~~~~la~~---gv~~ 268 (382)
T PRK14085 207 DQSRRVLTAGRAAGLGLRVHGNQLGP--------GPGVRLAV--E----LGAASVDHCTYL-TDADVDALAGS---GTVA 268 (382)
T ss_pred HHHHHHHHHHHHcCCCeEEEeCcccC--------ChHHHHHH--H----cCCCcHHHhCCC-CHHHHHHHHHc---CCEE
Confidence 78999999999999999999974211 01122222 1 122 1244444 45667777653 4566
Q ss_pred EecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHH
Q 020186 178 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALS 257 (329)
Q Consensus 178 Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lp 257 (329)
.+||.+-+. . +.+ .|| +.+.+..|..- +++||+.|+..- + ..++
T Consensus 269 ~~~P~~~~~-----~--~~~-----~~~---------~~~l~~aGv~v-~lgsD~~~~~~~---------~-----~~~~ 312 (382)
T PRK14085 269 TLLPGAEFS-----T--RQP-----YPD---------ARRLLDAGVTV-ALASDCNPGSSY---------T-----SSMP 312 (382)
T ss_pred EECcHHHHh-----c--CCC-----Cch---------HHHHHHCCCcE-EEEeCCCCCCCh---------H-----HHHH
Confidence 678875321 1 001 122 44556668876 999998654310 1 1223
Q ss_pred HHHH-HH-HhcCCHHHHHHHHhhhhhhhcCCC-CC------cccEEEEec
Q 020186 258 LYAK-VF-EEMGALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTKI 298 (329)
Q Consensus 258 ll~~-~~-~~~~~l~~~v~~~s~nPAkifgl~-~~------dADlvi~~~ 298 (329)
.... .. ...++.++++++.+.|||+.+|++ .| .|||+|+|.
T Consensus 313 ~~~~~~~~~~~l~~~~al~~aT~~~A~~lg~~~~G~l~~G~~ADlvv~d~ 362 (382)
T PRK14085 313 FCVALAVRQMGMTPAEAVWAATAGGARALRRDDVGVLAVGARADLHVLDA 362 (382)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCCCcCCCCCCCEEEEcC
Confidence 2221 12 236899999999999999999984 23 699999953
No 97
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=97.33 E-value=0.00038 Score=64.88 Aligned_cols=64 Identities=17% Similarity=0.157 Sum_probs=49.4
Q ss_pred HHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHH--HHHhcCCHHHHHHHHhhhhhhhcCC-CCC-
Q 020186 214 AVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAK--VFEEMGALDKLEAFTSFNGPDFYGL-PRN- 289 (329)
Q Consensus 214 aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~--~~~~~~~l~~~v~~~s~nPAkifgl-~~~- 289 (329)
+-.+....|.+| +++||..|.+ +|...+. .....++|++.++++|.|||+.+|| ++|
T Consensus 285 sA~ela~~glLD-iLsSDY~P~S------------------Ll~A~F~La~~~~~~~lpqAvalvt~nPA~algl~DRG~ 345 (377)
T COG3454 285 SARELAQHGLLD-ILSSDYVPAS------------------LLHAAFRLADLGSNISLPQAVALVTKNPARALGLTDRGR 345 (377)
T ss_pred hHHHHHhCCcee-eecccCCcHH------------------HHHHHHHHhhhhcccCHHHHHHHhccCHHHhcCCCcccc
Confidence 445677889999 9999998875 3333222 2233569999999999999999999 555
Q ss_pred -----cccEEEE
Q 020186 290 -----TSKIKLT 296 (329)
Q Consensus 290 -----dADlvi~ 296 (329)
+|||+.+
T Consensus 346 Ia~GlrADlv~v 357 (377)
T COG3454 346 IAPGLRADLVRV 357 (377)
T ss_pred cccccccceEEE
Confidence 7999987
No 98
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.28 E-value=0.0079 Score=59.03 Aligned_cols=141 Identities=16% Similarity=0.166 Sum_probs=80.3
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecC--CHHHHHHHHc--ccCCce
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVES--CKEGFV 175 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvS--t~~sl~~i~~--ak~~~v 175 (329)
+.++++++.+.+.|.++.+||+-.+ .+. +|-..|.. -+-|.. +.+..+++++ +- .++
T Consensus 220 ~e~~~~l~~a~~~g~~v~~HA~~~~-----------g~~------~A~~~g~~-s~~H~~~ld~~~~~~~a~~~~g-~~~ 280 (406)
T COG1228 220 EEIRAVLAAALKAGIPVKAHAHGAD-----------GIK------LAIRLGAK-SAEHGTLLDHETAALLAEKGAG-TPV 280 (406)
T ss_pred HHHHHHHHHHHHCCCceEEEecccc-----------hHH------HHHHhCcc-eehhhhhcCHhHHHHHhhccCC-Ccc
Confidence 6778899999999999999998542 121 22222222 122322 4556666654 21 111
Q ss_pred EEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHH
Q 020186 176 AATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVA 255 (329)
Q Consensus 176 t~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~ 255 (329)
.+..|-. .+.+.. .+++..-.++..|.- ++++|||-|-+. .. .
T Consensus 281 -~~l~p~~---------------~~~l~e-----~~~~~~~~l~~~GV~-vai~TD~~~~~~-----------~~----~ 323 (406)
T COG1228 281 -PVLLPRT---------------KFELRE-----LDYKPARKLIDAGVK-VAIGTDHNPGTS-----------HG----S 323 (406)
T ss_pred -ccccchh---------------hhhhhc-----ccchhHHHHHHCCCE-EEEEcCCCCCch-----------hh----H
Confidence 1211111 111111 112223344556776 499999965431 11 2
Q ss_pred HHHHHHH-HHhcCCHHHHHHHHhhhhhhhcCCCC--C------cccEEEE
Q 020186 256 LSLYAKV-FEEMGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLT 296 (329)
Q Consensus 256 lpll~~~-~~~~~~l~~~v~~~s~nPAkifgl~~--~------dADlvi~ 296 (329)
+.+.... +...++.++.++..+.||||.+|+.. | +|||+||
T Consensus 324 l~~~m~l~~~~gmtp~EaL~a~T~naA~alG~~~~~Gsle~Gk~ADlvv~ 373 (406)
T COG1228 324 LALEMALAVRLGMTPEEALKAATINAAKALGLADKVGSLEPGKDADLVVW 373 (406)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCccccccccCCCccCEEEE
Confidence 3332222 23348999999999999999999852 3 8999999
No 99
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=97.23 E-value=0.089 Score=52.09 Aligned_cols=152 Identities=11% Similarity=0.067 Sum_probs=87.8
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHH-----HHHHHHH--hcCCCeEEEEecC--CHHHHHHHHcc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC 170 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~-----~~~~~la--~~~~~~lhi~HvS--t~~sl~~i~~a 170 (329)
+.+.++++.+++.|.++.+|.-... .|...+.+ .+. .+. ...+-++.+.|.. +.+.++++++.
T Consensus 205 ~~l~~~~~lA~~~g~~i~~H~~E~~-------~e~~~~~~~~g~~~v~-~l~~~Gll~~~~~~~H~~~~~~~d~~~la~~ 276 (442)
T PRK07203 205 ATLEKCREAVKETGRGYHIHVAEGI-------YDVSDSHKKYGKDIVE-RLADFGLLGEKTLAAHCIYLSDEEIDLLKET 276 (442)
T ss_pred HHHHHHHHHHHHcCCcEEEEecCCh-------HHHHHHHHHcCCCHHH-HHHhCCCCCCCcEEEEeecCCHHHHHHHHhc
Confidence 7888999999999999999987542 11111110 110 111 2346677666765 56668888764
Q ss_pred cCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCcc
Q 020186 171 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 250 (329)
Q Consensus 171 k~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~ 250 (329)
.+.+-.||.- +.. .+. =.|| +++.+..|.-= .+|||-... .+.
T Consensus 277 ---g~~v~~~P~s------n~~---l~~---g~~p---------~~~~~~~Gv~v-~lGtD~~~~------------d~~ 319 (442)
T PRK07203 277 ---DTFVVHNPES------NMG---NAV---GYNP---------VLEMIKNGILL-GLGTDGYTS------------DMF 319 (442)
T ss_pred ---CCeEEECchh------hhh---ccc---CCCC---------HHHHHHCCCeE-EEcCCCCCc------------cHH
Confidence 4667778842 111 110 0244 34555667664 999995210 100
Q ss_pred chhHHHHHHHHHHHh---cCCHHHHHHHHhhhhhhhcC--CC-C-C------cccEEEEe
Q 020186 251 NAPVALSLYAKVFEE---MGALDKLEAFTSFNGPDFYG--LP-R-N------TSKIKLTK 297 (329)
Q Consensus 251 ~~e~~lpll~~~~~~---~~~l~~~v~~~s~nPAkifg--l~-~-~------dADlvi~~ 297 (329)
. |..+..+...... ..+++++.++.+.||||.+| +. + | .|||+++|
T Consensus 320 ~-~~~~a~~~~~~~~~~~~~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~~G~~ADlvv~d 378 (442)
T PRK07203 320 E-SYKVANFKHKHAGGDPNVGWPESPAMLFENNNKIAERYFGAKFGILEEGAKADLIIVD 378 (442)
T ss_pred H-HHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccCEEEEc
Confidence 0 2233332221111 23478899999999999988 31 1 2 79999994
No 100
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=97.18 E-value=0.029 Score=50.58 Aligned_cols=143 Identities=16% Similarity=0.161 Sum_probs=73.4
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHcccCCceEEEe
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATV 179 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~sl~~i~~ak~~~vt~Et 179 (329)
..+.+.++.+++.|++|.+|+.... .+ +..+ +.+....+.-|.|.-+ .+.+.+++..+..++.++
T Consensus 108 ~~~~~~~~~a~~~~~pv~iH~~~~~-------~~---~~~~----l~~~~~~~~~i~H~~~-~~~~~~~~~~~~g~~~~~ 172 (252)
T TIGR00010 108 EVFRAQLQLAEELNLPVIIHARDAE-------ED---VLDI----LREEKPKVGGVLHCFT-GDAELAKKLLDLGFYISI 172 (252)
T ss_pred HHHHHHHHHHHHhCCCeEEEecCcc-------HH---HHHH----HHhcCCCCCEEEEccC-CCHHHHHHHHHCCCeEee
Confidence 5677779999999999999998532 11 2222 2222112234557643 223333333213556665
Q ss_pred cchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHH
Q 020186 180 TPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLY 259 (329)
Q Consensus 180 ~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll 259 (329)
+.... .++.+.-.++++.+-.+.| +++||- |+-.... ..|-..-...++-+
T Consensus 173 ~~~~~---------------------~~~~~~~~~~i~~~~~dri--l~~TD~-p~~~~~~-----~~~~~~~p~~i~~~ 223 (252)
T TIGR00010 173 SGIVT---------------------FKNAKSLREVVRKIPLERL--LVETDS-PYLAPVP-----YRGKRNEPAFVRYT 223 (252)
T ss_pred ceeEe---------------------cCCcHHHHHHHHhCCHHHe--EecccC-CCCCCCC-----CCCCCCCChhHHHH
Confidence 53110 0111222234443322344 799996 4421100 01111111234433
Q ss_pred HHHH--HhcCCHHHHHHHHhhhhhhhcCC
Q 020186 260 AKVF--EEMGALDKLEAFTSFNGPDFYGL 286 (329)
Q Consensus 260 ~~~~--~~~~~l~~~v~~~s~nPAkifgl 286 (329)
...+ ...++.+.+.+++..||+|+|||
T Consensus 224 ~~~~a~~~g~~~~~~~~~~~~N~~~~~~~ 252 (252)
T TIGR00010 224 VEAIAEIKGMDVEELAQITTKNAKRLFGL 252 (252)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHhCc
Confidence 2222 23679999999999999999986
No 101
>PRK06380 metal-dependent hydrolase; Provisional
Probab=96.98 E-value=0.16 Score=49.71 Aligned_cols=159 Identities=13% Similarity=0.141 Sum_probs=87.4
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChh-HHHHH---HHHHHHHHHHHhcCCCeEEEEecC--CHHHHHHHHcccCC
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIF-DREKV---FIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEG 173 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~-~~E~~---av~~~~~~~la~~~~~~lhi~HvS--t~~sl~~i~~ak~~ 173 (329)
+.+.++++.+++.|.++.+|+..... ... ..+.. .+.. + .-....+.++-+.|.. +.+.++++++ .
T Consensus 186 e~l~~~~~~A~~~g~~v~~H~~e~~~--~~~~~~~~~g~~~ie~-~--~~~g~l~~~~~~~H~~~l~~~d~~~la~---~ 257 (418)
T PRK06380 186 ETYLKAKEIAEKYDTIMHMHLSETRK--EVYDHVKRTGERPVEH-L--EKIGFLNSKLIAAHCVWATYHEIKLLSK---N 257 (418)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcHH--HHHHHHHHhCCCHHHH-H--HHCCCCCCCeEEEEeecCCHHHHHHHHH---c
Confidence 78999999999999999999975421 000 00000 0111 1 1112234454444544 4666777765 4
Q ss_pred ceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccch-
Q 020186 174 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA- 252 (329)
Q Consensus 174 ~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~- 252 (329)
.+.+-.||.... . .+. .-.|| +.+.+..|.- ..+|||-.... +...-+
T Consensus 258 g~~v~~~P~sn~-----~----l~~--~g~~p---------~~~~~~~Gv~-v~lGTD~~~~~----------~~~d~~~ 306 (418)
T PRK06380 258 GVKVSWNSVSNF-----K----LGT--GGSPP---------IPEMLDNGIN-VTIGTDSNGSN----------NSLDMFE 306 (418)
T ss_pred CCEEEECHHHHH-----h----hcc--CCCCc---------HHHHHHCCCe-EEEcCCCCcCC----------CCcCHHH
Confidence 678888997421 1 111 01233 3344556754 48999952110 011111
Q ss_pred hHHHHHHHHHHH----hcCCHHHHHHHHhhhhhhhcCCCCC------cccEEEEe
Q 020186 253 PVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLPRN------TSKIKLTK 297 (329)
Q Consensus 253 e~~lpll~~~~~----~~~~l~~~v~~~s~nPAkifgl~~~------dADlvi~~ 297 (329)
+..+-+++.... ..++..++++..+.|+||.+|++.| .|||+++|
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~~G~l~~G~~ADlvv~d 361 (418)
T PRK06380 307 AMKFSALSVKNERWDASIIKAQEILDFATINAAKALELNAGSIEVGKLADLVILD 361 (418)
T ss_pred HHHHHHHHhhhccCCCCcCCHHHHHHHHHHHHHHHhCCCCCccCCCccCCEEEEe
Confidence 112211111111 1368899999999999999997433 79999994
No 102
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=96.91 E-value=0.057 Score=53.43 Aligned_cols=161 Identities=13% Similarity=0.108 Sum_probs=94.9
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHH-----HHHHHHH--hcCCCeEEEEecC--CHHHHHHHHcc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC 170 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~-----~~~~~la--~~~~~~lhi~HvS--t~~sl~~i~~a 170 (329)
+.|.++++.+++.|.++.+|+-... .|...+.+ .+. .+. ...+.++.+.|.. +.+.++++.+.
T Consensus 197 e~l~~~~~~A~~~g~~v~~H~~e~~-------~e~~~~~~~~g~~~~~-~l~~~Gll~~~~~~~H~~~l~~~d~~~la~~ 268 (435)
T PRK15493 197 ELLEECARIAVENQTMVHIHLSETE-------REVRDIEAQYGKRPVE-YAASCGLFKRPTVIAHGVVLNDNERAFLAEH 268 (435)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCH-------HHHHHHHHHhCCCHHH-HHHHcCCCCCCcEEEEeecCCHHHHHHHHHc
Confidence 7899999999999999999985431 11111111 010 112 2345566666665 67778888764
Q ss_pred cCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCcc
Q 020186 171 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 250 (329)
Q Consensus 171 k~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~ 250 (329)
.+++-.||..-+ .+ +.| .||++ +.+..|.- ..+|||..+- +. ...
T Consensus 269 ---g~~v~~~P~sn~----~l---~~g-----~~p~~---------~~~~~Gv~-v~lGtD~~~~--------~~--~~d 313 (435)
T PRK15493 269 ---DVRVAHNPNSNL----KL---GSG-----IANVK---------AMLEAGIK-VGIATDSVAS--------NN--NLD 313 (435)
T ss_pred ---CCeEEEChHHHH----HH---hcC-----cccHH---------HHHHCCCe-EEEccCcccc--------CC--CcC
Confidence 456667886421 11 111 23433 34445654 4899997431 00 111
Q ss_pred c-hhHHHHHHHHHHH----hcCCHHHHHHHHhhhhhhhcCCCC-C------cccEEEEe--cceeec
Q 020186 251 N-APVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK--IPWKVP 303 (329)
Q Consensus 251 ~-~e~~lpll~~~~~----~~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi~~--~~~~v~ 303 (329)
- -|..+++++.... ..+++++++++.+.|||+.+|+++ | .|||+++| ..+.+.
T Consensus 314 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~~~G~l~~G~~ADlvv~d~~~~~~~~ 380 (435)
T PRK15493 314 MFEEMRIATLLQKGIHQDATALPVETALTLATKGAAEVIGMKQTGSLEVGKCADFITIDPSNKPHLQ 380 (435)
T ss_pred HHHHHHHHHHHHhhccCCCCcCCHHHHHHHHhHHHHHHcCCCCCCccCCCCcCCEEEEcCCCCCCcC
Confidence 1 1344554443211 256899999999999999999853 3 69999995 345443
No 103
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=96.90 E-value=0.02 Score=57.51 Aligned_cols=152 Identities=16% Similarity=0.151 Sum_probs=86.1
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHH-----HHHHHHHh--cCCCeEEEEecC--CH---------
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQR--LPQLKVVMEHIT--TM--------- 161 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~-----~~~~~la~--~~~~~lhi~HvS--t~--------- 161 (329)
+.|.++++.+++.|.++.+|+-... .|...+.+ .+. .+.+ ..+.++.+.|.. +.
T Consensus 221 e~l~~~~~~A~~~g~~v~~H~~e~~-------~~~~~~~~~~g~~~~~-~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~ 292 (488)
T PRK06151 221 DLLRRTAAAARELGCPVRLHCAQGV-------LEVETVRRLHGTTPLE-WLADVGLLGPRLLIPHATYISGSPRLNYSGG 292 (488)
T ss_pred HHHHHHHHHHHHCCCcEEEEECCch-------HHHHHHHHHcCCCHHH-HHHHcCCCCCCcEEEEEEEcCCccccccCCH
Confidence 7899999999999999999994321 11111111 110 1111 223454444444 23
Q ss_pred HHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCccc
Q 020186 162 DAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE 241 (329)
Q Consensus 162 ~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~ 241 (329)
+.++.+++ ..+++-.||... .. ++. -.+|+ -+.+..|.- ..+|||..|..
T Consensus 293 ~~~~~la~---~g~~v~~~P~~~----~~-----~g~---~~~p~---------~~l~~~Gv~-v~lGtD~~~~~----- 342 (488)
T PRK06151 293 DDLALLAE---HGVSIVHCPLVS----AR-----HGS---ALNSF---------DRYREAGIN-LALGTDTFPPD----- 342 (488)
T ss_pred HHHHHHHh---cCCEEEECchhh----hh-----hcc---ccccH---------HHHHHCCCc-EEEECCCCCcc-----
Confidence 66777665 456677888421 11 121 12333 334555765 49999963310
Q ss_pred ccCCcCCccchhHHHHHHHHHHH----hcCCHHHHHHHHhhhhhhhcCCCC-C------cccEEEEe
Q 020186 242 CACGCAGIYNAPVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK 297 (329)
Q Consensus 242 ~~~~~~Gi~~~e~~lpll~~~~~----~~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi~~ 297 (329)
-+.. ..+.+...... ..+++++++++.+.|||+++|++. | .|||+|+|
T Consensus 343 ------~~~~--~~~~~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvvld 401 (488)
T PRK06151 343 ------MVMN--MRVGLILGRVVEGDLDAASAADLFDAATLGGARALGRDDLGRLAPGAKADIVVFD 401 (488)
T ss_pred ------HHHH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhCCCCCcccCCCCcCCEEEEe
Confidence 0111 12222222121 136899999999999999999853 4 69999995
No 104
>PRK06886 hypothetical protein; Validated
Probab=96.82 E-value=0.15 Score=48.72 Aligned_cols=237 Identities=16% Similarity=0.083 Sum_probs=118.2
Q ss_pred cchhcccCccEEEECCCCCC--CCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE---eCCCCCHHHHHHHHh-cCceeEE
Q 020186 7 LPICSVSHYGRAIVMPNLKP--PITTTAAAVAYRESILKALPASSNFTPLMTLY---LTDTTSPDEIKLARK-TGVVFAV 80 (329)
Q Consensus 7 ~~~Aa~GGvTtvidmPnt~p--~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~---~~~~~~~~el~~l~~-~G~v~~~ 80 (329)
+..+.+-|+|.|=-+.+..| .....+.+...++..+. . +|+.+.+ +. +......+-+.+..+ .+++ |-
T Consensus 75 l~~~~~~Gtt~iRtHvdvd~~~~l~~~~a~~~~r~~~~~--~--idlq~va-fPq~g~~~~~~~~l~~~al~~advv-GG 148 (329)
T PRK06886 75 IELMISQGVTAFGTFVDIDPICEDRAIIAAHKAREVYKH--D--IILKFAN-QTLKGVIEPTAKKWFDIGSEMVDMI-GG 148 (329)
T ss_pred HHHHHHcCcccEeeeeccCCCccccHHHHHHHHHHHhcC--c--ceEEEEe-cChhhccCccHHHHHHHHHHhCCEE-eC
Confidence 34566778888777776655 33445555444444332 2 7876642 10 011111122222211 2322 21
Q ss_pred EEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 020186 81 KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT 160 (329)
Q Consensus 81 K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt 160 (329)
- + .+.+.+....+ +.+..+|+.++++|+++-+|+.+... ....+.+.+.+. .+..-.+.|+-+.|..+
T Consensus 149 i--P--~~~~~~~~~~~--e~l~~~~~lA~~~g~~Id~Hlde~~~---~~~~~le~l~~~---~~~~Gl~grV~~sH~~~ 216 (329)
T PRK06886 149 L--P--YRDELDYGRGL--EAMDILLDTAKSLGKMVHVHVDQFNT---PKEKETEQLCDK---TIEHGMQGRVVAIHGIS 216 (329)
T ss_pred c--c--CCcCCCCCCCH--HHHHHHHHHHHHcCCCeEEeECCCCc---hhHHHHHHHHHH---HHHcCCCCCEEEEEecc
Confidence 0 1 11111112222 78999999999999999999885431 111122222211 12222345888888775
Q ss_pred HHH---------HHHHHcccCCceEEEecchh-hhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEec
Q 020186 161 MDA---------VKFVESCKEGFVAATVTPQH-LVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGT 230 (329)
Q Consensus 161 ~~s---------l~~i~~ak~~~vt~Et~phh-L~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~S 230 (329)
-.. ++++++ ..+.+=+||.- |+|+...-. -+...=-|| +.+.+..|.- ..+||
T Consensus 217 L~~~~~~~~~~~i~~La~---agi~Vv~~P~snl~l~~~~~~----~p~~rGv~p---------v~eL~~aGV~-V~lGt 279 (329)
T PRK06886 217 IGAHSKEYRYRLYQKMRE---ADMMVIACPMAWIDSNRKEDL----MPFHNALTP---------ADEMIPEGIT-VALGT 279 (329)
T ss_pred ccCcChhhHHHHHHHHHH---cCCeEEECchhhhhhcccccc----CcCCCCCCC---------HHHHHHCCCe-EEEec
Confidence 443 455554 45677778863 333321100 000111123 2244445765 48999
Q ss_pred CCCCCCcCcccccCCcCCccch-hHHHHHHHHHHHhcCCHHHHHHHHhhhhhhhcCCC
Q 020186 231 DSAPHERGRKECACGCAGIYNA-PVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP 287 (329)
Q Consensus 231 DHaPh~~~eK~~~~~~~Gi~~~-e~~lpll~~~~~~~~~l~~~v~~~s~nPAkifgl~ 287 (329)
|-..- ||.+.|-..+ |. +-++.. ..+..++.++.++.+.|+||.+|+.
T Consensus 280 Dnv~D-------~~~p~g~~Dmle~-~~l~~~-~~~~~~~~~~l~maT~~gAraLgl~ 328 (329)
T PRK06886 280 DNICD-------YMVPLCEGDMWQE-LSLLAA-GCRFYDLDEMVNIASINGRKVLGLE 328 (329)
T ss_pred CCCcc-------cCCCCCCCCHHHH-HHHHHH-HcCCCCHHHHHHHHhhhHHHHhCCC
Confidence 97421 2333344332 11 111111 1233479999999999999999984
No 105
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=96.57 E-value=0.11 Score=51.18 Aligned_cols=151 Identities=15% Similarity=0.115 Sum_probs=89.6
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHH-----HHHHHHHHh--cCCCeEEEEecC--CHHHHHHHHcc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID-----TILQPLIQR--LPQLKVVMEHIT--TMDAVKFVESC 170 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~-----~~~~~~la~--~~~~~lhi~HvS--t~~sl~~i~~a 170 (329)
+.+.++++.+++ |.++.+|+.+.. .|...+. +-+. .+++ ..+.++.+.|.. +.+.++++++
T Consensus 207 e~l~~~~~~a~~-g~~i~~H~~e~~-------~e~~~~~~~~g~~~i~-~l~~~g~l~~~~~~~H~~~l~~~~~~~la~- 276 (418)
T cd01313 207 EQLAALAALASE-KAPVHIHLAEQP-------KEVDDCLAAHGRRPVE-LLLDHGHLDARWCLVHATHLTDNETLLLGR- 276 (418)
T ss_pred HHHHHHHHHHhc-CCceEEEeCCCH-------HHHHHHHHHcCCCHHH-HHHHcCCCCCCEEEEeCCCCCHHHHHHHHH-
Confidence 789999999999 999999984321 1111111 0110 1222 346677777776 5677888776
Q ss_pred cCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCcc
Q 020186 171 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 250 (329)
Q Consensus 171 k~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~ 250 (329)
..+++-.||..-+. + +.+ .||+| +.+..|.- ..+|||- +. +..
T Consensus 277 --~g~~v~~~P~sn~~----l---g~g-----~~p~~---------~l~~~Gv~-v~lGtD~-~~------------~~d 319 (418)
T cd01313 277 --SGAVVGLCPTTEAN----L---GDG-----IFPAA---------ALLAAGGR-IGIGSDS-NA------------RID 319 (418)
T ss_pred --cCCEEEECCCchhh----c---cCC-----CCCHH---------HHHHCCCc-EEEecCC-CC------------CcC
Confidence 46778889964211 1 111 25544 33455755 4899993 21 111
Q ss_pred chhHHHHH-HH-HHHH---------hcCCHHHHHHHHhhhhhhhcCCCCC------cccEEEEe
Q 020186 251 NAPVALSL-YA-KVFE---------EMGALDKLEAFTSFNGPDFYGLPRN------TSKIKLTK 297 (329)
Q Consensus 251 ~~e~~lpl-l~-~~~~---------~~~~l~~~v~~~s~nPAkifgl~~~------dADlvi~~ 297 (329)
-++.+..+ +. .... ..++..+++++.+.|+||.+|++.| .|||+++|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~~Gsle~Gk~ADlvvld 383 (418)
T cd01313 320 LLEELRQLEYSQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLATGALEAGARADLLSLD 383 (418)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCCCCeECCCCccCEEEEc
Confidence 11111111 11 1111 1578999999999999999998532 79999994
No 106
>PRK07213 chlorohydrolase; Provisional
Probab=96.57 E-value=0.13 Score=49.82 Aligned_cols=152 Identities=16% Similarity=0.175 Sum_probs=86.9
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHH---HHHHHHHHHHHHhcCCCe-EEEEecC--CHHHHHHHHcccCC
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREK---VFIDTILQPLIQRLPQLK-VVMEHIT--TMDAVKFVESCKEG 173 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~---~av~~~~~~~la~~~~~~-lhi~HvS--t~~sl~~i~~ak~~ 173 (329)
+.+.++++.+++.|.++.+|+...... .....|. ..+. .+...|.. -.+.|.. +.+.++++++ .
T Consensus 179 ~~l~~~~~~A~~~g~~v~~H~~e~~~e-~~~~~~~~G~~~v~------~~~~~G~~~~~i~H~~~~~~~~i~~la~---~ 248 (375)
T PRK07213 179 EELKFICKECKREKKIFSIHAAEHKGS-VEYSLEKYGMTEIE------RLINLGFKPDFIVHATHPSNDDLELLKE---N 248 (375)
T ss_pred HHHHHHHHHHHHcCCEEEEeeCCchhH-HHHHHHHcCCChHH------HHHhcCCCCCEEEECCCCCHHHHHHHHH---c
Confidence 789999999999999999999543210 0000000 0122 22223433 0255554 4566777765 4
Q ss_pred ceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchh
Q 020186 174 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAP 253 (329)
Q Consensus 174 ~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e 253 (329)
.+++..||..= .+. +.+ .|| +.+.++.|.- +.++||..+.. -..
T Consensus 249 g~~v~~~P~sn-----~~l--~~g-----~~~---------v~~l~~~Gv~-v~lGTD~~~~~------------~~~-- 292 (375)
T PRK07213 249 NIPVVVCPRAN-----ASF--NVG-----LPP---------LNEMLEKGIL-LGIGTDNFMAN------------SPS-- 292 (375)
T ss_pred CCcEEECCcch-----hhh--ccC-----Ccc---------HHHHHHCCCE-EEEeeCCCCCc------------hHh--
Confidence 66778899521 111 111 244 3345556754 48999975321 001
Q ss_pred HHHHHHHHHH-HhcCCHHHHHHHHhhhhhhhcCCCC-C------cccEEEEec
Q 020186 254 VALSLYAKVF-EEMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTKI 298 (329)
Q Consensus 254 ~~lpll~~~~-~~~~~l~~~v~~~s~nPAkifgl~~-~------dADlvi~~~ 298 (329)
++--+.... ...++..++.++.+.|+|+.+|++. | .|||+++|.
T Consensus 293 -~~~e~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~~~G~l~~G~~ADlvv~d~ 344 (375)
T PRK07213 293 -IFREMEFIYKLYHIEPKEILKMATINGAKILGLINVGLIEEGFKADFTFIKP 344 (375)
T ss_pred -HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhCCCCcCCcCCCCcccEEEEcC
Confidence 111111111 1257899999999999999999842 3 699999953
No 107
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=96.43 E-value=0.69 Score=45.87 Aligned_cols=160 Identities=9% Similarity=0.041 Sum_probs=88.4
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHH---------HHHHHHHHHHHhcCCCeEEEEecC--CHHHHHHHH
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKV---------FIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVE 168 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~---------av~~~~~~~la~~~~~~lhi~HvS--t~~sl~~i~ 168 (329)
+.+.++.+.+++.|.++.+|.-... .|.. .+.+. .-....+-++.+.|.. +.+.++++.
T Consensus 204 ~~l~~~~~lA~~~~~~i~~H~~E~~-------~e~~~~~~~~g~~~~~~l---~~~G~l~~~~~~~H~~~~~~~d~~~la 273 (441)
T TIGR03314 204 AGLEMCREAVQATGRGFHIHVAEDI-------YDVEDSHHKYGKDIVERL---ADFGLLGSKTLAAHCIYLSDREIELLN 273 (441)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCH-------HHHHHHHHHcCCCHHHHH---HHCCCCCCCeEEEEEecCCHHHHHHHH
Confidence 7888999999999999999986542 1111 11111 1112345576666655 567788887
Q ss_pred cccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCC
Q 020186 169 SCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG 248 (329)
Q Consensus 169 ~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~G 248 (329)
+. .+++=.||-- +..- +.| -||++ +.+..|.- ..||||-.+..
T Consensus 274 ~~---g~~v~~cP~s------n~~l-~~G-----~~p~~---------~~~~~Gv~-v~LGtD~~~~d------------ 316 (441)
T TIGR03314 274 ET---DTFVVHNPES------NMGN-AVG-----YNPVL---------RMFKNGIL-LGLGTDGYTSD------------ 316 (441)
T ss_pred Hc---CCcEEECHHH------Hhhh-ccC-----CCCHH---------HHHHCCCE-EEEcCCCCCcC------------
Confidence 64 4566678831 1110 111 25543 33445643 48999953210
Q ss_pred ccchhHHHHHHHHHHHh---cCCHHHHHHHHhhhhhhhcC----CCC------CcccEEEEe--cceeecCCcc
Q 020186 249 IYNAPVALSLYAKVFEE---MGALDKLEAFTSFNGPDFYG----LPR------NTSKIKLTK--IPWKVPEAFS 307 (329)
Q Consensus 249 i~~~e~~lpll~~~~~~---~~~l~~~v~~~s~nPAkifg----l~~------~dADlvi~~--~~~~v~~~~~ 307 (329)
+ --|..+.+++..... ...+.++.++.+.|.|+.+| .+. +.|||+++| ..|.++..+.
T Consensus 317 ~-~~em~~a~~~~~~~~~~~~~~~~~~~~~aT~~ga~al~~~l~~~~G~Le~G~~ADlvv~d~~~~~~~~~~~~ 389 (441)
T TIGR03314 317 M-FESLKFANFKHKDAGGDLNAAWPESPAMLFENNNEIAERNFGAKFGRLEPGAKADLIIVDYNAPTPLTADNI 389 (441)
T ss_pred H-HHHHHHHHHHhccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccEEEEcCCCCeeechhhc
Confidence 0 002222222221111 11356788888999999764 221 279999994 5666654443
No 108
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=96.37 E-value=0.79 Score=42.03 Aligned_cols=97 Identities=19% Similarity=0.186 Sum_probs=65.0
Q ss_pred CHHHHHHHHhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHH
Q 020186 64 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP 143 (329)
Q Consensus 64 ~~~el~~l~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~ 143 (329)
..++++.+.+.| +.|+|+.... .+. .|. ..+.+.++++++.|.++.+|+....+ ..+..
T Consensus 82 ~~~~l~~~~~~g-~rGvRl~~~~----~~~--~~~-~~~~~~~~~~~~~gl~v~~~~~~~~l---------~~l~~---- 140 (263)
T cd01311 82 TDAELKEMHDAG-VRGVRFNFLF----GGV--DNK-DELDEIAKRAAELGWHVQVYFDAVDL---------PALLP---- 140 (263)
T ss_pred CHHHHHHHHHCC-CeEEEEeccc----CCC--CCH-HHHHHHHHHHHHcCCEEEEEeCHhhH---------HHHHH----
Confidence 457888888888 5799986531 111 244 77899999999999999999875421 12222
Q ss_pred HHHhcCCCeEEEEecCCHH--------H-HHHHHcccCCceEEEecch
Q 020186 144 LIQRLPQLKVVMEHITTMD--------A-VKFVESCKEGFVAATVTPQ 182 (329)
Q Consensus 144 ~la~~~~~~lhi~HvSt~~--------s-l~~i~~ak~~~vt~Et~ph 182 (329)
.+.+. +.++.+.|+..+. . -+.++.++..+|++.++--
T Consensus 141 l~~~~-~l~ivldH~G~p~~~~~~~~~~~~~~l~~l~~pNV~~k~Sg~ 187 (263)
T cd01311 141 FLQKL-PVAVVIDHFGRPDVTKGVDGAEFAALLKLIEEGNVWVKVSGP 187 (263)
T ss_pred HHHHC-CCCEEEECCCCCCCCCCCCCHhHHHHHHHHhcCCEEEEecch
Confidence 23455 9999999998532 2 2334433226899998764
No 109
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=96.33 E-value=0.27 Score=48.53 Aligned_cols=154 Identities=12% Similarity=0.130 Sum_probs=86.5
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHH-----HHHHHHH--hcCCCeEEEEecC--CHHHHHHHHcc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC 170 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~-----~~~~~la--~~~~~~lhi~HvS--t~~sl~~i~~a 170 (329)
+.|.++++.+++.|.++.+|+..... |..++.. .+. .+. ...+.++.+.|.. +.+.++++++
T Consensus 190 e~l~~~~~~A~~~g~~v~~H~~e~~~-------~~~~~~~~~G~~~i~-~l~~~g~l~~r~~~~H~~~l~~~~~~~la~- 260 (430)
T PRK06038 190 EFLSKVKKLANKDGVGIHIHVLETEA-------ELNQMKEQYGMCSVN-YLDDIGFLGPDVLAAHCVWLSDGDIEILRE- 260 (430)
T ss_pred HHHHHHHHHHHHcCCcEEEEcCCCHH-------HHHHHHHHhCCCHHH-HHHHcCCCCCCeEEEEEecCCHHHHHHHHh-
Confidence 78999999999999999999875421 1111111 010 111 2235554444443 3455777765
Q ss_pred cCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCcc
Q 020186 171 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 250 (329)
Q Consensus 171 k~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~ 250 (329)
..+..-.||..-.. . +.+ .+|+| +.+..|.- ..+|||..+.. +..
T Consensus 261 --~g~~v~~~P~~n~~----~---~~~-----~~p~~---------~~~~~Gv~-v~lGtD~~~~~-----------~~~ 305 (430)
T PRK06038 261 --RGVNVSHNPVSNMK----L---ASG-----IAPVP---------KLLERGVN-VSLGTDGCASN-----------NNL 305 (430)
T ss_pred --cCCEEEEChHHhhh----h---ccC-----CCCHH---------HHHHCCCe-EEEeCCCCccC-----------CCc
Confidence 35666788863211 1 001 13332 34455654 49999953210 111
Q ss_pred c-h-hHHHHHHHHHHH----hcCCHHHHHHHHhhhhhhhcCCCCC------cccEEEEe
Q 020186 251 N-A-PVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLPRN------TSKIKLTK 297 (329)
Q Consensus 251 ~-~-e~~lpll~~~~~----~~~~l~~~v~~~s~nPAkifgl~~~------dADlvi~~ 297 (329)
. + +..+..+..... ..++++++++..+.|||+.+|++.| .|||+++|
T Consensus 306 d~~~~~~~a~~~~~~~~~~~~~~~~~~al~~aT~~gA~~lg~~~G~l~~G~~ADlvvld 364 (430)
T PRK06038 306 DMFEEMKTAALLHKVNTMDPTALPARQVLEMATVNGAKALGINTGMLKEGYLADIIIVD 364 (430)
T ss_pred CHHHHHHHHHHHhhhccCCCCcCCHHHHHHHHhHHHHHHhCCCCCccCCCcccCEEEEe
Confidence 1 1 111211221111 2468999999999999999998533 79999994
No 110
>PRK09875 putative hydrolase; Provisional
Probab=96.27 E-value=0.088 Score=49.38 Aligned_cols=148 Identities=14% Similarity=0.159 Sum_probs=79.9
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCC---eEEEEecCCHHHHHHHHcccCCceE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQL---KVVMEHITTMDAVKFVESCKEGFVA 176 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~---~lhi~HvSt~~sl~~i~~ak~~~vt 176 (329)
..++.+.+..+++|.|+++|.+.... ... .+ .+.+..|+ ++.|.|+.....++.+++.-+.-++
T Consensus 139 kvl~Aaa~a~~~TG~pi~~Ht~~~~~----------g~e-~l--~il~e~Gvd~~rvvi~H~d~~~d~~~~~~l~~~G~~ 205 (292)
T PRK09875 139 KVFIAAALAHNQTGRPISTHTSFSTM----------GLE-QL--ALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAY 205 (292)
T ss_pred HHHHHHHHHHHHHCCcEEEcCCCccc----------hHH-HH--HHHHHcCcCcceEEEeCCCCCCCHHHHHHHHHcCCE
Confidence 45666667778889999999775421 121 12 34455576 7999999644444444332113445
Q ss_pred EEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHH-HHcCCCC-eEEecCCCCCCcCcccccCCcCCccchhH
Q 020186 177 ATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSA-VTSGSRK-FFLGTDSAPHERGRKECACGCAGIYNAPV 254 (329)
Q Consensus 177 ~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~a-l~~G~Id-~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~ 254 (329)
.|-+ .+ +.+.+ .| .++|..++.. +..|..| +++++|=...+ ...++| | .|...
T Consensus 206 l~fD----~~--------g~~~~---~p----d~~r~~~i~~L~~~Gy~drilLS~D~~~~~---~~~~~g--g-~G~~~ 260 (292)
T PRK09875 206 VQFD----TI--------GKNSY---YP----DEKRIAMLHALRDRGLLNRVMLSMDITRRS---HLKANG--G-YGYDY 260 (292)
T ss_pred EEec----cC--------CCccc---CC----HHHHHHHHHHHHhcCCCCeEEEeCCCCCcc---cccccC--C-CChhH
Confidence 5533 11 11111 12 3345444444 4566333 36777753221 111233 2 34333
Q ss_pred HHHHHHHHHH-hcCCHHHHHHHHhhhhhhhcC
Q 020186 255 ALSLYAKVFE-EMGALDKLEAFTSFNGPDFYG 285 (329)
Q Consensus 255 ~lpll~~~~~-~~~~l~~~v~~~s~nPAkifg 285 (329)
.+.-+.-.+. +.++-+++-+++..||+|+|+
T Consensus 261 i~~~~ip~L~~~Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 261 LLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHCHHHHhC
Confidence 4443333333 467999999999999999985
No 111
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=96.19 E-value=0.29 Score=48.34 Aligned_cols=154 Identities=13% Similarity=0.088 Sum_probs=89.1
Q ss_pred HHHHHHHHHhhHcC-CcEEEecCCCCCCCChhHHHHHHHHH-------HHHHHHH--hcCCCeEEEEecC--CHHHHHHH
Q 020186 100 GKCVHVLEEMVEQN-MPLLVHGEVTDPIVDIFDREKVFIDT-------ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFV 167 (329)
Q Consensus 100 ~~l~~~l~~~~~~~-~~v~vHaEd~~~~~~~~~~E~~av~~-------~~~~~la--~~~~~~lhi~HvS--t~~sl~~i 167 (329)
+.+.++++.+++.| .++.+|+.... .|.+.+.+ .+. .+. ...|.++.+.|.. +.+.++++
T Consensus 208 e~l~~~~~~A~~~g~~~v~~H~~e~~-------~e~~~~~~~~g~~~~p~~-~l~~~G~l~~~~~l~H~~~l~~~~~~~l 279 (429)
T cd01303 208 ELLAALGKLAKEHPDLHIQTHISENL-------DEIAWVKELFPGARDYLD-VYDKYGLLTEKTVLAHCVHLSEEEFNLL 279 (429)
T ss_pred HHHHHHHHHHHHCCCCeEEEeeCCCH-------HHHHHHHHHcCCCCCHHH-HHHHCCCCCCCcEEEeCCCCCHHHHHHH
Confidence 78999999999999 99999985331 12222211 110 111 2235677777776 56677777
Q ss_pred HcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcC
Q 020186 168 ESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCA 247 (329)
Q Consensus 168 ~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~ 247 (329)
++ ..+.+-.||..-. .+ +. -.+| +.+.+..|.-= .++||..+-.
T Consensus 280 ~~---~g~~v~~~P~sn~----~l-----~~---g~~~---------~~~~~~~Gv~v-~lGtD~~~~~----------- 323 (429)
T cd01303 280 KE---RGASVAHCPTSNL----FL-----GS---GLFD---------VRKLLDAGIKV-GLGTDVGGGT----------- 323 (429)
T ss_pred HH---cCCEEEECccchh----hh-----cc---CCCC---------HHHHHHCCCeE-EEeccCCCCC-----------
Confidence 65 4567777885311 01 10 1233 33455567653 8999964210
Q ss_pred Cccch-hHHHHHHHHHHH-------hcCCHHHHHHHHhhhhhhhcCCCC--C------cccEEEEe
Q 020186 248 GIYNA-PVALSLYAKVFE-------EMGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTK 297 (329)
Q Consensus 248 Gi~~~-e~~lpll~~~~~-------~~~~l~~~v~~~s~nPAkifgl~~--~------dADlvi~~ 297 (329)
...-+ +..+-+...... ..++.++++++.+.||||.+|++. | .|||+|+|
T Consensus 324 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~gA~~lg~~~~~Gsle~Gk~ADlvvld 389 (429)
T cd01303 324 SFSMLDTLRQAYKVSRLLGYELGGHAKLSPAEAFYLATLGGAEALGLDDKIGNFEVGKEFDAVVID 389 (429)
T ss_pred CccHHHHHHHHHHHHHhhccccCCcCCCCHHHHHHHHhhHHHHHcCCCCCCcCcCCCCccCEEEEc
Confidence 11101 111111111111 135889999999999999999842 3 69999994
No 112
>PRK06846 putative deaminase; Validated
Probab=95.96 E-value=1 Score=44.09 Aligned_cols=23 Identities=13% Similarity=0.010 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhHcCCcEEEecCC
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEV 122 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd 122 (329)
+.+.++++.++++|.++.+|.-.
T Consensus 206 ~~l~~~~~lA~~~g~~v~~Hv~e 228 (410)
T PRK06846 206 KSLDTMFQIAVDFNKGVDIHLHD 228 (410)
T ss_pred HHHHHHHHHHHHhCCCcEEEECC
Confidence 67889999999999999999663
No 113
>PRK10812 putative DNAse; Provisional
Probab=95.94 E-value=0.69 Score=42.74 Aligned_cols=68 Identities=18% Similarity=0.145 Sum_probs=40.5
Q ss_pred HHHHHHHcCCCC-eEEecCCCCCCcCcccccCCcCCccchhHHHHHHHHHHH--hcCCHHHHHHHHhhhhhhhcCCC
Q 020186 214 AVVSAVTSGSRK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYGLP 287 (329)
Q Consensus 214 aLw~al~~G~Id-~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~~--~~~~l~~~v~~~s~nPAkifgl~ 287 (329)
.+.+.++.+-+| +++.||- |+.... ..-|-.+-...++..+..+. +.++.+++.+.+..|+.++||++
T Consensus 187 ~~~~~~~~ipldrlLlETD~-P~~~p~-----~~~g~~n~P~~i~~v~~~ia~l~g~~~eei~~~~~~N~~~lf~~~ 257 (265)
T PRK10812 187 QLRDAARYVPLDRLLVETDS-PYLAPV-----PHRGKENQPAMVRDVAEYMAVLKGVSVEELAQVTTDNFARLFHID 257 (265)
T ss_pred HHHHHHHhCChhhEEEecCC-CCCCCc-----CCCCCCCCcHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHCCC
Confidence 344445444332 2667884 764321 11132222335555444332 46899999999999999999994
No 114
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=95.59 E-value=0.052 Score=52.58 Aligned_cols=157 Identities=11% Similarity=0.030 Sum_probs=88.7
Q ss_pred cchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC---CH-HHHHHHHhcCceeEEEE
Q 020186 7 LPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT---SP-DEIKLARKTGVVFAVKL 82 (329)
Q Consensus 7 ~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~---~~-~el~~l~~~G~v~~~K~ 82 (329)
+..+++||+||++||+++.+...+.+.+....+.+.+... ..|..++........ .+ .++..+.+. .+.+.
T Consensus 81 ~~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv--~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~g~ 155 (387)
T cd01308 81 LSDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGI--TCFVYTGSYEVPTRTITGSIRKDLLLIDKV---IGVGE 155 (387)
T ss_pred HHHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCC--EEEEEecccCCCCcCchhhHHHHHHHHHHh---cCcce
Confidence 4577899999999999766665666666555555444333 344332211001011 11 123332221 11111
Q ss_pred eeccccccCCCCccChHHHHHHHHHHhhHcCC------cEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeE-EE
Q 020186 83 YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNM------PLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKV-VM 155 (329)
Q Consensus 83 f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~------~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~l-hi 155 (329)
..- +.....-++. ..+.+++++++..+. .+.+|.... ..++.+++ .+.+..|+++ |+
T Consensus 156 ~~~---~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~----------~~~~~~i~--~~~~~~G~~~~~~ 219 (387)
T cd01308 156 IAI---SDHRSSQPTV-EELARIAAEARVGGLLGGKAGIVHIHLGDG----------KRALSPIF--ELIEETEIPITQF 219 (387)
T ss_pred EEE---cCCCCCCCCH-HHHHHHHHHHHHHHHhcCCCcEEEEEeCCc----------hHHHHHHH--HHHHhcCCCccee
Confidence 110 0011112333 678888888876443 366666643 23566666 6777889988 99
Q ss_pred EecCCHHHHH----HHHcccC---CceEEEecchhh
Q 020186 156 EHITTMDAVK----FVESCKE---GFVAATVTPQHL 184 (329)
Q Consensus 156 ~HvSt~~sl~----~i~~ak~---~~vt~Et~phhL 184 (329)
+|.++..+.+ .++.+|+ ..+.++++|||+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~G~~v~i~~~~~~~~~ 255 (387)
T cd01308 220 LPTHINRTAPLFEQGVEFAKMGGTIDLTSSIDPQFR 255 (387)
T ss_pred ECCcccCCHHHHHHHHHHHHcCCcEEEECCCCcccc
Confidence 9999887777 4555554 567888888877
No 115
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=95.58 E-value=0.85 Score=44.35 Aligned_cols=152 Identities=17% Similarity=0.179 Sum_probs=87.6
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHH---------------------------HHHHHHHHHHHhcCCCe
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKV---------------------------FIDTILQPLIQRLPQLK 152 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~---------------------------av~~~~~~~la~~~~~~ 152 (329)
+.+.++.+.+++.|.++.+|..... .|.. .+.+ + .-....+-+
T Consensus 163 e~l~~~~~lA~~~g~~i~~Hl~E~~-------~e~~~~~~~~g~~~~~~~~~~~~~~~~~g~~pv~~-l--~~~g~L~~~ 232 (381)
T cd01312 163 ELAQDLIDLAKKLNLPLSTHFLESK-------EEREWLEESKGWFKHFWESFLKLPKPKKLATAIDF-L--DMLGGLGTR 232 (381)
T ss_pred HHHHHHHHHHHHcCCeEEEEecCcH-------HHHHHHHHhccchhhHhhhhcccccccCCCCHHHH-H--HHcCCCCCC
Confidence 7888999999999999999976431 1111 1111 1 111234567
Q ss_pred EEEEecC--CHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEec
Q 020186 153 VVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGT 230 (329)
Q Consensus 153 lhi~HvS--t~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~S 230 (329)
+.+.|.. +.+.++++++ ..+.+-.||.. +.. .+.. .+| +-+.+..|.- ..++|
T Consensus 233 ~~~~H~~~l~~~~~~~l~~---~g~~v~~~P~s-----n~~----lg~g---~~p---------~~~~~~~Gv~-v~lGt 287 (381)
T cd01312 233 VSFVHCVYANLEEAEILAS---RGASIALCPRS-----NRL----LNGG---KLD---------VSELKKAGIP-VSLGT 287 (381)
T ss_pred cEEEECCcCCHHHHHHHHH---cCCeEEECcch-----hhh----hcCC---CcC---------HHHHHHCCCc-EEEeC
Confidence 7777766 4667777765 35677888842 111 1111 133 3344556765 48999
Q ss_pred CCCCCCcCcccccCCcCCccchhHHHHHHHHHHHh---cCCHHHHHHHHhhhhhhhcCCCCC------cccEEEEe
Q 020186 231 DSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE---MGALDKLEAFTSFNGPDFYGLPRN------TSKIKLTK 297 (329)
Q Consensus 231 DHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~~~---~~~l~~~v~~~s~nPAkifgl~~~------dADlvi~~ 297 (329)
|..+.. +...-++.+ -+++..... ..+..+++++.+.|+|+.+|++.| .|||+++|
T Consensus 288 D~~~~~----------~~~d~~~~~-~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~~~Gsle~Gk~ADlvv~d 352 (381)
T cd01312 288 DGLSSN----------ISLSLLDEL-RALLDLHPEEDLLELASELLLMATLGGARALGLNNGEIEAGKRADFAVFE 352 (381)
T ss_pred CCCccC----------CCCCHHHHH-HHHHHhcccccccCCHHHHHHHHHHHHHHHhCCCCCccCCCCcccEEEEe
Confidence 953210 111111111 111111111 246789999999999999997422 79999995
No 116
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=95.47 E-value=1.5 Score=39.94 Aligned_cols=136 Identities=19% Similarity=0.242 Sum_probs=74.5
Q ss_pred HHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHcccCCceEEEecc
Q 020186 102 CVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTP 181 (329)
Q Consensus 102 l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~sl~~i~~ak~~~vt~Et~p 181 (329)
+.++++.+++.|.++.+|+.......+ ...+...+ .+ ....-.|.+|+ +.+.++++++ ..+.+..||
T Consensus 127 l~~~~~~A~~~g~~v~~H~~e~~~~~g-----~~~i~~~~--~~--~~~~i~H~~~l-~~~~~~~la~---~g~~v~~~P 193 (263)
T cd01305 127 LEDILELLRRRGKLFAIHASETRESVG-----MTDIERAL--DL--EPDLLVHGTHL-TDEDLELVRE---NGVPVVLCP 193 (263)
T ss_pred HHHHHHHHHHCCCeeEEecCCCCCCCC-----chhHHHHH--hC--CCCEEEEcCCC-CHHHHHHHHH---cCCcEEECh
Confidence 889999999999999999874421000 11233332 22 11222455554 4566777776 467788899
Q ss_pred hhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccch-hHHHHHHH
Q 020186 182 QHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA-PVALSLYA 260 (329)
Q Consensus 182 hhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~-e~~lpll~ 260 (329)
.. +... +.| .||+ .+.+..|.- ..+|||..+.. ...-+ |..+-+..
T Consensus 194 ~s-----n~~l--~~g-----~~p~---------~~l~~~Gv~-v~lGtD~~~~~-----------~~~~~~~~~~~~~~ 240 (263)
T cd01305 194 RS-----NLYF--GVG-----IPPV---------AELLKLGIK-VLLGTDNVMVN-----------EPDMWAEMEFLAKY 240 (263)
T ss_pred hh-----HHHh--CCC-----CCCH---------HHHHHCCCc-EEEECCCCccC-----------CCCHHHHHHHHHHH
Confidence 42 1110 111 1443 345556754 48999975421 11111 11111111
Q ss_pred HHHHhcCCHHHHHHHHhhhhhhh
Q 020186 261 KVFEEMGALDKLEAFTSFNGPDF 283 (329)
Q Consensus 261 ~~~~~~~~l~~~v~~~s~nPAki 283 (329)
......++..++.+..+.|+||+
T Consensus 241 ~~~~~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 241 SRLQGYLSPLEILRMATVNAAEF 263 (263)
T ss_pred hcccccCCHHHHHHHHhhccccC
Confidence 11112458999999999999985
No 117
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=95.24 E-value=2.8 Score=39.55 Aligned_cols=139 Identities=15% Similarity=0.063 Sum_probs=75.3
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecC-CHHHHHHHHcccCCceEEE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESCKEGFVAAT 178 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvS-t~~sl~~i~~ak~~~vt~E 178 (329)
+.+..+++.+++.|.++.+|+....- .. .+...+ ... ....=.|-.|++ .++.++++++ ..+.++
T Consensus 173 ~~~~~~~~~A~~~g~~v~~H~~E~~~-----~~---~~~~a~--~~~-g~~~i~H~~~l~~~~~~~~~l~~---~gi~v~ 238 (325)
T cd01320 173 EKFVRAFQRAREAGLRLTAHAGEAGG-----PE---SVRDAL--DLL-GAERIGHGIRAIEDPELVKRLAE---RNIPLE 238 (325)
T ss_pred HHHHHHHHHHHHCCCceEEeCCCCCC-----HH---HHHHHH--HHc-CCcccchhhccCccHHHHHHHHH---cCCeEE
Confidence 67889999999999999999853311 01 122222 101 112224555665 3557777765 578999
Q ss_pred ecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHH
Q 020186 179 VTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSL 258 (329)
Q Consensus 179 t~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpl 258 (329)
+||. .+... +.+.. .-.|| +.+.+..|.- .+++||..+.. + .. ++--
T Consensus 239 ~~P~-----sn~~l--~~~~~-~~~~p---------~~~l~~~Gv~-v~lgTD~~~~~-----------~-~~---~~~e 285 (325)
T cd01320 239 VCPT-----SNVQT--GAVKS-LAEHP---------LRELLDAGVK-VTINTDDPTVF-----------G-TY---LTDE 285 (325)
T ss_pred ECCC-----ccccc--cccCC-cccCh---------HHHHHHCCCE-EEECCCCCccc-----------C-CC---HHHH
Confidence 9993 11111 11111 11233 3345566765 48999964221 1 11 1111
Q ss_pred HHHHHHh-cCCHHHHHHHHhhhhhhhcCC
Q 020186 259 YAKVFEE-MGALDKLEAFTSFNGPDFYGL 286 (329)
Q Consensus 259 l~~~~~~-~~~l~~~v~~~s~nPAkifgl 286 (329)
+...... .++.+++.+ ++.|+++.--+
T Consensus 286 ~~~~~~~~~l~~~el~~-~~~na~~~~f~ 313 (325)
T cd01320 286 YELLAEAFGLTEEELKK-LARNAVEASFL 313 (325)
T ss_pred HHHHHHHcCCCHHHHHH-HHHHHHHHhCC
Confidence 2112222 678888776 66898886433
No 118
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=94.86 E-value=0.25 Score=45.14 Aligned_cols=137 Identities=18% Similarity=0.131 Sum_probs=74.4
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCe--EEEEecCC--HHHHHHHHcccCCce
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK--VVMEHITT--MDAVKFVESCKEGFV 175 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~--lhi~HvSt--~~sl~~i~~ak~~~v 175 (329)
..+.+.++.+++++.|+++|+.+. ...++ .+.+..+.+ --|.|--+ .+.++.+.+ .
T Consensus 111 ~vF~~ql~lA~~~~~pv~iH~r~a-------------~~~~l--~il~~~~~~~~~~i~H~f~g~~~~~~~~~~---~-- 170 (255)
T PF01026_consen 111 EVFERQLELAKELNLPVSIHCRKA-------------HEELL--EILKEYGPPNLRVIFHCFSGSPEEAKKFLD---L-- 170 (255)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEESH-------------HHHHH--HHHHHTTGGTSEEEETT--S-HHHHHHHHH---T--
T ss_pred HHHHHHHHHHHHhCCcEEEecCCc-------------HHHHH--HHHHhccccceeEEEecCCCCHHHHHHHHh---c--
Confidence 567788899999999999999863 11222 222222221 35778733 323332221 1
Q ss_pred EEEecchhhhcchhhhcCCCCCCceEEcCCCCC--hhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchh
Q 020186 176 AATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR--EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAP 253 (329)
Q Consensus 176 t~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~--~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e 253 (329)
|-++-++|.+-. .++...+.+.+-...| ++-||- |+....+. .|-...+
T Consensus 171 ---------------------g~~~S~~~~~~~~~~~~~~~~~~~ip~dri--llETD~-P~~~~~~~-----~~~~~~p 221 (255)
T PF01026_consen 171 ---------------------GCYFSFSGAITFKNSKKVRELIKAIPLDRI--LLETDA-PYLAPDPY-----RGKPNEP 221 (255)
T ss_dssp ---------------------TEEEEEEGGGGSTTSHHHHHHHHHS-GGGE--EEE-BT-TSSECTTS-----TTSE--G
T ss_pred ---------------------CceEEecccccccccHHHHHHHhcCChhhE--EEcCCC-CcCCcccc-----CCCCCCh
Confidence 223334433222 2334455566655565 788994 65432111 1322223
Q ss_pred HHHHHHHHHH-H-hcCCHHHHHHHHhhhhhhhcC
Q 020186 254 VALSLYAKVF-E-EMGALDKLEAFTSFNGPDFYG 285 (329)
Q Consensus 254 ~~lpll~~~~-~-~~~~l~~~v~~~s~nPAkifg 285 (329)
..++-.+..+ . +.++++++.+.+..|..++||
T Consensus 222 ~~i~~~~~~la~~~~~~~e~~~~~~~~N~~r~f~ 255 (255)
T PF01026_consen 222 SNIPKVAQALAEIKGISLEELAQIIYENAKRLFG 255 (255)
T ss_dssp GGHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 3455444333 2 478999999999999999997
No 119
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=94.62 E-value=2.1 Score=42.65 Aligned_cols=151 Identities=17% Similarity=0.144 Sum_probs=85.9
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHH-----HHHHHHHh--cCCCeEEEEecC--CHHHHHHHHcc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQR--LPQLKVVMEHIT--TMDAVKFVESC 170 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~-----~~~~~la~--~~~~~lhi~HvS--t~~sl~~i~~a 170 (329)
+.+.++++ +++.|.++.+|+.+.. .|...+.+ -+. .+.+ ..+.++.+.|.. +.+.++++++
T Consensus 216 e~l~~~~~-a~~~g~~v~~H~~e~~-------~e~~~~~~~~G~~~v~-~l~~~g~l~~~~~~~H~~~l~~~d~~~la~- 285 (455)
T TIGR02022 216 EQLAAVLQ-ASDRQAPVHIHVAEQQ-------KEVDDCLAWSGRRPVE-WLLDHGPVDARWCLVHATHLTDEETALLAR- 285 (455)
T ss_pred HHHHHHHH-HHhCCCceEEEECCCh-------HHHHHHHHHhCCCHHH-HHHHcCCCCCCEEEEEeecCCHHHHHHHHH-
Confidence 67888888 7899999999995331 11111110 010 1222 345566666655 5677888876
Q ss_pred cCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCcc
Q 020186 171 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 250 (329)
Q Consensus 171 k~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~ 250 (329)
..+++-.||..- .. .+.. -||++ +.+..|.- ..+|||..+ +..
T Consensus 286 --~g~~v~~~P~sn-----~~----lg~g---~~pi~---------~l~~~Gv~-v~lGTD~~~-------------~~d 328 (455)
T TIGR02022 286 --SGAVAGLCPTTE-----AN----LGDG---IFPAV---------DFVAAGGR-FGIGSDSHV-------------VID 328 (455)
T ss_pred --cCCeEEEChhhh-----cc----ccCC---CCCHH---------HHHHCCCe-EEEECCCCC-------------CCC
Confidence 467888899631 11 1111 24543 34555755 489999422 111
Q ss_pred ch-hHHHHHHHHHHH-----------hcCCHHHHHHHHhhhhhhhcCCCCC------cccEEEEe
Q 020186 251 NA-PVALSLYAKVFE-----------EMGALDKLEAFTSFNGPDFYGLPRN------TSKIKLTK 297 (329)
Q Consensus 251 ~~-e~~lpll~~~~~-----------~~~~l~~~v~~~s~nPAkifgl~~~------dADlvi~~ 297 (329)
-+ |..+-.+...+. ...+.++++++.+.|+||.+|++.| .|||+|+|
T Consensus 329 ~~~~m~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~~~GsLe~Gk~ADlvvld 393 (455)
T TIGR02022 329 VAEELRQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGLATGGLRAGARADFLTLD 393 (455)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCcCEEEEe
Confidence 11 112211111111 1235678899999999999997422 79999995
No 120
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=94.61 E-value=2.1 Score=42.64 Aligned_cols=152 Identities=15% Similarity=0.090 Sum_probs=86.0
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHH-----HHHHHHHh--cCCCeEEEEecC--CHHHHHHHHcc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQR--LPQLKVVMEHIT--TMDAVKFVESC 170 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~-----~~~~~la~--~~~~~lhi~HvS--t~~sl~~i~~a 170 (329)
+.+.++++.+ +.|.++.+|+-+.. .|...+.+ .+. .+++ ..+.++.+.|.. +.+.++++++
T Consensus 216 e~l~~~~~~A-~~g~~i~~H~~e~~-------~e~~~~~~~~g~~~~~-~l~~~g~l~~~~~l~H~~~l~~~d~~~la~- 285 (456)
T PRK09229 216 DQLAAVLALA-APDGPVHIHIAEQT-------KEVDDCLAWSGARPVE-WLLDHAPVDARWCLVHATHLTDAETARLAR- 285 (456)
T ss_pred HHHHHHHHHh-cCCCceEEEeCCCH-------HHHHHHHHHcCCCHHH-HHHHcCCCCCCeEEEeeccCCHHHHHHHHH-
Confidence 7899999999 99999999994321 11111100 010 1222 345566666655 5666777765
Q ss_pred cCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCcc
Q 020186 171 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 250 (329)
Q Consensus 171 k~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~ 250 (329)
..+++-.||.. +.. .+. -.+|+| +.+..|.- ..++||..+ . ..
T Consensus 286 --~g~~v~~~P~s-----n~~----lg~---g~~p~~---------~l~~~Gv~-v~lGtD~~~-~------------~d 328 (456)
T PRK09229 286 --SGAVAGLCPTT-----EAN----LGD---GIFPAV---------DYLAAGGR-FGIGSDSHV-S------------ID 328 (456)
T ss_pred --cCCeEEECchh-----hhh----hcC---CCCCHH---------HHHHCCCe-EEEecCCCC-C------------CC
Confidence 46777889953 111 111 124442 33455755 489999421 1 11
Q ss_pred chhHHHHHH-H-HHHH----------hcCCHHHHHHHHhhhhhhhcCCCC------CcccEEEEec
Q 020186 251 NAPVALSLY-A-KVFE----------EMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTKI 298 (329)
Q Consensus 251 ~~e~~lpll-~-~~~~----------~~~~l~~~v~~~s~nPAkifgl~~------~dADlvi~~~ 298 (329)
-++.+-.+. . .... .+++..++.++.+.|+|+.+|+.. |.|||+|+|.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~~~GsLe~Gk~ADlvvld~ 394 (456)
T PRK09229 329 LVEELRLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGRAIGGLAVGARADLVVLDL 394 (456)
T ss_pred HHHHHHHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCCCcCCcCCCCccCEEEEeC
Confidence 111111111 1 1111 244678999999999999999732 2799999953
No 121
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=94.51 E-value=0.61 Score=42.89 Aligned_cols=139 Identities=16% Similarity=0.114 Sum_probs=75.5
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCC--eEEEEecCCHHHHHHHHcccCCceEE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQL--KVVMEHITTMDAVKFVESCKEGFVAA 177 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~--~lhi~HvSt~~sl~~i~~ak~~~vt~ 177 (329)
..+.+.++.++++++||++|+.+..- .+..++ +..+. +. |.|-=| .+.+..+++-
T Consensus 114 ~vf~~ql~lA~~~~~Pv~iH~r~a~~----------~~~~il-----~~~~~~~~~-i~H~fs-G~~~~a~~~l------ 170 (258)
T PRK11449 114 WLLDEQLKLAKRYDLPVILHSRRTHD----------KLAMHL-----KRHDLPRTG-VVHGFS-GSLQQAERFV------ 170 (258)
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccH----------HHHHHH-----HhcCCCCCe-EEEcCC-CCHHHHHHHH------
Confidence 45667778888888888888876421 122222 12221 22 455544 2244444321
Q ss_pred EecchhhhcchhhhcCCCCCCceEEcCCCCC--hhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHH
Q 020186 178 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKR--EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVA 255 (329)
Q Consensus 178 Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~--~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~ 255 (329)
+ .|.++-+++.+-- .+....+.+.+-.+.| .+.||. |+-... ...|-.+....
T Consensus 171 --------------~---~G~~iS~~g~it~~~~~~~~~~~~~ipldri--L~ETD~-P~l~p~-----~~~~~~n~p~~ 225 (258)
T PRK11449 171 --------------Q---LGYKIGVGGTITYPRASKTRDVIAKLPLASL--LLETDA-PDMPLN-----GFQGQPNRPEQ 225 (258)
T ss_pred --------------H---CCCEEEeCccccccCcHHHHHHHHhCChhhE--EEecCC-CCCCCC-----CCCCCCCCChH
Confidence 0 1334444444421 1223345556655565 789995 764211 11233333345
Q ss_pred HHHHHHHHH--hcCCHHHHHHHHhhhhhhhcCC
Q 020186 256 LSLYAKVFE--EMGALDKLEAFTSFNGPDFYGL 286 (329)
Q Consensus 256 lpll~~~~~--~~~~l~~~v~~~s~nPAkifgl 286 (329)
++-.+..+. +..+.+.+.+.+..|-.|+||+
T Consensus 226 ~~~~~~~ia~l~~~~~~el~~~~~~N~~~lf~~ 258 (258)
T PRK11449 226 AARVFDVLCELRPEPADEIAEVLLNNTYTLFNV 258 (258)
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCc
Confidence 665554322 4678999999999999999985
No 122
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=94.03 E-value=2.3 Score=43.33 Aligned_cols=107 Identities=8% Similarity=0.000 Sum_probs=61.4
Q ss_pred ccchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE--E-E--eC-CC--CCHHHHHHHHhcCce
Q 020186 6 ILPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT--L-Y--LT-DT--TSPDEIKLARKTGVV 77 (329)
Q Consensus 6 ~~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~--~-~--~~-~~--~~~~el~~l~~~G~v 77 (329)
-+.+...=|+||+|.=|.-.--+.-.+.++...+.+++ .+ .|+.++.. + + +. .+ -..+++.++.+.--|
T Consensus 96 FA~~Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~-~p--l~~~~~~pScVPat~~Et~Ga~l~a~~i~e~~~~p~V 172 (584)
T COG1001 96 FARAVLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKE-TP--LKVYVMLPSCVPATPFETSGAELTAEDIKELLEHPEV 172 (584)
T ss_pred HHHHhhccCceEEeeCcHHHHhhccHHHHHHHHHHHhh-CC--eEEEEecccCccCCccccCCceecHHHHHHHhhCCCc
Confidence 35677888999999988433334445666666666554 45 67766432 0 0 00 11 134567777664323
Q ss_pred eEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecC
Q 020186 78 FAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGE 121 (329)
Q Consensus 78 ~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaE 121 (329)
.+.==+|++. +. +..+ ..+..-++.+++.|+++-=||=
T Consensus 173 igl~E~Mn~p----gV-i~~D-~~~l~kl~a~~~~~k~VdGHap 210 (584)
T COG1001 173 IGLGEMMNFP----GV-IEGD-PDMLAKLEAARKAGKPVDGHAP 210 (584)
T ss_pred cchhhhcCCc----hh-ccCC-HHHHHHHHHHHHcCCeecccCC
Confidence 2321223321 11 1222 6677888999999999988875
No 123
>PRK08418 chlorohydrolase; Provisional
Probab=93.67 E-value=4.7 Score=39.53 Aligned_cols=154 Identities=14% Similarity=0.185 Sum_probs=87.3
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHH---------------------HHHHHHHHhcCCCeEEEEec
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID---------------------TILQPLIQRLPQLKVVMEHI 158 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~---------------------~~~~~~la~~~~~~lhi~Hv 158 (329)
+.+.++.+.+++.|.++.+|..... .|.+.+. +.+. .+...-+.+..+.|.
T Consensus 190 e~l~~~~~~A~~~~~~i~~H~~E~~-------~E~~~~~~~~G~~~~~~~~~~~~~~~~~~pv~-~l~~~g~~~~~~~H~ 261 (408)
T PRK08418 190 ILAKKALQLAKKENLLVSTHFLESK-------AEREWLEESKGWFKKFFEKFLKEPKPLYTPKE-FLELFKGLRTLFTHC 261 (408)
T ss_pred HHHHHHHHHHHHcCCeEEEEecCCH-------HHHHHHHhccCchhhhhhhhcccccccCCHHH-HHHHhCCCCeEEEec
Confidence 7899999999999999999987532 1111110 1110 122222456778887
Q ss_pred C--CHHHHHHHHcccCCceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCC
Q 020186 159 T--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHE 236 (329)
Q Consensus 159 S--t~~sl~~i~~ak~~~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~ 236 (329)
. +.+.++++++. .+++-.||-- +... +.| .||++ +.+..|.- ..+|||-.+-.
T Consensus 262 ~~~~~~di~~la~~---g~~v~~cP~s-----n~~l--g~g-----~~p~~---------~~~~~Gi~-v~lGtD~~~~~ 316 (408)
T PRK08418 262 VYASEEELEKIKSK---NASITHCPFS-----NRLL--SNK-----ALDLE---------KAKKAGIN-YSIATDGLSSN 316 (408)
T ss_pred ccCCHHHHHHHHHc---CCcEEECHhH-----HHHh--cCC-----CccHH---------HHHhCCCe-EEEeCCCCCCC
Confidence 6 77888888864 4455667731 1111 112 24443 34555654 48999932110
Q ss_pred cCcccccCCcCCccch-hHHHHHHHHHHHh---cCCHHHHHHHHhhhhhhhcCCCCC------cccEEEEec
Q 020186 237 RGRKECACGCAGIYNA-PVALSLYAKVFEE---MGALDKLEAFTSFNGPDFYGLPRN------TSKIKLTKI 298 (329)
Q Consensus 237 ~~eK~~~~~~~Gi~~~-e~~lpll~~~~~~---~~~l~~~v~~~s~nPAkifgl~~~------dADlvi~~~ 298 (329)
....-+ |..+-++ ..++ ..+.++++++.+.|+|+.+|++.| .|||+++|.
T Consensus 317 ----------~~~~~~~em~~~~~--~~~~~~~~~~~~~~l~~aT~~gA~alg~~~G~l~~G~~ADlv~~d~ 376 (408)
T PRK08418 317 ----------ISLSLLDELRAALL--THANMPLLELAKILLLSATRYGAKALGLNNGEIKEGKDADLSVFEL 376 (408)
T ss_pred ----------CCcCHHHHHHHHHH--HhccCCccccHHHHHHHHHHHHHHHhCCCCccccCCCccCEEEEeC
Confidence 011111 1111111 1111 113578999999999999997433 799999953
No 124
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=93.39 E-value=1.8 Score=39.84 Aligned_cols=135 Identities=16% Similarity=0.179 Sum_probs=81.5
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCe--EEEEecCCHHHHHHHHcccCCceEE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK--VVMEHITTMDAVKFVESCKEGFVAA 177 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~--lhi~HvSt~~sl~~i~~ak~~~vt~ 177 (329)
..|..+|+.+++.|++|..|.|+.+. +.+.++. .+|+..|.+ -.|.|-+++.-+ .|
T Consensus 145 ~vl~~a~elA~dvdc~vqLHtes~~~---------~~~~~i~--~~ak~~G~~~~~VVkHha~p~v~-----------~~ 202 (285)
T COG1831 145 EVLEYAMELAKDVDCAVQLHTESLDE---------ETYEEIA--EMAKEAGIKPYRVVKHHAPPLVL-----------KC 202 (285)
T ss_pred HHHHHHHHHhhcCCCcEEEecCCCCh---------HHHHHHH--HHHHHhCCCcceeEeecCCccch-----------hh
Confidence 67788899999999999999997642 2233333 567777752 124444332211 11
Q ss_pred EecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHH
Q 020186 178 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALS 257 (329)
Q Consensus 178 Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lp 257 (329)
| . .| ++|.+- ..|+...+++..|.- |++-||. ..++..|...-|--+ +|
T Consensus 203 ~-----------~-----~G----i~pSV~--asr~~v~~a~~~g~~-FmmETDy----IDDp~RpgavL~Pkt----VP 251 (285)
T COG1831 203 E-----------E-----VG----IFPSVP--ASRKNVEDAAELGPR-FMMETDY----IDDPRRPGAVLGPKT----VP 251 (285)
T ss_pred h-----------h-----cC----cCCccc--ccHHHHHHHHhcCCc-eEeeccc----ccCcccCCCcCCccc----hh
Confidence 1 0 11 234332 445578888888887 6999997 345544433334443 34
Q ss_pred H-HHHHHHh-cCCHHHHHHHHhhhhhhhcCCC
Q 020186 258 L-YAKVFEE-MGALDKLEAFTSFNGPDFYGLP 287 (329)
Q Consensus 258 l-l~~~~~~-~~~l~~~v~~~s~nPAkifgl~ 287 (329)
= ....+.+ ..+-+.+.+..-+||.++||+.
T Consensus 252 rr~~~i~~~g~~~ee~vy~i~~E~pe~VYg~~ 283 (285)
T COG1831 252 RRTREILEKGDLTEEDVYRIHVENPERVYGIE 283 (285)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhCHHHHhCcc
Confidence 2 1122222 3468899999999999999973
No 125
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=93.19 E-value=0.088 Score=50.79 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=32.0
Q ss_pred cCCHHHHHHHHhhhhhhhcCCC-C-C------cccEEEEecceeec
Q 020186 266 MGALDKLEAFTSFNGPDFYGLP-R-N------TSKIKLTKIPWKVP 303 (329)
Q Consensus 266 ~~~l~~~v~~~s~nPAkifgl~-~-~------dADlvi~~~~~~v~ 303 (329)
..++++.+++.|.||||.+||. + | +||||++|+.+.|.
T Consensus 324 ~~~~~eAv~maS~~PA~~lgl~~~~G~i~~G~~Adlvvld~d~~v~ 369 (380)
T COG1820 324 GISLAEAVRMASLNPAKALGLDDRLGSIKPGKDADLVVLDDDLNVK 369 (380)
T ss_pred CCCHHHHHHHhhhhHHHHhCCcCcccccCCCcccCEEEECCCCcEE
Confidence 4589999999999999999984 3 3 89999997766664
No 126
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=91.80 E-value=2.2 Score=41.60 Aligned_cols=137 Identities=16% Similarity=0.141 Sum_probs=86.8
Q ss_pred chhcccCccEEEEC---CC--CCCCCCc--HHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEE
Q 020186 8 PICSVSHYGRAIVM---PN--LKPPITT--TAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAV 80 (329)
Q Consensus 8 ~~Aa~GGvTtvidm---Pn--t~p~~~~--~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~ 80 (329)
..|+++|+||++-= |. |+-...+ +=.+++..+.++. -+ ++++|.+- ++......|.+..++|+ +++
T Consensus 145 ~~Al~sGiTtmiGGGtGpa~Gt~aTT~TpG~w~i~rMl~a~d~-~p--~N~g~lgK---Gn~s~~~~L~Eqi~aGa-~Gl 217 (568)
T COG0804 145 EEALASGITTMIGGGTGPADGTNATTCTPGPWHIARMLQAADG-LP--MNIGFLGK---GNASNPAPLAEQIEAGA-IGL 217 (568)
T ss_pred HHHHhcCcEEEecCccCCCCCcccccccCCHHHHHHHHHhhhc-Cc--eeeEEeec---CCCCCchhHHHHHhhcc-cee
Confidence 46889999999865 32 2222222 2234444444433 23 78887652 44445677888889996 599
Q ss_pred EEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 020186 81 KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT 160 (329)
Q Consensus 81 K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt 160 (329)
|+.-.+ +-+- ..+..+|.-+-+.++-|.+|...= .|.-.|.. .++..-|.-+|-.|.--
T Consensus 218 KlHEDW-------G~Tp--aaI~~~L~VAD~~DvqVaiHtDTL--------NEsGfvEd----Ti~A~~gRtIHtyHtEG 276 (568)
T COG0804 218 KLHEDW-------GATP--AAIDTCLSVADEYDVQVAIHTDTL--------NESGFVED----TIAAIKGRTIHTYHTEG 276 (568)
T ss_pred Eeeccc-------CCCH--HHHHHHHhhhhhhceEEEEeeccc--------ccccchHh----HHHHhcCceeEEeeccC
Confidence 998543 3333 678889999999999999998732 12223332 34556688889988763
Q ss_pred ---HHHHHHHHcccC
Q 020186 161 ---MDAVKFVESCKE 172 (329)
Q Consensus 161 ---~~sl~~i~~ak~ 172 (329)
.-+=++|+-+..
T Consensus 277 AGGGHAPDiikv~~~ 291 (568)
T COG0804 277 AGGGHAPDIIKVAGQ 291 (568)
T ss_pred CCCCCccHHHHHccC
Confidence 335567776643
No 127
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=91.13 E-value=4.4 Score=37.30 Aligned_cols=80 Identities=16% Similarity=0.159 Sum_probs=49.0
Q ss_pred ceEEcCCCCChh--hHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHHHHH--hcCCHHHHHH
Q 020186 199 HNYCLPVLKREI--HRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE--EMGALDKLEA 274 (329)
Q Consensus 199 ~~k~~PPLR~~~--dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~~--~~~~l~~~v~ 274 (329)
++-+++.+--+. +-+.+.+.+=...+ .+=||. |+-. |.+.-|-.+-+..++...+.+. +.++.+.+.+
T Consensus 173 yisisG~itfk~a~~~~ev~~~iPldrL--L~ETDs-Pyl~-----P~p~rGkrNeP~~v~~v~~~iAelk~~~~eeva~ 244 (256)
T COG0084 173 YISISGIVTFKNAEKLREVARELPLDRL--LLETDA-PYLA-----PVPYRGKRNEPAYVRHVAEKLAELKGISAEEVAE 244 (256)
T ss_pred EEEECceeecCCcHHHHHHHHhCCHhHe--EeccCC-CCCC-----CcCCCCCCCCchHHHHHHHHHHHHhCCCHHHHHH
Confidence 444444444443 44455555544444 567885 7742 2122354444456666665443 4779999999
Q ss_pred HHhhhhhhhcCC
Q 020186 275 FTSFNGPDFYGL 286 (329)
Q Consensus 275 ~~s~nPAkifgl 286 (329)
.++.|--|+||+
T Consensus 245 ~t~~N~~~lf~~ 256 (256)
T COG0084 245 ITTENAKRLFGL 256 (256)
T ss_pred HHHHHHHHHhcC
Confidence 999999999985
No 128
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=90.79 E-value=6.2 Score=38.80 Aligned_cols=158 Identities=14% Similarity=0.122 Sum_probs=83.9
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCC-CCCChhHHH---HHHHHHHHHHHHHhcCCCeEEEEecC--CHHHHHHHHcccCC
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTD-PIVDIFDRE---KVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEG 173 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~-~~~~~~~~E---~~av~~~~~~~la~~~~~~lhi~HvS--t~~sl~~i~~ak~~ 173 (329)
+.+..+.+.+++.|.++.+|+-... .+ ....| ...+.+. ......+-+..+.|.. +.+.++++++ .
T Consensus 198 ~~~~~~~~l~~~~~~~v~iH~~E~~~e~--~~~~~~~g~~~~~~~---~~~g~l~~~~~~~H~~~~~~~e~~~l~~---~ 269 (421)
T COG0402 198 ELLESLDELARKYGLPVHIHLAETLDEV--ERVLEPYGARPVERL---DLLGLLGSHTLLAHCVHLSEEELELLAE---S 269 (421)
T ss_pred HHHHHHHHHHhcCCCceEEEecCcHHHH--HHHHhhcCCCHHHHH---HHcCCCCCCeEEEEeccCCHHHHHHHhh---C
Confidence 6777777777888999999976442 10 00111 0011111 1222334566666665 4556666663 4
Q ss_pred ceEEEecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccch-
Q 020186 174 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA- 252 (329)
Q Consensus 174 ~vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~- 252 (329)
.+++=.||= .+.. ++.. +.| +++.+..|.- ..++||-+.+... ..-+
T Consensus 270 g~~v~~cP~------sN~~---L~sG--~~p----------~~~~~~~gv~-v~~gTD~~~~~~~----------~d~l~ 317 (421)
T COG0402 270 GASVVHCPR------SNLK---LGSG--IAP----------VRRLLERGVN-VALGTDGAASNNV----------LDMLR 317 (421)
T ss_pred CCeEEECcc------hhcc---ccCC--CCC----------HHHHHHcCCC-EEEecCCccccCh----------HHHHH
Confidence 677778881 1211 1212 223 4455666743 4899997655310 0001
Q ss_pred hHHHHHHHHHHHh-cC-CHH--HHHHHHhhhhhhhcCC------CC-CcccEEEEe
Q 020186 253 PVALSLYAKVFEE-MG-ALD--KLEAFTSFNGPDFYGL------PR-NTSKIKLTK 297 (329)
Q Consensus 253 e~~lpll~~~~~~-~~-~l~--~~v~~~s~nPAkifgl------~~-~dADlvi~~ 297 (329)
|.....++..... .. +.. ++.++.+.|+||.||+ .. ++|||+++|
T Consensus 318 ~~~~a~~l~~~~~~~~~~~~~~~~l~~aT~~gA~alg~~~~G~le~G~~ADlvvld 373 (421)
T COG0402 318 EMRTADLLQKLAGGLLAAQLPGEALDMATLGGAKALGLDDIGSLEVGKKADLVVLD 373 (421)
T ss_pred HHHHHHHHHHhhcCCCcccchHHHHHHHHhhHHHHcCCcccCCcccccccCEEEEc
Confidence 1122222222222 11 222 2789999999999994 12 279999994
No 129
>PRK10425 DNase TatD; Provisional
Probab=90.32 E-value=7.8 Score=35.62 Aligned_cols=67 Identities=22% Similarity=0.198 Sum_probs=40.0
Q ss_pred HHHHHHcCCCCeEEecCCCCCCcCcccccCCc-CCccchhHHHHHHHHHHH--hcCCHHHHHHHHhhhhhhhcCC
Q 020186 215 VVSAVTSGSRKFFLGTDSAPHERGRKECACGC-AGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYGL 286 (329)
Q Consensus 215 Lw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~-~Gi~~~e~~lpll~~~~~--~~~~l~~~v~~~s~nPAkifgl 286 (329)
+.+.+--..| ++-||- |+....... +. -|-.+-...++-.++.+. +.++.+.+.+.+..|--++||+
T Consensus 189 ~~~~ipldrl--LlETDa-P~l~P~~~~--~~~~~~~n~P~~i~~v~~~iA~l~~~~~~~v~~~~~~N~~~lf~~ 258 (258)
T PRK10425 189 LLPLIPAERL--LLETDA-PYLLPRDLT--PKPASRRNEPAFLPHILQRIAHWRGEDAAWLAATTDANARTLFGL 258 (258)
T ss_pred HHHhCChHHE--EEeccC-CCCCCCCcC--CCCCCCCCCcHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCc
Confidence 3344433443 677884 764321100 11 133333456666665443 4679999999999999999985
No 130
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=88.91 E-value=0.5 Score=44.70 Aligned_cols=154 Identities=11% Similarity=0.096 Sum_probs=75.8
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCC---eEEEEecCCHHHHHHHHcc-cC-Cc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQL---KVVMEHITTMDAVKFVESC-KE-GF 174 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~---~lhi~HvSt~~sl~~i~~a-k~-~~ 174 (329)
..++.+-+..+++|+++++|++-... . ...+.+++ +..|+ ++.|+|+-...-++.+++. ++ ..
T Consensus 142 k~lrAaa~A~~~TG~pI~~H~~~g~~----~---~~e~~~il-----~e~Gv~~~rvvigH~D~~~D~~y~~~la~~G~~ 209 (308)
T PF02126_consen 142 KVLRAAARAHKETGAPISTHTGRGTR----M---GLEQLDIL-----EEEGVDPSRVVIGHMDRNPDLDYHRELADRGVY 209 (308)
T ss_dssp HHHHHHHHHHHHHT-EEEEEESTTGT----C---HHHHHHHH-----HHTT--GGGEEETSGGGST-HHHHHHHHHTT-E
T ss_pred HHHHHHHHHHHHhCCeEEEcCCCCCc----C---HHHHHHHH-----HHcCCChhHeEEeCCCCCCCHHHHHHHHhcCCE
Confidence 34444455567889999999986531 0 11222222 23343 6999999866666655543 22 33
Q ss_pred eEEEecchhhhcchhhhcCCCCCCceEEcCCCC--ChhhHH-HHHHHHHcCCCC-eEEecCCCCCCcCcccccCCcC--C
Q 020186 175 VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLK--REIHRQ-AVVSAVTSGSRK-FFLGTDSAPHERGRKECACGCA--G 248 (329)
Q Consensus 175 vt~Et~phhL~l~~~~~~~~~~~~~~k~~PPLR--~~~dr~-aLw~al~~G~Id-~~i~SDHaPh~~~eK~~~~~~~--G 248 (329)
+..++.-+.++ | +..||.+. +.++|- .|.+.+.+|.-| ++++.|=+-.+ +...++.. |
T Consensus 210 l~~D~~g~~~~-----------g--~~~~~~~~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~k~---~~~~~gg~g~~ 273 (308)
T PF02126_consen 210 LEFDTIGREFS-----------G--KDKNPRVGYPPDEERIELLKELIEEGYADQILLSHDIGRKS---RLYRYGGGGYG 273 (308)
T ss_dssp EEETTTT-B-T-----------T--TTTCHSCTTS-HHHHHHHHHHHHHTTTGGGEEE-HHHESEE---GSSSCCHHHHT
T ss_pred EEecCCccccc-----------C--cccCccCCCCCHHHHHHHHHHHHHcCCcCcEEEeccccccc---cccccCCCCcc
Confidence 44333322110 0 00112222 234444 455666688764 35666643211 11122222 3
Q ss_pred ccch-hHHHHHHHHHHHhcCCHHHHHHHHhhhhhhhc
Q 020186 249 IYNA-PVALSLYAKVFEEMGALDKLEAFTSFNGPDFY 284 (329)
Q Consensus 249 i~~~-e~~lpll~~~~~~~~~l~~~v~~~s~nPAkif 284 (329)
..-+ +.++|.|- .+.++-+++-+++..||+|+|
T Consensus 274 ~~~i~~~fiP~L~---~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 274 YIYILTRFIPRLK---ERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp TTHHHHTHHHHHH---HTTS-HHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHH---HcCCCHHHHHHHHHHCHHHHc
Confidence 2221 44555443 246789999999999999987
No 131
>smart00518 AP2Ec AP endonuclease family 2. These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites
Probab=88.60 E-value=13 Score=33.92 Aligned_cols=90 Identities=12% Similarity=0.070 Sum_probs=55.7
Q ss_pred HHHHHHHHhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCC-CCCC-Ch--hHHHHHHHHHH
Q 020186 65 PDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVT-DPIV-DI--FDREKVFIDTI 140 (329)
Q Consensus 65 ~~el~~l~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~-~~~~-~~--~~~E~~av~~~ 140 (329)
...+..+.+.|. -++.+|+.......+...++ ..+.++-+.+++.|+.+++|+--. .+.. +. +......+.+.
T Consensus 13 ~~~~~~~~~~G~-~~vel~~~~~~~~~~~~~~~--~~~~~l~~~~~~~gl~ls~h~p~~~nl~s~d~~~r~~~~~~l~~~ 89 (273)
T smart00518 13 YKAFIEAVDIGA-RSFQLFLGNPRSWKGVRLSE--ETAEKFKEALKENNIDVSVHAPYLINLASPDKEKVEKSIERLIDE 89 (273)
T ss_pred hHHHHHHHHcCC-CEEEEECCCCCCCCCCCCCH--HHHHHHHHHHHHcCCCEEEECCceecCCCCCHHHHHHHHHHHHHH
Confidence 356788888884 68888875432111112222 456666667788899999997421 1111 11 22334456777
Q ss_pred HHHHHHhcCCCeEEEEecC
Q 020186 141 LQPLIQRLPQLKVVMEHIT 159 (329)
Q Consensus 141 ~~~~la~~~~~~lhi~HvS 159 (329)
+ .+|+..|++..++|..
T Consensus 90 i--~~A~~lGa~~vv~h~g 106 (273)
T smart00518 90 I--KRCEELGIKALVFHPG 106 (273)
T ss_pred H--HHHHHcCCCEEEEccc
Confidence 7 7899999998888874
No 132
>PRK09358 adenosine deaminase; Provisional
Probab=87.49 E-value=8 Score=36.74 Aligned_cols=69 Identities=10% Similarity=-0.028 Sum_probs=43.2
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecC-CHHHHHHHHcccCCceEEE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESCKEGFVAAT 178 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvS-t~~sl~~i~~ak~~~vt~E 178 (329)
..+.++++.+++.|.++.+|+....- .. .+...+ ... -+..=.|-+|++ .++.++++++ ..+.+|
T Consensus 182 ~~~~~~~~~A~~~g~~~~~H~~E~~~-----~~---~~~~al--~~l-g~~ri~Hg~~l~~~~~~~~~l~~---~gi~v~ 247 (340)
T PRK09358 182 SKFARAFDRARDAGLRLTAHAGEAGG-----PE---SIWEAL--DEL-GAERIGHGVRAIEDPALMARLAD---RRIPLE 247 (340)
T ss_pred HHHHHHHHHHHHCCCCeEEcCCCCCc-----hh---HHHHHH--HHc-CCcccchhhhhccCHHHHHHHHH---cCCeEE
Confidence 67889999999999999999974311 01 122222 101 011113555555 4567777775 478999
Q ss_pred ecch
Q 020186 179 VTPQ 182 (329)
Q Consensus 179 t~ph 182 (329)
+||-
T Consensus 248 ~cP~ 251 (340)
T PRK09358 248 VCPT 251 (340)
T ss_pred ECCC
Confidence 9996
No 133
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=85.45 E-value=1.4 Score=43.10 Aligned_cols=33 Identities=12% Similarity=0.229 Sum_probs=28.9
Q ss_pred cCCHHHHHHHHhhhhhhhcCC-CCC------cccEEEEec
Q 020186 266 MGALDKLEAFTSFNGPDFYGL-PRN------TSKIKLTKI 298 (329)
Q Consensus 266 ~~~l~~~v~~~s~nPAkifgl-~~~------dADlvi~~~ 298 (329)
.+||++.|+.|+..+|+-||| ++| .|||+|||-
T Consensus 473 ~l~Le~av~rmT~~~Ae~~GL~drGlvreG~rADl~viDp 512 (579)
T COG3653 473 LLSLERAVRRMTGELAEWFGLGDRGLVREGDRADLVVIDP 512 (579)
T ss_pred cccHHHHHHHHhccHHHHhCcccccccccccccceEEEcc
Confidence 469999999999999999999 455 699999953
No 134
>PRK01060 endonuclease IV; Provisional
Probab=81.15 E-value=44 Score=30.52 Aligned_cols=89 Identities=10% Similarity=0.085 Sum_probs=49.9
Q ss_pred HHHHHHHhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCc---EEEecCCC-CCC-CCh--hHHHHHHHH
Q 020186 66 DEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMP---LLVHGEVT-DPI-VDI--FDREKVFID 138 (329)
Q Consensus 66 ~el~~l~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~---v~vHaEd~-~~~-~~~--~~~E~~av~ 138 (329)
+.+..+.+.|. -++.+|+..........+++ ..+.+.-+.+++.|+. +.+|+--. .+. .+. +......+.
T Consensus 16 ~~l~~~~~~G~-d~vEl~~~~p~~~~~~~~~~--~~~~~lk~~~~~~gl~~~~~~~h~~~~~nl~~~d~~~r~~s~~~~~ 92 (281)
T PRK01060 16 GAVAEAAEIGA-NAFMIFTGNPQQWKRKPLEE--LNIEAFKAACEKYGISPEDILVHAPYLINLGNPNKEILEKSRDFLI 92 (281)
T ss_pred HHHHHHHHcCC-CEEEEECCCCCCCcCCCCCH--HHHHHHHHHHHHcCCCCCceEEecceEecCCCCCHHHHHHHHHHHH
Confidence 44677777784 68888875221111111222 4455555566777776 67777421 111 111 223344566
Q ss_pred HHHHHHHHhcCCCeEEEEecC
Q 020186 139 TILQPLIQRLPQLKVVMEHIT 159 (329)
Q Consensus 139 ~~~~~~la~~~~~~lhi~HvS 159 (329)
+.+ .+|+..|++..++|..
T Consensus 93 ~~i--~~A~~lga~~vv~h~G 111 (281)
T PRK01060 93 QEI--ERCAALGAKLLVFHPG 111 (281)
T ss_pred HHH--HHHHHcCCCEEEEcCC
Confidence 666 7888889988888865
No 135
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=78.61 E-value=59 Score=30.54 Aligned_cols=67 Identities=13% Similarity=0.027 Sum_probs=41.8
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCe--EEEEecC-CHHHHHHHHcccCCceE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK--VVMEHIT-TMDAVKFVESCKEGFVA 176 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~--lhi~HvS-t~~sl~~i~~ak~~~vt 176 (329)
..+.++++.+++.|.++.+|+....- . .+ +...+ +..|+. .|-++++ +++.++++++ ..+.
T Consensus 172 ~~~~~~~~~A~~~g~~i~~Ha~E~~~---~--~~---~~~~~-----~~~g~~ri~Hg~~l~~~~~~i~~l~~---~gi~ 235 (324)
T TIGR01430 172 PDFVRAFAIARELGLHLTVHAGELGG---P--ES---VREAL-----DDLGATRIGHGVRALEDPELLKRLAQ---ENIT 235 (324)
T ss_pred HHHHHHHHHHHHCCCCeEEecCCCCC---h--HH---HHHHH-----HHcCchhcchhhhhccCHHHHHHHHH---cCce
Confidence 67889999999999999999974311 0 01 11111 112322 3444443 3567777775 4789
Q ss_pred EEecch
Q 020186 177 ATVTPQ 182 (329)
Q Consensus 177 ~Et~ph 182 (329)
+|+||.
T Consensus 236 v~~cP~ 241 (324)
T TIGR01430 236 LEVCPT 241 (324)
T ss_pred EEECCc
Confidence 999995
No 136
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=75.78 E-value=2 Score=39.67 Aligned_cols=38 Identities=11% Similarity=0.176 Sum_probs=31.4
Q ss_pred CCHHHHHHHHhhhhhhhcCCC-CC-------cccEEEEecceeecC
Q 020186 267 GALDKLEAFTSFNGPDFYGLP-RN-------TSKIKLTKIPWKVPE 304 (329)
Q Consensus 267 ~~l~~~v~~~s~nPAkifgl~-~~-------dADlvi~~~~~~v~~ 304 (329)
-|++-..+..+-.||+++|+. +| |||||++|+.-+|.+
T Consensus 349 Cs~e~AleaAtlhPAqlLg~ek~KGTLDfG~dADFVllDd~l~V~a 394 (407)
T KOG3892|consen 349 CSMESALEAATLHPAQLLGLEKSKGTLDFGADADFVLLDDSLHVQA 394 (407)
T ss_pred CcHHHHHhhhccChHHhhccccccccccccccCceEEEccceEEEE
Confidence 389999999999999999994 33 799999976666653
No 137
>PTZ00372 endonuclease 4-like protein; Provisional
Probab=75.02 E-value=91 Score=30.84 Aligned_cols=103 Identities=14% Similarity=-0.014 Sum_probs=62.0
Q ss_pred ccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCC---cEEEecCCCCC
Q 020186 49 SNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNM---PLLVHGEVTDP 125 (329)
Q Consensus 49 vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~---~v~vHaEd~~~ 125 (329)
+-++.|.++ . +.-..-+....+.|+ .+|-+|+...-+-....+++ ..+.+.-+.+++.|+ ++++|+--. +
T Consensus 131 ~~iGaHvSi--a-GG~~~a~~~a~~~g~-~afqiF~~npr~w~~~~~~~--~~~~~f~~~~~~~gi~~~~i~~HapYl-I 203 (413)
T PTZ00372 131 VYIGAHVSA--S-GGVDNSPINAYNIAG-QAFALFLKNQRTWNSPPLSD--ETIDKFKENCKKYNYDPKFILPHGSYL-I 203 (413)
T ss_pred ceEEEEEec--c-ccHHHHHHHHHHcCC-CEEEEEcCCCccCCCCCCCH--HHHHHHHHHHHHcCCCcceEEeecCce-e
Confidence 677888775 2 322334566667785 69999974311101112333 556666666777764 377898632 1
Q ss_pred CC---Ch--hHHHHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 020186 126 IV---DI--FDREKVFIDTILQPLIQRLPQLKVVMEHITT 160 (329)
Q Consensus 126 ~~---~~--~~~E~~av~~~~~~~la~~~~~~lhi~HvSt 160 (329)
.. +. +..-...+.+.+ ..|+..|++..+.|-.+
T Consensus 204 NLASpd~e~rekSv~~~~~eL--~rA~~LGa~~VV~HPGs 241 (413)
T PTZ00372 204 NLANPDKEKREKSYDAFLDDL--QRCEQLGIKLYNFHPGS 241 (413)
T ss_pred cCCCCCHHHHHHHHHHHHHHH--HHHHHcCCCEEEECCCc
Confidence 11 11 222235566667 78999999999999876
No 138
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=71.97 E-value=39 Score=31.88 Aligned_cols=153 Identities=14% Similarity=0.102 Sum_probs=79.3
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCC-CeEEEEecC-CHHHHHHHHcccCCceEE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ-LKVVMEHIT-TMDAVKFVESCKEGFVAA 177 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~-~~lhi~HvS-t~~sl~~i~~ak~~~vt~ 177 (329)
..++.+-+..+++|.|+++|.+-..+. ....+++ ..+-.+ .++.|+|+- +..-+.-.+..+..-++
T Consensus 152 k~lrAaA~A~~~Tg~Pi~tHt~~gt~g--------~eq~~il---~~egvdl~~v~igH~d~n~dd~~y~~~l~~~Ga~- 219 (316)
T COG1735 152 KSLRAAARAHKETGAPISTHTPAGTMG--------LEQLRIL---AEEGVDLRKVSIGHMDPNTDDVYYQKKLADRGAF- 219 (316)
T ss_pred HHHHHHHHHhhhcCCCeEEeccchhhh--------HHHHHHH---HHcCCChhHeeEeccCCCCChHHHHHHHHhcCce-
Confidence 566666677788899999998855321 1122222 222122 468899998 66666555544321222
Q ss_pred EecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHH-HHHHHHcCCCCeEEec-CCCCCCcCc--ccccCCcC--Cccc
Q 020186 178 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQA-VVSAVTSGSRKFFLGT-DSAPHERGR--KECACGCA--GIYN 251 (329)
Q Consensus 178 Et~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~a-Lw~al~~G~Id~~i~S-DHaPh~~~e--K~~~~~~~--Gi~~ 251 (329)
|.||. + + .-+.. +.++|.+ +.+.+.+|.-|-+.-| |-+...... |..+.+.. |.--
T Consensus 220 ------l~fD~--i---G---~d~y~----pd~~r~~~~~~l~~~gy~d~i~ls~d~~~~~~~~~~~~~~~~~~~~g~~~ 281 (316)
T COG1735 220 ------LEFDR--I---G---KDKYY----PDEDRIAPLLELVARGYADLILLSHDDICLSDDVFLKSMLKANGGWGYGY 281 (316)
T ss_pred ------EEecc--c---C---ccccC----cHHHhhhhHHHHHHhhHhhheecccchhhhhhhHHHHhhhhhcCCcccch
Confidence 22321 1 1 11112 2556554 5566667776633346 433332222 22111111 2221
Q ss_pred h-hHHHHHHHHHHHh-cCCHHHHHHHHhhhhhhhcCC
Q 020186 252 A-PVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGL 286 (329)
Q Consensus 252 ~-e~~lpll~~~~~~-~~~l~~~v~~~s~nPAkifgl 286 (329)
+ ..++|. +++ .++=+.+-.++-.||+|+|.-
T Consensus 282 I~~~fIP~----Lk~~Gvde~~i~~mlvdNP~r~f~~ 314 (316)
T COG1735 282 ILNDFIPR----LKRHGVDEETIDTMLVDNPARLFTA 314 (316)
T ss_pred hhHhhHHH----HHHcCCCHHHHHHHHhhCHHHHhcc
Confidence 1 123333 333 568778888999999999974
No 139
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=70.28 E-value=18 Score=34.18 Aligned_cols=134 Identities=10% Similarity=0.029 Sum_probs=72.9
Q ss_pred HhcCCCeEEEEecCCHHHHHHHHcccCCceEEE-----ecchhhhcchhhhcCC-CCCCceEE--cCC-CC--ChhhHHH
Q 020186 146 QRLPQLKVVMEHITTMDAVKFVESCKEGFVAAT-----VTPQHLVLNRNALFQG-GLRPHNYC--LPV-LK--REIHRQA 214 (329)
Q Consensus 146 a~~~~~~lhi~HvSt~~sl~~i~~ak~~~vt~E-----t~phhL~l~~~~~~~~-~~~~~~k~--~PP-LR--~~~dr~a 214 (329)
....|.=+=+.|+|-+...++++.+++.-|..- +|+|.=-++++.+..- ..|...-+ .|+ ++ ...+.+.
T Consensus 163 mn~lGmiiDvSH~s~~~~~dv~~~s~~PviaSHsn~ral~~h~RNltD~~i~~ia~~GGvigi~~~~~fl~~~~~~~~~~ 242 (309)
T cd01301 163 MNRLGIIIDLSHLSERTFWDVLDISNAPVIASHSNARALCDHPRNLTDAQLKAIAETGGVIGVNFYPAFLSPGADATLDD 242 (309)
T ss_pred HHHcCCEEEcCCCCHHHHHHHHHhcCCCEEEeccChHHhcCCCCCCCHHHHHHHHHcCCEEEEeeeHHHhCCCCCCCHHH
Confidence 345788888999999999999988764223333 3555555777765321 01222221 222 21 1345555
Q ss_pred HHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHHHHHHHH-hcCCHHHHHHHHhhhhhh
Q 020186 215 VVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE-EMGALDKLEAFTSFNGPD 282 (329)
Q Consensus 215 Lw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~~-~~~~l~~~v~~~s~nPAk 282 (329)
+.+.+.- .++ .+|.||......--.....+.|+.+.. -+|-+...+. +..|-+++-+++..|+-|
T Consensus 243 ~~~hi~~-i~~-l~G~dhVgiGsDfdg~~~~~~gl~~~~-~~~~l~~~L~~rG~s~~~i~~i~g~N~lR 308 (309)
T cd01301 243 VVRHIDY-IVD-LIGIDHVGLGSDFDGIGGTPGGLEDVS-DLPNLTAELLERGYSEEEIEKIAGGNFLR 308 (309)
T ss_pred HHHHHHH-HHH-hcCCCeEEECcccCCCCCCccccCCHH-HHHHHHHHHHHcCCCHHHHHHHHhhchhc
Confidence 6666542 233 344444433221000011123666553 5666665554 456889999999988765
No 140
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=68.23 E-value=4.8 Score=39.36 Aligned_cols=54 Identities=20% Similarity=0.207 Sum_probs=37.4
Q ss_pred cCCHHHHHHHHhhhhhhhcCCCC-C-------cccEEEEe-cceeecCCc-------cCcCCcccccCCCc
Q 020186 266 MGALDKLEAFTSFNGPDFYGLPR-N-------TSKIKLTK-IPWKVPEAF-------SFSFGDIIPMFAGN 320 (329)
Q Consensus 266 ~~~l~~~v~~~s~nPAkifgl~~-~-------dADlvi~~-~~~~v~~~~-------~~s~~~~spf~~G~ 320 (329)
..++.++..++-.||||.+||+. | ||||.|+| ..-+|+..+ -.+++.|+.- .|.
T Consensus 437 E~t~~eia~~TRa~~ak~lgl~e~kGhLg~GadadIaiYdlnP~~vDps~dye~v~kaf~~A~ytlK-~Ge 506 (575)
T COG1229 437 ELTLYELAIMTRANPAKVLGLSERKGHLGVGADADIAIYDLNPEQVDPSNDYEKVEKAFRKAAYTLK-GGE 506 (575)
T ss_pred cccHHHHHHHHhcChhhhcccccccCccCcCccCceEEEecChhhcCCcccHHHHHHHHhheeEEec-Cce
Confidence 35789999999999999999964 3 89999994 344454222 1345555555 554
No 141
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=61.92 E-value=1.1e+02 Score=27.75 Aligned_cols=135 Identities=21% Similarity=0.239 Sum_probs=67.2
Q ss_pred cccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCC-CC--ccEEEEEEEEeCCCCCHH-------HHHHHHh-cCceeE
Q 020186 11 SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALP-AS--SNFTPLMTLYLTDTTSPD-------EIKLARK-TGVVFA 79 (329)
Q Consensus 11 a~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~-~~--vd~~~~~~~~~~~~~~~~-------el~~l~~-~G~v~~ 79 (329)
+..|+-+|+......-|..+++.+.+..+++-..-. ++ .-+..+.++.+.+...+. ++.++.. .+++ +
T Consensus 21 a~sGI~~Vit~AhdP~~~~~~~v~~~h~~rl~~~E~~Ra~~~Gl~~~vavGvHPr~iP~e~~~~l~~L~~~l~~e~Vv-A 99 (254)
T COG1099 21 ALSGIREVITLAHDPYPMKTAEVYLDHFRRLLGVEPERAEKAGLKLKVAVGVHPRAIPPELEEVLEELEELLSNEDVV-A 99 (254)
T ss_pred HHhChhhhhhcccCCCCcccHHHHHHHHHHHHccchhhHHhhCceeeEEeccCCCCCCchHHHHHHHHHhhcccCCee-E
Confidence 345777777775433456678877777776543210 00 112233343223222222 2333322 2322 2
Q ss_pred E-EEeeccccccCCCCccCh-HHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCe---EE
Q 020186 80 V-KLYPAGATTNSQDGVTDL-FGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK---VV 154 (329)
Q Consensus 80 ~-K~f~~~~~~~~~~~~~d~-~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~---lh 154 (329)
+ .+=. ...+|. -+.+.+-|+.++++|.|++||.=...- .+++.+++ .+....|.+ +.
T Consensus 100 iGEiGL--------e~~t~~E~evf~~QL~LA~e~dvPviVHTPr~nK--------~e~t~~il--di~~~~~l~~~lvv 161 (254)
T COG1099 100 IGEIGL--------EEATDEEKEVFREQLELARELDVPVIVHTPRRNK--------KEATSKIL--DILIESGLKPSLVV 161 (254)
T ss_pred eeeccc--------ccCCHHHHHHHHHHHHHHHHcCCcEEEeCCCCcc--------hhHHHHHH--HHHHHcCCChhhee
Confidence 2 1100 011221 156777788899999999999653321 23455566 555544543 66
Q ss_pred EEecCCHHHHH
Q 020186 155 MEHITTMDAVK 165 (329)
Q Consensus 155 i~HvSt~~sl~ 165 (329)
|-|+ +.+.++
T Consensus 162 IDH~-N~etv~ 171 (254)
T COG1099 162 IDHV-NEETVD 171 (254)
T ss_pred hhcc-cHHHHH
Confidence 7776 345555
No 142
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac). It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A.
Probab=58.07 E-value=1.3e+02 Score=27.32 Aligned_cols=72 Identities=15% Similarity=0.314 Sum_probs=36.3
Q ss_pred HHHHHHHHhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHH
Q 020186 65 PDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPL 144 (329)
Q Consensus 65 ~~el~~l~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~ 144 (329)
.+.+..|.+.| +..+|+= +. .+.+ ...+++++++|+|+++-..-.. ..|. .+++. .
T Consensus 79 ~~s~d~l~~~~-~~~~KIa----S~----dl~n-----~~lL~~~A~tgkPvIlSTG~st------l~EI---~~Av~-~ 134 (241)
T PF03102_consen 79 EESVDFLEELG-VPAYKIA----SG----DLTN-----LPLLEYIAKTGKPVILSTGMST------LEEI---ERAVE-V 134 (241)
T ss_dssp HHHHHHHHHHT--SEEEE-----GG----GTT------HHHHHHHHTT-S-EEEE-TT--------HHHH---HHHHH-H
T ss_pred HHHHHHHHHcC-CCEEEec----cc----cccC-----HHHHHHHHHhCCcEEEECCCCC------HHHH---HHHHH-H
Confidence 45566665657 5688983 11 1334 3567788899999998655432 2343 33331 2
Q ss_pred HHhcCCCeEEEEecCC
Q 020186 145 IQRLPQLKVVMEHITT 160 (329)
Q Consensus 145 la~~~~~~lhi~HvSt 160 (329)
+-+..+.++.+.|..+
T Consensus 135 ~~~~~~~~l~llHC~s 150 (241)
T PF03102_consen 135 LREAGNEDLVLLHCVS 150 (241)
T ss_dssp HHHHCT--EEEEEE-S
T ss_pred HHhcCCCCEEEEecCC
Confidence 2345567788888765
No 143
>TIGR00587 nfo apurinic endonuclease (APN1). All proteins in this family for which functions are known are 5' AP endonculeases that are used in base excision repair and the repair of abasic sites in DNA.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=57.79 E-value=1.5e+02 Score=27.09 Aligned_cols=102 Identities=11% Similarity=0.010 Sum_probs=55.4
Q ss_pred EEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCc---EEEecCCC-CCC
Q 020186 51 FTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMP---LLVHGEVT-DPI 126 (329)
Q Consensus 51 ~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~---v~vHaEd~-~~~ 126 (329)
++.|.++ . +.-.+.++.+.+.|+ .+|.+|+..........++. ....+.-+..++.+.. +.+|+=-. .+.
T Consensus 3 ~g~h~s~--~-g~~~~a~~~~~~~G~-~~~qif~~~P~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~Hapy~iNla 76 (274)
T TIGR00587 3 LGAHVSA--A-GGLQAAYNRAAEIGA-TAFMFFLKSPRWWRRPMLEE--EVIDWFKAALETNKNLSQIVLVHAPYLINLA 76 (274)
T ss_pred eEEEEec--c-CCHHHHHHHHHHhCC-CEEEEEecCccccCCCCCCH--HHHHHHHHHHHHcCCCCcceeccCCeeeecC
Confidence 3456554 3 333556888888884 69999975321111111222 3333333345555554 77886532 111
Q ss_pred -CCh--hHHHHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 020186 127 -VDI--FDREKVFIDTILQPLIQRLPQLKVVMEHITT 160 (329)
Q Consensus 127 -~~~--~~~E~~av~~~~~~~la~~~~~~lhi~HvSt 160 (329)
.+. +..-...+.+.+ .+|+..|++..+.|..+
T Consensus 77 s~~~~~r~~sv~~~~~~i--~~A~~lga~~vv~H~G~ 111 (274)
T TIGR00587 77 SPDEEKEEKSLDVLDEEL--KRCELLGIMLYNFHPGS 111 (274)
T ss_pred CCCHHHHHHHHHHHHHHH--HHHHHcCCCEEEECCCC
Confidence 111 122234555666 68999999999999864
No 144
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=57.13 E-value=61 Score=29.93 Aligned_cols=88 Identities=13% Similarity=0.126 Sum_probs=37.5
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeE--EEEecCCHHHHHHHHcccC--Cce
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKV--VMEHITTMDAVKFVESCKE--GFV 175 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~l--hi~HvSt~~sl~~i~~ak~--~~v 175 (329)
+.+.+.+++.-+.|.--++=+........+...|...+.+... ..+ ..++|+ .+.+.|+.+++++++.|++ .+.
T Consensus 22 ~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~-~~~-~~~~~vi~gv~~~st~~~i~~a~~a~~~Gad~ 99 (289)
T PF00701_consen 22 DALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVV-EAA-AGRVPVIAGVGANSTEEAIELARHAQDAGADA 99 (289)
T ss_dssp HHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHH-HHH-TTSSEEEEEEESSSHHHHHHHHHHHHHTT-SE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHH-HHc-cCceEEEecCcchhHHHHHHHHHHHhhcCceE
Confidence 5566666666555544333222211111112344444444321 111 123442 3334455666666666654 232
Q ss_pred EEEecchhhhcchh
Q 020186 176 AATVTPQHLVLNRN 189 (329)
Q Consensus 176 t~Et~phhL~l~~~ 189 (329)
-.=+.|+|...+++
T Consensus 100 v~v~~P~~~~~s~~ 113 (289)
T PF00701_consen 100 VLVIPPYYFKPSQE 113 (289)
T ss_dssp EEEEESTSSSCCHH
T ss_pred EEEeccccccchhh
Confidence 22245666555544
No 145
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=56.19 E-value=1.9e+02 Score=27.69 Aligned_cols=17 Identities=18% Similarity=0.108 Sum_probs=10.2
Q ss_pred HHHHHHHHhcCceeEEEE
Q 020186 65 PDEIKLARKTGVVFAVKL 82 (329)
Q Consensus 65 ~~el~~l~~~G~v~~~K~ 82 (329)
......|.+.+ +..||+
T Consensus 113 ~~svd~l~~~~-~~ayKI 129 (347)
T COG2089 113 LTAVDLLESLN-PPAYKI 129 (347)
T ss_pred HHHHHHHHhcC-CCeEEe
Confidence 34455555556 468887
No 146
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=54.16 E-value=89 Score=29.12 Aligned_cols=87 Identities=9% Similarity=-0.020 Sum_probs=38.1
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEec---CCHHHHHHHHcccC--Cc
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHI---TTMDAVKFVESCKE--GF 174 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~Hv---St~~sl~~i~~ak~--~~ 174 (329)
+.+.+.++...+.|+--++=+........+...|...+.+... ..+ .-+.|+ |+|+ |+.+++++++.|++ .+
T Consensus 21 ~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~-~~~-~g~~pv-i~gv~~~~t~~ai~~a~~A~~~Gad 97 (294)
T TIGR02313 21 EALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAI-DQI-AGRIPF-APGTGALNHDETLELTKFAEEAGAD 97 (294)
T ss_pred HHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHH-HHh-CCCCcE-EEECCcchHHHHHHHHHHHHHcCCC
Confidence 5666666666655543322222111111123445544444321 111 112444 2333 45666666666654 33
Q ss_pred eEEEecchhhhcchh
Q 020186 175 VAATVTPQHLVLNRN 189 (329)
Q Consensus 175 vt~Et~phhL~l~~~ 189 (329)
.-.=+.|+|.-.+++
T Consensus 98 ~v~v~pP~y~~~~~~ 112 (294)
T TIGR02313 98 AAMVIVPYYNKPNQE 112 (294)
T ss_pred EEEEcCccCCCCCHH
Confidence 333445666555443
No 147
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=51.31 E-value=52 Score=31.34 Aligned_cols=83 Identities=18% Similarity=0.130 Sum_probs=55.0
Q ss_pred HHhcCCCeEEEEecCCH-HHH-----------HHHHcccCCceEEEecc-----hhhhcchhhhcCCCCCCceEEcCCCC
Q 020186 145 IQRLPQLKVVMEHITTM-DAV-----------KFVESCKEGFVAATVTP-----QHLVLNRNALFQGGLRPHNYCLPVLK 207 (329)
Q Consensus 145 la~~~~~~lhi~HvSt~-~sl-----------~~i~~ak~~~vt~Et~p-----hhL~l~~~~~~~~~~~~~~k~~PPLR 207 (329)
.++-.|++++..+-+.. +.. +++++ .++-+=.|| ||| +|.+.+.. ...+.+-+|---.
T Consensus 164 r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~---sDii~l~~Plt~~T~hL-in~~~l~~-mk~ga~lVNtaRG 238 (324)
T COG1052 164 RLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAE---SDIISLHCPLTPETRHL-INAEELAK-MKPGAILVNTARG 238 (324)
T ss_pred HHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHh---CCEEEEeCCCChHHhhh-cCHHHHHh-CCCCeEEEECCCc
Confidence 44578999988887752 111 22322 222222233 566 45566553 2345788898877
Q ss_pred ChhhHHHHHHHHHcCCCCeEEecCCC
Q 020186 208 REIHRQAVVSAVTSGSRKFFLGTDSA 233 (329)
Q Consensus 208 ~~~dr~aLw~al~~G~Id~~i~SDHa 233 (329)
+--|.++|.+||++|.|- --|.|=.
T Consensus 239 ~~VDe~ALi~AL~~g~i~-gaglDV~ 263 (324)
T COG1052 239 GLVDEQALIDALKSGKIA-GAGLDVF 263 (324)
T ss_pred cccCHHHHHHHHHhCCcc-eEEeeec
Confidence 888999999999999998 8999954
No 148
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=50.66 E-value=1.3e+02 Score=28.06 Aligned_cols=119 Identities=13% Similarity=0.024 Sum_probs=56.1
Q ss_pred HHHHHHHHHhhHcC-CcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeE--EEEecCCHHHHHHHHcccC--Cc
Q 020186 100 GKCVHVLEEMVEQN-MPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKV--VMEHITTMDAVKFVESCKE--GF 174 (329)
Q Consensus 100 ~~l~~~l~~~~~~~-~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~l--hi~HvSt~~sl~~i~~ak~--~~ 174 (329)
+.+.+.+++..+.| +--++=+........+...|...+.+... ..+. -..|+ ++.+.|+.+++++.+.|++ ..
T Consensus 21 ~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~-~~~~-~~~pvi~gv~~~~t~~~i~la~~a~~~Gad 98 (290)
T TIGR00683 21 KGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAK-DEAK-DQIALIAQVGSVNLKEAVELGKYATELGYD 98 (290)
T ss_pred HHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHH-HHhC-CCCcEEEecCCCCHHHHHHHHHHHHHhCCC
Confidence 66777777776666 33222222111111123455555544331 1111 12443 3334567788888887766 33
Q ss_pred eEEEecchhhhcchhhh--------cCCCCCCceEEcCCCCChhh-HHHHHHHHH
Q 020186 175 VAATVTPQHLVLNRNAL--------FQGGLRPHNYCLPVLKREIH-RQAVVSAVT 220 (329)
Q Consensus 175 vt~Et~phhL~l~~~~~--------~~~~~~~~~k~~PPLR~~~d-r~aLw~al~ 220 (329)
.-.=+.|+|.-.+++.+ +....-+.+..|-|-++..+ ...++..|.
T Consensus 99 ~v~v~~P~y~~~~~~~i~~yf~~v~~~~~~lpv~lYn~P~~tg~~l~~~~i~~L~ 153 (290)
T TIGR00683 99 CLSAVTPFYYKFSFPEIKHYYDTIIAETGGLNMIVYSIPFLTGVNMGIEQFGELY 153 (290)
T ss_pred EEEEeCCcCCCCCHHHHHHHHHHHHhhCCCCCEEEEeCccccccCcCHHHHHHHh
Confidence 22226677776664432 10001234555677665433 234555554
No 149
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=49.82 E-value=94 Score=29.24 Aligned_cols=12 Identities=17% Similarity=0.099 Sum_probs=5.4
Q ss_pred CHHHHHHHHccc
Q 020186 160 TMDAVKFVESCK 171 (329)
Q Consensus 160 t~~sl~~i~~ak 171 (329)
+.+++++++.|+
T Consensus 89 t~~ai~~a~~A~ 100 (309)
T cd00952 89 TRDTIARTRALL 100 (309)
T ss_pred HHHHHHHHHHHH
Confidence 444444444443
No 150
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=48.86 E-value=1.4e+02 Score=27.68 Aligned_cols=8 Identities=25% Similarity=0.559 Sum_probs=4.4
Q ss_pred CcEEEecC
Q 020186 114 MPLLVHGE 121 (329)
Q Consensus 114 ~~v~vHaE 121 (329)
.+|++|..
T Consensus 70 ~pvi~gv~ 77 (289)
T cd00951 70 VPVLAGAG 77 (289)
T ss_pred CCEEEecC
Confidence 55565554
No 151
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=47.70 E-value=1.4e+02 Score=27.69 Aligned_cols=15 Identities=0% Similarity=0.162 Sum_probs=7.7
Q ss_pred HHHHHHHHHhhHcCC
Q 020186 100 GKCVHVLEEMVEQNM 114 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~ 114 (329)
+.+.+..+++.+.|+
T Consensus 22 ~~l~~~i~~l~~~Gv 36 (292)
T PRK03170 22 AALRKLVDYLIANGT 36 (292)
T ss_pred HHHHHHHHHHHHcCC
Confidence 455555555555443
No 152
>PLN02417 dihydrodipicolinate synthase
Probab=46.54 E-value=1.4e+02 Score=27.60 Aligned_cols=28 Identities=18% Similarity=0.050 Sum_probs=12.8
Q ss_pred CHHHHHHHHcccC--CceEEEecchhhhcc
Q 020186 160 TMDAVKFVESCKE--GFVAATVTPQHLVLN 187 (329)
Q Consensus 160 t~~sl~~i~~ak~--~~vt~Et~phhL~l~ 187 (329)
+.+++++.+.|++ .+.-.=+.|+|...+
T Consensus 82 t~~~i~~a~~a~~~Gadav~~~~P~y~~~~ 111 (280)
T PLN02417 82 TREAIHATEQGFAVGMHAALHINPYYGKTS 111 (280)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCccCCCC
Confidence 4555555555544 222222445554444
No 153
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=43.68 E-value=1.5e+02 Score=27.18 Aligned_cols=15 Identities=13% Similarity=0.255 Sum_probs=7.6
Q ss_pred HHHHHHHHHhhHcCC
Q 020186 100 GKCVHVLEEMVEQNM 114 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~ 114 (329)
+.+.+.+++..+.|+
T Consensus 18 ~~~~~~i~~l~~~Gv 32 (281)
T cd00408 18 DALRRLVEFLIEAGV 32 (281)
T ss_pred HHHHHHHHHHHHcCC
Confidence 445555555555443
No 154
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=43.67 E-value=3e+02 Score=26.31 Aligned_cols=71 Identities=15% Similarity=0.197 Sum_probs=39.8
Q ss_pred HHHHHHHHhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHH
Q 020186 65 PDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPL 144 (329)
Q Consensus 65 ~~el~~l~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~ 144 (329)
.+.++.+.+.| +..+|+= | ..+.| ...++++++.|.|+++-..-.. ..|... .+ .
T Consensus 99 ~~svd~l~~~~-v~~~KIa-----S---~~~~n-----~pLL~~~A~~gkPvilStGmat------l~Ei~~---Av--~ 153 (329)
T TIGR03569 99 LESADFLEDLG-VPRFKIP-----S---GEITN-----APLLKKIARFGKPVILSTGMAT------LEEIEA---AV--G 153 (329)
T ss_pred HHHHHHHHhcC-CCEEEEC-----c---ccccC-----HHHHHHHHhcCCcEEEECCCCC------HHHHHH---HH--H
Confidence 45566666667 4577872 1 12445 3566677888999888555332 234332 22 2
Q ss_pred HHhcCCCe---EEEEecCC
Q 020186 145 IQRLPQLK---VVMEHITT 160 (329)
Q Consensus 145 la~~~~~~---lhi~HvSt 160 (329)
..+..|++ +-++|..+
T Consensus 154 ~i~~~G~~~~~i~llhC~s 172 (329)
T TIGR03569 154 VLRDAGTPDSNITLLHCTT 172 (329)
T ss_pred HHHHcCCCcCcEEEEEECC
Confidence 22344654 77888654
No 155
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=43.47 E-value=1.4e+02 Score=27.49 Aligned_cols=29 Identities=17% Similarity=0.087 Sum_probs=12.7
Q ss_pred CHHHHHHHHcccC--CceEEEecchhhhcch
Q 020186 160 TMDAVKFVESCKE--GFVAATVTPQHLVLNR 188 (329)
Q Consensus 160 t~~sl~~i~~ak~--~~vt~Et~phhL~l~~ 188 (329)
+.+++++.+.|++ ...-.=+.|+|..+++
T Consensus 79 ~~~~i~~a~~a~~~Gad~v~v~pP~y~~~~~ 109 (285)
T TIGR00674 79 TEEAISLTKFAEDVGADGFLVVTPYYNKPTQ 109 (285)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCcCCCCCH
Confidence 4455555555443 2222233455544443
No 156
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=41.95 E-value=1.9e+02 Score=26.70 Aligned_cols=30 Identities=10% Similarity=0.098 Sum_probs=15.2
Q ss_pred CCHHHHHHHHcccC--CceEEEecchhhhcch
Q 020186 159 TTMDAVKFVESCKE--GFVAATVTPQHLVLNR 188 (329)
Q Consensus 159 St~~sl~~i~~ak~--~~vt~Et~phhL~l~~ 188 (329)
|+.+++++.+.|++ ...-.=+.|+|+-.++
T Consensus 81 ~~~~ai~~a~~a~~~Gad~v~~~~P~y~~~~~ 112 (288)
T cd00954 81 NLKESQELAKHAEELGYDAISAITPFYYKFSF 112 (288)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCCCCCH
Confidence 35666666666554 3333334565554443
No 157
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=40.91 E-value=1.4e+02 Score=27.91 Aligned_cols=68 Identities=13% Similarity=0.007 Sum_probs=43.2
Q ss_pred HHHHHHHHHhhHcC-CcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecC-CHHHHHHHHcccCCceEE
Q 020186 100 GKCVHVLEEMVEQN-MPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESCKEGFVAA 177 (329)
Q Consensus 100 ~~l~~~l~~~~~~~-~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvS-t~~sl~~i~~ak~~~vt~ 177 (329)
..+..+|+++++.| .++.+||....- . ..+...+. .++ ..=-|-++++ .++-++++++ .++..
T Consensus 153 ~~f~~~~~~ar~~g~l~~t~HaGE~~~---~-----~~v~~~~~-~~~---~RIgHg~~~~~~p~~~~~l~~---~~i~i 217 (305)
T cd00443 153 RDFYSYYEYARRLGLLGLTLHCGETGN---R-----EELLQALL-LLP---DRIGHGIFLLKHPELIYLVKL---RNIPI 217 (305)
T ss_pred HHHHHHHHHHHHcCCcceEEeecCCCC---h-----HHHHHHHH-hcc---ceeeceEecCCCHHHHHHHHH---cCCEE
Confidence 56889999999999 999999985421 1 12333321 112 2213555554 3577777765 57899
Q ss_pred Eecch
Q 020186 178 TVTPQ 182 (329)
Q Consensus 178 Et~ph 182 (329)
|+||-
T Consensus 218 e~CP~ 222 (305)
T cd00443 218 EVCPT 222 (305)
T ss_pred EECcc
Confidence 99994
No 158
>PRK09356 imidazolonepropionase; Validated
Probab=40.82 E-value=3.4e+02 Score=26.10 Aligned_cols=69 Identities=13% Similarity=0.112 Sum_probs=41.0
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHcccCCceEEEe
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATV 179 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~sl~~i~~ak~~~vt~Et 179 (329)
+.+.++++.+++.|.++.+|+...... + .+.... . ..... -.|..++ +.+.++.+++ ..+.+.+
T Consensus 222 ~~l~~~~~~A~~~g~~v~~H~~~~~~~-~-------~~~~~~--~-~~~~~-~~H~~~~-~~~~~~~la~---~g~~~~~ 285 (406)
T PRK09356 222 EQSERVLEAAKALGLPVKIHAEQLSNL-G-------GAELAA--E-YGALS-ADHLEYL-DEAGIAAMAE---AGTVAVL 285 (406)
T ss_pred HHHHHHHHHHHHCCCCEEEEEecccCC-C-------HHHHHH--H-cCCcE-ehHhhcC-CHHHHHHHHH---hCCEEEE
Confidence 789999999999999999998532100 0 111111 1 11111 1255555 5667777765 3567788
Q ss_pred cchhh
Q 020186 180 TPQHL 184 (329)
Q Consensus 180 ~phhL 184 (329)
||...
T Consensus 286 ~P~~~ 290 (406)
T PRK09356 286 LPGAF 290 (406)
T ss_pred Cccch
Confidence 88653
No 159
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=39.87 E-value=2e+02 Score=26.67 Aligned_cols=29 Identities=21% Similarity=0.132 Sum_probs=14.4
Q ss_pred CHHHHHHHHcccC--CceEEEecchhhhcch
Q 020186 160 TMDAVKFVESCKE--GFVAATVTPQHLVLNR 188 (329)
Q Consensus 160 t~~sl~~i~~ak~--~~vt~Et~phhL~l~~ 188 (329)
+.+++++++.|++ ...-.=+.|+|.-.++
T Consensus 85 t~~ai~~a~~a~~~Gad~v~v~~P~y~~~~~ 115 (293)
T PRK04147 85 TAEAQELAKYATELGYDAISAVTPFYYPFSF 115 (293)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcCCCCCH
Confidence 5666666666554 3333333455554443
No 160
>PRK09875 putative hydrolase; Provisional
Probab=39.02 E-value=1e+02 Score=28.91 Aligned_cols=39 Identities=8% Similarity=-0.030 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCeEEEEecCCH-HHHHHHHccc
Q 020186 130 FDREKVFIDTILQPLIQRLPQLKVVMEHITTM-DAVKFVESCK 171 (329)
Q Consensus 130 ~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~-~sl~~i~~ak 171 (329)
...|...+...+ ..++.||+|++ +|.+-. .+++.++-++
T Consensus 134 t~~E~kvl~Aaa--~a~~~TG~pi~-~Ht~~~~~g~e~l~il~ 173 (292)
T PRK09875 134 TPLEEKVFIAAA--LAHNQTGRPIS-THTSFSTMGLEQLALLQ 173 (292)
T ss_pred CHHHHHHHHHHH--HHHHHHCCcEE-EcCCCccchHHHHHHHH
Confidence 345555555444 66889999984 576644 5666655544
No 161
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=38.71 E-value=1.2e+02 Score=27.02 Aligned_cols=73 Identities=19% Similarity=0.272 Sum_probs=37.5
Q ss_pred HHHHHHhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHH
Q 020186 67 EIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQ 146 (329)
Q Consensus 67 el~~l~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la 146 (329)
-+..|.+.|+ .|+|.|+-.+ .... +.+..+-+.+++.|..+ .+--. + ++. -+..++ .++
T Consensus 140 Aiaml~dmG~-~SiKffPm~G-------l~~l-eE~~avAkA~a~~g~~l--EPTGG-I--dl~-----N~~~I~--~i~ 198 (218)
T PF07071_consen 140 AIAMLKDMGG-SSIKFFPMGG-------LKHL-EELKAVAKACARNGFTL--EPTGG-I--DLD-----NFEEIV--KIC 198 (218)
T ss_dssp HHHHHHHTT---EEEE---TT-------TTTH-HHHHHHHHHHHHCT-EE--EEBSS-----TT-----THHHHH--HHH
T ss_pred HHHHHHHcCC-CeeeEeecCC-------cccH-HHHHHHHHHHHHcCcee--CCcCC-c--CHH-----HHHHHH--HHH
Confidence 3667777884 7999997432 2233 66777778889988876 33211 1 111 133344 566
Q ss_pred hcCCCeEEEEecCC
Q 020186 147 RLPQLKVVMEHITT 160 (329)
Q Consensus 147 ~~~~~~lhi~HvSt 160 (329)
...|++..|-||-|
T Consensus 199 l~aGv~~viPHiYs 212 (218)
T PF07071_consen 199 LDAGVEKVIPHIYS 212 (218)
T ss_dssp HHTT-S-B--EE-G
T ss_pred HHcCCCeeccchhh
Confidence 77899999999854
No 162
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=38.01 E-value=1.5e+02 Score=27.17 Aligned_cols=9 Identities=11% Similarity=0.357 Sum_probs=4.3
Q ss_pred CcEEEecCC
Q 020186 114 MPLLVHGEV 122 (329)
Q Consensus 114 ~~v~vHaEd 122 (329)
.+++++...
T Consensus 70 ~~vi~gv~~ 78 (284)
T cd00950 70 VPVIAGTGS 78 (284)
T ss_pred CcEEeccCC
Confidence 445555443
No 163
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=33.59 E-value=2.6e+02 Score=25.72 Aligned_cols=83 Identities=11% Similarity=0.125 Sum_probs=38.6
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHcccC--CceEE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKE--GFVAA 177 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~sl~~i~~ak~--~~vt~ 177 (329)
+.+.+.+++..+.|+--++=+........+...|...+.+... ..+. ++-+++.+.|+.+++++++.|++ ...-.
T Consensus 20 ~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~-~~~~--~vi~gvg~~~~~~ai~~a~~a~~~Gad~v~ 96 (279)
T cd00953 20 EKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYS-DITD--KVIFQVGSLNLEESIELARAAKSFGIYAIA 96 (279)
T ss_pred HHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHH-HHcC--CEEEEeCcCCHHHHHHHHHHHHHcCCCEEE
Confidence 6677777776666654333333221111123455555544331 1111 22223333346777777777665 33333
Q ss_pred Eecchhhh
Q 020186 178 TVTPQHLV 185 (329)
Q Consensus 178 Et~phhL~ 185 (329)
=+.|+|..
T Consensus 97 v~~P~y~~ 104 (279)
T cd00953 97 SLPPYYFP 104 (279)
T ss_pred EeCCcCCC
Confidence 34565543
No 164
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=33.28 E-value=92 Score=30.76 Aligned_cols=71 Identities=14% Similarity=0.027 Sum_probs=47.1
Q ss_pred HHHHHHcCCCCeEEecCCCCCCcCcccccCCcCCccchhHHHHH--HHHHHH--hcCCHHHHHHHHhhhhhhhcCCCC--
Q 020186 215 VVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSL--YAKVFE--EMGALDKLEAFTSFNGPDFYGLPR-- 288 (329)
Q Consensus 215 Lw~al~~G~Id~~i~SDHaPh~~~eK~~~~~~~Gi~~~e~~lpl--l~~~~~--~~~~l~~~v~~~s~nPAkifgl~~-- 288 (329)
+.+.|..|.+= -++||-+|++.-+ ... ..+|. .+..+. -++|+++++.+.+-|.||.+|+..
T Consensus 314 vr~lL~~~v~V-gLGtDv~~~s~l~-------a~r----~A~~~s~hL~~~~~~~~Ls~~e~L~lATi~GA~aLg~d~~~ 381 (439)
T KOG3968|consen 314 VRELLDIGVIV-GLGTDVSGCSILN-------ALR----QAMPMSMHLACVLDVMKLSMEEALYLATIGGAKALGRDDTH 381 (439)
T ss_pred HHHHHhcCceE-eecCCccccccHH-------HHH----HHHHHHHHHHhccCcccCCHHHHHHHHhccchhhccCCCcc
Confidence 34556678886 8999998743211 010 11221 222333 378999999999999999999943
Q ss_pred C------cccEEEEe
Q 020186 289 N------TSKIKLTK 297 (329)
Q Consensus 289 ~------dADlvi~~ 297 (329)
| .+|++++|
T Consensus 382 Gs~eVGK~fDai~id 396 (439)
T KOG3968|consen 382 GSLEVGKYFDAIIID 396 (439)
T ss_pred cceecccccceEEEe
Confidence 3 68999995
No 165
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=33.27 E-value=3.2e+02 Score=25.45 Aligned_cols=9 Identities=11% Similarity=0.464 Sum_probs=5.0
Q ss_pred CCcEEEecC
Q 020186 113 NMPLLVHGE 121 (329)
Q Consensus 113 ~~~v~vHaE 121 (329)
+.+|+++..
T Consensus 76 ~~pvi~gv~ 84 (303)
T PRK03620 76 RVPVIAGAG 84 (303)
T ss_pred CCcEEEecC
Confidence 356666654
No 166
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=32.57 E-value=2e+02 Score=25.92 Aligned_cols=73 Identities=21% Similarity=0.327 Sum_probs=45.8
Q ss_pred HHHHHHhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHH
Q 020186 67 EIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQ 146 (329)
Q Consensus 67 el~~l~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la 146 (329)
-+..|.+.|+ .|+|.|+-.+ .... +.++.+-+.+++.|..+ | +.-..+.. -+..++ .++
T Consensus 140 Aiaml~dmG~-~SiKffPM~G-------l~~l-eE~~avA~aca~~g~~l----E-PTGGIdl~-----Nf~~I~--~i~ 198 (236)
T TIGR03581 140 AIAMLKDMGG-SSVKFFPMGG-------LKHL-EEYAAVAKACAKHGFYL----E-PTGGIDLD-----NFEEIV--QIA 198 (236)
T ss_pred HHHHHHHcCC-CeeeEeecCC-------cccH-HHHHHHHHHHHHcCCcc----C-CCCCccHH-----hHHHHH--HHH
Confidence 3667777885 7999997432 2233 66777778888888863 3 11111211 233344 567
Q ss_pred hcCCCeEEEEecCC
Q 020186 147 RLPQLKVVMEHITT 160 (329)
Q Consensus 147 ~~~~~~lhi~HvSt 160 (329)
...|++-.|-||-+
T Consensus 199 ldaGv~kviPHIYs 212 (236)
T TIGR03581 199 LDAGVEKVIPHVYS 212 (236)
T ss_pred HHcCCCeeccccce
Confidence 77899999999855
No 167
>cd00019 AP2Ec AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar.
Probab=32.40 E-value=3.8e+02 Score=24.23 Aligned_cols=58 Identities=10% Similarity=0.056 Sum_probs=26.7
Q ss_pred HHHHHHHHHhhHcCCcE-EEecCCCCCCCChh---HHHHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 020186 100 GKCVHVLEEMVEQNMPL-LVHGEVTDPIVDIF---DREKVFIDTILQPLIQRLPQLKVVMEHITT 160 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v-~vHaEd~~~~~~~~---~~E~~av~~~~~~~la~~~~~~lhi~HvSt 160 (329)
+.+.++++.++++|+.. .+|+..... .... ..=...+.+++ .+|+..|+++.+-....
T Consensus 85 ~~~~~~i~~A~~lG~~~v~~~~g~~~~-~~~~~~~~~~~~~l~~l~--~~a~~~gi~l~lEn~~~ 146 (279)
T cd00019 85 ERLKDEIERCEELGIRLLVFHPGSYLG-QSKEEGLKRVIEALNELI--DKAETKGVVIALETMAG 146 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCC-CCHHHHHHHHHHHHHHHH--HhccCCCCEEEEeCCCC
Confidence 34566666666666553 445553211 0010 00112333333 45556666666655543
No 168
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=32.34 E-value=3.5e+02 Score=25.10 Aligned_cols=47 Identities=23% Similarity=0.248 Sum_probs=20.8
Q ss_pred HHHHhcCceeEEEEeeccccccCCCCccChHHHHHHHHHHhhH---cCCcEEEecC
Q 020186 69 KLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVE---QNMPLLVHGE 121 (329)
Q Consensus 69 ~~l~~~G~v~~~K~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~---~~~~v~vHaE 121 (329)
+.+.+.| +.+ +|..+++ .....+++ +.-.++++.+.+ -+.+|++|..
T Consensus 33 ~~l~~~G-v~g--i~v~Gst-GE~~~Lt~--eEr~~v~~~~~~~~~g~~pvi~gv~ 82 (296)
T TIGR03249 33 EWLLGYG-LEA--LFAAGGT-GEFFSLTP--AEYEQVVEIAVSTAKGKVPVYTGVG 82 (296)
T ss_pred HHHHhcC-CCE--EEECCCC-cCcccCCH--HHHHHHHHHHHHHhCCCCcEEEecC
Confidence 4444566 345 4554432 12223443 333334443322 2366777764
No 169
>PTZ00124 adenosine deaminase; Provisional
Probab=30.25 E-value=1.2e+02 Score=29.37 Aligned_cols=106 Identities=10% Similarity=0.123 Sum_probs=56.8
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecC-CHHHHHHHHcccCCceEEE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESCKEGFVAAT 178 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvS-t~~sl~~i~~ak~~~vt~E 178 (329)
....++|+++++.|..+.+||......... .....++.. .-++.-| |=+++. .++-++.+++ .+|..|
T Consensus 206 ~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~-~~v~~ai~~----l~~~RIG---HG~~~~~d~~l~~~l~~---~~I~lE 274 (362)
T PTZ00124 206 KPFKDIFDYVREAGVNLTVHAGEDVTLPNL-NTLYSAIQV----LKVKRIG---HGIRVAESQELIDMVKE---KDILLE 274 (362)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCcc-hhHHHHHHH----hCCCccc---cccccCCCHHHHHHHHH---cCCeEE
Confidence 456789999999999999999753110000 111112211 1122211 333442 5677777765 579999
Q ss_pred ecchhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCC
Q 020186 179 VTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAP 234 (329)
Q Consensus 179 t~phhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaP 234 (329)
+||-. .+. .+..|-++. --+-..+..|.- ++|+||.-.
T Consensus 275 vCPtS------N~~-------~~~v~~~~~----HPi~~l~~~Gv~-v~InTDDp~ 312 (362)
T PTZ00124 275 VCPIS------NVL-------LNNAKSMDT----HPIRKLYDAGVK-VSVNSDDPG 312 (362)
T ss_pred ECCcc------hhh-------hhcCCchhh----HHHHHHHHCCCc-EEEeCCCcc
Confidence 99932 221 111122211 124455666775 499999843
No 170
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=29.87 E-value=1.8e+02 Score=27.25 Aligned_cols=67 Identities=15% Similarity=0.127 Sum_probs=37.1
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCe--EEEEecC-CHHHHHHHHcccCCceE
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK--VVMEHIT-TMDAVKFVESCKEGFVA 176 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~--lhi~HvS-t~~sl~~i~~ak~~~vt 176 (329)
.....+++++++.|..+.+||....- . ..+...+ .+ .|+. -|-+++. .++-++.+++ .+|.
T Consensus 180 ~~~~~~~~~a~~~gl~~t~HaGE~~~----~----~~~~~ai--~~---l~~~RIgHG~~~~~~p~l~~~~~~---~~I~ 243 (331)
T PF00962_consen 180 LKFAPAFRKAREAGLKLTVHAGETGG----P----EHIRDAI--LL---LGADRIGHGVRLIKDPELLELLAE---RQIP 243 (331)
T ss_dssp GGHHHHHHHHHHTT-EEEEEESSSST----H----HHHHHHH--HT---ST-SEEEE-GGGGGSHHHHHHHHH---TT-E
T ss_pred HHHHHHHhhhcccceeecceecccCC----c----ccccchh--hh---ccceeecchhhhhhhhHHHHHHHH---hCCC
Confidence 34678899999999999999975421 1 1122222 11 2322 2333333 4555666664 5899
Q ss_pred EEecch
Q 020186 177 ATVTPQ 182 (329)
Q Consensus 177 ~Et~ph 182 (329)
+|+||-
T Consensus 244 iEvcpt 249 (331)
T PF00962_consen 244 IEVCPT 249 (331)
T ss_dssp EEE-HH
T ss_pred eeeCCC
Confidence 999995
No 171
>PRK06361 hypothetical protein; Provisional
Probab=28.83 E-value=1.6e+02 Score=25.70 Aligned_cols=21 Identities=14% Similarity=-0.171 Sum_probs=18.7
Q ss_pred cCCHHHHHHHHhhhhhhhcCC
Q 020186 266 MGALDKLEAFTSFNGPDFYGL 286 (329)
Q Consensus 266 ~~~l~~~v~~~s~nPAkifgl 286 (329)
.++.+++...+++||+++++.
T Consensus 190 gl~~~~v~~~~~~~~~~~~~~ 210 (212)
T PRK06361 190 GLTEKELEEALENNPKLLLKR 210 (212)
T ss_pred CCCHHHHHHHHHHhHHHHHHh
Confidence 669999999999999998763
No 172
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=27.75 E-value=89 Score=29.07 Aligned_cols=49 Identities=27% Similarity=0.354 Sum_probs=29.4
Q ss_pred HHHHHHhcCceeEEEE-eeccccccCCCCccChHHHHHHHHHHhhHcCCcEEEecCCC
Q 020186 67 EIKLARKTGVVFAVKL-YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVT 123 (329)
Q Consensus 67 el~~l~~~G~v~~~K~-f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~vHaEd~ 123 (329)
.+..+.+-| |.|+|+ ||.. ++... - ...+++++.+++..++|-+|-...
T Consensus 111 ~f~~~~~~G-v~GvKidF~~~---d~Q~~---v-~~y~~i~~~AA~~~LmvnfHg~~k 160 (273)
T PF10566_consen 111 AFKLYAKWG-VKGVKIDFMDR---DDQEM---V-NWYEDILEDAAEYKLMVNFHGATK 160 (273)
T ss_dssp HHHHHHHCT-EEEEEEE--SS---TSHHH---H-HHHHHHHHHHHHTT-EEEETTS--
T ss_pred HHHHHHHcC-CCEEeeCcCCC---CCHHH---H-HHHHHHHHHHHHcCcEEEecCCcC
Confidence 467777788 569998 5431 11111 1 345688889999999999997643
No 173
>COG1197 Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]
Probab=27.67 E-value=54 Score=36.40 Aligned_cols=39 Identities=10% Similarity=0.206 Sum_probs=29.4
Q ss_pred CCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCCCC
Q 020186 196 LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPH 235 (329)
Q Consensus 196 ~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHaPh 235 (329)
+.-...+---+|+...+....++|++|.||++||| |.=-
T Consensus 670 fPV~I~~LSRF~s~kE~~~il~~la~G~vDIvIGT-HrLL 708 (1139)
T COG1197 670 FPVRIEVLSRFRSAKEQKEILKGLAEGKVDIVIGT-HRLL 708 (1139)
T ss_pred CCeeEEEecccCCHHHHHHHHHHHhcCCccEEEec-hHhh
Confidence 44345556678999999999999999999966666 5433
No 174
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=27.21 E-value=2.3e+02 Score=22.48 Aligned_cols=53 Identities=19% Similarity=0.268 Sum_probs=30.9
Q ss_pred HHHHHHHhhHcCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHccc
Q 020186 102 CVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK 171 (329)
Q Consensus 102 l~~~l~~~~~~~~~v~vHaEd~~~~~~~~~~E~~av~~~~~~~la~~~~~~lhi~HvSt~~sl~~i~~ak 171 (329)
..+.++.+.+.|.+|.|||....- + + .++. .+ ++.... ..|-.++++.++..|
T Consensus 67 ~~~~i~~~~~~~~~VlVHC~~G~~----R-S--~~v~-~~--yl~~~~-------~~~~~~A~~~v~~~R 119 (138)
T smart00195 67 AVEFIEDAEKKGGKVLVHCQAGVS----R-S--ATLI-IA--YLMKYR-------NLSLNDAYDFVKDRR 119 (138)
T ss_pred HHHHHHHHhcCCCeEEEECCCCCc----h-H--HHHH-HH--HHHHHh-------CCCHHHHHHHHHHHC
Confidence 344555556678899999997631 0 0 0111 11 233322 357788999998765
No 175
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=27.07 E-value=3.9e+02 Score=22.60 Aligned_cols=46 Identities=15% Similarity=0.024 Sum_probs=30.8
Q ss_pred cchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCCC
Q 020186 186 LNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSA 233 (329)
Q Consensus 186 l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDHa 233 (329)
++.+.+..-. .....+|--=.+--|.++|.++|++|.|- ..+.|=.
T Consensus 109 i~~~~l~~mk-~ga~lvN~aRG~~vde~aL~~aL~~g~i~-ga~lDV~ 154 (178)
T PF02826_consen 109 INAEFLAKMK-PGAVLVNVARGELVDEDALLDALESGKIA-GAALDVF 154 (178)
T ss_dssp BSHHHHHTST-TTEEEEESSSGGGB-HHHHHHHHHTTSEE-EEEESS-
T ss_pred eeeeeeeccc-cceEEEeccchhhhhhhHHHHHHhhccCc-eEEEECC
Confidence 5666665422 23566775433355788999999999998 8999854
No 176
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=27.02 E-value=4.6e+02 Score=23.49 Aligned_cols=79 Identities=10% Similarity=0.093 Sum_probs=47.4
Q ss_pred HHHHHHHHHhhHcCCcE-EEecCCCCCCCCh---hHHHHHHHHHHHHHHHHhcCCCeEEEEecC---------CHHHHHH
Q 020186 100 GKCVHVLEEMVEQNMPL-LVHGEVTDPIVDI---FDREKVFIDTILQPLIQRLPQLKVVMEHIT---------TMDAVKF 166 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v-~vHaEd~~~~~~~---~~~E~~av~~~~~~~la~~~~~~lhi~HvS---------t~~sl~~ 166 (329)
+.+.+.++.++++|+.. .+|+-........ ...-...+.++. .+|+..|+++-+-.+. ..+.+++
T Consensus 90 ~~~~~~i~~a~~lGa~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~a~~~gv~l~iE~~~~~~~~~~~t~~~~~~l 167 (275)
T PRK09856 90 DMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELC--EYAENIGMDLILEPLTPYESNVVCNANDVLHA 167 (275)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHcCCEEEEecCCCCcccccCCHHHHHHH
Confidence 46778899999999875 5666432211111 112223566666 7888899998777542 3556666
Q ss_pred HHcccC--CceEEEec
Q 020186 167 VESCKE--GFVAATVT 180 (329)
Q Consensus 167 i~~ak~--~~vt~Et~ 180 (329)
++..-. ..+.++++
T Consensus 168 ~~~~~~~~v~~~~D~~ 183 (275)
T PRK09856 168 LALVPSPRLFSMVDIC 183 (275)
T ss_pred HHHcCCCcceeEEeec
Confidence 665432 44566664
No 177
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=26.20 E-value=2.9e+02 Score=26.49 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=16.5
Q ss_pred hhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHH
Q 020186 182 QHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVT 220 (329)
Q Consensus 182 hhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~ 220 (329)
-|++++.++ . |-+..+-++| ++=++|.++++
T Consensus 234 KHFtldk~~--~-GpD~~fSldP-----~efk~mv~~ir 264 (347)
T COG2089 234 KHFTLDKSR--E-GPDHAFSLDP-----DEFKEMVDAIR 264 (347)
T ss_pred eeeeecCCC--C-CCCcceecCH-----HHHHHHHHHHH
Confidence 456666554 2 3355677777 34444444443
No 178
>PRK07377 hypothetical protein; Provisional
Probab=25.17 E-value=58 Score=28.34 Aligned_cols=21 Identities=14% Similarity=-0.037 Sum_probs=18.8
Q ss_pred hhhHHHHHHHHHcCCCCeEEec
Q 020186 209 EIHRQAVVSAVTSGSRKFFLGT 230 (329)
Q Consensus 209 ~~dr~aLw~al~~G~Id~~i~S 230 (329)
-+|+++|-++|.+|+|| ++++
T Consensus 115 y~~~~~l~~aL~~~eVh-~~c~ 135 (184)
T PRK07377 115 YPDLQALEQALRDKEVH-AICL 135 (184)
T ss_pred cCCHHHHHHHHhcCCcc-EEec
Confidence 46899999999999999 8876
No 179
>PF10907 DUF2749: Protein of unknown function (DUF2749); InterPro: IPR024475 This bacterial family of proteins represent the TrbJ and TrbK genes of the Ti plasmid conjugative transfer operon [].
Probab=24.86 E-value=1.3e+02 Score=21.53 Aligned_cols=18 Identities=17% Similarity=0.104 Sum_probs=12.4
Q ss_pred chhcccCccEEEECCCCC
Q 020186 8 PICSVSHYGRAIVMPNLK 25 (329)
Q Consensus 8 ~~Aa~GGvTtvidmPnt~ 25 (329)
-+|++|..|.++.-|+..
T Consensus 13 vaa~a~~atwviVq~~~a 30 (66)
T PF10907_consen 13 VAAAAGAATWVIVQPRPA 30 (66)
T ss_pred HHhhhceeEEEEECCCCC
Confidence 455667777778889733
No 180
>KOG3020 consensus TatD-related DNase [Replication, recombination and repair]
Probab=23.71 E-value=6.2e+02 Score=23.84 Aligned_cols=22 Identities=18% Similarity=0.114 Sum_probs=19.7
Q ss_pred hcCCHHHHHHHHhhhhhhhcCC
Q 020186 265 EMGALDKLEAFTSFNGPDFYGL 286 (329)
Q Consensus 265 ~~~~l~~~v~~~s~nPAkifgl 286 (329)
+.++++++++.++.|--|+|++
T Consensus 275 k~~~~ee~~~~~~~Nt~rl~~~ 296 (296)
T KOG3020|consen 275 KDLDLEEVAEATYENTIRLFKL 296 (296)
T ss_pred hcCCHHHHHHHHHHHHHHHhcC
Confidence 4789999999999999999874
No 181
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=23.09 E-value=1.7e+02 Score=26.44 Aligned_cols=104 Identities=14% Similarity=0.179 Sum_probs=50.0
Q ss_pred cchhcccCccEEEECCC-CCCCCCcH-HHHH----HHHHHHHhhCCCCccEEEEEE--EEeCCCCCHHHHHHHHhcCcee
Q 020186 7 LPICSVSHYGRAIVMPN-LKPPITTT-AAAV----AYRESILKALPASSNFTPLMT--LYLTDTTSPDEIKLARKTGVVF 78 (329)
Q Consensus 7 ~~~Aa~GGvTtvidmPn-t~p~~~~~-~~l~----~~~~~~~~~~~~~vd~~~~~~--~~~~~~~~~~el~~l~~~G~v~ 78 (329)
+..|.--|||+++.-|. ..|..+++ +.+. +..+..++.+ +|.-++.| +.++ .+-+.++.+ |.+.
T Consensus 26 l~~A~~qGvt~iVaTsHh~~g~y~n~~~~v~~~~~~ln~~~~~~a---idl~v~pGQEIrIt----~~vl~~l~~-g~I~ 97 (254)
T COG4464 26 LREAVRQGVTKIVATSHHLHGRYENPIEKVKEKANQLNEILKKEA---IDLKVLPGQEIRIT----GDVLDDLDK-GIIL 97 (254)
T ss_pred HHHHHHcCceEEeecccccCCccCChHHHHHHHHHHHHHHHHhhc---CCceeccCceEEEc----hHHHHHHhc-Cccc
Confidence 56788899999999984 44544443 3333 3333333322 56554432 1111 233455543 4332
Q ss_pred EEE--EeeccccccCCCCccChHHHHHHHHHHhhHcC-CcEEEecCCC
Q 020186 79 AVK--LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQN-MPLLVHGEVT 123 (329)
Q Consensus 79 ~~K--~f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~~-~~v~vHaEd~ 123 (329)
+.- -|+---|+.+ .+. ....++|-.+...| .|+..|+|..
T Consensus 98 tindskYlLIEF~~~--~v~---~ya~~lf~elq~kGi~PIIAHPERn 140 (254)
T COG4464 98 TINDSKYLLIEFPMN--HVP---RYADQLFFELQSKGIIPIIAHPERN 140 (254)
T ss_pred cccccceEEEEccCC--cch---hhHHHHHHHHHHCCceeeeechhhH
Confidence 210 0110001110 111 23445555556667 5789999965
No 182
>TIGR00695 uxuA mannonate dehydratase. This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.
Probab=21.93 E-value=2e+02 Score=28.21 Aligned_cols=26 Identities=12% Similarity=0.029 Sum_probs=21.5
Q ss_pred HHHHHHHHHhhHcCCcEEEecCCCCC
Q 020186 100 GKCVHVLEEMVEQNMPLLVHGEVTDP 125 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~vHaEd~~~ 125 (329)
..|.+++-.+.+.|+.+.+|+-|+..
T Consensus 214 yFL~~ViPvAEe~GV~LAiHPDDPP~ 239 (394)
T TIGR00695 214 FFLQEILPVAEEYGVQMAIHPDDPPR 239 (394)
T ss_pred HHHHHHHHHHHHcCCEEEECCCCCCc
Confidence 34667788889999999999999853
No 183
>TIGR03234 OH-pyruv-isom hydroxypyruvate isomerase. This enzyme interconverts tartronate semi-aldehyde (TSA, aka 2-hydroxy 3-oxopropionate) and hydroxypyruvate. The E. coli enzyme has been characterized and found to be specific for TSA, contain no cofactors, and have a rather high Km for hydroxypyruvate of 12.5 mM. The gene is ofter found in association with glyoxalate carboligase (which produces TSA), but has been shown to have no effect on growth on glyoxalate when knocked out. This is consistent with the fact that the gene for tartronate semialdehyde reductase (glxR) is also associated and may have primary responsibility for the catabolism of TSA.
Probab=21.77 E-value=5.7e+02 Score=22.65 Aligned_cols=85 Identities=9% Similarity=-0.030 Sum_probs=48.0
Q ss_pred HHHHHHHHHhhHcCCcEE-EecCCCCCCCChhHHH---HHHHHHHHHHHHHhcCCCeEEEEe-----------cCCHHHH
Q 020186 100 GKCVHVLEEMVEQNMPLL-VHGEVTDPIVDIFDRE---KVFIDTILQPLIQRLPQLKVVMEH-----------ITTMDAV 164 (329)
Q Consensus 100 ~~l~~~l~~~~~~~~~v~-vHaEd~~~~~~~~~~E---~~av~~~~~~~la~~~~~~lhi~H-----------vSt~~sl 164 (329)
+.+.++++.++++|+..+ +++.-........... ...+++++ .+|+..|+++.+-- .|..+++
T Consensus 84 ~~~~~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~~~~~~l~~l~--~~A~~~gi~l~lE~~~~~~~~~~~l~t~~~~~ 161 (254)
T TIGR03234 84 EGVALAIAYARALGCPQVNCLAGKRPAGVSPEEARATLVENLRYAA--DALDRIGLTLLIEPINSFDMPGFFLTTTEQAL 161 (254)
T ss_pred HHHHHHHHHHHHhCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHH--HHHHhcCCEEEEEECCcccCCCChhcCHHHHH
Confidence 456788899999998753 4443111000111111 13455555 68899999988863 2456778
Q ss_pred HHHHcccCCceEEEecchhhhc
Q 020186 165 KFVESCKEGFVAATVTPQHLVL 186 (329)
Q Consensus 165 ~~i~~ak~~~vt~Et~phhL~l 186 (329)
+++++....++-...-++|+..
T Consensus 162 ~li~~v~~~~~~i~~D~~h~~~ 183 (254)
T TIGR03234 162 AVIDDVGRENLKLQYDLYHMQR 183 (254)
T ss_pred HHHHHhCCCCEeEeeehhhhhh
Confidence 8887654323333344455553
No 184
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=21.38 E-value=3.7e+02 Score=23.90 Aligned_cols=60 Identities=10% Similarity=-0.050 Sum_probs=36.8
Q ss_pred HHHHHHHHcCCCCeEEecC-CCCCCcCcccccCCcCCccchhHHHHHHHHHHHh-cCCHHHHHHHHhhhhhhhcCCCC
Q 020186 213 QAVVSAVTSGSRKFFLGTD-SAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPR 288 (329)
Q Consensus 213 ~aLw~al~~G~Id~~i~SD-HaPh~~~eK~~~~~~~Gi~~~e~~lpll~~~~~~-~~~l~~~v~~~s~nPAkifgl~~ 288 (329)
..+++..++=-+-++|+|| |.|... -+.+....+ +.. .++-+++.+.++.+|.+++..-+
T Consensus 157 ~~~~~~~~~~g~piiisSdAh~~~~l------------~~~~~~~~l----~~~~Gl~~~~~~~~~~~~~~~i~~~~~ 218 (237)
T PRK00912 157 RDNLALARKYDFPLVLTSGAMSCYDL------------RSPREMIAL----AELFGMEEDEALKALSYYPESIIKKNR 218 (237)
T ss_pred HHHHHHHHhcCCCEEEeCCCCccccc------------CCHHHHHHH----HHHcCCCHHHHHHHHHHhHHHHHHhhc
Confidence 3466655542233589999 655532 122222222 222 56889999999999999987643
No 185
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=20.76 E-value=3.2e+02 Score=24.56 Aligned_cols=85 Identities=11% Similarity=0.075 Sum_probs=47.9
Q ss_pred cchhcccCccEEEECCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCCHHHHHHHHhcCceeEEEEeecc
Q 020186 7 LPICSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAG 86 (329)
Q Consensus 7 ~~~Aa~GGvTtvidmPnt~p~~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~K~f~~~ 86 (329)
+-+...||++ +++.+.+.|. ..+.++...+...+..+ |..+ +. +.=.+.++.....+.|+ .| .+
T Consensus 33 ~~al~~gGi~-~iEiT~~tp~--a~~~i~~l~~~~~~~~p---~~~v--Ga--GTVl~~e~a~~a~~aGA--~F--iV-- 96 (222)
T PRK07114 33 IKACYDGGAR-VFEFTNRGDF--AHEVFAELVKYAAKELP---GMIL--GV--GSIVDAATAALYIQLGA--NF--IV-- 96 (222)
T ss_pred HHHHHHCCCC-EEEEeCCCCc--HHHHHHHHHHHHHhhCC---CeEE--ee--EeCcCHHHHHHHHHcCC--CE--EE--
Confidence 4567889997 7888766654 24455544444333222 3322 22 21224678888888885 33 22
Q ss_pred ccccCCCCccChHHHHHHHHHHhhHcCCcEEE
Q 020186 87 ATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLV 118 (329)
Q Consensus 87 ~~~~~~~~~~d~~~~l~~~l~~~~~~~~~v~v 118 (329)
|. ..| .++++++++.|++++-
T Consensus 97 --sP----~~~-----~~v~~~~~~~~i~~iP 117 (222)
T PRK07114 97 --TP----LFN-----PDIAKVCNRRKVPYSP 117 (222)
T ss_pred --CC----CCC-----HHHHHHHHHcCCCEeC
Confidence 11 113 3577788888888764
No 186
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=20.68 E-value=3.7e+02 Score=25.45 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=33.5
Q ss_pred hhhhcchhhhcCCCCCCceEEcCCCCChhhHHHHHHHHHcCCCCeEEecCC
Q 020186 182 QHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDS 232 (329)
Q Consensus 182 hhL~l~~~~~~~~~~~~~~k~~PPLR~~~dr~aLw~al~~G~Id~~i~SDH 232 (329)
+||+ +.+.+..- ....+.+|--=.+-=|.++|.++|.+|.|- -.+.|=
T Consensus 215 ~~li-~~~~l~~m-k~ga~lIN~aRG~vVde~AL~~AL~~g~i~-gAaLDV 262 (323)
T PRK15409 215 HHLF-GAEQFAKM-KSSAIFINAGRGPVVDENALIAALQKGEIH-AAGLDV 262 (323)
T ss_pred hhcc-CHHHHhcC-CCCeEEEECCCccccCHHHHHHHHHcCCee-EEEeec
Confidence 3443 66666532 234566776555566889999999999998 888883
Done!