Query 020190
Match_columns 329
No_of_seqs 223 out of 1715
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 13:09:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020190.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020190hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qr0_A 4'-phosphopantetheinyl 100.0 2.4E-40 8.2E-45 301.5 22.5 211 42-288 1-211 (228)
2 2c43_A Aminoadipate-semialdehy 100.0 1.8E-39 6.2E-44 310.0 21.8 263 40-322 24-297 (323)
3 3f09_A Holo-[acyl-carrier-prot 99.7 2.6E-17 8.8E-22 139.3 8.5 126 133-286 12-140 (143)
4 1fth_A ACPS, acyl carrier prot 99.7 1.1E-16 3.7E-21 131.5 11.4 111 155-286 6-118 (122)
5 1f7l_A Holo-(acyl carrier prot 99.6 3.4E-15 1.2E-19 122.1 9.9 110 155-286 4-118 (121)
6 2was_A 3-oxoacyl-[acyl-carrier 99.6 4.9E-15 1.7E-19 121.7 8.5 117 154-285 2-120 (122)
7 3hyk_A Holo-[acyl-carrier-prot 99.6 1.8E-14 6.1E-19 118.6 10.7 110 155-286 7-119 (122)
8 3h88_A Holo-[acyl-carrier-prot 99.6 1.7E-14 5.7E-19 119.9 10.6 117 155-285 7-127 (129)
9 2bdd_A ACP-synthase; structura 99.4 1.3E-13 4.3E-18 120.9 7.7 123 154-287 25-165 (182)
10 2qg8_A Acyl carrier protein sy 99.4 1.3E-13 4.3E-18 119.0 6.6 122 155-287 7-146 (163)
11 3gwm_A Holo-[acyl-carrier-prot 99.4 3.7E-13 1.3E-17 111.7 8.7 115 155-286 4-128 (129)
12 2wds_A Holo-[acyl-carrier-prot 99.4 7.8E-14 2.7E-18 117.8 4.5 116 155-285 25-142 (143)
13 3ota_A Holo-[acyl-carrier-prot 99.3 6E-12 2.1E-16 104.4 10.5 117 155-285 7-127 (129)
14 3nfd_A Phosphopantetheine prot 99.2 2.1E-12 7.2E-17 110.2 1.8 117 155-285 9-150 (153)
15 1f7l_A Holo-(acyl carrier prot 99.1 1.5E-10 5.1E-15 94.3 7.6 86 61-151 26-115 (121)
16 3f09_A Holo-[acyl-carrier-prot 99.0 8.6E-10 2.9E-14 93.0 8.4 83 61-150 50-136 (143)
17 3hyk_A Holo-[acyl-carrier-prot 98.8 3.2E-08 1.1E-12 81.0 9.4 82 61-149 29-114 (122)
18 1fth_A ACPS, acyl carrier prot 98.7 5.7E-08 2E-12 79.1 9.6 83 61-149 28-113 (122)
19 3gwm_A Holo-[acyl-carrier-prot 98.6 6.6E-08 2.3E-12 79.9 7.6 84 62-148 27-122 (129)
20 3ota_A Holo-[acyl-carrier-prot 98.6 9.3E-08 3.2E-12 79.1 7.8 83 62-148 31-122 (129)
21 3h88_A Holo-[acyl-carrier-prot 98.5 1.3E-07 4.6E-12 78.1 7.2 84 61-148 30-122 (129)
22 2was_A 3-oxoacyl-[acyl-carrier 98.5 3.4E-07 1.1E-11 74.6 8.0 85 61-149 22-116 (122)
23 2uv9_A Fatty acid synthase alp 98.5 1.9E-08 6.4E-13 113.0 0.0 117 153-284 1758-1876(1878)
24 2qg8_A Acyl carrier protein sy 98.4 4.5E-07 1.5E-11 77.9 7.6 87 62-149 30-140 (163)
25 2bdd_A ACP-synthase; structura 98.4 5.7E-07 1.9E-11 78.5 6.9 89 61-150 48-160 (182)
26 3nfd_A Phosphopantetheine prot 98.3 6.2E-07 2.1E-11 76.2 6.2 87 62-148 32-145 (153)
27 2wds_A Holo-[acyl-carrier-prot 98.3 1.8E-07 6.2E-12 78.7 2.5 85 62-149 48-138 (143)
28 2uv8_A Fatty acid synthase sub 98.2 1.3E-07 4.4E-12 106.5 0.0 117 153-284 1766-1884(1887)
29 1qr0_A 4'-phosphopantetheinyl 97.3 0.0019 6.6E-08 57.7 11.1 87 59-151 117-206 (228)
30 2uv8_A Fatty acid synthase sub 96.8 0.00019 6.6E-09 81.2 0.0 83 61-147 1787-1879(1887)
31 2uv9_A Fatty acid synthase alp 96.7 0.00027 9.1E-09 79.9 0.0 83 61-147 1779-1871(1878)
32 2c43_A Aminoadipate-semialdehy 95.6 0.063 2.1E-06 50.5 10.4 86 59-147 156-251 (323)
33 2z0r_A Putative uncharacterize 65.1 1.8 6.2E-05 33.5 0.7 17 203-219 58-75 (103)
34 1b3q_A Protein (chemotaxis pro 37.7 6.1 0.00021 37.2 -0.4 32 133-165 138-169 (379)
35 3kat_A Nacht, LRR and PYD doma 24.1 69 0.0024 24.8 3.7 42 173-214 42-88 (107)
No 1
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1
Probab=100.00 E-value=2.4e-40 Score=301.50 Aligned_cols=211 Identities=26% Similarity=0.433 Sum_probs=183.9
Q ss_pred EEEEEEeCCCCCChhhHHHHhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCceeEecCCCCccE
Q 020190 42 THFWYVLPDEVKSESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGKPE 121 (329)
Q Consensus 42 v~lw~~~~~~~~~~~~~~~~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~g~~p~~i~~~~~~~GKP~ 121 (329)
++||.++++...+++.++.+.++|+++|++++.+|+++++|.+|++||.++|++++++ +|++|.+|.|.++++|||+
T Consensus 1 ~~v~~~~~~~~~~~~~~~~~~~~Ls~~E~~~~~~~~~~~~r~~~la~R~~~r~al~~~---lg~~~~~i~i~~~~~GkP~ 77 (228)
T 1qr0_A 1 MKIYGIYMDRPLSQEENERFMTFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQ---YQLDKSDIRFSTQEYGKPC 77 (228)
T ss_dssp CEEEEEECSSCCCHHHHHHHHTTSCHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHH---TTCCGGGCCCEECTTSCEE
T ss_pred CEEEEEECCCcCCHHHHHHHHhhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH---hCcCHHHcEEeeCcCCCce
Confidence 4799999876556677889999999999999999999999999999999999999998 7999999999999999999
Q ss_pred EeccCCCCCCCCCceEEeccCCCceeEEEecccccccchhhhhhhhhhhHHHHHHhcCCHHHHHHHHcCCChhHHHHHHH
Q 020190 122 VDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELI 201 (329)
Q Consensus 122 l~~~~~~~~~~~~l~fSISHs~~~v~~avs~~~~vGVDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~ 201 (329)
+.. .++++||||||+++++||++ ..+||||||.+++. + .++++++||+.|++++.+.+ .+.+.+.|+
T Consensus 78 l~~-------~~~~~~SiSHs~~~a~~a~~-~~~vGiDie~i~~~---~-~~~~~~~~t~~E~~~l~~~~-~~~~~~~~~ 144 (228)
T 1qr0_A 78 IPD-------LPDAHFNISHSGRWVIGAFD-SQPIGIDIEKTKPI---S-LEIAKRFFSKTEYSDLLAKD-KDEQTDYFY 144 (228)
T ss_dssp CTT-------CTTCEEEEEEETTEEEEEEE-SSCCEEEEEECCCC---C-HHHHSSSSCHHHHHHHHHSC-HHHHHHHHH
T ss_pred EeC-------CCCceEEecccCCeEEEEEC-CCCEEEEeEECCCC---c-HHHHHHhCCHHHHHHHHhCC-hhhHHHHHH
Confidence 973 35899999999999999998 68999999998763 2 38899999999999999876 356778999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCceEEEEecCCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEE
Q 020190 202 KLWTLKEAYVKAVGRGFSAAPFNTFTIRARVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAI 281 (329)
Q Consensus 202 ~~WtlKEA~~Ka~G~GL~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Av 281 (329)
++||+||||+||+|+||. .+|+.|+|..++.+.+.+.+. ....+|++..+.++++|++||
T Consensus 145 ~~wt~KEA~~Ka~G~gl~-~~~~~~~i~~~~~g~~~~~~~-------------------~~~~~~~~~s~~~~~~y~~Av 204 (228)
T 1qr0_A 145 HLWSMKESFIKQEGKGLS-LPLDSFSVRLHQDGQVSIELP-------------------DSHSPCYIKTYEVDPGYKMAV 204 (228)
T ss_dssp HHHHHHHHHHHHHCSTTS-CCSSCCEEEECGGGCEEEECS-------------------CTTSCCEEEEECSCTTEEEEE
T ss_pred HHHHHHHHHHHHhCCCCC-CCCceEEEeeCCCCCeEEecC-------------------CCCCCeEEEEEecCCCEEEEE
Confidence 999999999999999998 799999998876554444321 124579999999999999999
Q ss_pred EEeccCC
Q 020190 282 CIEKENS 288 (329)
Q Consensus 282 a~~~~~~ 288 (329)
|+..+..
T Consensus 205 ~~~~~~~ 211 (228)
T 1qr0_A 205 CAAHPDF 211 (228)
T ss_dssp EESSSCC
T ss_pred EEecCCC
Confidence 9988754
No 2
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A*
Probab=100.00 E-value=1.8e-39 Score=309.96 Aligned_cols=263 Identities=18% Similarity=0.324 Sum_probs=203.7
Q ss_pred CeEEEEEEeCCCCC-ChhhHHHHhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCceeEecCCCC
Q 020190 40 METHFWYVLPDEVK-SESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYG 118 (329)
Q Consensus 40 ~~v~lw~~~~~~~~-~~~~~~~~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~g~~p~~i~~~~~~~G 118 (329)
.....|.++...+. .+..+..+..+|+++|++++.+|+++++|.+||+||+++|.+++++ +|++|.+|.|.++++|
T Consensus 24 ~~~~rw~~~~~~W~~~~~~~~~~~~~Ls~~E~~r~~r~~~~~~r~~~LagR~l~r~al~~~---lg~~~~~i~i~~~~~G 100 (323)
T 2c43_A 24 MEGVRWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEK---LNIPWNHIRLQRTAKG 100 (323)
T ss_dssp CCCEEEEECGGGCCCCHHHHHHHHHTSCHHHHHHHHTCSBHHHHHHHHHHHHHHHHHHHHH---SCCCGGGCCEEECTTS
T ss_pred CCceEEEEEcCCCCCCHHHHHHHHccCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH---HCcCHHHeeEeeCCCC
Confidence 34567888777774 3455667778999999999999999999999999999999999998 8999999999999999
Q ss_pred ccEEeccCCCCCCCCCceEEeccCCCceeEEEecccccccchhhhhhh---hhhhHHHHHHhcCCHHHHHHHHcCCChhH
Q 020190 119 KPEVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRR---LKNKILAFAKRYFSPDEVKLLTAISDPEI 195 (329)
Q Consensus 119 KP~l~~~~~~~~~~~~l~fSISHs~~~v~~avs~~~~vGVDIE~~~~~---~~~~~~~l~~~~fs~~E~~~l~~~~~~~~ 195 (329)
||++..+.. ...++++||||||+++++||++....||||||.+.+. ...++.++++++||+.|++++.+.+++..
T Consensus 101 KP~l~~~~~--~~~~~~~fSISHs~~~av~avs~~~~VGIDIE~i~~~~~~~~~~~~~~~~r~ft~~E~~~l~~~~~~~~ 178 (323)
T 2c43_A 101 KPVLAKDSS--NPYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDEWT 178 (323)
T ss_dssp CEEECCC----CCSSSCEEEEEEETTEEEEEEESSSEEEEEEEECCCCSSSCHHHHHHHTGGGSCHHHHHHHTTSSSHHH
T ss_pred CceeeCCcc--CCCCCceEEEEEeCCceeeeecCCCCceeeeEEeechhhhhhhhHHHHHHHhCCHHHHHHHHcCCChhH
Confidence 999985211 0135899999999999999999778999999998753 11345688999999999999998775445
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEecCCC--ceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeec
Q 020190 196 QRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIRARVVK--MGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDL 273 (329)
Q Consensus 196 ~~~~f~~~WtlKEA~~Ka~G~GL~~~~l~~~~~~~~~~~--~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l 273 (329)
+.+.|+++||+||||+||+|.||. .+|+.++|..++.. .+... ....+.++ +....+|+|..+.+
T Consensus 179 ~~~~f~~~WtaKEA~~KA~G~Gl~-~~l~~iev~~~p~~~~~g~p~-------~~~~v~l~-----g~~~~~w~~~~~~~ 245 (323)
T 2c43_A 179 QLDMFYRNWALKESFIKAIGVGLG-FELQRLEFDLSPLNLDIGQVY-------KETRLFLD-----GEEEKEWAFEESKI 245 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSC-CCGGGEEEECCSSCCCTTCCB-------CCCEEEET-----TEECTTEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCC-CCCCeEEEEeCccccccCCce-------ecceeeec-----CCCCCCeEEEEEec
Confidence 678999999999999999999998 79999999876321 01100 00011111 12346899999999
Q ss_pred CCCeEEEEEEeccCCCCCCC-----CcceeeEEeeecCCccceeccCCcccccc
Q 020190 274 AGSHYAAICIEKENSAGGEA-----GVPMRLTVWKTIPFVEDERVSGTGAVVPI 322 (329)
Q Consensus 274 ~~~~~~Ava~~~~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 322 (329)
+++|++|||+..+....... .+......|++|.+ |.+|+.+.|+.|.
T Consensus 246 ~~~y~~Ava~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~--~~l~~~a~~~~~~ 297 (323)
T 2c43_A 246 DEHHFVAVALRKPDGSRHQDVPSQDDSKPTQRQFTILNF--NDLMSSAVPMTPE 297 (323)
T ss_dssp ETTEEEEEEEECC----------------CCCCCEEECH--HHHTTTCCCCSCC
T ss_pred CCCcEEEEEEEcCCcccccccccccccccCCCCeEEeeH--HHHHhhcCCCCCc
Confidence 99999999999875432110 11122578999999 8899999999885
No 3
>3f09_A Holo-[acyl-carrier-protein] synthase; structural genomics, I deseases, fatty acid biosynthesis, lipid synthesis; 1.82A {Staphylococcus aureus subsp} PDB: 4dxe_A
Probab=99.70 E-value=2.6e-17 Score=139.26 Aligned_cols=126 Identities=17% Similarity=0.162 Sum_probs=91.7
Q ss_pred CCceEEeccCCCceeEEEecccccccchhhhhhhhh--hhHHHHHHhcCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHH
Q 020190 133 PPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLK--NKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAY 210 (329)
Q Consensus 133 ~~l~fSISHs~~~v~~avs~~~~vGVDIE~~~~~~~--~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~WtlKEA~ 210 (329)
+--.||+||++++.+++ |||||+.+.+-.. .....+++++||++|++++.+.+.+..+.+.|+..|++|||+
T Consensus 12 ~~~~~n~s~~~~~mI~g------IGiDIv~i~Ri~~~~~r~~~f~~rift~~E~~~~~~~~~~~~~~~~lA~RwAaKEA~ 85 (143)
T 3f09_A 12 DLGTENLYFQSNAMIHG------IGVDLIEIDRIQALYSKQPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAF 85 (143)
T ss_dssp CTTCCCHHHHCCCSEEE------EEEEEEEHHHHHHHHHTCGGGHHHHSCHHHHHHHHTCSSHHHHHHHHHHHHHHHHHH
T ss_pred ccceeeccccCCCEEEE------EEEEEEEehHHHHHHhhhHHHHHHhCCHHHHHHhhccCchhhHHHHHHHHHHHHHHH
Confidence 44579999999998764 8999999876311 111367899999999999998765556678899999999999
Q ss_pred HhhcCCCCCC-CCCceEEEEecCCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEecc
Q 020190 211 VKAVGRGFSA-APFNTFTIRARVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIEKE 286 (329)
Q Consensus 211 ~Ka~G~GL~~-~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~~~ 286 (329)
.||+|+|+.. .++++++|..++.+.+.+.+. + ..|. .++..+.+|++|+|+-..
T Consensus 86 ~KAlG~G~~~~~~~~dIeI~~d~~GkP~l~l~-------------------g--~~~~-vSISH~~~yAvA~vv~e~ 140 (143)
T 3f09_A 86 SKALGTGLGKHVAFNDIDCYNDELGKPKIDYE-------------------G--FIVH-VSISHTEHYAMSQVVLEK 140 (143)
T ss_dssp HHHHC------CCGGGCCEEEC--CCEEECCT-------------------T--EEEE-EEEEECSSEEEEEEEEEE
T ss_pred HHHhccCcccCcCcceEEEEECCCCCeEEEEc-------------------C--CcEE-EEEECCCCEEEEEEEEEe
Confidence 9999999862 468999998776555544220 1 3465 467888999999998764
No 4
>1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A*
Probab=99.69 E-value=1.1e-16 Score=131.46 Aligned_cols=111 Identities=24% Similarity=0.273 Sum_probs=86.8
Q ss_pred ccccchhhhhhhhh--hhHHHHHHhcCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEecC
Q 020190 155 PIGIDVEEKQRRLK--NKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIRARV 232 (329)
Q Consensus 155 ~vGVDIE~~~~~~~--~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~WtlKEA~~Ka~G~GL~~~~l~~~~~~~~~ 232 (329)
.||||||.+.+... .....+++++||++|++++.+.+ +..+.+.|+.+||+|||++||+|+|+...+|+.++|..++
T Consensus 6 ~iGvDie~i~r~~~~~~~~~~~~~r~~t~~E~~~~~~~~-~~~~~~~~a~rwaaKEA~~KalG~gl~~~~~~~i~i~~~~ 84 (122)
T 1fth_A 6 GHGIDIEELASIESAVTRHEGFAKRVLTALEMERFTSLK-GRRQIEYLAGRWSAKEAFSKAMGTGISKLGFQDLEVLNNE 84 (122)
T ss_dssp EEEEEEEEHHHHHHHHHTTSSHHHHHSCHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHTSCSSSSCGGGCEEEECT
T ss_pred ceeEEEEEcchHHHHHHhhHHHHHHcCCHHHHHHHHcCC-cchHHHHHHHHHHHHHHHHHHhCCCccccccceEEEecCC
Confidence 69999999875210 01136789999999999999876 3567789999999999999999999973489999998876
Q ss_pred CCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEecc
Q 020190 233 VKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIEKE 286 (329)
Q Consensus 233 ~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~~~ 286 (329)
.+.+.+.+. . ...|...++..+.+|++|+|+...
T Consensus 85 ~g~P~l~~~-------------------~-~~~~~~~Sish~~~ya~A~vv~~~ 118 (122)
T 1fth_A 85 RGAPYFSQA-------------------P-FSGKIWLSISHTDQFVTASVILEE 118 (122)
T ss_dssp TSCEEEEEC-------------------S-CCSEEEEEEEECSSEEEEEEEEEC
T ss_pred CCCeEEEec-------------------C-CCCeEEEEEECCCCCEEEEEEEEe
Confidence 555555331 0 124778889999999999998764
No 5
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A*
Probab=99.60 E-value=3.4e-15 Score=122.12 Aligned_cols=110 Identities=22% Similarity=0.247 Sum_probs=85.3
Q ss_pred ccccchhhhhhhhhhhH----HHHHHhcCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhcCCCCCC-CCCceEEEE
Q 020190 155 PIGIDVEEKQRRLKNKI----LAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSA-APFNTFTIR 229 (329)
Q Consensus 155 ~vGVDIE~~~~~~~~~~----~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~WtlKEA~~Ka~G~GL~~-~~l~~~~~~ 229 (329)
.||||||.+.+. .+. ..+++++||++|++++.+.+ +..+.+.|+..|++|||+.||+|+|+.. .+++.++|.
T Consensus 4 ~iGvDi~~i~r~--~~~~~~~~~~~~r~~t~~E~~~~~~~~-~~~~~~~la~rwaaKEA~~Kalg~g~~~~~~~~~i~i~ 80 (121)
T 1f7l_A 4 GIGLDITELKRI--ASMAGRQKRFAERILTRSELDQYYELS-EKRKNEFLAGRFAAKEAFSKAFGTGIGRQLSFQDIEIR 80 (121)
T ss_dssp EEEEEEEEHHHH--HHHHHHCTTHHHHHCCHHHHHHHTTSC-HHHHHHHHHHHHHHHHHHHHHHTSCSBTTBCGGGCEEE
T ss_pred eEEEeEEEchHH--HHHHHhhHHHHHHcCCHHHHHHHHccC-cccHHHHHHHHHHHHHHHHHHhCCCCCCCcceEEEEEE
Confidence 689999998763 222 46789999999999999876 3455666779999999999999999972 478999998
Q ss_pred ecCCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEecc
Q 020190 230 ARVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIEKE 286 (329)
Q Consensus 230 ~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~~~ 286 (329)
.++.+.+.+.+.+ ....|...++..+.+|++|+|+...
T Consensus 81 ~~~~G~P~l~~~~-------------------~~~~~~~~SiSH~~~~a~A~v~~~~ 118 (121)
T 1f7l_A 81 KDQNGKPYIICTK-------------------LSPAAVHVSITHTKEYAAAQVVIER 118 (121)
T ss_dssp ECTTSCEEEEETT-------------------TEEEEEEEEEEECSSEEEEEEEEEC
T ss_pred ECCCCCcEEEECc-------------------cccCcEEEEEeCCCCcEEEEEEEEe
Confidence 8776666654311 1113667788999999999998764
No 6
>2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B
Probab=99.57 E-value=4.9e-15 Score=121.74 Aligned_cols=117 Identities=17% Similarity=0.228 Sum_probs=82.6
Q ss_pred cccccchhhhhhhhhhhHHHHHHhcCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhcCCC-CC-CCCCceEEEEec
Q 020190 154 VPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRG-FS-AAPFNTFTIRAR 231 (329)
Q Consensus 154 ~~vGVDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~WtlKEA~~Ka~G~G-L~-~~~l~~~~~~~~ 231 (329)
..||||||.+.+.. .....+++++||+.|++++.+.+. +.+.|+..|++|||++||+|+| +. ..+|++++|..+
T Consensus 2 ~~iGiDI~~i~r~~-~~~~~~~~r~ft~~E~~~~~~~~~---~~~~la~rwaaKEA~~KAlg~g~~~~~~~~~~iei~~~ 77 (122)
T 2was_A 2 GGVGVDVELITSIN-VENDTFIERNFTPQEIEYCSAQPS---VQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRV 77 (122)
T ss_dssp CCEEEEEEEGGGCC-SSCHHHHHHHSCHHHHHHHHTSSS---HHHHHHHHHHHHHHHHHHHCC-------CCTTEEEEEE
T ss_pred CCeeEEEEEcchhh-hhhHHHHHHcCCHHHHHHHHcCCc---HHHHHHHHHHHHHHHHHHhCCCccCCCCCCCEEEEEEC
Confidence 47999999988621 123578899999999999998653 4578999999999999999996 43 257999999887
Q ss_pred CCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEec
Q 020190 232 VVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIEK 285 (329)
Q Consensus 232 ~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~~ 285 (329)
+.+.+.+.+.+.. ... ... ....+|++ ++..+.+|.+|+|+-.
T Consensus 78 ~~G~P~l~l~g~~----~~~-~~~-----~~~~~~~v-SiSH~~~~A~A~vi~~ 120 (122)
T 2was_A 78 NKNAPAVELHGNA----KKA-AEE-----AGVTDVKV-SISHDDLQAVAVAVST 120 (122)
T ss_dssp TTEEEEEEECHHH----HHH-HHT-----TTCCEEEE-EEEECSSEEEEEEEEE
T ss_pred CCCCeEEEEChHH----HHH-HHH-----cCCCeEEE-EEEcCCCcEEEEEEEE
Confidence 7666666654321 000 010 11245666 6788899999999864
No 7
>3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} SCOP: d.150.1.0
Probab=99.56 E-value=1.8e-14 Score=118.58 Aligned_cols=110 Identities=21% Similarity=0.224 Sum_probs=84.3
Q ss_pred ccccchhhhhhhhh--hhHHHHHHhcCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhcCCCCC-CCCCceEEEEec
Q 020190 155 PIGIDVEEKQRRLK--NKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS-AAPFNTFTIRAR 231 (329)
Q Consensus 155 ~vGVDIE~~~~~~~--~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~WtlKEA~~Ka~G~GL~-~~~l~~~~~~~~ 231 (329)
.|||||+.+.+-.. .....+++++||+.|++++...+ ...+.+.|+..|++|||+.||+|+|+. +.+|++++|..+
T Consensus 7 giGiDiv~i~ri~~~~~~~~~f~~r~ft~~E~~~~~~~~-~~~~~~~la~rwaaKEA~~KAlg~G~~~~~~~~dieI~~~ 85 (122)
T 3hyk_A 7 GIGIDIIELNRIEKMLDGKLKFMERILTENERNVAKGLK-GSRLTEFVAGRFAAKEAYSKAVGTGIGKEVSFLDIEVRND 85 (122)
T ss_dssp EEEEEEEEHHHHHHHHC---CHHHHHSCHHHHHHHTTCC-THHHHHHHHHHHHHHHHHHHHHTSCSSSSCCGGGCEEEEC
T ss_pred EEEEEEEEchHHHHHHHhhhhHHHHcCCHHHHHHHHhCC-cchHHHHHHHHHHHHHHHHHHhccCccCCcCceEEEEEEC
Confidence 58999999876310 11236889999999999998876 355678899999999999999999996 357999999887
Q ss_pred CCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEecc
Q 020190 232 VVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIEKE 286 (329)
Q Consensus 232 ~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~~~ 286 (329)
+.+.+.+.+. ....|++ ++..+.+|++|+|+-..
T Consensus 86 ~~G~P~v~l~--------------------~~~~~~v-SISH~~~~A~A~vv~e~ 119 (122)
T 3hyk_A 86 DRGKPILITS--------------------TEHIVHL-SISHSKEFAVAQVVLES 119 (122)
T ss_dssp TTSCEEEECS--------------------CSSEEEE-EEEECSSEEEEEEEEEC
T ss_pred CCCCeEEEEc--------------------CCCCEEE-EEECCCCEEEEEEEEee
Confidence 7666666431 1235764 67889999999998764
No 8
>3h88_A Holo-[acyl-carrier-protein] synthase; alpha-beta structure, structural genomics of infectious diseases, cytoplasm, fatty acid biosynthesis; HET: COA; 1.85A {Vibrio cholerae} PDB: 3ota_A* 3qmn_A*
Probab=99.56 E-value=1.7e-14 Score=119.90 Aligned_cols=117 Identities=24% Similarity=0.235 Sum_probs=86.5
Q ss_pred ccccchhhhhhhhh--hh-HHHHHHhcCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhcCCCCC-CCCCceEEEEe
Q 020190 155 PIGIDVEEKQRRLK--NK-ILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS-AAPFNTFTIRA 230 (329)
Q Consensus 155 ~vGVDIE~~~~~~~--~~-~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~WtlKEA~~Ka~G~GL~-~~~l~~~~~~~ 230 (329)
.|||||+.+.+-.. .. -..+++++||+.|++++.+.+. +.+.|+..|++|||++||+|+|+. +.++++++|..
T Consensus 7 GiGiDIv~i~ri~~~~~r~~~~f~~r~ft~~E~~~~~~~~~---~~~~la~rwaaKEA~~KAlg~g~~~~~~~~dieI~~ 83 (129)
T 3h88_A 7 GLGTDIAEIERVEKALARSGENFARRILTDSELEQFHASKQ---QGRFLAKRFAAKEAASKALGTGIAQGVTFHDFTISH 83 (129)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHCSC---HHHHHHHHHHHHHHHHHHTTSCSCTTCCGGGEEEEE
T ss_pred EEEEEEEEcHHHHHHHHhhhHHHHHHhCCHHHHHHHhcCch---HHHHHHHHHHHHHHHHHHhccCccCCccceEEEEEE
Confidence 58999999876310 11 2578899999999999998763 567899999999999999999996 35789999988
Q ss_pred cCCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEec
Q 020190 231 RVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIEK 285 (329)
Q Consensus 231 ~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~~ 285 (329)
++.+.+.+.+.+...... .. .....|++ ++..+.+|++|+|+-.
T Consensus 84 ~~~G~P~~~l~g~~~~~~-----~~-----~g~~~~~v-SISH~~~~A~A~vi~e 127 (129)
T 3h88_A 84 DKLGKPLLILSGQAAELA-----SQ-----LQVENIHL-SISDERHYAMATVILE 127 (129)
T ss_dssp CTTSCEEEEECHHHHHHH-----HH-----TTCCEEEE-EEEECSSEEEEEEEEE
T ss_pred CCCCCEEEEECHHHHHHH-----HH-----cCCCEEEE-EEECCCCeEEEEEEEE
Confidence 877777787654211111 10 11334555 6788899999999864
No 9
>2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii}
Probab=99.44 E-value=1.3e-13 Score=120.86 Aligned_cols=123 Identities=19% Similarity=0.153 Sum_probs=73.1
Q ss_pred cccccchhhhhhhh--hhhHHHHHHhcCCHHHHHHHHcCCCh-----------hHHHHHHHHHHHHHHHHHhhcCCCCC-
Q 020190 154 VPIGIDVEEKQRRL--KNKILAFAKRYFSPDEVKLLTAISDP-----------EIQRQELIKLWTLKEAYVKAVGRGFS- 219 (329)
Q Consensus 154 ~~vGVDIE~~~~~~--~~~~~~l~~~~fs~~E~~~l~~~~~~-----------~~~~~~f~~~WtlKEA~~Ka~G~GL~- 219 (329)
..|||||+.+.+-. ......+++++||+.|++++...+.. +.+.+.|...|++|||++||+|+|+.
T Consensus 25 ~gIGvDIv~I~Ri~~~l~r~~rf~~RifT~~E~~~~~~~~~~~~~~~~~~~~~~~~a~~lAgRfAAKEAv~KAlGtGi~~ 104 (182)
T 2bdd_A 25 IGIGTDILCVNRIYKILEKNINFIKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSMGRGLSS 104 (182)
T ss_dssp EEEEEEEEEHHHHHHHHHHCTTHHHHHSCHHHHHHHHTC-----------CHHHHHHHHHHHHHHHHHHHHHHTTC----
T ss_pred eceEEEEEEehhHHHHHhccHHHHHhhCCHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 47999999987521 01113678999999999999876532 12244556899999999999999996
Q ss_pred ----CCCCceEEEEecCCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEeccC
Q 020190 220 ----AAPFNTFTIRARVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIEKEN 287 (329)
Q Consensus 220 ----~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~~~~ 287 (329)
+.+|++++|..++.+.+.+.+.+.......+ .....|.+ ++..+.+|++|++....+
T Consensus 105 ~~~~g~~~~dIEI~~d~~GkP~v~L~g~a~~~~~~----------~gi~~i~l-SISHd~~yavA~V~~~~~ 165 (182)
T 2bdd_A 105 ISKYGLSMNDIEIKNDKYGKPHVYLYGKAKKVAYE----------MGIVKIFL-SISDEKIINSQTNNISSN 165 (182)
T ss_dssp -----CCGGGEEEEECTTSCEEEEECHHHHHHHHH----------HTCCEEEE-EEEEEC------------
T ss_pred cccCCcCcCEEEEEECCCCCEEEEECHHHHHHHHH----------cCCCEEEE-EEECCCCcEEEEEEeccc
Confidence 3579999999887777777775421100000 11345776 678889999999977644
No 10
>2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii}
Probab=99.43 E-value=1.3e-13 Score=119.02 Aligned_cols=122 Identities=18% Similarity=0.148 Sum_probs=76.6
Q ss_pred ccccchhhhhhhhh--hhHHHHHHhcCCHHHHHHHHcCCChh-----------HHHHHHHHHHHHHHHHHhhcCCCCC--
Q 020190 155 PIGIDVEEKQRRLK--NKILAFAKRYFSPDEVKLLTAISDPE-----------IQRQELIKLWTLKEAYVKAVGRGFS-- 219 (329)
Q Consensus 155 ~vGVDIE~~~~~~~--~~~~~l~~~~fs~~E~~~l~~~~~~~-----------~~~~~f~~~WtlKEA~~Ka~G~GL~-- 219 (329)
.|||||+.+.+-.. .....+++++||+.|++++...+... .+.+.|...|++|||+.||+|+|+.
T Consensus 7 gIGiDIv~I~Ri~~~l~r~~~f~~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~lAgRfAAKEA~~KAlGtGi~~~ 86 (163)
T 2qg8_A 7 GIGTDILCVNRIYKILEKNINFIKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSMGRGLSSI 86 (163)
T ss_dssp EEEEEEEEHHHHHHHHHHCGGGHHHHSCHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBC--
T ss_pred ceEEeEEEehhHHHHHhccHHHHHhcCCHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 68999998875210 11135789999999999998775321 1245566899999999999999996
Q ss_pred ---CCCCceEEEEecCCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEeccC
Q 020190 220 ---AAPFNTFTIRARVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIEKEN 287 (329)
Q Consensus 220 ---~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~~~~ 287 (329)
+.++++++|..++.+.+.+.+.+... .. ... .....|++ ++..+.+|++|++.-..+
T Consensus 87 ~~~~~~~~dIeI~~d~~G~P~v~l~g~a~----~~-~~~-----~g~~~i~l-SISHd~~~avA~v~~~~~ 146 (163)
T 2qg8_A 87 SKYGLSMNDIEIKNDKYGKPHVYLYGKAK----KV-AYE-----MGIVKIFL-SISDEKIINSQTNNISSN 146 (163)
T ss_dssp ---CBCGGGEEEEECTTSCEEEEECHHHH----HH-HHH-----TTCCEEEE-EEEEEEC-----------
T ss_pred ccCCccccEEEEEECCCCCEEEEEChHHH----HH-HHH-----cCCCEEEE-EEECCCCcEEEEEEeccc
Confidence 35799999988877777777653211 10 010 11345776 678889999999977654
No 11
>3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* 4hc6_A
Probab=99.42 E-value=3.7e-13 Score=111.72 Aligned_cols=115 Identities=18% Similarity=0.142 Sum_probs=83.5
Q ss_pred ccccchhhhhhhhh--hh-HHHHHHhcCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhcCCCCCC-------CCCc
Q 020190 155 PIGIDVEEKQRRLK--NK-ILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSA-------APFN 224 (329)
Q Consensus 155 ~vGVDIE~~~~~~~--~~-~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~WtlKEA~~Ka~G~GL~~-------~~l~ 224 (329)
.|||||+.+.+-.. .. -..++ ++||+.|++++...+ ..+.+.|...|++|||+.||+|+|+.+ ..++
T Consensus 4 giGiDIv~i~ri~~~~~r~~~~f~-r~ft~~E~~~~~~~~--~~~~~~la~rwAaKEA~~KAlg~g~~g~~~~~~~~~~~ 80 (129)
T 3gwm_A 4 GVGIDLVSIPDFAEQVDRPGTVFA-ETFTPGERRDAADKS--SSAARHLAARWAAKEAVIKAWSSSRFSKRPALPEGIHR 80 (129)
T ss_dssp EEEEEEEEHHHHHHHHTSCCHHHH-TTSCHHHHHHHTSTT--SHHHHHHHHHHHHHHHHHHHHHTSTTCCSSSCCTTHHH
T ss_pred EEEEEEEEchHHHHHHhhchhHHH-hhCCHHHHHHHHhCc--hhHHHHHHHHHHHHHHHHHHhccCccccccccCcccee
Confidence 48999999876310 00 13677 999999999998743 346788999999999999999999853 2389
Q ss_pred eEEEEecCCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEecc
Q 020190 225 TFTIRARVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIEKE 286 (329)
Q Consensus 225 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~~~ 286 (329)
+++|..++.+.+.+.+.+... .. .....|++ ++..+.+|++|+|+-..
T Consensus 81 dIeI~~~~~G~P~v~l~g~~~----~~---------~~~~~~~v-SISH~~~~A~A~vi~e~ 128 (129)
T 3gwm_A 81 DIEVVTDMWGRPKVRLSGEIA----KH---------LEDVTIHV-SLTHEDQTAAAVAIIEE 128 (129)
T ss_dssp HEEEEECTTSCEEEEECHHHH----HH---------TTTCEEEE-EEEEETTEEEEEEEEEC
T ss_pred EEEEEECCCCCeEEEECHHHH----Hh---------cCCCcEEE-EEeCCCCEEEEEEEEEe
Confidence 999988877777777643210 00 01234554 67888999999998653
No 12
>2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A*
Probab=99.42 E-value=7.8e-14 Score=117.82 Aligned_cols=116 Identities=21% Similarity=0.184 Sum_probs=83.8
Q ss_pred ccccchhhhhhhhh--hhHHHHHHhcCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEecC
Q 020190 155 PIGIDVEEKQRRLK--NKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIRARV 232 (329)
Q Consensus 155 ~vGVDIE~~~~~~~--~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~WtlKEA~~Ka~G~GL~~~~l~~~~~~~~~ 232 (329)
.|||||+.+.+-.. .....+++++||+.|++++.+.+. +.+.|+..|++|||+.||+|+|.. .+|++++|..++
T Consensus 25 giGiDIv~i~ri~~~~~r~~~f~~rift~~E~~~~~~~~~---~~~~lAgRfAAKEAv~KAlG~G~~-~~~~dieI~~~~ 100 (143)
T 2wds_A 25 GVGIDVAEVERFGAALERTPALAGRLFLESELLLPGGERR---GVASLAARFAAKEALAKALGAPAG-LLWTDAEVWVEA 100 (143)
T ss_dssp EEEEEEEEHHHHHHHHHHCTTHHHHHCCGGGGBCTTSSBC---CHHHHHHHHHHHHHHHHHTTCCTT-CCGGGEEEEECT
T ss_pred ceEEEEEEehhHHHHHhhhHHHHHhcCCHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhCCCCC-CCceEEEEEeCC
Confidence 69999999875210 001357899999999998877542 467899999999999999999976 789999998887
Q ss_pred CCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEec
Q 020190 233 VKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIEK 285 (329)
Q Consensus 233 ~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~~ 285 (329)
.+.+.+.+.+... .. ... ....+|.+ ++..+.+|++|+|+-.
T Consensus 101 ~G~P~v~l~g~~~----~~-~~~-----~g~~~~~v-SISH~~~~AvA~vi~e 142 (143)
T 2wds_A 101 GGRPRLRVTGTVA----AR-AAE-----LGVASWHV-SLSADAGIASAVVIAE 142 (143)
T ss_dssp TSCEEEEECHHHH----HH-HHH-----HTCCEEEE-EEEEETTEEEEEEEEE
T ss_pred CCCcEEEEChHHH----HH-HHh-----cCCCeEEE-EEECCCCcEEEEEEEe
Confidence 7767776532110 00 000 12346764 7788899999998754
No 13
>3ota_A Holo-[acyl-carrier-protein] synthase; structural genomics, center for structural genomics of infec diseases, csgid; HET: COA; 1.85A {Vibrio cholerae o1 biovar el tor} PDB: 3qmn_A*
Probab=99.33 E-value=6e-12 Score=104.35 Aligned_cols=117 Identities=23% Similarity=0.239 Sum_probs=84.5
Q ss_pred ccccchhhhhhhh--hhh-HHHHHHhcCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhcCCCCC-CCCCceEEEEe
Q 020190 155 PIGIDVEEKQRRL--KNK-ILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS-AAPFNTFTIRA 230 (329)
Q Consensus 155 ~vGVDIE~~~~~~--~~~-~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~WtlKEA~~Ka~G~GL~-~~~l~~~~~~~ 230 (329)
-|||||..+.+-. ... -..+.+++||+.|+++..+... +.+.|...|++|||+.||+|+|+. +..+++++|.-
T Consensus 7 GIG~Div~i~Ri~~~l~r~g~~F~~Rift~~E~~~~~~~~~---~~~~lA~RfAAKEA~~KAlGtg~~~~~~~~dIeI~~ 83 (129)
T 3ota_A 7 GLGTDIAEIERVEKALARSGENFARRILTDSELEQFHASKQ---QGRFLAKRFAAKEAASKALGTGIAQGVTFHDFTISH 83 (129)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHCSC---HHHHHHHHHHHHHHHHHHHTSCSCTTCCGGGEEEEE
T ss_pred EEeeEeeEHHHHHHHHHhhCHHHHHHCCCHHHHHHHHhccc---hHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEEE
Confidence 4899998776521 111 2467899999999999887653 456777899999999999999996 25699999998
Q ss_pred cCCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEec
Q 020190 231 RVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIEK 285 (329)
Q Consensus 231 ~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~~ 285 (329)
++.+.+.+.+.+... ++. .. ....+|++ ++..+.+|.+|+|+-.
T Consensus 84 d~~GkP~v~l~g~~~----~~~-~~-----~~~~~i~l-SiSh~~~~AiA~vIlE 127 (129)
T 3ota_A 84 DKLGKPLLILSGQAA----ELA-SQ-----LQVENIHL-SISDERHYAMATVILE 127 (129)
T ss_dssp CTTCCEEEEECHHHH----HHH-HH-----TTCCEEEE-EEEECSSEEEEEEEEE
T ss_pred CCCCCceEEeChHHH----HHH-HH-----cCCCeEEE-EEeCCCCeEEEEEEEE
Confidence 888888887754321 111 11 12345665 5678899999998754
No 14
>3nfd_A Phosphopantetheine protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A*
Probab=99.22 E-value=2.1e-12 Score=110.21 Aligned_cols=117 Identities=15% Similarity=0.223 Sum_probs=81.0
Q ss_pred ccccchhhhhhhhh--hh-HHHHHHhcCCHHHHHHHHcCCCh----------hHHHHHHHHHHHHHHHHHhhcCCCCC--
Q 020190 155 PIGIDVEEKQRRLK--NK-ILAFAKRYFSPDEVKLLTAISDP----------EIQRQELIKLWTLKEAYVKAVGRGFS-- 219 (329)
Q Consensus 155 ~vGVDIE~~~~~~~--~~-~~~l~~~~fs~~E~~~l~~~~~~----------~~~~~~f~~~WtlKEA~~Ka~G~GL~-- 219 (329)
.|||||+.+.+-.. .. -..+ +++||+.|++++...+.. ..+.+.|...|++|||+.||+|+|+.
T Consensus 9 GIGiDIv~I~Ri~~~l~r~g~~f-~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~lAgrfAAKEA~~KAlg~g~~g~ 87 (153)
T 3nfd_A 9 TVGVDLVHIPGFAEQLSRPGSTF-EQVFSPLERRHAQTRRSAAADATNSSLAGSRTEHLAGRWAAKEAFIKAWSQAIYGK 87 (153)
T ss_dssp EEEEEEEEHHHHHHHHTSTTCGG-GGSSCHHHHHHHHCC------------CCTTHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred EEEEEEEEeHHHHHHHhhccHHH-HhhCCHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHhccccccc
Confidence 58999998875210 00 1245 899999999999876531 12457888999999999999999873
Q ss_pred -------CCCCceEEEEecCCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEE---EeecCCCeEEEEEEec
Q 020190 220 -------AAPFNTFTIRARVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFA---LLDLAGSHYAAICIEK 285 (329)
Q Consensus 220 -------~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~---~~~l~~~~~~Ava~~~ 285 (329)
+..+++++|..++.+.+.+.+.+.... .+ ....|++. ++..+.+|++|+|+-.
T Consensus 88 ~~~~~~~~~~~~dIeI~~d~~G~P~v~l~g~~~~---~~----------~~~~~~v~~~lSISHd~~~AvA~vi~e 150 (153)
T 3nfd_A 88 PPVIEPDLVNFAEIEVLPDRWGRVALQLKGEVAA---KL----------QESIGDVELALSISHDGDYATALCLLR 150 (153)
T ss_dssp CCSSCGGGCCGGGEEEEECTTSCEEEEECHHHHH---HH----------HHHHCSEEEEEEEEEETTEEEEEEEEE
T ss_pred cccccccCCcceEEEEEECCCCCeEEEECHHHHH---Hc----------CCceEEECCceEecCCCCEEEEEEEEE
Confidence 356899999888777777877542110 00 01234442 6778899999999865
No 15
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A*
Probab=99.10 E-value=1.5e-10 Score=94.28 Aligned_cols=86 Identities=20% Similarity=0.337 Sum_probs=69.2
Q ss_pred HhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcCC----CCCCceeEecCCCCccEEeccCCCCCCCCCce
Q 020190 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ----VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLH 136 (329)
Q Consensus 61 ~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~g----~~p~~i~~~~~~~GKP~l~~~~~~~~~~~~l~ 136 (329)
+.++|+++|++++.++. ++++.+|+++|.++|+++.+. .+.| +++.++.+..+++|||++..... ....++
T Consensus 26 ~~r~~t~~E~~~~~~~~-~~~~~~~la~rwaaKEA~~Ka-lg~g~~~~~~~~~i~i~~~~~G~P~l~~~~~---~~~~~~ 100 (121)
T 1f7l_A 26 AERILTRSELDQYYELS-EKRKNEFLAGRFAAKEAFSKA-FGTGIGRQLSFQDIEIRKDQNGKPYIICTKL---SPAAVH 100 (121)
T ss_dssp HHHHCCHHHHHHHTTSC-HHHHHHHHHHHHHHHHHHHHH-HTSCSBTTBCGGGCEEEECTTSCEEEEETTT---EEEEEE
T ss_pred HHHcCCHHHHHHHHccC-cccHHHHHHHHHHHHHHHHHH-hCCCCCCCcceEEEEEEECCCCCcEEEECcc---ccCcEE
Confidence 35689999999999887 578889999999999999887 3333 56789999999999999974210 013689
Q ss_pred EEeccCCCceeEEEe
Q 020190 137 FNISHTSSLVACGVT 151 (329)
Q Consensus 137 fSISHs~~~v~~avs 151 (329)
+||||+++|+++.+.
T Consensus 101 ~SiSH~~~~a~A~v~ 115 (121)
T 1f7l_A 101 VSITHTKEYAAAQVV 115 (121)
T ss_dssp EEEEECSSEEEEEEE
T ss_pred EEEeCCCCcEEEEEE
Confidence 999999999876554
No 16
>3f09_A Holo-[acyl-carrier-protein] synthase; structural genomics, I deseases, fatty acid biosynthesis, lipid synthesis; 1.82A {Staphylococcus aureus subsp} PDB: 4dxe_A
Probab=99.00 E-value=8.6e-10 Score=92.95 Aligned_cols=83 Identities=22% Similarity=0.312 Sum_probs=66.7
Q ss_pred HhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcCC----CCCCceeEecCCCCccEEeccCCCCCCCCCce
Q 020190 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ----VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLH 136 (329)
Q Consensus 61 ~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~g----~~p~~i~~~~~~~GKP~l~~~~~~~~~~~~l~ 136 (329)
+.++|+++|++.+.++..++++.+++++|.++|+++.+.+ +.| +.+.+|++.+++.|||++... ...++
T Consensus 50 ~~rift~~E~~~~~~~~~~~~~~~~lA~RwAaKEA~~KAl-G~G~~~~~~~~dIeI~~d~~GkP~l~l~------g~~~~ 122 (143)
T 3f09_A 50 VERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKAL-GTGLGKHVAFNDIDCYNDELGKPKIDYE------GFIVH 122 (143)
T ss_dssp HHHHSCHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHH-C------CCGGGCCEEEC--CCEEECCT------TEEEE
T ss_pred HHHhCCHHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHh-ccCcccCcCcceEEEEECCCCCeEEEEc------CCcEE
Confidence 3468999999999998878888999999999999998873 333 678999999999999999842 14689
Q ss_pred EEeccCCCceeEEE
Q 020190 137 FNISHTSSLVACGV 150 (329)
Q Consensus 137 fSISHs~~~v~~av 150 (329)
+||||+++|+++.+
T Consensus 123 vSISH~~~yAvA~v 136 (143)
T 3f09_A 123 VSISHTEHYAMSQV 136 (143)
T ss_dssp EEEEECSSEEEEEE
T ss_pred EEEECCCCEEEEEE
Confidence 99999999986544
No 17
>3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} SCOP: d.150.1.0
Probab=98.76 E-value=3.2e-08 Score=81.04 Aligned_cols=82 Identities=13% Similarity=0.182 Sum_probs=65.9
Q ss_pred HhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcCC----CCCCceeEecCCCCccEEeccCCCCCCCCCce
Q 020190 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ----VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLH 136 (329)
Q Consensus 61 ~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~g----~~p~~i~~~~~~~GKP~l~~~~~~~~~~~~l~ 136 (329)
+.++++++|++.+.... +.++.+++++|..+|+++...+ +.| +.+.++++.+++.|||++... ....++
T Consensus 29 ~~r~ft~~E~~~~~~~~-~~~~~~~la~rwaaKEA~~KAl-g~G~~~~~~~~dieI~~~~~G~P~v~l~-----~~~~~~ 101 (122)
T 3hyk_A 29 MERILTENERNVAKGLK-GSRLTEFVAGRFAAKEAYSKAV-GTGIGKEVSFLDIEVRNDDRGKPILITS-----TEHIVH 101 (122)
T ss_dssp HHHHSCHHHHHHHTTCC-THHHHHHHHHHHHHHHHHHHHH-TSCSSSSCCGGGCEEEECTTSCEEEECS-----CSSEEE
T ss_pred HHHcCCHHHHHHHHhCC-cchHHHHHHHHHHHHHHHHHHh-ccCccCCcCceEEEEEECCCCCeEEEEc-----CCCCEE
Confidence 34689999999988765 4677899999999999988773 332 667899999999999999743 125789
Q ss_pred EEeccCCCceeEE
Q 020190 137 FNISHTSSLVACG 149 (329)
Q Consensus 137 fSISHs~~~v~~a 149 (329)
+||||+++|++..
T Consensus 102 vSISH~~~~A~A~ 114 (122)
T 3hyk_A 102 LSISHSKEFAVAQ 114 (122)
T ss_dssp EEEEECSSEEEEE
T ss_pred EEEECCCCEEEEE
Confidence 9999999997533
No 18
>1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A*
Probab=98.71 E-value=5.7e-08 Score=79.10 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=67.0
Q ss_pred HhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcCC---CCCCceeEecCCCCccEEeccCCCCCCCCCceE
Q 020190 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ---VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLHF 137 (329)
Q Consensus 61 ~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~g---~~p~~i~~~~~~~GKP~l~~~~~~~~~~~~l~f 137 (329)
...+++++|++.+.+.. +.+|.+++++|..+|+++... .|.| +++.++.+..+++|+|++.... ....+++
T Consensus 28 ~~r~~t~~E~~~~~~~~-~~~~~~~~a~rwaaKEA~~Ka-lG~gl~~~~~~~i~i~~~~~g~P~l~~~~----~~~~~~~ 101 (122)
T 1fth_A 28 AKRVLTALEMERFTSLK-GRRQIEYLAGRWSAKEAFSKA-MGTGISKLGFQDLEVLNNERGAPYFSQAP----FSGKIWL 101 (122)
T ss_dssp HHHHSCHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHH-HTSCSSSSCGGGCEEEECTTSCEEEEECS----CCSEEEE
T ss_pred HHHcCCHHHHHHHHcCC-cchHHHHHHHHHHHHHHHHHH-hCCCccccccceEEEecCCCCCeEEEecC----CCCeEEE
Confidence 34689999999998865 567889999999999999887 3444 5678999999999999997431 1236899
Q ss_pred EeccCCCceeEE
Q 020190 138 NISHTSSLVACG 149 (329)
Q Consensus 138 SISHs~~~v~~a 149 (329)
||||+++|+++.
T Consensus 102 Sish~~~ya~A~ 113 (122)
T 1fth_A 102 SISHTDQFVTAS 113 (122)
T ss_dssp EEEECSSEEEEE
T ss_pred EEECCCCCEEEE
Confidence 999999998633
No 19
>3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* 4hc6_A
Probab=98.63 E-value=6.6e-08 Score=79.93 Aligned_cols=84 Identities=15% Similarity=0.263 Sum_probs=63.9
Q ss_pred hccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcCC----------CCCCceeEecCCCCccEEeccCCCC--
Q 020190 62 SELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ----------VNPRSLKFKKTIYGKPEVDWENGDK-- 129 (329)
Q Consensus 62 ~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~g----------~~p~~i~~~~~~~GKP~l~~~~~~~-- 129 (329)
.++|+++|++.+... +.++.+++++|..+|+++... .+.| +.+.+|++.+++.|||++.......
T Consensus 27 ~r~ft~~E~~~~~~~--~~~~~~~la~rwAaKEA~~KA-lg~g~~g~~~~~~~~~~~dIeI~~~~~G~P~v~l~g~~~~~ 103 (129)
T 3gwm_A 27 AETFTPGERRDAADK--SSSAARHLAARWAAKEAVIKA-WSSSRFSKRPALPEGIHRDIEVVTDMWGRPKVRLSGEIAKH 103 (129)
T ss_dssp HTTSCHHHHHHHTST--TSHHHHHHHHHHHHHHHHHHH-HHTSTTCCSSSCCTTHHHHEEEEECTTSCEEEEECHHHHHH
T ss_pred HhhCCHHHHHHHHhC--chhHHHHHHHHHHHHHHHHHH-hccCccccccccCccceeEEEEEECCCCCeEEEECHHHHHh
Confidence 389999999998762 456789999999999998887 3444 3368999999999999998421000
Q ss_pred CCCCCceEEeccCCCceeE
Q 020190 130 WCPPPLHFNISHTSSLVAC 148 (329)
Q Consensus 130 ~~~~~l~fSISHs~~~v~~ 148 (329)
.....+++||||+++|++.
T Consensus 104 ~~~~~~~vSISH~~~~A~A 122 (129)
T 3gwm_A 104 LEDVTIHVSLTHEDQTAAA 122 (129)
T ss_dssp TTTCEEEEEEEEETTEEEE
T ss_pred cCCCcEEEEEeCCCCEEEE
Confidence 0024689999999999753
No 20
>3ota_A Holo-[acyl-carrier-protein] synthase; structural genomics, center for structural genomics of infec diseases, csgid; HET: COA; 1.85A {Vibrio cholerae o1 biovar el tor} PDB: 3qmn_A*
Probab=98.61 E-value=9.3e-08 Score=79.05 Aligned_cols=83 Identities=13% Similarity=0.165 Sum_probs=64.2
Q ss_pred hccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcC----CCCCCceeEecCCCCccEEeccCC-----CCCCC
Q 020190 62 SELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC----QVNPRSLKFKKTIYGKPEVDWENG-----DKWCP 132 (329)
Q Consensus 62 ~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~----g~~p~~i~~~~~~~GKP~l~~~~~-----~~~~~ 132 (329)
.++|++.|++.+.+.+ ++.++|++|..+|+++...+ |. |+.+.+|++.+++.|||++..... ...+.
T Consensus 31 ~Rift~~E~~~~~~~~---~~~~~lA~RfAAKEA~~KAl-Gtg~~~~~~~~dIeI~~d~~GkP~v~l~g~~~~~~~~~~~ 106 (129)
T 3ota_A 31 RRILTDSELEQFHASK---QQGRFLAKRFAAKEAASKAL-GTGIAQGVTFHDFTISHDKLGKPLLILSGQAAELASQLQV 106 (129)
T ss_dssp HHHSCHHHHHHHHHCS---CHHHHHHHHHHHHHHHHHHH-TSCSCTTCCGGGEEEEECTTCCEEEEECHHHHHHHHHTTC
T ss_pred HHCCCHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHh-cccCCCCCCceEEEEEECCCCCceEEeChHHHHHHHHcCC
Confidence 4689999999887754 45689999999999998884 33 467899999999999999963210 00123
Q ss_pred CCceEEeccCCCceeE
Q 020190 133 PPLHFNISHTSSLVAC 148 (329)
Q Consensus 133 ~~l~fSISHs~~~v~~ 148 (329)
..+++||||+++|++.
T Consensus 107 ~~i~lSiSh~~~~AiA 122 (129)
T 3ota_A 107 ENIHLSISDERHYAMA 122 (129)
T ss_dssp CEEEEEEEECSSEEEE
T ss_pred CeEEEEEeCCCCeEEE
Confidence 4689999999999753
No 21
>3h88_A Holo-[acyl-carrier-protein] synthase; alpha-beta structure, structural genomics of infectious diseases, cytoplasm, fatty acid biosynthesis; HET: COA; 1.85A {Vibrio cholerae} PDB: 3ota_A* 3qmn_A*
Probab=98.54 E-value=1.3e-07 Score=78.07 Aligned_cols=84 Identities=13% Similarity=0.151 Sum_probs=64.3
Q ss_pred HhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcC----CCCCCceeEecCCCCccEEeccCCC-----CCC
Q 020190 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC----QVNPRSLKFKKTIYGKPEVDWENGD-----KWC 131 (329)
Q Consensus 61 ~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~----g~~p~~i~~~~~~~GKP~l~~~~~~-----~~~ 131 (329)
+.++|+++|++.+.... ++.+++++|..+|+++...+ +. ++.+.+|++.+++.|||++...... ..+
T Consensus 30 ~~r~ft~~E~~~~~~~~---~~~~~la~rwaaKEA~~KAl-g~g~~~~~~~~dieI~~~~~G~P~~~l~g~~~~~~~~~g 105 (129)
T 3h88_A 30 ARRILTDSELEQFHASK---QQGRFLAKRFAAKEAASKAL-GTGIAQGVTFHDFTISHDKLGKPLLILSGQAAELASQLQ 105 (129)
T ss_dssp HHHHSCHHHHHHHHHCS---CHHHHHHHHHHHHHHHHHHT-TSCSCTTCCGGGEEEEECTTSCEEEEECHHHHHHHHHTT
T ss_pred HHHhCCHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHh-ccCccCCccceEEEEEECCCCCEEEEECHHHHHHHHHcC
Confidence 34699999999998764 36789999999999998873 33 3567999999999999999742100 011
Q ss_pred CCCceEEeccCCCceeE
Q 020190 132 PPPLHFNISHTSSLVAC 148 (329)
Q Consensus 132 ~~~l~fSISHs~~~v~~ 148 (329)
...+++||||+++|++.
T Consensus 106 ~~~~~vSISH~~~~A~A 122 (129)
T 3h88_A 106 VENIHLSISDERHYAMA 122 (129)
T ss_dssp CCEEEEEEEECSSEEEE
T ss_pred CCEEEEEEECCCCeEEE
Confidence 34689999999999753
No 22
>2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B
Probab=98.48 E-value=3.4e-07 Score=74.65 Aligned_cols=85 Identities=9% Similarity=0.096 Sum_probs=63.6
Q ss_pred HhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcC-----CCCCCceeEecCCCCccEEeccCCC-----CC
Q 020190 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC-----QVNPRSLKFKKTIYGKPEVDWENGD-----KW 130 (329)
Q Consensus 61 ~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~-----g~~p~~i~~~~~~~GKP~l~~~~~~-----~~ 130 (329)
+.++++++|++.+.+.. ++.+++++|..+|+++... .+. ++++.++++..++.|+|++...... ..
T Consensus 22 ~~r~ft~~E~~~~~~~~---~~~~~la~rwaaKEA~~KA-lg~g~~~~~~~~~~iei~~~~~G~P~l~l~g~~~~~~~~~ 97 (122)
T 2was_A 22 IERNFTPQEIEYCSAQP---SVQSSFAGTWSAKEAVFKS-LGVKSLGGGAALKDIEIVRVNKNAPAVELHGNAKKAAEEA 97 (122)
T ss_dssp HHHHSCHHHHHHHHTSS---SHHHHHHHHHHHHHHHHHH-HCC-------CCTTEEEEEETTEEEEEEECHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHcCC---cHHHHHHHHHHHHHHHHHH-hCCCccCCCCCCCEEEEEECCCCCeEEEEChHHHHHHHHc
Confidence 45789999999988754 3568999999999999887 333 2578999999999999998742100 00
Q ss_pred CCCCceEEeccCCCceeEE
Q 020190 131 CPPPLHFNISHTSSLVACG 149 (329)
Q Consensus 131 ~~~~l~fSISHs~~~v~~a 149 (329)
+...+++||||+++|+++.
T Consensus 98 ~~~~~~vSiSH~~~~A~A~ 116 (122)
T 2was_A 98 GVTDVKVSISHDDLQAVAV 116 (122)
T ss_dssp TCCEEEEEEEECSSEEEEE
T ss_pred CCCeEEEEEEcCCCcEEEE
Confidence 1246899999999998643
No 23
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=98.46 E-value=1.9e-08 Score=112.98 Aligned_cols=117 Identities=17% Similarity=0.222 Sum_probs=0.0
Q ss_pred ccccccchhhhhhhhhhhHHHHHHhcCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhcCCC-CC-CCCCceEEEEe
Q 020190 153 NVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRG-FS-AAPFNTFTIRA 230 (329)
Q Consensus 153 ~~~vGVDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~WtlKEA~~Ka~G~G-L~-~~~l~~~~~~~ 230 (329)
+..|||||+.+.+- ...-..+++++||+.|+++....+. +.+.|...|++|||+.||+|+| +. +..|++|+|..
T Consensus 1758 ~~GIGiDIveI~Ri-~~~~~~F~~RifT~~E~~~~~~~~~---~~~~lAgRfAAKEA~~KAlGtG~~~~g~~~~dIeI~~ 1833 (1878)
T 2uv9_A 1758 ASRVGVDVESVDSI-NIDNEEFISRNFTEREQAYCRRAPN---PRASFAGRWTAKEAIFKSLGVASKGAGAAMREIEVIN 1833 (1878)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeEEeeeeHHH-hhhhhHHHHHcCCHHHHHHHHhCcc---HHHHHHHHHHHHHHHHHHhccCcCCCCCCccEEEEEE
Confidence 46899999998863 2233578899999999999887542 3467788999999999999996 44 24789999987
Q ss_pred cCCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEe
Q 020190 231 RVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIE 284 (329)
Q Consensus 231 ~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~ 284 (329)
++.+.+.+.+.+...... . ......|++ ++..+.+|.+|+|+-
T Consensus 1834 d~~G~P~v~l~g~a~~~~-----~-----~~g~~~i~l-SISHd~~yA~A~vI~ 1876 (1878)
T 2uv9_A 1834 DANGAPEVHLHGAAAEAA-----K-----QAGVKTVNV-SISHGDLQAVAVAVS 1876 (1878)
T ss_dssp ------------------------------------------------------
T ss_pred CCCCCeEEEECHHHHHHH-----H-----HcCCCeEEE-EEecCCCeEEEEEEE
Confidence 776666666543211000 0 011234444 567788999998864
No 24
>2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii}
Probab=98.42 E-value=4.5e-07 Score=77.86 Aligned_cols=87 Identities=14% Similarity=0.158 Sum_probs=61.0
Q ss_pred hccCCHHHHHHHhcCCCH-----------HHHHHHHHHHHHHHHHHHhhhhcCC--------CCCCceeEecCCCCccEE
Q 020190 62 SELLSPREKKNLYHMQGD-----------QFKKSALLARVLVRTTIARYQTNCQ--------VNPRSLKFKKTIYGKPEV 122 (329)
Q Consensus 62 ~~~Ls~~Er~r~~r~~~~-----------~dr~~~L~~R~llr~~L~~~~~~~g--------~~p~~i~~~~~~~GKP~l 122 (329)
.++|++.|++.+.+...+ .++.+|+++|..+|+++...+ +.| +++.+|++..++.|||++
T Consensus 30 ~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~lAgRfAAKEA~~KAl-GtGi~~~~~~~~~~~dIeI~~d~~G~P~v 108 (163)
T 2qg8_A 30 KKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSM-GRGLSSISKYGLSMNDIEIKNDKYGKPHV 108 (163)
T ss_dssp HHHSCHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC-----CBCGGGEEEEECTTSCEEE
T ss_pred HhcCCHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHHHh-cCCCcccccCCccccEEEEEECCCCCEEE
Confidence 468999999999876543 135689999999999999873 333 457899999999999998
Q ss_pred eccCCC-----CCCCCCceEEeccCCCceeEE
Q 020190 123 DWENGD-----KWCPPPLHFNISHTSSLVACG 149 (329)
Q Consensus 123 ~~~~~~-----~~~~~~l~fSISHs~~~v~~a 149 (329)
...... ..+...+++||||+++|++..
T Consensus 109 ~l~g~a~~~~~~~g~~~i~lSISHd~~~avA~ 140 (163)
T 2qg8_A 109 YLYGKAKKVAYEMGIVKIFLSISDEKIINSQT 140 (163)
T ss_dssp EECHHHHHHHHHTTCCEEEEEEEEEEC-----
T ss_pred EEChHHHHHHHHcCCCEEEEEEECCCCcEEEE
Confidence 631100 012347899999999997543
No 25
>2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii}
Probab=98.36 E-value=5.7e-07 Score=78.54 Aligned_cols=89 Identities=13% Similarity=0.143 Sum_probs=59.7
Q ss_pred HhccCCHHHHHHHhcCCCH-----------HHHHHHHHHHHHHHHHHHhhhhcCC--------CCCCceeEecCCCCccE
Q 020190 61 YSELLSPREKKNLYHMQGD-----------QFKKSALLARVLVRTTIARYQTNCQ--------VNPRSLKFKKTIYGKPE 121 (329)
Q Consensus 61 ~~~~Ls~~Er~r~~r~~~~-----------~dr~~~L~~R~llr~~L~~~~~~~g--------~~p~~i~~~~~~~GKP~ 121 (329)
+.++|++.|++.+.+...+ +++.+|+++|..+|+++...+ |.| +.+.+|++..++.|||+
T Consensus 48 ~~RifT~~E~~~~~~~~~~~~~~~~~~~~~~~~a~~lAgRfAAKEAv~KAl-GtGi~~~~~~g~~~~dIEI~~d~~GkP~ 126 (182)
T 2bdd_A 48 IKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSM-GRGLSSISKYGLSMNDIEIKNDKYGKPH 126 (182)
T ss_dssp HHHHSCHHHHHHHHTC-----------CHHHHHHHHHHHHHHHHHHHHHHT-TC---------CCGGGEEEEECTTSCEE
T ss_pred HHhhCCHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcCcCEEEEEECCCCCEE
Confidence 3468999999999876543 245789999999999998873 333 45789999999999999
Q ss_pred EeccCCC-----CCCCCCceEEeccCCCceeEEE
Q 020190 122 VDWENGD-----KWCPPPLHFNISHTSSLVACGV 150 (329)
Q Consensus 122 l~~~~~~-----~~~~~~l~fSISHs~~~v~~av 150 (329)
+...... ..+...+++||||+++|++..|
T Consensus 127 v~L~g~a~~~~~~~gi~~i~lSISHd~~yavA~V 160 (182)
T 2bdd_A 127 VYLYGKAKKVAYEMGIVKIFLSISDEKIINSQTN 160 (182)
T ss_dssp EEECHHHHHHHHHHTCCEEEEEEEEEC-------
T ss_pred EEECHHHHHHHHHcCCCEEEEEEECCCCcEEEEE
Confidence 8642100 0012478999999999986443
No 26
>3nfd_A Phosphopantetheine protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A*
Probab=98.33 E-value=6.2e-07 Score=76.22 Aligned_cols=87 Identities=13% Similarity=0.146 Sum_probs=61.5
Q ss_pred hccCCHHHHHHHhcCCCH----------HHHHHHHHHHHHHHHHHHhhh-hc----------CCCCCCceeEecCCCCcc
Q 020190 62 SELLSPREKKNLYHMQGD----------QFKKSALLARVLVRTTIARYQ-TN----------CQVNPRSLKFKKTIYGKP 120 (329)
Q Consensus 62 ~~~Ls~~Er~r~~r~~~~----------~dr~~~L~~R~llr~~L~~~~-~~----------~g~~p~~i~~~~~~~GKP 120 (329)
.++|++.|++.+...... .++.+|+++|..+|+++...+ ++ .++.+.+|++.+++.|||
T Consensus 32 ~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~lAgrfAAKEA~~KAlg~g~~g~~~~~~~~~~~~~dIeI~~d~~G~P 111 (153)
T 3nfd_A 32 EQVFSPLERRHAQTRRSAAADATNSSLAGSRTEHLAGRWAAKEAFIKAWSQAIYGKPPVIEPDLVNFAEIEVLPDRWGRV 111 (153)
T ss_dssp GGSSCHHHHHHHHCC------------CCTTHHHHHHHHHHHHHHHHHHHHHTTTSCCSSCGGGCCGGGEEEEECTTSCE
T ss_pred HhhCCHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHhccccccccccccccCCcceEEEEEECCCCCe
Confidence 478999999988775442 136789999999999988774 11 246778999999999999
Q ss_pred EEeccCCCC--CCCCCceE----EeccCCCceeE
Q 020190 121 EVDWENGDK--WCPPPLHF----NISHTSSLVAC 148 (329)
Q Consensus 121 ~l~~~~~~~--~~~~~l~f----SISHs~~~v~~ 148 (329)
++....... .+...+++ ||||+++|++.
T Consensus 112 ~v~l~g~~~~~~~~~~~~v~~~lSISHd~~~AvA 145 (153)
T 3nfd_A 112 ALQLKGEVAAKLQESIGDVELALSISHDGDYATA 145 (153)
T ss_dssp EEEECHHHHHHHHHHHCSEEEEEEEEEETTEEEE
T ss_pred EEEECHHHHHHcCCceEEECCceEecCCCCEEEE
Confidence 997421000 00013566 99999999753
No 27
>2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A*
Probab=98.32 E-value=1.8e-07 Score=78.66 Aligned_cols=85 Identities=12% Similarity=0.046 Sum_probs=62.1
Q ss_pred hccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhh-hcCCCCCCceeEecCCCCccEEeccCCC-----CCCCCCc
Q 020190 62 SELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQ-TNCQVNPRSLKFKKTIYGKPEVDWENGD-----KWCPPPL 135 (329)
Q Consensus 62 ~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~-~~~g~~p~~i~~~~~~~GKP~l~~~~~~-----~~~~~~l 135 (329)
.++|++.|++.+... .++.+++++|..+|+++.+.+ ++.++.+.+|++..++.|||++...... ..+...+
T Consensus 48 ~rift~~E~~~~~~~---~~~~~~lAgRfAAKEAv~KAlG~G~~~~~~dieI~~~~~G~P~v~l~g~~~~~~~~~g~~~~ 124 (143)
T 2wds_A 48 GRLFLESELLLPGGE---RRGVASLAARFAAKEALAKALGAPAGLLWTDAEVWVEAGGRPRLRVTGTVAARAAELGVASW 124 (143)
T ss_dssp HHHCCGGGGBCTTSS---BCCHHHHHHHHHHHHHHHHHTTCCTTCCGGGEEEEECTTSCEEEEECHHHHHHHHHHTCCEE
T ss_pred HhcCCHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHhCCCCCCCceEEEEEeCCCCCcEEEEChHHHHHHHhcCCCeE
Confidence 468999999776553 345789999999999999873 1224567999999999999998531100 0012368
Q ss_pred eEEeccCCCceeEE
Q 020190 136 HFNISHTSSLVACG 149 (329)
Q Consensus 136 ~fSISHs~~~v~~a 149 (329)
++||||+++|+++.
T Consensus 125 ~vSISH~~~~AvA~ 138 (143)
T 2wds_A 125 HVSLSADAGIASAV 138 (143)
T ss_dssp EEEEEEETTEEEEE
T ss_pred EEEEECCCCcEEEE
Confidence 99999999998543
No 28
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=98.24 E-value=1.3e-07 Score=106.49 Aligned_cols=117 Identities=20% Similarity=0.259 Sum_probs=0.0
Q ss_pred ccccccchhhhhhhhhhhHHHHHHhcCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhcCCC-CC-CCCCceEEEEe
Q 020190 153 NVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRG-FS-AAPFNTFTIRA 230 (329)
Q Consensus 153 ~~~vGVDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~WtlKEA~~Ka~G~G-L~-~~~l~~~~~~~ 230 (329)
+..|||||..+.+- ...-..+++++||+.|+++..+.. .+.+.|...|++|||+.||+|+| +. +..+++++|..
T Consensus 1766 ~~GIGiDIveI~Ri-~~~~~~F~~RifT~~E~~~~~~~~---~~~~~lAgRfAAKEA~~KAlGtgg~~~~~~~~dIeI~~ 1841 (1887)
T 2uv8_A 1766 NGGVGVDVELITSI-NVENDTFIERNFTPQEIEYCSAQP---SVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVR 1841 (1887)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeeeeeecHHH-hhhchHHHHHcCCHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHhCcCcCCCCCCccEEEEEE
Confidence 45899999988763 223357889999999999887643 23456677999999999999994 43 24689999987
Q ss_pred cCCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEEEEe
Q 020190 231 RVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIE 284 (329)
Q Consensus 231 ~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Ava~~ 284 (329)
++.+.+.+.+.+...... . ......|++ ++..+.+|.+|+|+-
T Consensus 1842 ~~~G~P~v~l~g~~~~~~-----~-----~~g~~~i~l-SISH~~~~A~A~vi~ 1884 (1887)
T 2uv8_A 1842 VNKNAPAVELHGNAKKAA-----E-----EAGVTDVKV-SISHDDLQAVAVAVS 1884 (1887)
T ss_dssp ------------------------------------------------------
T ss_pred CCCCCeEEEECHHHHHHH-----H-----HcCCCEEEE-EEECCCCcEEEEEEE
Confidence 766666676644211000 0 011234554 567788899998874
No 29
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1
Probab=97.27 E-value=0.0019 Score=57.73 Aligned_cols=87 Identities=7% Similarity=0.055 Sum_probs=66.3
Q ss_pred HHHhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcCC--CCCCceeEecCCCCccEEeccCCCCCCCCCce
Q 020190 59 SQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ--VNPRSLKFKKTIYGKPEVDWENGDKWCPPPLH 136 (329)
Q Consensus 59 ~~~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~g--~~p~~i~~~~~~~GKP~l~~~~~~~~~~~~l~ 136 (329)
.-+..+++++|++.+.+.. ..++.+++..+..+|+++.+. .|.| .++.++.+..++.|+|++..+. ....++
T Consensus 117 ~~~~~~~t~~E~~~l~~~~-~~~~~~~~~~~wt~KEA~~Ka-~G~gl~~~~~~~~i~~~~~g~~~~~~~~----~~~~~~ 190 (228)
T 1qr0_A 117 EIAKRFFSKTEYSDLLAKD-KDEQTDYFYHLWSMKESFIKQ-EGKGLSLPLDSFSVRLHQDGQVSIELPD----SHSPCY 190 (228)
T ss_dssp HHHSSSSCHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHHHH-HCSTTSCCSSCCEEEECGGGCEEEECSC----TTSCCE
T ss_pred HHHHHhCCHHHHHHHHhCC-hhhHHHHHHHHHHHHHHHHHH-hCCCCCCCCceEEEeeCCCCCeEEecCC----CCCCeE
Confidence 4456799999999988753 356778899999999999887 3444 5678899999999999997532 123465
Q ss_pred E-EeccCCCceeEEEe
Q 020190 137 F-NISHTSSLVACGVT 151 (329)
Q Consensus 137 f-SISHs~~~v~~avs 151 (329)
| ++||+++|++..+.
T Consensus 191 ~~s~~~~~~y~~Av~~ 206 (228)
T 1qr0_A 191 IKTYEVDPGYKMAVCA 206 (228)
T ss_dssp EEEECSCTTEEEEEEE
T ss_pred EEEEecCCCEEEEEEE
Confidence 5 99999999754444
No 30
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=96.81 E-value=0.00019 Score=81.16 Aligned_cols=83 Identities=11% Similarity=0.116 Sum_probs=0.0
Q ss_pred HhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcC-----CCCCCceeEecCCCCccEEeccCCCC-----C
Q 020190 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC-----QVNPRSLKFKKTIYGKPEVDWENGDK-----W 130 (329)
Q Consensus 61 ~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~-----g~~p~~i~~~~~~~GKP~l~~~~~~~-----~ 130 (329)
+.++|++.|++.+.+. .++.+++++|..+|+++.+.+ +. ++.+.+|+|.+++.|||++....... .
T Consensus 1787 ~~RifT~~E~~~~~~~---~~~~~~lAgRfAAKEA~~KAl-Gtgg~~~~~~~~dIeI~~~~~G~P~v~l~g~~~~~~~~~ 1862 (1887)
T 2uv8_A 1787 IERNFTPQEIEYCSAQ---PSVQSSFAGTWSAKEAVFKSL-GVKSLGGGAALKDIEIVRVNKNAPAVELHGNAKKAAEEA 1862 (1887)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHcCCHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHh-CcCcCCCCCCccEEEEEECCCCCeEEEECHHHHHHHHHc
Confidence 3478999999887653 456789999999999998873 22 36789999999999999986432100 1
Q ss_pred CCCCceEEeccCCCcee
Q 020190 131 CPPPLHFNISHTSSLVA 147 (329)
Q Consensus 131 ~~~~l~fSISHs~~~v~ 147 (329)
+...+++||||+++|++
T Consensus 1863 g~~~i~lSISH~~~~A~ 1879 (1887)
T 2uv8_A 1863 GVTDVKVSISHDDLQAV 1879 (1887)
T ss_dssp -----------------
T ss_pred CCCEEEEEEECCCCcEE
Confidence 12368999999999975
No 31
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=96.69 E-value=0.00027 Score=79.93 Aligned_cols=83 Identities=16% Similarity=0.168 Sum_probs=0.0
Q ss_pred HhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcC-----CCCCCceeEecCCCCccEEeccCCCC-----C
Q 020190 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC-----QVNPRSLKFKKTIYGKPEVDWENGDK-----W 130 (329)
Q Consensus 61 ~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~-----g~~p~~i~~~~~~~GKP~l~~~~~~~-----~ 130 (329)
+.++|++.|++.+.+. .++.+++++|..+|+++.+.+ |. ++.+.+|+|.+++.|||++....... .
T Consensus 1779 ~~RifT~~E~~~~~~~---~~~~~~lAgRfAAKEA~~KAl-GtG~~~~g~~~~dIeI~~d~~G~P~v~l~g~a~~~~~~~ 1854 (1878)
T 2uv9_A 1779 ISRNFTEREQAYCRRA---PNPRASFAGRWTAKEAIFKSL-GVASKGAGAAMREIEVINDANGAPEVHLHGAAAEAAKQA 1854 (1878)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHcCCHHHHHHHHhC---ccHHHHHHHHHHHHHHHHHHh-ccCcCCCCCCccEEEEEECCCCCeEEEECHHHHHHHHHc
Confidence 3478999999887664 355789999999999988873 33 35788999999999999986432110 1
Q ss_pred CCCCceEEeccCCCcee
Q 020190 131 CPPPLHFNISHTSSLVA 147 (329)
Q Consensus 131 ~~~~l~fSISHs~~~v~ 147 (329)
+...+++||||+++|++
T Consensus 1855 g~~~i~lSISHd~~yA~ 1871 (1878)
T 2uv9_A 1855 GVKTVNVSISHGDLQAV 1871 (1878)
T ss_dssp -----------------
T ss_pred CCCeEEEEEecCCCeEE
Confidence 12367999999999985
No 32
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A*
Probab=95.63 E-value=0.063 Score=50.47 Aligned_cols=86 Identities=7% Similarity=0.057 Sum_probs=63.0
Q ss_pred HHHhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcCC--CCCCceeEecC----CCCccEEec---cCCCC
Q 020190 59 SQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQ--VNPRSLKFKKT----IYGKPEVDW---ENGDK 129 (329)
Q Consensus 59 ~~~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~g--~~p~~i~~~~~----~~GKP~l~~---~~~~~ 129 (329)
..+..++++.|++.+.....+..+.+++..+..+|+++.+. .|.| .++.++.|..+ +.|+|+... -++
T Consensus 156 ~~~~r~ft~~E~~~l~~~~~~~~~~~~f~~~WtaKEA~~KA-~G~Gl~~~l~~iev~~~p~~~~~g~p~~~~~v~l~g-- 232 (323)
T 2c43_A 156 HIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKA-IGVGLGFELQRLEFDLSPLNLDIGQVYKETRLFLDG-- 232 (323)
T ss_dssp HHTGGGSCHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHH-HTCCSCCCGGGEEEECCSSCCCTTCCBCCCEEEETT--
T ss_pred HHHHHhCCHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHh-cCCCCCCCCCeEEEEeCccccccCCceecceeeecC--
Confidence 33456999999999988766667788999999999998887 3444 56788999888 689997420 000
Q ss_pred CCCCCceE-EeccCCCcee
Q 020190 130 WCPPPLHF-NISHTSSLVA 147 (329)
Q Consensus 130 ~~~~~l~f-SISHs~~~v~ 147 (329)
.....+.| +++|.++|++
T Consensus 233 ~~~~~w~~~~~~~~~~y~~ 251 (323)
T 2c43_A 233 EEEKEWAFEESKIDEHHFV 251 (323)
T ss_dssp EECTTEEEEEEEEETTEEE
T ss_pred CCCCCeEEEEEecCCCcEE
Confidence 01246777 7899999875
No 33
>2z0r_A Putative uncharacterized protein TTHA0547; alpha/beta protein, structural genomics, unknown function; 2.30A {Thermus thermophilus}
Probab=65.08 E-value=1.8 Score=33.53 Aligned_cols=17 Identities=41% Similarity=0.605 Sum_probs=13.9
Q ss_pred HHHHHHHHHhhcCC-CCC
Q 020190 203 LWTLKEAYVKAVGR-GFS 219 (329)
Q Consensus 203 ~WtlKEA~~Ka~G~-GL~ 219 (329)
=|++||+|+||+|. |..
T Consensus 58 ~w~lKE~~l~Al~~lgv~ 75 (103)
T 2z0r_A 58 SRALKEAYLRALGMLQVE 75 (103)
T ss_dssp SHHHHHHHHHHHHHTTCC
T ss_pred hhHHHHHHHHHHHHcCCc
Confidence 39999999999874 554
No 34
>1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A
Probab=37.73 E-value=6.1 Score=37.25 Aligned_cols=32 Identities=28% Similarity=0.269 Sum_probs=27.0
Q ss_pred CCceEEeccCCCceeEEEecccccccchhhhhh
Q 020190 133 PPLHFNISHTSSLVACGVTVNVPIGIDVEEKQR 165 (329)
Q Consensus 133 ~~l~fSISHs~~~v~~avs~~~~vGVDIE~~~~ 165 (329)
..+.++++|.++.+.+.|+ +.-.|||-|.+.+
T Consensus 138 g~I~i~~~~~~~~v~i~V~-D~G~Gi~~~~~~~ 169 (379)
T 1b3q_A 138 GTLILSARHEGNNVVIEVE-DDGRGIDKEKIIR 169 (379)
T ss_dssp EEEEEEEEEETTEEEEEEE-ECSCCCCHHHHHH
T ss_pred cEEEEEEEEeCCEEEEEEE-ECCCCCCHHHHHH
Confidence 3678899999999999999 6778999998753
No 35
>3kat_A Nacht, LRR and PYD domains-containing protein 1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 3.10A {Homo sapiens}
Probab=24.06 E-value=69 Score=24.76 Aligned_cols=42 Identities=17% Similarity=0.201 Sum_probs=30.1
Q ss_pred HHHHhcCCHHHHHHHHcCCChhHHHHHHHHH-----HHHHHHHHhhc
Q 020190 173 AFAKRYFSPDEVKLLTAISDPEIQRQELIKL-----WTLKEAYVKAV 214 (329)
Q Consensus 173 ~l~~~~fs~~E~~~l~~~~~~~~~~~~f~~~-----WtlKEA~~Ka~ 214 (329)
.+...+++.+|++.|++.+....+.+.++.+ +++|+.+++++
T Consensus 42 ~Ll~~VLteee~e~I~ae~T~q~k~R~Lld~v~~kG~~A~~~F~~~L 88 (107)
T 3kat_A 42 KLHGQVLSQEQYERVLAENTRPSQMRKLFSLSQSWDRKCKDGLYQAL 88 (107)
T ss_dssp HHTTTTSCHHHHHHHHHCCSHHHHHHHHHHGGGGCCTTHHHHHHHHH
T ss_pred HHHHhhCCHHHHHHHHhCCCCHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 4445699999999999887666666666652 45667776664
Done!