BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 020193
         (329 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3KCP|A Chain A, Crystal Structure Of Interacting Clostridium Thermocellum
           Multimodular Components
 pdb|4FL4|C Chain C, Scaffoldin Conformation And Dynamics Revealed By A Ternary
           Complex From The Clostridium Thermocellum Cellulosome
 pdb|4FL4|F Chain F, Scaffoldin Conformation And Dynamics Revealed By A Ternary
           Complex From The Clostridium Thermocellum Cellulosome
 pdb|4FL4|I Chain I, Scaffoldin Conformation And Dynamics Revealed By A Ternary
           Complex From The Clostridium Thermocellum Cellulosome
 pdb|4FL4|L Chain L, Scaffoldin Conformation And Dynamics Revealed By A Ternary
           Complex From The Clostridium Thermocellum Cellulosome
          Length = 321

 Score = 33.5 bits (75), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 14/111 (12%)

Query: 132 LLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSG-EVEFCVEMYYSVCK----- 185
           L+N G L + K ++      G++L   +F++ +  + K+G +VE      Y+V       
Sbjct: 142 LINGGVLVTNKPVIEGYKVSGYILPDFSFDATVAPLVKAGFKVEIVGTELYAVTDANGYF 201

Query: 186 --LGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
              G+ A+ S Y + I   S+A  +D   R++ N+V  G     +  API+
Sbjct: 202 EITGVPANASGYTLKI---SRATYLD---RVIANVVVTGDTSVSTSQAPIM 246


>pdb|3H0L|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0L|D Chain D, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0L|G Chain G, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0L|J Chain J, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0L|M Chain M, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0L|P Chain P, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0L|S Chain S, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0L|V Chain V, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0M|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0M|D Chain D, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0M|G Chain G, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0M|J Chain J, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0M|M Chain M, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0M|P Chain P, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0M|S Chain S, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0M|V Chain V, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0R|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0R|D Chain D, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0R|G Chain G, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0R|J Chain J, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0R|M Chain M, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0R|P Chain P, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0R|S Chain S, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
 pdb|3H0R|V Chain V, Structure Of Trna-Dependent Amidotransferase Gatcab From
           Aquifex Aeolicus
          Length = 478

 Score = 30.8 bits (68), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 11/110 (10%)

Query: 108 EFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLES---AKQMVNKMIKQGFVLDLETFNSLI 164
           E      D+GF P V+ R +L    L+AGY ++     Q V ++I   F+   E  + + 
Sbjct: 334 EMYARTRDEGFGPEVKRRIMLGTFALSAGYYDAYYLKAQKVRRLITNDFLKAFEEVDVIA 393

Query: 165 ETIC-----KSGE-VEFCVEMYYSVCKLGLCADVSTYK-ILIPAVSKAGM 207
                    K GE +E  +EMY S   L + A+++    I IP   K G+
Sbjct: 394 SPTTPTLPFKFGERLENPIEMYLSDI-LTVPANLAGLPAISIPIAWKDGL 442


>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
           And Isoquinolinedione Inhibitor
 pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
           And Isoquinolinedione Inhibitor
 pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
           And Isoquinolinedione Inhibitor
 pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
           And Isoquinolinedione Inhibitor
 pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
 pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
           And 3- Cyanoquinoline Inhibitor
          Length = 308

 Score = 29.3 bits (64), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 66  KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
           +L  G++ ++   + KG V D+    + +     +  MRE  EFL E S
Sbjct: 26  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74


>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
           Factor-1 Receptor Kinase Domain
 pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
           Factor-1 Receptor Kinase Domain
          Length = 322

 Score = 29.3 bits (64), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 66  KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
           +L  G++ ++   + KG V D+    + +     +  MRE  EFL E S
Sbjct: 32  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80


>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
           Kinase
          Length = 299

 Score = 29.3 bits (64), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 66  KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
           +L  G++ ++   + KG V D+    + +     +  MRE  EFL E S
Sbjct: 17  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65


>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
           (Igf-1r-Wt) Complex With Bms-754807
           [1-(4-((5-Cyclopropyl-
           1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
           4]triazin-2-Yl)-N-
           (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
          Length = 315

 Score = 29.3 bits (64), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 66  KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
           +L  G++ ++   + KG V D+    + +     +  MRE  EFL E S
Sbjct: 25  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73


>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
           Resolution.
 pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
           Resolution
          Length = 322

 Score = 29.3 bits (64), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 66  KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
           +L  G++ ++   + KG V D+    + +     +  MRE  EFL E S
Sbjct: 32  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80


>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
           Pyrimidine 8
 pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
           Pyrimidine 8
 pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
           Pyrimidine 8
 pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
           Pyrimidine 8
          Length = 301

 Score = 28.9 bits (63), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 66  KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
           +L  G++ ++   + KG V D+    + +     +  MRE  EFL E S
Sbjct: 19  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67


>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
           With An Hydantoin Inhibitor
          Length = 305

 Score = 28.9 bits (63), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 66  KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
           +L  G++ ++   + KG V D+    + +     +  MRE  EFL E S
Sbjct: 23  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71


>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
           Benzimidazole Inhibitor
 pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
           (Igf-1r-Wt) Complex With A Carbon-Linked Proline
           Isostere Inhibitor (11b)
 pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
           (Igf-1r-Wt) Complex With A Carbon-Linked Proline
           Isostere Inhibitor (11a)
 pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
           (Igf-1r-Wt) Complex With A Carbon-Linked Proline
           Isostere Inhibitor (34)
          Length = 307

 Score = 28.9 bits (63), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 66  KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
           +L  G++ ++   + KG V D+    + +     +  MRE  EFL E S
Sbjct: 25  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73


>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
           Receptor Kinase In Complex With Pqip
          Length = 301

 Score = 28.9 bits (63), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 66  KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
           +L  G++ ++   + KG V D+    + +     +  MRE  EFL E S
Sbjct: 19  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67


>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
 pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
 pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
          Length = 308

 Score = 28.9 bits (63), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 66  KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
           +L  G++ ++   + KG V D+    + +     +  MRE  EFL E S
Sbjct: 26  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74


>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
 pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
 pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
 pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
          Length = 304

 Score = 28.9 bits (63), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 66  KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
           +L  G++ ++   + KG V D+    + +     +  MRE  EFL E S
Sbjct: 22  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70


>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
           Domain (2p) In Complex With A Bis-Azaindole Inhibitor
 pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
           Domain (2p) In Complex With A Bis-Azaindole Inhibitor
 pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
           Domain (2p) In Complex With A Bis-Azaindole Inhibitor
 pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
           Domain (2p) In Complex With A Bis-Azaindole Inhibitor
          Length = 336

 Score = 28.9 bits (63), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 66  KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
           +L  G++ ++   + KG V D+    + +     +  MRE  EFL E S
Sbjct: 54  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102


>pdb|1LW7|A Chain A, Nadr Protein From Haemophilus Influenzae
          Length = 365

 Score = 28.9 bits (63), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 214 LLHNLVEDGHKPFPS---LYAPIIKGMFRRGQFDDAFCFFSEMKIKG 257
            +H+LVEDG   +P+    ++  +K +F    F+ +  F SE + K 
Sbjct: 77  FIHHLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKA 123


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.325    0.140    0.428 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,702,733
Number of Sequences: 62578
Number of extensions: 395094
Number of successful extensions: 1117
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1104
Number of HSP's gapped (non-prelim): 16
length of query: 329
length of database: 14,973,337
effective HSP length: 99
effective length of query: 230
effective length of database: 8,778,115
effective search space: 2018966450
effective search space used: 2018966450
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)