BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020193
(329 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94JX6|PP391_ARATH Pentatricopeptide repeat-containing protein At5g18390,
mitochondrial OS=Arabidopsis thaliana GN=At5g18390 PE=2
SV=2
Length = 459
Score = 527 bits (1357), Expect = e-149, Method: Compositional matrix adjust.
Identities = 249/330 (75%), Positives = 280/330 (84%), Gaps = 1/330 (0%)
Query: 1 MWKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKC-TAFNCQQCVLLYNSLL 59
MWK ++ MK +L +S +TL IIE++GK+G VD AVE+FN CQQ V +YNSLL
Sbjct: 130 MWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLL 189
Query: 60 FALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFN 119
ALC+VK+FHGAYALIRRMIRKG PDKRTYAILVN WCS+GKM+EAQEFL EMS +GFN
Sbjct: 190 HALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFN 249
Query: 120 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEM 179
PP RGRDLL++GLLNAGYLESAK+MV+KM K GFV D++TFN LIE I KSGEVEFC+EM
Sbjct: 250 PPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEM 309
Query: 180 YYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFR 239
YY+ CKLGLC D+ TYK LIPAVSK G IDEAFRLL+N VEDGHKPFPSLYAPIIKGM R
Sbjct: 310 YYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCR 369
Query: 240 RGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRC 299
G FDDAF FFS+MK+K HPPNRPVYTMLITMCGRGG+FV+AANYLVEMTEMGL PISRC
Sbjct: 370 NGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRC 429
Query: 300 FDLVTDGLKNCGKHDLAEKIELLEVSLRSV 329
FD+VTDGLKN GKHDLA +IE LEV LR V
Sbjct: 430 FDMVTDGLKNGGKHDLAMRIEQLEVQLRGV 459
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Query: 114 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEV 173
S+ + P + L + L + ES +++ +M + ET +IE K+G V
Sbjct: 103 SNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHV 162
Query: 174 EFCVEMYYSVCK-LGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAP 232
+ VE++ V K LG V Y L+ A+ M A+ L+ ++ G KP YA
Sbjct: 163 DQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAI 222
Query: 233 IIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMG 292
++ G G+ +A F EM +G P +LI G A + +MT+ G
Sbjct: 223 LVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGG 282
Query: 293 LTPISRCFDLVTDGLKNCGK 312
P + F+++ + + G+
Sbjct: 283 FVPDIQTFNILIEAISKSGE 302
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 144 bits (364), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 154/315 (48%), Gaps = 4/315 (1%)
Query: 15 VSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
VSP T +++I F G +D A+ +F+K C V+ YN+L+ C+++ +
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
L+R M KG P+ +Y +++N C G+M+E L EM+ +G++ + L++G
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
G A M +M++ G + T+ SLI ++CK+G + +E + GLC +
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSE 252
TY L+ S+ G ++EA+R+L + ++G P Y +I G G+ +DA +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 253 MKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK 312
MK KG P+ Y+ +++ R EA EM E G+ P + + + G C +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF--CEQ 498
Query: 313 HDLAEKIELLEVSLR 327
E +L E LR
Sbjct: 499 RRTKEACDLYEEMLR 513
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 131/267 (49%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
YN+L+ C+ FH A + M+R G P TY L+++ C +G M A EFL +M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
+G P R LV G GY+ A +++ +M GF + T+N+LI C +G++E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
+ + + + GL DV +Y ++ ++ +DEA R+ +VE G KP Y+ +I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
+G + + +A + EM G PP+ YT LI G +A EM E G+
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 295 PISRCFDLVTDGLKNCGKHDLAEKIEL 321
P + ++ +GL + A+++ L
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLL 579
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 132/286 (46%), Gaps = 2/286 (0%)
Query: 36 AVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVN 95
A VF + V YN L+ C A L +M KG +P+ TY L++
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 96 AWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVL 155
+C K+ + + L+ M+ KG P + ++++ GL G ++ ++ +M ++G+ L
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 156 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLL 215
D T+N+LI+ CK G + M+ + + GL V TY LI ++ KAG ++ A L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 216 HNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRG 275
+ G P Y ++ G ++G ++A+ EM G P+ Y LI
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 276 GRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEL 321
G+ +A L +M E GL+P + V G C +D+ E + +
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF--CRSYDVDEALRV 472
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 17/304 (5%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
++ M+ L + +T + +++ F + G ++ A V + V+ YN+L+ C
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 65 VKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG 124
A A++ M KG PD +Y+ +++ +C S + EA +EM +KG P
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
L+QG + A + +M++ G D T+ +LI C G++E ++++ +
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLL---------------HNLVED-GHKPFPS 228
+ G+ DV TY +LI ++K EA RLL H L+E+ + F S
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 229 LYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEM 288
+ + +IKG +G +A F M K H P+ Y ++I R G +A EM
Sbjct: 608 VVS-LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 289 TEMG 292
+ G
Sbjct: 667 VKSG 670
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 129/275 (46%)
Query: 14 SVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYA 73
S+ T + +I+ + K G A+ + + V+ Y SL+ ++C+ + A
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 74 LIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLL 133
+ +M +G P++RTY LV+ + G M EA L+EM+D GF+P V + L+ G
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 134 NAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVS 193
G +E A ++ M ++G D+ ++++++ C+S +V+ + + + + G+ D
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 194 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEM 253
TY LI + EA L ++ G P Y +I G + A +EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 254 KIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEM 288
KG P+ Y++LI + R EA L+++
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 128/306 (41%), Gaps = 23/306 (7%)
Query: 2 WKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFA 61
++ + M S S T + +I G +++A+ V V+ Y+++L
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 62 LCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPP 121
C A + R M+ KG PD TY+ L+ +C + +EA + +EM G P
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 122 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEV----EFCV 177
L+ G LE A Q+ N+M+++G + D+ T++ LI + K +
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 178 EMYYSVCKLGLCADVSTYKILIPAVSK---------------AGMIDEAFRLLHNLVEDG 222
+++Y + + +DV TY LI S GM+ EA ++ +++
Sbjct: 580 KLFY---EESVPSDV-TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 223 HKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAA 282
HKP + Y +I G R G A+ + EM G + L+ + G+ E
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695
Query: 283 NYLVEM 288
+ +V +
Sbjct: 696 SVIVHV 701
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 1/170 (0%)
Query: 126 DLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGE-VEFCVEMYYSVC 184
DL+V+ ++ A +V+ GF+ + ++N++++ +S + F ++ +
Sbjct: 138 DLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML 197
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
+ + +V TY ILI AG ID A L + G P Y +I G + + D
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 245 DAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
D F M +KG PN Y ++I R GR E + L EM G +
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 93/222 (41%), Gaps = 15/222 (6%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I + G ++ A+++ N+ V+ Y+ L+ L + A L+ ++
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 79 IRKGFVPDKRTYAILV---------------NAWCSSGKMREAQEFLQEMSDKGFNPPVR 123
+ VP TY L+ +C G M EA + + M K P
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGT 641
Query: 124 GRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSV 183
++++ G AG + A + +M+K GF+L T +L++ + K G+V + V
Sbjct: 642 AYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701
Query: 184 CKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKP 225
+ ++ K+L+ + G +D +L + +DG P
Sbjct: 702 LRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLP 743
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 137 bits (346), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 164/361 (45%), Gaps = 39/361 (10%)
Query: 1 MWKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLF 60
+W I M+ + SP+T +++ E + G D AV++F C Q + +N++L
Sbjct: 110 VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILD 169
Query: 61 ALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNP 120
LC+ K AY L R +R F D TY +++N WC + +A E L+EM ++G NP
Sbjct: 170 VLCKSKRVEKAYELFR-ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINP 228
Query: 121 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMY 180
+ + +++G AG + A + +M K+ +D+ T+ +++ +GE++ ++
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 181 YSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRR 240
+ + G+ V+TY +I + K ++ A + +V G++P + Y +I+G+F
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Query: 241 GQFDDAFCFFSEMKIKGHPPNRPVYTMLI---TMC-------------GRG--------- 275
G+F M+ +G PN Y M+I + C G G
Sbjct: 349 GEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTY 408
Query: 276 -----GRFVE--------AANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELL 322
G FV A L+EM E G P F+ V +GL G A++I L
Sbjct: 409 NILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRL 468
Query: 323 E 323
+
Sbjct: 469 Q 469
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 86/224 (38%), Gaps = 38/224 (16%)
Query: 2 WKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFA 61
W+ MK + + T + ++ FG G + A VF++ V YN+++
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 62 LCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPP 121
LC+ A + M+R+G+ P+ TY +L+ +G+ +E +Q M ++G P
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 122 VRGRDLLVQGLLNAGYLESAKQMVNKM--------------------------------- 148
+ +++++ +E A + KM
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGK 429
Query: 149 -----IKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
+++GF+ TFN ++ + +G F E+ K G
Sbjct: 430 LLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSG 473
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 149/305 (48%)
Query: 3 KTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFAL 62
K ++ M+ + T ++++ K G +D A++ N + CQ V+ +N +L ++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 63 CEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPV 122
C + A L+ M+RKGF P T+ IL+N C G + A + L++M G P
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 123 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYS 182
+ L+ G ++ A + + +M+ +G D+ T+N+++ +CK G+VE VE+
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 183 VCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQ 242
+ G + TY +I ++KAG +A +LL + KP Y+ ++ G+ R G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 243 FDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDL 302
D+A FF E + G PN + ++ + + A ++LV M G P + +
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 303 VTDGL 307
+ +GL
Sbjct: 560 LIEGL 564
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 149/301 (49%), Gaps = 3/301 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +++I + K G ++NA+ V ++ + V+ YN++L +LC+ A ++ RM
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+++ PD TY IL+ A C + A + L EM D+G P V ++LV G+ G L
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A + +N M G ++ T N ++ ++C +G ++ + + G V T+ IL
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + + G++ A +L + + G +P Y P++ G + + D A + M +G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
P+ Y ++T + G+ +A L +++ G +P+ ++ V DGL GK A K
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 319 I 319
+
Sbjct: 471 L 471
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 149/341 (43%), Gaps = 37/341 (10%)
Query: 13 LSVSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHG 70
+SVSP T + I+ G + A+EV ++ +C V+ Y L+ A C
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 71 AYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQ 130
A L+ M +G PD TY +LVN C G++ EA +FL +M G P V +++++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 131 GLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSG------------------- 171
+ + G A++++ M+++GF + TFN LI +C+ G
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 172 ----------------EVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLL 215
+++ +E + G D+ TY ++ A+ K G +++A +L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 216 HNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRG 275
+ L G P Y +I G+ + G+ A EM+ K P+ Y+ L+ R
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 276 GRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
G+ EA + E MG+ P + F+ + GL + D A
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 123/244 (50%)
Query: 14 SVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYA 73
S S T +++I + GL+ A+++ K CQ L YN LL C+ K A
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 74 LIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLL 133
+ RM+ +G PD TY ++ A C GK+ +A E L ++S KG +P + + ++ GL
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 134 NAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVS 193
AG A +++++M + D T++SL+ + + G+V+ ++ ++ ++G+ +
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 194 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEM 253
T+ ++ + K+ D A L ++ G KP + Y +I+G+ G +A +E+
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Query: 254 KIKG 257
KG
Sbjct: 581 CNKG 584
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 132/267 (49%), Gaps = 5/267 (1%)
Query: 57 SLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDK 116
+L+ C + A ++ + G VPD TY ++++ +C +G++ A L MS
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-- 199
Query: 117 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFC 176
+P V + +++ L ++G L+ A +++++M+++ D+ T+ LIE C+ V
Sbjct: 200 -VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 177 VEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKG 236
+++ + G DV TY +L+ + K G +DEA + L+++ G +P + I++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 237 MFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPI 296
M G++ DA ++M KG P+ + +LI R G A + L +M + G P
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 297 SRCFDLVTDGLKNCGKHDLAEKIELLE 323
S ++ + G C + + IE LE
Sbjct: 379 SLSYNPLLHGF--CKEKKMDRAIEYLE 403
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 5/214 (2%)
Query: 9 KPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLF 68
+P +LS +P ++ F K +D A+E + + C ++ YN++L ALC+
Sbjct: 376 QPNSLSYNP-----LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 69 HGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLL 128
A ++ ++ KG P TY +++ +GK +A + L EM K P L
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 129 VQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGL 188
V GL G ++ A + ++ + G + TFNS++ +CKS + + ++ + G
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550
Query: 189 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG 222
+ ++Y ILI ++ GM EA LL+ L G
Sbjct: 551 KPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 36/257 (14%)
Query: 100 SGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLET 159
+G++ E +FL+ M G P + L++G G A +++ + G V D+ T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 160 FNSLIETICKSGEVEFCVEMY-----------YSVCKLGLC------------------- 189
+N +I CK+GE+ + + Y+ LC
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 190 --ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
DV TY ILI A + + A +LL + + G P Y ++ G+ + G+ D+A
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 248 CFFSEMKIKGHPPNRPVYTMLI-TMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDG 306
F ++M G PN + +++ +MC GR+++A L +M G +P F+++ +
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCST-GRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 307 LKNCGKHDLAEKIELLE 323
L C K L I++LE
Sbjct: 354 L--CRKGLLGRAIDILE 368
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 5/191 (2%)
Query: 132 LLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCAD 191
++ G LE + + M+ G V D+ +LI C+ G+ ++ + G D
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 192 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFS 251
V TY ++I KAG I+ A +L + P Y I++ + G+ A
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 252 EMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCG 311
M + P+ YT+LI R A L EM + G TP ++++ +G+ C
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI--CK 286
Query: 312 KHDLAEKIELL 322
+ L E I+ L
Sbjct: 287 EGRLDEAIKFL 297
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%)
Query: 3 KTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFAL 62
K ++ M+ +L T S ++ + G VD A++ F++ + + +NS++ L
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 63 CEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGF 118
C+ + A + MI +G P++ +Y IL+ G +EA E L E+ +KG
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 143/291 (49%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S +I+ F K G + A E++N+ + YNSL+ C+ H A + M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ KG PD TY+IL+N++C + ++ + +E+S KG P + LV G +G L
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+AK++ +M+ +G + T+ L++ +C +GE+ +E++ + K + + Y I+
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + A +D+A+ L +L + G KP Y +I G+ ++G +A F +MK G
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKN 309
P+ Y +LI G + + + EM G + S +V D L +
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 141/312 (45%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
I+ M Y T ++ K G A+++F K N + V+ Y+ ++ +LC+
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 65 VKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG 124
F A +L M KG D TY+ L+ C+ GK + + L+EM + P V
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
L+ + G L AK++ N+MI +G D T+NSLI+ CK + +M+ +
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
G D+ TY ILI + KA +D+ RL + G P Y ++ G + G+ +
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 245 DAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVT 304
A F EM +G PP+ Y +L+ G +A +M + +T ++++
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 305 DGLKNCGKHDLA 316
G+ N K D A
Sbjct: 498 HGMCNASKVDDA 509
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 146/354 (41%), Gaps = 39/354 (11%)
Query: 7 LMKPYNLSVSPQTL--SLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
L + + L P T+ S ++ F G V AV + ++ + ++ ++L+ LC
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 65 VKLFHGAYALIRRMIRKGFVPDKRTY---------------------------------- 90
A LI RM+ GF PD+ TY
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 91 -AILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI 149
+I++++ C G +A EM KG V L+ GL N G + +M+ +MI
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 150 KQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMID 209
+ + D+ TF++LI+ K G++ E+Y + G+ D TY LI K +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 210 EAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLI 269
EA ++ +V G +P Y+ +I + + DD F E+ KG PN Y L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 270 TMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELLE 323
+ G+ A EM G+ P + ++ DGL C +L + +E+ E
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL--CDNGELNKALEIFE 479
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 123/250 (49%), Gaps = 2/250 (0%)
Query: 63 CEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPV 122
C K A++++ R + G+ PD T++ LVN +C G++ EA + M + P +
Sbjct: 116 CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 175
Query: 123 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYS 182
L+ GL G + A ++++M++ GF D T+ ++ +CKSG ++++
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 183 VCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQ 242
+ + + A V Y I+I ++ K G D+A L + + G K Y+ +I G+ G+
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 243 FDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDL 302
+DD EM + P+ ++ LI + + G+ +EA EM G+ P + ++
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 303 VTDGL--KNC 310
+ DG +NC
Sbjct: 356 LIDGFCKENC 365
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 4/288 (1%)
Query: 29 KHGLVD----NAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFV 84
++G+VD +A+++F + +N L A+ K + + M G
Sbjct: 43 RNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 102
Query: 85 PDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQM 144
D T I++N +C K+ A L G+ P LV G G + A +
Sbjct: 103 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162
Query: 145 VNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSK 204
V++M++ DL T ++LI +C G V + + + + G D TY ++ + K
Sbjct: 163 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222
Query: 205 AGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPV 264
+G A L + E K Y+ +I + + G FDDA F+EM++KG +
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 265 YTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK 312
Y+ LI G++ + A L EM + P F + D GK
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T++++I + + + A V + + + +++L+ C A AL+ RM
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ PD T + L+N C G++ EA + M + GF P ++ L +G
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A + KM ++ + ++ +I+++CK G + + ++ + G+ ADV TY L
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + G D+ ++L ++ P ++ +I + G+ +A ++EM +G
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 259 PPNRPVYTMLI 269
P+ Y LI
Sbjct: 347 APDTITYNSLI 357
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 64/166 (38%)
Query: 151 QGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDE 210
G D+ T +I C+ ++ F + KLG D T+ L+ G + E
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 211 AFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLIT 270
A L+ +VE +P + +I G+ +G+ +A M G P+ Y ++
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 271 MCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
+ G A + +M E + + +V D L G D A
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 142/296 (47%), Gaps = 1/296 (0%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
+ELM+ LS + +T + +I+ + K V A+ V NK V+ YNSL+ C
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 65 VKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG 124
F AY L+ M +G VPD+ TY ++++ C S ++ EA + + KG NP V
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
L+ G AG ++ A M+ KM+ + + + TFN+LI +C G+++ + +
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
K+GL VST ILI + K G D A+ ++ G KP Y I+ R G+
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 245 DAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCF 300
DA ++M+ G P+ Y+ LI G G+ A + L M + G P F
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 142/298 (47%), Gaps = 1/298 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I + + +D+A +VFN+ C++ + Y L+ LC + A L +M
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
P RTY +L+ + C S + EA ++EM + G P + +L+ L +
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
E A++++ +M+++G + ++ T+N+LI CK G +E V++ + L + TY L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I K+ + +A +L+ ++E P Y +I G R G FD A+ S M +G
Sbjct: 435 IKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
P++ YT +I + R EA + + + G+ P + + DG GK D A
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 138/299 (46%), Gaps = 8/299 (2%)
Query: 30 HGL-----VDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFV 84
HGL +D A+++F K C V Y L+ +LC + A L++ M G
Sbjct: 296 HGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355
Query: 85 PDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQM 144
P+ TY +L+++ CS K +A+E L +M +KG P V + L+ G G +E A +
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 145 VNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSK 204
V M + + T+N LI+ CKS V + + + + + DV TY LI +
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 205 AGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPV 264
+G D A+RLL + + G P Y +I + + + ++A F ++ KG PN +
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 265 YTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELLE 323
YT LI + G+ EA L +M P S F+ + GL C L E L E
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL--CADGKLKEATLLEE 591
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 147/334 (44%), Gaps = 36/334 (10%)
Query: 18 QTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRR 77
T +++I+ + A E+ + V+ YN+L+ C+ + A ++
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 78 MIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGY 137
M + P+ RTY L+ +C S + +A L +M ++ P V + L+ G +G
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 138 LESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKI 197
+SA ++++ M +G V D T+ S+I+++CKS VE +++ S+ + G+ +V Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 198 LIPAVSKAGMIDEAF-------------------RLLHNLVEDGH--------------- 223
LI KAG +DEA L+H L DG
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 224 -KPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAA 282
+P S +I + + G FD A+ F +M G P+ YT I R GR ++A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 283 NYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
+ + +M E G++P + + G + G+ + A
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 137/318 (43%), Gaps = 17/318 (5%)
Query: 2 WKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFA 61
++ + LM L T + +I+ K V+ A ++F+ V++Y +L+
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 62 LCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPP 121
C+ A+ ++ +M+ K +P+ T+ L++ C+ GK++EA ++M G P
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 122 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYY 181
V +L+ LL G + A +M+ G D T+ + I+T C+ G + +M
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 182 SVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRG 241
+ + G+ D+ TY LI G + AF +L + + G +P + +IK +
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL--- 718
Query: 242 QFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFD 301
EMK + P + M F L +M E +TP ++ ++
Sbjct: 719 ----------EMKYGKQKGSEPELCAMSNMM----EFDTVVELLEKMVEHSVTPNAKSYE 764
Query: 302 LVTDGLKNCGKHDLAEKI 319
+ G+ G +AEK+
Sbjct: 765 KLILGICEVGNLRVAEKV 782
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 117/254 (46%), Gaps = 4/254 (1%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
YN+LL +L L + M+ P+ TY +VN +C G + EA +++ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
+ G +P L+ G L+SA ++ N+M +G + + LI +C + ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
++++ + V TY +LI ++ + EA L+ + E G KP Y +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLIT-MCGRGGRFVEAANYLVEMTE-MG 292
+ + +F+ A +M KG PN Y LI C RG +E A +VE+ E
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG--MIEDAVDVVELMESRK 423
Query: 293 LTPISRCFDLVTDG 306
L+P +R ++ + G
Sbjct: 424 LSPNTRTYNELIKG 437
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 1/235 (0%)
Query: 90 YAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI 149
Y L+N+ G + E ++ EM + P + + +V G G +E A Q V+K++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 150 KQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMID 209
+ G D T+ SLI C+ +++ +++ + G + Y LI + A ID
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 210 EAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLI 269
EA L + +D P Y +IK + + +A EM+ G PN YT+LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 270 TMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK-HDLAEKIELLE 323
+F +A L +M E GL P ++ + +G G D + +EL+E
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 21/243 (8%)
Query: 15 VSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL----- 67
VSP T S +I+ +G G + A +V + C+ + SL+ L E+K
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 68 -------------FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
F L+ +M+ P+ ++Y L+ C G +R A++ M
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 115 -DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEV 173
++G +P + L+ A ++V+ MI G + LE+ LI + K GE
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 174 EFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPI 233
E ++ ++ + G D +KI+I V K G+++ + L + + ++G K Y+ +
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL 907
Query: 234 IKG 236
I+G
Sbjct: 908 IEG 910
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/384 (19%), Positives = 148/384 (38%), Gaps = 93/384 (24%)
Query: 15 VSPQTL--SLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE-------- 64
V+P + + +I+ + K G VD A + K + NC L +N+L+ LC
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 65 ------VKL---------------------FHGAYALIRRMIRKGFVPDKRTYAILVNAW 97
VK+ F AY+ ++M+ G PD TY + +
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 98 CSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDL 157
C G++ +A++ + +M + G +P + L++G + G A ++ +M G
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 158 ETFNSLIETIC-------KSGEVEFC-----------VEMYYSVCKLGLCADVSTYKILI 199
TF SLI+ + K E E C VE+ + + + + +Y+ LI
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 200 PAVSKAGMI------------------------------------DEAFRLLHNLVEDGH 223
+ + G + +EA +++ +++ GH
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 224 KPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAAN 283
P +I G++++G+ + F + G+ + + ++I G+ G VEA
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQG-LVEAFY 886
Query: 284 YLVEMTEM-GLTPISRCFDLVTDG 306
L + E G S+ + L+ +G
Sbjct: 887 ELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 140/274 (51%), Gaps = 2/274 (0%)
Query: 36 AVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVN 95
A+E+F + + C+ YN L+ +LC A ++++M G TY L++
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 96 AWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVL 155
+C + K REA+E EM G + + L+ GL + +E A Q++++MI +G
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 156 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLL 215
D T+NSL+ C+ G+++ ++ ++ G D+ TY LI + KAG ++ A +LL
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 216 HNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH-PPNRPVYTMLIT-MCG 273
++ G P Y P+I+G+FR+ + +A F EM + PP+ Y ++ +C
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Query: 274 RGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
GG EA ++LVE+ E G P ++ +GL
Sbjct: 659 GGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 149/320 (46%), Gaps = 3/320 (0%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
+E M Y L +T + +++ + + G +D A+ + + F C + N ++ C+
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 65 VKLFHGAYALIRRMIRK-GFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVR 123
A I+ M + GF PD+ T+ LVN C +G ++ A E + M +G++P V
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331
Query: 124 GRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSV 183
+ ++ GL G ++ A +++++MI + + T+N+LI T+CK +VE E+ +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 184 CKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQF 243
G+ DV T+ LI + A L + G +P Y +I + +G+
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 244 DDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLV 303
D+A +M++ G + Y LI + + EA EM G++ S ++ +
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 304 TDGLKNCGKHDLAEKIELLE 323
DGL C + + +L++
Sbjct: 512 IDGL--CKSRRVEDAAQLMD 529
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 136/292 (46%), Gaps = 6/292 (2%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I K G V AVEV ++ +C + YN+L+ LC+ A L R +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
KG +PD T+ L+ C + R A E +EM KG P ++L+ L + G L
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A M+ +M G + T+N+LI+ CK+ + E++ + G+ + TY L
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + K+ +++A +L+ ++ +G KP Y ++ R G A M G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYL---VEMTEMGLTPISRCFDLVTDGL 307
P+ Y LI+ + GR VE A+ L ++M + LTP ++ V GL
Sbjct: 572 EPDIVTYGTLISGLCKAGR-VEVASKLLRSIQMKGINLTP--HAYNPVIQGL 620
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 138/301 (45%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + ++ K G V +A+E+ + V YNS++ LC++ A ++ +M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
I + P+ TY L++ C ++ EA E + ++ KG P V + L+QGL
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A ++ +M +G D T+N LI+++C G+++ + M + G V TY L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I KA EA + + G Y +I G+ + + +DA +M ++G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
P++ Y L+T RGG +AA+ + MT G P + + GL G+ ++A K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 319 I 319
+
Sbjct: 597 L 597
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 146/328 (44%), Gaps = 10/328 (3%)
Query: 1 MWKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFN-KCTAFNCQQCVLLYNSLL 59
M K +E MK + T ++IE + + L D + V + F + YN +L
Sbjct: 102 MKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRML 161
Query: 60 FALCE---VKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDK 116
L + +KL ++A +M G PD T+ +L+ A C + ++R A L++M
Sbjct: 162 NLLVDGNSLKLVEISHA---KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY 218
Query: 117 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFC 176
G P + ++QG + G L+ A ++ +M++ G + N ++ CK G VE
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 177 VEMYYSVC-KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIK 235
+ + + G D T+ L+ + KAG + A ++ ++++G+ P Y +I
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 236 GMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTP 295
G+ + G+ +A +M + PN Y LI+ + + EA +T G+ P
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 296 ISRCFDLVTDGLKNCGKHDLAEKIELLE 323
F+ + GL H +A +EL E
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVA--MELFE 424
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 37/171 (21%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + ++ F + G + A ++ T+ C+ ++ Y +L+ LC+ A L+R +
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 79 IRKGF------------------------------------VPDKRTYAILVNAWCSSG- 101
KG PD +Y I+ C+ G
Sbjct: 602 QMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGG 661
Query: 102 KMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG 152
+REA +FL E+ +KGF P +L +GLL E+ ++VN ++++
Sbjct: 662 PIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 140/291 (48%), Gaps = 1/291 (0%)
Query: 23 IIEEFGKHGLVDNAVEVFNK-CTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRK 81
+I F HG +D+A V + T++ V YNSL++ + L A ++ M K
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 82 GFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESA 141
G P+ +Y ILV+ +C GK+ EA L EMS G P G + L+ + A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 142 KQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPA 201
++ +M ++G D+ TFNSLI +C+ E++ + + + G+ A+ TY LI A
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 202 VSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPN 261
+ G I EA +L++ +V G Y +IKG+ R G+ D A F +M GH P+
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 262 RPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK 312
+LI R G EA + EM G TP F+ + +GL G+
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 145/285 (50%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
+ +++++ F K G +D A V N+ +A + + +N L+ A C+ A + R M
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
RKG PD T+ L++ C +++ A L++M +G + L+ L G +
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A+++VN+M+ QG LD T+NSLI+ +C++GEV+ ++ + + G + IL
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + ++GM++EA +V G P + +I G+ R G+ +D F +++ +G
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLV 303
PP+ + L++ +GG +A L E E G P R + ++
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 147/319 (46%), Gaps = 7/319 (2%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
+E+ Y+ + ++ ++++E A VF + + + ++ A C
Sbjct: 170 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA 229
Query: 65 VKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG 124
V A +L+R M + G VP+ Y L+++ ++ EA + L+EM G P
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
+ ++ GL + A +MVN+M+ +GF D T+ L+ +CK G V+ +++Y +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED-GHKPFPSLYAPIIKGMFRRGQF 243
K ++ + LI G +D+A +L ++V G P Y +I G ++ G
Sbjct: 350 K----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 244 DDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLV 303
A +M+ KG PN YT+L+ + G+ EA N L EM+ GL P + F+ +
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 304 TDGLKNCGKHDLAEKIELL 322
C +H + E +E+
Sbjct: 466 ISAF--CKEHRIPEAVEIF 482
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 15 VSPQTLSL--IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
+ P T+ +I F K + AVE+F + C+ V +NSL+ LCEV A
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKG-------FNPPVRG- 124
L+R MI +G V + TY L+NA+ G+++EA++ + EM +G +N ++G
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Query: 125 -----------------RD----------LLVQGLLNAGYLESAKQMVNKMIKQGFVLDL 157
RD +L+ GL +G +E A + +M+ +G D+
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 634
Query: 158 ETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHN 217
TFNSLI +C++G +E + M+ + G+ D T+ L+ + K G + +A LL
Sbjct: 635 VTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Query: 218 LVEDG----HKPFPSLYAPII--KGMFRRGQFDDAF 247
+EDG H+ + L II + + RR ++ AF
Sbjct: 695 GIEDGFVPNHRTWSILLQSIIPQETLDRRRFYNAAF 730
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 134 bits (337), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 155/313 (49%), Gaps = 3/313 (0%)
Query: 1 MWKTIELMKPYNLS-VSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLL 59
+W IE M+ N + P+ +++ F +V AVEV ++ + + ++ LL
Sbjct: 150 VWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLL 209
Query: 60 FALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFN 119
ALC+ A + M R+ F P+ R + L+ WC GK+ EA+E L +M + G
Sbjct: 210 DALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLE 268
Query: 120 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGE-VEFCVE 178
P + L+ G +AG + A ++N M K+GF ++ + LI+ +C++ + ++ +
Sbjct: 269 PDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMR 328
Query: 179 MYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMF 238
++ + + G AD+ TY LI K GMID+ + +L ++ + G P Y I+
Sbjct: 329 VFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHE 388
Query: 239 RRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISR 298
++ QF++ +MK +G P+ +Y ++I + + G EA EM GL+P
Sbjct: 389 KKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVD 448
Query: 299 CFDLVTDGLKNCG 311
F ++ +G + G
Sbjct: 449 TFVIMINGFTSQG 461
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 12/238 (5%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ Y T + +I F K G++D V + + Y ++ A + +
Sbjct: 333 MERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQ 392
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
F LI +M R+G PD Y +++ C G+++EA EM G +P V +
Sbjct: 393 FEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVI 452
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLE--TFNSLIETICKSGEVEF------CVEM 179
++ G + G+L A +M+ +G + T SL+ + + ++E C+
Sbjct: 453 MINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISN 512
Query: 180 YYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGM 237
S C+L +VS + I I A+ G + EA +++E P P+ YA ++KG+
Sbjct: 513 KTSSCEL----NVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 197 ILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIK 256
+L+ + A M+ +A +L + + G +P ++ ++ + + G +A F +M+ K
Sbjct: 172 VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK 231
Query: 257 GHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK 312
PPN +T L+ R G+ +EA LV+M E GL P F + G + GK
Sbjct: 232 -FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 286
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 158/357 (44%), Gaps = 38/357 (10%)
Query: 2 WKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFA 61
W+T+E +K +SV ++I + K G+ + AVE F + F+C+ V YN +L
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171
Query: 62 LCEVKLFHG-AYALIRRMIR-----------------------------------KGFVP 85
+ ++F A+A+ M++ +G P
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 86 DKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMV 145
++ TY IL++ C G +A++ EM G P + L+ G G + A +++
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 146 NKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKA 205
K GFVL L ++SLI+ + ++ E+Y ++ K + D+ Y ILI +SKA
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKA 351
Query: 206 GMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVY 265
G I++A +LL ++ G P Y +IK + RG ++ EM P+ +
Sbjct: 352 GKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH 411
Query: 266 TMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELL 322
T+LI R G EA E+ + G +P F+ + DGL C +L E LL
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL--CKSGELKEARLLL 466
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 146/326 (44%), Gaps = 14/326 (4%)
Query: 3 KTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFAL 62
K + M +S + T +++I + G D+A ++F + + +N+LL
Sbjct: 219 KMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGF 278
Query: 63 CEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPV 122
C++ A+ L+R + GFV R Y+ L++ + + +A E M K P +
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 123 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYS 182
+L+QGL AG +E A ++++ M +G D +N++I+ +C G +E +
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 183 VCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQ 242
+ + D T+ ILI ++ + G++ EA + + + G P + + +I G+ + G+
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 243 FDDAFCFFSEMKIK---------GHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGL 293
+A +M++ H NR TM+ G ++A L + G
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV-----ESGSILKAYRDLAHFADTGS 513
Query: 294 TPISRCFDLVTDGLKNCGKHDLAEKI 319
+P ++++ +G G D A K+
Sbjct: 514 SPDIVSYNVLINGFCRAGDIDGALKL 539
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%)
Query: 12 NLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGA 71
N S + T ++++ K G +A ++F+ T + Y L+ LC+ A
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDA 252
Query: 72 YALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQG 131
L M G PD + L++ +C G+M EA E L+ GF +RG L+ G
Sbjct: 253 RKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDG 312
Query: 132 LLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCAD 191
L A A ++ M+K+ D+ + LI+ + K+G++E +++ S+ G+ D
Sbjct: 313 LFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD 372
Query: 192 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFS 251
Y +I A+ G+++E L + E P + +I M R G +A F+
Sbjct: 373 TYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFT 432
Query: 252 EMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEM 288
E++ G P+ + LI + G EA L +M
Sbjct: 433 EIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 25/320 (7%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +++I ++GLV A E+F + C V +N+L+ LC+ A L+ +M
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Query: 79 ---------IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLV 129
+R + R++ +V SG + +A L +D G +P + ++L+
Sbjct: 470 EVGRPASLFLRLSHSGN-RSFDTMVE----SGSILKAYRDLAHFADTGSSPDIVSYNVLI 524
Query: 130 QGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLC 189
G AG ++ A +++N + +G D T+N+LI + + G E +++Y+ K
Sbjct: 525 NGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFR 582
Query: 190 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCF 249
+ Y+ L+ + + AF L ++ A I+ F+ G+ + A
Sbjct: 583 HSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKK-ISCLDDETANEIEQCFKEGETERALRR 641
Query: 250 FSEMKIKGHPPNRPVYTM-LITMCGRGGRFVEAANYLVEMTEMGL--TPISRCFDLVTDG 306
E+ + YT+ LI +C + GRF EA + E + TP S C L+ G
Sbjct: 642 LIELDTRKDELTLGPYTIWLIGLC-QSGRFHEALMVFSVLREKKILVTPPS-CVKLI-HG 698
Query: 307 LKNCGKHDLAEKIELLEVSL 326
L C + L IE+ +L
Sbjct: 699 L--CKREQLDAAIEVFLYTL 716
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 40/175 (22%)
Query: 187 GLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKP--------------------- 225
G+ D + +LI A +K GM ++A + E +P
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 226 -------------FPSLY--APIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLIT 270
P+LY ++ G++++G+ DA F +M +G PNR YT+LI+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 271 -MCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELLEV 324
+C RG +A EM G P S + + DG G+ + E ELL +
Sbjct: 242 GLCQRGSA-DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR--MVEAFELLRL 293
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 149/310 (48%), Gaps = 2/310 (0%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ N+ + S+II+ KHG +DNA +FN+ ++ YN L+ C
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
+ L+R MI++ P+ T+++L++++ GK+REA+E +EM +G P
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L+ G +L+ A QMV+ M+ +G ++ TFN LI CK+ ++ +E++ + G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
+ AD TY LI + G ++ A L +V P Y ++ G+ G+ + A
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
F +++ + +Y ++I + +A + + G+ P + ++++ GL
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 553
Query: 308 KNCGKHDLAE 317
C K L+E
Sbjct: 554 --CKKGPLSE 561
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 141/292 (48%), Gaps = 4/292 (1%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S++I+ F K G + A E+ + + Y SL+ C+ A ++ M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ KG P+ RT+ IL+N +C + ++ + E ++MS +G + L+QG G L
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
AK++ +M+ + ++ T+ L++ +C +GE E +E++ + K + D+ Y I+
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + A +D+A+ L +L G KP Y +I G+ ++G +A F +M+ GH
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGL----TPISRCFDLVTDG 306
P+ Y +LI G ++ + E+ G + I D+++DG
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 136/306 (44%), Gaps = 4/306 (1%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T++ ++ G A+ + +K + CQ + Y +L +C+ A L+R+M
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ D Y+I+++ C G + A EM KG + ++L+ G NAG
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ +++ MIK+ ++ TF+ LI++ K G++ E++ + G+ D TY L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I K +D+A +++ +V G P + +I G + + DD F +M ++G
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA-- 316
+ Y LI G+ A EM + P + ++ DGL + G+ + A
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 317 --EKIE 320
EKIE
Sbjct: 495 IFEKIE 500
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 4/295 (1%)
Query: 29 KHGLVD----NAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFV 84
+ GLVD +A+++F V+ ++ L A+ + K + AL ++M KG
Sbjct: 61 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120
Query: 85 PDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQM 144
+ T +I++N +C K+ A + ++ G+ P L+ GL G + A ++
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 145 VNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSK 204
V++M++ G DL T N+L+ +C SG+ + + + + G + TY ++ + K
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 205 AGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPV 264
+G A LL + E K Y+ II G+ + G D+AF F+EM++KG N
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 265 YTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
Y +LI GR+ + A L +M + + P F ++ D GK AE++
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 135/312 (43%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
I+ M Y + T ++ K G A+E+ K N + + Y+ ++ LC+
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 65 VKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG 124
A+ L M KG + TY IL+ +C++G+ + + L++M + NP V
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
+L+ + G L A+++ +MI +G D T+ SLI+ CK ++ +M +
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
G ++ T+ ILI KA ID+ L + G Y +I+G G+ +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 245 DAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVT 304
A F EM + PPN Y +L+ G +A ++ + + ++++
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 305 DGLKNCGKHDLA 316
G+ N K D A
Sbjct: 516 HGMCNASKVDDA 527
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%)
Query: 63 CEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPV 122
C + A++ + ++I+ G+ P+ T++ L+N C G++ EA E + M + G P +
Sbjct: 134 CRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 193
Query: 123 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYS 182
+ LV GL +G A +++KM++ G + T+ ++ +CKSG+ +E+
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 183 VCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQ 242
+ + + D Y I+I + K G +D AF L + + G Y +I G G+
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 243 FDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDL 302
+DD +M + PN +++LI + G+ EA EM G+ P + +
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 303 VTDGLKNCGKHDLAEKIELLEVS 325
+ DG D A ++ L VS
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVS 396
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 7/314 (2%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
TLS++I F + + A K + + +++L+ LC A L+ RM
Sbjct: 125 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ G PD T LVN C SGK EA + +M + G P ++ + +G
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A +++ KM ++ LD ++ +I+ +CK G ++ ++ + G+ ++ TY IL
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I AG D+ +LL ++++ P ++ +I + G+ +A EM +G
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 259 PPNRPVYTMLIT-MCGRGGRFVEAANYLVE-MTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
P+ YT LI C ++ AN +V+ M G P R F+++ +G C + +
Sbjct: 365 APDTITYTSLIDGFCKEN--HLDKANQMVDLMVSKGCDPNIRTFNILINGY--CKANRID 420
Query: 317 EKIELL-EVSLRSV 329
+ +EL ++SLR V
Sbjct: 421 DGLELFRKMSLRGV 434
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 113/273 (41%), Gaps = 35/273 (12%)
Query: 3 KTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFAL 62
+ ++LM + +T +++I + K +D+ +E+F K + + YN+L+
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 63 CEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPV 122
CE+ + A L + M+ + P+ TY IL++ C +G+ +A E +++
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE-------- 500
Query: 123 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYS 182
K LD+ +N +I +C + +V+ +++ S
Sbjct: 501 ---------------------------KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533
Query: 183 VCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQ 242
+ G+ V TY I+I + K G + EA L + EDGH P Y +I+ G
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 593
Query: 243 FDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRG 275
+ E+K G + M+I M G
Sbjct: 594 ATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 143/291 (49%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S +I+ F K G + A +++++ + ++ Y+SL+ C A + M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ K PD TY L+ +C ++ E E +EMS +G ++L+QGL AG
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A+++ +M+ G ++ T+N+L++ +CK+G++E + ++ + + + + TY I+
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + KAG +++ + L NL G KP Y +I G R+G ++A F EMK G
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKN 309
PN Y LI R G +A + EM G + LVT+ L +
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 618
Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 153/334 (45%), Gaps = 36/334 (10%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKG 82
II+ K+ +D+A+ +F + + V+ Y+SL+ LC + A L+ MI +
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 83 FVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAK 142
PD T++ L++A+ GK+ EA++ EM + +P + L+ G L+ AK
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 143 QMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAV 202
QM M+ + D+ T+N+LI+ CK VE +E++ + + GL + TY ILI +
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 203 SKAGMIDEAFRLLHNLVEDGHKPF---------------------------------PSL 229
+AG D A + +V DG P P++
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 230 YA--PIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVE 287
Y +I+GM + G+ +D + F + +KG P+ Y +I+ R G EA E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 288 MTEMGLTPISRCFD-LVTDGLKNCGKHDLAEKIE 320
M E G P S C++ L+ L++ + AE I+
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 141/299 (47%), Gaps = 4/299 (1%)
Query: 25 EEFGKHGL----VDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIR 80
E+ ++GL +D+AV +F + ++ ++ LL A+ ++ F +L +M
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109
Query: 81 KGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLES 140
G + TY+IL+N +C ++ A L +M G+ P + L+ G ++ +
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 141 AKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIP 200
A +V++M G+ + TFN+LI + + + + + G D+ TY +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 201 AVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPP 260
+ K G D AF LL+ + + +P +Y II G+ + DDA F EM+ KG P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 261 NRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
N Y+ LI+ GR+ +A+ L +M E + P F + D GK AEK+
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 6/279 (2%)
Query: 3 KTIELMKPYN----LSVSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYN 56
K +E K Y+ S+ P T S +I F H +D A ++F + +C V+ YN
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 57 SLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDK 116
+L+ C+ K + R M ++G V + TY IL+ +G AQE +EM
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 117 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFC 176
G P + + L+ GL G LE A + + + + T+N +IE +CK+G+VE
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 177 VEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKG 236
+++ ++ G+ DV Y +I + G +EA L + EDG P Y +I+
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 237 MFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRG 275
R G + + EM+ G + ++ M G
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
TLS ++ + + AV + ++ Q + +N+L+ L A ALI RM
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ KG PD TY ++VN C G A L +M P V + ++ GL ++
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A + +M +G ++ T++SLI +C G + + + + DV T+ L
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I A K G + EA +L +V+ P Y+ +I G + D+A F M K
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
P+ Y LI + R E EM++ GL + ++++ GL G D+A++
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 319 I 319
I
Sbjct: 453 I 453
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 128/298 (42%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I H A+ + ++ A CQ ++ Y ++ LC+ A+ L+ +M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ P Y +++ C M +A +EM KG P V L+ L N G
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A ++++ MI++ D+ TF++LI+ K G++ ++Y + K + + TY L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I +DEA ++ +V P Y +IKG + + ++ F EM +G
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
N Y +LI + G A EM G+ P ++ + DGL GK + A
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 81/192 (42%)
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
R+ L + L+ L+ A + +M+K + F+ L+ I K + + + + +
Sbjct: 49 REKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ 108
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
LG+ + TY ILI + + A +L +++ G++P + ++ G +
Sbjct: 109 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168
Query: 245 DAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVT 304
+A +M + G+ PN + LI + EA + M G P + +V
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 305 DGLKNCGKHDLA 316
+GL G DLA
Sbjct: 229 NGLCKRGDTDLA 240
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 156/351 (44%), Gaps = 37/351 (10%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ N+ + S+II+ K G +DNA +FN+ + ++ YN+L+ C
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
+ L+R MI++ P+ T+++L++++ GK+REA + L+EM +G P +
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L+ G LE A QMV+ MI +G D+ TFN LI CK+ ++ +E++ + G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKP---------------------- 225
+ A+ TY L+ ++G ++ A +L +V +P
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 226 -------------FPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMC 272
+Y II GM + DDA+ F + +KG + Y ++I+
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL 553
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELLE 323
R +A +MTE G P ++++ + G D EL+E
Sbjct: 554 CRKDSLSKADILFRKMTEEGHAPDELTYNILIRA--HLGDDDATTAAELIE 602
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 134/280 (47%), Gaps = 2/280 (0%)
Query: 15 VSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
+SP T S++I+ F K G + A ++ + + YNSL+ C+ A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
++ MI KG PD T+ IL+N +C + ++ + E +EMS +G + LVQG
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
+G LE AK++ +M+ + D+ ++ L++ +C +GE+E +E++ + K + D+
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSE 252
Y I+I + A +D+A+ L +L G K Y +I + R+ A F +
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 253 MKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMG 292
M +GH P+ Y +LI AA + EM G
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 138/287 (48%)
Query: 33 VDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAI 92
V A+E+ ++ + ++ N+L+ LC A LI RM+ GF P++ TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 93 LVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG 152
++N C SG+ A E L++M ++ +++ GL G L++A + N+M +G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 153 FVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAF 212
F D+ T+N+LI C +G + ++ + K + +V T+ +LI + K G + EA
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 213 RLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMC 272
+LL +++ G P Y +I G + + ++A M KG P+ + +LI
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
+ R + EM+ G+ + ++ + G GK ++A+K+
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 129/262 (49%), Gaps = 2/262 (0%)
Query: 63 CEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPV 122
C + A++ + ++++ G+ PD + L+N C ++ EA E + M + G P +
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 123 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYS 182
+ LV GL G + A ++++M++ GF + T+ ++ +CKSG+ +E+
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 183 VCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQ 242
+ + + D Y I+I + K G +D AF L + + G K Y +I G G+
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 243 FDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDL 302
+DD +M + PN +++LI + G+ EA L EM + G+ P + ++
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 303 VTDGLKNCGKHDLAEKIELLEV 324
+ DG C ++ L E I+++++
Sbjct: 374 LIDGF--CKENRLEEAIQMVDL 393
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 2/263 (0%)
Query: 15 VSPQTLSL--IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
++P T++ +I+ F K ++ A+++ + + C ++ +N L+ C+
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
L R M +G + + TY LV +C SGK+ A++ QEM + P + +L+ GL
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
+ G LE A ++ K+ K LD+ + +I +C + +V+ +++ S+ G+ D
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSE 252
Y I+I + + + +A L + E+GH P Y +I+ A E
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Query: 253 MKIKGHPPNRPVYTMLITMCGRG 275
MK G P + M+I M G
Sbjct: 604 MKSSGFPADVSTVKMVINMLSSG 626
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 136/303 (44%), Gaps = 2/303 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
TL+ ++ +G V +AV + ++ Q + Y +L +C+ A L+R+M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ D Y+I+++ C G + A EM KGF + + L+ G NAG
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ +++ MIK+ ++ TF+ LI++ K G++ ++ + + G+ + TY L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I K ++EA +++ ++ G P + +I G + + DD F EM ++G
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
N Y L+ + G+ A EM + P + ++ DGL C +L +
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL--CDNGELEKA 492
Query: 319 IEL 321
+E+
Sbjct: 493 LEI 495
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 145/323 (44%), Gaps = 3/323 (0%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ ++ S TLS++I F + + A K + +++N+LL LC
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A L+ RM+ G P T LVN C +GK+ +A + M + GF P
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
++ + +G A +++ KM ++ LD ++ +I+ +CK G ++ ++ + G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
AD+ TY LI AG D+ +LL ++++ P ++ +I + G+ +A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
EM +G PN Y LI + R EA + M G P F+++ +G
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 308 KNCGKHDLAEKIELL-EVSLRSV 329
C + + + +EL E+SLR V
Sbjct: 414 --CKANRIDDGLELFREMSLRGV 434
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%)
Query: 34 DNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAIL 93
D+AV++F V+ +N L A+ + K + AL ++M KG T +I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 94 VNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGF 153
+N +C K+ A + ++ G+ P + L+ GL + A ++V++M++ G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 154 VLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFR 213
L T N+L+ +C +G+V V + + + G + TY ++ + K+G A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 214 LLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCG 273
LL + E K Y+ II G+ + G D+AF F+EM+IKG + Y LI
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 274 RGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
GR+ + A L +M + ++P F ++ D GK A+++
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 84/215 (39%)
Query: 102 KMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFN 161
K +A + ++M P V + L + E + +M +G + T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 162 SLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 221
+I C+ ++ + + KLG D + L+ + + EA L+ +VE
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 222 GHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEA 281
GHKP ++ G+ G+ DA M G PN Y ++ + + G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 282 ANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
L +M E + + + ++ DGL G D A
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%)
Query: 24 IEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGF 83
++ +G+ G V AV VF + ++C+ V YN+++ L + F A+ + RM +G
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 84 VPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQ 143
PD ++ I + ++C + + A L MS +G V +V G + +
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 144 MVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVS 203
+ KM+ G L L TFN L+ +CK G+V+ C ++ V K G+ ++ TY + I +
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 204 KAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRP 263
+ G +D A R++ L+E G KP Y +I G+ + +F +A + +M +G P+
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 264 VYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
Y LI +GG A + + G P + + DGL + G+ + A
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 145/308 (47%), Gaps = 3/308 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +I+ G + A+ +FN+ + V+LYN+L+ L + A L M
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
KG +P+ +T+ ILVN C G + +A ++ M KG+ P + ++L+ G +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
E+A ++++ M+ G D+ T+NSL+ +CK+ + E +E Y ++ + G ++ T+ IL
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
+ ++ + +DEA LL + P + +I G + G D A+ F +M+
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 259 -PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 317
+ P Y ++I A EM + L P + L+ DG G +L
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 318 K--IELLE 323
K +E++E
Sbjct: 658 KFLLEMME 665
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 123/262 (46%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
YN+L+ C+ + A ++ + GFVPD+ TY L++ C G+ A E
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
KG P V + L++GL N G + A Q+ N+M ++G + +++TFN L+ +CK G V
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
+ + G D+ T+ ILI S ++ A +L ++++G P Y ++
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
G+ + +F+D + M KG PN + +L+ R + EA L EM +
Sbjct: 504 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563
Query: 295 PISRCFDLVTDGLKNCGKHDLA 316
P + F + DG G D A
Sbjct: 564 PDAVTFGTLIDGFCKNGDLDGA 585
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 134/295 (45%)
Query: 13 LSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
+S+ T + ++ K G V ++ +K + YN + LC+ GA
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
++ +I +G PD TY L+ C + K +EA+ +L +M ++G P + L+ G
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
G ++ A+++V + GFV D T+ SLI+ +C GE + ++ G+ +V
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSE 252
Y LI +S GMI EA +L + + E G P + ++ G+ + G DA
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 253 MKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
M KG+ P+ + +LI + A L M + G+ P ++ + +GL
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 128/309 (41%), Gaps = 36/309 (11%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKG 82
+I+ G++ A ++ N+ + V +N L+ LC++ A L++ MI KG
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 83 FVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAK 142
+ PD T+ IL++ + + KM A E L M D G +P V + L+ GL E
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 143 QMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSV------------------- 183
+ M+++G +L TFN L+E++C+ +++ + + +
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 184 CKLG-----------------LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPF 226
CK G + + TY I+I A ++ + A +L +V+ P
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
Query: 227 PSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLV 286
Y ++ G + G + + F EM G P+ +I R EAA +
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696
Query: 287 EMTEMGLTP 295
M + GL P
Sbjct: 697 RMVQKGLVP 705
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 5 IELMKPYNLSVSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCT-AFNCQQCVLLYNSLLFA 61
+E MK N SV+P T +I+ F K+G +D A +F K A+ YN ++ A
Sbjct: 554 LEEMK--NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 62 LCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPP 121
E A L + M+ + PD TY ++V+ +C +G + +FL EM + GF P
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS 671
Query: 122 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETIC 168
+ ++ L + A ++++M+++G V + + TIC
Sbjct: 672 LTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE------AVNTIC 712
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 130 bits (328), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 152/315 (48%), Gaps = 2/315 (0%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ N+ T S II+ + G +D A+ +F + + V+ YNSL+ LC+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
++ L++ M+ + VP+ T+ +L++ + GK++EA E +EM +G +P + +
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L+ G L A M++ M++ D+ TF SLI+ C V+ ++++ ++ K G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
L A+ TY IL+ ++G I A L +V G P Y ++ G+ G+ + A
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
F +++ +YT +I +GG+ +A N + G+ P + ++ GL
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518
Query: 308 KNCGKHDLAEKIELL 322
C K L+E LL
Sbjct: 519 --CKKGSLSEANILL 531
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 111/224 (49%)
Query: 48 CQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQ 107
C ++ + SL+ C VK + R + ++G V + TY+ILV +C SGK++ A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 108 EFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETI 167
E QEM G P V +L+ GL + G LE A ++ + K L + + ++IE +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 168 CKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFP 227
CK G+VE ++ S+ G+ +V TY ++I + K G + EA LL + EDG+ P
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Query: 228 SLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITM 271
Y +I+ R G + EMK G + M+I M
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 137/289 (47%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +++++ F K G + A E++ + ++ YN+L+ C A ++ M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+R PD T+ L+ +C ++ + + + +S +G +LVQG +G +
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A+++ +M+ G + D+ T+ L++ +C +G++E +E++ + K + + Y +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + K G +++A+ L +L G KP Y +I G+ ++G +A +M+ G+
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
PN Y LI R G +A + EM G + + +V D L
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 142/319 (44%), Gaps = 4/319 (1%)
Query: 7 LMKPYNLSVSPQTLSL--IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
L K L P T + +I+ G V AV + ++ CQ V+ YNS++ +C
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 65 VKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG 124
A L+R+M + D TY+ ++++ C G + A +EM KG V
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
+ LV+GL AG ++ M+ + V ++ TFN L++ K G+++ E+Y +
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
G+ ++ TY L+ + EA +L +V + P + +IKG + D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 245 DAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVT 304
D F + +G N Y++L+ + G+ A EM G+ P + ++
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 305 DGLKNCGKHDLAEKIELLE 323
DGL + GK L + +E+ E
Sbjct: 446 DGLCDNGK--LEKALEIFE 462
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 142/295 (48%), Gaps = 2/295 (0%)
Query: 34 DNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAIL 93
D+A+ +F + ++ ++ A+ K F+ +++ G + T I+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 94 VNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGF 153
+N +C K A L ++ G+ P + L++GL G + A +V++M++ G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 154 VLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFR 213
D+ T+NS++ IC+SG+ +++ + + + ADV TY +I ++ + G ID A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 214 LLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCG 273
L + G K Y +++G+ + G+++D +M + PN + +L+ +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 274 RGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELLEVSLRS 328
+ G+ EA EM G++P ++ + DG C ++ L+E +L++ +R+
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGY--CMQNRLSEANNMLDLMVRN 362
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 112/234 (47%), Gaps = 5/234 (2%)
Query: 71 AYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQ 130
AY+++ ++++ G+ PD T+ L+ GK+ EA + M + G P V + +V
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 131 GLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCA 190
G+ +G A ++ KM ++ D+ T++++I+++C+ G ++ + ++ + G+ +
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 191 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFF 250
V TY L+ + KAG ++ LL ++V P + ++ + G+ +A +
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 251 SEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVT 304
EM +G PN Y L+ R EA N L M +P D+VT
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP-----DIVT 370
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 21 SLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIR 80
+ IIE K G V++A +F + V+ Y ++ LC+ A L+R+M
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 81 KGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG----RDLLVQGLLNAG 136
G P+ TY L+ A G + + + ++EM GF+ D+L+ G L+
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKS 596
Query: 137 YLE 139
+L+
Sbjct: 597 FLD 599
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 143/292 (48%), Gaps = 4/292 (1%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S +I+ F K G + A +++++ + + Y+SL+ C A + M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
I K P+ TY L+ +C + ++ E E +EMS +G + L+QGL AG
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A+++ KM+ G D+ T++ L++ +CK G++E + ++ + K + D+ TY I+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + KAG +++ + L +L G KP +Y +I G R+G ++A F EMK G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGL----TPISRCFDLVTDG 306
PN Y LI R G +A + EM G + IS +++ DG
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 153/336 (45%), Gaps = 36/336 (10%)
Query: 21 SLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIR 80
+ II+ + V++A+ +F + + V+ YNSL+ LC + A L+ MI
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 81 KGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLES 140
+ P+ T++ L++A+ GK+ EA++ EM + +P + L+ G L+
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 141 AKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIP 200
AK M MI + ++ T+N+LI+ CK+ VE +E++ + + GL + TY LI
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 201 AVSKAGMIDEAFRLLHNLVEDGHKPF---------------------------------P 227
+ +AG D A ++ +V DG P P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 228 SLYA--PIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYL 285
+Y +I+GM + G+ +D + F + +KG PN +YT +I+ R G EA
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 286 VEMTEMGLTPISRCFD-LVTDGLKNCGKHDLAEKIE 320
EM E G P S ++ L+ L++ K AE I+
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 134/294 (45%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T ++ K G +D A+ + K + V++Y +++ ALC K + A L M
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
KG P+ TY L+ C+ G+ +A L +M ++ NP V L+ + G L
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A+++ ++MIK+ D+ T++SLI C ++ M+ + +V TY L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I KA ++E L + + G Y +I+G+F+ G D A F +M G
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK 312
PP+ Y++L+ + G+ +A + + + P ++++ +G+ GK
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 132/298 (44%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I H AV + ++ A CQ + Y +++ LC+ A +L+++M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ D Y +++A C+ + +A EM +KG P V + L++ L N G
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A ++++ MI++ ++ TF++LI+ K G++ ++Y + K + D+ TY L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I +DEA + ++ P Y +IKG + + ++ F EM +G
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
N Y LI + G A +M G+ P + ++ DGL GK + A
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 128/301 (42%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
TLS ++ + + AV + ++ Q + +N+L+ L A ALI RM
Sbjct: 152 TLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 211
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ +G PD TY +VN C G + A L++M V ++ L N +
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A + +M +G ++ T+NSLI +C G + + + + +V T+ L
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I A K G + EA +L +++ P Y+ +I G + D+A F M K
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
PN Y LI + R E EM++ GL + ++ + GL G D+A+K
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 319 I 319
I
Sbjct: 452 I 452
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 114/241 (47%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
YN L+ C A A++ +M++ G+ PD T + L+N +C ++ EA + +M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
+ P + L+ GL A ++++M+ +G DL T+ +++ +CK G+++
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
+ + + K + ADV Y +I A+ +++A L + G +P Y +I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
+ + G++ DA S+M + PN ++ LI + G+ VEA EM + +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 295 P 295
P
Sbjct: 358 P 358
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 125/287 (43%)
Query: 33 VDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAI 92
+D+AV++F + ++ +N LL A+ ++ F +L RM D +Y I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 93 LVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG 152
L+N +C ++ A L +M G+ P + L+ G + + A +V++M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 153 FVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAF 212
+ + TFN+LI + + V + + G D+ TY ++ + K G ID A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 213 RLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMC 272
LL + + + +Y II + +DA F+EM KG PN Y LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
GR+ +A+ L +M E + P F + D GK AEK+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 80/192 (41%)
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
R+ L + +L L+ A + +M++ + + FN L+ I K + + + + +
Sbjct: 48 REKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQ 107
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
L + D+ +Y ILI + + A +L +++ G++P + ++ G +
Sbjct: 108 NLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS 167
Query: 245 DAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVT 304
+A +M + + PN + LI + EA + M G P + V
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 305 DGLKNCGKHDLA 316
+GL G DLA
Sbjct: 228 NGLCKRGDIDLA 239
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 138/316 (43%), Gaps = 2/316 (0%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
MK N+ +SP T +++ G +D A + + A C+ V++Y +L+ +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
F A +++ M +G PD Y L+ + +M EA+ FL EM + G P
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
+ G + A SA + V +M + G + + LI CK G+V Y S+ G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
+ D TY +L+ + K +D+A + + G P Y +I G + G A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
F EM +G PN +Y ML+ R G +A L EM+ GL P + + + DG
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 308 KNCGKHDLAEKIELLE 323
C DLAE L +
Sbjct: 708 --CKSGDLAEAFRLFD 721
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 144/312 (46%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M +S+ T SL+I+ K D A + ++ + +Y+ + + + +
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A AL MI G +P + YA L+ +C +R+ E L EM +
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
+V+G+ ++G L+ A +V +MI G ++ + +LI+T ++ + + + + G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
+ D+ Y LI +SKA +DEA L +VE+G KP Y I G +F A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
+ EM+ G PN+ + T LI + G+ +EA + M + G+ ++ + ++ +GL
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 308 KNCGKHDLAEKI 319
K D AE+I
Sbjct: 603 FKNDKVDDAEEI 614
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 118/260 (45%), Gaps = 2/260 (0%)
Query: 70 GAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLV 129
GA L MI KG VP K TY +L++ C ++ +A+ L EM G + LL+
Sbjct: 260 GALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319
Query: 130 QGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLC 189
GLL ++AK +V++M+ G + ++ I + K G +E ++ + GL
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379
Query: 190 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCF 249
Y LI + + + + LL + + P Y ++KGM G D A+
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 250 FSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKN 309
EM G PN +YT LI + RF +A L EM E G+ P C++ + GL
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 310 CGKHDLAEK--IELLEVSLR 327
+ D A +E++E L+
Sbjct: 500 AKRMDEARSFLVEMVENGLK 519
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
Y+ L+ LC++K A +L+ M G D TY++L++ A+ + EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
G N D + + G +E AK + + MI G + + + SLIE C+ V
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
E+ + K + TY ++ + +G +D A+ ++ ++ G +P +Y +I
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
K + +F DA EMK +G P+ Y LI + R EA ++LVEM E GL
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 295 P 295
P
Sbjct: 520 P 520
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 1/202 (0%)
Query: 76 RRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNA 135
R M+ +G + D +TY +L+N + K+ +A+E +EM KG P V +L+ G
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 136 GYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTY 195
G ++ A + ++M+++G ++ +N L+ C+SGE+E E+ + GL + TY
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 196 KILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKI 255
+I K+G + EAFRL + G P +Y ++ G R + A F K
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK- 759
Query: 256 KGHPPNRPVYTMLITMCGRGGR 277
KG + + LI + G+
Sbjct: 760 KGCASSTAPFNALINWVFKFGK 781
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 133/318 (41%), Gaps = 16/318 (5%)
Query: 15 VSPQTLS--LIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
++P S ++I F K G + A +F++ V++YN LL C A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
L+ M KG P+ TY +++ +C SG + EA EM KG P LV G
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVE-----MYYSVCKLG 187
+E A + K+G FN+LI + K G+ E E M S + G
Sbjct: 743 CRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
DV TY I+I + K G ++ A L H + P Y ++ G + G+ + F
Sbjct: 802 KPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT------PISRCFD 301
F E G P+ +Y+++I + G +A + +M IS C
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 302 LVTDGLKNCGKHDLAEKI 319
L++ G G+ ++AEK+
Sbjct: 921 LLS-GFAKVGEMEVAEKV 937
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 7/285 (2%)
Query: 16 SPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALI 75
+T ++++ K+ VD+A E+F + V Y L+ ++ A ++
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 76 RRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNA 135
M+ +G P+ Y +L+ +C SG++ +A+E L EMS KG +P ++ G +
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 136 GYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTY 195
G L A ++ ++M +G V D + +L++ C+ +VE + + + K G + + +
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI-FGTNKKGCASSTAPF 769
Query: 196 KILIPAVSKAGMIDEAFRLLHNLVEDGH-----KPFPSLYAPIIKGMFRRGQFDDAFCFF 250
LI V K G + +L+ L+ DG KP Y +I + + G + A F
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLM-DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 251 SEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTP 295
+M+ P YT L+ + GR E E G+ P
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 22/302 (7%)
Query: 22 LIIEEFGKHGLVDNAVEVFNKCTAFNC----QQCVLLYNSLLFALCEVKLFHGAYALIRR 77
++ + + G ++ AV VF+ +C +L ++LL + LF Y +
Sbjct: 156 ILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL-RWNRLDLFWDVY---KG 211
Query: 78 MIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGY 137
M+ + V D +TY +L+ A C +G ++ ++ L + ++K F R L V G L
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK-TEKEF----RTATLNVDGAL---- 262
Query: 138 LESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKI 197
++ MI +G V T++ LI+ +CK +E + + LG+ D TY +
Sbjct: 263 -----KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 198 LIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKG 257
LI + K D A L+H +V G P +Y I M + G + A F M G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 258 HPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 317
P Y LI R + LVEM + + + V G+ + G D A
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 318 KI 319
I
Sbjct: 438 NI 439
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 114/263 (43%), Gaps = 30/263 (11%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
++ L LC F A +++ RMI + + P ++ +V R +QEF+ + S
Sbjct: 100 FSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWSSIV---------RCSQEFVGK-S 148
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
D G + G +L G + GY+E A + + + V L L++ + + ++
Sbjct: 149 DDGV---LFG--ILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD 203
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
++Y + + + DV TY +LI A +AG + +L +++ K F + +
Sbjct: 204 LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNV----QLGKDVLFKTEKEFRTATLNV- 258
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
D A M KG P + Y +LI + R +A + LVEM +G++
Sbjct: 259 ---------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVS 309
Query: 295 PISRCFDLVTDGLKNCGKHDLAE 317
+ + L+ DGL D A+
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAK 332
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 13/150 (8%)
Query: 85 PDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQM 144
P+ TY I+++ C G + A+E +M + P V L+ G G +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 145 VNKMIKQGFVLDLETFNSLIETICKSG---------EVEFCVEMYYSVCKLGLCADVSTY 195
++ I G D ++ +I K G + F CKL +ST
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLS----ISTC 918
Query: 196 KILIPAVSKAGMIDEAFRLLHNLVEDGHKP 225
+ L+ +K G ++ A +++ N+V + P
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 21 SLIIEEFGKHGLVDNAVEVFNKCTAFN-----CQQCVLLYNSLLFALCEVKLFHGAYALI 75
S+II F K G+ A+ + ++ A N C+ + +LL +V A ++
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Query: 76 RRMIRKGFVPDKRTYAILVNAWCSSGKMR 104
M+R ++PD T L+N C S R
Sbjct: 939 ENMVRLQYIPDSATVIELINESCISSNQR 967
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 140/280 (50%), Gaps = 3/280 (1%)
Query: 18 QTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRR 77
+T +++I G + A+E+ + F C+ ++ YN+L+ C+ + A + +
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD 266
Query: 78 MIRKGFV--PDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNA 135
++ G V PD TY +++ +C +GKMREA L +M G P ++LV G A
Sbjct: 267 -VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 136 GYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTY 195
G + +A+++ KMI G D+ TF SLI+ C+ G+V ++ + G+ + TY
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 196 KILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKI 255
ILI A+ + +A LL L P P +Y P+I G + G+ ++A EM+
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 256 KGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTP 295
K P++ +T+LI GR EA + +M +G +P
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 142/316 (44%), Gaps = 5/316 (1%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV 65
E MK +S + + L ++ F + G + A + + +F + C ++ NSLL L ++
Sbjct: 127 ECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ--SFEVEGCCMVVNSLLNTLVKL 184
Query: 66 KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGR 125
A L +R D +T+ IL+ C GK +A E L MS G P +
Sbjct: 185 DRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTY 244
Query: 126 DLLVQGLLNAGYLESAKQMVNKMIKQGFVL--DLETFNSLIETICKSGEVEFCVEMYYSV 183
+ L+QG + L A +M K +K G V D+ T+ S+I CK+G++ + +
Sbjct: 245 NTLIQGFCKSNELNKASEMF-KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 184 CKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQF 243
+LG+ T+ +L+ +KAG + A + ++ G P + +I G R GQ
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 244 DDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLV 303
F + EM +G PN Y++LI R ++A L ++ + P ++ V
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPV 423
Query: 304 TDGLKNCGKHDLAEKI 319
DG GK + A I
Sbjct: 424 IDGFCKAGKVNEANVI 439
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 96/196 (48%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +++++ + K G + A E+ K +F C V+ + SL+ C V + L M
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+G P+ TY+IL+NA C+ ++ +A+E L +++ K P + ++ G AG +
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A +V +M K+ D TF LI C G + V +++ + +G D T L
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 199 IPAVSKAGMIDEAFRL 214
+ + KAGM EA+ L
Sbjct: 494 LSCLLKAGMAKEAYHL 509
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 17 PQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIR 76
P + +I+ F K G V+ A + + C+ + + L+ C A ++
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 77 RMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKG 117
+M+ G PDK T + L++ +G +EA L +++ KG
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKG 516
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 151/312 (48%), Gaps = 2/312 (0%)
Query: 1 MWKTIELMKPYNLS-VSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLL 59
+W IE M+ N + P+ ++++ F +V A+EV ++ F + ++ LL
Sbjct: 166 VWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLL 225
Query: 60 FALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFN 119
ALC+ A L M R F + R + L+ WC GKM EA+ L +M++ GF
Sbjct: 226 DALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFE 284
Query: 120 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEM 179
P + L+ G NAG + A ++ M ++GF + + LI+ +CK +E +++
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
Query: 180 YYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFR 239
+ + + ADV TY L+ K G ID+ + +L ++++ G P Y I+ +
Sbjct: 345 FVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEK 404
Query: 240 RGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRC 299
+ F++ +M+ + P+ +Y ++I + + G EA EM E GL+P
Sbjct: 405 KESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDT 464
Query: 300 FDLVTDGLKNCG 311
F ++ +GL + G
Sbjct: 465 FVIMINGLASQG 476
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 3/233 (1%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ Y T + ++ F K G +D V + L Y ++ A + +
Sbjct: 348 MERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKES 407
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
F L+ +M + + PD Y +++ C G+++EA EM + G +P V +
Sbjct: 408 FEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVI 467
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGF--VLDLETFNSLIETICKSGEVEFCVEMYYSVCK 185
++ GL + G L A +M+ +G V T L+ T+ K ++E +++ +
Sbjct: 468 MINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITS 527
Query: 186 LGLCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGM 237
G C +V ++ I I A+ G EA ++E P P +A ++KG+
Sbjct: 528 KGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGL 580
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 197 ILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIK 256
+L+ + A M+ +A +L + + G +P ++ ++ + + G DA F +M+++
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR 247
Query: 257 GHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
P N +T L+ R G+ +EA LV+M E G P + + G N GK +A
Sbjct: 248 -FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGK--MA 304
Query: 317 EKIELL 322
+ +LL
Sbjct: 305 DAYDLL 310
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 146/309 (47%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
+K + ++ + +I+ FGK G+V+ + V+ K + + YN L+ L
Sbjct: 178 IKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMF 237
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A + M PD TY ++ +C +G+ ++A E L++M +G
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
++Q S + +M ++G + F+ +I +CK G++ ++ ++ + G
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
+V+ Y +LI +K+G +++A RLLH ++++G KP Y+ ++ G+ + G+ ++A
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
+F + G N Y+ LI G+ GR EA EM+E G T S C++ + D
Sbjct: 418 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 308 KNCGKHDLA 316
K D A
Sbjct: 478 TKHRKVDEA 486
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 140/313 (44%), Gaps = 2/313 (0%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M + V P SL+I K G ++ VF + V +Y L+ +
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A L+ RMI +GF PD TY+++VN C +G++ EA ++ G
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L+ GL AG ++ A+++ +M ++G D +N+LI+ K +V+ + ++ + +
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Query: 188 LCAD-VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDA 246
C V TY IL+ + K +EA +L +++ G P + + + G+ G+ A
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Query: 247 FCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDG 306
E+ G + M+ T+C + GR EA +TE G R ++ +
Sbjct: 558 CKILDELAPMGVILDAACEDMINTLC-KAGRIKEACKLADGITERGREVPGRIRTVMINA 616
Query: 307 LKNCGKHDLAEKI 319
L+ GK DLA K+
Sbjct: 617 LRKVGKADLAMKL 629
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 149/350 (42%), Gaps = 40/350 (11%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
MK + + T + ++ VD+A VF + + ++ YN+++ C+
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A +R M +G DK TY ++ A + QEM +KG P L
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 128 LVQGL-----LNAGY------------------------------LESAKQMVNKMIKQG 152
++ GL LN GY +E A +++++MI +G
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 153 FVLDLETFNSLIETICKSGEVEFCVEMYYSVCKL-GLCADVSTYKILIPAVSKAGMIDEA 211
F D+ T++ ++ +CK+G VE ++ Y+ C+ GL + Y LI + KAG +DEA
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALD-YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 212 FRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITM 271
RL + E G Y +I + + D+A F M+ + ++ VYT I +
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME-EEEGCDQTVYTYTILL 510
Query: 272 CG--RGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
G + R EA M + G+TP + CF ++ GL GK A KI
Sbjct: 511 SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKI 560
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 126/287 (43%)
Query: 33 VDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAI 92
VD V ++ F V N+L+ + ++ + + R+M G P TY
Sbjct: 168 VDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 227
Query: 93 LVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG 152
L+N S+ + A+ + M P + + +++G AG + A + + M +G
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287
Query: 153 FVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAF 212
D T+ ++I+ + CV +Y + + G+ + ++I + K G ++E +
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGY 347
Query: 213 RLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMC 272
+ N++ G KP ++Y +I G + G +DA M +G P+ Y++++
Sbjct: 348 TVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGL 407
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
+ GR EA +Y GL S + + DGL G+ D AE++
Sbjct: 408 CKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 2/218 (0%)
Query: 13 LSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
L+++ S +I+ GK G VD A +F + + C + YN+L+ A + + A
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 487
Query: 73 ALIRRMIRK-GFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQG 131
AL +RM + G TY IL++ + EA + M DKG P L G
Sbjct: 488 ALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTG 547
Query: 132 LLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCAD 191
L +G + A ++++++ G +LD +I T+CK+G ++ ++ + + G
Sbjct: 548 LCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERGREVP 606
Query: 192 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSL 229
++I A+ K G D A +L+H+ + G++ S+
Sbjct: 607 GRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSV 644
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
LV L A ++ + + +++ K F + + N+LI++ K G VE + ++ + + G
Sbjct: 158 LVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENG 217
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
+ + TY L+ + A +D A R+ + KP Y +IKG + GQ A
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
+M+ +GH ++ Y +I C F EM E G+ F LV GL
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 308 KNCGKHDLAEKIELLEVSLR 327
C + L E + E +R
Sbjct: 338 --CKEGKLNEGYTVFENMIR 355
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 70/184 (38%), Gaps = 40/184 (21%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFN-CQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRK 81
+I+ F KH VD A+ +F + C Q V Y LL + + A L MI K
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 532
Query: 82 GFVPDKRTYAIL----------------------------------VNAWCSSGKMREAQ 107
G P + L +N C +G+++EA
Sbjct: 533 GITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEAC 592
Query: 108 EFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI-----KQGFVLDLETFNS 162
+ ++++G P R R +++ L G + A ++++ I + G V F +
Sbjct: 593 KLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTT 652
Query: 163 LIET 166
L+ET
Sbjct: 653 LLET 656
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 129/259 (49%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I+ K G +D+A E+ ++ Q + YNS++ LC+ A L+
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
G D TY L++A+C SG+M +AQE L+EM KG P + ++L+ G G L
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
E ++++N M+ +G + TFNSL++ C ++ +Y +C G+ D TY+ L
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
+ KA + EA+ L + G S Y+ +IKG +R +F +A F +M+ +G
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 259 PPNRPVYTMLITMCGRGGR 277
++ ++ +G R
Sbjct: 698 AADKEIFDFFSDTKYKGKR 716
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 146/310 (47%), Gaps = 6/310 (1%)
Query: 17 PQTL--SLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYAL 74
P T+ + +I+ F K G + A + F + + + VL Y +++ C++ A L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 75 IRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLN 134
M KG PD T+ L+N +C +G M++A M G +P V L+ GL
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 135 AGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVST 194
G L+SA +++++M K G ++ T+NS++ +CKSG +E V++ GL AD T
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 195 YKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMK 254
Y L+ A K+G +D+A +L ++ G +P + ++ G G +D + M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 255 IKGHPPNRPVYTMLITM-CGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKH 313
KG PN + L+ C R A Y +M G+ P + ++ + G +C
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIY-KDMCSRGVGPDGKTYENLVKG--HCKAR 645
Query: 314 DLAEKIELLE 323
++ E L +
Sbjct: 646 NMKEAWFLFQ 655
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 134/301 (44%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
+ S ++ + + G +D ++ + +Y S++ LC + A M
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
IR+G +PD Y L++ +C G +R A +F EM + P V ++ G G +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A ++ ++M +G D TF LI CK+G ++ ++ + + G +V TY L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + K G +D A LLH + + G +P Y I+ G+ + G ++A E + G
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
+ YT L+ + G +A L EM GL P F+++ +G G + EK
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 319 I 319
+
Sbjct: 583 L 583
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%)
Query: 52 VLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQ 111
V+ Y++++ C + LI M RKG P+ Y ++ C K+ EA+E
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 112 EMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSG 171
EM +G P L+ G G + +A + +M + D+ T+ ++I C+ G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 172 EVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYA 231
++ ++++ + GL D T+ LI KAG + +AFR+ +++++ G P Y
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 232 PIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEM 291
+I G+ + G D A EM G PN Y ++ + G EA + E
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 292 GLTPISRCFDLVTDGLKNCGKHDLAEKI 319
GL + + + D G+ D A++I
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 141/333 (42%), Gaps = 35/333 (10%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M +++ T + II F + G + A ++F++ + + + L+ C+
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A+ + MI+ G P+ TY L++ C G + A E L EM G P + +
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
+V GL +G +E A ++V + G D T+ +L++ CKSGE++ E+ + G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKP----FPSL-------------- 229
L + T+ +L+ GM+++ +LL+ ++ G P F SL
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 230 -----------------YAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMC 272
Y ++KG + +A+ F EMK KG + Y++LI
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTD 305
+ +F+EA +M GL FD +D
Sbjct: 677 LKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 139/344 (40%), Gaps = 40/344 (11%)
Query: 16 SPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALI 75
P+ + + GL+ A VF K + V N L L + + A A+I
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATAII 232
Query: 76 --RRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLL 133
R G + +Y I+++ C G+++EA L M KG+ P V +V G
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 134 NAGYLE-----------------------------------SAKQMVNKMIKQGFVLDLE 158
G L+ A++ ++MI+QG + D
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 159 TFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNL 218
+ +LI+ CK G++ + +Y + + DV TY +I + G + EA +L H +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 219 VEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRF 278
G +P + +I G + G DAF + M G PN YT LI + G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 279 VEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELL 322
A L EM ++GL P ++ + +GL C ++ E ++L+
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGL--CKSGNIEEAVKLV 514
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 91/209 (43%)
Query: 13 LSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
L+ T + +++ + K G +D A E+ + Q ++ +N L+ C +
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
L+ M+ KG P+ T+ LV +C ++ A ++M +G P + + LV+G
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
A ++ A + +M +GF + + T++ LI+ K + E++ + + GL AD
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVED 221
+ K D + ++E+
Sbjct: 702 EIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 142/292 (48%), Gaps = 6/292 (2%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV----KLFHGAYAL 74
T +++I K G ++ A +V + C V+ YN+L+ C++ K++ A A+
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK-ADAV 283
Query: 75 IRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLN 134
++ M+ P+ T+ IL++ + + + + +EM D+ P V + L+ GL N
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 135 AGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVST 194
G + A M +KM+ G +L T+N+LI CK+ ++ ++M+ SV G
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 195 YKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMK 254
Y +LI A K G ID+ F L + +G P Y +I G+ R G + A F ++
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 255 IKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDG 306
KG P + ++ C R G +AA L EM++MGL P +++V G
Sbjct: 464 SKGLPDLVTFHILMEGYC-RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 146/300 (48%), Gaps = 4/300 (1%)
Query: 15 VSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
VSP T +++I+ F K + +++VF + + + V+ YNSL+ LC A
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
++ +M+ G P+ TY L+N +C + ++EA + + +G P R ++L+
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
G ++ + +M ++G V D+ T+N LI +C++G +E +++ + GL D+
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDL 470
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSE 252
T+ IL+ + G +A LL + + G KP Y ++KG + G A ++
Sbjct: 471 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530
Query: 253 M-KIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCG 311
M K + N Y +L+ + G+ +A L EM E GL P +++V + + + G
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 138/311 (44%), Gaps = 3/311 (0%)
Query: 12 NLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGA 71
N+ V+ +++ + + + E F + + + L L+ AL +
Sbjct: 148 NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADV 207
Query: 72 YALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQG 131
+ + MIR+ P+ T+ +++NA C +GKM +A++ +++M G +P V + L+ G
Sbjct: 208 EYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDG 267
Query: 132 ---LLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGL 188
L G + A ++ +M++ +L TFN LI+ K + ++++ + +
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327
Query: 189 CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFC 248
+V +Y LI + G I EA + +V G +P Y +I G + +A
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 249 FFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLK 308
F +K +G P +Y MLI + G+ + EM G+ P ++ + GL
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 309 NCGKHDLAEKI 319
G + A+K+
Sbjct: 448 RNGNIEAAKKL 458
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I ++G ++ A ++F++ T+ V ++ L+ C A L++ M
Sbjct: 438 TYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVT-FHILMEGYCRKGESRKAAMLLKEM 496
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS-DKGFNPPVRGRDLLVQGLLNAGY 137
+ G P TY I++ +C G ++ A +M ++ V ++L+QG G
Sbjct: 497 SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Query: 138 LESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEV 173
LE A ++N+M+++G V + T+ + E + G V
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 16/73 (21%)
Query: 52 VLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQ 111
V YN LL + A L+ M+ KG VP++ TY I+ +
Sbjct: 541 VASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVK----------------E 584
Query: 112 EMSDKGFNPPVRG 124
EM D+GF P + G
Sbjct: 585 EMVDQGFVPDIEG 597
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%)
Query: 13 LSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
S S +S ++E K G ++ A+ + + F + +YN+L+ +LC+ + FH A
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
L RM + G P+ TY+IL++ +C GK+ A FL EM D G V + L+ G
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
G + +A+ + +MI + + T+ SL+ C G++ + +Y+ + G+ +
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSE 252
T+ L+ + +AG+I +A +L + + E KP Y +I+G G AF F E
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 253 MKIKGHPPNRPVYTMLITMCGRGGRFVEAANYL 285
M KG P+ Y LI G+ EA ++
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 135/345 (39%), Gaps = 35/345 (10%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M L + T S++I+ F + G +D A+ + + V YNSL+ C+
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A + MI K P TY L+ +CS GK+ +A EM+ KG P +
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L+ GL AG + A ++ N+M + + T+N +IE C+ G++ E + + G
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDA- 246
+ D +Y+ LI + G EA + L + + Y ++ G R G+ ++A
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 247 ----------------------------------FCFFSEMKIKGHPPNRPVYTMLITMC 272
F EM +G P+ +YT +I
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 317
+ G F EA M G P + V +GL G + AE
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 146/349 (41%), Gaps = 37/349 (10%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M ++ S T + ++ + GL+ +AV++FN+ +N + + YN ++ CE
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A+ ++ M KG VPD +Y L++ C +G+ EA+ F+ +
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L+ G G LE A + +M+++G LDL + LI+ K + + + + G
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
L D Y +I A SK G EAF + ++ +G P Y +I G+ + G ++A
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 248 CFFSEMK-----------------------------------IKGHPPNRPVYTMLITMC 272
S+M+ +KG N Y MLI
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEL 321
R GR EA+ + M G++P C T + C ++D+ + IEL
Sbjct: 798 CRQGRIEEASELITRMIGDGVSP--DCITYTTMINELCRRNDVKKAIEL 844
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 134/338 (39%), Gaps = 35/338 (10%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
I M+ V+ +++I+ K V AV + + + V+ Y +L++ LC+
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 65 VKLF-----------------------------------HGAYALIRRMIRKGFVPDKRT 89
V+ F A L++R++ G P+
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 90 YAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI 149
Y L+++ C K EA+ M G P +L+ G L++A + +M+
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 150 KQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMID 209
G L + +NSLI CK G++ + L V TY L+ G I+
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 210 EAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLI 269
+A RL H + G P + ++ G+FR G DA F+EM PNR Y ++I
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 270 TMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
G +A +L EMTE G+ P + + + GL
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 120/279 (43%)
Query: 33 VDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAI 92
+ A E+ A C ++ YN L+ LC+ + A + + + K PD TY
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 93 LVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG 152
LV C + E + EM F+P LV+GL G +E A +V +++ G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 153 FVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAF 212
+L +N+LI+++CK + ++ + K+GL + TY ILI + G +D A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 213 RLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMC 272
L +V+ G K Y +I G + G A F +EM K P YT L+
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCG 311
G+ +A EMT G+ P F + GL G
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 7/232 (3%)
Query: 66 KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGR 125
KLF G L++ M +G PD Y +++A +G +EA M ++G P
Sbjct: 664 KLFFG---LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 126 DLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEF--CVEMYYSV 183
++ GL AG++ A+ + +KM V + T+ ++ + K GEV+ VE++ ++
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAI 779
Query: 184 CKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQF 243
K GL A+ +TY +LI + G I+EA L+ ++ DG P Y +I + RR
Sbjct: 780 LK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 244 DDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTP 295
A ++ M KG P+R Y LI C G +A EM GL P
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 131/302 (43%)
Query: 18 QTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRR 77
+TLS ++ K A+E+FN + + V +Y ++ +LCE+K A +I
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 78 MIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGY 137
M G + Y +L++ C K+ EA ++++ K P V LV GL
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 138 LESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKI 197
E +M+++M+ F +SL+E + K G++E + + V G+ ++ Y
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 198 LIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKG 257
LI ++ K EA L + + G +P Y+ +I RRG+ D A F EM G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 258 HPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 317
+ Y LI + G A ++ EM L P + + G + GK + A
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 318 KI 319
++
Sbjct: 493 RL 494
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 8/213 (3%)
Query: 53 LLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQE 112
++Y S++ A + F A+ + MI +G VP++ TY ++N C +G + EA+ +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 113 MSDKGFNPPVRGR----DLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETIC 168
M P D+L +G ++ ++ A ++ N ++K G + + T+N LI C
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVD---MQKAVELHNAILK-GLLANTATYNMLIRGFC 798
Query: 169 KSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPS 228
+ G +E E+ + G+ D TY +I + + + +A L +++ E G +P
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 229 LYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPN 261
Y +I G G+ A +EM +G PN
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 1/244 (0%)
Query: 74 LIRRMIRK-GFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
+ + MI K +P+ RT + L++ A E +M G P V +++ L
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL 237
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
L AK+M+ M G +++ +N LI+ +CK +V V + + L DV
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSE 252
TY L+ + K + ++ ++ P + + +++G+ +RG+ ++A
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKR 357
Query: 253 MKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK 312
+ G PN VY LI +G +F EA M ++GL P + ++ D GK
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 313 HDLA 316
D A
Sbjct: 418 LDTA 421
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
YN L+ C A LI RMI G PD TY ++N C +++A E M+
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLET 159
+KG P + L+ G AG + A ++ N+M++QG + + +T
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I K G V+ A + +K + + Y L L + ++ +
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
I KG + + TY +L+ +C G++ EA E + M G +P ++ L +
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYK 196
+ A ++ N M ++G D +N+LI C +GE+ E+ + + GL + T +
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 1 MWKTIELMKPY--NLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSL 58
M K +EL L + T +++I F + G ++ A E+ + + Y ++
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 59 LFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGF 118
+ LC A L M KG PD+ Y L++ C +G+M +A E EM +G
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Query: 119 NP 120
P
Sbjct: 889 IP 890
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 142/291 (48%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I+ F K G + A ++F++ + ++ YNSL+ C A + M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ K +PD TY L+N +C + K+ + E ++MS +G L+ G A
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
++A+ + +M+ G ++ T+N+L++ +CK+G++E + ++ + K + D+ TY I+
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
+ KAG +++ + L +L G KP Y +I G ++G ++A+ F +MK G
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKN 309
P+ Y LI R G +A + EM + + LVTD L +
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD 602
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 134/287 (46%)
Query: 21 SLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIR 80
S +I+ K+ VD+A+ +F + + V Y+SL+ LC + A L+ M+
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 81 KGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLES 140
+ P+ T+ L++A+ GK+ EA++ EM + +P + + L+ G L+
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 141 AKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIP 200
A+Q+ M+ + + D+ T+N+LI CK+ +V +E++ + + GL + TY LI
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 201 AVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPP 260
+A D A + +V DG P Y ++ G+ + G+ + A F ++ P
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 261 NRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
+ Y ++ + G+ + + ++ G+ P ++ + G
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 2/264 (0%)
Query: 14 SVSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGA 71
S+ P T + +I F H +D A ++F + +C V+ YN+L+ C+ K
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 72 YALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQG 131
L R M R+G V + TY L++ + + AQ ++M G +P + + L+ G
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 132 LLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCAD 191
L G LE A + + K D+ T+N + E +CK+G+VE +++ S+ G+ D
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 192 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFS 251
V Y +I K G+ +EA+ L + EDG P Y +I+ R G +
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 579
Query: 252 EMKIKGHPPNRPVYTMLITMCGRG 275
EM+ + Y ++ M G
Sbjct: 580 EMRSCRFAGDASTYGLVTDMLHDG 603
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 133/294 (45%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +I K G D A+ + NK + V++Y++++ +LC+ + A L M
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
KG PD TY+ L++ C+ G+ +A L +M ++ NP V + L+ G L
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A+++ ++MI++ ++ T+NSLI C ++ +++ + DV TY L
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I KA + + L ++ G Y +I G F+ D+A F +M G
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK 312
PN Y L+ + G+ +A + + + P ++++++G+ GK
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 126/271 (46%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
YN ++ LC A A++ +M++ G+ P T L+N +C ++ EA + +M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
+ G+ P LV GL A +V +M+ +G DL T+ ++I +CK GE +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
+ + + K + ADV Y +I ++ K +D+A L + G +P Y+ +I
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
+ G++ DA S+M + PN + LI + G+ +EA EM + +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 295 PISRCFDLVTDGLKNCGKHDLAEKIELLEVS 325
P ++ + +G + D A++I L VS
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 140/299 (46%), Gaps = 2/299 (0%)
Query: 30 HGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRT 89
H +D AV++F + ++ ++ LL A+ ++K F + +M G + T
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 90 YAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI 149
Y I++N C ++ A L +M G+ P + + L+ G + + A +V++M+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 150 KQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMID 209
+ G+ D TF +L+ + + + V + + G D+ TY +I + K G D
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 210 EAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLI 269
A LL+ + + + +Y+ +I + + DDA F+EM KG P+ Y+ LI
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 270 TMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI--ELLEVSL 326
+ GR+ +A+ L +M E + P F+ + D GK AEK+ E+++ S+
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 2/317 (0%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV 65
E M+ +S + T +++I + + A+ + K ++ NSLL C
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 66 KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGR 125
A AL+ +M+ G+ PD T+ LV+ K EA ++ M KG P +
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 126 DLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCK 185
++ GL G + A ++NKM K D+ ++++I+++CK V+ + ++ +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 186 LGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDD 245
G+ DV TY LI + G +A RLL +++E P + +I + G+ +
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 246 AFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTD 305
A F EM + PN Y LI R EA M P ++ + +
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 306 GLKNCGKHDLAEKIELL 322
G C + + +EL
Sbjct: 389 GF--CKAKKVVDGMELF 403
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 124/301 (41%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
TL+ ++ F + AV + ++ Q + + +L+ L + A AL+ RM
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ KG PD TY ++N C G+ A L +M V ++ L ++
Sbjct: 197 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV 256
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A + +M +G D+ T++SLI +C G + + + + +V T+ L
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I A +K G + EA +L +++ P Y +I G + D+A F+ M K
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
P+ Y LI + + V+ +M+ GL + + + G D A+
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 319 I 319
+
Sbjct: 437 V 437
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 142/303 (46%), Gaps = 2/303 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + II K G+VD A E+ C+ V+ YN LL AL + L+ +M
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ P+ TY+IL+ C GK+ EA L+ M +KG P D L+ G L
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A + + MI G + D+ +N+++ T+CK+G+ + +E++ + ++G + S+Y +
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
A+ +G A ++ ++ +G P Y +I + R G D+AF +M+
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
P+ Y +++ + R +A N L M G P + ++ +G+ G AE
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR--AEA 562
Query: 319 IEL 321
+EL
Sbjct: 563 MEL 565
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 131/271 (48%)
Query: 49 QQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQE 108
Q V YN+L+ C++ A ++ RM K F PD TY I++ + CS GK+ A +
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 109 FLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETIC 168
L ++ P V +L++ + G ++ A +++++M+ +G D+ T+N++I +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 169 KSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPS 228
K G V+ EM ++ G DV +Y IL+ A+ G +E +L+ + + P
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 229 LYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEM 288
Y+ +I + R G+ ++A MK KG P+ Y LI R GR A +L M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 289 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
G P ++ V L GK D A +I
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 140/305 (45%), Gaps = 2/305 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +++IE G VD A+++ ++ + + + YN+++ +C+ + A+ ++R +
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
KG PD +Y IL+ A + GK E ++ + +M + +P V +L+ L G +
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 349
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
E A ++ M ++G D +++ LI C+ G ++ +E ++ G D+ Y +
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 409
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
+ + K G D+A + L E G P S Y + ++ G A EM G
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
P+ Y +I+ R G EA LV+M P +++V G C H + +
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF--CKAHRIEDA 527
Query: 319 IELLE 323
I +LE
Sbjct: 528 INVLE 532
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 148/341 (43%), Gaps = 38/341 (11%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALC------------------- 63
+I F K +D+A V ++ + + + YN ++ +LC
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 64 ------------EVKLFHG----AYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQ 107
E + G A L+ M+ +G PD TY ++ C G + A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 108 EFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETI 167
E ++ + KG P V ++L++ LLN G E ++++ KM + ++ T++ LI T+
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 168 CKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFP 227
C+ G++E + + + + GL D +Y LI A + G +D A L ++ DG P
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 228 SLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVE 287
Y ++ + + G+ D A F ++ G PN Y + + G + A + ++E
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 288 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELLEVSLRS 328
M G+ P ++ + L C + + E ELL V +RS
Sbjct: 464 MMSNGIDPDEITYNSMISCL--CREGMVDEAFELL-VDMRS 501
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 45/303 (14%)
Query: 65 VKLFH-----GAYA----LIRRMIRKGF-------------------------------- 83
+K+FH G Y L+ M+RKG+
Sbjct: 93 LKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK 152
Query: 84 --VPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESA 141
PD Y L+N +C ++ +A L M K F+P ++++ L + G L+ A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 142 KQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPA 201
+++N+++ + T+ LIE G V+ +++ + GL D+ TY +I
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 202 VSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPN 261
+ K GM+D AF ++ NL G +P Y +++ + +G++++ ++M + PN
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 262 RPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEL 321
Y++LIT R G+ EA N L M E GLTP + +D + G+ D+A IE
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA--IEF 390
Query: 322 LEV 324
LE
Sbjct: 391 LET 393
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 10/235 (4%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
++LMK L+ + +I F + G +D A+E + C ++ YN++L LC+
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 65 VKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG 124
A + ++ G P+ +Y + +A SSG A + EM G +P
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEIT 475
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
+ ++ L G ++ A +++ M F + T+N ++ CK+ +E + + S+
Sbjct: 476 YNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE-DG---------HKPFPSL 229
G + +TY +LI + AG EA L ++LV D H+ FP L
Sbjct: 536 GNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPLL 590
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 145/314 (46%), Gaps = 8/314 (2%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
++ MK S +I + + GL + AVE+F + F C V +YN +L L
Sbjct: 99 LQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG 158
Query: 65 VKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG 124
Y + R M R GF P+ TY +L+ A C + K+ A++ L EMS+KG P
Sbjct: 159 ENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVS 218
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
++ + G ++ +++ + F + +N+LI +CK + + E+ +
Sbjct: 219 YTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALINGLCKEHDYKGAFELMREMV 273
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
+ G+ +V +Y LI + +G I+ AF L +++ G P + ++KG F RG
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333
Query: 245 DAFCFFSEMKIKGH--PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDL 302
DA +++M I+G PN Y L+ G V+A + M E+G +P R +
Sbjct: 334 DALDLWNQM-IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGS 392
Query: 303 VTDGLKNCGKHDLA 316
+ +G G D A
Sbjct: 393 LINGFAKRGSLDGA 406
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 137/303 (45%), Gaps = 39/303 (12%)
Query: 52 VLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQ 111
V +YN+L+ LC+ + GA+ L+R M+ KG P+ +Y+ L+N C+SG++ A FL
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT 305
Query: 112 EMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVL--DLETFNSLIETICK 169
+M +G +P + LV+G G A + N+MI+ GF L ++ +N+L++ C
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR-GFGLQPNVVAYNTLVQGFCS 364
Query: 170 SGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDG------- 222
G + V ++ + ++G ++ TY LI +K G +D A + + ++ G
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 223 ----------HKPF----------------PSL--YAPIIKGMFRRGQFDDAFCFFSEMK 254
H F PS+ + IKG+ G+ D A F +M+
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 255 IKGH-PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKH 313
+ PPN Y L+ + R EA E+ G+ S ++ + G N G
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 314 DLA 316
+A
Sbjct: 545 GIA 547
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 115/247 (46%), Gaps = 3/247 (1%)
Query: 1 MWKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLF 60
+W ++++ + L + + +++ F HG + AV VF+ C + Y SL+
Sbjct: 338 LWN--QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 61 ALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNP 120
+ GA + +M+ G P+ Y +V A C K +EA+ ++ MS + P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 121 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFV-LDLETFNSLIETICKSGEVEFCVEM 179
V + ++GL +AG L+ A+++ +M +Q ++ T+N L++ + K+ +E +
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 180 YYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFR 239
+ G+ STY L+ AG+ A +L+ ++ DG P II +
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 240 RGQFDDA 246
+G+ + A
Sbjct: 576 QGKAERA 582
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 2/269 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNK-CTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRR 77
TLS +++ G +A++++N+ F Q V+ YN+L+ C A ++
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH 377
Query: 78 MIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGY 137
M G P+ RTY L+N + G + A +M G P V +V+ L
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 138 LESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCA-DVSTYK 196
+ A+ ++ M K+ + TFN+ I+ +C +G +++ +++ + + C ++ TY
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497
Query: 197 ILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIK 256
L+ ++KA I+EA+ L + G + S Y ++ G G A +M +
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Query: 257 GHPPNRPVYTMLITMCGRGGRFVEAANYL 285
G P+ M+I + G+ AA L
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQML 586
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 5/222 (2%)
Query: 74 LIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLL 133
L+++M +GF + + +++ + G A E + + G +P V+ + ++ LL
Sbjct: 98 LLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLL 157
Query: 134 NAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVS 193
++ + M + GF ++ T+N L++ +CK+ +V+ ++ + G C D
Sbjct: 158 GENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAV 217
Query: 194 TYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEM 253
+Y +I ++ + G++ E L +P S+Y +I G+ + + AF EM
Sbjct: 218 SYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREM 272
Query: 254 KIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTP 295
KG PN Y+ LI + G+ A ++L +M + G P
Sbjct: 273 VEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 38/266 (14%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ S + +T +I F K G +D AV ++NK C V++Y +++ ALC
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPP------ 121
F A +LI M ++ P T+ + C +G++ A++ ++M + PP
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497
Query: 122 -----------------------VRG-------RDLLVQGLLNAGYLESAKQMVNKMIKQ 151
+RG + L+ G NAG A Q+V KM+
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Query: 152 GFVLDLETFNSLIETICKSGEVEFCVEM--YYSVCKLGLCADVSTYKILIPAVSKAGMID 209
G D T N +I CK G+ E +M S + DV +Y +I + ++ +
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRE 617
Query: 210 EAFRLLHNLVEDGHKPFPSLYAPIIK 235
+ LL ++ G P + ++ +I
Sbjct: 618 DGVILLERMISAGIVPSIATWSVLIN 643
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 126 DLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCK 185
+++++ L G ++S + ++ +M QGF + F S+I + G E VEM+Y + +
Sbjct: 80 EVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKE 139
Query: 186 LGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDD 245
G V Y ++ + I + + ++ DG +P Y ++K + + + D
Sbjct: 140 FGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDG 199
Query: 246 AFCFFSEMKIKGHPPNRPVYTMLI-TMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVT 304
A EM KG P+ YT +I +MC G V+ L E E P+ ++ +
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMCEVG--LVKEGRELAERFE----PVVSVYNALI 253
Query: 305 DGLKNCGKHDLAEKIELL 322
+GL C +HD EL+
Sbjct: 254 NGL--CKEHDYKGAFELM 269
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 3/198 (1%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKC-TAFNCQQCVLLYNSLLFALC 63
IE+M N + S T + I+ G +D A +VF + C ++ YN LL L
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLA 504
Query: 64 EVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVR 123
+ AY L R + +G TY L++ C++G A + + +M G +P
Sbjct: 505 KANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEI 564
Query: 124 GRDLLVQGLLNAGYLESAKQMVNKMI--KQGFVLDLETFNSLIETICKSGEVEFCVEMYY 181
++++ G E A QM++ + ++ + D+ ++ ++I +C+S E V +
Sbjct: 565 TMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLE 624
Query: 182 SVCKLGLCADVSTYKILI 199
+ G+ ++T+ +LI
Sbjct: 625 RMISAGIVPSIATWSVLI 642
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFN--KCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIR 76
T+++II + K G + A ++ + C + V+ Y ++++ LC L+
Sbjct: 565 TMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLE 624
Query: 77 RMIRKGFVPDKRTYAILVNAWCSSGKMREAQEF 109
RMI G VP T+++L+N + +R +F
Sbjct: 625 RMISAGIVPSIATWSVLINCFILDDIVRAHDQF 657
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 143/297 (48%), Gaps = 2/297 (0%)
Query: 15 VSPQTL--SLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
++P + S +I+ F K G + A E+ + + Y SL+ C+ A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
++ M+ KG P+ RT+ IL+N +C + + + E ++MS +G + L+QG
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
G LE AK++ +M+ + D+ ++ L++ +C +GE E +E++ + K + D+
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSE 252
Y I+I + A +D+A+ L +L G KP Y +I G+ ++G +A F +
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 253 MKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKN 309
M+ GH PN Y +LI G ++A + E+ G + + +V D L +
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 154/351 (43%), Gaps = 37/351 (10%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ + + S+II+ K G +DNA +FN+ + +++Y +L+ C
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
+ L+R MI++ PD ++ L++ + GK+REA+E +EM +G +P
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L+ G L+ A M++ M+ +G ++ TFN LI CK+ ++ +E++ + G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE------------------DGHKPFPSL 229
+ AD TY LI + G ++ A L +V D +P +L
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 230 -----------------YAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMC 272
Y II GM + DDA+ F + +KG P+ Y ++I
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELLE 323
+ G EA +M E G +P ++++ + G+ D + +L+E
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA--HLGEGDATKSAKLIE 586
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 2/263 (0%)
Query: 15 VSPQTLSL--IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
+SP T++ +I+ F K +D A + + + C + +N L+ C+ L
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
L R+M +G V D TY L+ +C GK+ A+E QEM + P + +L+ GL
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
+ G E A ++ K+ K LD+ +N +I +C + +V+ +++ S+ G+ DV
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSE 252
TY I+I + K G + EA L + EDGH P Y +I+ G + E
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 253 MKIKGHPPNRPVYTMLITMCGRG 275
+K G + M++ M G
Sbjct: 588 IKRCGFSVDASTVKMVVDMLSDG 610
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 131/262 (50%), Gaps = 2/262 (0%)
Query: 63 CEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPV 122
C + A++ + ++I+ G+ PD T++ L+N C G++ EA E + M + G P +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 123 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYS 182
+ LV GL G + A ++++M++ GF + T+ +++ +CKSG+ +E+
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 183 VCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQ 242
+ + + D Y I+I + K G +D AF L + + G K +Y +I+G G+
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 243 FDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDL 302
+DD +M + P+ ++ LI + G+ EA EM + G++P + +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 303 VTDGLKNCGKHDLAEKIELLEV 324
+ DG C ++ L + +L++
Sbjct: 358 LIDGF--CKENQLDKANHMLDL 377
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 133/301 (44%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S +I G V A+E+ ++ + ++ N+L+ LC A LI RM
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ GF P++ TY ++ C SG+ A E L++M ++ +++ GL G L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
++A + N+M +GF D+ + +LI C +G + ++ + K + DV + L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I K G + EA L +++ G P Y +I G + Q D A M KG
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
PN + +LI + + +M+ G+ + ++ + G GK ++A++
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 319 I 319
+
Sbjct: 444 L 444
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%)
Query: 34 DNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAIL 93
D+AV++F + T + ++ ++ L + K + L ++M KG + T +I+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 94 VNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGF 153
+N C K+ A + ++ G+ P L+ GL G + A ++V++M++ G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 154 VLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFR 213
L T N+L+ +C +G+V V + + + G + TY ++ + K+G A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 214 LLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCG 273
LL + E K Y+ II G+ + G D+AF F+EM+IKG + +YT LI
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 274 RGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
GR+ + A L +M + +TP F + D GK AE++
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 134/306 (43%), Gaps = 4/306 (1%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
TL+ ++ +G V +AV + ++ Q + Y +L +C+ A L+R+M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ D Y+I+++ C G + A EM KGF + L++G AG
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ +++ MIK+ D+ F++LI+ K G++ E++ + + G+ D TY L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I K +D+A +L +V G P + +I G + DD F +M ++G
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA-- 316
+ Y LI G+ A EM + P + ++ DGL + G+ + A
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 317 --EKIE 320
EKIE
Sbjct: 479 IFEKIE 484
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 139/286 (48%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + ++ + K G +A +VF++ ++ YN+L+ LC + A ++ +M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
G P+ TY L++ +C GK+ +A +++ +G +P + ++LV G G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A +MV +M ++G T+ LI+T +S +E +++ S+ +LGL DV TY +L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I G ++EA RL ++VE +P +Y +I G + G A EM+ K
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVT 304
PN Y +I + + + EA + +M + G+ P + L++
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 134/293 (45%), Gaps = 2/293 (0%)
Query: 31 GLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTY 90
G ++ + ++ + T F V++Y +L+ C+ A L M + G V ++RTY
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 91 AILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIK 150
+L+N +G ++ E ++M + G P + + ++ L G + A Q+ ++M +
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 151 QGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDE 210
+G ++ T+N+LI +C+ ++ ++ + G+ ++ TY LI G + +
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 211 AFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLIT 270
A L +L G P Y ++ G R+G A EM+ +G P++ YT+LI
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 271 MCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELLE 323
R +A + M E+GL P + ++ G C K + E L +
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF--CIKGQMNEASRLFK 467
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 123/272 (45%), Gaps = 3/272 (1%)
Query: 58 LLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKG 117
L+ CE ++ L+ + GF P+ Y L++ C G++ +A++ EM G
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 118 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCV 177
R +L+ GL G + +M KM + G +L T+N ++ +CK G +
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 178 EMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGM 237
+++ + + G+ ++ TY LI + + ++EA +++ + DG P Y +I G
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 238 FRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPIS 297
G+ A ++K +G P+ Y +L++ R G AA + EM E G+ P
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 298 RCFDLVTDGLKNCGKHDLAEKIELLEVSLRSV 329
+ ++ D + D EK L +S+ +
Sbjct: 409 VTYTILIDTF---ARSDNMEKAIQLRLSMEEL 437
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 7/270 (2%)
Query: 54 LYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEM 113
LY ++ + + + + + + M+ GFVP + L+ S + F E
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 114 SDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEV 173
K V +L++G AG +E + ++ ++ + GF ++ + +LI+ CK GE+
Sbjct: 156 KSKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 174 EFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAP- 232
E ++++ + KLGL A+ TY +LI + K G+ + F + + EDG FP+LY
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG--VFPNLYTYN 272
Query: 233 -IIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEM 291
++ + + G+ DAF F EM+ +G N Y LI R + EA + +M
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Query: 292 GLTPISRCFDLVTDGLKNCGKHDLAEKIEL 321
G+ P ++ + DG CG L + + L
Sbjct: 333 GINPNLITYNTLIDGF--CGVGKLGKALSL 360
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 140/306 (45%), Gaps = 18/306 (5%)
Query: 12 NLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGA 71
N V Q+L+L I F + +VDN + C +N LL + F+
Sbjct: 102 NSYVQSQSLNLSISYFNE--MVDNGFVPGSNC-----------FNYLLTFVVGSSSFNQW 148
Query: 72 YALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQG 131
++ K V D ++ IL+ C +G++ ++ + L E+++ GF+P V L+ G
Sbjct: 149 WSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG 207
Query: 132 LLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCAD 191
G +E AK + +M K G V + T+ LI + K+G + EMY + + G+ +
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267
Query: 192 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFS 251
+ TY ++ + K G +AF++ + E G Y +I G+ R + ++A
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 252 EMKIKGHPPNRPVYTMLIT-MCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNC 310
+MK G PN Y LI CG G+ +A + ++ GL+P ++++ G C
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGV-GKLGKALSLCRDLKSRGLSPSLVTYNILVSGF--C 384
Query: 311 GKHDLA 316
K D +
Sbjct: 385 RKGDTS 390
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%)
Query: 29 KHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKR 88
K G ++ A ++F + Y L+ L + + + + +M G P+
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 89 TYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM 148
TY ++N C G+ ++A + EM ++G + + + L+ GL L A ++V++M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 149 IKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMI 208
G +L T+N+LI+ C G++ + + + GL + TY IL+ + G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 209 DEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTML 268
A +++ + E G KP Y +I R + A M+ G P+ Y++L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 269 ITMCGRGGRFVEAANYLVEMTEMGLTP 295
I G+ EA+ M E P
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEP 476
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 107/234 (45%)
Query: 3 KTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFAL 62
K ++ MK ++ + T + +I+ F G + A+ + + ++ YN L+
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 63 CEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPV 122
C GA +++ M +G P K TY IL++ + S M +A + M + G P V
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 443
Query: 123 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYS 182
+L+ G G + A ++ M+++ + +N++I CK G +++
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Query: 183 VCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKG 236
+ + L +V++Y+ +I + K EA RL+ +++ G P S+ + I +
Sbjct: 504 MEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 153/312 (49%), Gaps = 8/312 (2%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
+ + +I F K G D A +++ V+ YNS++ ALC+ + A ++ M
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
++ G +PD TY +++ +CSSG+ +EA FL++M G P V LL+ L G
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSV---CKLGLCADVSTY 195
A+++ + M K+G ++ T+ +L++ G + VEM+ + + G+ D +
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL---VEMHGLLDLMVRNGIHPDHYVF 374
Query: 196 KILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKI 255
ILI A +K G +D+A + + + G P Y +I + + G+ +DA +F +M
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434
Query: 256 KGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDL 315
+G P VY LI ++ A ++EM + G+ + F+ + D +C + +
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID--SHCKEGRV 492
Query: 316 AEKIELLEVSLR 327
E +L E+ +R
Sbjct: 493 IESEKLFELMVR 504
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 139/307 (45%), Gaps = 35/307 (11%)
Query: 1 MWKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLF 60
M ++LM + S++I + K G VD A+ VF+K
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK------------------ 396
Query: 61 ALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNP 120
M ++G P+ TY ++ C SG++ +A + ++M D+G +P
Sbjct: 397 -----------------MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 121 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMY 180
+ L+ GL E A++++ +M+ +G L+ FNS+I++ CK G V +++
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 181 YSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRR 240
+ ++G+ +V TY LI AG +DEA +LL +V G KP Y+ +I G +
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 241 GQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCF 300
+ +DA F EM+ G P+ Y +++ + R A V +TE G +
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619
Query: 301 DLVTDGL 307
+++ GL
Sbjct: 620 NIILHGL 626
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 147/329 (44%), Gaps = 39/329 (11%)
Query: 39 VFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRK---GFVPDKRTYAILVN 95
V + T C V YN LL LC+ A L+ M G PD +Y ++N
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 96 AWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVL 155
+ G +A EM D+G P V + ++ L A ++ A +++N M+K G +
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 156 DLETFNSLIETICKSGE--------------------VEFCVEMYY-------------- 181
D T+NS++ C SG+ V + + M Y
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 182 -SVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRR 240
S+ K GL +++TY L+ + G + E LL +V +G P +++ +I ++
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 241 GQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCF 300
G+ D A FS+M+ +G PN Y +I + + GR +A Y +M + GL+P + +
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 301 DLVTDGLKNCGKHDLAEKIELLEVSLRSV 329
+ + GL C K + AE++ +LE+ R +
Sbjct: 445 NSLIHGLCTCNKWERAEEL-ILEMLDRGI 472
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + II K +D A+EV N + YNS+L C A +++M
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
G PD TY++L++ C +G+ EA++ M+ +G P + L+QG G L
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+++ M++ G D F+ LI K G+V+ + ++ + + GL + TY +
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAV 412
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + K+G +++A ++++G P +Y +I G+ +++ A EM +G
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
N + +I + GR +E+ M +G+ P ++ + +G GK D A K
Sbjct: 473 CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532
Query: 319 I 319
+
Sbjct: 533 L 533
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T SL+++ K+G A ++F+ T + + Y +LL + L+ M
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+R G PD ++IL+ A+ GK+ +A +M +G NP ++ L +G +
Sbjct: 363 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
E A +MI +G +NSLI +C + E E+ + G+C + + +
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + K G + E+ +L +V G KP Y +I G G+ D+A S M G
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
PN Y+ LI + R +A EM G++P ++++ GL
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 124/268 (46%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKG 82
II+ K G V + ++F + V+ YN+L+ C A L+ M+ G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 83 FVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAK 142
P+ TY+ L+N +C +M +A +EM G +P + ++++QGL +AK
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 143 QMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAV 202
++ ++ + G ++L T+N ++ +CK+ + ++M+ ++C + L + T+ I+I A+
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661
Query: 203 SKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNR 262
K G DEA L +G P Y + + + +G ++ F M+ G +
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 721
Query: 263 PVYTMLITMCGRGGRFVEAANYLVEMTE 290
+ ++ + G A YL + E
Sbjct: 722 GMLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 4/269 (1%)
Query: 52 VLLYNSLLFALCEVKLFHGAYALI-RRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFL 110
+ + LL LC K A ++ RRM G +P+ +Y IL+ C + +EA E L
Sbjct: 122 AIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELL 181
Query: 111 QEMSDK--GFNPP-VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETI 167
M+D G +PP V ++ G G + A ++M+ +G + D+ T+NS+I +
Sbjct: 182 HMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAAL 241
Query: 168 CKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFP 227
CK+ ++ +E+ ++ K G+ D TY ++ +G EA L + DG +P
Sbjct: 242 CKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDV 301
Query: 228 SLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVE 287
Y+ ++ + + G+ +A F M +G P Y L+ G VE L
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 288 MTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
M G+ P F ++ GK D A
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 144/319 (45%), Gaps = 3/319 (0%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ L+ + T +I K G V++A+ F + ++YNSL+ LC
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
+ A LI M+ +G + + ++++ C G++ E+++ + M G P V +
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L+ G AG ++ A ++++ M+ G + T+++LI CK +E + ++ + G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
+ D+ TY I++ + + A L + E G + S Y I+ G+ + DDA
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
F + + + ++I + GR EA + V + GL P + L+ + +
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696
Query: 308 KNCGKHDLAEKIELLEVSL 326
G L E+++ L +S+
Sbjct: 697 IGQG---LLEELDQLFLSM 712
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 108/252 (42%)
Query: 52 VLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQ 111
+ +NS++ + C+ + L M+R G P+ TY L+N +C +GKM EA + L
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 112 EMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSG 171
M G P L+ G +E A + +M G D+ T+N +++ + ++
Sbjct: 536 GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTR 595
Query: 172 EVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYA 231
E+Y + + G ++STY I++ + K + D+A ++ NL K +
Sbjct: 596 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFN 655
Query: 232 PIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEM 291
+I + + G+ D+A F G PN Y ++ G E + M +
Sbjct: 656 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 715
Query: 292 GLTPISRCFDLV 303
G T S + +
Sbjct: 716 GCTVDSGMLNFI 727
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 61 ALCEVKLFHGAYALIR--RMIRKG---FVPDKRTYAILVNAWCSSGKMR----------- 104
AL +V A A+ R RM R G PD TY IL+ C +G++
Sbjct: 56 ALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIK 115
Query: 105 -----EAQEF--------------------LQEMSDKGFNPPVRGRDLLVQGLLNAGYLE 139
+A F L+ M++ G P V ++L++GL + +
Sbjct: 116 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQ 175
Query: 140 SAKQMVNKMIKQ---GFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYK 196
A ++++ M G D+ ++ ++I K G+ + Y+ + G+ DV TY
Sbjct: 176 EALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYN 235
Query: 197 ILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIK 256
+I A+ KA +D+A +L+ +V++G P Y I+ G GQ +A F +M+
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSD 295
Query: 257 GHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
G P+ Y++L+ + GR +EA MT+ GL P + + G G L
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA--LV 353
Query: 317 EKIELLEVSLRS 328
E LL++ +R+
Sbjct: 354 EMHGLLDLMVRN 365
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 8/185 (4%)
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG---LCADVSTY 195
E A+ + ++++++G + N + + + V Y + + G + D+ TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTY 90
Query: 196 KILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF-CFFSEMK 254
ILI +AG +D F L N+++ G + + P++KG+ + DA M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 255 IKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTE---MGLTPISRCFDLVTDGLKNCG 311
G PN Y +L+ R EA L M + G P + V +G G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 312 KHDLA 316
D A
Sbjct: 211 DSDKA 215
>sp|Q9M1D8|PP288_ARATH Pentatricopeptide repeat-containing protein At3g60050
OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1
Length = 473
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 136/292 (46%)
Query: 1 MWKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLF 60
MW+ ++ M + +T +L+I G+ GL AV F K FN + YN++L
Sbjct: 168 MWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILN 227
Query: 61 ALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNP 120
+L VK + + ++M+ GF PD TY IL+ GKM EM+ GF+P
Sbjct: 228 SLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSP 287
Query: 121 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMY 180
++L+ L +A +N M + G + + +LI+ + ++G +E C
Sbjct: 288 DSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFL 347
Query: 181 YSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRR 240
+ K G DV Y ++I +G +D+A + + G P Y +I+G+
Sbjct: 348 DEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMA 407
Query: 241 GQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMG 292
G+F +A EM+ +G PN VY+ L++ + G+ EA + EM + G
Sbjct: 408 GEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 6/262 (2%)
Query: 49 QQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREA-Q 107
+ V Y+ L+ E + + L+ M++ GF RT+ +L+ CS G+ A Q
Sbjct: 146 RHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQ 202
Query: 108 EFLQEMSDKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIE 165
+Q M K FN P + ++ LL + + + +M++ GF D+ T+N L+
Sbjct: 203 AVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLW 262
Query: 166 TICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKP 225
T + G+++ ++ + + G D TY IL+ + K A L+++ E G P
Sbjct: 263 TNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDP 322
Query: 226 FPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYL 285
Y +I G+ R G + F EM G P+ YT++IT G +A
Sbjct: 323 SVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMF 382
Query: 286 VEMTEMGLTPISRCFDLVTDGL 307
EMT G P ++ + GL
Sbjct: 383 REMTVKGQLPNVFTYNSMIRGL 404
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 6/234 (2%)
Query: 89 TYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM 148
+Y +L+ + G+ + + EM GF R +LL+ AG AKQ V +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGL---AKQAVVQF 207
Query: 149 IKQ---GFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKA 205
+K + ++N+++ ++ + + +Y + + G DV TY IL+ +
Sbjct: 208 MKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRL 267
Query: 206 GMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVY 265
G +D RL + DG P Y ++ + + + A + MK G P+ Y
Sbjct: 268 GKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHY 327
Query: 266 TMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
T LI R G +L EM + G P C+ ++ G G+ D A+++
Sbjct: 328 TTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEM 381
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 6/206 (2%)
Query: 109 FLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETIC 168
FL + F V LL++ G ++ ++V++M++ GF TFN LI +
Sbjct: 136 FLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCG 195
Query: 169 KSGEVEFCVEMYYSVCKLGLCADVSTYKILIPA---VSKAGMIDEAFRLLHNLVEDGHKP 225
++G + V + +Y ++ + V + +I+ ++ ++EDG P
Sbjct: 196 EAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYK---QMLEDGFSP 252
Query: 226 FPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYL 285
Y ++ +R G+ D F EM G P+ Y +L+ + G+G + + A L
Sbjct: 253 DVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTL 312
Query: 286 VEMTEMGLTPISRCFDLVTDGLKNCG 311
M E+G+ P + + DGL G
Sbjct: 313 NHMKEVGIDPSVLHYTTLIDGLSRAG 338
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%)
Query: 4 TIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALC 63
T+ MK + S + +I+ + G ++ ++ C+ V+ Y ++
Sbjct: 311 TLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYV 370
Query: 64 EVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVR 123
A + R M KG +P+ TY ++ C +G+ REA L+EM +G NP
Sbjct: 371 VSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFV 430
Query: 124 GRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDL 157
LV L AG L A++++ +M+K+G + L
Sbjct: 431 VYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHL 464
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 121/258 (46%)
Query: 13 LSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
L VS + + II+ F K G +D+AV + + V+ Y SL+ LC+ A
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
+ M KG D Y L++ +C M A E+ ++G NP + L+ G
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
N G + +A + KM+K G DL T+ +LI+ + K G + E+Y + +GL D
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSE 252
Y +++ +SK G + ++ + ++ P +Y +I G +R G D+AF E
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 819
Query: 253 MKIKGHPPNRPVYTMLIT 270
M KG P+ + +L++
Sbjct: 820 MLDKGILPDGATFDILVS 837
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 140/335 (41%), Gaps = 41/335 (12%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
+KP N T S++I+ ++ NA+EV N T+ N + ++Y +++ LC+V
Sbjct: 509 LKPNNY-----TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 68 FHGAYALIRRMIRK------------------------------------GFVPDKRTYA 91
A L+ MI + G P+ TY
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 92 ILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ 151
L+N C + +M +A E EM +KG + L+ G +ESA + ++++++
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 152 GFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEA 211
G +NSLI G + +++Y + K GL D+ TY LI + K G + A
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 212 FRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITM 271
L + G P +Y I+ G+ ++GQF F EMK PN +Y +I
Sbjct: 744 SELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
Query: 272 CGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDG 306
R G EA EM + G+ P FD++ G
Sbjct: 804 HYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 141/311 (45%), Gaps = 3/311 (0%)
Query: 8 MKPYNLSV-SPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVK 66
MK L V S +T + +I K G +D+A+ + ++ + V+ SL+ C+
Sbjct: 294 MKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNN 353
Query: 67 LFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRD 126
A L +M ++G P+ T+++L+ + +G+M +A EF ++M G P V
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH 413
Query: 127 LLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKL 186
++QG L E A ++ ++ + G ++ N+++ +CK G+ + E+ +
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESR 472
Query: 187 GLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDA 246
G+ +V +Y ++ + +D A + N++E G KP Y+ +I G FR +A
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 247 FCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPIS-RCFDLVTD 305
+ M N VY +I + G+ +A L M E +S ++ + D
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 306 GLKNCGKHDLA 316
G G+ D A
Sbjct: 593 GFFKEGEMDSA 603
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 125/319 (39%), Gaps = 35/319 (10%)
Query: 36 AVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGF-VPDKRTYAILV 94
A+EV ++ + LLY+ + A C+ A +L+R M K VP + TY ++
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 95 NAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFV 154
A G M +A EM G + V L+ G L SA + +KM K+G
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 155 LDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLC------------------------- 189
+ TF+ LIE K+GE+E +E Y + LGL
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 190 ---------ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRR 240
A+V ++ + K G DEA LL + G P Y ++ G R+
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491
Query: 241 GQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCF 300
D A FS + KG PN Y++LI C R A + MT + +
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Query: 301 DLVTDGLKNCGKHDLAEKI 319
+ +GL G+ A ++
Sbjct: 552 QTIINGLCKVGQTSKAREL 570
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 11/282 (3%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
+N LL A + + A ++ +M+ +P ++A + EA+E M
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLE----SAKQMVNKMIKQGFVLDLETFNSLIETICKS 170
G V G ++ Q L+ A E A +++++ I++G D ++ ++ CK+
Sbjct: 226 AIG----VDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKT 281
Query: 171 GEVEFCVEMYYSVCKLGLCA-DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSL 229
++ + + + LC TY +I A K G +D+A RL ++ DG
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVA 341
Query: 230 YAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMT 289
+I G + A F +M+ +G PN +++LI + G +A + +M
Sbjct: 342 ATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401
Query: 290 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI--ELLEVSLRSV 329
+GLTP + G KH+ A K+ E E L +V
Sbjct: 402 VLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV 443
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 5/209 (2%)
Query: 117 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFC 176
GF R + L+ + A +VN+M++ + N + + + +
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 177 VEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKG 236
E+Y + +G+ D T ++L+ A + EA +L +E G +P LY+ ++
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 237 MFRRGQFDDAFCFFSEMKIKGH-PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT- 294
+ A EMK K P++ YT +I + G +A EM G++
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 295 PISRCFDLVTDGLKNCGKHDLAEKIELLE 323
+ L+T +C +DL + L +
Sbjct: 338 NVVAATSLITG---HCKNNDLVSALVLFD 363
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 146/306 (47%), Gaps = 32/306 (10%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKG 82
II+ K GLV++AVE+F++ + + YNSL+ LC + A L+R M+ +
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 83 FVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAK 142
VP+ T+ +++ + GK EA + +EM+ + +P V + L+ GL G ++ AK
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 143 QMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAV 202
QM++ M+ +G + D+ T+N+LI CKS V+ +++ + + GL D TY +I
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 203 SKAGM--------------------------------IDEAFRLLHNLVEDGHKPFPSLY 230
+AG +++A L N+ + + + Y
Sbjct: 360 FQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 419
Query: 231 APIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTE 290
+I GM + G +DA+ F + KG P+ YT +I+ R ++ ++ +M E
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Query: 291 MGLTPI 296
GL P+
Sbjct: 480 DGLLPL 485
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 130/300 (43%)
Query: 20 LSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMI 79
S ++ + K D + +F+ + YN ++ LC F A +++ +M+
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 80 RKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLE 139
+ G+ PD T + L+N +C ++ +A + + +M + GF P V + ++ G G +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 140 SAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILI 199
A ++ ++M + G D T+NSL+ +C SG + + + +V T+ +I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 200 PAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHP 259
K G EA +L + P Y +I G+ G+ D+A M KG
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 260 PNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
P+ Y LI + R E EM + GL + ++ + G G+ D A++I
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 3/251 (1%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T+S +I F + V +A+++ +K + V++YN+++ C++ L + A L RM
Sbjct: 141 TVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM 200
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
R G D TY LV C SG+ +A +++M + P V ++ + G
Sbjct: 201 ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 260
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A ++ +M ++ D+ T+NSLI +C G V+ +M + G DV TY L
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I K+ +DE +L + + G Y II+G F+ G+ D A FS M +
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-- 378
Query: 259 PPNRPVYTMLI 269
PN Y++L+
Sbjct: 379 -PNIRTYSILL 388
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 3/208 (1%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I HG VD A ++ + C V+ YN+L+ C+ K L R M
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
++G V D TY ++ + +G+ AQE M + P +R +L+ GL +
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRV 397
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
E A + M K LD+ T+N +I +CK G VE +++ S+ GL DV +Y +
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPF 226
I + D++ L + EDG P
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQEDGLLPL 485
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 52 VLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQ 111
++ ++ +L + + K + +L M G D +Y I++N C + A +
Sbjct: 69 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVG 128
Query: 112 EMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSG 171
+M G+ P V L+ G + A +V+KM + GF D+ +N++I+ CK G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 172 EVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYA 231
V VE++ + + G+ AD TY L+ + +G +A RL+ ++V P +
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 232 PIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEM 291
+I + G+F +A + EM + P+ Y LI GR EA L M
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 292 GLTPISRCFDLVTDGLKNCGKHDLAEKI 319
G P ++ + +G + D K+
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/103 (19%), Positives = 48/103 (46%)
Query: 18 QTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRR 77
+T S+++ + V+ A+ +F + + YN ++ +C++ A+ L R
Sbjct: 382 RTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRS 441
Query: 78 MIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNP 120
+ KG PD +Y +++ +C + ++ ++M + G P
Sbjct: 442 LSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 1/258 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T+ ++ F + V +AV + +K + ++ YN+++ +LC+ K + A+ + +
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
RKG P+ TY LVN C+S + +A L +M K P V L+ + G +
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
AK++ +M++ D+ T++SLI +C ++ +M+ + G ADV +Y L
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I KA +++ +L + + G Y +I+G F+ G D A FFS+M G
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 259 PPNRPVYTMLI-TMCGRG 275
P+ Y +L+ +C G
Sbjct: 397 SPDIWTYNILLGGLCDNG 414
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 142/295 (48%), Gaps = 2/295 (0%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKG 82
II+ K V++A + F + + V+ Y +L+ LC + A L+ MI+K
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 83 FVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAK 142
P+ TY+ L++A+ +GK+ EA+E +EM +P + L+ GL ++ A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 143 QMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAV 202
QM + M+ +G + D+ ++N+LI CK+ VE ++++ + + GL ++ TY LI
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 203 SKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNR 262
+AG +D+A + G P Y ++ G+ G+ + A F +M+ + +
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435
Query: 263 PVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAE 317
YT +I + G+ EA + ++ GL P + + GL C K L E
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL--CTKGLLHE 488
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 123/243 (50%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S +++ F K+G V A E+F + + ++ Y+SL+ LC A + M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ KG + D +Y L+N +C + ++ + + +EMS +G + L+QG AG +
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A++ ++M G D+ T+N L+ +C +GE+E + ++ + K + D+ TY +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + K G ++EA+ L +L G KP Y ++ G+ +G + +++MK +G
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 259 PPN 261
N
Sbjct: 502 MKN 504
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 128/267 (47%), Gaps = 2/267 (0%)
Query: 57 SLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDK 116
SL+ C A +L+ +M+ G+ PD Y ++++ C + ++ +A +F +E+ K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 117 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFC 176
G P V LV GL N+ A ++++ MIK+ ++ T+++L++ K+G+V
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 177 VEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKG 236
E++ + ++ + D+ TY LI + IDEA ++ +V G Y +I G
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 237 MFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPI 296
+ + +D F EM +G N Y LI + G +A + +M G++P
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 297 SRCFDLVTDGLKNCGKHDLAEKIELLE 323
++++ GL C +L + + + E
Sbjct: 400 IWTYNILLGGL--CDNGELEKALVIFE 424
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 2/226 (0%)
Query: 102 KMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFN 161
K+ +A + +M P + + L+ ++ + + KM G DL TFN
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 162 SLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED 221
+I C +V + + + KLG D T L+ + + +A L+ +VE
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 222 GHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEA 281
G+KP Y II + + + +DAF FF E++ KG PN YT L+ R+ +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 282 ANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELLEVSLR 327
A L +M + +TP + + D GK + E EL E +R
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGK--VLEAKELFEEMVR 288
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 112/275 (40%), Gaps = 35/275 (12%)
Query: 33 VDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAI 92
+++A+++F+ ++ +N LL A+ ++K + +L ++M G D T+ I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 93 LVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG 152
++N +C ++ A L KM+K G
Sbjct: 126 VINCFCCCFQVSLALSIL-----------------------------------GKMLKLG 150
Query: 153 FVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAF 212
+ D T SL+ C+ V V + + ++G D+ Y +I ++ K +++AF
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 213 RLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMC 272
+ G +P Y ++ G+ ++ DA S+M K PN Y+ L+
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
+ G+ +EA EM M + P + + +GL
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M L + T + +I+ F + G VD A E F++ F + YN LL LC+
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A + M ++ D TY ++ C +GK+ EA +S KG P +
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFV 154
++ GL G L + + KM ++G +
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLM 502
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV 65
E M+ + + T + +I K G V+ A +F + + ++ Y +++ LC
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 66 KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPV 122
L H AL +M ++G + + T S G + + E +++M G+ P +
Sbjct: 484 GLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAELIKKMLSCGYAPSL 532
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 133/273 (48%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKG 82
II+ K VDNA+++ N+ V+ YNSL+ LC + A ++ M ++
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 83 FVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAK 142
PD T+ L++A G++ EA+EF +EM + +P + LL+ GL L+ A+
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 143 QMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAV 202
+M M+ +G D+ T++ LI CKS +VE ++++ + + G+ + TY ILI
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 203 SKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNR 262
+AG ++ A + +V G P Y ++ G+ G+ + A ++M+ G +
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 263 PVYTMLITMCGRGGRFVEAANYLVEMTEMGLTP 295
Y ++I + G +A + + GL P
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 143/317 (45%), Gaps = 5/317 (1%)
Query: 1 MWKTIELMK-PYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLL 59
+W+ ++++ P+NL T ++++ F + + A+ K + ++ + SLL
Sbjct: 103 LWEQMQMLGIPHNLC----TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 60 FALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFN 119
C + A + +M+ G+ P+ Y +++ C S ++ A + L M G
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 120 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEM 179
P V + L+ GL ++G A +MV+ M K+ D+ TFN+LI+ K G V E
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 180 YYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFR 239
Y + + L D+ TY +LI + +DEA + +V G P Y+ +I G +
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 240 RGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRC 299
+ + F EM +G N YT+LI R G+ A M G+ P
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 300 FDLVTDGLKNCGKHDLA 316
++++ GL + GK + A
Sbjct: 399 YNVLLHGLCDNGKIEKA 415
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%)
Query: 56 NSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSD 115
N LL C A + + +MI+ G P T+ L+N +C ++ +A +M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 116 KGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEF 175
G+ P V + ++ GL + +++A ++N+M K G D+ T+NSLI +C SG
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 176 CVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIK 235
M + K + DV T+ LI A K G + EA ++ P Y+ +I
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 236 GMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTP 295
G+ + D+A F M KG P+ Y++LI + + EM++ G+
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 296 ISRCFDLVTDGLKNCGKHDLAEKI 319
+ + ++ G GK ++AE+I
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEI 383
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 2/214 (0%)
Query: 14 SVSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGA 71
S+ P T SL+I + +D A E+F + C V+ Y+ L+ C+ K
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 72 YALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQG 131
L M ++G V + TY IL+ +C +GK+ A+E + M G +P + ++L+ G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 132 LLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCAD 191
L + G +E A ++ M K G D+ T+N +I +CK+GEV ++Y S+ GL D
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 192 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKP 225
+ TY ++ + K G+ EA L + EDG P
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 136/302 (45%), Gaps = 11/302 (3%)
Query: 33 VDNAVEVFNKCTAFNCQQCVLL-----YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDK 87
+D+++++F F+ QC L ++ LL A+ ++K + L +M G +
Sbjct: 62 LDDSLDLF-----FHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116
Query: 88 RTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNK 147
T IL+N +C ++ A FL +M G P + L+ G + A M ++
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 148 MIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGM 207
M+ G+ ++ +N++I+ +CKS +V+ +++ + K G+ DV TY LI + +G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 208 IDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTM 267
+A R++ + + P + +I + G+ +A F+ EM + P+ Y++
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 268 LITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELLEVSLR 327
LI R EA M G P + ++ +G K + K+ E+S R
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL-FCEMSQR 355
Query: 328 SV 329
V
Sbjct: 356 GV 357
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%)
Query: 15 VSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYAL 74
V +T + ++ + G +D A + + C + YN+L+ C K A+
Sbjct: 516 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 575
Query: 75 IRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLN 134
+ M+++G PD TY+IL+ + K+ EA +F + G P V +++ G
Sbjct: 576 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 635
Query: 135 AGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVST 194
A E ++ ++M+ + + +N LI C+SG + +E+ + G+ + +T
Sbjct: 636 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 695
Query: 195 YKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMK 254
Y LI +S ++EA L + +G +P Y +I G + GQ C EM
Sbjct: 696 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 755
Query: 255 IKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPIS 297
K PN+ YT++I R G EA+ L EM E G+ P S
Sbjct: 756 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 798
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 142/312 (45%), Gaps = 8/312 (2%)
Query: 12 NLSVSPQTLSLIIEEFGKHGLVDNAVEVF----NKCTAFNCQQCVLLYNSLLFALCEVKL 67
N+S L+ +I KHG A+E++ NK + + N+LL LCE
Sbjct: 478 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS----NALLHGLCEAGK 533
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A+ + + ++ +G V D+ +Y L++ C K+ EA FL EM +G P +
Sbjct: 534 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 593
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L+ GL N +E A Q + + G + D+ T++ +I+ CK+ E E + +
Sbjct: 594 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 653
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
+ + Y LI A ++G + A L ++ G P + Y +IKGM + ++A
Sbjct: 654 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 713
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
F EM+++G PN YT LI G+ G+ V+ L EM + P + ++ G
Sbjct: 714 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 773
Query: 308 KNCGKHDLAEKI 319
G A ++
Sbjct: 774 ARDGNVTEASRL 785
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 138/304 (45%), Gaps = 4/304 (1%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNK--CTAFNCQQCVLLYNSLLFALC 63
+LM LS++ T + +I+ + K+G DNA + + FN Q + S++ LC
Sbjct: 402 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS--FTSVICLLC 459
Query: 64 EVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVR 123
+F A + M+ + P L++ C GK +A E + +KGF R
Sbjct: 460 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 519
Query: 124 GRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSV 183
+ L+ GL AG L+ A ++ +++ +G V+D ++N+LI C +++ +
Sbjct: 520 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 579
Query: 184 CKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQF 243
K GL D TY ILI + ++EA + + +G P Y+ +I G + +
Sbjct: 580 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 639
Query: 244 DDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLV 303
++ FF EM K PN VY LI R GR A +M G++P S + +
Sbjct: 640 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699
Query: 304 TDGL 307
G+
Sbjct: 700 IKGM 703
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 144/335 (42%), Gaps = 37/335 (11%)
Query: 15 VSPQT--LSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
VSP + I F K G V+ AV++F+K V+ +N+++ L + A+
Sbjct: 269 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 328
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
+M+ +G P TY+ILV + ++ +A L+EM+ KGF P V + L+
Sbjct: 329 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 388
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
+ AG L A ++ + M+ +G L T+N+LI+ CK+G+ + + + +G +
Sbjct: 389 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 448
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRR------------ 240
++ +I + M D A R + ++ P L +I G+ +
Sbjct: 449 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 508
Query: 241 -----------------------GQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGR 277
G+ D+AF E+ +G +R Y LI+ C +
Sbjct: 509 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 568
Query: 278 FVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK 312
EA +L EM + GL P + + ++ GL N K
Sbjct: 569 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 603
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 139/329 (42%), Gaps = 37/329 (11%)
Query: 15 VSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
V+P T + +I+ G G D A K + ++ Y+ L+ L K AY
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 363
Query: 73 ALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGL 132
+++ M +KGF P+ Y L++++ +G + +A E M KG + + L++G
Sbjct: 364 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 423
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNS------------------------------ 162
G ++A++++ +M+ GF ++ +F S
Sbjct: 424 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 483
Query: 163 -----LIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHN 217
LI +CK G+ +E+++ G D T L+ + +AG +DEAFR+
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 543
Query: 218 LVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGR 277
++ G Y +I G + + D+AF F EM +G P+ Y++LI +
Sbjct: 544 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 603
Query: 278 FVEAANYLVEMTEMGLTPISRCFDLVTDG 306
EA + + G+ P + ++ DG
Sbjct: 604 VEEAIQFWDDCKRNGMLPDVYTYSVMIDG 632
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%)
Query: 52 VLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQ 111
V L+ + + A C+ A L +M G P+ T+ +++ G+ EA F +
Sbjct: 273 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 332
Query: 112 EMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSG 171
+M ++G P + +LV+GL A + A ++ +M K+GF ++ +N+LI++ ++G
Sbjct: 333 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 392
Query: 172 EVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYA 231
+ +E+ + GL STY LI K G D A RLL ++ G +
Sbjct: 393 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 452
Query: 232 PIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEM 291
+I + FD A F EM ++ P + T LI+ + G+ +A +
Sbjct: 453 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 512
Query: 292 GLTPISRCFDLVTDGLKNCGKHDLAEKIE 320
G +R + + GL GK D A +I+
Sbjct: 513 GFVVDTRTSNALLHGLCEAGKLDEAFRIQ 541
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 6/243 (2%)
Query: 87 KRTYAILVNAWCSSGKMRE---AQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQ 143
++ +L+ +C+ K A + +++KG P ++L+ L+ A + +
Sbjct: 201 RKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCE 260
Query: 144 MVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVS 203
+ ++ +G D+ F + I CK G+VE V+++ + + G+ +V T+ +I +
Sbjct: 261 AFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG 319
Query: 204 KAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRP 263
G DEAF +VE G +P Y+ ++KG+ R + DA+ EM KG PPN
Sbjct: 320 MCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI 379
Query: 264 VYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI--EL 321
VY LI G +A M GL+ S ++ + G G+ D AE++ E+
Sbjct: 380 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 439
Query: 322 LEV 324
L +
Sbjct: 440 LSI 442
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 159 TFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNL 218
T N L+ ++ ++ E + C E + VCK G+ DV + I A K G ++EA +L +
Sbjct: 241 TCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 299
Query: 219 VEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRF 278
E G P + +I G+ G++D+AF F +M +G P Y++L+ R R
Sbjct: 300 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 359
Query: 279 VEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELLEVS 325
+A L EMT+ G P ++ + D G + A +I+ L VS
Sbjct: 360 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 406
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 5/240 (2%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
+KP N T S++I V+ A++ ++ C V Y+ ++ C+ +
Sbjct: 584 LKPDNY-----TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 638
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
M+ K P+ Y L+ A+C SG++ A E ++M KG +P
Sbjct: 639 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 698
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L++G+ +E AK + +M +G ++ + +LI+ K G++ + +
Sbjct: 699 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 758
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
+ + TY ++I ++ G + EA RLL+ + E G P Y I G ++G +AF
Sbjct: 759 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 818
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S++I+ K + E F++ + N Q ++YN L+ A C A L M
Sbjct: 625 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 684
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
KG P+ TY L+ ++ EA+ +EM +G P V L+ G G +
Sbjct: 685 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 744
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ ++ +M + + T+ +I + G V + + + G+ D TYK
Sbjct: 745 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 804
Query: 199 IPAVSKAGMIDEAFR 213
I K G + EAF+
Sbjct: 805 IYGYLKQGGVLEAFK 819
>sp|Q7X6A5|PPR81_ARATH Pentatricopeptide repeat-containing protein At1g55630
OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1
Length = 477
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 135/292 (46%)
Query: 1 MWKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLF 60
M + I+ M + T +L+I G+ GL + VE F K FN + YN++L
Sbjct: 171 MCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILH 230
Query: 61 ALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNP 120
+L VK + + +M+ GF PD TY I++ A GK L EM GF+P
Sbjct: 231 SLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 121 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMY 180
+ ++L+ L +A ++N M + G + F +LI+ + ++G++E C
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFM 350
Query: 181 YSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRR 240
K+G DV Y ++I G +++A + + E G P Y +I+G
Sbjct: 351 DETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
Query: 241 GQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMG 292
G+F +A EM+ +G PN VY+ L+ G+ +EA + +M E G
Sbjct: 411 GKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 4/260 (1%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
Y+ L+ E + LI MI+ G+ T+ +L+ +G R+ E Q +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVE--QFIK 212
Query: 115 DKGFN--PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGE 172
K FN P + ++ LL + + +M++ GF D+ T+N ++ + G+
Sbjct: 213 SKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGK 272
Query: 173 VEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAP 232
+ + + K G D+ TY IL+ ++ A LL+++ E G +P +
Sbjct: 273 TDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTT 332
Query: 233 IIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMG 292
+I G+ R G+ + F E G P+ YT++IT GG +A EMTE G
Sbjct: 333 LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 293 LTPISRCFDLVTDGLKNCGK 312
P ++ + G GK
Sbjct: 393 QLPNVFTYNSMIRGFCMAGK 412
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 105/243 (43%), Gaps = 6/243 (2%)
Query: 80 RKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLE 139
++ F Y +L+ + G+ + + EM G+ +LL+ AG
Sbjct: 145 QENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGL-- 202
Query: 140 SAKQMVNKMIKQ---GFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYK 196
A+ +V + IK + ++N+++ ++ + + +Y + + G DV TY
Sbjct: 203 -ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYN 261
Query: 197 ILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIK 256
I++ A + G D +RLL +V+DG P Y ++ + + A + M+
Sbjct: 262 IVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREV 321
Query: 257 GHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
G P +T LI R G+ ++ E ++G TP C+ ++ G + G+ + A
Sbjct: 322 GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKA 381
Query: 317 EKI 319
E++
Sbjct: 382 EEM 384
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 63/138 (45%)
Query: 20 LSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMI 79
+ +I+ + G ++ ++ C V+ Y ++ A + + M
Sbjct: 330 FTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMT 389
Query: 80 RKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLE 139
KG +P+ TY ++ +C +GK +EA L+EM +G NP LV L NAG +
Sbjct: 390 EKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVL 449
Query: 140 SAKQMVNKMIKQGFVLDL 157
A ++V M+++G + L
Sbjct: 450 EAHEVVKDMVEKGHYVHL 467
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%)
Query: 48 CQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQ 107
C ++ YN+++ C++ AY + + + KGF+P T+ ++N +C G +
Sbjct: 236 CIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASD 295
Query: 108 EFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETI 167
L E+ ++G V + ++ GY + + +I D+ T+N LI +
Sbjct: 296 RLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRL 355
Query: 168 CKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFP 227
CK G+ E V K GL + +Y LI A K+ D A +LL + E G KP
Sbjct: 356 CKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 228 SLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVE 287
Y +I G+ G DDA ++ +G P+ +Y ML++ + GRF+ A E
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSE 475
Query: 288 MTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELLEV 324
M + + P + + + DG G D A K+ L V
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV 512
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 124/262 (47%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
+K L VS L+ II+ +HG + E A +C+ V YN L+ LC+
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGK 360
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A + +KG +P+ +YA L+ A+C S + A + L +M+++G P + +
Sbjct: 361 KEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGI 420
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L+ GL+ +G+++ A M K+I +G D +N L+ +CK+G ++ +
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
+ D Y LI ++G DEA ++ VE G K + +IKG R G D+A
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540
Query: 248 CFFSEMKIKGHPPNRPVYTMLI 269
+ M + P++ Y+ +I
Sbjct: 541 ACMNRMNEEHLVPDKFTYSTII 562
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +++I K G + AV ++ + L Y L+ A C+ K + A L+ +M
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+G PD TY IL++ SG M +A ++ D+G +P ++L+ GL G
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
AK + ++M+ + + D + +LI+ +SG+ + +++ + G+ DV + +
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAM 526
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I ++GM+DEA ++ + E+ P Y+ II G ++ A F M+
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTP 295
PN YT LI G F A EM L P
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVP 623
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 125/279 (44%), Gaps = 5/279 (1%)
Query: 10 PYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFH 69
P NLS +P +I+ + K D A ++ + C+ ++ Y L+ L
Sbjct: 378 PNNLSYAP-----LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 70 GAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLV 129
A + ++I +G PD Y +L++ C +G+ A+ EM D+ P L+
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 130 QGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLC 189
G + +G + A+++ + +++G +D+ N++I+ C+SG ++ + + + L
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552
Query: 190 ADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCF 249
D TY +I K + A ++ + ++ KP Y +I G +G F A
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612
Query: 250 FSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEM 288
F EM+++ PN YT LI + +E A Y E+
Sbjct: 613 FKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWEL 651
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 100/256 (39%), Gaps = 15/256 (5%)
Query: 21 SLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIR 80
+ +I+ F + G D A +VF+ + V+ +N+++ C + A A + RM
Sbjct: 489 ATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Query: 81 KGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLES 140
+ VPDK TY+ +++ + M A + + M P V L+ G G +
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKM 608
Query: 141 AKQMVNKMIKQGFVLDLETFNSLIETICK-SGEVEFCV--------------EMYYSVCK 185
A++ +M + V ++ T+ +LI ++ K S +E V E+ ++
Sbjct: 609 AEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Query: 186 LGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDD 245
G S + P S G H + DG + Y + + G
Sbjct: 669 QGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKT 728
Query: 246 AFCFFSEMKIKGHPPN 261
A F +M KG P+
Sbjct: 729 ACMFQDKMVKKGFSPD 744
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 91/229 (39%), Gaps = 15/229 (6%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKG 82
+I+ F + G++D A+ N+ + Y++++ + + A + R M +
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 83 FVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLN-AGYLESA 141
P+ TY L+N +C G + A+E +EM + P V L++ L + LE A
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
Query: 142 KQMVNKMIKQGFVLDLETFNSLIETICKS--------------GEVEFCVEMYYSVCKLG 187
M+ V + TFN L++ K G+ E ++ + G
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG 705
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKG 236
+ Y + + GM+ A +V+ G P P +A I+ G
Sbjct: 706 WSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHG 754
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 30 HGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRT 89
HG E F++ + YNS L LC + A +M++KGF PD +
Sbjct: 688 HGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVS 747
Query: 90 YAILVNAWCSSGKMREAQEF-LQEMSDKGFNPPVRGRDLLVQGL 132
+A +++ +C G ++ + + +KG VR +L Q L
Sbjct: 748 FAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYSQVLEQHL 791
Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 99/265 (37%), Gaps = 58/265 (21%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S II+ + K + A+++F C+ V+ Y SL+ C F A + M
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
Query: 79 IRKGFVPDKRTYAILVNA--------------W----------------C--------SS 100
+ VP+ TY L+ + W C +S
Sbjct: 617 QLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Query: 101 GKMREA------------QEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM 148
GK+ EF M G++ + + L G +++A +KM
Sbjct: 677 GKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKM 736
Query: 149 IKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKL---GLCADVSTYKILIPAVSKA 205
+K+GF D +F +++ C G + M + C L GL V ++L + +
Sbjct: 737 VKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDF--CNLGEKGLEVAVRYSQVLEQHLPQP 794
Query: 206 GMIDEAFRLLHNLVE--DGHKPFPS 228
+I EA +LH +VE D +P S
Sbjct: 795 -VICEASTILHAMVEKADTKEPVES 818
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 1/300 (0%)
Query: 21 SLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIR 80
+++I G+ GL+D +EVF++ + + V Y +L+ A + + L+ RM
Sbjct: 145 TIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN 204
Query: 81 KGFVPDKRTYAILVNAWCSSGKMREAQ-EFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLE 139
+ P TY ++NA G E EM +G P + + L+ G +
Sbjct: 205 EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGD 264
Query: 140 SAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILI 199
A+ + M G V DL T++ L+ET K +E ++ + G D+++Y +L+
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 200 PAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHP 259
A +K+G I EA + H + G P + Y+ ++ + G++DD F EMK
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTD 384
Query: 260 PNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
P+ Y +LI + G GG F E +M E + P ++ + G H+ A KI
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKI 444
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 137/310 (44%), Gaps = 1/310 (0%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M +S S + + +I +G++G + ++E+ ++ +L YN+++ A L
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL 226
Query: 68 -FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRD 126
+ G L M +G PD TY L++A G EA+ + M+D G P +
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 127 LLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKL 186
LV+ LE ++ +M G + D+ ++N L+E KSG ++ + +++ +
Sbjct: 287 HLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 187 GLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDA 246
G + +TY +L+ ++G D+ +L + P + Y +I+ G F +
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 247 FCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDG 306
F +M + P+ Y +I CG+GG +A L MT + P S+ + V +
Sbjct: 407 VTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEA 466
Query: 307 LKNCGKHDLA 316
++ A
Sbjct: 467 FGQAALYEEA 476
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S ++E FGK ++ ++ + + + YN LL A + A + +M
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
G P+ TY++L+N + SG+ + ++ EM +P ++L++ GY
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ + + M+++ D+ET+ +I K G E ++ + + Y +
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGV 463
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I A +A + +EA + + E G P + ++ R G ++ S + G
Sbjct: 464 IEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLV 303
P NR + I +GG+F EA V+M + P R + V
Sbjct: 524 PRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAV 568
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 128/297 (43%), Gaps = 1/297 (0%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGL-VDNAVEVFNKCTAFNCQQCVLLYNSLLFALC 63
++ MK +S S T + +I + GL + + +F + Q ++ YN+LL A
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 64 EVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVR 123
L A + R M G VPD TY+ LV + ++ + + L EM+ G P +
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 124 GRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSV 183
++L++ +G ++ A + ++M G + T++ L+ +SG + +++ +
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 184 CKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQF 243
D +TY ILI + G E L H++VE+ +P Y II + G
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 244 DDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCF 300
+DA M P+ YT +I G+ + EA M E+G P F
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 123/289 (42%)
Query: 30 HGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRT 89
GL D A VF + Y+ L+ +++ L+ M G +PD +
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 90 YAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMI 149
Y +L+ A+ SG ++EA +M G P +L+ +G + +Q+ +M
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 150 KQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMID 209
D T+N LIE + G + V +++ + + + D+ TY+ +I A K G+ +
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 210 EAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLI 269
+A ++L + + P Y +I+ + +++A F+ M G P+ + L+
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 270 TMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
RGG E+ L + + G+ F+ + K GK + A K
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVK 548
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
MK N T +++IE FG+ G V +F+ N + + Y ++FA + L
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A +++ M VP + Y ++ A+ + EA M + G NP +
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHS 497
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L+ G ++ ++ ++++++ G + +TFN+ IE + G+ E V+ Y + K
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 188 LCADVSTYKILIPAVSKAGMIDE 210
D T + ++ S A ++DE
Sbjct: 558 CDPDERTLEAVLSVYSFARLVDE 580
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 120/299 (40%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ + + T S+++ FG+ G D+ ++F + + N YN L+ E
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
F L M+ + PD TY ++ A G +A++ LQ M+ P +
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG 462
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
+++ A E A N M + G +ETF+SL+ + + G V+ + + G
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
+ + T+ I A + G +EA + ++ + P ++ D+
Sbjct: 523 IPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECR 582
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDG 306
F EMK P+ Y M++ + G+ R+ + L EM ++ I + + G
Sbjct: 583 EQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKG 641
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/299 (17%), Positives = 122/299 (40%), Gaps = 14/299 (4%)
Query: 3 KTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFAL 62
K ++ M ++ S + + +IE FG+ L + A+ FN + ++SLL++
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSF 502
Query: 63 CEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPV 122
L + A++ R++ G ++ T+ + A+ GK EA + +M +P
Sbjct: 503 ARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562
Query: 123 RGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYS 182
R + ++ A ++ ++ +M + + + ++ K+ + E+
Sbjct: 563 RTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE 622
Query: 183 VCKLGLCADVSTYKILIPAVSKAGMIDEAF-----RLLHNLVEDGHKPFPSLYAPIIKGM 237
+ L VS +I + K D++ +L L +G Y ++ +
Sbjct: 623 M----LSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDAL 678
Query: 238 FRRGQFDDAFCFFSEMKIKGHPP-----NRPVYTMLITMCGRGGRFVEAANYLVEMTEM 291
+ GQ + A +E +G P N+ V+++ + GG + + +L ++ +M
Sbjct: 679 WWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDM 737
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 8/131 (6%)
Query: 195 YKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMK 254
Y I+I + + G++D+ + + G Y +I R G+++ + MK
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 255 IKGHPPNRPVYTMLITMCGRGGRFVEA-ANYLVEMTEMGLTPISRCFDLVTDG--LKNCG 311
+ P+ Y +I C RGG E EM G+ P D+VT L C
Sbjct: 204 NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQP-----DIVTYNTLLSACA 258
Query: 312 KHDLAEKIELL 322
L ++ E++
Sbjct: 259 IRGLGDEAEMV 269
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 67/163 (41%), Gaps = 7/163 (4%)
Query: 150 KQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMID 209
K + D+E+ + + ++ G + C++++ + KL L + + ++ + G
Sbjct: 69 KGKYSYDVESLINKLSSLPPRGSIARCLDIFKN--KLSL----NDFALVFKEFAGRGDWQ 122
Query: 210 EAFRLLHNLVEDGH-KPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTML 268
+ RL + KP +Y +I + R G D F EM +G + YT L
Sbjct: 123 RSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTAL 182
Query: 269 ITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCG 311
I GR GR+ + L M ++P ++ V + G
Sbjct: 183 INAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG 225
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 141/295 (47%), Gaps = 2/295 (0%)
Query: 14 SVSPQTLSL--IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGA 71
S+ P +S +I + K G +D + ++ + V Y++L+ ALC+ GA
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 72 YALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQG 131
+ L M ++G +P+ + L++ +G++ +E Q+M KG P + + LV G
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 132 LLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCAD 191
G L +A+ +V+ MI++G D T+ +LI+ C+ G+VE +E+ + + G+ D
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD 449
Query: 192 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFS 251
+ L+ + K G + +A R L ++ G KP Y ++ ++G F
Sbjct: 450 RVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Query: 252 EMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDG 306
EM+ GH P+ Y +L+ + G+ A L M +G+ P ++ + +G
Sbjct: 510 EMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%)
Query: 20 LSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMI 79
+ +I ++G +D E + K + Q ++LYN+L+ C+ A ++ MI
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 80 RKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLE 139
R+G PDK TY L++ +C G + A E +EM G G LV G+ G +
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 140 SAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILI 199
A++ + +M++ G D T+ +++ CK G+ + ++ + G V TY +L+
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 200 PAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQ 242
+ K G + A LL ++ G P Y +++G R
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 2/272 (0%)
Query: 52 VLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQ 111
V ++N L+ C+ A + + ++ P ++ L+N +C G + E
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 112 EMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSG 171
+M P V L+ L ++ A + ++M K+G + + F +LI ++G
Sbjct: 300 QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNG 359
Query: 172 EVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYA 231
E++ E Y + GL D+ Y L+ K G + A ++ ++ G +P Y
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYT 419
Query: 232 PIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEM 291
+I G R G + A EM G +R ++ L+ + GR ++A L EM
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 292 GLTPISRCFDLVTDGLKNCGKHDLAEKIELLE 323
G+ P + ++ D C K D +LL+
Sbjct: 480 GIKPDDVTYTMMMDAF--CKKGDAQTGFKLLK 509
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%)
Query: 78 MIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGY 137
++ GF + + IL+N +C G + +AQ+ E++ + P V + L+ G G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 138 LESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKI 197
L+ ++ ++M K D+ T+++LI +CK +++ ++ +CK GL + +
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 198 LIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKG 257
LI S+ G ID ++ G +P LY ++ G + G A M +G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 258 HPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGL 293
P++ YT LI RGG A EM + G+
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 98/187 (52%), Gaps = 3/187 (1%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I+ F + G V+ A+E+ + + + +++L+ +C+ A +R M
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+R G PD TY ++++A+C G + + L+EM G P V ++L+ GL G +
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
++A +++ M+ G V D T+N+L+E + + Y ++G+ AD+++YK +
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSS---KRYIQKPEIGIVADLASYKSI 593
Query: 199 IPAVSKA 205
+ + +A
Sbjct: 594 VNELDRA 600
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 2/213 (0%)
Query: 109 FLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETIC 168
F E+ D GF V ++L+ G + A+++ +++ K+ + +FN+LI C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 169 KSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPS 228
K G ++ + + + K DV TY LI A+ K +D A L + + G P
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 229 LYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEM 288
++ +I G R G+ D + +M KG P+ +Y L+ + G V A N + M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 289 TEMGLTPISRCFDLVTDGLKNCGKHDLAEKIEL 321
GL P + + DG C D+ +E+
Sbjct: 407 IRRGLRPDKITYTTLIDGF--CRGGDVETALEI 437
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 128/270 (47%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I+ F K G A ++++ + + YNSL+ C A + M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ K PD TY L+ +C S ++ + E +EMS +G L+QGL + G
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
++A+++ +M+ G D+ T++ L++ +C +G++E +E++ + K + D+ Y +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + KAG +D+ + L +L G KP Y +I G+ + +A+ +MK G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEM 288
PN Y LI R G +A + EM
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 137/296 (46%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +++ K G D A+ + NK A + V+++N+++ +LC+ + A L + M
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
KG P+ TY+ L++ CS G+ +A + L +M +K NP + + L+ + G
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A+++ + MIK+ D+ T+NSL+ C ++ +M+ + DV TY L
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I K+ +++ L + G Y +I+G+F G D+A F +M G
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHD 314
PP+ Y++L+ G+ +A M + + + + +G+ GK D
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 2/243 (0%)
Query: 14 SVSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGA 71
S+ P T + ++ F H +D A ++F + +C V+ YN+L+ C+ K
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 72 YALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQG 131
L R M +G V D TY L+ G AQ+ ++M G P + +L+ G
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 132 LLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCAD 191
L N G LE A ++ + M K LD+ + ++IE +CK+G+V+ +++ S+ G+ +
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 192 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFS 251
V TY +I + ++ EA+ LL + EDG P Y +I+ R G +
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 252 EMK 254
EM+
Sbjct: 600 EMR 602
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 1/303 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S +I +G +A ++ + ++ +N+L+ A + F A L M
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
I++ PD TY LVN +C ++ +A++ + M K P V + L++G + +
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
E ++ +M +G V D T+ +LI+ + G+ + +++ + G+ D+ TY IL
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
+ + G +++A + + + K +Y +I+GM + G+ DD + F + +KG
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFD-LVTDGLKNCGKHDLAE 317
PN Y +I+ EA L +M E G P S ++ L+ L++ K AE
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 318 KIE 320
I
Sbjct: 597 LIR 599
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
YN L+ C A AL+ +M++ G+ P T + L+N +C ++ +A + +M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
+ G+ P L+ GL A +V++M+++G +L T+ ++ +CK G+ +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
+ + + + ADV + +I ++ K +D+A L + G +P Y+ +I
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
+ G++ DA S+M K PN + LI + G+FVEA +M + +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 295 PISRCFDLVTDG 306
P ++ + +G
Sbjct: 363 PDIFTYNSLVNG 374
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 132/310 (42%), Gaps = 2/310 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I H AV + ++ CQ ++ Y ++ LC+ A L+ +M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
D + ++++ C + +A +EM KG P V L+ L + G
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A Q+++ MI++ +L TFN+LI+ K G+ ++Y + K + D+ TY L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
+ +D+A ++ +V P Y +IKG + + +D F EM +G
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
+ YT LI G A +M G+ P + ++ DGL N GK L +
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK--LEKA 489
Query: 319 IELLEVSLRS 328
+E+ + +S
Sbjct: 490 LEVFDYMQKS 499
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +++I F + + A+ + K + ++ +SLL C K A AL+ +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ G+ PD T+ L++ K EA + M +G P + ++V GL G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A ++NKM D+ FN++I+++CK V+ + ++ + G+ +V TY L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + G +A +LL +++E P + +I + G+F +A + +M +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 259 PPNRPVYTMLIT 270
P+ Y L+
Sbjct: 362 DPDIFTYNSLVN 373
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 1/194 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I+ G DNA +VF + + ++ Y+ LL LC A + M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ D Y ++ C +GK+ + + +S KG P V + ++ GL + L
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A ++ KM + G + + T+N+LI + G+ E+ + D ST L
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-L 615
Query: 199 IPAVSKAGMIDEAF 212
+ + G +D++F
Sbjct: 616 VANMLHDGRLDKSF 629
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Query: 147 KMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAG 206
KM + V L T+N LI C+ ++ + + + KLG + T L+
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 207 MIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYT 266
I +A L+ +VE G++P + +I G+F + +A M +G PN Y
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 267 MLIT-MCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
+++ +C RG + A N L +M + F+ + D L
Sbjct: 230 VVVNGLCKRGDTDL-ALNLLNKMEAAKIEADVVIFNTIIDSL 270
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV 65
+ M+ + + + +IE K G VD+ ++F + + V+ YN+++ LC
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 66 KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEM 113
+L AYAL+++M G +P+ TY L+ A G + E ++EM
Sbjct: 554 RLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 1/192 (0%)
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
R++L GL + L+ A + M+K + + FN L+ I K + + + + +
Sbjct: 54 REILRNGLHDMK-LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
+L + + TY ILI + I A LL +++ G++P + ++ G +
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 245 DAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVT 304
DA +M G+ P+ +T LI + EA + M + G P + +V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 305 DGLKNCGKHDLA 316
+GL G DLA
Sbjct: 233 NGLCKRGDTDLA 244
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 137/296 (46%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +++ K G +D A + NK A + V+++N+++ +LC+ + A L + M
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
KG P+ TY+ L++ CS G+ +A + L +M +K NP + + L+ + G
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A+++ + MIK+ D+ T+NSLI C ++ +M+ + D+ TY L
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I K+ +++ L + G Y +I+G+F G D+A F +M G
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHD 314
PP+ Y++L+ G+ +A M + + + + +G+ GK D
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I+ F K G A ++ + + + YNSL+ C A + M
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ K PD TY L+ +C S ++ + E +EMS +G L+QGL + G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
++A+++ +M+ G D+ T++ L++ +C +G++E +E++ + K + D+ Y +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + KAG +D+ + L +L G KP Y +I G+ + +A+ +MK G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEM 288
P+ Y LI R G +A + EM
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 2/243 (0%)
Query: 14 SVSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGA 71
S+ P T + +I F H +D A ++F + +C + YN+L+ C+ K
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 72 YALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQG 131
L R M +G V D TY L+ G AQ+ ++M G P + +L+ G
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 132 LLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCAD 191
L N G LE A ++ + M K LD+ + ++IE +CK+G+V+ +++ S+ G+ +
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 192 VSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFS 251
V TY +I + ++ EA+ LL + EDG P Y +I+ R G +
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
Query: 252 EMK 254
EM+
Sbjct: 525 EMR 527
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 140/303 (46%), Gaps = 1/303 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S +I +G +A ++ + ++ +N+L+ A + F A L M
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
I++ PD TY L+N +C ++ +A++ + M K P + + L++G + +
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
E ++ +M +G V D T+ +LI+ + G+ + +++ + G+ D+ TY IL
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
+ + G +++A + + + K +Y +I+GM + G+ DD + F + +KG
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFD-LVTDGLKNCGKHDLAE 317
PN Y +I+ EA L +M E G P S ++ L+ L++ K AE
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521
Query: 318 KIE 320
I
Sbjct: 522 LIR 524
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 113/241 (46%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
YN L+ C A AL+ +M++ G+ P T + L+N +C ++ +A + +M
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 107
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
+ G+ P L+ GL A +V++M+++G +L T+ ++ +CK G+++
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
+ + + ADV + +I ++ K +D+A L + G +P Y+ +I
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
+ G++ DA S+M K PN + LI + G+FVEA +M + +
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 295 P 295
P
Sbjct: 288 P 288
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 133/310 (42%), Gaps = 2/310 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I H AV + ++ CQ ++ Y ++ LC+ A+ L+ +M
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
D + ++++ C + +A +EM KG P V L+ L + G
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A Q+++ MI++ +L TFN+LI+ K G+ +++ + K + D+ TY L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I +D+A ++ +V P Y +IKG + + +D F EM +G
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
+ YT LI G A +M G+ P + ++ DGL N GK L +
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK--LEKA 414
Query: 319 IELLEVSLRS 328
+E+ + +S
Sbjct: 415 LEVFDYMQKS 424
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 121/265 (45%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV 65
E M+ +S + T +++I F + + A+ + K + ++ +SLL C
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 66 KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGR 125
K A AL+ +M+ G+ PD T+ L++ K EA + M +G P +
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 126 DLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCK 185
++V GL G ++ A ++NKM D+ FN++I+++CK V+ + ++ +
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 186 LGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDD 245
G+ +V TY LI + G +A +LL +++E P + +I + G+F +
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 246 AFCFFSEMKIKGHPPNRPVYTMLIT 270
A +M + P+ Y LI
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLIN 298
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 1/194 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I+ G DNA +VF + + ++ Y+ LL LC A + M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ D Y ++ C +GK+ + + +S KG P V + ++ GL + L
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A ++ KM + G + D T+N+LI + G+ E+ + D ST L
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-L 540
Query: 199 IPAVSKAGMIDEAF 212
+ + G +D++F
Sbjct: 541 VANMLHDGRLDKSF 554
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV 65
+ M+ + + + +IE K G VD+ ++F + + V+ YN+++ LC
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 66 KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGF--NPPVR 123
+L AYAL+++M G +PD TY L+ A G + E ++EM F +
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 538
Query: 124 GRDLLVQGLLNAGYLESA 141
G LV +L+ G L+ +
Sbjct: 539 G---LVANMLHDGRLDKS 553
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%)
Query: 160 FNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLV 219
FN L+ I K + + + + + +LG+ ++ TY ILI + I A LL ++
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 220 EDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFV 279
+ G++P + ++ G + DA +M G+ P+ +T LI +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 280 EAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
EA + M + G P + +V +GL G DLA
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 5/266 (1%)
Query: 2 WKTIELMKPYNLSVSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLL 59
W ++MK + P T + +I+ F K G + A E++N + V Y SL+
Sbjct: 244 WLLRDMMKR---RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 60 FALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFN 119
LC L A + M R G P++ Y L++ +C S ++ + + EMS KG
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 120 PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEM 179
+L+QG G + A+++ N+M + D+ T+N L++ +C +G+VE + +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 180 YYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFR 239
+ + K + ++ TY I+I + K G +++AF L +L G KP Y +I G R
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 240 RGQFDDAFCFFSEMKIKGHPPNRPVY 265
RG +A F +MK G PN VY
Sbjct: 481 RGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 145/312 (46%), Gaps = 35/312 (11%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I K+ +++AVE+FN+ + V+ YN+L+ LCE+ + A L+R M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+++ P+ T+ L++A+ GK+ EA+E M P V L+ GL G L
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A+QM M + G + + +LI CKS VE ++++Y + + G+ A+ TY +L
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 199 IPA---VSKAGMIDEAFRLL-----------HNLVEDG----HKPFPSL----------- 229
I V + + E F + +N++ DG K +L
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Query: 230 ------YAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAAN 283
Y II+GM + G+ +DAF F + KG PN YT +I+ R G EA +
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 284 YLVEMTEMGLTP 295
+M E G P
Sbjct: 490 LFKKMKEDGFLP 501
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%)
Query: 52 VLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQ 111
++ + SLL C A AL +++ GF P+ TY L+ C + + A E
Sbjct: 153 LVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFN 212
Query: 112 EMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSG 171
+M G P V + LV GL G A ++ M+K+ ++ TF +LI+ K G
Sbjct: 213 QMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVG 272
Query: 172 EVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYA 231
++ E+Y + ++ + DV TY LI + G++DEA ++ + + +G P +Y
Sbjct: 273 KLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYT 332
Query: 232 PIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEM 291
+I G + + +D F EM KG N YT+LI GR A +M+
Sbjct: 333 TLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
Query: 292 GLTPISRCFDLVTDGLKNCGKHDLA 316
P R ++++ DGL GK + A
Sbjct: 393 RAPPDIRTYNVLLDGLCCNGKVEKA 417
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 137/298 (45%), Gaps = 8/298 (2%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + ++ + +++A+ +F++ + V+ Y +L+ LC+ + + A L +M
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
G P+ TY LV C G+ +A L++M + P V L+ + G L
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
AK++ N MI+ D+ T+ SLI +C G ++ +M+Y + + G + Y L
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I K+ +++ ++ + + + G Y +I+G G+ D A F++M +
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 259 PPNRPVYTMLIT-MCGRGGRFVEAANYLVEMT---EMGLTPISRCFDLVTDGLKNCGK 312
PP+ Y +L+ +C G VE A + E EM + ++ + ++ G+ GK
Sbjct: 395 PPDIRTYNVLLDGLCCNGK--VEKALMIFEYMRKREMDINIVT--YTIIIQGMCKLGK 448
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 116/249 (46%)
Query: 71 AYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQ 130
A + +M++ GF PD T+ L+N +C ++ +A ++ GF P V L++
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 131 GLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCA 190
L +L A ++ N+M G ++ T+N+L+ +C+ G + + K +
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 191 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFF 250
+V T+ LI A K G + EA L + +++ P Y +I G+ G D+A F
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 251 SEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNC 310
M+ G PN +YT LI + R + EM++ G+ + + ++ G
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 311 GKHDLAEKI 319
G+ D+A+++
Sbjct: 377 GRPDVAQEV 385
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 80/176 (45%)
Query: 21 SLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIR 80
+ +I F K V++ +++F + + + Y L+ C V A + +M
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 81 KGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLES 140
+ PD RTY +L++ C +GK+ +A + M + + + +++QG+ G +E
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 141 AKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYK 196
A + + +G ++ T+ ++I C+ G + ++ + + G + S YK
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 140/323 (43%), Gaps = 36/323 (11%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKG 82
II+ K+ +D+A ++FNK + V YN L+ LC + A L+ M+ K
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 83 FVPDKRTYAILVNAWCSSGKMREAQ----------------------------------- 107
PD + L++A+ GK+ EA+
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 108 -EFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIET 166
E +EMS +G L+ G A ++A+ + +M+ G D+ T+N L++
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 167 ICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPF 226
+C +G VE + ++ + K + D+ TY +I A+ KAG +++ + L +L G KP
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 227 PSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLV 286
Y ++ G R+G ++A F EMK G PN Y LI R G +A +
Sbjct: 496 VVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIK 555
Query: 287 EMTEMGLTPISRCFDLVTDGLKN 309
EM G + F LVT+ L +
Sbjct: 556 EMRSCGFAGDASTFGLVTNMLHD 578
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 1/278 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +I K G D A+ + NK + V++YN+++ LC+ K A+ L +M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
KG PD TY L++ C+ G+ +A L +M +K NP + + L+ + G L
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 139 ESAKQMVNKMIKQGFVL-DLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKI 197
A+++ ++M+K D+ +N+LI+ CK VE +E++ + + GL + TY
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 198 LIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKG 257
LI +A D A + +V DG P Y ++ G+ G + A F M+ +
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 258 HPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTP 295
+ YT +I + G+ + + ++ G+ P
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 125/254 (49%), Gaps = 1/254 (0%)
Query: 23 IIEEFGKHGLVDNAVEVFNK-CTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRK 81
+I+ F K G + A +++++ + +C V+ YN+L+ C+ K + R M ++
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 82 GFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESA 141
G V + TY L++ + + AQ ++M G +P + ++L+ GL N G +E+A
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Query: 142 KQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPA 201
+ M K+ LD+ T+ ++IE +CK+G+VE +++ S+ G+ +V TY ++
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505
Query: 202 VSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPN 261
+ G+ +EA L + EDG P Y +I+ R G + EM+ G +
Sbjct: 506 FCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565
Query: 262 RPVYTMLITMCGRG 275
+ ++ M G
Sbjct: 566 ASTFGLVTNMLHDG 579
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 134/287 (46%)
Query: 33 VDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAI 92
+D+A+ +F ++ ++ LL A+ ++ F +L +M G + TY+I
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 93 LVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG 152
+N +C ++ A L +M G+ P + + L+ G + + A +V++M++ G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 153 FVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAF 212
+ D TF +L+ + + + V + + G D+ TY +I + K G D A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 213 RLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMC 272
LL+ + + + +Y II G+ + DDAF F++M+ KG P+ Y LI+
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
GR+ +A+ L +M E + P F+ + D GK AEK+
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 1/289 (0%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV 65
E M+ +S + T S+ I F + + A+ + K ++ NSLL C
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 66 KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGR 125
A AL+ +M+ G+ PD T+ LV+ K EA ++ M KG P +
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 126 DLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCK 185
++ GL G + A ++NKM K D+ +N++I+ +CK ++ +++ +
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Query: 186 LGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDD 245
G+ DV TY LI + G +A RLL +++E P + +I + G+ +
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE 338
Query: 246 AFCFFSEMKIKGHP-PNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGL 293
A + EM H P+ Y LI + R E EM++ GL
Sbjct: 339 AEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 79/192 (41%)
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
R+ L + +L L+ A + M+K + F+ L+ I K + + + + +
Sbjct: 43 RENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 102
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
LG+ ++ TY I I + + A +L +++ G+ P ++ G +
Sbjct: 103 NLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 162
Query: 245 DAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVT 304
+A +M G+ P+ +T L+ + + EA + M G P + V
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 305 DGLKNCGKHDLA 316
+GL G+ DLA
Sbjct: 223 NGLCKRGEPDLA 234
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 138/291 (47%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S +I+ F K G + A +++++ + + Y+SL+ C A + M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
I K P+ TY L+ +C + ++ E E +EMS +G L+ G A
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
++A+ + +M+ G + D+ T++ L++ +C +G+VE + ++ + + + D+ TY I+
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + KAG +++ + L +L G KP Y ++ G R+G ++A F EMK +G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKN 309
P+ Y LI R G +A + EM + LVT+ L +
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHD 618
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 136/296 (45%), Gaps = 4/296 (1%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T +++ K G +D A+ + K + V++YN+++ ALC K + A L M
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
KG P+ TY L+ C+ G+ +A L +M ++ NP V L+ + G L
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A+++ ++MIK+ D+ T++SLI C ++ M+ + +V TY L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I KA +DE L + + G Y +I G F+ + D+A F +M G
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 259 PPNRPVYTMLIT-MCGRGGRFVEAANYLVE-MTEMGLTPISRCFDLVTDGLKNCGK 312
P+ Y++L+ +C G VE A + E + + P ++++ +G+ GK
Sbjct: 463 LPDIMTYSILLDGLCNNGK--VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 147/334 (44%), Gaps = 36/334 (10%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKG 82
II+ + V++A+ +F + + V+ YNSL+ LC + A L+ MI +
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 83 FVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAK 142
P+ T++ L++A+ GK+ EA++ EM + +P + L+ G L+ AK
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 143 QMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAV 202
M MI + ++ T+N+LI+ CK+ V+ +E++ + + GL + TY LI
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 203 SKAGMIDEAFRLLHNLVEDGHKPF---------------------------------PSL 229
+A D A + +V DG P P +
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 230 YA--PIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVE 287
Y +I+GM + G+ +D + F + +KG PN YT +++ R G EA E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 288 MTEMGLTPISRCFD-LVTDGLKNCGKHDLAEKIE 320
M E G P S ++ L+ L++ K AE I
Sbjct: 562 MKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR 595
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%)
Query: 33 VDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAI 92
+D+AV +F ++ ++ LL A+ ++ F +L +M G + TY+I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 93 LVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG 152
L+N +C ++ A L +M G+ P + + L+ G + + A +V +M++ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 153 FVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAF 212
+ D TFN+LI + + V + + G D+ TY I++ + K G ID A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 213 RLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMC 272
LL + + +P +Y II + +DA F+EM KG PN Y LI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
GR+ +A+ L +M E + P F + D GK AEK+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 133/298 (44%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I +H AV + ++ CQ ++ Y ++ LC+ A +L+++M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ P Y +++A C+ + +A EM +KG P V + L++ L N G
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A ++++ MI++ ++ TF++LI+ K G++ ++Y + K + D+ TY L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I +DEA + ++ P Y +IKG + + D+ F EM +G
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
N YT LI + A +M G+ P + ++ DGL N GK + A
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 122/258 (47%), Gaps = 6/258 (2%)
Query: 3 KTIELMKPYN----LSVSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYN 56
K +E K Y+ S+ P T S +I F H +D A +F + +C V+ YN
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 57 SLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDK 116
+L+ C+ K L R M ++G V + TY L++ + + + AQ ++M
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 117 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFC 176
G P + +L+ GL N G +E+A + + + D+ T+N +IE +CK+G+VE
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 177 VEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKG 236
+++ S+ G+ +V TY ++ + G+ +EA L + E+G P Y +I+
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 237 MFRRGQFDDAFCFFSEMK 254
R G + EM+
Sbjct: 581 HLRDGDKAASAELIREMR 598
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 121/289 (41%), Gaps = 2/289 (0%)
Query: 7 LMKPYNLSVSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
L K L P TL+ ++ F + +AV + + Q +N+L+ L
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 65 VKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG 124
A AL+ RM+ KG PD TY I+VN C G + A L++M P V
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
+ ++ L N + A + +M +G ++ T+NSLI +C G + +
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
+ + +V T+ LI A K G + EA +L +++ P Y+ +I G + D
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 245 DAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGL 293
+A F M K PN Y LI + R E EM++ GL
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 112/241 (46%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
Y+ L+ C A A++ +M++ G+ PD T L+N +C ++ +A + +M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
+ G+ P + L+ GL A +V++M+ +G DL T+ ++ +CK G+++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
+ + + + + V Y +I A+ +++A L + G +P Y +I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
+ + G++ DA S+M + PN ++ LI + G+ VEA EM + +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 295 P 295
P
Sbjct: 359 P 359
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 139/325 (42%), Gaps = 3/325 (0%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV 65
E M+ +S + T S++I F + + A+ V K + ++ NSLL C
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
Query: 66 KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGR 125
A +L+ +M+ G+ PD T+ L++ + EA + M KG P +
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 126 DLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCK 185
++V GL G ++ A ++ KM + + +N++I+ +C V + ++ +
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 186 LGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDD 245
G+ +V TY LI + G +A RLL +++E P ++ +I + G+ +
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 246 AFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTD 305
A + EM + P+ Y+ LI R EA + M P ++ +
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 306 GLKNCGKHDLAEKIELL-EVSLRSV 329
G C + E +EL E+S R +
Sbjct: 405 GF--CKAKRVDEGMELFREMSQRGL 427
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 76/184 (41%)
Query: 133 LNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADV 192
LN L+ A + M+K + F+ L+ I K + + + + + LG+ ++
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 193 STYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSE 252
TY ILI + + A +L +++ G++P ++ G + DA +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 253 MKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK 312
M G+ P+ + LI R R EA + M G P + +V +GL G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 313 HDLA 316
DLA
Sbjct: 237 IDLA 240
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 141/302 (46%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV 65
E MK L T + +I+ FGK G +D+ V F + C+ V+ YN+L+ C+
Sbjct: 286 EEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKF 345
Query: 66 KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGR 125
R M G P+ +Y+ LV+A+C G M++A +F +M G P
Sbjct: 346 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 405
Query: 126 DLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCK 185
L+ G L A ++ N+M++ G ++ T+ +LI+ +C + ++ E++ +
Sbjct: 406 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465
Query: 186 LGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDD 245
G+ ++++Y LI KA +D A LL+ L G KP LY I G+ + +
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEA 525
Query: 246 AFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTD 305
A +EMK G N +YT L+ + G E + L EM E+ + F ++ D
Sbjct: 526 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 585
Query: 306 GL 307
GL
Sbjct: 586 GL 587
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 125/288 (43%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
MK + + ++ + ++ F K G D+ F + V YN ++ +C+
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A L M +G VPD TY +++ + G++ + F +EM D P V +
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
L+ G L + +M G ++ ++++L++ CK G ++ ++ Y + ++G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
L + TY LI A K G + +AFRL + +++ G + Y +I G+ + +A
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTP 295
F +M G PN Y LI + A L E+ G+ P
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 142/306 (46%), Gaps = 1/306 (0%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ L + T + +I+ K G + +A + N+ + V+ Y +L+ LC+ +
Sbjct: 393 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A L +M G +P+ +Y L++ + + M A E L E+ +G P +
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
+ GL + +E+AK ++N+M + G + + +L++ KSG + + + +L
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVED-GHKPFPSLYAPIIKGMFRRGQFDDA 246
+ V T+ +LI + K ++ +A + + D G + +++ +I G+ + Q + A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 247 FCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDG 306
F +M KG P+R YT L+ + G +EA +M E+G+ + + G
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 307 LKNCGK 312
L +C +
Sbjct: 693 LSHCNQ 698
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 130/322 (40%), Gaps = 7/322 (2%)
Query: 1 MWKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLF 60
+W T + P V S++I+ G+++ A++ F+K F N LL
Sbjct: 181 LWSTRNVCVP-GFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 61 ALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNP 120
++ + MI G P TY I+++ C G + A+ +EM +G P
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Query: 121 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMY 180
+ ++ G G L+ +M D+ T+N+LI CK G++ +E Y
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY 355
Query: 181 YSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRR 240
+ GL +V +Y L+ A K GM+ +A + ++ G P Y +I +
Sbjct: 356 REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI 415
Query: 241 GQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCF 300
G DAF +EM G N YT LI R EA +M G+ P +
Sbjct: 416 GNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASY 475
Query: 301 DLVTDGLKNCGKHDLAEKIELL 322
+ + G D A +ELL
Sbjct: 476 NALIHGFVKAKNMDRA--LELL 495
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 1/240 (0%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKG 82
+I F K +D A+E+ N+ + +LLY + ++ LC ++ A ++ M G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 83 FVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAK 142
+ Y L++A+ SG E L EM + V +L+ GL + A
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 143 QMVNKMIKQ-GFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPA 201
N++ G + F ++I+ +CK +VE ++ + + GL D + Y L+
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 202 VSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPN 261
K G + EA L + E G K Y ++ G+ Q A F EM +G P+
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTA-FNCQQCVLLYNSLLFALC 63
++ MK ++ V+ T ++I+ K+ LV AV+ FN+ + F Q ++ +++ LC
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Query: 64 EVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVR 123
+ A L +M++KG VPD+ Y L++ G + EA +M++ G +
Sbjct: 625 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLL 684
Query: 124 GRDLLVQGLLNAGYLESAKQMVNKMIKQG 152
LV GL + L+ A+ + +MI +G
Sbjct: 685 AYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 75/179 (41%), Gaps = 26/179 (14%)
Query: 160 FNSLIETICKSGEVEFCVEMYY---SVCKLGLC--ADVSTYKILIPA----VSKAGMIDE 210
F +E+ C + FC MYY SV K + AD + +L V G+ D
Sbjct: 138 FKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDA 197
Query: 211 AFRLLHNL--VEDGHKPFPSLYAPII-------KGMFRR----GQFDDAFCFFSEMKIKG 257
F +L +L +E+ + F + + G+ R G+ DD FF +M G
Sbjct: 198 LFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAG 257
Query: 258 HPPNRPVYTMLIT-MCGRGGRFVEAANYLV-EMTEMGLTPISRCFDLVTDGLKNCGKHD 314
P Y ++I MC G VEAA L EM GL P + ++ + DG G+ D
Sbjct: 258 ARPTVFTYNIMIDCMCKEGD--VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
>sp|Q8S9D1|PP395_ARATH Pentatricopeptide repeat-containing protein At5g21222
OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1
Length = 831
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 149/308 (48%), Gaps = 7/308 (2%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV 65
E+++P + +T +++++ + ++ A + K ++ + V+ +N+L A +
Sbjct: 454 EMLQPND-----RTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 508
Query: 66 KLFHGAYALI-RRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG 124
A +I RM+ P+ RT +VN +C GKM EA F M + G +P +
Sbjct: 509 GSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFV 568
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
+ L++G LN ++ ++V+ M + G D+ TF++L+ G+++ C E+Y +
Sbjct: 569 FNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDML 628
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
+ G+ D+ + IL ++AG ++A ++L+ + + G +P +Y II G G+
Sbjct: 629 EGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMK 688
Query: 245 DAFCFFSEM-KIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLV 303
A + +M I G PN Y LI G + +A L +M + P + L+
Sbjct: 689 KAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLI 748
Query: 304 TDGLKNCG 311
DG K+ G
Sbjct: 749 ADGWKSIG 756
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 127/297 (42%), Gaps = 10/297 (3%)
Query: 29 KHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKR 88
+ G A +FN + ++ Y +L+ AL K FH +LI ++ + G PD
Sbjct: 331 ERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTI 390
Query: 89 TYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKM 148
+ ++NA SG + +A + ++M + G P + L++G G LE + ++++ M
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Query: 149 IKQGFVL-DLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGM 207
++ + + T N L++ C ++E + Y + G+ DV T+ L A ++ G
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 208 IDEAF-----RLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNR 262
A R+LHN V KP I+ G G+ ++A FF MK G PN
Sbjct: 511 TCTAEDMIIPRMLHNKV----KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNL 566
Query: 263 PVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
V+ LI + M E G+ P F + + + G E+I
Sbjct: 567 FVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 40/321 (12%)
Query: 15 VSPQTL--SLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAY 72
+ P T+ + II + G +D A+++F K C+ +N+L+ ++ +
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 73 ALIRRMIRKGFV-PDKRTYAILVNAWCSSGKMREAQEFLQEMSDKG-------FN----- 119
L+ M+R + P+ RT ILV AWC+ K+ EA + +M G FN
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 120 ------------------------PPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVL 155
P VR +V G G +E A + +M + G
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 156 DLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLL 215
+L FNSLI+ +++ E+ + + G+ DV T+ L+ A S G + +
Sbjct: 565 NLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIY 624
Query: 216 HNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRG 275
+++E G P ++ + KG R G+ + A ++M+ G PN +YT +I+
Sbjct: 625 TDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSA 684
Query: 276 GRFVEAANYLVEMTEM-GLTP 295
G +A +M + GL+P
Sbjct: 685 GEMKKAMQVYKKMCGIVGLSP 705
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 1/199 (0%)
Query: 122 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYY 181
VR R L+ GL+ G + A + N +I++G L T+ +L+ + + + +
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 182 SVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRG 241
V K GL D + +I A S++G +D+A ++ + E G KP S + +IKG + G
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 242 QFDDAFCFFSEM-KIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCF 300
+ +++ M + + PN +L+ + EA N + +M G+ P F
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 301 DLVTDGLKNCGKHDLAEKI 319
+ + G AE +
Sbjct: 499 NTLAKAYARIGSTCTAEDM 517
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 183 VCKLGL-CADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRG 241
+C G C DV + L+ + + G EA + + L+E+GHKP Y ++ + R+
Sbjct: 309 ICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQK 368
Query: 242 QFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFD 301
F S+++ G P+ ++ +I G +A +M E G P + F+
Sbjct: 369 HFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFN 428
Query: 302 LVTDGLKNCGKHDLAEKIELLEVSLRS 328
+ G GK L E LL++ LR
Sbjct: 429 TLIKGYGKIGK--LEESSRLLDMMLRD 453
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 2/233 (0%)
Query: 86 DKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMV 145
D R+ L+N G+ +EA + ++G P + LV L + S ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 146 NKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKA 205
+K+ K G D FN++I +SG ++ ++++ + + G ST+ LI K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 206 GMIDEAFRLLHNLVEDGH-KPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPV 264
G ++E+ RLL ++ D +P +++ + + ++A+ +M+ G P+
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 265 YTMLITMCGRGGRFVEAANYLV-EMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
+ L R G A + ++ M + P R + +G GK + A
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEA 550
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 18 QTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRR 77
S++ + + + G + A ++ N+ F + V++Y ++ C A + ++
Sbjct: 637 HAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKK 696
Query: 78 MIR-KGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAG 136
M G P+ TY L+ + + + +A+E L++M K P + L+ G + G
Sbjct: 697 MCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Query: 137 YLES 140
S
Sbjct: 757 VSNS 760
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 136/291 (46%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S +I+ F K G + A +++++ + + Y+SL+ C A + M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
I K P+ TY+ L+ +C + ++ E E +EMS +G L+ G A
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
++A+ + +M+ G ++ T+N L++ +CK+G++ + ++ + + + D+ TY I+
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I + KAG +++ + L NL G P Y +I G R+G ++A +MK G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKN 309
PN Y LI R G +A + EM G + LVT+ L +
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 620
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 131/294 (44%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T ++ K G +D A+ + K + V++YN+++ LC+ K A L M
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
KG PD TY+ L++ C+ G+ +A L +M ++ NP V L+ + G L
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A+++ ++MIK+ D+ T++SLI C ++ M+ + +V TY L
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I KA ++E L + + G Y +I G F+ D+A F +M G
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK 312
PN Y +L+ + G+ +A + + P ++++ +G+ GK
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 133/287 (46%)
Query: 33 VDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAI 92
VD+AV++F ++ +N LL A+ ++ F +L +M G D TY+I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 93 LVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQG 152
+N +C ++ A L +M G+ P + L+ G ++ + A +V++M++ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 153 FVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAF 212
+ D TF +LI + + V + + + G D+ TY ++ + K G ID A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 213 RLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMC 272
LL + + + +Y II G+ + DDA F+EM KG P+ Y+ LI+
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 273 GRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
GR+ +A+ L +M E + P F + D GK AEK+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 152/334 (45%), Gaps = 36/334 (10%)
Query: 23 IIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKG 82
II+ K+ +D+A+ +F + + V Y+SL+ LC + A L+ MI +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 83 FVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAK 142
P+ T++ L++A+ GK+ EA++ EM + +P + L+ G L+ AK
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 143 QMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAV 202
M MI + ++ T+++LI+ CK+ VE +E++ + + GL + TY LI
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 203 SKAGMIDEA---FR-----------LLHNLVEDG---------------------HKPFP 227
+A D A F+ L +N++ DG +P
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 228 SLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVE 287
Y +I+GM + G+ +D + F + +KG PN Y +I+ R G EA + L +
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 288 MTEMGLTPISRCFD-LVTDGLKNCGKHDLAEKIE 320
M E G P S ++ L+ L++ + AE I+
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 116/241 (48%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
Y+ + C A A++ +M++ G+ PD T + L+N +C S ++ +A + +M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
+ G+ P L+ GL A +V++M+++G DL T+ +++ +CK G+++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
+ + + K + ADV Y +I + K +D+A L + G +P Y+ +I
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
+ G++ DA S+M + PN ++ LI + G+ VEA EM + +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 295 P 295
P
Sbjct: 361 P 361
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 6/279 (2%)
Query: 3 KTIELMKPYN----LSVSPQ--TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYN 56
K +E K Y+ S+ P T S +I F H +D A +F + +C V+ Y+
Sbjct: 343 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYS 402
Query: 57 SLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDK 116
+L+ C+ K L R M ++G V + TY L++ + + AQ ++M
Sbjct: 403 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462
Query: 117 GFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFC 176
G +P + ++L+ GL G L A + + + D+ T+N +IE +CK+G+VE
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 177 VEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKG 236
E++ ++ G+ +V Y +I + G +EA LL + EDG P Y +I+
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 237 MFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRG 275
R G + + EM+ G + ++ M G
Sbjct: 583 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 136/311 (43%), Gaps = 2/311 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I H AV + ++ CQ ++ Y +++ LC+ A +L+++M
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ D Y +++ C M +A EM +KG P V L+ L N G
Sbjct: 250 EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
A ++++ MI++ ++ TF++LI+ K G++ ++Y + K + D+ TY L
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
I +DEA + ++ P Y+ +IKG + + ++ F EM +G
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEK 318
N YT LI + A +M +G+ P ++++ DGL C LA+
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL--CKNGKLAKA 487
Query: 319 IELLEVSLRSV 329
+ + E RS
Sbjct: 488 MVVFEYLQRST 498
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 140/325 (43%), Gaps = 3/325 (0%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV 65
E M+ +S T S+ I F + + A+ V K + ++ +SLL C
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 66 KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGR 125
K A AL+ +M+ G+ PD T+ L++ K EA + +M +G P +
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 126 DLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCK 185
+V GL G ++ A ++ KM K D+ +N++I+ +CK ++ + ++ +
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 186 LGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDD 245
G+ DV TY LI + G +A RLL +++E P ++ +I + G+ +
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 246 AFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTD 305
A + EM + P+ Y+ LI R EA + M P + +
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 306 GLKNCGKHDLAEKIELL-EVSLRSV 329
G C + E +EL E+S R +
Sbjct: 407 GF--CKAKRVEEGMELFREMSQRGL 429
Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 1/194 (0%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I F + DNA VF + + +L YN LL LC+ A + +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
R PD TY I++ C +GK+ + E +S KG +P V + ++ G G
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
E A ++ KM + G + + T+N+LI + G+ E E+ + G D ST L
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-L 613
Query: 199 IPAVSKAGMIDEAF 212
+ + G +D++F
Sbjct: 614 VTNMLHDGRLDKSF 627
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%)
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
R++L L + ++ A + M+K + FN L+ + K + E + + +
Sbjct: 51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
LG+ D+ TY I I + + A +L +++ G++P + ++ G +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 245 DAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVT 304
DA +M G+ P+ +T LI + EA + +M + G P + V
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 305 DGLKNCGKHDLA 316
+GL G DLA
Sbjct: 231 NGLCKRGDIDLA 242
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 4/218 (1%)
Query: 92 ILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQ 151
IL N K+ +A + +M P + + L+ + E + +M
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 152 GFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEA 211
G DL T++ I C+ ++ + + + KLG D+ T L+ + I +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 212 FRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVY-TMLIT 270
L+ +VE G+KP + +I G+F + +A +M +G P+ Y T++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 271 MCGRGGRFVEAANYLVEMTEMG-LTPISRCFDLVTDGL 307
+C RG ++ A L++ E G + ++ + DGL
Sbjct: 233 LCKRGD--IDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 123/255 (48%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
Y+ L+ L + + Y L M +G V D R Y I+++ +C GK+ +A + L+EM
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
KGF P V ++ GL L+ A + + + L++ ++SLI+ K G ++
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
+ + + GL ++ T+ L+ A+ KA I+EA ++ E P Y +I
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
G+ + +F+ AF F+ EM+ +G P+ YT +I+ + G EA G
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 295 PISRCFDLVTDGLKN 309
P S C++ + +GL N
Sbjct: 795 PDSACYNAMIEGLSN 809
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 143/300 (47%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ L + +T++++++ K +D A +F + C + + SL+ L +V
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
AY + +M+ + Y L+ + + G+ + + ++M ++ +P ++ +
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLG 187
+ + AG E + M ++ + FV D +++ LI + K+G E++YS+ + G
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 188 LCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAF 247
D Y I+I K G +++A++LL + G +P Y +I G+ + + D+A+
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 248 CFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL 307
F E K K N +Y+ LI G+ GR EA L E+ + GLTP ++ + D L
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 151/361 (41%), Gaps = 46/361 (12%)
Query: 2 WKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFA 61
WK ++ L T + +I K +D AVE+F C YN+++
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 62 LCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPP 121
F AY+L+ R KG +P Y ++ GK+ EA + +EM K P
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPN 376
Query: 122 VRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEV-EFCV--- 177
+ ++L+ L AG L++A ++ + M K G ++ T N +++ +CKS ++ E C
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 178 EMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLL---------------------- 215
EM Y VC D T+ LI + K G +D+A+++
Sbjct: 437 EMDYKVC----TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 216 --HNLVEDGHK-----------PFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNR 262
H EDGHK P L + MF+ G+ + F E+K + P+
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA 552
Query: 263 PVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLAEKIELL 322
Y++LI + G E M E G +R +++V DG CGK + A +LL
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA--YQLL 610
Query: 323 E 323
E
Sbjct: 611 E 611
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 138/324 (42%), Gaps = 3/324 (0%)
Query: 6 ELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEV 65
E +K ++ S++I K G + E+F C YN ++ C+
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 66 KLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGR 125
+ AY L+ M KGF P TY +++ ++ EA +E K V
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 126 DLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCK 185
L+ G G ++ A ++ +++++G +L T+NSL++ + K+ E+ + + S+ +
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 186 LGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDD 245
L + TY ILI + K ++AF + + G KP Y +I G+ + G +
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 246 AFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTD 305
A F K G P+ Y +I G R ++A + E GL ++ ++ D
Sbjct: 781 AGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLD 840
Query: 306 GLKNCGKHDLAEKIELLEVSLRSV 329
L K+D E+ ++ LR
Sbjct: 841 TLH---KNDCLEQAAIVGAVLRET 861
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 1/291 (0%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
++ MK +L ++ I+ FGK G VD A + F++ A + + Y S++ LC+
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 65 VKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG 124
A + + + VP Y ++ + S+GK EA L+ KG P V
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIA 345
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVC 184
+ ++ L G ++ A ++ +M K+ +L T+N LI+ +C++G+++ E+ S+
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Query: 185 KLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFD 244
K GL +V T I++ + K+ +DEA + + P + +I G+ + G+ D
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 245 DAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTP 295
DA+ + +M N VYT LI GR + +M +P
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 140/319 (43%), Gaps = 1/319 (0%)
Query: 1 MWKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLF 60
M + M+ + + +I F K G VD+A+ + ++ + + ++LYN +
Sbjct: 187 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 246
Query: 61 ALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNP 120
+ +V A+ + G PD+ TY ++ C + ++ EA E + + P
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
Query: 121 PVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMY 180
+ ++ G +AG + A ++ + +G + + +N ++ + K G+V+ ++++
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 366
Query: 181 YSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRR 240
+ K ++STY ILI + +AG +D AF L ++ + G P ++ + +
Sbjct: 367 EEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 241 GQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCF 300
+ D+A F EM K P+ + LI G+ GR +A +M + S +
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 301 DLVTDGLKNCGKHDLAEKI 319
+ N G+ + KI
Sbjct: 486 TSLIKNFFNHGRKEDGHKI 504
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%)
Query: 71 AYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQ 130
Y +++ M + F P Y L+ A+ + Q+M + G+ P V L++
Sbjct: 152 GYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIR 211
Query: 131 GLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCA 190
G G ++SA ++++M D+ +N I++ K G+V+ + ++ + GL
Sbjct: 212 GFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP 271
Query: 191 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFF 250
D TY +I + KA +DEA + +L ++ P Y +I G G+FD+A+
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
Query: 251 SEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNC 310
+ KG P+ Y ++T + G+ EA EM + P ++++ D L
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRA 390
Query: 311 GKHDLA 316
GK D A
Sbjct: 391 GKLDTA 396
Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 111/269 (41%), Gaps = 3/269 (1%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
Y +L+ A V L ++M G+ P + L+ + G++ A L EM
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
+ + ++ + G ++ A + +++ G D T+ S+I +CK+ ++
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 175 FCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPII 234
VEM+ + K Y +I AG DEA+ LL G P Y I+
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 235 KGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLT 294
+ + G+ D+A F EMK K PN Y +LI M R G+ A M + GL
Sbjct: 351 TCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 295 PISRCFDLVTDGLKNCGKHDLAEKIELLE 323
P R +++ D L C L E + E
Sbjct: 410 PNVRTVNIMVDRL--CKSQKLDEACAMFE 436
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 109/270 (40%)
Query: 50 QCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEF 109
C YNSLL + + F ++ M GF P T +V + K+RE +
Sbjct: 96 HCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDV 155
Query: 110 LQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICK 169
+Q M F P L+ + + + +M + G+ + F +LI K
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 170 SGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSL 229
G V+ + + + L AD+ Y + I + K G +D A++ H + +G KP
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 230 YAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMT 289
Y +I + + + D+A F ++ P Y +I G G+F EA + L
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 290 EMGLTPISRCFDLVTDGLKNCGKHDLAEKI 319
G P ++ + L+ GK D A K+
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 95/245 (38%), Gaps = 35/245 (14%)
Query: 2 WKTIELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFA 61
++ +E MK + T +I+ K +D A +F + + + V++Y+SL+
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 62 LCEVKLFHGAYALIRRMIRKGF-----------------------------------VPD 86
+V AY ++ +++KG P+
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 87 KRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVN 146
+ TY IL+N C K +A F QEM +G P ++ GL AG + A + +
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 147 KMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAG 206
+ G V D +N++IE + ++ + GL T +L+ + K
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKND 846
Query: 207 MIDEA 211
+++A
Sbjct: 847 CLEQA 851
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 153/327 (46%), Gaps = 16/327 (4%)
Query: 8 MKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKL 67
M+ +S++ T + +I+ F K G + A E++++ + L+Y +++ +
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 68 FHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDL 127
A + +M+ +G D Y ++++ C +GK++EA E +++M P +
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 128 LVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGE-----VEFCVEMYYS 182
++ +G +++A M +K+I++GF D+ +++I+ I K+G+ V FC+E
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK--- 400
Query: 183 VCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQ 242
A+ Y +LI A+ K G E RL + E G P +Y I G+ ++G
Sbjct: 401 -------ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN 453
Query: 243 FDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDL 302
DAF + M +G + YT LI G VEA EM G++P S FDL
Sbjct: 454 LVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDL 513
Query: 303 VTDGLKNCGKHDLAEKIELLEVSLRSV 329
+ + G A + LL++ R +
Sbjct: 514 LIRAYEKEGNMAAASDL-LLDMQRRGL 539
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 5/277 (1%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T S I+ F K G + A++ F+ V+ + L+ C+ A +L + M
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
R + TY L++ +C G+M+ A+E M + P ++ G G
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDS 284
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
++A + + KM+ QG LD+ + +I +C +G+++ E+ + K L D+ + +
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
+ A K+G + A + H L+E G +P + +I G+ + GQ +A +F K
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK---- 400
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTP 295
N +YT+LI + G F+E +++E GL P
Sbjct: 401 -ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 123/276 (44%), Gaps = 1/276 (0%)
Query: 37 VEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNA 96
+E F C+ ++ +NSL ++K+ + + M+ K P+ TY+ ++
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDT 172
Query: 97 WCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLD 156
+C SG+++ A + M +P V L+ G AG LE A + +M + L+
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 157 LETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLH 216
+ T+ +LI+ CK GE++ EMY + + + + Y +I + G D A + L
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 217 NLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGG 276
++ G + + Y II G+ G+ +A +M+ P+ ++T ++ + G
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 277 RFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK 312
R A N ++ E G P + DG+ G+
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ 388
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 6/271 (2%)
Query: 29 KHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM-IRKGFV--P 85
K G V A ++ + F C+ V+ YNSL+ C A ++ + GF+ P
Sbjct: 68 KLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKP 127
Query: 86 DKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMV 145
D ++ L N + + E ++ M K +P V + +G L+ A +
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALKSF 186
Query: 146 NKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKA 205
+ M + ++ TF LI+ CK+G++E V +Y + ++ + +V TY LI K
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 206 GMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVY 265
G + A + +VED +P +Y II G F+RG D+A F ++M +G + Y
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306
Query: 266 TMLIT-MCGRGGRFVEAANYLVEMTEMGLTP 295
++I+ +CG G+ EA + +M + L P
Sbjct: 307 GVIISGLCG-NGKLKEATEIVEDMEKSDLVP 336
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 4/244 (1%)
Query: 78 MIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGY 137
++ +G+ P + ++ +V+ C G+++ A++ + M G P V + L+ G G
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 138 LESAKQMVNKM-IKQGFVL--DLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVST 194
+ SA ++ + GF+ D+ +FNSL K ++ V +Y V +V T
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVVT 165
Query: 195 YKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMK 254
Y I K+G + A + H++ D P + +I G + G + A + EM+
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 255 IKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHD 314
N YT LI + G A M E + P S + + DG G D
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 315 LAEK 318
A K
Sbjct: 286 NAMK 289
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 5/175 (2%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
LS +I+ K+G + A+ F A + ++Y L+ ALC+ F L ++
Sbjct: 375 ALSTMIDGIAKNGQLHEAIVYFCIEKAND-----VMYTVLIDALCKEGDFIEVERLFSKI 429
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
G VPDK Y + C G + +A + M +G + L+ GL + G +
Sbjct: 430 SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLM 489
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVS 193
A+Q+ ++M+ G D F+ LI K G + ++ + + GL VS
Sbjct: 490 VEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 52 VLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQ 111
+L Y +L++ L L A + M+ G PD + +L+ A+ G M A + L
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
Query: 112 EMSDKGFNPPVRGRD 126
+M +G V D
Sbjct: 533 DMQRRGLVTAVSDAD 547
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%)
Query: 19 TLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALIRRM 78
T + +I + K G V A E+ C+ V +N L+ LC V + A L++RM
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 79 IRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYL 138
+ G PD +Y +L++ C G M A + L M+ P ++ G
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 139 ESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKIL 198
+ A + M+++G LD T +LI+ +CK G+ + + ++ K+ + + ++
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 199 IPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGH 258
+ +SK + E +L + + G P Y ++ G+ R G +F MK+ G
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 259 PPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHDLA 316
PN YT++I + GR EA L M + G++P + ++ G N GK D A
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 1/279 (0%)
Query: 35 NAVEVFNKCTA-FNCQQCVLLYNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAIL 93
+A++VF+ + C + Y+ L+ LCEV A+ L +M KG P RTY +L
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 94 VNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGF 153
+ A C G + +A EM +G P V +L+ GL G +E A + KM+K
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 154 VLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFR 213
+ T+N+LI CK G V E+ + K +V T+ L+ + + G +A
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 214 LLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCG 273
LL ++++G P Y +I G+ R G + A+ S M P+ +T +I
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 274 RGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGK 312
+ G+ A+ +L M G++ + DG+ GK
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 4/310 (1%)
Query: 16 SPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHGAYALI 75
S +T +++I+ GL+D A +F++ C+ V Y L+ LC A +
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 76 RRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQGLLNA 135
R+M++ P TY L+N +C G++ A E L M + P VR + L++GL
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 136 GYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCADVSTY 195
G A ++ +M+ G D+ ++N LI+ +C+ G + ++ S+ + D T+
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 196 KILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKI 255
+I A K G D A L ++ G +I G+ + G+ DA F E +
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL-FILETLV 538
Query: 256 KGHPPNRP-VYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGLKNCGKHD 314
K P +++ M +G + E L ++ ++GL P + + DGL G D
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG--D 596
Query: 315 LAEKIELLEV 324
+ +LE+
Sbjct: 597 ITGSFRILEL 606
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 144/308 (46%), Gaps = 4/308 (1%)
Query: 13 LSVSPQTLS--LIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCEVKLFHG 70
++ +P ++S ++I + G ++ A + ++ CQ Y L+ ALC+ L
Sbjct: 260 VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK 319
Query: 71 AYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRGRDLLVQ 130
A+ L MI +G P+ TY +L++ C GK+ EA ++M P V + L+
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 131 GLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVEMYYSVCKLGLCA 190
G G + A +++ M K+ ++ TFN L+E +C+ G+ V + + GL
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 191 DVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFF 250
D+ +Y +LI + + G ++ A++LL ++ +P + II ++G+ D A F
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 251 SEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGLTPISRCFDLVTDGL-KN 309
M KG + T LI + G+ +A L + +M + +++ D L K
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKG 559
Query: 310 CG-KHDLA 316
C K +LA
Sbjct: 560 CKVKEELA 567
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 119/271 (43%), Gaps = 38/271 (14%)
Query: 55 YNSLLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMS 114
Y+SLL +L ++ L AY RRM GFV Y +VNA C +G
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNG------------- 209
Query: 115 DKGFNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVE 174
Y E+A+ ++K++K GFVLD SL+ C+ +
Sbjct: 210 ----------------------YTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLR 247
Query: 175 FCVEMYYSVCKLGLCADVS-TYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPI 233
++++ + K CA S +Y ILI + + G ++EAF L + E G +P Y +
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 234 IKGMFRRGQFDDAFCFFSEMKIKGHPPNRPVYTMLITMCGRGGRFVEAANYLVEMTEMGL 293
IK + RG D AF F EM +G PN YT+LI R G+ EA +M + +
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 294 TPISRCFDLVTDGLKNCGKHDLAEKIELLEV 324
P ++ + +G C + ELL V
Sbjct: 368 FPSVITYNALINGY--CKDGRVVPAFELLTV 396
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 127/271 (46%), Gaps = 3/271 (1%)
Query: 2 WKTIELMKP-YNLSVSPQTLS--LIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSL 58
+K + L+K + +SP +S ++I+ + G ++ A ++ + F+ + L + ++
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 59 LFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGF 118
+ A C+ A A + M+RKG D+ T L++ C GK R+A L+ +
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 119 NPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCVE 178
++++ L ++ M+ K+ K G V + T+ +L++ + +SG++
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602
Query: 179 MYYSVCKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVEDGHKPFPSLYAPIIKGMF 238
+ + G +V Y I+I + + G ++EA +LL + + G P Y ++KG
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 239 RRGQFDDAFCFFSEMKIKGHPPNRPVYTMLI 269
G+ D A M +G+ N +Y+ L+
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 30/242 (12%)
Query: 5 IELMKPYNLSVSPQTLSLIIEEFGKHGLVDNAVEVFNKCTAFNCQQCVLLYNSLLFALCE 64
+E + + +P +L++I++ K V + + K V+ Y +L+ L
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 65 VKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKGFNPPVRG 124
G++ ++ M G +P+ Y I++N C G++ EA++ L M D G +P
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 125 RDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIE-------TICKSGEVEF-- 175
++V+G +N G L+ A + V M+++G+ L+ ++SL++ I S E
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSD 713
Query: 176 ---------CVEMYYSV------CKLGLCADVSTYKILIPAVSKAGMIDEAFRLLHNLVE 220
C+ SV C GLC L+ + K G DE+ L+ N++E
Sbjct: 714 IALRETDPECINELISVVEQLGGCISGLCI------FLVTRLCKEGRTDESNDLVQNVLE 767
Query: 221 DG 222
G
Sbjct: 768 RG 769
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 58 LLFALCEVKLFHGAYALIRRMIRKGFVPDKRTYAILVNAWCSSGKMREAQEFLQEMSDKG 117
L+ LC+ + L++ ++ +G +K I++ ++CS K + E + + G
Sbjct: 745 LVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSG 803
Query: 118 FNPPVRGRDLLVQGLLNAGYLESAKQMVNKMIKQGFVLDLETFNSLIETICKSGEVEFCV 177
F P + L++QGL G E A+++V +++ V++ + +E + + E C
Sbjct: 804 FVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCS 863
Query: 178 EM 179
E+
Sbjct: 864 EV 865
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,334,881
Number of Sequences: 539616
Number of extensions: 5077098
Number of successful extensions: 20064
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 14508
Number of HSP's gapped (non-prelim): 2703
length of query: 329
length of database: 191,569,459
effective HSP length: 118
effective length of query: 211
effective length of database: 127,894,771
effective search space: 26985796681
effective search space used: 26985796681
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)