BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020188
(329 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3VIS|A Chain A, Crystal Structure Of Cutinase Est119 From Thermobifida
Alba Ahk119
pdb|3VIS|B Chain B, Crystal Structure Of Cutinase Est119 From Thermobifida
Alba Ahk119
Length = 306
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 28 SGPYSPKLKTVNKPWFNSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLAS 87
SGP+S + ++ + F I YP E TY I G + +S + L + +AS
Sbjct: 64 SGPFSVSEERASRFGADGFGGG--TIYYPRENNTYGAIAISPGYTGTQSSIAWLGERIAS 121
Query: 88 HGYIVVAPQLYDFL-PPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRG 146
HG++V+A L P +AA L+++ T S + ++A + +A+MGHS G
Sbjct: 122 HGFVVIAIDTNTTLDQPDSRARQLNAA--LDYMLTDASSAVRNRIDA--SRLAVMGHSMG 177
Query: 147 GLIAFGLA 154
G LA
Sbjct: 178 GGGTLRLA 185
>pdb|2FX5|A Chain A, Pseudomonas Mendocina Lipase
Length = 258
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 64 VILFFHGTALSNTSYSNLLDHLASHGYIVVAPQ 96
VIL+ +GT ++Y+ LL H ASHG++V A +
Sbjct: 51 VILWGNGTGAGPSTYAGLLSHWASHGFVVAAAE 83
>pdb|3CXU|A Chain A, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
pdb|3CXU|B Chain B, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
Length = 328
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 58 EKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLN 117
E G ILF HG S+ + + +LA GY VAP L + G +ND +
Sbjct: 27 ELGEGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTG-APLNDPSKFSI 85
Query: 118 WLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLAL 155
G L E + N V ++ H G LIA+ L L
Sbjct: 86 LHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCL 123
>pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
pdb|2CJP|B Chain B, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
Length = 328
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 58 EKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLN 117
E G ILF HG S+ + + +LA GY VAP L + G +ND +
Sbjct: 27 ELGEGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTG-APLNDPSKFSI 85
Query: 118 WLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLAL 155
G L E + N V ++ H G LIA+ L L
Sbjct: 86 LHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCL 123
>pdb|2ZSH|A Chain A, Structural Basis Of Gibberellin(Ga3)-Induced Della
Recognition By The Gibberellin Receptor
pdb|2ZSI|A Chain A, Structural Basis Of Gibberellin(Ga4)-Induced Della
Recognition By The Gibberellin Receptor
Length = 351
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 47 PPKPLNIVYPEEKGTYEVILFFHGTALSNTS-----YSNLLDHLASHGYIVVAPQLYDFL 101
PP L++ P + VILFFHG + +++S Y L L VV Y
Sbjct: 98 PPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRA 157
Query: 102 PPKGN-GEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLAL 155
P +D LNW+++ +S L ++ + ++ L G S GG IA +AL
Sbjct: 158 PENPYPCAYDDGWIALNWVNS--RSWLKSKKDSKV-HIFLAGDSSGGNIAHNVAL 209
>pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|B Chain B, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|C Chain C, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|D Chain D, Thioesterase Domain From Curacin Biosynthetic Pathway
Length = 286
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 64 VILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGL 123
V+L HG ++ + LA+ GY VVAP L+ G+G + V ++ S
Sbjct: 28 VVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLF------GHGRSSHLEMVTSYSSLTF 81
Query: 124 QSELPENVEANLNY-VALMGHSRGGLIAFGLA 154
+++ ++ + + L+GHS G ++A +A
Sbjct: 82 LAQIDRVIQELPDQPLLLVGHSMGAMLATAIA 113
>pdb|3U1T|A Chain A, Haloalkane Dehalogenase, Dmma, Of Marine Microbial
Origin
pdb|3U1T|B Chain B, Haloalkane Dehalogenase, Dmma, Of Marine Microbial
Origin
Length = 309
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 52 NIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQL 97
I Y +E G+ + +LF HG S+ + N++ ++ + GY VAP L
Sbjct: 20 TIAYVDE-GSGQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDL 64
>pdb|3D59|A Chain A, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase
pdb|3D59|B Chain B, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase
pdb|3D5E|A Chain A, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Paraoxon
pdb|3D5E|B Chain B, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Paraoxon
pdb|3F97|A Chain A, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Soman
pdb|3F97|B Chain B, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Soman
pdb|3F98|A Chain A, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Tabun
pdb|3F98|B Chain B, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Tabun
pdb|3F98|C Chain C, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Tabun
pdb|3F9C|A Chain A, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By
Diisopropylfluorophosphate
pdb|3F9C|B Chain B, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By
Diisopropylfluorophosphate
Length = 383
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 56 PEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYD 99
P EK Y +++F HG T YS + LASHG+IV A + D
Sbjct: 94 PGEK--YPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRD 135
>pdb|3F96|A Chain A, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Sarin
pdb|3F96|B Chain B, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Sarin
Length = 383
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 56 PEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYD 99
P EK Y +++F HG T YS + LASHG+IV A + D
Sbjct: 94 PGEK--YPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRD 135
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 44 NSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDF--- 100
++F K +Y ++ G+ + +LF HG L + +++L+S GY +A F
Sbjct: 1 STFVAKDGTQIYFKDWGSGKPVLFSHGWILDADMWEYQMEYLSSRGYRTIAFDRRGFGRS 60
Query: 101 -LPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGG 147
P GN A ++ ++L E++ +L V L+G S GG
Sbjct: 61 DQPWTGNDYDTFADDI---------AQLIEHL--DLKEVTLVGFSMGG 97
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 44 NSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDF--- 100
++F K +Y ++ G+ + +LF HG L + +++L+S GY +A F
Sbjct: 1 STFVAKDGTQIYFKDWGSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRS 60
Query: 101 -LPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGG 147
P GN A ++ ++L E++ +L V L+G S GG
Sbjct: 61 DQPWTGNDYDTFADDI---------AQLIEHL--DLKEVTLVGFSMGG 97
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 44 NSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDF--- 100
++F K +Y ++ G+ + +LF HG L + +++L+S GY +A F
Sbjct: 1 STFVAKDGTQIYFKDWGSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRS 60
Query: 101 -LPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGG 147
P GN A ++ ++L E++ +L V L+G S GG
Sbjct: 61 DQPWTGNDYDTFADDI---------AQLIEHL--DLKEVTLVGFSMGG 97
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 49 KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGE 108
KP ++ E G+ + HG S S+ + LA GY V+A + KG GE
Sbjct: 26 KPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDM------KGYGE 79
Query: 109 VNDAANVLNWLSTGLQSELPENVEA-NLNYVALMGHSRGGLIAFGLALGY 157
+ + + L E+ ++ L+ +GH GG++ + +AL Y
Sbjct: 80 SSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFY 129
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 44 NSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVA 94
+F + +Y ++ G+ + I+F HG L+ S+ + + LA+ GY V+A
Sbjct: 1 TTFTTRDGTQIYYKDWGSGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIA 51
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
Length = 344
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 49 KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGE 108
KP ++ E G+ + HG S S+ + LA GY V+A + KG GE
Sbjct: 41 KPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDM------KGYGE 94
Query: 109 VNDAANVLNWLSTGLQSELPENVEA-NLNYVALMGHSRGGLIAFGLALGY 157
+ + + L E+ ++ L+ +GH GG++ + +AL Y
Sbjct: 95 SSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFY 144
>pdb|1NYE|A Chain A, Crystal Structure Of Osmc From E. Coli
pdb|1NYE|B Chain B, Crystal Structure Of Osmc From E. Coli
pdb|1NYE|C Chain C, Crystal Structure Of Osmc From E. Coli
pdb|1NYE|D Chain D, Crystal Structure Of Osmc From E. Coli
pdb|1NYE|E Chain E, Crystal Structure Of Osmc From E. Coli
pdb|1NYE|F Chain F, Crystal Structure Of Osmc From E. Coli
Length = 162
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 104 KGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPV 163
+G G V+ + VLN G + N + H+ +A L LG A P
Sbjct: 36 RGKGTVSTESGVLNQQPYGFNTRFEGEKGTNPEELIGAAHAACFSMALSLMLGEAGFTPT 95
Query: 164 SIKISALVGIDPV-AGLA----SVHSELEPPILSHDSFE 197
SI +A V +D V AG A ++ SE+ P + +F+
Sbjct: 96 SIDTTADVSLDKVDAGFAITKIALKSEVAVPGIDASTFD 134
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 44 NSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDF--- 100
++F K +Y ++ G+ + +LF HG L + +++L+S GY +A F
Sbjct: 1 STFVAKDGTQIYFKDWGSGKPVLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRS 60
Query: 101 -LPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGG 147
P GN A ++ ++L E++ +L V L+G S GG
Sbjct: 61 DQPWTGNDYDTFADDI---------AQLIEHL--DLKEVTLVGFSMGG 97
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 44 NSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDF--- 100
++F K +Y ++ G+ + +LF HG L + +++L+S GY +A F
Sbjct: 1 STFVAKDGTQIYFKDWGSGKPVLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRS 60
Query: 101 -LPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGG 147
P GN A ++ ++L E++ +L V L+G S GG
Sbjct: 61 DQPWTGNDYDTFADDI---------AQLIEHL--DLKEVTLVGFSMGG 97
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 49 KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGE 108
KP ++ E G+ + HG S S+ + LA GY V+A + KG GE
Sbjct: 245 KPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDM------KGYGE 298
Query: 109 VNDAANVLNWLSTGLQSELPENVEA-NLNYVALMGHSRGGLIAFGLALGY 157
+ + + L E+ ++ L+ +GH GG++ + +AL Y
Sbjct: 299 SSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFY 348
>pdb|1HLG|A Chain A, Crystal Structure Of Human Gastric Lipase
pdb|1HLG|B Chain B, Crystal Structure Of Human Gastric Lipase
Length = 371
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 132 EANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHS 184
+ L+YV GHS+G I F + ++TNP ++ +I + PVA + S
Sbjct: 136 QKQLHYV---GHSQGTTIGF---IAFSTNPSLAKRIKTFYALAPVATVKYTKS 182
>pdb|1QWI|A Chain A, Crystal Structure Of E. Coli Osmc
pdb|1QWI|B Chain B, Crystal Structure Of E. Coli Osmc
pdb|1QWI|C Chain C, Crystal Structure Of E. Coli Osmc
pdb|1QWI|D Chain D, Crystal Structure Of E. Coli Osmc
Length = 143
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 104 KGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPV 163
+G G V+ + VLN G + N + H+ A L LG A P
Sbjct: 17 RGKGTVSTESGVLNQQPYGFNTRFEGEKGTNPEELIGAAHAACFSXALSLXLGEAGFTPT 76
Query: 164 SIKISALVGIDPV-AGLA----SVHSELEPPILSHDSFE 197
SI +A V +D V AG A ++ SE+ P + +F+
Sbjct: 77 SIDTTADVSLDKVDAGFAITKIALKSEVAVPGIDASTFD 115
>pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053)
From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution
Length = 315
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 49 KPLNIVYPE---EKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKG 105
+PL+ Y + +K IL HG ++ +D LA GY V+A F
Sbjct: 30 QPLSXAYLDVAPKKANGRTILLXHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSK 89
Query: 106 NGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSI 165
+ L + L L + +++GHS GG +A AL Y
Sbjct: 90 PAHYQYSFQQLAANTHALLERL------GVARASVIGHSXGGXLATRYALLYPR------ 137
Query: 166 KISALVGIDPVA 177
++ LV ++P+
Sbjct: 138 QVERLVLVNPIG 149
>pdb|3F67|A Chain A, Crystal Structure Of Putative Dienelactone Hydrolase From
Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578
Length = 241
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 20/105 (19%)
Query: 44 NSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPP 103
N+ P P+ IV E G +E I +L LA GY+ +AP+LY
Sbjct: 27 NADGPLPIVIVVQEIFGVHEHI-------------RDLCRRLAQEGYLAIAPELY----- 68
Query: 104 KGNGEVNDAANVLNWLSTGLQSELPE-NVEANLNYVALMGHSRGG 147
G+ N+ ++ L L S++P+ V A+L++VA GG
Sbjct: 69 FRQGDPNEYHDIPT-LFKELVSKVPDAQVLADLDHVASWAARHGG 112
>pdb|1K8Q|A Chain A, Crystal Structure Of Dog Gastric Lipase In Complex With A
Phosphonate Inhibitor
pdb|1K8Q|B Chain B, Crystal Structure Of Dog Gastric Lipase In Complex With A
Phosphonate Inhibitor
Length = 377
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 127 LPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSEL 186
L + + L+YV GHS+G I F + ++TNP ++ +I + PVA + + +
Sbjct: 139 LKKTGQDKLHYV---GHSQGTTIGF---IAFSTNPKLAKRIKTFYALAPVATVKYTETLI 192
Query: 187 EPPIL 191
+L
Sbjct: 193 NKLML 197
>pdb|1HKH|A Chain A, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HKH|B Chain B, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HL7|A Chain A, Gamma Lactamase From An Aureobacterium Species In Complex
With 3a,4,7,7a-Tetrahydro-Benzo [1,3] Dioxol-2-One
pdb|1HL7|B Chain B, Gamma Lactamase From An Aureobacterium Species In Complex
With 3a,4,7,7a-Tetrahydro-Benzo [1,3] Dioxol-2-One
Length = 279
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 15/110 (13%)
Query: 54 VYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAA 113
+Y E++G+ + ++ HG L S+ L + GY V+ YD G+ +VN
Sbjct: 15 LYYEDQGSGQPVVLIHGYPLDGHSWERQTRELLAQGYRVIT---YDRRGFGGSSKVNTGY 71
Query: 114 NVLNW---LSTGLQS-ELPENVEANLN--------YVALMGHSRGGLIAF 151
+ + L T L++ +L + V + YVA GH R +AF
Sbjct: 72 DYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAF 121
>pdb|3PF8|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
pdb|3PF8|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
Length = 270
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 31/108 (28%)
Query: 62 YEVILFFHG-TALSNTSYSNLLDHLA-SHGYIVVAPQLYDFLPPKGNG------------ 107
Y++ + FHG TA NTS LL +A S +A +DF G+G
Sbjct: 46 YDMAIIFHGFTANRNTS---LLREIANSLRDENIASVRFDF---NGHGDSDGKFENMTVL 99
Query: 108 -EVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLA 154
E+ DA +LN++ T + ++ + L+GHS+GG++A LA
Sbjct: 100 NEIEDANAILNYVKT----------DPHVRNIYLVGHSQGGVVASMLA 137
>pdb|3V48|A Chain A, Crystal Structure Of The Putative AlphaBETA HYDROLASE RUTD
FROM E.Coli
pdb|3V48|B Chain B, Crystal Structure Of The Putative AlphaBETA HYDROLASE RUTD
FROM E.Coli
Length = 268
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 131 VEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGID 174
V A + + A++GH+ G L+ LAL Y + V I ++ + I+
Sbjct: 77 VAAGIEHYAVVGHALGALVGXQLALDYPASVTVLISVNGWLRIN 120
>pdb|3QYJ|A Chain A, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120.
pdb|3QYJ|B Chain B, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120
Length = 291
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 65 ILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQ 124
+L HG ++ + + LA+ + VVA L +G G+ + A+V + ++ +
Sbjct: 28 LLLLHGYPQTHVMWHKIAPLLAN-NFTVVATDL------RGYGDSSRPASVPHHINYSKR 80
Query: 125 SELPENVE--ANLNY--VALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPV 176
+ VE + L Y ++GH RG +A LAL + P +K AL+ I P
Sbjct: 81 VMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDH----PHRVKKLALLDIAPT 132
>pdb|3E0X|A Chain A, The Crystal Structure Of A Lipase-Esterase Related Protein
From Clostridium Acetobutylicum Atcc 824
pdb|3E0X|B Chain B, The Crystal Structure Of A Lipase-Esterase Related Protein
From Clostridium Acetobutylicum Atcc 824
Length = 245
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 24/114 (21%)
Query: 51 LNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVN 110
L+ V+ K + +LF HG+ + + L +L + I L KG+GE
Sbjct: 5 LHYVHVGNKKSPNTLLFVHGSGCNLKIFGELEKYLEDYNCI--------LLDLKGHGESK 56
Query: 111 DAA---------NVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLAL 155
NV N+++ ++ +N+ L+G+S GG I G+AL
Sbjct: 57 GQCPSTVYGYIDNVANFITNSEVTKHQKNI-------TLIGYSXGGAIVLGVAL 103
>pdb|2XMZ|A Chain A, Structure Of Menh From S. Aureus
Length = 269
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 61 TYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVN-DAANVLNWL 119
T +V++F HG + +Y N ++ + +++ LP G + + D +++
Sbjct: 15 TNQVLVFLHGFLSDSRTYHNHIEKFTDNYHVITID-----LPGHGEDQSSMDETWNFDYI 69
Query: 120 STGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGL 179
+T L L + + + + L G+S GG + AL YA N + I L P G+
Sbjct: 70 TTLLDRILDKYKDKS---ITLFGYSMGGRV----ALYYAINGHIPISNLILESTSP--GI 120
Query: 180 ASVHSELEPPIL 191
++LE ++
Sbjct: 121 KEEANQLERRLV 132
>pdb|4AIP|A Chain A, The Frpb Iron Transporter From Neisseria Meningitidis
(f3-3 Variant)
pdb|4AIP|B Chain B, The Frpb Iron Transporter From Neisseria Meningitidis
(f3-3 Variant)
pdb|4AIP|C Chain C, The Frpb Iron Transporter From Neisseria Meningitidis
(f3-3 Variant)
Length = 742
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 7/52 (13%)
Query: 86 ASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNY 137
ASH Y +P+LYD L G + A+ G ++E N E NY
Sbjct: 499 ASHNYASRSPRLYDALQTHGKRGIISIAD-------GTKAERARNTEIGFNY 543
>pdb|3QM1|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate, Form Ii
Length = 265
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 31/108 (28%)
Query: 62 YEVILFFHG-TALSNTSYSNLLDHLA-SHGYIVVAPQLYDFLPPKGNG------------ 107
Y++ + FHG TA NTS LL +A S +A +DF G+G
Sbjct: 46 YDMAIIFHGFTANRNTS---LLREIANSLRDENIASVRFDF---NGHGDSDGKFENMTVL 99
Query: 108 -EVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLA 154
E+ DA +LN++ T + ++ + L+GH++GG++A LA
Sbjct: 100 NEIEDANAILNYVKT----------DPHVRNIYLVGHAQGGVVASMLA 137
>pdb|1G5F|A Chain A, Structure Of Linb Complexed With 1,2-Dichloroethane
pdb|1G4H|A Chain A, Linb Complexed With Butan-1-Ol
pdb|1G42|A Chain A, Structure Of 1,3,4,6-Tetrachloro-1,4-Cyclohexadiene
Hydrolase (Linb) From Sphingomonas Paucimobilis
Complexed With 1,2-Dichloropropane
Length = 296
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 58 EKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIV 92
++GT + ILF HG S+ + N++ H A G ++
Sbjct: 25 DEGTGDPILFQHGNPTSSYLWRNIMPHCAGLGRLI 59
>pdb|1MJ5|A Chain A, Linb (Haloalkane Dehalogenase) From Sphingomonas
Paucimobilis Ut26 At Atomic Resolution
Length = 302
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 58 EKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIV 92
++GT + ILF HG S+ + N++ H A G ++
Sbjct: 25 DEGTGDPILFQHGNPTSSYLWRNIMPHCAGLGRLI 59
>pdb|1CV2|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis Ut26 At 1.6 A Resolution
pdb|1D07|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis Ut26 With 1,3-Propanediol, A
Product Of Debromidation Of Dibrompropane, At 2.0a
Resolution
pdb|2BFN|A Chain A, The Crystal Structure Of The Complex Of The Haloalkane
Dehalogenase Linb With The Product Of Dehalogenation
Reaction 1,2-Dichloropropane
Length = 296
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 58 EKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIV 92
++GT + ILF HG S+ + N++ H A G ++
Sbjct: 25 DEGTGDPILFQHGNPTSSYLWRNIMPHCAGLGRLI 59
>pdb|1IZ7|A Chain A, Re-Refinement Of The Structure Of Hydrolytic Haloalkane
Dehalogenase Linb From Sphingomonas Paucimobilis Ut26
At 1.6 A Resolution
pdb|1IZ8|A Chain A, Re-Refinement Of The Structure Of Hydrolytic Haloalkane
Dehalogenase Linb From Sphingomonas Paucimobilis Ut26
With 1,3-Propanediol, A Product Of Debromidation Of
Dibrompropane, At 2.0a Resolution
pdb|1K5P|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis Ut26 At 1.8a Resolution
pdb|1K63|A Chain A, Complex Of Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis With Ut26
2-Bromo-2-Propene-1-Ol At 1.8a Resolution
pdb|1K6E|A Chain A, Complex Of Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis Ut26 With 1,2-Propanediol
(Product Of Dehalogenation Of 1,2-Dibromopropane) At
1.85a
Length = 295
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 58 EKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIV 92
++GT + ILF HG S+ + N++ H A G ++
Sbjct: 24 DEGTGDPILFQHGNPTSSYLWRNIMPHCAGLGRLI 58
>pdb|3PF9|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant
pdb|3PFB|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFB|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFC|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Ferulic
Acid
pdb|3S2Z|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
pdb|3S2Z|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
Length = 270
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 31/108 (28%)
Query: 62 YEVILFFHG-TALSNTSYSNLLDHLA-SHGYIVVAPQLYDFLPPKGNG------------ 107
Y++ + FHG TA NTS LL +A S +A +DF G+G
Sbjct: 46 YDMAIIFHGFTANRNTS---LLREIANSLRDENIASVRFDF---NGHGDSDGKFENMTVL 99
Query: 108 -EVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLA 154
E+ DA +LN++ T + ++ + L+GH++GG++A LA
Sbjct: 100 NEIEDANAILNYVKT----------DPHVRNIYLVGHAQGGVVASMLA 137
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,439,278
Number of Sequences: 62578
Number of extensions: 448313
Number of successful extensions: 1118
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1089
Number of HSP's gapped (non-prelim): 47
length of query: 329
length of database: 14,973,337
effective HSP length: 99
effective length of query: 230
effective length of database: 8,778,115
effective search space: 2018966450
effective search space used: 2018966450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)